Taeniopygia guttata isolate Blue55 chromosome 36, bTaeGut1.4.pri, whole genome shotgun sequence.
type: Entry
definition: Taeniopygia guttata isolate Blue55 chromosome 36, bTaeGut1.4.pri, whole genome shotgun sequence.
sequence version: NC_054768.1
sequence date: 2021-05-26
sequence: sequence
division: CON
label: NC_054768.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA558048
dblink: SAMN02981239
keyword: WGS
keyword: RefSeq
source: Taeniopygia guttata (zebra finch)
organism: Taeniopygia guttata
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Taeniopygia.
reference: 1
references: 33911273
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM025865.2.\nAssembly name: bTaeGut1.4.pri\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2021/05/04. The original whole-genome shotgun project has the\naccession RRCB00000000.2.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 09-APR-2021\nAssembly Method :: FALCON v. 5.1.1; FALCON unzip v.\n Nov2017(uc4); Purge_dups v. 1.0.1;\n Scaff10X v. 4.1.0; Bionano Solve\n BspQI/BssSI v. 3.4; Salsa2 v. 2.2.; Arrow\n polishing v. variantCaller 2.3.3; Merfin\n filtering v. 0.1; longranger align v.\n 2.2.2; freebayes polishing v. 1.3.1;\n gEVAL manual curation v. 2021-04-09; VGP\n pipeline v. 1.7\nAssembly Name :: bTaeGut1.4.pri\nDiploid :: Principal Pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 88.2x\nSequencing Technology :: PacBio RSII; 10X Genomics linked reads;\n Bionano Genomics two enzymes; Arima\n Genomics Hi-C\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Taeniopygia guttata Annotation\n Release 106\nAnnotation Version :: 106\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.6\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 1020380
topology: linear
so has quality: SO_0000987
location: 1..1020380
location: region:1-1020380:1
RO_0002162: 59729

NC_054768
type: RefSeq
SIO_000068: refseq

PRJNA558048
type: BioProject
SIO_000068: bioproject

SAMN02981239
type: BioSample
SIO_000068: biosample

1
title: Towards complete and error-free genome assemblies of all vertebrate species
author: Rhie, A.
author: McCarthy, S.A.
author: Fedrigo, O.
author: Damas, J.
author: Formenti, G.
author: Koren, S.
author: Uliano-Silva, M.
author: Chow, W.
author: Fungtammasan, A.
author: Kim, J.
author: Lee, C.
author: Ko, B.J.
author: Chaisson, M.
author: Gedman, G.L.
author: Cantin, L.J.
author: Thibaud-Nissen, F.
author: Haggerty, L.
author: Bista, I.
author: Smith, M.
author: Haase, B.
author: Mountcastle, J.
author: Winkler, S.
author: Paez, S.
author: Howard, J.
author: Vernes, S.C.
author: Lama, T.M.
author: Grutzner, F.
author: Warren, W.C.
author: Balakrishnan, C.N.
author: Burt, D.
author: George, J.M.
author: Biegler, M.T.
author: Iorns, D.
author: Digby, A.
author: Eason, D.
author: Robertson, B.
author: Edwards, T.
author: Wilkinson, M.
author: Turner, G.
author: Meyer, A.
author: Kautt, A.F.
author: Franchini, P.
author: Detrich, H.W. 3rd
author: Svardal, H.
author: Wagner, M.
author: Naylor, G.J.P.
author: Pippel, M.
author: Malinsky, M.
author: Mooney, M.
author: Simbirsky, M.
author: Hannigan, B.T.
author: Pesout, T.
author: Houck, M.
author: Misuraca, A.
author: Kingan, S.B.
author: Hall, R.
author: Kronenberg, Z.
author: Sovic, I.
author: Dunn, C.
author: Ning, Z.
author: Hastie, A.
author: Lee, J.
author: Selvaraj, S.
author: Green, R.E.
author: Putnam, N.H.
author: Gut, I.
author: Ghurye, J.
author: Garrison, E.
author: Sims, Y.
author: Collins, J.
author: Pelan, S.
author: Torrance, J.
author: Tracey, A.
author: Wood, J.
author: Dagnew, R.E.
author: Guan, D.
author: London, S.E.
author: Clayton, D.F.

33911273
type: PubMed
SIO_000068: pubmed

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1020380:1
position: 1020380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-1020380:1:source
so part of: sequence
organism: Taeniopygia guttata
mol type: genomic DNA
isolate: Blue55
chromosome: 36
sex: female
tissue type: Muscle, blood, brain
dev stage: adult
country: USA
lat lon: 36.0014 N 78.9382 W
collected by: Matt Biegler, Duke University and Rockefeller University

59729
type: Taxonomy
SIO_000068: taxonomy

PIP4P1
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: PIP4P1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4252..8524
location: region:4252-8524:1
so has part: feature:4252-8524:1:exon
subclass of: SO_0000010

121468777
type: Gene
SIO_000068: ncbigene

position:4252:1
position: 4252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8524:1
position: 8524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4252-8524:1:exon

PIP4P1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: PIP4P1
product: phosphatidylinositol-4,5-bisphosphate 4-phosphatase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_041712869.1
SIO_010081: PIP4P1
subclass of: SO_0000673
so part of: PIP4P1
location: join(4252..4484,4580..4755,5245..5351,6110..6215,6297..6349,6451..6541,7423..8524)
location: region:4252-8524:1
so has part: feature:4252-4484:1:exon
so has part: feature:4580-4755:1:exon
so has part: feature:5245-5351:1:exon
so has part: feature:6110-6215:1:exon
so has part: feature:6297-6349:1:exon
so has part: feature:6451-6541:1:exon
so has part: feature:7423-8524:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4252-4484:1:exon

position:4484:1
position: 4484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4580-4755:1:exon

position:4580:1
position: 4580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4755:1
position: 4755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5245-5351:1:exon

position:5245:1
position: 5245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5351:1
position: 5351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6110-6215:1:exon

position:6110:1
position: 6110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6215:1
position: 6215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6297-6349:1:exon

position:6297:1
position: 6297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6349:1
position: 6349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6451-6541:1:exon

position:6451:1
position: 6451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6541:1
position: 6541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7423-8524:1:exon

position:7423:1
position: 7423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PIP4P1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 59729
gene: PIP4P1
product: phosphatidylinositol-4,5-bisphosphate 4-phosphatase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_005978572.1
SIO_010081: PIP4P1
so part of: PIP4P1
location: join(4252..4484,4580..4755,5245..5351,6110..6215,6297..6349,6451..6541,7423..7809,7961..8524)
location: region:4252-8524:1
so has part: feature:4252-4484:1:exon
so has part: feature:4580-4755:1:exon
so has part: feature:5245-5351:1:exon
so has part: feature:6110-6215:1:exon
so has part: feature:6297-6349:1:exon
so has part: feature:6451-6541:1:exon
so has part: feature:7423-7809:1:exon
so has part: feature:7961-8524:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4252-4484:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4580-4755:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5245-5351:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6110-6215:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6297-6349:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6451-6541:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7423-7809:1:exon

position:7809:1
position: 7809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7961-8524:1:exon

position:7961:1
position: 7961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PIP4P1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: PIP4P1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: type 1 phosphatidylinositol 4,5-bisphosphate 4-phosphatase
translation: MADGERSPLLPPEAGPGPGGAAAAGGGGAEPGEAPPPFSPLGSPEAAGAGPPAVTCRVCQRPISVEGKAHQHVVKCGGCGEATPIRTAPGGKKYVRCPCNCLLVCRASAQRIACPRPYCKRIINLGPVHSGAPSPDPPPGGVRVACAHCGGPFLWAELPDRSLARCPHCRKVSAIGRRFPRRRCLCCLMGALLMGGAAAGLAAGTWWLWRRARWVPAAWAVLGAGAGACLLRAAYWGCVRVSQPLPPRA
SIO_010081: PIP4P1
subclass of: SO_0000673
so part of: PIP4P1
location: join(4412..4484,4580..4755,5245..5351,6110..6215,6297..6349,6451..6541,7423..7566)
location: region:4412-7566:1
so has part: feature:4412-4484:1:exon
so has part: feature:4580-4755:1:exon
so has part: feature:5245-5351:1:exon
so has part: feature:6110-6215:1:exon
so has part: feature:6297-6349:1:exon
so has part: feature:6451-6541:1:exon
so has part: feature:7423-7566:1:exon

XP_041568803.1
type: Protein
SIO_000068: ncbiprotein

position:4412:1
position: 4412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7566:1
position: 7566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4412-4484:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4580-4755:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5245-5351:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6110-6215:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6297-6349:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6451-6541:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7423-7566:1:exon

APEX1
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: APEX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8520..16101)
location: region:8520-16101:-1
so has part: feature:8520-16101:-1:exon
subclass of: SO_0000010

121468776
type: Gene
SIO_000068: ncbigene

position:8520:-1
position: 8520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16101:-1
position: 16101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8520-16101:-1:exon

APEX1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 59729
gene: APEX1
product: apurinic/apyrimidinic endodeoxyribonuclease 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XR_005978571.1
SIO_010081: APEX1
so part of: APEX1
location: complement(join(8520..9167,9346..10578,12518..12710,14297..14454,15265..15338,16026..16101))
location: region:8520-16101:-1
so has part: feature:16026-16101:-1:exon
so has part: feature:15265-15338:-1:exon
so has part: feature:14297-14454:-1:exon
so has part: feature:12518-12710:-1:exon
so has part: feature:9346-10578:-1:exon
so has part: feature:8520-9167:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16026-16101:-1:exon

position:16026:-1
position: 16026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:15265-15338:-1:exon

position:15265:-1
position: 15265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15338:-1
position: 15338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:14297-14454:-1:exon

position:14297:-1
position: 14297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14454:-1
position: 14454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:12518-12710:-1:exon

position:12518:-1
position: 12518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12710:-1
position: 12710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9346-10578:-1:exon

position:9346:-1
position: 9346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10578:-1
position: 10578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8520-9167:-1:exon

position:9167:-1
position: 9167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

APEX1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: APEX1
product: apurinic/apyrimidinic endodeoxyribonuclease 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 78 samples with support for all annotated introns
transcript id: XM_041712867.1
SIO_010081: APEX1
subclass of: SO_0000673
so part of: APEX1
location: complement(join(8520..10578,12518..12710,14297..14454,15265..15338,16026..16101))
location: region:8520-16101:-1
so has part: feature:16026-16101:-1:exon
so has part: feature:15265-15338:-1:exon
so has part: feature:14297-14454:-1:exon
so has part: feature:12518-12710:-1:exon
so has part: feature:8520-10578:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16026-16101:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:15265-15338:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:14297-14454:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12518-12710:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8520-10578:-1:exon

APEX1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: APEX1
product: apurinic/apyrimidinic endodeoxyribonuclease 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_041712868.1
SIO_010081: APEX1
subclass of: SO_0000673
so part of: APEX1
location: complement(join(8520..10578,12518..12710,14297..14454,15265..15338,15990..16063))
location: region:8520-16063:-1
so has part: feature:15990-16063:-1:exon
so has part: feature:15265-15338:-1:exon
so has part: feature:14297-14454:-1:exon
so has part: feature:12518-12710:-1:exon
so has part: feature:8520-10578:-1:exon

position:16063:-1
position: 16063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15990-16063:-1:exon

position:15990:-1
position: 15990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:15265-15338:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:14297-14454:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12518-12710:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8520-10578:-1:exon

APEX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: APEX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA-(apurinic or apyrimidinic site) endonuclease
translation: MPKRGKKKEEEEESGGDGTGPSPAKAARACPAPPYEDPPPREATPEGRRWTLKVSSWNVDGLRAWLRKGGAQWVQEEAPDVLCLQETKCAAAAVPAEVRALPGLPHQFWCSAKDRPGYSGVGLLARSEPLDVTYGIGDPEHDADGRVLTAEFPSLFVVCAYVPNAGRGLVRLEPRLRFDAAFLQFLRRLDARKPVLLCGDLNVAHADIDLCHPRANRASPGFTPQERDGFSRLLAAGFVDSFRHLYPAARGAFTFWTYLGGARARNVGWRLDYAVVSQRLLGALCDSKIRNTVPGSDHCPITALLAV
SIO_010081: APEX1
subclass of: SO_0000673
so part of: APEX1
location: complement(join(10064..10578,12518..12710,14297..14454,15265..15322))
location: region:10064-15322:-1
so has part: feature:15265-15322:-1:exon
so has part: feature:14297-14454:-1:exon
so has part: feature:12518-12710:-1:exon
so has part: feature:10064-10578:-1:exon

XP_041568801.1
type: Protein
SIO_000068: ncbiprotein

position:10064:-1
position: 10064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15322:-1
position: 15322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15265-15322:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:14297-14454:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:12518-12710:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10064-10578:-1:exon

APEX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: APEX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA-(apurinic or apyrimidinic site) endonuclease
translation: MPKRGKKKEEEEESGGDGTGPSPAKAARACPAPPYEDPPPREATPEGRRWTLKVSSWNVDGLRAWLRKGGAQWVQEEAPDVLCLQETKCAAAAVPAEVRALPGLPHQFWCSAKDRPGYSGVGLLARSEPLDVTYGIGDPEHDADGRVLTAEFPSLFVVCAYVPNAGRGLVRLEPRLRFDAAFLQFLRRLDARKPVLLCGDLNVAHADIDLCHPRANRASPGFTPQERDGFSRLLAAGFVDSFRHLYPAARGAFTFWTYLGGARARNVGWRLDYAVVSQRLLGALCDSKIRNTVPGSDHCPITALLAV
SIO_010081: APEX1
subclass of: SO_0000673
so part of: APEX1
location: complement(join(10064..10578,12518..12710,14297..14454,15265..15322))
location: region:10064-15322:-1
so has part: feature:15265-15322:-1:exon
so has part: feature:14297-14454:-1:exon
so has part: feature:12518-12710:-1:exon
so has part: feature:10064-10578:-1:exon

XP_041568802.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15265-15322:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:14297-14454:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:12518-12710:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10064-10578:-1:exon

OSGEP
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: OSGEP
note: O-sialoglycoprotein endopeptidase; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: 16252..24558
location: region:16252-24558:1
so has part: feature:16252-24558:1:exon
subclass of: SO_0000010

100190637
type: Gene
SIO_000068: ncbigene

position:16252:1
position: 16252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24558:1
position: 24558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16252-24558:1:exon

OSGEP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: OSGEP
product: O-sialoglycoprotein endopeptidase
inference: similar to RNA sequence, mRNA (same species):RefSeq:NM_001245609.2
exception: annotated by transcript or proteomic data
note: The RefSeq transcript has 25 substitutions compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001245609.2
SIO_010081: OSGEP
subclass of: SO_0000673
so part of: OSGEP
location: join(16252..16386,16473..16592,18394..18569,19913..20008,20105..20154,21936..22014,22792..22857,23801..23891,24141..24216,24291..24389,24467..24558)
location: region:16252-24558:1
so has part: feature:16252-16386:1:exon
so has part: feature:16473-16592:1:exon
so has part: feature:18394-18569:1:exon
so has part: feature:19913-20008:1:exon
so has part: feature:20105-20154:1:exon
so has part: feature:21936-22014:1:exon
so has part: feature:22792-22857:1:exon
so has part: feature:23801-23891:1:exon
so has part: feature:24141-24216:1:exon
so has part: feature:24291-24389:1:exon
so has part: feature:24467-24558:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16252-16386:1:exon

position:16386:1
position: 16386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:16473-16592:1:exon

position:16473:1
position: 16473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16592:1
position: 16592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:18394-18569:1:exon

position:18394:1
position: 18394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18569:1
position: 18569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:19913-20008:1:exon

position:19913:1
position: 19913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20008:1
position: 20008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:20105-20154:1:exon

position:20105:1
position: 20105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20154:1
position: 20154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:21936-22014:1:exon

position:21936:1
position: 21936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22014:1
position: 22014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:22792-22857:1:exon

position:22792:1
position: 22792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22857:1
position: 22857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:23801-23891:1:exon

position:23801:1
position: 23801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23891:1
position: 23891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:24141-24216:1:exon

position:24141:1
position: 24141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24216:1
position: 24216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:24291-24389:1:exon

position:24291:1
position: 24291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24389:1
position: 24389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:24467-24558:1:exon

position:24467:1
position: 24467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

OSGEP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: OSGEP
inference: similar to AA sequence (same species):RefSeq:NP_001232538.1
exception: annotated by transcript or proteomic data
note: The RefSeq protein has 10 substitutions compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: probable tRNA N6-adenosine threonylcarbamoyltransferase
translation: MPTVLGLEGSANKVGAGVVRDGAVLSNRRATYVTPPGHGFAPGPTGRHHRAAVLGLVRDALRDAGVEPRELDGVAFTRGPGMGAPLAVVAAVARTLAQLWGRPXATVNHRVGHIEMGRQQGAAPDPLVLYVSGGNTQVIAYARRRYRILGETLDVALGNCIDRLARLLQIPNAPSPGYNVEQLAKRGRRLLPLPYVVKGLDVSFSGLLSHLQAVTPKLLQSGEATPEDLCFSLQETAFAALAEVTERALALTRARHLLLVGGVACNHRLQEMLRVMCHARGAELCPVDDRYCIDNGAMIAQAGCEMPRAGQVTELSQSGITQRYRTDEVEVTWRD
SIO_010081: OSGEP
subclass of: SO_0000673
so part of: OSGEP
location: join(16272..16386,16473..16592,18394..18569,19913..20008,20105..20154,21936..22014,22792..22857,23801..23891,24141..24216,24291..24389,24467..24506)
location: region:16272-24506:1
so has part: feature:16272-16386:1:exon
so has part: feature:16473-16592:1:exon
so has part: feature:18394-18569:1:exon
so has part: feature:19913-20008:1:exon
so has part: feature:20105-20154:1:exon
so has part: feature:21936-22014:1:exon
so has part: feature:22792-22857:1:exon
so has part: feature:23801-23891:1:exon
so has part: feature:24141-24216:1:exon
so has part: feature:24291-24389:1:exon
so has part: feature:24467-24506:1:exon

NP_001232538.1
type: Protein
SIO_000068: ncbiprotein

position:16272:1
position: 16272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24506:1
position: 24506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16272-16386:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:16473-16592:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:18394-18569:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:19913-20008:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:20105-20154:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:21936-22014:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:22792-22857:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:23801-23891:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:24141-24216:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:24291-24389:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:24467-24506:1:exon

TTC5
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: TTC5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 24778..37150
location: region:24778-37150:1
so has part: feature:24778-37150:1:exon
subclass of: SO_0000010

115493046
type: Gene
SIO_000068: ncbigene

position:24778:1
position: 24778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37150:1
position: 37150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24778-37150:1:exon

TTC5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: TTC5
product: tetratricopeptide repeat domain 5, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_041712861.1
SIO_010081: TTC5
subclass of: SO_0000673
so part of: TTC5
location: join(24778..25787,28125..28335,29341..29555,30308..30497,31164..31255,32440..32496,33320..33466,34608..34795,35412..35556,36870..37150)
location: region:24778-37150:1
so has part: feature:24778-25787:1:exon
so has part: feature:28125-28335:1:exon
so has part: feature:29341-29555:1:exon
so has part: feature:30308-30497:1:exon
so has part: feature:31164-31255:1:exon
so has part: feature:32440-32496:1:exon
so has part: feature:33320-33466:1:exon
so has part: feature:34608-34795:1:exon
so has part: feature:35412-35556:1:exon
so has part: feature:36870-37150:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:24778-25787:1:exon

position:25787:1
position: 25787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:28125-28335:1:exon

position:28125:1
position: 28125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28335:1
position: 28335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:29341-29555:1:exon

position:29341:1
position: 29341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29555:1
position: 29555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:30308-30497:1:exon

position:30308:1
position: 30308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30497:1
position: 30497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:31164-31255:1:exon

position:31164:1
position: 31164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31255:1
position: 31255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:32440-32496:1:exon

position:32440:1
position: 32440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32496:1
position: 32496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:33320-33466:1:exon

position:33320:1
position: 33320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33466:1
position: 33466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:34608-34795:1:exon

position:34608:1
position: 34608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34795:1
position: 34795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:35412-35556:1:exon

position:35412:1
position: 35412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35556:1
position: 35556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:36870-37150:1:exon

position:36870:1
position: 36870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TTC5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: TTC5
product: tetratricopeptide repeat domain 5, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_041712856.1
SIO_010081: TTC5
subclass of: SO_0000673
so part of: TTC5
location: join(24778..25787,28125..28335,29341..29555,30308..30468,30539..30567,31164..31255,32440..32496,33320..33466,34608..34795,35412..35556,36870..37150)
location: region:24778-37150:1
so has part: feature:24778-25787:1:exon
so has part: feature:28125-28335:1:exon
so has part: feature:29341-29555:1:exon
so has part: feature:30308-30468:1:exon
so has part: feature:30539-30567:1:exon
so has part: feature:31164-31255:1:exon
so has part: feature:32440-32496:1:exon
so has part: feature:33320-33466:1:exon
so has part: feature:34608-34795:1:exon
so has part: feature:35412-35556:1:exon
so has part: feature:36870-37150:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:24778-25787:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:28125-28335:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:29341-29555:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:30308-30468:1:exon

position:30468:1
position: 30468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:30539-30567:1:exon

position:30539:1
position: 30539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30567:1
position: 30567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:31164-31255:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:32440-32496:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:33320-33466:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:34608-34795:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:35412-35556:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:36870-37150:1:exon

TTC5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: TTC5
product: tetratricopeptide repeat domain 5, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_041712858.1
SIO_010081: TTC5
subclass of: SO_0000673
so part of: TTC5
location: join(24778..25787,28125..28335,29341..29555,30308..30468,30539..30567,31164..31255,32440..32496,33320..33466,35412..35556,36870..37150)
location: region:24778-37150:1
so has part: feature:24778-25787:1:exon
so has part: feature:28125-28335:1:exon
so has part: feature:29341-29555:1:exon
so has part: feature:30308-30468:1:exon
so has part: feature:30539-30567:1:exon
so has part: feature:31164-31255:1:exon
so has part: feature:32440-32496:1:exon
so has part: feature:33320-33466:1:exon
so has part: feature:35412-35556:1:exon
so has part: feature:36870-37150:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:24778-25787:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:28125-28335:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:29341-29555:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:30308-30468:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:30539-30567:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:31164-31255:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:32440-32496:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:33320-33466:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:35412-35556:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:36870-37150:1:exon

TTC5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: TTC5
product: tetratricopeptide repeat domain 5, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_041712857.1
SIO_010081: TTC5
subclass of: SO_0000673
so part of: TTC5
location: join(24778..25787,28125..28335,29341..29555,30308..30468,30539..30567,31164..31255,32440..32496,33320..33466,34608..34795,35412..35556,36689..36805)
location: region:24778-36805:1
so has part: feature:24778-25787:1:exon
so has part: feature:28125-28335:1:exon
so has part: feature:29341-29555:1:exon
so has part: feature:30308-30468:1:exon
so has part: feature:30539-30567:1:exon
so has part: feature:31164-31255:1:exon
so has part: feature:32440-32496:1:exon
so has part: feature:33320-33466:1:exon
so has part: feature:34608-34795:1:exon
so has part: feature:35412-35556:1:exon
so has part: feature:36689-36805:1:exon

position:36805:1
position: 36805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24778-25787:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:28125-28335:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:29341-29555:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:30308-30468:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:30539-30567:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:31164-31255:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:32440-32496:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:33320-33466:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:34608-34795:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:35412-35556:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:36689-36805:1:exon

position:36689:1
position: 36689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TTC5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: TTC5
product: tetratricopeptide repeat domain 5, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041712860.1
SIO_010081: TTC5
subclass of: SO_0000673
so part of: TTC5
location: join(24778..25787,28125..28335,29341..29555,30308..30468,30539..30567,31164..31255,32440..32496,33320..33466,34343..34436)
location: region:24778-34436:1
so has part: feature:24778-25787:1:exon
so has part: feature:28125-28335:1:exon
so has part: feature:29341-29555:1:exon
so has part: feature:30308-30468:1:exon
so has part: feature:30539-30567:1:exon
so has part: feature:31164-31255:1:exon
so has part: feature:32440-32496:1:exon
so has part: feature:33320-33466:1:exon
so has part: feature:34343-34436:1:exon

position:34436:1
position: 34436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24778-25787:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:28125-28335:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:29341-29555:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:30308-30468:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:30539-30567:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:31164-31255:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:32440-32496:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:33320-33466:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:34343-34436:1:exon

position:34343:1
position: 34343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TTC5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: TTC5
product: tetratricopeptide repeat domain 5, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041712855.1
SIO_010081: TTC5
subclass of: SO_0000673
so part of: TTC5
location: join(25091..25787,28125..28335,29341..29555,30308..30468,30539..30567,31164..31255,32440..32496,33320..33466,34608..34795,35412..35556,36488..36521,36904..37150)
location: region:25091-37150:1
so has part: feature:25091-25787:1:exon
so has part: feature:28125-28335:1:exon
so has part: feature:29341-29555:1:exon
so has part: feature:30308-30468:1:exon
so has part: feature:30539-30567:1:exon
so has part: feature:31164-31255:1:exon
so has part: feature:32440-32496:1:exon
so has part: feature:33320-33466:1:exon
so has part: feature:34608-34795:1:exon
so has part: feature:35412-35556:1:exon
so has part: feature:36488-36521:1:exon
so has part: feature:36904-37150:1:exon

position:25091:1
position: 25091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25091-25787:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:28125-28335:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:29341-29555:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:30308-30468:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:30539-30567:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:31164-31255:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:32440-32496:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:33320-33466:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:34608-34795:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:35412-35556:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:36488-36521:1:exon

position:36488:1
position: 36488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36521:1
position: 36521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:36904-37150:1:exon

position:36904:1
position: 36904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TTC5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: TTC5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetratricopeptide repeat protein 5 isoform X4
translation: MGKWRLWFYRDMAAAILSRHGGLSRPRPAFPPSPPAAGARGFSGVAEQRRLLLHPAGLRRGLGAPPDFGGAHKKRSRGGSGSVPGRSRCPPGFIPVLFRFYPAFIPVLSRFCPVLTSLLSPQAAPPAGNASEDLRCGLRAFFYDLLSELFRFRDSLPGHDPTCDPTCDPCDPTCDPCDPGHDPADPSGDPCDPSDDPLVAEMERTLRLMEQIHVSPAGRGRALVLRARALGVAPAAGAARAEAALGHALKLDPALGAAWRHLGEQRWRRGDLRGARQAFGGALRQGEDPEARRLLSMALRAQGAGPGPRGAGPGGEGAGPAPGGGALRESLAQAEAAVRCDPKNGQSWYVLANAHVALFFAGGQSPGSARRALAAYAQAERVDPAAAANPDLHLNRATLLQFLERFQGALEGLSRAAELAPGWAEPRNRHRHLMEHLGRVCGLLESRHGGAAGRGRGRGRRHRVQRRPHVGRDRGRRGGRGRARADQSPGAAPGTDVLVRGAPCPLPPVPGGQRPPPPRPRPGPAPPGADQSRRAAARPGHAPRRQLTNPGAPPPAPDTPPDAN
SIO_010081: TTC5
subclass of: SO_0000673
so part of: TTC5
location: join(25359..25787,28125..28335,29341..29555,30308..30468,30539..30567,31164..31255,32440..32496,33320..33466,35412..35556,36870..37078)
location: region:25359-37078:1
so has part: feature:25359-25787:1:exon
so has part: feature:28125-28335:1:exon
so has part: feature:29341-29555:1:exon
so has part: feature:30308-30468:1:exon
so has part: feature:30539-30567:1:exon
so has part: feature:31164-31255:1:exon
so has part: feature:32440-32496:1:exon
so has part: feature:33320-33466:1:exon
so has part: feature:35412-35556:1:exon
so has part: feature:36870-37078:1:exon

XP_041568792.1
type: Protein
SIO_000068: ncbiprotein

position:25359:1
position: 25359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37078:1
position: 37078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25359-25787:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:28125-28335:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:29341-29555:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:30308-30468:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:30539-30567:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:31164-31255:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:32440-32496:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:33320-33466:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:35412-35556:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:36870-37078:1:exon

TTC5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: TTC5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetratricopeptide repeat protein 5 isoform X7
translation: MGKWRLWFYRDMAAAILSRHGGLSRPRPAFPPSPPAAGARGFSGVAEQRRLLLHPAGLRRGLGAPPDFGGAHKKRSRGGSGSVPGRSRCPPGFIPVLFRFYPAFIPVLSRFCPVLTSLLSPQAAPPAGNASEDLRCGLRAFFYDLLSELFRFRDSLPGHDPTCDPTCDPCDPTCDPCDPGHDPADPSGDPCDPSDDPLVAEMERTLRLMEQIHVSPAGRGRALVLRARALGVAPAAGAARAEAALGHALKLDPALGAAWRHLGEQRWRRGDLRGARQAFGGALRQGEDPEARRLLSMALRAQGAGPGPRGAGPGGEGAGPAPGGGALRESLAQAEAAVRCDPRNGQSWYVLANAHVALFFAGGQSPGSARRALAAYAQAERVDPAAAANPDLHLNRATLLQFLERFQGALEGLSRAAELAPGWAEPRNRHRHLMEHLGRVCGLLESRGKLRGKRRRGVAGPVPLPLLGPLGGAGGPRPSPIAALRPGPNPHRVVLGRVLFSTAPPGGVPYTVGLQDGGGAVAAVTVYNAAPTWGVTVGDAVGVAEPELTNHLVQHQGQMFSFVGLRVPSPLSLVVNGRRPPGHALAPPRLALTNPGAPPPAPDTPPDAN
SIO_010081: TTC5
subclass of: SO_0000673
so part of: TTC5
location: join(25359..25787,28125..28335,29341..29555,30308..30497,31164..31255,32440..32496,33320..33466,34608..34795,35412..35556,36870..37025)
location: region:25359-37025:1
so has part: feature:25359-25787:1:exon
so has part: feature:28125-28335:1:exon
so has part: feature:29341-29555:1:exon
so has part: feature:30308-30497:1:exon
so has part: feature:31164-31255:1:exon
so has part: feature:32440-32496:1:exon
so has part: feature:33320-33466:1:exon
so has part: feature:34608-34795:1:exon
so has part: feature:35412-35556:1:exon
so has part: feature:36870-37025:1:exon

XP_041568795.1
type: Protein
SIO_000068: ncbiprotein

position:37025:1
position: 37025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25359-25787:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:28125-28335:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:29341-29555:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:30308-30497:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:31164-31255:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:32440-32496:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:33320-33466:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:34608-34795:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:35412-35556:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:36870-37025:1:exon

TTC5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: TTC5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetratricopeptide repeat protein 5 isoform X1
translation: MGKWRLWFYRDMAAAILSRHGGLSRPRPAFPPSPPAAGARGFSGVAEQRRLLLHPAGLRRGLGAPPDFGGAHKKRSRGGSGSVPGRSRCPPGFIPVLFRFYPAFIPVLSRFCPVLTSLLSPQAAPPAGNASEDLRCGLRAFFYDLLSELFRFRDSLPGHDPTCDPTCDPCDPTCDPCDPGHDPADPSGDPCDPSDDPLVAEMERTLRLMEQIHVSPAGRGRALVLRARALGVAPAAGAARAEAALGHALKLDPALGAAWRHLGEQRWRRGDLRGARQAFGGALRQGEDPEARRLLSMALRAQGAGPGPRGAGPGGEGAGPAPGGGALRESLAQAEAAVRCDPKNGQSWYVLANAHVALFFAGGQSPGSARRALAAYAQAERVDPAAAANPDLHLNRATLLQFLERFQGALEGLSRAAELAPGWAEPRNRHRHLMEHLGRVCGLLESRGKLRGKRRRGVAGPVPLPLLGPLGGAGGPRPSPIAALRPGPNPHRVVLGRVLFSTAPPGGVPYTVGLQDGGGAVAAVTVYNAAPTWGVTVGDAVGVAEPELTNHLVQHQGQTFSFVGLRVPSPLSLVVNGRRPPGHALAPPRLALTNPGAPPPAPDTPPDAN
SIO_010081: TTC5
subclass of: SO_0000673
so part of: TTC5
location: join(25359..25787,28125..28335,29341..29555,30308..30468,30539..30567,31164..31255,32440..32496,33320..33466,34608..34795,35412..35556,36488..36521,36904..37025)
location: region:25359-37025:1
so has part: feature:25359-25787:1:exon
so has part: feature:28125-28335:1:exon
so has part: feature:29341-29555:1:exon
so has part: feature:30308-30468:1:exon
so has part: feature:30539-30567:1:exon
so has part: feature:31164-31255:1:exon
so has part: feature:32440-32496:1:exon
so has part: feature:33320-33466:1:exon
so has part: feature:34608-34795:1:exon
so has part: feature:35412-35556:1:exon
so has part: feature:36488-36521:1:exon
so has part: feature:36904-37025:1:exon

XP_041568789.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25359-25787:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:28125-28335:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:29341-29555:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:30308-30468:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:30539-30567:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:31164-31255:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:32440-32496:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:33320-33466:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:34608-34795:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:35412-35556:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:36488-36521:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:36904-37025:1:exon

TTC5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: TTC5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetratricopeptide repeat protein 5 isoform X2
translation: MGKWRLWFYRDMAAAILSRHGGLSRPRPAFPPSPPAAGARGFSGVAEQRRLLLHPAGLRRGLGAPPDFGGAHKKRSRGGSGSVPGRSRCPPGFIPVLFRFYPAFIPVLSRFCPVLTSLLSPQAAPPAGNASEDLRCGLRAFFYDLLSELFRFRDSLPGHDPTCDPTCDPCDPTCDPCDPGHDPADPSGDPCDPSDDPLVAEMERTLRLMEQIHVSPAGRGRALVLRARALGVAPAAGAARAEAALGHALKLDPALGAAWRHLGEQRWRRGDLRGARQAFGGALRQGEDPEARRLLSMALRAQGAGPGPRGAGPGGEGAGPAPGGGALRESLAQAEAAVRCDPKNGQSWYVLANAHVALFFAGGQSPGSARRALAAYAQAERVDPAAAANPDLHLNRATLLQFLERFQGALEGLSRAAELAPGWAEPRNRHRHLMEHLGRVCGLLESRGKLRGKRRRGVAGPVPLPLLGPLGGAGGPRPSPIAALRPGPNPHRVVLGRVLFSTAPPGGVPYTVGLQDGGGAVAAVTVYNAAPTWGVTVGDAVGVAEPELTNHLVQHQGQMFSFVGLRVPSPLSLVVNGRRPPGHALAPPRLALTNPGAPPPAPDTPPDAN
SIO_010081: TTC5
subclass of: SO_0000673
so part of: TTC5
location: join(25359..25787,28125..28335,29341..29555,30308..30468,30539..30567,31164..31255,32440..32496,33320..33466,34608..34795,35412..35556,36870..37025)
location: region:25359-37025:1
so has part: feature:25359-25787:1:exon
so has part: feature:28125-28335:1:exon
so has part: feature:29341-29555:1:exon
so has part: feature:30308-30468:1:exon
so has part: feature:30539-30567:1:exon
so has part: feature:31164-31255:1:exon
so has part: feature:32440-32496:1:exon
so has part: feature:33320-33466:1:exon
so has part: feature:34608-34795:1:exon
so has part: feature:35412-35556:1:exon
so has part: feature:36870-37025:1:exon

XP_041568790.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25359-25787:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:28125-28335:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:29341-29555:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:30308-30468:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:30539-30567:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:31164-31255:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:32440-32496:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:33320-33466:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:34608-34795:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:35412-35556:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:36870-37025:1:exon

TTC5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: TTC5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetratricopeptide repeat protein 5 isoform X3
translation: MGKWRLWFYRDMAAAILSRHGGLSRPRPAFPPSPPAAGARGFSGVAEQRRLLLHPAGLRRGLGAPPDFGGAHKKRSRGGSGSVPGRSRCPPGFIPVLFRFYPAFIPVLSRFCPVLTSLLSPQAAPPAGNASEDLRCGLRAFFYDLLSELFRFRDSLPGHDPTCDPTCDPCDPTCDPCDPGHDPADPSGDPCDPSDDPLVAEMERTLRLMEQIHVSPAGRGRALVLRARALGVAPAAGAARAEAALGHALKLDPALGAAWRHLGEQRWRRGDLRGARQAFGGALRQGEDPEARRLLSMALRAQGAGPGPRGAGPGGEGAGPAPGGGALRESLAQAEAAVRCDPKNGQSWYVLANAHVALFFAGGQSPGSARRALAAYAQAERVDPAAAANPDLHLNRATLLQFLERFQGALEGLSRAAELAPGWAEPRNRHRHLMEHLGRVCGLLESRGKLRGKRRRGVAGPVPLPLLGPLGGAGGPRPSPIAALRPGPNPHRVVLGRVLFSTAPPGGVPYTVGLQDGGGAVAAVTVYNAAPTWGVTVGDAVGVAEPELTNHLVQHQGQTFSFVGLRVPSPLSLSILVYNCLYWSILVYNGL
SIO_010081: TTC5
subclass of: SO_0000673
so part of: TTC5
location: join(25359..25787,28125..28335,29341..29555,30308..30468,30539..30567,31164..31255,32440..32496,33320..33466,34608..34795,35412..35556,36689..36790)
location: region:25359-36790:1
so has part: feature:25359-25787:1:exon
so has part: feature:28125-28335:1:exon
so has part: feature:29341-29555:1:exon
so has part: feature:30308-30468:1:exon
so has part: feature:30539-30567:1:exon
so has part: feature:31164-31255:1:exon
so has part: feature:32440-32496:1:exon
so has part: feature:33320-33466:1:exon
so has part: feature:34608-34795:1:exon
so has part: feature:35412-35556:1:exon
so has part: feature:36689-36790:1:exon

XP_041568791.1
type: Protein
SIO_000068: ncbiprotein

position:36790:1
position: 36790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25359-25787:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:28125-28335:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:29341-29555:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:30308-30468:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:30539-30567:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:31164-31255:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:32440-32496:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:33320-33466:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:34608-34795:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:35412-35556:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:36689-36790:1:exon

TTC5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: TTC5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetratricopeptide repeat protein 5 isoform X6
translation: MGKWRLWFYRDMAAAILSRHGGLSRPRPAFPPSPPAAGARGFSGVAEQRRLLLHPAGLRRGLGAPPDFGGAHKKRSRGGSGSVPGRSRCPPGFIPVLFRFYPAFIPVLSRFCPVLTSLLSPQAAPPAGNASEDLRCGLRAFFYDLLSELFRFRDSLPGHDPTCDPTCDPCDPTCDPCDPGHDPADPSGDPCDPSDDPLVAEMERTLRLMEQIHVSPAGRGRALVLRARALGVAPAAGAARAEAALGHALKLDPALGAAWRHLGEQRWRRGDLRGARQAFGGALRQGEDPEARRLLSMALRAQGAGPGPRGAGPGGEGAGPAPGGGALRESLAQAEAAVRCDPKNGQSWYVLANAHVALFFAGGQSPGSARRALAAYAQAERVDPAAAANPDLHLNRATLLQFLERFQGALEGLSRAAELAPGWAEPRNRHRHLMEHLGRVCGLLESRGKLRGKRRRGVVGVSP
SIO_010081: TTC5
subclass of: SO_0000673
so part of: TTC5
location: join(25359..25787,28125..28335,29341..29555,30308..30468,30539..30567,31164..31255,32440..32496,33320..33466,34343..34393)
location: region:25359-34393:1
so has part: feature:25359-25787:1:exon
so has part: feature:28125-28335:1:exon
so has part: feature:29341-29555:1:exon
so has part: feature:30308-30468:1:exon
so has part: feature:30539-30567:1:exon
so has part: feature:31164-31255:1:exon
so has part: feature:32440-32496:1:exon
so has part: feature:33320-33466:1:exon
so has part: feature:34343-34393:1:exon

XP_041568794.1
type: Protein
SIO_000068: ncbiprotein

position:34393:1
position: 34393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25359-25787:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:28125-28335:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:29341-29555:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:30308-30468:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:30539-30567:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:31164-31255:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:32440-32496:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:33320-33466:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:34343-34393:1:exon

TTC5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: TTC5
product: tetratricopeptide repeat domain 5, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_041712859.1
SIO_010081: TTC5
subclass of: SO_0000673
so part of: TTC5
location: join(26929..27042,28125..28335,29341..29555,30308..30497,31164..31255,32440..32496,33320..33466,34608..34795,35412..35556,36488..36523,36906..37150)
location: region:26929-37150:1
so has part: feature:26929-27042:1:exon
so has part: feature:28125-28335:1:exon
so has part: feature:29341-29555:1:exon
so has part: feature:30308-30497:1:exon
so has part: feature:31164-31255:1:exon
so has part: feature:32440-32496:1:exon
so has part: feature:33320-33466:1:exon
so has part: feature:34608-34795:1:exon
so has part: feature:35412-35556:1:exon
so has part: feature:36488-36523:1:exon
so has part: feature:36906-37150:1:exon

position:26929:1
position: 26929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26929-27042:1:exon

position:27042:1
position: 27042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:28125-28335:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:29341-29555:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:30308-30497:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:31164-31255:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:32440-32496:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:33320-33466:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:34608-34795:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:35412-35556:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:36488-36523:1:exon

position:36523:1
position: 36523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:36906-37150:1:exon

position:36906:1
position: 36906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TTC5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: TTC5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetratricopeptide repeat protein 5 isoform X5
translation: MAAPAEEEAAAAESGGGGGGGEGGDEAALRRMEDLLSELFRFRDSLPGHDPTCDPTCDPCDPTCDPCDPGHDPADPSGDPCDPSDDPLVAEMERTLRLMEQIHVSPAGRGRALVLRARALGVAPAAGAARAEAALGHALKLDPALGAAWRHLGEQRWRRGDLRGARQAFGGALRQGEDPEARRLLSMALRAQGAGPGPRGAGPGGEGAGPAPGGGALRESLAQAEAAVRCDPRNGQSWYVLANAHVALFFAGGQSPGSARRALAAYAQAERVDPAAAANPDLHLNRATLLQFLERFQGALEGLSRAAELAPGWAEPRNRHRHLMEHLGRVCGLLESRGKLRGKRRRGVAGPVPLPLLGPLGGAGGPRPSPIAALRPGPNPHRVVLGRVLFSTAPPGGVPYTVGLQDGGGAVAAVTVYNAAPTWGVTVGDAVGVAEPELTNHLVQHQGQTFSFVGLRVPSPLSLVVNGRRPPGHALAPPRLALTNPGAPPPAPDTPPDAN
SIO_010081: TTC5
subclass of: SO_0000673
so part of: TTC5
location: join(26944..27042,28125..28335,29341..29555,30308..30497,31164..31255,32440..32496,33320..33466,34608..34795,35412..35556,36488..36523,36906..37025)
location: region:26944-37025:1
so has part: feature:26944-27042:1:exon
so has part: feature:28125-28335:1:exon
so has part: feature:29341-29555:1:exon
so has part: feature:30308-30497:1:exon
so has part: feature:31164-31255:1:exon
so has part: feature:32440-32496:1:exon
so has part: feature:33320-33466:1:exon
so has part: feature:34608-34795:1:exon
so has part: feature:35412-35556:1:exon
so has part: feature:36488-36523:1:exon
so has part: feature:36906-37025:1:exon

XP_041568793.1
type: Protein
SIO_000068: ncbiprotein

position:26944:1
position: 26944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26944-27042:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:28125-28335:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:29341-29555:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:30308-30497:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:31164-31255:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:32440-32496:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:33320-33466:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:34608-34795:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:35412-35556:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:36488-36523:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:36906-37025:1:exon

HNRNPC
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: HNRNPC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(38805..52545)
location: region:38805-52545:-1
so has part: feature:38805-52545:-1:exon
subclass of: SO_0000010

121468775
type: Gene
SIO_000068: ncbigene

position:38805:-1
position: 38805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:52545:-1
position: 52545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38805-52545:-1:exon

HNRNPC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: HNRNPC
product: heterogeneous nuclear ribonucleoprotein C, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 77 samples with support for all annotated introns
transcript id: XM_041712864.1
SIO_010081: HNRNPC
subclass of: SO_0000673
so part of: HNRNPC
location: complement(join(38805..38952,39779..39936,41021..41122,42574..42731,42849..42896,44457..44571,45565..45829,49085..49113,52473..52545))
location: region:38805-52545:-1
so has part: feature:52473-52545:-1:exon
so has part: feature:49085-49113:-1:exon
so has part: feature:45565-45829:-1:exon
so has part: feature:44457-44571:-1:exon
so has part: feature:42849-42896:-1:exon
so has part: feature:42574-42731:-1:exon
so has part: feature:41021-41122:-1:exon
so has part: feature:39779-39936:-1:exon
so has part: feature:38805-38952:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:52473-52545:-1:exon

position:52473:-1
position: 52473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:49085-49113:-1:exon

position:49085:-1
position: 49085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49113:-1
position: 49113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:45565-45829:-1:exon

position:45565:-1
position: 45565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45829:-1
position: 45829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:44457-44571:-1:exon

position:44457:-1
position: 44457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44571:-1
position: 44571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:42849-42896:-1:exon

position:42849:-1
position: 42849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42896:-1
position: 42896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:42574-42731:-1:exon

position:42574:-1
position: 42574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42731:-1
position: 42731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:41021-41122:-1:exon

position:41021:-1
position: 41021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41122:-1
position: 41122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:39779-39936:-1:exon

position:39779:-1
position: 39779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39936:-1
position: 39936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:38805-38952:-1:exon

position:38952:-1
position: 38952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HNRNPC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: HNRNPC
product: heterogeneous nuclear ribonucleoprotein C, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 77 samples with support for all annotated introns
transcript id: XM_041712862.1
SIO_010081: HNRNPC
subclass of: SO_0000673
so part of: HNRNPC
location: complement(join(38805..38952,39779..39936,41021..41122,42574..42731,42822..42896,44457..44571,45565..45829,49085..49113,52473..52545))
location: region:38805-52545:-1
so has part: feature:52473-52545:-1:exon
so has part: feature:49085-49113:-1:exon
so has part: feature:45565-45829:-1:exon
so has part: feature:44457-44571:-1:exon
so has part: feature:42822-42896:-1:exon
so has part: feature:42574-42731:-1:exon
so has part: feature:41021-41122:-1:exon
so has part: feature:39779-39936:-1:exon
so has part: feature:38805-38952:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:52473-52545:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:49085-49113:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:45565-45829:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:44457-44571:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:42822-42896:-1:exon

position:42822:-1
position: 42822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:42574-42731:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:41021-41122:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:39779-39936:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:38805-38952:-1:exon

HNRNPC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: HNRNPC
product: heterogeneous nuclear ribonucleoprotein C, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 78 samples with support for all annotated introns
transcript id: XM_041712866.1
SIO_010081: HNRNPC
subclass of: SO_0000673
so part of: HNRNPC
location: complement(join(38805..38952,39779..39936,41021..41122,42574..42731,42849..42896,44496..44571,45565..45829,49085..49113,52473..52544))
location: region:38805-52544:-1
so has part: feature:52473-52544:-1:exon
so has part: feature:49085-49113:-1:exon
so has part: feature:45565-45829:-1:exon
so has part: feature:44496-44571:-1:exon
so has part: feature:42849-42896:-1:exon
so has part: feature:42574-42731:-1:exon
so has part: feature:41021-41122:-1:exon
so has part: feature:39779-39936:-1:exon
so has part: feature:38805-38952:-1:exon

position:52544:-1
position: 52544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52473-52544:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:49085-49113:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:45565-45829:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:44496-44571:-1:exon

position:44496:-1
position: 44496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:42849-42896:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:42574-42731:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:41021-41122:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:39779-39936:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:38805-38952:-1:exon

HNRNPC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: HNRNPC
product: heterogeneous nuclear ribonucleoprotein C, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 78 samples with support for all annotated introns
transcript id: XM_041712865.1
SIO_010081: HNRNPC
subclass of: SO_0000673
so part of: HNRNPC
location: complement(join(38805..38952,39779..39936,41021..41122,42574..42731,42822..42896,44496..44571,45565..45829,49085..49113,52473..52544))
location: region:38805-52544:-1
so has part: feature:52473-52544:-1:exon
so has part: feature:49085-49113:-1:exon
so has part: feature:45565-45829:-1:exon
so has part: feature:44496-44571:-1:exon
so has part: feature:42822-42896:-1:exon
so has part: feature:42574-42731:-1:exon
so has part: feature:41021-41122:-1:exon
so has part: feature:39779-39936:-1:exon
so has part: feature:38805-38952:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:52473-52544:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:49085-49113:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:45565-45829:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:44496-44571:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:42822-42896:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:42574-42731:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:41021-41122:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:39779-39936:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:38805-38952:-1:exon

HNRNPC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: HNRNPC
product: heterogeneous nuclear ribonucleoprotein C, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 97 samples with support for all annotated introns
transcript id: XM_041712863.1
SIO_010081: HNRNPC
subclass of: SO_0000673
so part of: HNRNPC
location: complement(join(38805..38952,39779..39936,41021..41122,42574..42731,42822..42896,44457..44571,45565..45829,49085..49199))
location: region:38805-49199:-1
so has part: feature:49085-49199:-1:exon
so has part: feature:45565-45829:-1:exon
so has part: feature:44457-44571:-1:exon
so has part: feature:42822-42896:-1:exon
so has part: feature:42574-42731:-1:exon
so has part: feature:41021-41122:-1:exon
so has part: feature:39779-39936:-1:exon
so has part: feature:38805-38952:-1:exon

position:49199:-1
position: 49199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49085-49199:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:45565-45829:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:44457-44571:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:42822-42896:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:42574-42731:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:41021-41122:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:39779-39936:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:38805-38952:-1:exon

HNRNPC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: HNRNPC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heterogeneous nuclear ribonucleoproteins C1/C2 isoform X4
translation: MASNVTNKTDPRSLNSRVFIGNLNTLVVKKSDVEAIFAKYGKIVGCSVHKGFAFVQYVNERNARAAVAGEDGRMIAGQVLDINLAAEPKVNRGKAGVKRSAAEMYGSSFDLDYDFQRDYYDRMYSYPARVPPPPPIARAVVPSKRQRVSGNTSRRGKSFNSKSGQRGSSSKSGKLKGDDLQSIKKELGQIKAKVDALLESLERLEREQKAKSDKAEEEQGGGGGSKKDEAGGAKAEGGHEDSAEEGDLLDDDEAEERGDEQLESLKGDEKEAEEGEDDRDSANGEDEP
SIO_010081: HNRNPC
subclass of: SO_0000673
so part of: HNRNPC
location: complement(join(38869..38952,39779..39936,41021..41122,42574..42731,42849..42896,44496..44571,45565..45805))
location: region:38869-45805:-1
so has part: feature:45565-45805:-1:exon
so has part: feature:44496-44571:-1:exon
so has part: feature:42849-42896:-1:exon
so has part: feature:42574-42731:-1:exon
so has part: feature:41021-41122:-1:exon
so has part: feature:39779-39936:-1:exon
so has part: feature:38869-38952:-1:exon

XP_041568800.1
type: Protein
SIO_000068: ncbiprotein

position:38869:-1
position: 38869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45805:-1
position: 45805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45565-45805:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:44496-44571:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:42849-42896:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:42574-42731:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:41021-41122:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:39779-39936:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:38869-38952:-1:exon

HNRNPC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: HNRNPC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heterogeneous nuclear ribonucleoproteins C1/C2 isoform X3
translation: MASNVTNKTDPRSLNSRVFIGNLNTLVVKKSDVEAIFAKYGKIVGCSVHKGFAFVQYVNERNARAAVAGEDGRMIAGQVLDINLAAEPKVNRGKAGVKRSAAEMYGSSFDLDYDFQRDYYDRYQYKPVQSGMYSYPARVPPPPPIARAVVPSKRQRVSGNTSRRGKSFNSKSGQRGSSSKSGKLKGDDLQSIKKELGQIKAKVDALLESLERLEREQKAKSDKAEEEQGGGGGSKKDEAGGAKAEGGHEDSAEEGDLLDDDEAEERGDEQLESLKGDEKEAEEGEDDRDSANGEDEP
SIO_010081: HNRNPC
subclass of: SO_0000673
so part of: HNRNPC
location: complement(join(38869..38952,39779..39936,41021..41122,42574..42731,42822..42896,44496..44571,45565..45805))
location: region:38869-45805:-1
so has part: feature:45565-45805:-1:exon
so has part: feature:44496-44571:-1:exon
so has part: feature:42822-42896:-1:exon
so has part: feature:42574-42731:-1:exon
so has part: feature:41021-41122:-1:exon
so has part: feature:39779-39936:-1:exon
so has part: feature:38869-38952:-1:exon

XP_041568799.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45565-45805:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:44496-44571:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:42822-42896:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:42574-42731:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:41021-41122:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:39779-39936:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:38869-38952:-1:exon

HNRNPC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: HNRNPC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heterogeneous nuclear ribonucleoproteins C1/C2 isoform X2
translation: MASNVTNKTDPRSLNSRVFIGNLNTLVVKKSDVEAIFAKYGKIVGCSVHKGFAFVQYVNERNARAAVAGEDGRMIAGQVLDINLAAEPKVNRGKAGVKRSAAEMYGSVAAPPSPSPLVRSSFDLDYDFQRDYYDRMYSYPARVPPPPPIARAVVPSKRQRVSGNTSRRGKSFNSKSGQRGSSSKSGKLKGDDLQSIKKELGQIKAKVDALLESLERLEREQKAKSDKAEEEQGGGGGSKKDEAGGAKAEGGHEDSAEEGDLLDDDEAEERGDEQLESLKGDEKEAEEGEDDRDSANGEDEP
SIO_010081: HNRNPC
subclass of: SO_0000673
so part of: HNRNPC
location: complement(join(38869..38952,39779..39936,41021..41122,42574..42731,42849..42896,44457..44571,45565..45805))
location: region:38869-45805:-1
so has part: feature:45565-45805:-1:exon
so has part: feature:44457-44571:-1:exon
so has part: feature:42849-42896:-1:exon
so has part: feature:42574-42731:-1:exon
so has part: feature:41021-41122:-1:exon
so has part: feature:39779-39936:-1:exon
so has part: feature:38869-38952:-1:exon

XP_041568798.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45565-45805:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:44457-44571:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:42849-42896:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:42574-42731:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:41021-41122:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:39779-39936:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:38869-38952:-1:exon

HNRNPC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: HNRNPC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heterogeneous nuclear ribonucleoproteins C1/C2 isoform X1
translation: MASNVTNKTDPRSLNSRVFIGNLNTLVVKKSDVEAIFAKYGKIVGCSVHKGFAFVQYVNERNARAAVAGEDGRMIAGQVLDINLAAEPKVNRGKAGVKRSAAEMYGSVAAPPSPSPLVRSSFDLDYDFQRDYYDRYQYKPVQSGMYSYPARVPPPPPIARAVVPSKRQRVSGNTSRRGKSFNSKSGQRGSSSKSGKLKGDDLQSIKKELGQIKAKVDALLESLERLEREQKAKSDKAEEEQGGGGGSKKDEAGGAKAEGGHEDSAEEGDLLDDDEAEERGDEQLESLKGDEKEAEEGEDDRDSANGEDEP
SIO_010081: HNRNPC
subclass of: SO_0000673
so part of: HNRNPC
location: complement(join(38869..38952,39779..39936,41021..41122,42574..42731,42822..42896,44457..44571,45565..45805))
location: region:38869-45805:-1
so has part: feature:45565-45805:-1:exon
so has part: feature:44457-44571:-1:exon
so has part: feature:42822-42896:-1:exon
so has part: feature:42574-42731:-1:exon
so has part: feature:41021-41122:-1:exon
so has part: feature:39779-39936:-1:exon
so has part: feature:38869-38952:-1:exon

XP_041568796.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45565-45805:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:44457-44571:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:42822-42896:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:42574-42731:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:41021-41122:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:39779-39936:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:38869-38952:-1:exon

HNRNPC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: HNRNPC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heterogeneous nuclear ribonucleoproteins C1/C2 isoform X1
translation: MASNVTNKTDPRSLNSRVFIGNLNTLVVKKSDVEAIFAKYGKIVGCSVHKGFAFVQYVNERNARAAVAGEDGRMIAGQVLDINLAAEPKVNRGKAGVKRSAAEMYGSVAAPPSPSPLVRSSFDLDYDFQRDYYDRYQYKPVQSGMYSYPARVPPPPPIARAVVPSKRQRVSGNTSRRGKSFNSKSGQRGSSSKSGKLKGDDLQSIKKELGQIKAKVDALLESLERLEREQKAKSDKAEEEQGGGGGSKKDEAGGAKAEGGHEDSAEEGDLLDDDEAEERGDEQLESLKGDEKEAEEGEDDRDSANGEDEP
SIO_010081: HNRNPC
subclass of: SO_0000673
so part of: HNRNPC
location: complement(join(38869..38952,39779..39936,41021..41122,42574..42731,42822..42896,44457..44571,45565..45805))
location: region:38869-45805:-1
so has part: feature:45565-45805:-1:exon
so has part: feature:44457-44571:-1:exon
so has part: feature:42822-42896:-1:exon
so has part: feature:42574-42731:-1:exon
so has part: feature:41021-41122:-1:exon
so has part: feature:39779-39936:-1:exon
so has part: feature:38869-38952:-1:exon

XP_041568797.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45565-45805:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:44457-44571:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:42822-42896:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:42574-42731:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:41021-41122:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:39779-39936:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:38869-38952:-1:exon

SUPT16H
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: SUPT16H
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(54006..107161)
location: region:54006-107161:-1
so has part: feature:54006-107161:-1:exon
subclass of: SO_0000010

121468781
type: Gene
SIO_000068: ncbigene

position:54006:-1
position: 54006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:107161:-1
position: 107161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54006-107161:-1:exon

SUPT16H
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: SUPT16H
product: SPT16 homolog, facilitates chromatin remodeling subunit, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041712882.1
SIO_010081: SUPT16H
subclass of: SO_0000673
so part of: SUPT16H
location: complement(join(54006..54695,56116..56193,57623..57749,58762..58891,60613..60782,62469..62544,64358..64470,68852..68977,69874..69992,72165..72210,72385..72465,73819..73954,75260..75387,77527..77680,80086..80201,82341..82436,83128..83193,84291..84403,85517..85590,85684..85774,89793..89965,94054..94205,95407..95553,97778..97930,100792..100962,104542..104634,106970..107155))
location: region:54006-107155:-1
so has part: feature:106970-107155:-1:exon
so has part: feature:104542-104634:-1:exon
so has part: feature:100792-100962:-1:exon
so has part: feature:97778-97930:-1:exon
so has part: feature:95407-95553:-1:exon
so has part: feature:94054-94205:-1:exon
so has part: feature:89793-89965:-1:exon
so has part: feature:85684-85774:-1:exon
so has part: feature:85517-85590:-1:exon
so has part: feature:84291-84403:-1:exon
so has part: feature:83128-83193:-1:exon
so has part: feature:82341-82436:-1:exon
so has part: feature:80086-80201:-1:exon
so has part: feature:77527-77680:-1:exon
so has part: feature:75260-75387:-1:exon
so has part: feature:73819-73954:-1:exon
so has part: feature:72385-72465:-1:exon
so has part: feature:72165-72210:-1:exon
so has part: feature:69874-69992:-1:exon
so has part: feature:68852-68977:-1:exon
so has part: feature:64358-64470:-1:exon
so has part: feature:62469-62544:-1:exon
so has part: feature:60613-60782:-1:exon
so has part: feature:58762-58891:-1:exon
so has part: feature:57623-57749:-1:exon
so has part: feature:56116-56193:-1:exon
so has part: feature:54006-54695:-1:exon

position:107155:-1
position: 107155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:106970-107155:-1:exon

position:106970:-1
position: 106970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:104542-104634:-1:exon

position:104542:-1
position: 104542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:104634:-1
position: 104634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:100792-100962:-1:exon

position:100792:-1
position: 100792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:100962:-1
position: 100962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:97778-97930:-1:exon

position:97778:-1
position: 97778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:97930:-1
position: 97930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:95407-95553:-1:exon

position:95407:-1
position: 95407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:95553:-1
position: 95553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:94054-94205:-1:exon

position:94054:-1
position: 94054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:94205:-1
position: 94205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:89793-89965:-1:exon

position:89793:-1
position: 89793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:89965:-1
position: 89965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:85684-85774:-1:exon

position:85684:-1
position: 85684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:85774:-1
position: 85774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:85517-85590:-1:exon

position:85517:-1
position: 85517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:85590:-1
position: 85590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:84291-84403:-1:exon

position:84291:-1
position: 84291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:84403:-1
position: 84403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:83128-83193:-1:exon

position:83128:-1
position: 83128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:83193:-1
position: 83193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:82341-82436:-1:exon

position:82341:-1
position: 82341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:82436:-1
position: 82436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:80086-80201:-1:exon

position:80086:-1
position: 80086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:80201:-1
position: 80201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:77527-77680:-1:exon

position:77527:-1
position: 77527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:77680:-1
position: 77680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:75260-75387:-1:exon

position:75260:-1
position: 75260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:75387:-1
position: 75387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:73819-73954:-1:exon

position:73819:-1
position: 73819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:73954:-1
position: 73954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:72385-72465:-1:exon

position:72385:-1
position: 72385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:72465:-1
position: 72465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:72165-72210:-1:exon

position:72165:-1
position: 72165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:72210:-1
position: 72210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:69874-69992:-1:exon

position:69874:-1
position: 69874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:69992:-1
position: 69992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:68852-68977:-1:exon

position:68852:-1
position: 68852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68977:-1
position: 68977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:64358-64470:-1:exon

position:64358:-1
position: 64358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64470:-1
position: 64470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:62469-62544:-1:exon

position:62469:-1
position: 62469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:62544:-1
position: 62544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:60613-60782:-1:exon

position:60613:-1
position: 60613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:60782:-1
position: 60782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:58762-58891:-1:exon

position:58762:-1
position: 58762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:58891:-1
position: 58891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:57623-57749:-1:exon

position:57623:-1
position: 57623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57749:-1
position: 57749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:56116-56193:-1:exon

position:56116:-1
position: 56116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:56193:-1
position: 56193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:54006-54695:-1:exon

position:54695:-1
position: 54695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SUPT16H
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: SUPT16H
product: SPT16 homolog, facilitates chromatin remodeling subunit, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 long SRA read, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_041712881.1
SIO_010081: SUPT16H
subclass of: SO_0000673
so part of: SUPT16H
location: complement(join(54006..54695,56116..56193,57623..57749,58762..58891,60613..60782,62469..62544,64358..64470,68852..68977,69874..69992,72339..72465,73819..73954,75260..75387,77527..77680,80086..80201,82341..82436,83128..83193,84291..84403,85517..85590,85684..85774,89793..89965,94054..94205,95407..95553,97778..97930,100792..100962,104542..104634,106970..107154))
location: region:54006-107154:-1
so has part: feature:106970-107154:-1:exon
so has part: feature:104542-104634:-1:exon
so has part: feature:100792-100962:-1:exon
so has part: feature:97778-97930:-1:exon
so has part: feature:95407-95553:-1:exon
so has part: feature:94054-94205:-1:exon
so has part: feature:89793-89965:-1:exon
so has part: feature:85684-85774:-1:exon
so has part: feature:85517-85590:-1:exon
so has part: feature:84291-84403:-1:exon
so has part: feature:83128-83193:-1:exon
so has part: feature:82341-82436:-1:exon
so has part: feature:80086-80201:-1:exon
so has part: feature:77527-77680:-1:exon
so has part: feature:75260-75387:-1:exon
so has part: feature:73819-73954:-1:exon
so has part: feature:72339-72465:-1:exon
so has part: feature:69874-69992:-1:exon
so has part: feature:68852-68977:-1:exon
so has part: feature:64358-64470:-1:exon
so has part: feature:62469-62544:-1:exon
so has part: feature:60613-60782:-1:exon
so has part: feature:58762-58891:-1:exon
so has part: feature:57623-57749:-1:exon
so has part: feature:56116-56193:-1:exon
so has part: feature:54006-54695:-1:exon

position:107154:-1
position: 107154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:106970-107154:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:104542-104634:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:100792-100962:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:97778-97930:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:95407-95553:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:94054-94205:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:89793-89965:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:85684-85774:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:85517-85590:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:84291-84403:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:83128-83193:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:82341-82436:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:80086-80201:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:77527-77680:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:75260-75387:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:73819-73954:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:72339-72465:-1:exon

position:72339:-1
position: 72339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:69874-69992:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:68852-68977:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:64358-64470:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:62469-62544:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:60613-60782:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:58762-58891:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:57623-57749:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:56116-56193:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:54006-54695:-1:exon

SUPT16H
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: SUPT16H
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FACT complex subunit SPT16 isoform X2
translation: MALSLDREAFARRLRRLYASWQKGEDEFGGVDAIVVAVGVDEEIVYAKSTALQTWLFGYELTDTVMLFCEERVLFLASRKKVEFLKQVAPPKGAEGTNGLPAVTLLVREKNESNKANFEKLLEALRGSRGGRRLGVFAKDKFPGEFLRSWNDALAKEGFEKVDVSAAVAQAMAAKEEVELQLMRKAAAITSEVFTKFFKERVMEIVDADEKVRHSKLAEAVEKAIEEKKFLAGADPSAVEMCYPPIIQSGGNYNLKFSVVSDKSHMHFGAITCSMGIRYKSYCSNLVRTLMVDPSQEMQEHYGFLLGLQEVLLRELRHGARLCDVYAAVMDVVKKQRPELLGKITKNLGFAMGIEFREGSLVINSKNQQRLKKGMVFSVNVGLSELPNRGAARPEDRTYALFLGDTVLVDEDGPAVLLTAVKKKVKNVGIFLKNEDEDEEEPDKDEAEDLLGRSSRAALLTERTRNELTAEEKRRAHQKELATQLNEDARRRLTEQRGEQQTQKARKSNVSYKSAALLPKEPHVREMKIYIDKKYESVIMPVFGIATPFHIATIKNISMSVEGDYTYLRINFFCPGSALGRNEGNIFPNPEATFVKEITYRASNLKPPGESTVPASNLQNAFRIIKEVQKRYKTREAEEKEKEGIVKQDSLVINLNRSNPKLKDLYIRPNIAQKRMQGALEAHVNGFRFTSVRGDKVDILYNNIKHAVFQPCDGEMIIVLHFHLKNAIMFGKKRHTDVQFYTEVGEITTDLGKHQHMHDRDDLYAEQMEREMRHKLKTAFKNFIEKVEALTKEELEFEVPFRELGFNGAPYRSTCLLQPTSSALVNCTEWPPFVVTLDEVELIHFERVQFHLKNFDLVIVYKDYARKVTMINAIPVASLDPIKEWLNSCDLKYTEGVQSLNWTKIMKTIVDDPEGFFEQGGWSFLEPEGEGSEAEPGESESELEDETFNPSEEDEEEEEDSDEDYSSEAEESEYSKDSLGSEEESGKDWDELEEEARKADRESQYEEEEERGRGRKRKGPPGRGRPHPPKKKRK
SIO_010081: SUPT16H
subclass of: SO_0000673
so part of: SUPT16H
location: complement(join(54586..54695,56116..56193,57623..57749,58762..58891,60613..60782,62469..62544,64358..64470,68852..68977,69874..69992,72165..72210,72385..72465,73819..73954,75260..75387,77527..77680,80086..80201,82341..82436,83128..83193,84291..84403,85517..85590,85684..85774,89793..89965,94054..94205,95407..95553,97778..97930,100792..100962,104542..104634,106970..107035))
location: region:54586-107035:-1
so has part: feature:106970-107035:-1:exon
so has part: feature:104542-104634:-1:exon
so has part: feature:100792-100962:-1:exon
so has part: feature:97778-97930:-1:exon
so has part: feature:95407-95553:-1:exon
so has part: feature:94054-94205:-1:exon
so has part: feature:89793-89965:-1:exon
so has part: feature:85684-85774:-1:exon
so has part: feature:85517-85590:-1:exon
so has part: feature:84291-84403:-1:exon
so has part: feature:83128-83193:-1:exon
so has part: feature:82341-82436:-1:exon
so has part: feature:80086-80201:-1:exon
so has part: feature:77527-77680:-1:exon
so has part: feature:75260-75387:-1:exon
so has part: feature:73819-73954:-1:exon
so has part: feature:72385-72465:-1:exon
so has part: feature:72165-72210:-1:exon
so has part: feature:69874-69992:-1:exon
so has part: feature:68852-68977:-1:exon
so has part: feature:64358-64470:-1:exon
so has part: feature:62469-62544:-1:exon
so has part: feature:60613-60782:-1:exon
so has part: feature:58762-58891:-1:exon
so has part: feature:57623-57749:-1:exon
so has part: feature:56116-56193:-1:exon
so has part: feature:54586-54695:-1:exon

XP_041568816.1
type: Protein
SIO_000068: ncbiprotein

position:54586:-1
position: 54586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:107035:-1
position: 107035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:106970-107035:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:104542-104634:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:100792-100962:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:97778-97930:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:95407-95553:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:94054-94205:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:89793-89965:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:85684-85774:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:85517-85590:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:84291-84403:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:83128-83193:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:82341-82436:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:80086-80201:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:77527-77680:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:75260-75387:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:73819-73954:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:72385-72465:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:72165-72210:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:69874-69992:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:68852-68977:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:64358-64470:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:62469-62544:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:60613-60782:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:58762-58891:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:57623-57749:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:56116-56193:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:54586-54695:-1:exon

SUPT16H
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: SUPT16H
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FACT complex subunit SPT16 isoform X1
translation: MALSLDREAFARRLRRLYASWQKGEDEFGGVDAIVVAVGVDEEIVYAKSTALQTWLFGYELTDTVMLFCEERVLFLASRKKVEFLKQVAPPKGAEGTNGLPAVTLLVREKNESNKANFEKLLEALRGSRGGRRLGVFAKDKFPGEFLRSWNDALAKEGFEKVDVSAAVAQAMAAKEEVELQLMRKAAAITSEVFTKFFKERVMEIVDADEKVRHSKLAEAVEKAIEEKKFLAGADPSAVEMCYPPIIQSGGNYNLKFSVVSDKSHMHFGAITCSMGIRYKSYCSNLVRTLMVDPSQEMQEHYGFLLGLQEVLLRELRHGARLCDVYAAVMDVVKKQRPELLGKITKNLGFAMGIEFREGSLVINSKNQQRLKKGMVFSVNVGLSELPNRGAARPEDRTYALFLGDTVLVDEDGPAVLLTAVKKKVKNVGIFLKNEDEDEEEPDKDEAEDLLGRSSRAALLTERTRNELTAEEKRRAHQKELATQLNEDARRRLTEQRGEQQTQKARKSNVSYKSAALLPKEPHVREMKIYIDKKYESVIMPVFGIATPFHIATIKNISMSVEGDYTYLRINFFCPGSALGRNEGNIFPNPEATFVKEITYRASNLKPPGESTVPASNLQNAFRIIKEVQKRYKTREAEEKEKEGIVKQDSLVINLNRSNPKLKDLYIRPNIAQKRMQGALEAHVNGFRFTSVRGDKVDILYNNIKHAVFQPCDGEMIIVLHFHLKNAIMFGKKRHTDVQFYTEVGEITTDLGKHQHMHDRDDLYAEQMEREMRHKLKTAFKNFIEKVEALTKEELEFEVPFRELGFNGAPYRSTCLLQPTSSALVNCTEWPPFVVTLDEVELIHFERVQFHLKNFDLVIVYKDYARKVTMINAIPVASLDPIKEWLNSCDLKYTEGVQSLNWTKIMKTIVDDPEGFFEQGGWSFLEPEGEGSEAEPGESESELEDETFNPSEEDEEEEEDSDEDYSSEAEESEYSKDSLGSEEESGKDWDELEEEARKADRESQYEEEEERGRGRKRKGPPGRGRPHPPKKKRK
SIO_010081: SUPT16H
subclass of: SO_0000673
so part of: SUPT16H
location: complement(join(54586..54695,56116..56193,57623..57749,58762..58891,60613..60782,62469..62544,64358..64470,68852..68977,69874..69992,72339..72465,73819..73954,75260..75387,77527..77680,80086..80201,82341..82436,83128..83193,84291..84403,85517..85590,85684..85774,89793..89965,94054..94205,95407..95553,97778..97930,100792..100962,104542..104634,106970..107035))
location: region:54586-107035:-1
so has part: feature:106970-107035:-1:exon
so has part: feature:104542-104634:-1:exon
so has part: feature:100792-100962:-1:exon
so has part: feature:97778-97930:-1:exon
so has part: feature:95407-95553:-1:exon
so has part: feature:94054-94205:-1:exon
so has part: feature:89793-89965:-1:exon
so has part: feature:85684-85774:-1:exon
so has part: feature:85517-85590:-1:exon
so has part: feature:84291-84403:-1:exon
so has part: feature:83128-83193:-1:exon
so has part: feature:82341-82436:-1:exon
so has part: feature:80086-80201:-1:exon
so has part: feature:77527-77680:-1:exon
so has part: feature:75260-75387:-1:exon
so has part: feature:73819-73954:-1:exon
so has part: feature:72339-72465:-1:exon
so has part: feature:69874-69992:-1:exon
so has part: feature:68852-68977:-1:exon
so has part: feature:64358-64470:-1:exon
so has part: feature:62469-62544:-1:exon
so has part: feature:60613-60782:-1:exon
so has part: feature:58762-58891:-1:exon
so has part: feature:57623-57749:-1:exon
so has part: feature:56116-56193:-1:exon
so has part: feature:54586-54695:-1:exon

XP_041568815.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:106970-107035:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:104542-104634:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:100792-100962:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:97778-97930:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:95407-95553:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:94054-94205:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:89793-89965:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:85684-85774:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:85517-85590:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:84291-84403:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:83128-83193:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:82341-82436:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:80086-80201:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:77527-77680:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:75260-75387:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:73819-73954:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:72339-72465:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:69874-69992:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:68852-68977:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:64358-64470:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:62469-62544:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:60613-60782:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:58762-58891:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:57623-57749:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:56116-56193:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:54586-54695:-1:exon

SUPT16H
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: SUPT16H
product: SPT16 homolog, facilitates chromatin remodeling subunit, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_041712883.1
SIO_010081: SUPT16H
subclass of: SO_0000673
so part of: SUPT16H
location: complement(join(59424..59613,60613..60782,62469..62544,64358..64470,68852..68977,69874..69992,72339..72465,73819..73954,75260..75387,77527..77680,80086..80201,82341..82436,83128..83193,84291..84403,85517..85590,85684..85774,89793..89965,94054..94205,95407..95553,97778..97930,100792..100962,104542..104634,106970..107158))
location: region:59424-107158:-1
so has part: feature:106970-107158:-1:exon
so has part: feature:104542-104634:-1:exon
so has part: feature:100792-100962:-1:exon
so has part: feature:97778-97930:-1:exon
so has part: feature:95407-95553:-1:exon
so has part: feature:94054-94205:-1:exon
so has part: feature:89793-89965:-1:exon
so has part: feature:85684-85774:-1:exon
so has part: feature:85517-85590:-1:exon
so has part: feature:84291-84403:-1:exon
so has part: feature:83128-83193:-1:exon
so has part: feature:82341-82436:-1:exon
so has part: feature:80086-80201:-1:exon
so has part: feature:77527-77680:-1:exon
so has part: feature:75260-75387:-1:exon
so has part: feature:73819-73954:-1:exon
so has part: feature:72339-72465:-1:exon
so has part: feature:69874-69992:-1:exon
so has part: feature:68852-68977:-1:exon
so has part: feature:64358-64470:-1:exon
so has part: feature:62469-62544:-1:exon
so has part: feature:60613-60782:-1:exon
so has part: feature:59424-59613:-1:exon

position:59424:-1
position: 59424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:107158:-1
position: 107158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:106970-107158:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:104542-104634:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:100792-100962:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:97778-97930:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:95407-95553:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:94054-94205:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:89793-89965:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:85684-85774:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:85517-85590:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:84291-84403:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:83128-83193:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:82341-82436:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:80086-80201:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:77527-77680:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:75260-75387:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:73819-73954:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:72339-72465:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:69874-69992:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:68852-68977:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:64358-64470:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:62469-62544:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:60613-60782:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:59424-59613:-1:exon

position:59613:-1
position: 59613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SUPT16H
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: SUPT16H
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FACT complex subunit SPT16 isoform X3
translation: MALSLDREAFARRLRRLYASWQKGEDEFGGVDAIVVAVGVDEEIVYAKSTALQTWLFGYELTDTVMLFCEERVLFLASRKKVEFLKQVAPPKGAEGTNGLPAVTLLVREKNESNKANFEKLLEALRGSRGGRRLGVFAKDKFPGEFLRSWNDALAKEGFEKVDVSAAVAQAMAAKEEVELQLMRKAAAITSEVFTKFFKERVMEIVDADEKVRHSKLAEAVEKAIEEKKFLAGADPSAVEMCYPPIIQSGGNYNLKFSVVSDKSHMHFGAITCSMGIRYKSYCSNLVRTLMVDPSQEMQEHYGFLLGLQEVLLRELRHGARLCDVYAAVMDVVKKQRPELLGKITKNLGFAMGIEFREGSLVINSKNQQRLKKGMVFSVNVGLSELPNRGAARPEDRTYALFLGDTVLVDEDGPAVLLTAVKKKVKNVGIFLKNEDEDEEEPDKDEAEDLLGRSSRAALLTERTRNELTAEEKRRAHQKELATQLNEDARRRLTEQRGEQQTQKARKSNVSYKSAALLPKEPHVREMKIYIDKKYESVIMPVFGIATPFHIATIKNISMSVEGDYTYLRINFFCPGSALGRNEGNIFPNPEATFVKEITYRASNLKPPGESTVPASNLQNAFRIIKEVQKRYKTREAEEKEKEGIVKQDSLVINLNRSNPKLKDLYIRPNIAQKRMQGALEAHVNGFRFTSVRGDKVDILYNNIKHAVFQPCDGEMIIVLHFHLKNAIMFGKKRHTDVQFYTEVGEITTDLGKHQHMHDRDDLYAEQMEREMRHKLKTAFKNFIEKVEALTKEELEFEVPFRELGFNGAPYRSTCLLQPTSSALVNCTEWPPFVVTLDEVELIHFERVQFHLKNFDLVIVYKDYARKVTMINAIPVASLDPIKEWLNSCDLKYTEGVQSLFYLCYLSQVYPRCMLPVSGVRYLSQVCLTCLRCVSPVAPAAPVT
SIO_010081: SUPT16H
subclass of: SO_0000673
so part of: SUPT16H
location: complement(join(59439..59613,60613..60782,62469..62544,64358..64470,68852..68977,69874..69992,72339..72465,73819..73954,75260..75387,77527..77680,80086..80201,82341..82436,83128..83193,84291..84403,85517..85590,85684..85774,89793..89965,94054..94205,95407..95553,97778..97930,100792..100962,104542..104634,106970..107035))
location: region:59439-107035:-1
so has part: feature:106970-107035:-1:exon
so has part: feature:104542-104634:-1:exon
so has part: feature:100792-100962:-1:exon
so has part: feature:97778-97930:-1:exon
so has part: feature:95407-95553:-1:exon
so has part: feature:94054-94205:-1:exon
so has part: feature:89793-89965:-1:exon
so has part: feature:85684-85774:-1:exon
so has part: feature:85517-85590:-1:exon
so has part: feature:84291-84403:-1:exon
so has part: feature:83128-83193:-1:exon
so has part: feature:82341-82436:-1:exon
so has part: feature:80086-80201:-1:exon
so has part: feature:77527-77680:-1:exon
so has part: feature:75260-75387:-1:exon
so has part: feature:73819-73954:-1:exon
so has part: feature:72339-72465:-1:exon
so has part: feature:69874-69992:-1:exon
so has part: feature:68852-68977:-1:exon
so has part: feature:64358-64470:-1:exon
so has part: feature:62469-62544:-1:exon
so has part: feature:60613-60782:-1:exon
so has part: feature:59439-59613:-1:exon

XP_041568817.1
type: Protein
SIO_000068: ncbiprotein

position:59439:-1
position: 59439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:106970-107035:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:104542-104634:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:100792-100962:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:97778-97930:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:95407-95553:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:94054-94205:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:89793-89965:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:85684-85774:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:85517-85590:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:84291-84403:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:83128-83193:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:82341-82436:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:80086-80201:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:77527-77680:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:75260-75387:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:73819-73954:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:72339-72465:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:69874-69992:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:68852-68977:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:64358-64470:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:62469-62544:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:60613-60782:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:59439-59613:-1:exon

SUPT16H
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: SUPT16H
product: SPT16 homolog, facilitates chromatin remodeling subunit, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_041712884.1
SIO_010081: SUPT16H
subclass of: SO_0000673
so part of: SUPT16H
location: complement(join(65474..65791,68852..68977,69874..69992,72339..72465,73819..73954,75260..75387,77527..77680,80086..80201,82341..82436,83128..83193,84291..84403,85517..85590,85684..85774,89793..89965,94054..94205,95407..95553,97778..97930,100792..100962,104542..104634,106970..107161))
location: region:65474-107161:-1
so has part: feature:106970-107161:-1:exon
so has part: feature:104542-104634:-1:exon
so has part: feature:100792-100962:-1:exon
so has part: feature:97778-97930:-1:exon
so has part: feature:95407-95553:-1:exon
so has part: feature:94054-94205:-1:exon
so has part: feature:89793-89965:-1:exon
so has part: feature:85684-85774:-1:exon
so has part: feature:85517-85590:-1:exon
so has part: feature:84291-84403:-1:exon
so has part: feature:83128-83193:-1:exon
so has part: feature:82341-82436:-1:exon
so has part: feature:80086-80201:-1:exon
so has part: feature:77527-77680:-1:exon
so has part: feature:75260-75387:-1:exon
so has part: feature:73819-73954:-1:exon
so has part: feature:72339-72465:-1:exon
so has part: feature:69874-69992:-1:exon
so has part: feature:68852-68977:-1:exon
so has part: feature:65474-65791:-1:exon

position:65474:-1
position: 65474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:106970-107161:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:104542-104634:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:100792-100962:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:97778-97930:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:95407-95553:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:94054-94205:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:89793-89965:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:85684-85774:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:85517-85590:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:84291-84403:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:83128-83193:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:82341-82436:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:80086-80201:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:77527-77680:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:75260-75387:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:73819-73954:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:72339-72465:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:69874-69992:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:68852-68977:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:65474-65791:-1:exon

position:65791:-1
position: 65791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SUPT16H
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: SUPT16H
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FACT complex subunit SPT16 isoform X4
translation: MALSLDREAFARRLRRLYASWQKGEDEFGGVDAIVVAVGVDEEIVYAKSTALQTWLFGYELTDTVMLFCEERVLFLASRKKVEFLKQVAPPKGAEGTNGLPAVTLLVREKNESNKANFEKLLEALRGSRGGRRLGVFAKDKFPGEFLRSWNDALAKEGFEKVDVSAAVAQAMAAKEEVELQLMRKAAAITSEVFTKFFKERVMEIVDADEKVRHSKLAEAVEKAIEEKKFLAGADPSAVEMCYPPIIQSGGNYNLKFSVVSDKSHMHFGAITCSMGIRYKSYCSNLVRTLMVDPSQEMQEHYGFLLGLQEVLLRELRHGARLCDVYAAVMDVVKKQRPELLGKITKNLGFAMGIEFREGSLVINSKNQQRLKKGMVFSVNVGLSELPNRGAARPEDRTYALFLGDTVLVDEDGPAVLLTAVKKKVKNVGIFLKNEDEDEEEPDKDEAEDLLGRSSRAALLTERTRNELTAEEKRRAHQKELATQLNEDARRRLTEQRGEQQTQKARKSNVSYKSAALLPKEPHVREMKIYIDKKYESVIMPVFGIATPFHIATIKNISMSVEGDYTYLRINFFCPGSALGRNEGNIFPNPEATFVKEITYRASNLKPPGESTVPASNLQNAFRIIKEVQKRYKTREAEEKEKEGIVKQDSLVINLNRSNPKLKDLYIRPNIAQKRMQGALEAHVNGFRFTSVRGDKVDILYNNIKHAVFQPCDGEMIIVLHFHLKNAIMFGKKRHTDVQFYTEVGEITTDLGKHQHMHDRDDLYAEQMEREMFLCRSCGFWGHFLGVFGAISGDFGSGMQQGMFLGFPTDFWGEFGGFWVPDGAGDVSVSFLWVLGPFPQGFWGYFRGFWAAGGAGKFFGDSLGFLG
SIO_010081: SUPT16H
subclass of: SO_0000673
so part of: SUPT16H
location: complement(join(65489..65791,68852..68977,69874..69992,72339..72465,73819..73954,75260..75387,77527..77680,80086..80201,82341..82436,83128..83193,84291..84403,85517..85590,85684..85774,89793..89965,94054..94205,95407..95553,97778..97930,100792..100962,104542..104634,106970..107035))
location: region:65489-107035:-1
so has part: feature:106970-107035:-1:exon
so has part: feature:104542-104634:-1:exon
so has part: feature:100792-100962:-1:exon
so has part: feature:97778-97930:-1:exon
so has part: feature:95407-95553:-1:exon
so has part: feature:94054-94205:-1:exon
so has part: feature:89793-89965:-1:exon
so has part: feature:85684-85774:-1:exon
so has part: feature:85517-85590:-1:exon
so has part: feature:84291-84403:-1:exon
so has part: feature:83128-83193:-1:exon
so has part: feature:82341-82436:-1:exon
so has part: feature:80086-80201:-1:exon
so has part: feature:77527-77680:-1:exon
so has part: feature:75260-75387:-1:exon
so has part: feature:73819-73954:-1:exon
so has part: feature:72339-72465:-1:exon
so has part: feature:69874-69992:-1:exon
so has part: feature:68852-68977:-1:exon
so has part: feature:65489-65791:-1:exon

XP_041568818.1
type: Protein
SIO_000068: ncbiprotein

position:65489:-1
position: 65489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:106970-107035:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:104542-104634:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:100792-100962:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:97778-97930:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:95407-95553:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:94054-94205:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:89793-89965:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:85684-85774:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:85517-85590:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:84291-84403:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:83128-83193:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:82341-82436:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:80086-80201:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:77527-77680:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:75260-75387:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:73819-73954:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:72339-72465:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:69874-69992:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:68852-68977:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:65489-65791:-1:exon

LOC115493013
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC115493013
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(108818..177591)
location: region:108818-177591:-1
so has part: feature:108818-177591:-1:exon
subclass of: SO_0000010

115493013
type: Gene
SIO_000068: ncbigene

position:108818:-1
position: 108818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:177591:-1
position: 177591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:108818-177591:-1:exon

LOC115493013
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC115493013
product: chromodomain-helicase-DNA-binding protein 8
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041712850.1
SIO_010081: LOC115493013
subclass of: SO_0000673
so part of: LOC115493013
location: complement(join(108818..109189,110269..110307,110413..110499,111931..112032,114816..114986,115736..115951,118916..119242,120040..120263,122059..122267,123479..124295,125322..125376,125512..125575,126932..127037,127930..128033,130256..130345,131119..131221,131987..132177,134077..134360,136236..136346,137681..137860,138924..139091,140385..140580,141499..141712,143313..143568,145709..145852,149852..150028,152852..153095,154864..154985,156670..156807,159569..159652,160717..160834,161736..161791,161886..161954,165389..165574,166939..167053,171024..171421,173407..173766,176936..177591))
location: region:108818-177591:-1
so has part: feature:176936-177591:-1:exon
so has part: feature:173407-173766:-1:exon
so has part: feature:171024-171421:-1:exon
so has part: feature:166939-167053:-1:exon
so has part: feature:165389-165574:-1:exon
so has part: feature:161886-161954:-1:exon
so has part: feature:161736-161791:-1:exon
so has part: feature:160717-160834:-1:exon
so has part: feature:159569-159652:-1:exon
so has part: feature:156670-156807:-1:exon
so has part: feature:154864-154985:-1:exon
so has part: feature:152852-153095:-1:exon
so has part: feature:149852-150028:-1:exon
so has part: feature:145709-145852:-1:exon
so has part: feature:143313-143568:-1:exon
so has part: feature:141499-141712:-1:exon
so has part: feature:140385-140580:-1:exon
so has part: feature:138924-139091:-1:exon
so has part: feature:137681-137860:-1:exon
so has part: feature:136236-136346:-1:exon
so has part: feature:134077-134360:-1:exon
so has part: feature:131987-132177:-1:exon
so has part: feature:131119-131221:-1:exon
so has part: feature:130256-130345:-1:exon
so has part: feature:127930-128033:-1:exon
so has part: feature:126932-127037:-1:exon
so has part: feature:125512-125575:-1:exon
so has part: feature:125322-125376:-1:exon
so has part: feature:123479-124295:-1:exon
so has part: feature:122059-122267:-1:exon
so has part: feature:120040-120263:-1:exon
so has part: feature:118916-119242:-1:exon
so has part: feature:115736-115951:-1:exon
so has part: feature:114816-114986:-1:exon
so has part: feature:111931-112032:-1:exon
so has part: feature:110413-110499:-1:exon
so has part: feature:110269-110307:-1:exon
so has part: feature:108818-109189:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:176936-177591:-1:exon

position:176936:-1
position: 176936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:173407-173766:-1:exon

position:173407:-1
position: 173407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:173766:-1
position: 173766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:171024-171421:-1:exon

position:171024:-1
position: 171024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:171421:-1
position: 171421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:166939-167053:-1:exon

position:166939:-1
position: 166939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:167053:-1
position: 167053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:165389-165574:-1:exon

position:165389:-1
position: 165389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:165574:-1
position: 165574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:161886-161954:-1:exon

position:161886:-1
position: 161886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:161954:-1
position: 161954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:161736-161791:-1:exon

position:161736:-1
position: 161736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:161791:-1
position: 161791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:160717-160834:-1:exon

position:160717:-1
position: 160717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:160834:-1
position: 160834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:159569-159652:-1:exon

position:159569:-1
position: 159569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:159652:-1
position: 159652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:156670-156807:-1:exon

position:156670:-1
position: 156670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:156807:-1
position: 156807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:154864-154985:-1:exon

position:154864:-1
position: 154864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:154985:-1
position: 154985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:152852-153095:-1:exon

position:152852:-1
position: 152852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:153095:-1
position: 153095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:149852-150028:-1:exon

position:149852:-1
position: 149852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:150028:-1
position: 150028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:145709-145852:-1:exon

position:145709:-1
position: 145709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:145852:-1
position: 145852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:143313-143568:-1:exon

position:143313:-1
position: 143313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:143568:-1
position: 143568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:141499-141712:-1:exon

position:141499:-1
position: 141499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:141712:-1
position: 141712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:140385-140580:-1:exon

position:140385:-1
position: 140385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:140580:-1
position: 140580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:138924-139091:-1:exon

position:138924:-1
position: 138924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:139091:-1
position: 139091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:137681-137860:-1:exon

position:137681:-1
position: 137681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:137860:-1
position: 137860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:136236-136346:-1:exon

position:136236:-1
position: 136236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:136346:-1
position: 136346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:134077-134360:-1:exon

position:134077:-1
position: 134077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:134360:-1
position: 134360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:131987-132177:-1:exon

position:131987:-1
position: 131987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:132177:-1
position: 132177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:131119-131221:-1:exon

position:131119:-1
position: 131119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:131221:-1
position: 131221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:130256-130345:-1:exon

position:130256:-1
position: 130256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:130345:-1
position: 130345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:127930-128033:-1:exon

position:127930:-1
position: 127930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:128033:-1
position: 128033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:126932-127037:-1:exon

position:126932:-1
position: 126932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:127037:-1
position: 127037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:125512-125575:-1:exon

position:125512:-1
position: 125512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:125575:-1
position: 125575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:125322-125376:-1:exon

position:125322:-1
position: 125322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:125376:-1
position: 125376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:123479-124295:-1:exon

position:123479:-1
position: 123479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:124295:-1
position: 124295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:122059-122267:-1:exon

position:122059:-1
position: 122059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:122267:-1
position: 122267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:120040-120263:-1:exon

position:120040:-1
position: 120040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:120263:-1
position: 120263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:118916-119242:-1:exon

position:118916:-1
position: 118916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:119242:-1
position: 119242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:115736-115951:-1:exon

position:115736:-1
position: 115736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:115951:-1
position: 115951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:114816-114986:-1:exon

position:114816:-1
position: 114816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:114986:-1
position: 114986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:111931-112032:-1:exon

position:111931:-1
position: 111931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:112032:-1
position: 112032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:110413-110499:-1:exon

position:110413:-1
position: 110413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:110499:-1
position: 110499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:110269-110307:-1:exon

position:110269:-1
position: 110269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:110307:-1
position: 110307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:108818-109189:-1:exon

position:109189:-1
position: 109189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115493013
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC115493013
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 8
translation: MADPIMDLFDDPNLFGLDPLPDDLVTPAAAPPPSDPLAEALGLSGALDPSPTPPPPPQPAPPPPPPSSAPPPPPPPPLPHPDPEVLSQGNPFMGVSAPPPPPPPPPPPSPPPKIVILKAPPPSGPAPATPNGGKLSLAKVLGGVASGAVGVASGGAGGVASGGGARQVKQVLLQPLKAGPGGPAAAHLKPGLGLGAGQGDSKRITLVLQPPPGQGTAPGQRHVVLGTLPGKLLLQSNAAAPATPATPAKGASGAPAKVVTIQLQVQPAAAAGAAGQAGKVQLVPPAGAGPLGVAQVPQVLGGAGQRLTVPLKVVLQPQATSSTTPTSSGLSVVKVLTTTDLPAASGASGGAAGGVTALTTPDESRRLEHQKKQEKANRIVAEAIARARARGEQNIPRVLNEDELPNVRPEDESDRKRRRKAGGERGGKEERPRRGKGGQSGGKSKARGKASTITPVVGKKRKRNVSSDNSDSEALPTPSPRRDDDATVQKRRSNRQVKRKKYTEDLDIKITDDEEDEELDVTGPARPEQPPAPPPPEPDGAEALPSMQFFVENPSEEDAAIVDKVLSMRVVKKELPSGQVVEAEEFFVKYKNYSYLHCEWATIAQLEKDKRIHQKLKRFKTKMNQMRHFFHEDEEPFNPDYVEVDRILDESHSVDKDNGEPVVYYLVKWCSLPYEDSTWELQEDVDEAKIAEFKRIQARHPELKRQPRPQAAAWKKLESSREYKNHNRLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIAFLQEVHGAGVRGPYLVIAPLSTIANWEREFGTWTHLNTIVYHGSLASRQMIQQYEMYCKDGKGRLIPGAYKFDALITTFEMILSDCPELREVPWRCAVIDEAHRLKNRHCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPARFPSEGDFLRDFGDLKTEEQVQKLQALLKPMMLRRLKEDVEKNLAPKQETIIEVELTNAQKRLYRAILERNFAYLARGAGHGNVPNLLNTMMELRKCCNHPYLINGAEEQIVAELRSSPGAPAPPDLALQALVRSAGKLVLLDKLLPRLRAGGHKVLVFSQMVRCLDILEDYLIQKRYPYERIDGRVRGNLRQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGREGAIPGIQQFSKKEIEDLLRKGAYAAIMDEDDEGAKFCEEDIEQILLRRTTTITIESQGQGSTFAKASFVASENRSDIALDDPNFWQKWAKKAELDLELLNSKNTLVIDTPRVRKQTRHFSTLRDDDLVEFSDLDSDDDLERLDRATRSRRGHQHQNHHQNHQLHPQPPPPPPAGPAAPPPFGRSDCVRVEKHLMVYGWGRWRELAAQGRFKRRLSERDVENLGRAIVLFCLRHFRGDDGTRAFAGALLAPGHNGRARPAPGRKGKKAPKVPEAPAAEWLLQDENFRKHLRHQSGKLLQRVRALHVLRHEVIGAAAEPVLAGATASEVQISFPLLEPLEVPEPWWDPEADKSLLIGVFKHGYERYHTMRADPALCFLAKAGGPDATAVAAEQRLEGADFDRDPEDPEYKPLQGGGEESDPLAGLDEEISVVDGDEAVPMSGPTPPVSGPVVTSDPTVMSSPMVTSGPVVTSGPTPLSGPTPMSGPVVTSGPVVTSDPTTMSSPVVTTGSTPMSSSMVTSDPMVTTGPVVTSDPTAMSTPVVTSGPTPPMSTPVVTPGPVVTPGPGLGAWPAAAALTARLRRLLAACPRSGSGHRPDPQATEMAPGQPSGHSGGHSGGQSSGHSGGHHGGQTSGQPSGHSDGQPSGQPSGQPDGHSSGHSGGHSGGHSGGHSGGHSGGHSSGHSTGHSGHAERPRRPRRGHERREKQQRWTRREQADFLRVASTFGVELEPGSGRFRWGRFRALARLERRSDEDLTRFYHGFVAMCRQVCRLPPAPGDARRPPCPCPSSVPAPL…
SIO_010081: LOC115493013
subclass of: SO_0000673
so part of: LOC115493013
location: complement(join(109001..109189,110269..110307,110413..110499,111931..112032,114816..114986,115736..115951,118916..119242,120040..120263,122059..122267,123479..124295,125322..125376,125512..125575,126932..127037,127930..128033,130256..130345,131119..131221,131987..132177,134077..134360,136236..136346,137681..137860,138924..139091,140385..140580,141499..141712,143313..143568,145709..145852,149852..150028,152852..153095,154864..154985,156670..156807,159569..159652,160717..160834,161736..161791,161886..161954,165389..165574,166939..167053,171024..171421,173407..173766,176936..177530))
location: region:109001-177530:-1
so has part: feature:176936-177530:-1:exon
so has part: feature:173407-173766:-1:exon
so has part: feature:171024-171421:-1:exon
so has part: feature:166939-167053:-1:exon
so has part: feature:165389-165574:-1:exon
so has part: feature:161886-161954:-1:exon
so has part: feature:161736-161791:-1:exon
so has part: feature:160717-160834:-1:exon
so has part: feature:159569-159652:-1:exon
so has part: feature:156670-156807:-1:exon
so has part: feature:154864-154985:-1:exon
so has part: feature:152852-153095:-1:exon
so has part: feature:149852-150028:-1:exon
so has part: feature:145709-145852:-1:exon
so has part: feature:143313-143568:-1:exon
so has part: feature:141499-141712:-1:exon
so has part: feature:140385-140580:-1:exon
so has part: feature:138924-139091:-1:exon
so has part: feature:137681-137860:-1:exon
so has part: feature:136236-136346:-1:exon
so has part: feature:134077-134360:-1:exon
so has part: feature:131987-132177:-1:exon
so has part: feature:131119-131221:-1:exon
so has part: feature:130256-130345:-1:exon
so has part: feature:127930-128033:-1:exon
so has part: feature:126932-127037:-1:exon
so has part: feature:125512-125575:-1:exon
so has part: feature:125322-125376:-1:exon
so has part: feature:123479-124295:-1:exon
so has part: feature:122059-122267:-1:exon
so has part: feature:120040-120263:-1:exon
so has part: feature:118916-119242:-1:exon
so has part: feature:115736-115951:-1:exon
so has part: feature:114816-114986:-1:exon
so has part: feature:111931-112032:-1:exon
so has part: feature:110413-110499:-1:exon
so has part: feature:110269-110307:-1:exon
so has part: feature:109001-109189:-1:exon

XP_041568784.1
type: Protein
SIO_000068: ncbiprotein

position:109001:-1
position: 109001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:177530:-1
position: 177530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:176936-177530:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:173407-173766:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:171024-171421:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:166939-167053:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:165389-165574:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:161886-161954:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:161736-161791:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:160717-160834:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:159569-159652:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:156670-156807:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:154864-154985:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:152852-153095:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:149852-150028:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:145709-145852:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:143313-143568:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:141499-141712:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:140385-140580:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:138924-139091:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:137681-137860:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:136236-136346:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:134077-134360:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:131987-132177:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:131119-131221:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:130256-130345:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:127930-128033:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:126932-127037:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:125512-125575:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:125322-125376:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:123479-124295:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:122059-122267:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:120040-120263:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:118916-119242:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:115736-115951:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:114816-114986:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:111931-112032:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:110413-110499:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:110269-110307:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:109001-109189:-1:exon

LOC121468769
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121468769
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 186083..210269
location: region:186083-210269:1
so has part: feature:186083-210269:1:exon
subclass of: SO_0000010

121468769
type: Gene
SIO_000068: ncbigene

position:186083:1
position: 186083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:210269:1
position: 210269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:186083-210269:1:exon

LOC121468769
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC121468769
product: TOX high mobility group box family member 4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041712851.1
SIO_010081: LOC121468769
subclass of: SO_0000673
so part of: LOC121468769
location: join(186083..186143,188458..188526,190656..190886,191412..191558,193387..193785,196088..196361,197171..197221,197981..198099,199112..199393,203792..203944,206236..206490,207618..207787,210118..210269)
location: region:186083-210269:1
so has part: feature:186083-186143:1:exon
so has part: feature:188458-188526:1:exon
so has part: feature:190656-190886:1:exon
so has part: feature:191412-191558:1:exon
so has part: feature:193387-193785:1:exon
so has part: feature:196088-196361:1:exon
so has part: feature:197171-197221:1:exon
so has part: feature:197981-198099:1:exon
so has part: feature:199112-199393:1:exon
so has part: feature:203792-203944:1:exon
so has part: feature:206236-206490:1:exon
so has part: feature:207618-207787:1:exon
so has part: feature:210118-210269:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:186083-186143:1:exon

position:186143:1
position: 186143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:188458-188526:1:exon

position:188458:1
position: 188458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:188526:1
position: 188526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:190656-190886:1:exon

position:190656:1
position: 190656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:190886:1
position: 190886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:191412-191558:1:exon

position:191412:1
position: 191412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:191558:1
position: 191558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:193387-193785:1:exon

position:193387:1
position: 193387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:193785:1
position: 193785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:196088-196361:1:exon

position:196088:1
position: 196088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:196361:1
position: 196361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:197171-197221:1:exon

position:197171:1
position: 197171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:197221:1
position: 197221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:197981-198099:1:exon

position:197981:1
position: 197981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:198099:1
position: 198099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:199112-199393:1:exon

position:199112:1
position: 199112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:199393:1
position: 199393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:203792-203944:1:exon

position:203792:1
position: 203792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:203944:1
position: 203944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:206236-206490:1:exon

position:206236:1
position: 206236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:206490:1
position: 206490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:207618-207787:1:exon

position:207618:1
position: 207618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:207787:1
position: 207787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:210118-210269:1:exon

position:210118:1
position: 210118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121468769
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC121468769
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TOX high mobility group box family member 4-like
translation: MEFPGGSDNYLAITGTSHPFLSGAETFHTPSLGDEEFEIPPIPLDSDPSLAVVGHFEDLPEPGATPEAAFAPPGYGVGALELPVAVGLPPGIIEQPGGLLNMSLNGAGNGPKMWEFNPKMGGFNPKMGLELPVAVGLPPGIIEQPGGLLNMELDPPMASQFAPSAPVTIEVPLGALSPAALLGAAGALTTPLTTPLTTQLTTQLTTQLTTPLTTPLTTIDQSELSSQLGLGLGGASATPSPGHAPPGPAPAATPSPEHGLSPAPAAAGSPAGSPQDEEAEEFRRPSTAAPSPPSSVTPSSVSVPVPVPVPPEAPRRPKPPKEAKKEFWGETSEFPPKTQNSVPKSFQNLPFLGSKLGISSRNLLRSQKPLEIRDFSIDSCPIPAVGHTELGFALGPRPIPTIVGHTELGFGAGVGTPGGAAAAEAAQEGQEEPSAPAPSPPSAAPSSVSVPVPVPVPPEAPRRPKPPKKAKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEYLKALTAYKATLVTQKYPKIPQKYPQNIPKNPQKIHQRMPHRSPSPQAPPPPPPPLQPMRGPPPLQIKVLPLPPLHALPLPHPAPSPTPTPPQRGEGRPQPEEEEEMEEEEEEEMGAEPVVVPQVPSPPRLELVAVAESPPGAAEWPRGRCVRAGCENAPVASGDWDEEFCSSECLVRHCRDVFLAWLAARSAGSSSSNVVFVK
SIO_010081: LOC121468769
subclass of: SO_0000673
so part of: LOC121468769
location: join(186138..186143,188458..188526,190656..190886,191412..191558,193387..193785,196088..196361,197171..197221,197981..198099,199112..199393,203792..203944,206236..206490,207618..207787,210118..210190)
location: region:186138-210190:1
so has part: feature:186138-186143:1:exon
so has part: feature:188458-188526:1:exon
so has part: feature:190656-190886:1:exon
so has part: feature:191412-191558:1:exon
so has part: feature:193387-193785:1:exon
so has part: feature:196088-196361:1:exon
so has part: feature:197171-197221:1:exon
so has part: feature:197981-198099:1:exon
so has part: feature:199112-199393:1:exon
so has part: feature:203792-203944:1:exon
so has part: feature:206236-206490:1:exon
so has part: feature:207618-207787:1:exon
so has part: feature:210118-210190:1:exon

XP_041568785.1
type: Protein
SIO_000068: ncbiprotein

position:186138:1
position: 186138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:210190:1
position: 210190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:186138-186143:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:188458-188526:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:190656-190886:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:191412-191558:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:193387-193785:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:196088-196361:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:197171-197221:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:197981-198099:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:199112-199393:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:203792-203944:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:206236-206490:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:207618-207787:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:210118-210190:1:exon

LOC121468790
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121468790
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 200818..202692
location: region:200818-202692:1
so has part: feature:200818-202692:1:exon
subclass of: SO_0000011

121468790
type: Gene
SIO_000068: ncbigene

position:200818:1
position: 200818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:202692:1
position: 202692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:200818-202692:1:exon

LOC121468790
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC121468790
product: uncharacterized LOC121468790
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_005978575.1
SIO_010081: LOC121468790
subclass of: SO_0000673
so part of: LOC121468790
location: join(200818..201069,202635..202692)
location: region:200818-202692:1
so has part: feature:200818-201069:1:exon
so has part: feature:202635-202692:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:200818-201069:1:exon

position:201069:1
position: 201069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:202635-202692:1:exon

position:202635:1
position: 202635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

METTL3
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: METTL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(211855..232378)
location: region:211855-232378:-1
so has part: feature:211855-232378:-1:exon
subclass of: SO_0000010

115493047
type: Gene
SIO_000068: ncbigene

position:211855:-1
position: 211855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:232378:-1
position: 232378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:211855-232378:-1:exon

METTL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: METTL3
product: methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_041712910.1
SIO_010081: METTL3
subclass of: SO_0000673
so part of: METTL3
location: complement(join(211855..212009,213349..213461,215227..215292,216853..216961,217070..217108,218608..218795,221047..221275,223730..223905,227130..227453,230249..230520,232201..232378))
location: region:211855-232378:-1
so has part: feature:232201-232378:-1:exon
so has part: feature:230249-230520:-1:exon
so has part: feature:227130-227453:-1:exon
so has part: feature:223730-223905:-1:exon
so has part: feature:221047-221275:-1:exon
so has part: feature:218608-218795:-1:exon
so has part: feature:217070-217108:-1:exon
so has part: feature:216853-216961:-1:exon
so has part: feature:215227-215292:-1:exon
so has part: feature:213349-213461:-1:exon
so has part: feature:211855-212009:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:232201-232378:-1:exon

position:232201:-1
position: 232201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:230249-230520:-1:exon

position:230249:-1
position: 230249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:230520:-1
position: 230520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:227130-227453:-1:exon

position:227130:-1
position: 227130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:227453:-1
position: 227453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:223730-223905:-1:exon

position:223730:-1
position: 223730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:223905:-1
position: 223905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:221047-221275:-1:exon

position:221047:-1
position: 221047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:221275:-1
position: 221275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:218608-218795:-1:exon

position:218608:-1
position: 218608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:218795:-1
position: 218795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:217070-217108:-1:exon

position:217070:-1
position: 217070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:217108:-1
position: 217108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:216853-216961:-1:exon

position:216853:-1
position: 216853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:216961:-1
position: 216961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:215227-215292:-1:exon

position:215227:-1
position: 215227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:215292:-1
position: 215292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:213349-213461:-1:exon

position:213349:-1
position: 213349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:213461:-1
position: 213461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:211855-212009:-1:exon

position:212009:-1
position: 212009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

METTL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: METTL3
product: methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_041712911.1
SIO_010081: METTL3
subclass of: SO_0000673
so part of: METTL3
location: complement(join(211855..212009,213349..213461,215227..215292,216853..216961,217070..217108,218608..218795,221195..221275,223730..223905,227130..227453,230249..230520,232201..232328))
location: region:211855-232328:-1
so has part: feature:232201-232328:-1:exon
so has part: feature:230249-230520:-1:exon
so has part: feature:227130-227453:-1:exon
so has part: feature:223730-223905:-1:exon
so has part: feature:221195-221275:-1:exon
so has part: feature:218608-218795:-1:exon
so has part: feature:217070-217108:-1:exon
so has part: feature:216853-216961:-1:exon
so has part: feature:215227-215292:-1:exon
so has part: feature:213349-213461:-1:exon
so has part: feature:211855-212009:-1:exon

position:232328:-1
position: 232328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:232201-232328:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:230249-230520:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:227130-227453:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:223730-223905:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:221195-221275:-1:exon

position:221195:-1
position: 221195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:218608-218795:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:217070-217108:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:216853-216961:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:215227-215292:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:213349-213461:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:211855-212009:-1:exon

METTL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: METTL3
product: methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_041712912.1
SIO_010081: METTL3
subclass of: SO_0000673
so part of: METTL3
location: complement(join(211855..212009,213349..213461,215227..215292,218608..218795,221047..221275,223730..223905,227130..227453,230249..230520))
location: region:211855-230520:-1
so has part: feature:230249-230520:-1:exon
so has part: feature:227130-227453:-1:exon
so has part: feature:223730-223905:-1:exon
so has part: feature:221047-221275:-1:exon
so has part: feature:218608-218795:-1:exon
so has part: feature:215227-215292:-1:exon
so has part: feature:213349-213461:-1:exon
so has part: feature:211855-212009:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:230249-230520:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:227130-227453:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:223730-223905:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:221047-221275:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:218608-218795:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:215227-215292:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:213349-213461:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:211855-212009:-1:exon

METTL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: METTL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: N6-adenosine-methyltransferase catalytic subunit isoform X1
translation: MSDTWSSIQAHKKQLDSLRERLRRRRKRDPLGAADPCHDLSLATPPRTSSPAPSGPAPPCPAQGGVASLGPAPGSAPSPAGGPEGVPGEPPEPDPALERRLLLHLSDLATPLPADAAAIRGAIAGDDAQVTLRAVESLLHKFAAQELIELRRGLLHDGPALVTCADHSKLAAMAAAASSSGRRREAEPAGGAGEGKEAAKRCRRTAASAASDVDLEIESLLSQQSTKEQQSKKVSQEILELLNTTTAKEQSIVEKFRSRGRAQVQEFCDHGTTEECVKASGGERPCRRLHFRRIINKHTDESLGDCSFLNTCFHMDTCKYVHYEIDTCAATPPRGPAPPRPRPPAATPPAPPRGAPPDAGADRLFPPQWICCDIRYLDVSILGKFAVVMADPPWDIHMELPYGTLTDDEMRRLNIPVLQDEGFLFLWVTGRAMELGRECLNLWGYERVDEIIWVKTNQLQRIIRTGRTGHWLNHGKEHCLVGVKGNPQGFNRGLDCDVIVAEVRSTSHKPDEIYGMIERLSPGTRKIELFGRPHNVQPNWITLGNQLDGIHLLDPDVVARFKQHYPDGVIAKPKNL
SIO_010081: METTL3
subclass of: SO_0000673
so part of: METTL3
location: complement(join(211898..212009,213349..213461,215227..215292,216853..216961,217070..217108,218608..218795,221047..221275,223730..223905,227130..227453,230249..230520,232201..232303))
location: region:211898-232303:-1
so has part: feature:232201-232303:-1:exon
so has part: feature:230249-230520:-1:exon
so has part: feature:227130-227453:-1:exon
so has part: feature:223730-223905:-1:exon
so has part: feature:221047-221275:-1:exon
so has part: feature:218608-218795:-1:exon
so has part: feature:217070-217108:-1:exon
so has part: feature:216853-216961:-1:exon
so has part: feature:215227-215292:-1:exon
so has part: feature:213349-213461:-1:exon
so has part: feature:211898-212009:-1:exon

XP_041568844.1
type: Protein
SIO_000068: ncbiprotein

position:211898:-1
position: 211898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:232303:-1
position: 232303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:232201-232303:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:230249-230520:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:227130-227453:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:223730-223905:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:221047-221275:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:218608-218795:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:217070-217108:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:216853-216961:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:215227-215292:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:213349-213461:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:211898-212009:-1:exon

METTL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: METTL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: N6-adenosine-methyltransferase catalytic subunit isoform X2
translation: MPRPGGRGLARPRPRLRPLPRRGSRGGPGGAPGAGPGAGAAPPAAPVRPGHAPARRRRRHPRGHRRGRRSGDAAGCGEPPAQIRGAGTHRAAPGAAARRPRPRHLRRPLQTGRHGGGGVVVGASARGGAGRRRRGREGGGQEVPEDGGVGGVGRGFGDREPAESAVHQGAAEQEGEPGDPGAAEHHDGQGAVHRGEVPVAGPRAGAGVLRPRHHRGVRQGLGRGAALPPPALPPHHQQAHGRVPGRLFLPQHLFPHGHLQWICCDIRYLDVSILGKFAVVMADPPWDIHMELPYGTLTDDEMRRLNIPVLQDEGFLFLWVTGRAMELGRECLNLWGYERVDEIIWVKTNQLQRIIRTGRTGHWLNHGKEHCLVGVKGNPQGFNRGLDCDVIVAEVRSTSHKPDEIYGMIERLSPGTRKIELFGRPHNVQPNWITLGNQLDGIHLLDPDVVARFKQHYPDGVIAKPKNL
SIO_010081: METTL3
subclass of: SO_0000673
so part of: METTL3
location: complement(join(211898..212009,213349..213461,215227..215292,216853..216961,217070..217108,218608..218795,221195..221275,223730..223905,227130..227453,230249..230447))
location: region:211898-230447:-1
so has part: feature:230249-230447:-1:exon
so has part: feature:227130-227453:-1:exon
so has part: feature:223730-223905:-1:exon
so has part: feature:221195-221275:-1:exon
so has part: feature:218608-218795:-1:exon
so has part: feature:217070-217108:-1:exon
so has part: feature:216853-216961:-1:exon
so has part: feature:215227-215292:-1:exon
so has part: feature:213349-213461:-1:exon
so has part: feature:211898-212009:-1:exon

XP_041568845.1
type: Protein
SIO_000068: ncbiprotein

position:230447:-1
position: 230447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:230249-230447:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:227130-227453:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:223730-223905:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:221195-221275:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:218608-218795:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:217070-217108:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:216853-216961:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:215227-215292:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:213349-213461:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:211898-212009:-1:exon

METTL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: METTL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: N6-adenosine-methyltransferase catalytic subunit isoform X3
translation: MPRPGGRGLARPRPRLRPLPRRGSRGGPGGAPGAGPGAGAAPPAAPVRPGHAPARRRRRHPRGHRRGRRSGDAAGCGEPPAQIRGAGTHRAAPGAAARRPRPRHLRRPLQTGRHGGGGVVVGASARGGAGRRRRGREGGGQEVPEDGGVGGVGRGFGDREPAESAVHQGAAEQEGEPGDPGAAEHHDGQGAVHRGEVPVAGPRAGAGVLRPRHHRGVRQGLGRGAALPPPALPPHHQQAHGRVPGRLFLPQHLFPHGHLQVRPLRDRHLRGHAPPRPRPPAAPPTRGHAPRPAPRRPARRRRRPPLPATVDLLRHPLPGRVHPGKIRRGDGGPALGHPHGAALRDADGRRDAAPQHPRAAGRGVPLPLGHRQVGVKGNPQGFNRGLDCDVIVAEVRSTSHKPDEIYGMIERLSPGTRKIELFGRPHNVQPNWITLGNQLDGIHLLDPDVVARFKQHYPDGVIAKPKNL
SIO_010081: METTL3
subclass of: SO_0000673
so part of: METTL3
location: complement(join(211898..212009,213349..213461,215227..215292,218608..218795,221047..221275,223730..223905,227130..227453,230249..230447))
location: region:211898-230447:-1
so has part: feature:230249-230447:-1:exon
so has part: feature:227130-227453:-1:exon
so has part: feature:223730-223905:-1:exon
so has part: feature:221047-221275:-1:exon
so has part: feature:218608-218795:-1:exon
so has part: feature:215227-215292:-1:exon
so has part: feature:213349-213461:-1:exon
so has part: feature:211898-212009:-1:exon

XP_041568846.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:230249-230447:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:227130-227453:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:223730-223905:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:221047-221275:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:218608-218795:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:215227-215292:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:213349-213461:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:211898-212009:-1:exon

LOC115493062
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC115493062
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(234129..244284)
location: region:234129-244284:-1
so has part: feature:234129-244284:-1:exon
subclass of: SO_0000010

115493062
type: Gene
SIO_000068: ncbigene

position:234129:-1
position: 234129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:244284:-1
position: 244284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:234129-244284:-1:exon

LOC115493062
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC115493062
product: uncharacterized PPE family protein PPE40-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_041712906.1
SIO_010081: LOC115493062
subclass of: SO_0000673
so part of: LOC115493062
location: complement(join(234129..234326,234433..235635,236998..238006,238523..239009,244145..244284))
location: region:234129-244284:-1
so has part: feature:244145-244284:-1:exon
so has part: feature:238523-239009:-1:exon
so has part: feature:236998-238006:-1:exon
so has part: feature:234433-235635:-1:exon
so has part: feature:234129-234326:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:244145-244284:-1:exon

position:244145:-1
position: 244145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:238523-239009:-1:exon

position:238523:-1
position: 238523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:239009:-1
position: 239009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:236998-238006:-1:exon

position:236998:-1
position: 236998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:238006:-1
position: 238006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:234433-235635:-1:exon

position:234433:-1
position: 234433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:235635:-1
position: 235635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:234129-234326:-1:exon

position:234326:-1
position: 234326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115493062
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC115493062
product: uncharacterized PPE family protein PPE40-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_041712905.1
SIO_010081: LOC115493062
subclass of: SO_0000673
so part of: LOC115493062
location: complement(join(234129..234326,234433..235635,236998..237998,238374..238450,238502..239009,244145..244284))
location: region:234129-244284:-1
so has part: feature:244145-244284:-1:exon
so has part: feature:238502-239009:-1:exon
so has part: feature:238374-238450:-1:exon
so has part: feature:236998-237998:-1:exon
so has part: feature:234433-235635:-1:exon
so has part: feature:234129-234326:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:244145-244284:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:238502-239009:-1:exon

position:238502:-1
position: 238502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:238374-238450:-1:exon

position:238374:-1
position: 238374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:238450:-1
position: 238450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:236998-237998:-1:exon

position:237998:-1
position: 237998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:234433-235635:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:234129-234326:-1:exon

LOC115493062
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC115493062
product: uncharacterized PPE family protein PPE40-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_041712907.1
SIO_010081: LOC115493062
subclass of: SO_0000673
so part of: LOC115493062
location: complement(join(234129..234326,234433..235635,236998..237485,237630..237998,238374..239009,244145..244284))
location: region:234129-244284:-1
so has part: feature:244145-244284:-1:exon
so has part: feature:238374-239009:-1:exon
so has part: feature:237630-237998:-1:exon
so has part: feature:236998-237485:-1:exon
so has part: feature:234433-235635:-1:exon
so has part: feature:234129-234326:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:244145-244284:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:238374-239009:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:237630-237998:-1:exon

position:237630:-1
position: 237630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:236998-237485:-1:exon

position:237485:-1
position: 237485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:234433-235635:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:234129-234326:-1:exon

LOC115493062
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC115493062
product: uncharacterized PPE family protein PPE40-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_041712904.1
SIO_010081: LOC115493062
subclass of: SO_0000673
so part of: LOC115493062
location: complement(join(234129..234326,234433..235635,236998..237998,238374..239009,244145..244284))
location: region:234129-244284:-1
so has part: feature:244145-244284:-1:exon
so has part: feature:238374-239009:-1:exon
so has part: feature:236998-237998:-1:exon
so has part: feature:234433-235635:-1:exon
so has part: feature:234129-234326:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:244145-244284:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:238374-239009:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:236998-237998:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:234433-235635:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:234129-234326:-1:exon

LOC115493062
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC115493062
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized PPE family protein PPE40-like isoform X3
translation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
SIO_010081: LOC115493062
subclass of: SO_0000673
so part of: LOC115493062
location: complement(join(235295..235635,236998..238006,238523..239009,244145..244197))
location: region:235295-244197:-1
so has part: feature:244145-244197:-1:exon
so has part: feature:238523-239009:-1:exon
so has part: feature:236998-238006:-1:exon
so has part: feature:235295-235635:-1:exon

XP_041568840.1
type: Protein
SIO_000068: ncbiprotein

position:235295:-1
position: 235295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:244197:-1
position: 244197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:244145-244197:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:238523-239009:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:236998-238006:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:235295-235635:-1:exon

LOC115493062
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC115493062
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized PPE family protein PPE40-like isoform X2
translation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
SIO_010081: LOC115493062
subclass of: SO_0000673
so part of: LOC115493062
location: complement(join(235295..235635,236998..237998,238374..238450,238502..239009,244145..244197))
location: region:235295-244197:-1
so has part: feature:244145-244197:-1:exon
so has part: feature:238502-239009:-1:exon
so has part: feature:238374-238450:-1:exon
so has part: feature:236998-237998:-1:exon
so has part: feature:235295-235635:-1:exon

XP_041568839.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:244145-244197:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:238502-239009:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:238374-238450:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:236998-237998:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:235295-235635:-1:exon

LOC115493062
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC115493062
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized PPE family protein PPE40-like isoform X4
translation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
SIO_010081: LOC115493062
subclass of: SO_0000673
so part of: LOC115493062
location: complement(join(235295..235635,236998..237485,237630..237998,238374..239009,244145..244197))
location: region:235295-244197:-1
so has part: feature:244145-244197:-1:exon
so has part: feature:238374-239009:-1:exon
so has part: feature:237630-237998:-1:exon
so has part: feature:236998-237485:-1:exon
so has part: feature:235295-235635:-1:exon

XP_041568841.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:244145-244197:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:238374-239009:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:237630-237998:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:236998-237485:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:235295-235635:-1:exon

LOC115493062
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC115493062
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized PPE family protein PPE40-like isoform X1
translation: MTSFPAILFSRGHGGTRSPRRPLPPGAAAGAAADPGGAPAAAAAAVGADAADPGHLPPTPPLGGAGDAPKIRPGAAFPSAAETAAIRHRRRLGVHLRQRLVLGVDVGFFAVVGVDVGFDAVVGVDGAVVGVNVEFDGVVGSNVGFFIVVGSKIGFFIFVGSNIGFFTIVGSNVGFFIILEVNRVNVGFDVVIGVNGAVVGVNVEFFIIVGSNVGFFIIDGSKVGFFAIVGVNVGFFIIVGSNVGFFIILEVNRVNVGFFTIVGSNVGFFIIDGSNVGFFTIIGSNVGFFIFVGSKVGFFTIVGPNIELNAIVGSNIELNAIVGVNVGFFIIVGSNVGFFIIVGSNVGFFTIVGSKVGFDGIVGSNVELNTIIGVNVGPKVGFFIIDGPNVGFFIIVGSKVGFFTIVGFFAIVGSNVELNVIVGSNVGFFTIVGSIVGFSTIVGFFTIVGSNVGFFTIVGFFTIVGFFTIIGSIVGFFTIIGFFTIVGPNVDRDSPTGPAAAPSRLRFLRETVRQRQRAADPPPVAHGRTAVPLRPLRRPIHHPRQPQGAPSASPAARPRRRRRGLPGSGHAPSAWPRPLPPGRLPEHSGREFCKFGGKFRDFGTKFWNFGGEFLKFGWKFHRFGWKFHRFGWKFRHFGAKFRDFGGKFWNFGGEFHKFGGKFDSFEGKFRNFGWEF
SIO_010081: LOC115493062
subclass of: SO_0000673
so part of: LOC115493062
location: complement(join(235295..235635,236998..237998,238374..239009,244145..244197))
location: region:235295-244197:-1
so has part: feature:244145-244197:-1:exon
so has part: feature:238374-239009:-1:exon
so has part: feature:236998-237998:-1:exon
so has part: feature:235295-235635:-1:exon

XP_041568838.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:244145-244197:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:238374-239009:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:236998-237998:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:235295-235635:-1:exon

LOC121468789
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121468789
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 238112..238575
location: region:238112-238575:1
so has part: feature:238112-238575:1:exon
subclass of: SO_0000011

121468789
type: Gene
SIO_000068: ncbigene

position:238112:1
position: 238112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:238575:1
position: 238575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:238112-238575:1:exon

LOC121468789
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC121468789
product: uncharacterized LOC121468789
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XR_005978574.1
SIO_010081: LOC121468789
subclass of: SO_0000673
so part of: LOC121468789
location: join(238112..238201,238529..238575)
location: region:238112-238575:1
so has part: feature:238112-238201:1:exon
so has part: feature:238529-238575:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:238112-238201:1:exon

position:238201:1
position: 238201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:238529-238575:1:exon

position:238529:1
position: 238529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115493014
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC115493014
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(245969..247362)
location: region:245969-247362:-1
so has part: feature:245969-247362:-1:exon
subclass of: SO_0000010

115493014
type: Gene
SIO_000068: ncbigene

position:245969:-1
position: 245969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:247362:-1
position: 247362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:245969-247362:-1:exon

LOC115493014
type: Variable Segment
subclass of: SO_0000466
RO_0002162: 59729
gene: LOC115493014
standard name: immunoglobulin heavy variable 3-30-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 86% coverage of the annotated genomic feature by RNAseq alignments
SIO_010081: LOC115493014
subclass of: SO_0000673
so part of: LOC115493014
location: complement(join(245969..246529,247295..247362))
location: region:245969-247362:-1
so has part: feature:247295-247362:-1:exon
so has part: feature:245969-246529:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:247295-247362:-1:exon

position:247295:-1
position: 247295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:245969-246529:-1:exon

position:246529:-1
position: 246529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115493014
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC115493014
exception: rearrangement required for product
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: immunoglobulin heavy variable 3-30-like
SIO_010081: LOC115493014
subclass of: SO_0000673
so part of: LOC115493014
location: complement(join(245984..246529,247295..247362))
location: region:245984-247362:-1
so has part: feature:247295-247362:-1:exon
so has part: feature:245984-246529:-1:exon

position:245984:-1
position: 245984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:247295-247362:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:245984-246529:-1:exon

LOC115493015
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC115493015
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 247361..247970
location: region:247361-247970:1
so has part: feature:247361-247970:1:exon
subclass of: SO_0000010

115493015
type: Gene
SIO_000068: ncbigene

position:247361:1
position: 247361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:247970:1
position: 247970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:247361-247970:1:exon

LOC115493015
type: Variable Segment
subclass of: SO_0000466
RO_0002162: 59729
gene: LOC115493015
standard name: Ig heavy chain V region 914-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 84% coverage of the annotated genomic feature by RNAseq alignments
SIO_010081: LOC115493015
subclass of: SO_0000673
so part of: LOC115493015
location: join(247361..247423,247531..247970)
location: region:247361-247970:1
so has part: feature:247361-247423:1:exon
so has part: feature:247531-247970:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:247361-247423:1:exon

position:247423:1
position: 247423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:247531-247970:1:exon

position:247531:1
position: 247531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115493015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC115493015
exception: rearrangement required for product
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Ig heavy chain V region 914-like
SIO_010081: LOC115493015
subclass of: SO_0000673
so part of: LOC115493015
location: join(247361..247423,247531..247955)
location: region:247361-247955:1
so has part: feature:247361-247423:1:exon
so has part: feature:247531-247955:1:exon

position:247955:1
position: 247955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:247361-247423:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:247531-247955:1:exon

LOC115493016
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC115493016
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(248189..250408)
location: region:248189-250408:-1
so has part: feature:248189-250408:-1:exon
subclass of: SO_0000010

115493016
type: Gene
SIO_000068: ncbigene

position:248189:-1
position: 248189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:250408:-1
position: 250408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:248189-250408:-1:exon

LOC115493016
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC115493016
product: immunoglobulin gamma-1 heavy chain-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 122 Proteins, and 79% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041712852.1
SIO_010081: LOC115493016
subclass of: SO_0000673
so part of: LOC115493016
location: complement(join(248189..248909,250323..250408))
location: region:248189-250408:-1
so has part: feature:250323-250408:-1:exon
so has part: feature:248189-248909:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:250323-250408:-1:exon

position:250323:-1
position: 250323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:248189-248909:-1:exon

position:248909:-1
position: 248909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115493016
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC115493016
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: immunoglobulin gamma-1 heavy chain-like
translation: MRILGKSSRFAAKNVNFGQRFGAKNANFGPKFPQIGPKFPRIGPKFGAVTLLESGGXLQPPGGSLRLLCRGSGFDFGNFGMGWIRQRPGQGLEYVAGVNGDSARAWYAPSVRGRFRISRDNGQSSVTLAMNSLKDDDSALYFCAKIATAGYWGPADGDDVGADPTPGPEPTNIPKFPHSPPNLSCCWHQTVTVSPKLSRFSVAFSFDPNLTGSPQNSAFCAPDLSGGHC
SIO_010081: LOC115493016
subclass of: SO_0000673
so part of: LOC115493016
location: complement(join(248307..248909,250323..250408))
location: region:248307-250408:-1
so has part: feature:250323-250408:-1:exon
so has part: feature:248307-248909:-1:exon

XP_041568786.1
type: Protein
SIO_000068: ncbiprotein

position:248307:-1
position: 248307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:250323-250408:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:248307-248909:-1:exon

LOC115493017
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC115493017
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 252527..288413
location: region:252527-288413:1
so has part: feature:252527-288413:1:exon
subclass of: SO_0000010

115493017
type: Gene
SIO_000068: ncbigene

position:252527:1
position: 252527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:288413:1
position: 288413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:252527-288413:1:exon

LOC115493017
type: Constant Region
subclass of: SO_0001834
RO_0002162: 59729
gene: LOC115493017
standard name: Ig mu chain C region-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 9 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
SIO_010081: LOC115493017
subclass of: SO_0000673
so part of: LOC115493017
location: join(252527..252607,252690..253007,260701..260844,272418..272743,281208..281415,283504..283839,285343..285675,287869..288413)
location: region:252527-288413:1
so has part: feature:252527-252607:1:exon
so has part: feature:252690-253007:1:exon
so has part: feature:260701-260844:1:exon
so has part: feature:272418-272743:1:exon
so has part: feature:281208-281415:1:exon
so has part: feature:283504-283839:1:exon
so has part: feature:285343-285675:1:exon
so has part: feature:287869-288413:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:252527-252607:1:exon

position:252607:1
position: 252607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:252690-253007:1:exon

position:252690:1
position: 252690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:253007:1
position: 253007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:260701-260844:1:exon

position:260701:1
position: 260701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:260844:1
position: 260844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:272418-272743:1:exon

position:272418:1
position: 272418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:272743:1
position: 272743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:281208-281415:1:exon

position:281208:1
position: 281208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:281415:1
position: 281415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:283504-283839:1:exon

position:283504:1
position: 283504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:283839:1
position: 283839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:285343-285675:1:exon

position:285343:1
position: 285343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:285675:1
position: 285675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:287869-288413:1:exon

position:287869:1
position: 287869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115493017
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC115493017
exception: rearrangement required for product
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Ig mu chain C region-like
SIO_010081: LOC115493017
subclass of: SO_0000673
so part of: LOC115493017
location: join(252538..252607,252690..253007,260701..260844,272418..272743,281208..281415,283504..283839,285343..285675,287869..288278)
location: region:252538-288278:1
so has part: feature:252538-252607:1:exon
so has part: feature:252690-253007:1:exon
so has part: feature:260701-260844:1:exon
so has part: feature:272418-272743:1:exon
so has part: feature:281208-281415:1:exon
so has part: feature:283504-283839:1:exon
so has part: feature:285343-285675:1:exon
so has part: feature:287869-288278:1:exon

position:252538:1
position: 252538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:288278:1
position: 288278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:252538-252607:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:252690-253007:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:260701-260844:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:272418-272743:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:281208-281415:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:283504-283839:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:285343-285675:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:287869-288278:1:exon

LOC121468770
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121468770
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 288396..303286
location: region:288396-303286:1
so has part: feature:288396-303286:1:exon
subclass of: SO_0000010

121468770
type: Gene
SIO_000068: ncbigene

position:288396:1
position: 288396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:303286:1
position: 303286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:288396-303286:1:exon

LOC121468770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC121468770
exception: rearrangement required for product
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Ig heavy chain C region, membrane-bound form-like
SIO_010081: LOC121468770
subclass of: SO_0000673
so part of: LOC121468770
location: join(288396..288420,288973..289104,291922..292101,296029..296153,300717..300912,303153..303286)
location: region:288396-303286:1
so has part: feature:288396-288420:1:exon
so has part: feature:288973-289104:1:exon
so has part: feature:291922-292101:1:exon
so has part: feature:296029-296153:1:exon
so has part: feature:300717-300912:1:exon
so has part: feature:303153-303286:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:288396-288420:1:exon

position:288420:1
position: 288420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:288973-289104:1:exon

position:288973:1
position: 288973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:289104:1
position: 289104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:291922-292101:1:exon

position:291922:1
position: 291922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:292101:1
position: 292101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:296029-296153:1:exon

position:296029:1
position: 296029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:296153:1
position: 296153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:300717-300912:1:exon

position:300717:1
position: 300717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:300912:1
position: 300912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:303153-303286:1:exon

position:303153:1
position: 303153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121468770
type: Constant Region
subclass of: SO_0001834
RO_0002162: 59729
gene: LOC121468770
standard name: Ig heavy chain C region, membrane-bound form-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 58% coverage of the annotated genomic feature by RNAseq alignments
SIO_010081: LOC121468770
subclass of: SO_0000673
so part of: LOC121468770
location: join(288396..288420,288973..289104,291922..292101,296029..296153,300717..300912,303153..303286)
location: region:288396-303286:1
so has part: feature:288396-288420:1:exon
so has part: feature:288973-289104:1:exon
so has part: feature:291922-292101:1:exon
so has part: feature:296029-296153:1:exon
so has part: feature:300717-300912:1:exon
so has part: feature:303153-303286:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:288396-288420:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:288973-289104:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:291922-292101:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:296029-296153:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:300717-300912:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:303153-303286:1:exon

LOC121468771
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121468771
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(303906..>315058)
location: region:303906-315058:-1
so has part: feature:303906-315058:-1:exon
subclass of: SO_0000010

121468771
type: Gene
SIO_000068: ncbigene

position:303906:-1
position: 303906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:315058:-1
position: 315058
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:303906-315058:-1:exon

LOC121468771
type: Constant Region
subclass of: SO_0001834
RO_0002162: 59729
gene: LOC121468771
standard name: immunoglobulin heavy constant alpha 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
SIO_010081: LOC121468771
subclass of: SO_0000673
so part of: LOC121468771
location: complement(join(303906..304338,308818..309153,310454..310783,314584..>315058))
location: region:303906-315058:-1
so has part: feature:314584-315058:-1:exon
so has part: feature:310454-310783:-1:exon
so has part: feature:308818-309153:-1:exon
so has part: feature:303906-304338:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:314584-315058:-1:exon

position:314584:-1
position: 314584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:310454-310783:-1:exon

position:310454:-1
position: 310454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:310783:-1
position: 310783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:308818-309153:-1:exon

position:308818:-1
position: 308818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:309153:-1
position: 309153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:303906-304338:-1:exon

position:304338:-1
position: 304338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121468771
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC121468771
exception: rearrangement required for product
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: immunoglobulin heavy constant alpha 2-like
SIO_010081: LOC121468771
subclass of: SO_0000673
so part of: LOC121468771
location: complement(join(303941..304338,308818..309153,310454..310783,314584..>315058))
location: region:303941-315058:-1
so has part: feature:314584-315058:-1:exon
so has part: feature:310454-310783:-1:exon
so has part: feature:308818-309153:-1:exon
so has part: feature:303941-304338:-1:exon

position:303941:-1
position: 303941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:314584-315058:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:310454-310783:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:308818-309153:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:303941-304338:-1:exon

LOC121468772
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121468772
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 317084..342988
location: region:317084-342988:1
so has part: feature:317084-342988:1:exon
subclass of: SO_0000010

121468772
type: Gene
SIO_000068: ncbigene

position:317084:1
position: 317084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:342988:1
position: 342988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:317084-342988:1:exon

LOC121468772
type: Constant Region
subclass of: SO_0001834
RO_0002162: 59729
gene: LOC121468772
standard name: Ig gamma-2A chain C region-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, 6 Proteins, and 75% coverage of the annotated genomic feature by RNAseq alignments
SIO_010081: LOC121468772
subclass of: SO_0000673
so part of: LOC121468772
location: join(317084..317231,318026..318163,327915..328055,332152..332433,336775..337095,340170..340499,342571..342988)
location: region:317084-342988:1
so has part: feature:317084-317231:1:exon
so has part: feature:318026-318163:1:exon
so has part: feature:327915-328055:1:exon
so has part: feature:332152-332433:1:exon
so has part: feature:336775-337095:1:exon
so has part: feature:340170-340499:1:exon
so has part: feature:342571-342988:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:317084-317231:1:exon

position:317231:1
position: 317231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:318026-318163:1:exon

position:318026:1
position: 318026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:318163:1
position: 318163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:327915-328055:1:exon

position:327915:1
position: 327915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:328055:1
position: 328055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:332152-332433:1:exon

position:332152:1
position: 332152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:332433:1
position: 332433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:336775-337095:1:exon

position:336775:1
position: 336775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:337095:1
position: 337095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:340170-340499:1:exon

position:340170:1
position: 340170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:340499:1
position: 340499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:342571-342988:1:exon

position:342571:1
position: 342571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121468772
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC121468772
exception: rearrangement required for product
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Ig gamma-2A chain C region-like
SIO_010081: LOC121468772
subclass of: SO_0000673
so part of: LOC121468772
location: join(317084..317231,318026..318163,327915..328055,332152..332433,336775..337095,340170..340499,342571..342941)
location: region:317084-342941:1
so has part: feature:317084-317231:1:exon
so has part: feature:318026-318163:1:exon
so has part: feature:327915-328055:1:exon
so has part: feature:332152-332433:1:exon
so has part: feature:336775-337095:1:exon
so has part: feature:340170-340499:1:exon
so has part: feature:342571-342941:1:exon

position:342941:1
position: 342941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:317084-317231:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:318026-318163:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:327915-328055:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:332152-332433:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:336775-337095:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:340170-340499:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:342571-342941:1:exon

LOC121468797
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121468797
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(361246..368134)
location: region:361246-368134:-1
so has part: feature:361246-368134:-1:exon
subclass of: SO_0000010

121468797
type: Gene
SIO_000068: ncbigene

position:361246:-1
position: 361246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:368134:-1
position: 368134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:361246-368134:-1:exon

LOC121468797
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC121468797
product: uncharacterized LOC121468797
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_041712923.1
SIO_010081: LOC121468797
subclass of: SO_0000673
so part of: LOC121468797
location: complement(join(361246..362309,362634..363258,367770..368134))
location: region:361246-368134:-1
so has part: feature:367770-368134:-1:exon
so has part: feature:362634-363258:-1:exon
so has part: feature:361246-362309:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:367770-368134:-1:exon

position:367770:-1
position: 367770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:362634-363258:-1:exon

position:362634:-1
position: 362634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:363258:-1
position: 363258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:361246-362309:-1:exon

position:362309:-1
position: 362309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121468797
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC121468797
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC121468797
translation: MGRGLAMGQRLCGAALYRICCGAAAVLGWSGFPRAHSLLLAALVGLGPLLWGRGDPHSVLASPHNRLEARLTASAPAWTWLLIGSLLVASYPWLRPPWRSALRALARLAVAVALSRAGHALGHALEAATGSCTSPAPGGTLLLPIREPETCRGAGHRWEGFGPAPQAFDLVHCGLGLAEEAAALGRRIYGLGKMAAASKMAAGHKMAAMRKMDDPYKMADPYKMATTHKMADPYKMAAGSEMVERSKMADAPKMADPYKMADPYKMAAGYEMGERSKMAAWSKMAAWFKMLPWFKMAAGPKMAAGYKTGDESKMAAGSKMAAGSKMAAEHDTEEESKMAPWAWPRPTWRPIGFEWAEPSHANEGWAGPFWGGHFEGRHGGGHFEVERGGHFESGRHFASGRHFESGRHFDSGRHFEERHGGHFESGRHFASGRHFEERHGGHFASGRHFELQRGGHFDGGHFESGGHFESGGHFDPAFFLPHPGRHFDAPGGHFNPPGRHFDYPGGHFDPSGGHFDPSGGHFDPSRRRFFTTGGGGHLAGGHLGPPPAALSLLFLLAVLLLLTWHFLLVVTLLYRHSRARNAAGAALGWAGWALTYRGWYRRPWAPGPPGWG
SIO_010081: LOC121468797
subclass of: SO_0000673
so part of: LOC121468797
location: complement(join(361302..362309,362634..363258,367770..367975))
location: region:361302-367975:-1
so has part: feature:367770-367975:-1:exon
so has part: feature:362634-363258:-1:exon
so has part: feature:361302-362309:-1:exon

XP_041568857.1
type: Protein
SIO_000068: ncbiprotein

position:361302:-1
position: 361302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:367975:-1
position: 367975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:367770-367975:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:362634-363258:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:361302-362309:-1:exon

DCAF11
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: DCAF11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(371891..397796)
location: region:371891-397796:-1
so has part: feature:371891-397796:-1:exon
subclass of: SO_0000010

121468773
type: Gene
SIO_000068: ncbigene

position:371891:-1
position: 371891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:397796:-1
position: 397796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:371891-397796:-1:exon

DCAF11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: DCAF11
product: DDB1 and CUL4 associated factor 11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 4 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041712853.1
SIO_010081: DCAF11
subclass of: SO_0000673
so part of: DCAF11
location: complement(join(371891..372017,373292..373398,374530..374676,376745..376898,380829..381005,382846..382972,384384..384438,386850..386996,390730..390830,392627..392679,394006..394112,395291..395424,397650..397707,397790..397796))
location: region:371891-397796:-1
so has part: feature:397790-397796:-1:exon
so has part: feature:397650-397707:-1:exon
so has part: feature:395291-395424:-1:exon
so has part: feature:394006-394112:-1:exon
so has part: feature:392627-392679:-1:exon
so has part: feature:390730-390830:-1:exon
so has part: feature:386850-386996:-1:exon
so has part: feature:384384-384438:-1:exon
so has part: feature:382846-382972:-1:exon
so has part: feature:380829-381005:-1:exon
so has part: feature:376745-376898:-1:exon
so has part: feature:374530-374676:-1:exon
so has part: feature:373292-373398:-1:exon
so has part: feature:371891-372017:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:397790-397796:-1:exon

position:397790:-1
position: 397790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:397650-397707:-1:exon

position:397650:-1
position: 397650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:397707:-1
position: 397707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:395291-395424:-1:exon

position:395291:-1
position: 395291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:395424:-1
position: 395424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:394006-394112:-1:exon

position:394006:-1
position: 394006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:394112:-1
position: 394112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:392627-392679:-1:exon

position:392627:-1
position: 392627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:392679:-1
position: 392679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:390730-390830:-1:exon

position:390730:-1
position: 390730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:390830:-1
position: 390830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:386850-386996:-1:exon

position:386850:-1
position: 386850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:386996:-1
position: 386996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:384384-384438:-1:exon

position:384384:-1
position: 384384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:384438:-1
position: 384438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:382846-382972:-1:exon

position:382846:-1
position: 382846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:382972:-1
position: 382972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:380829-381005:-1:exon

position:380829:-1
position: 380829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:381005:-1
position: 381005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:376745-376898:-1:exon

position:376745:-1
position: 376745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:376898:-1
position: 376898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:374530-374676:-1:exon

position:374530:-1
position: 374530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:374676:-1
position: 374676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:373292-373398:-1:exon

position:373292:-1
position: 373292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:373398:-1
position: 373398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:371891-372017:-1:exon

position:372017:-1
position: 372017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DCAF11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: DCAF11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DDB1- and CUL4-associated factor 11
translation: MGGEGEGGEGLELPELRALLRRSGRGRLPEPELDSDSEPEPEPEPEPEEEEEEEEEGGGGAPEASGAAPPPPGPALQELWAELGGGGAGAGPERSLPRLVRQREWGRSFTREERNRLSSHFLPNHAAALEPHPQKVFCAVFADRGRRLLTACQDHFLRLFEVSGAGLRLLRATRGRQVGWSILDVALGPDGRQALYCSWASHVHAFDLHGEGDAHTALDFRPEDRRFAVFSLAVGPDGRDVMGGANDGCVYVYDRQAQRRVERVPAHEDDVNAVALADASGQLLLSGGDDGVVRAWDRRCLAEGPALTLAGHRDGLTFLHARGDGRYVVSNSKDQSAKLWDLRRPSGAAALAATRRAVARQSWDYRWQRAPRNARRAPPLPGDASLLTFRGHVVLHTLLRCRLAPAGAAPAMAAGSADGAILVYDVTTGRALRRLTNHGACVRDVSWSPEGAWLASASWDGTVRLWTYRDAEDAEGAELRLEGAWPPQGRGRGPE
SIO_010081: DCAF11
subclass of: SO_0000673
so part of: DCAF11
location: complement(join(371904..372017,373292..373398,374530..374676,376745..376898,380829..381005,382846..382972,384384..384438,386850..386996,390730..390830,392627..392679,394006..394112,395291..395424,397650..397707,397790..397796))
location: region:371904-397796:-1
so has part: feature:397790-397796:-1:exon
so has part: feature:397650-397707:-1:exon
so has part: feature:395291-395424:-1:exon
so has part: feature:394006-394112:-1:exon
so has part: feature:392627-392679:-1:exon
so has part: feature:390730-390830:-1:exon
so has part: feature:386850-386996:-1:exon
so has part: feature:384384-384438:-1:exon
so has part: feature:382846-382972:-1:exon
so has part: feature:380829-381005:-1:exon
so has part: feature:376745-376898:-1:exon
so has part: feature:374530-374676:-1:exon
so has part: feature:373292-373398:-1:exon
so has part: feature:371904-372017:-1:exon

XP_041568787.1
type: Protein
SIO_000068: ncbiprotein

position:371904:-1
position: 371904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:397790-397796:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:397650-397707:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:395291-395424:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:394006-394112:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:392627-392679:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:390730-390830:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:386850-386996:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:384384-384438:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:382846-382972:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:380829-381005:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:376745-376898:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:374530-374676:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:373292-373398:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:371904-372017:-1:exon

PABPN1
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: PABPN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(400180..415271)
location: region:400180-415271:-1
so has part: feature:400180-415271:-1:exon
subclass of: SO_0000010

121468793
type: Gene
SIO_000068: ncbigene

position:400180:-1
position: 400180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:415271:-1
position: 415271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:400180-415271:-1:exon

PABPN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: PABPN1
product: poly(A) binding protein nuclear 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 110 samples with support for all annotated introns
transcript id: XM_041712914.1
SIO_010081: PABPN1
subclass of: SO_0000673
so part of: PABPN1
location: complement(join(400180..400248,404025..404174,406101..406188,407668..407774,410531..410598,411723..411837,415125..415271))
location: region:400180-415271:-1
so has part: feature:415125-415271:-1:exon
so has part: feature:411723-411837:-1:exon
so has part: feature:410531-410598:-1:exon
so has part: feature:407668-407774:-1:exon
so has part: feature:406101-406188:-1:exon
so has part: feature:404025-404174:-1:exon
so has part: feature:400180-400248:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:415125-415271:-1:exon

position:415125:-1
position: 415125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:411723-411837:-1:exon

position:411723:-1
position: 411723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:411837:-1
position: 411837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:410531-410598:-1:exon

position:410531:-1
position: 410531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:410598:-1
position: 410598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:407668-407774:-1:exon

position:407668:-1
position: 407668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:407774:-1
position: 407774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:406101-406188:-1:exon

position:406101:-1
position: 406101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:406188:-1
position: 406188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:404025-404174:-1:exon

position:404025:-1
position: 404025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:404174:-1
position: 404174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:400180-400248:-1:exon

position:400248:-1
position: 400248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PABPN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: PABPN1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: polyadenylate-binding protein 2
translation: MEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSLEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKYSGHPKGFAYIEFSDKESVRTSMALDESLFRGRQIKVIPKRTNRPGISSTDRGFPRGRFRGRGGGYGSARSRFYSGYARPRARGYRGRSRATSWYSPY
SIO_010081: PABPN1
subclass of: SO_0000673
so part of: PABPN1
location: complement(join(400209..400248,404025..404174,406101..406188,407668..407774,410531..410598,411723..411804))
location: region:400209-411804:-1
so has part: feature:411723-411804:-1:exon
so has part: feature:410531-410598:-1:exon
so has part: feature:407668-407774:-1:exon
so has part: feature:406101-406188:-1:exon
so has part: feature:404025-404174:-1:exon
so has part: feature:400209-400248:-1:exon

XP_041568848.1
type: Protein
SIO_000068: ncbiprotein

position:400209:-1
position: 400209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:411804:-1
position: 411804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:411723-411804:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:410531-410598:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:407668-407774:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:406101-406188:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:404025-404174:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:400209-400248:-1:exon

LOC121468794
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121468794
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 419564..448416
location: region:419564-448416:1
so has part: feature:419564-448416:1:exon
subclass of: SO_0000010

121468794
type: Gene
SIO_000068: ncbigene

position:419564:1
position: 419564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:448416:1
position: 448416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:419564-448416:1:exon

LOC121468794
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC121468794
product: large neutral amino acids transporter small subunit 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 56 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041712915.1
SIO_010081: LOC121468794
subclass of: SO_0000673
so part of: LOC121468794
location: join(419564..419990,424171..424375,428254..428405,431180..431305,435922..436075,438589..438712,439545..439648,442832..442928,443991..444140,445856..446033,447365..448416)
location: region:419564-448416:1
so has part: feature:419564-419990:1:exon
so has part: feature:424171-424375:1:exon
so has part: feature:428254-428405:1:exon
so has part: feature:431180-431305:1:exon
so has part: feature:435922-436075:1:exon
so has part: feature:438589-438712:1:exon
so has part: feature:439545-439648:1:exon
so has part: feature:442832-442928:1:exon
so has part: feature:443991-444140:1:exon
so has part: feature:445856-446033:1:exon
so has part: feature:447365-448416:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:419564-419990:1:exon

position:419990:1
position: 419990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:424171-424375:1:exon

position:424171:1
position: 424171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:424375:1
position: 424375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:428254-428405:1:exon

position:428254:1
position: 428254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:428405:1
position: 428405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:431180-431305:1:exon

position:431180:1
position: 431180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:431305:1
position: 431305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:435922-436075:1:exon

position:435922:1
position: 435922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:436075:1
position: 436075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:438589-438712:1:exon

position:438589:1
position: 438589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:438712:1
position: 438712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:439545-439648:1:exon

position:439545:1
position: 439545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:439648:1
position: 439648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:442832-442928:1:exon

position:442832:1
position: 442832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:442928:1
position: 442928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:443991-444140:1:exon

position:443991:1
position: 443991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:444140:1
position: 444140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:445856-446033:1:exon

position:445856:1
position: 445856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:446033:1
position: 446033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:447365-448416:1:exon

position:447365:1
position: 447365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121468794
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC121468794
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: large neutral amino acids transporter small subunit 2-like
translation: MESGPKNRGKNPKKEEKEDEEEGGVALKKEIGLLSACGIIVGNIIGSGIFVAPRGVLAHAGAVGPALLIWGLSGAVTALGALCYAELGVALPRPGGDYAYVGHAFGPLVGFLRLWISVLVIYPTNQAVIALTFANYVLQPLFPTCGTPEPALRVLAAACLLVLTWVNCGSVRWATRVQDVFTAGKLLALALIVGAGAALIARGEHEWLRPSRAFPAGPGPGAGPLFLACLQGSFAYGGWNFLNYVTEELRQPRRNLPLAIGISIPLVTFLYVAANVAYLAALSPREILQSPAVAVTFGERVLGPLAWVMPLAVALSTFGGVNGSLFTCSRLFYAGAREGQLPALLAMIHVRRHTPVPALLLTCVSTLLMLVTGDIDTLINYVGFVNYLWYGVTVAGLLLLRRREPRLPRPIKVPLLCPALYLLFWGALLLFSLWTEPLVCGIGLAVTATGAPVYLLCLRGGPRPPALRRALARLTLFGQRLLLVVYPGGGGAPERPSPTPEPLKRPSPT
SIO_010081: LOC121468794
subclass of: SO_0000673
so part of: LOC121468794
location: join(419867..419990,424171..424375,428254..428405,431180..431305,435922..436075,438589..438712,439545..439648,442832..442928,443991..444140,445856..446033,447365..447480)
location: region:419867-447480:1
so has part: feature:419867-419990:1:exon
so has part: feature:424171-424375:1:exon
so has part: feature:428254-428405:1:exon
so has part: feature:431180-431305:1:exon
so has part: feature:435922-436075:1:exon
so has part: feature:438589-438712:1:exon
so has part: feature:439545-439648:1:exon
so has part: feature:442832-442928:1:exon
so has part: feature:443991-444140:1:exon
so has part: feature:445856-446033:1:exon
so has part: feature:447365-447480:1:exon

XP_041568849.1
type: Protein
SIO_000068: ncbiprotein

position:419867:1
position: 419867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:447480:1
position: 447480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:419867-419990:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:424171-424375:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:428254-428405:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:431180-431305:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:435922-436075:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:438589-438712:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:439545-439648:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:442832-442928:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:443991-444140:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:445856-446033:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:447365-447480:1:exon

ACIN1
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: ACIN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 450064..494653
location: region:450064-494653:1
so has part: feature:450064-494653:1:exon
subclass of: SO_0000010

121468780
type: Gene
SIO_000068: ncbigene

position:450064:1
position: 450064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:494653:1
position: 494653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:450064-494653:1:exon

ACIN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: ACIN1
product: apoptotic chromatin condensation inducer 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041712880.1
SIO_010081: ACIN1
subclass of: SO_0000673
so part of: ACIN1
location: join(450064..450266,454844..454909,456493..456589,459128..459198,460891..461272,461315..461478,461570..461610,469715..469772,475572..475611,477851..477972,479137..479340,481265..481481,483006..483154,484881..484988,486630..486737,488872..489286,492635..492735,494351..494653)
location: region:450064-494653:1
so has part: feature:450064-450266:1:exon
so has part: feature:454844-454909:1:exon
so has part: feature:456493-456589:1:exon
so has part: feature:459128-459198:1:exon
so has part: feature:460891-461272:1:exon
so has part: feature:461315-461478:1:exon
so has part: feature:461570-461610:1:exon
so has part: feature:469715-469772:1:exon
so has part: feature:475572-475611:1:exon
so has part: feature:477851-477972:1:exon
so has part: feature:479137-479340:1:exon
so has part: feature:481265-481481:1:exon
so has part: feature:483006-483154:1:exon
so has part: feature:484881-484988:1:exon
so has part: feature:486630-486737:1:exon
so has part: feature:488872-489286:1:exon
so has part: feature:492635-492735:1:exon
so has part: feature:494351-494653:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:450064-450266:1:exon

position:450266:1
position: 450266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:454844-454909:1:exon

position:454844:1
position: 454844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:454909:1
position: 454909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:456493-456589:1:exon

position:456493:1
position: 456493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:456589:1
position: 456589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:459128-459198:1:exon

position:459128:1
position: 459128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:459198:1
position: 459198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:460891-461272:1:exon

position:460891:1
position: 460891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:461272:1
position: 461272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:461315-461478:1:exon

position:461315:1
position: 461315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:461478:1
position: 461478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:461570-461610:1:exon

position:461570:1
position: 461570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:461610:1
position: 461610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:469715-469772:1:exon

position:469715:1
position: 469715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:469772:1
position: 469772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:475572-475611:1:exon

position:475572:1
position: 475572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:475611:1
position: 475611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:477851-477972:1:exon

position:477851:1
position: 477851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:477972:1
position: 477972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:479137-479340:1:exon

position:479137:1
position: 479137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:479340:1
position: 479340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:481265-481481:1:exon

position:481265:1
position: 481265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:481481:1
position: 481481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:483006-483154:1:exon

position:483006:1
position: 483006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:483154:1
position: 483154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:484881-484988:1:exon

position:484881:1
position: 484881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:484988:1
position: 484988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:486630-486737:1:exon

position:486630:1
position: 486630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:486737:1
position: 486737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:488872-489286:1:exon

position:488872:1
position: 488872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:489286:1
position: 489286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:492635-492735:1:exon

position:492635:1
position: 492635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:492735:1
position: 492735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:494351-494653:1:exon

position:494351:1
position: 494351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ACIN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: ACIN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: apoptotic chromatin condensation inducer in the nucleus
translation: MADGEEVTLDGRPLHLLRVADLKAALEQRGLAKSGQKSALIKRLRGALMLENLQKHSSPHPTFQPNSQMGEAMGQNSFIKQYLEKQQELLQQRRDAPEPHASEPGEEEEEEEEEGAGRKERRRMSRVAPPPSGPAPSGPAPRRRRPAPGAEDEDEEDEDDDEDEEEEEEDEETPKITEIAPKSPPEGAEPNPEVERKEAEPKQEEEKEEAEPMEATPLVEEATPTSGGSPSPPPLKGAGPEEEKGAELQIKGAELPEEGAELQMEGAEPPPPNLNAEAPPPPRPSPSSSSSSASSAPPSPPGGGAQEGAGPRRDTPPEESSEPAPPMEPRAAPGPAPPEATPRGVKRKIALLSARAGLEADGGGAGAGGPRRRRWGATAPKRPSISISTDSLKSLIPEIRAGGGAEPPEGGGDSAGGEGPEAEGDGPDKGGVACSGPAPGADPPPLLLPSPHLKICRTVTQVVPAPGENGRGEGQEEEEEGAESDEGGGACKPKPLPHPSTSPAPSGGGGATPGPAPPPAAATPTSGEGEGKGGEAPPPRRSGGAPWRGGGALLLPVDEPVRAAPRPSPPRQRPSPIVHLCNLVRPFTLGQLKELLGRTGRLKDDGFWIDRIKSHCFVTYCSVEEAVATREALHGVKWPQSNPKVLAADFAQQEELDFHRGLLAPPPSGSGPAPFPPHSRPSPPFPAGPAPSGGSGGVSPPCPAPRGAEPWQWAERERERHRRERERSREQREWDRGKSPAPPGTAPGTRPPGGGASQGHAPSGREGRGQRGTRPQGEKEKGRGQREARPERKEKPPEEPPAKLLDDLFRKTKAAPCIYWLPLTDSQLQQKQAERAARARERERRRKEQEEEELRTRQGGGAKEGGAKEGGASSGPAHPRTSGGGAGTRAPPGGSSRKRRSRSRSPRRR
SIO_010081: ACIN1
subclass of: SO_0000673
so part of: ACIN1
location: join(450129..450266,454844..454909,456493..456589,459128..459198,460891..461272,461315..461478,461570..461610,469715..469772,475572..475611,477851..477972,479137..479340,481265..481481,483006..483154,484881..484988,486630..486737,488872..489286,492635..492735,494351..494599)
location: region:450129-494599:1
so has part: feature:450129-450266:1:exon
so has part: feature:454844-454909:1:exon
so has part: feature:456493-456589:1:exon
so has part: feature:459128-459198:1:exon
so has part: feature:460891-461272:1:exon
so has part: feature:461315-461478:1:exon
so has part: feature:461570-461610:1:exon
so has part: feature:469715-469772:1:exon
so has part: feature:475572-475611:1:exon
so has part: feature:477851-477972:1:exon
so has part: feature:479137-479340:1:exon
so has part: feature:481265-481481:1:exon
so has part: feature:483006-483154:1:exon
so has part: feature:484881-484988:1:exon
so has part: feature:486630-486737:1:exon
so has part: feature:488872-489286:1:exon
so has part: feature:492635-492735:1:exon
so has part: feature:494351-494599:1:exon

XP_041568814.1
type: Protein
SIO_000068: ncbiprotein

position:450129:1
position: 450129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:494599:1
position: 494599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:450129-450266:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:454844-454909:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:456493-456589:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:459128-459198:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:460891-461272:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:461315-461478:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:461570-461610:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:469715-469772:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:475572-475611:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:477851-477972:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:479137-479340:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:481265-481481:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:483006-483154:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:484881-484988:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:486630-486737:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:488872-489286:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:492635-492735:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:494351-494599:1:exon

NGDN
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: NGDN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 498227..513058
location: region:498227-513058:1
so has part: feature:498227-513058:1:exon
subclass of: SO_0000010

121468795
type: Gene
SIO_000068: ncbigene

position:498227:1
position: 498227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:513058:1
position: 513058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:498227-513058:1:exon

NGDN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: NGDN
product: neuroguidin, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_041712918.1
SIO_010081: NGDN
subclass of: SO_0000673
so part of: NGDN
location: join(498227..499030,499129..499200,506311..506395,506481..506534,508285..508392,510175..510701)
location: region:498227-510701:1
so has part: feature:498227-499030:1:exon
so has part: feature:499129-499200:1:exon
so has part: feature:506311-506395:1:exon
so has part: feature:506481-506534:1:exon
so has part: feature:508285-508392:1:exon
so has part: feature:510175-510701:1:exon

position:510701:1
position: 510701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:498227-499030:1:exon

position:499030:1
position: 499030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:499129-499200:1:exon

position:499129:1
position: 499129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:499200:1
position: 499200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:506311-506395:1:exon

position:506311:1
position: 506311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:506395:1
position: 506395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:506481-506534:1:exon

position:506481:1
position: 506481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:506534:1
position: 506534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:508285-508392:1:exon

position:508285:1
position: 508285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:508392:1
position: 508392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:510175-510701:1:exon

position:510175:1
position: 510175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NGDN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: NGDN
product: neuroguidin, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_041712916.1
SIO_010081: NGDN
subclass of: SO_0000673
so part of: NGDN
location: join(498795..499030,499129..499200,503735..503875,506311..506395,506481..506533,508287..508392,510175..510673)
location: region:498795-510673:1
so has part: feature:498795-499030:1:exon
so has part: feature:499129-499200:1:exon
so has part: feature:503735-503875:1:exon
so has part: feature:506311-506395:1:exon
so has part: feature:506481-506533:1:exon
so has part: feature:508287-508392:1:exon
so has part: feature:510175-510673:1:exon

position:498795:1
position: 498795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:510673:1
position: 510673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:498795-499030:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:499129-499200:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:503735-503875:1:exon

position:503735:1
position: 503735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:503875:1
position: 503875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:506311-506395:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:506481-506533:1:exon

position:506533:1
position: 506533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:508287-508392:1:exon

position:508287:1
position: 508287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:510175-510673:1:exon

NGDN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: NGDN
product: neuroguidin, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_041712917.1
SIO_010081: NGDN
subclass of: SO_0000673
so part of: NGDN
location: join(498907..499030,499129..499200,503735..503875,506311..506395,506481..506534,508285..508392,510971..511130,512161..512293,512845..512911,513003..513058)
location: region:498907-513058:1
so has part: feature:498907-499030:1:exon
so has part: feature:499129-499200:1:exon
so has part: feature:503735-503875:1:exon
so has part: feature:506311-506395:1:exon
so has part: feature:506481-506534:1:exon
so has part: feature:508285-508392:1:exon
so has part: feature:510971-511130:1:exon
so has part: feature:512161-512293:1:exon
so has part: feature:512845-512911:1:exon
so has part: feature:513003-513058:1:exon

position:498907:1
position: 498907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:498907-499030:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:499129-499200:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:503735-503875:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:506311-506395:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:506481-506534:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:508285-508392:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:510971-511130:1:exon

position:510971:1
position: 510971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:511130:1
position: 511130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:512161-512293:1:exon

position:512161:1
position: 512161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:512293:1
position: 512293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:512845-512911:1:exon

position:512845:1
position: 512845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:512911:1
position: 512911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:513003-513058:1:exon

position:513003:1
position: 513003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NGDN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: NGDN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuroguidin isoform X2
translation: MAASEAVALLETLRAQAAEVAAHGRELLRRVRGGRLETREGLSLLELRPQLLLTYLQDLTLLAGSKARGGSLGLQGATLGRLLETRVVLEKLRPLEQRLRHLLEKLLRAAAAGGRGAEDPLSFRPAPFNMAAQEDEEEEDDEGRGGGAKAPGLGGGRRYVPPRLVPVACDPPEEPEQRSRLRARRRALTSLALRELREELGEGPLQEGAGPGPGHAPPQERHRRRWEESMLRRLSAPRRPRPQGAGPGLDDVTNLGAFPALLGAANQDSSEPPQKKRKKQKMGKKKGRKGFRRRRR
SIO_010081: NGDN
subclass of: SO_0000673
so part of: NGDN
location: join(498983..499030,499129..499200,503735..503875,506311..506395,506481..506534,508285..508392,510971..511130,512161..512293,512845..512911,513003..513025)
location: region:498983-513025:1
so has part: feature:498983-499030:1:exon
so has part: feature:499129-499200:1:exon
so has part: feature:503735-503875:1:exon
so has part: feature:506311-506395:1:exon
so has part: feature:506481-506534:1:exon
so has part: feature:508285-508392:1:exon
so has part: feature:510971-511130:1:exon
so has part: feature:512161-512293:1:exon
so has part: feature:512845-512911:1:exon
so has part: feature:513003-513025:1:exon

XP_041568851.1
type: Protein
SIO_000068: ncbiprotein

position:498983:1
position: 498983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:513025:1
position: 513025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:498983-499030:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:499129-499200:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:503735-503875:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:506311-506395:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:506481-506534:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:508285-508392:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:510971-511130:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:512161-512293:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:512845-512911:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:513003-513025:1:exon

NGDN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: NGDN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuroguidin isoform X1
translation: MAASEAVALLETLRAQAAEVAAHGRELLRRVRGGRLETREGLSLLELRPQLLLTYLQDLTLLAGSKARGGSLGLQGATLGRLLETRVVLEKLRPLEQRLRHLLEKLLRAAAAGGRGAEDPLSFRPAPFNMAAQDEEEEDDEGRGGGAKAPGLGGGRRYVPPRLVPVACDPPEEPEQRSRLRAWRRALTLFGRHFSPIFSPNFTVFSPFLTRISPFFHCFFAIFSYLTNIFVFHPILDPQEQPEQRFCLRAQHWALTLFGRHFSPVFYPNFAVFSPFFLQISPFFHRFSPFNQYFRFSPHFRPP
SIO_010081: NGDN
subclass of: SO_0000673
so part of: NGDN
location: join(498983..499030,499129..499200,503735..503875,506311..506395,506481..506533,508287..508392,510175..510581)
location: region:498983-510581:1
so has part: feature:498983-499030:1:exon
so has part: feature:499129-499200:1:exon
so has part: feature:503735-503875:1:exon
so has part: feature:506311-506395:1:exon
so has part: feature:506481-506533:1:exon
so has part: feature:508287-508392:1:exon
so has part: feature:510175-510581:1:exon

XP_041568850.1
type: Protein
SIO_000068: ncbiprotein

position:510581:1
position: 510581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:498983-499030:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:499129-499200:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:503735-503875:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:506311-506395:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:506481-506533:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:508287-508392:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:510175-510581:1:exon

NGDN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: NGDN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuroguidin isoform X3
translation: MAASEAVALLETLRAQAAEVAAHGRELLRRVRGGRLETREVLEKLRPLEQRLRHLLEKLLRAAAAGGRGAEDPLSFRPAPFNMAAQEDEEEEDDEGRGGGAKAPGLGGGRRYVPPRLVPVACDPPEEPEQRSRLRAWRRALTLFGRHFSPIFSPNFTVFSPFLTRISPFFHCFFAIFSYLTNIFVFHPILDPQEQPEQRFCLRAQHWALTLFGRHFSPVFYPNFAVFSPFFLQISPFFHRFSPFNQYFRFSPHFRPP
SIO_010081: NGDN
subclass of: SO_0000673
so part of: NGDN
location: join(498983..499030,499129..499200,506311..506395,506481..506534,508285..508392,510175..510581)
location: region:498983-510581:1
so has part: feature:498983-499030:1:exon
so has part: feature:499129-499200:1:exon
so has part: feature:506311-506395:1:exon
so has part: feature:506481-506534:1:exon
so has part: feature:508285-508392:1:exon
so has part: feature:510175-510581:1:exon

XP_041568852.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:498983-499030:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:499129-499200:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:506311-506395:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:506481-506534:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:508285-508392:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:510175-510581:1:exon

PSMB5
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: PSMB5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(516301..527596)
location: region:516301-527596:-1
so has part: feature:516301-527596:-1:exon
subclass of: SO_0000010

121468788
type: Gene
SIO_000068: ncbigene

position:516301:-1
position: 516301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:527596:-1
position: 527596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:516301-527596:-1:exon

PSMB5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: PSMB5
product: proteasome 20S subunit beta 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 ESTs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 121 samples with support for all annotated introns
transcript id: XM_041712903.1
SIO_010081: PSMB5
subclass of: SO_0000673
so part of: PSMB5
location: complement(join(516301..516619,522320..522626,526962..527596))
location: region:516301-527596:-1
so has part: feature:526962-527596:-1:exon
so has part: feature:522320-522626:-1:exon
so has part: feature:516301-516619:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:526962-527596:-1:exon

position:526962:-1
position: 526962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:522320-522626:-1:exon

position:522320:-1
position: 522320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:522626:-1
position: 522626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:516301-516619:-1:exon

position:516619:-1
position: 516619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PSMB5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: PSMB5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proteasome subunit beta type-5
translation: MPSTKMAPAPFSLPASPLINMATATSGTTSVRFAHAPPPFRAVCALPLTKMAPRPPHRRHFVGAEFPSPQLPGSKMALASVLRAELAEFSPNFPKNFPKNFPKNFPEDFPDDSEGIPEILRDPPGPPRVLAAPPWGFEAEPEGPGLQILHGTTTLAFKTPHGVTVAVDSRATAGSYIASQSVRKVLPIGGRMLGTMAGGAADCAFWQRLVARQCRVQELRNKEPVSVAAASKLLANLVYQYKGLGLSLGTMLCGWDKRGPGLYYVDSEGQRVAGAAFAVGSGSSYAYGVLDRGLAAAARSEEAACELARRAIAQAAHRDAYSGGCVRVMHVGPEGWREVSHHDIAELQEKYLE
SIO_010081: PSMB5
subclass of: SO_0000673
so part of: PSMB5
location: complement(join(516339..516619,522320..522626,526962..527435))
location: region:516339-527435:-1
so has part: feature:526962-527435:-1:exon
so has part: feature:522320-522626:-1:exon
so has part: feature:516339-516619:-1:exon

XP_041568837.1
type: Protein
SIO_000068: ncbiprotein

position:516339:-1
position: 516339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:527435:-1
position: 527435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:526962-527435:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:522320-522626:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:516339-516619:-1:exon

LOC121468796
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121468796
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 531031..548866
location: region:531031-548866:1
so has part: feature:531031-548866:1:exon
subclass of: SO_0000010

121468796
type: Gene
SIO_000068: ncbigene

position:531031:1
position: 531031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:548866:1
position: 548866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:531031-548866:1:exon

LOC121468796
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC121468796
product: dehydrogenase/reductase SDR family member 4-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_041712919.1
SIO_010081: LOC121468796
subclass of: SO_0000673
so part of: LOC121468796
location: join(531031..531148,535920..536037,537603..537662,538541..538642,541032..541102,542881..542932,545196..545330,548251..548335,548667..548866)
location: region:531031-548866:1
so has part: feature:531031-531148:1:exon
so has part: feature:535920-536037:1:exon
so has part: feature:537603-537662:1:exon
so has part: feature:538541-538642:1:exon
so has part: feature:541032-541102:1:exon
so has part: feature:542881-542932:1:exon
so has part: feature:545196-545330:1:exon
so has part: feature:548251-548335:1:exon
so has part: feature:548667-548866:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:531031-531148:1:exon

position:531148:1
position: 531148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:535920-536037:1:exon

position:535920:1
position: 535920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:536037:1
position: 536037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:537603-537662:1:exon

position:537603:1
position: 537603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:537662:1
position: 537662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:538541-538642:1:exon

position:538541:1
position: 538541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:538642:1
position: 538642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:541032-541102:1:exon

position:541032:1
position: 541032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:541102:1
position: 541102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:542881-542932:1:exon

position:542881:1
position: 542881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:542932:1
position: 542932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:545196-545330:1:exon

position:545196:1
position: 545196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:545330:1
position: 545330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:548251-548335:1:exon

position:548251:1
position: 548251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:548335:1
position: 548335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:548667-548866:1:exon

position:548667:1
position: 548667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121468796
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC121468796
product: dehydrogenase/reductase SDR family member 4-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_041712922.1
SIO_010081: LOC121468796
subclass of: SO_0000673
so part of: LOC121468796
location: join(531031..531148,535920..536037,537603..537662,538541..538642,541032..541102,542881..542932,545196..545330,546628..546683,548251..548335,548667..548758)
location: region:531031-548758:1
so has part: feature:531031-531148:1:exon
so has part: feature:535920-536037:1:exon
so has part: feature:537603-537662:1:exon
so has part: feature:538541-538642:1:exon
so has part: feature:541032-541102:1:exon
so has part: feature:542881-542932:1:exon
so has part: feature:545196-545330:1:exon
so has part: feature:546628-546683:1:exon
so has part: feature:548251-548335:1:exon
so has part: feature:548667-548758:1:exon

position:548758:1
position: 548758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:531031-531148:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:535920-536037:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:537603-537662:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:538541-538642:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:541032-541102:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:542881-542932:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:545196-545330:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:546628-546683:1:exon

position:546628:1
position: 546628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:546683:1
position: 546683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:548251-548335:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:548667-548758:1:exon

LOC121468796
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC121468796
product: dehydrogenase/reductase SDR family member 4-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_041712921.1
SIO_010081: LOC121468796
subclass of: SO_0000673
so part of: LOC121468796
location: join(531031..531148,535920..536037,537603..537662,538541..538642,541032..541102,542881..542932,545196..545330,546628..546683,548251..548335,548501..548598)
location: region:531031-548598:1
so has part: feature:531031-531148:1:exon
so has part: feature:535920-536037:1:exon
so has part: feature:537603-537662:1:exon
so has part: feature:538541-538642:1:exon
so has part: feature:541032-541102:1:exon
so has part: feature:542881-542932:1:exon
so has part: feature:545196-545330:1:exon
so has part: feature:546628-546683:1:exon
so has part: feature:548251-548335:1:exon
so has part: feature:548501-548598:1:exon

position:548598:1
position: 548598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:531031-531148:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:535920-536037:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:537603-537662:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:538541-538642:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:541032-541102:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:542881-542932:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:545196-545330:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:546628-546683:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:548251-548335:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:548501-548598:1:exon

position:548501:1
position: 548501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121468796
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC121468796
product: dehydrogenase/reductase SDR family member 4-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 72 samples with support for all annotated introns
transcript id: XM_041712920.1
SIO_010081: LOC121468796
subclass of: SO_0000673
so part of: LOC121468796
location: join(531031..531148,535920..536037,537603..537662,538541..538642,541032..541102,542881..542932,545196..545330,546628..546683,548251..548431)
location: region:531031-548431:1
so has part: feature:531031-531148:1:exon
so has part: feature:535920-536037:1:exon
so has part: feature:537603-537662:1:exon
so has part: feature:538541-538642:1:exon
so has part: feature:541032-541102:1:exon
so has part: feature:542881-542932:1:exon
so has part: feature:545196-545330:1:exon
so has part: feature:546628-546683:1:exon
so has part: feature:548251-548431:1:exon

position:548431:1
position: 548431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:531031-531148:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:535920-536037:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:537603-537662:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:538541-538642:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:541032-541102:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:542881-542932:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:545196-545330:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:546628-546683:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:548251-548431:1:exon

LOC121468796
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC121468796
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dehydrogenase/reductase SDR family member 4-like isoform X1
translation: MRLSAALGSVPRLLEGKVALVTAATDGIGLGVAEALGGAGARVFLSSRRPQNVQRALERLRGRGLQVSGTTCHVGRAEDRERMVQEALSTFGAIDILVSNAAVNPHLGPALEADERTWDKVFQVNVTAAAMLIQLVVPHMERRGGGAIVVMSSIAGYQPMAGLGPYSVSKTALLGLVSALSPELLPRGIRINGVAPGLIRTRFSAAAGLPAGRGSGRAVPGVPQRRLRGRTDPAGGRGGAAPPLTPPSSLICRFMLIRREIKSIILLHVGTGGYWFVLVCIGLYWEALGGVQTQL
SIO_010081: LOC121468796
subclass of: SO_0000673
so part of: LOC121468796
location: join(531069..531148,535920..536037,537603..537662,538541..538642,541032..541102,542881..542932,545196..545330,548251..548335,548667..548851)
location: region:531069-548851:1
so has part: feature:531069-531148:1:exon
so has part: feature:535920-536037:1:exon
so has part: feature:537603-537662:1:exon
so has part: feature:538541-538642:1:exon
so has part: feature:541032-541102:1:exon
so has part: feature:542881-542932:1:exon
so has part: feature:545196-545330:1:exon
so has part: feature:548251-548335:1:exon
so has part: feature:548667-548851:1:exon

XP_041568853.1
type: Protein
SIO_000068: ncbiprotein

position:531069:1
position: 531069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:548851:1
position: 548851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:531069-531148:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:535920-536037:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:537603-537662:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:538541-538642:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:541032-541102:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:542881-542932:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:545196-545330:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:548251-548335:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:548667-548851:1:exon

LOC121468796
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC121468796
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dehydrogenase/reductase SDR family member 4-like isoform X4
translation: MRLSAALGSVPRLLEGKVALVTAATDGIGLGVAEALGGAGARVFLSSRRPQNVQRALERLRGRGLQVSGTTCHVGRAEDRERMVQEALSTFGAIDILVSNAAVNPHLGPALEADERTWDKVFQVNVTAAAMLIQLVVPHMERRGGGAIVVMSSIAGYQPMAGLGPYSVSKTALLGLVSALSPELLPRGIRINGVAPGLIRTRFSAALWEDEATRDQALAALGAQRLGSPQDVAQAVLFLVSPSAAFVAGQTLLVAGGARPRL
SIO_010081: LOC121468796
subclass of: SO_0000673
so part of: LOC121468796
location: join(531069..531148,535920..536037,537603..537662,538541..538642,541032..541102,542881..542932,545196..545330,546628..546683,548251..548335,548667..548696)
location: region:531069-548696:1
so has part: feature:531069-531148:1:exon
so has part: feature:535920-536037:1:exon
so has part: feature:537603-537662:1:exon
so has part: feature:538541-538642:1:exon
so has part: feature:541032-541102:1:exon
so has part: feature:542881-542932:1:exon
so has part: feature:545196-545330:1:exon
so has part: feature:546628-546683:1:exon
so has part: feature:548251-548335:1:exon
so has part: feature:548667-548696:1:exon

XP_041568856.1
type: Protein
SIO_000068: ncbiprotein

position:548696:1
position: 548696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:531069-531148:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:535920-536037:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:537603-537662:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:538541-538642:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:541032-541102:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:542881-542932:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:545196-545330:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:546628-546683:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:548251-548335:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:548667-548696:1:exon

LOC121468796
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC121468796
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dehydrogenase/reductase SDR family member 4-like isoform X3
translation: MRLSAALGSVPRLLEGKVALVTAATDGIGLGVAEALGGAGARVFLSSRRPQNVQRALERLRGRGLQVSGTTCHVGRAEDRERMVQEALSTFGAIDILVSNAAVNPHLGPALEADERTWDKVFQVNVTAAAMLIQLVVPHMERRGGGAIVVMSSIAGYQPMAGLGPYSVSKTALLGLVSALSPELLPRGIRINGVAPGLIRTRFSAALWEDEATRDQALAALGAQRLGSPQDVAQAVLFLVSPSAAFVAGQTLLVAGGARPRL
SIO_010081: LOC121468796
subclass of: SO_0000673
so part of: LOC121468796
location: join(531069..531148,535920..536037,537603..537662,538541..538642,541032..541102,542881..542932,545196..545330,546628..546683,548251..548335,548501..548530)
location: region:531069-548530:1
so has part: feature:531069-531148:1:exon
so has part: feature:535920-536037:1:exon
so has part: feature:537603-537662:1:exon
so has part: feature:538541-538642:1:exon
so has part: feature:541032-541102:1:exon
so has part: feature:542881-542932:1:exon
so has part: feature:545196-545330:1:exon
so has part: feature:546628-546683:1:exon
so has part: feature:548251-548335:1:exon
so has part: feature:548501-548530:1:exon

XP_041568855.1
type: Protein
SIO_000068: ncbiprotein

position:548530:1
position: 548530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:531069-531148:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:535920-536037:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:537603-537662:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:538541-538642:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:541032-541102:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:542881-542932:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:545196-545330:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:546628-546683:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:548251-548335:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:548501-548530:1:exon

LOC121468796
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC121468796
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dehydrogenase/reductase SDR family member 4-like isoform X2
translation: MRLSAALGSVPRLLEGKVALVTAATDGIGLGVAEALGGAGARVFLSSRRPQNVQRALERLRGRGLQVSGTTCHVGRAEDRERMVQEALSTFGAIDILVSNAAVNPHLGPALEADERTWDKVFQVNVTAAAMLIQLVVPHMERRGGGAIVVMSSIAGYQPMAGLGPYSVSKTALLGLVSALSPELLPRGIRINGVAPGLIRTRFSAALWEDEATRDQALAALGAQRLGSPQDVAQAVLFLVSPSAAFVAGQTLLVAGGARPRL
SIO_010081: LOC121468796
subclass of: SO_0000673
so part of: LOC121468796
location: join(531069..531148,535920..536037,537603..537662,538541..538642,541032..541102,542881..542932,545196..545330,546628..546683,548251..548365)
location: region:531069-548365:1
so has part: feature:531069-531148:1:exon
so has part: feature:535920-536037:1:exon
so has part: feature:537603-537662:1:exon
so has part: feature:538541-538642:1:exon
so has part: feature:541032-541102:1:exon
so has part: feature:542881-542932:1:exon
so has part: feature:545196-545330:1:exon
so has part: feature:546628-546683:1:exon
so has part: feature:548251-548365:1:exon

XP_041568854.1
type: Protein
SIO_000068: ncbiprotein

position:548365:1
position: 548365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:531069-531148:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:535920-536037:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:537603-537662:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:538541-538642:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:541032-541102:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:542881-542932:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:545196-545330:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:546628-546683:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:548251-548365:1:exon

RBM23
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: RBM23
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(549536..595331)
location: region:549536-595331:-1
so has part: feature:549536-595331:-1:exon
subclass of: SO_0000010

121468779
type: Gene
SIO_000068: ncbigene

position:549536:-1
position: 549536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:595331:-1
position: 595331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:549536-595331:-1:exon

RBM23
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: RBM23
product: RNA binding motif protein 23, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041712878.1
SIO_010081: RBM23
subclass of: SO_0000673
so part of: RBM23
location: complement(join(549536..549698,549858..549926,551127..551196,555757..555855,559982..560276,565790..565855,569749..569886,574473..574625,578049..578166,581598..581651,583287..583421,587521..587562,589317..589363,591612..591659,594564..594638,594724..594804,595267..595331))
location: region:549536-595331:-1
so has part: feature:595267-595331:-1:exon
so has part: feature:594724-594804:-1:exon
so has part: feature:594564-594638:-1:exon
so has part: feature:591612-591659:-1:exon
so has part: feature:589317-589363:-1:exon
so has part: feature:587521-587562:-1:exon
so has part: feature:583287-583421:-1:exon
so has part: feature:581598-581651:-1:exon
so has part: feature:578049-578166:-1:exon
so has part: feature:574473-574625:-1:exon
so has part: feature:569749-569886:-1:exon
so has part: feature:565790-565855:-1:exon
so has part: feature:559982-560276:-1:exon
so has part: feature:555757-555855:-1:exon
so has part: feature:551127-551196:-1:exon
so has part: feature:549858-549926:-1:exon
so has part: feature:549536-549698:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:595267-595331:-1:exon

position:595267:-1
position: 595267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:594724-594804:-1:exon

position:594724:-1
position: 594724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:594804:-1
position: 594804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:594564-594638:-1:exon

position:594564:-1
position: 594564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:594638:-1
position: 594638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:591612-591659:-1:exon

position:591612:-1
position: 591612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:591659:-1
position: 591659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:589317-589363:-1:exon

position:589317:-1
position: 589317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:589363:-1
position: 589363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:587521-587562:-1:exon

position:587521:-1
position: 587521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:587562:-1
position: 587562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:583287-583421:-1:exon

position:583287:-1
position: 583287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:583421:-1
position: 583421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:581598-581651:-1:exon

position:581598:-1
position: 581598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:581651:-1
position: 581651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:578049-578166:-1:exon

position:578049:-1
position: 578049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:578166:-1
position: 578166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:574473-574625:-1:exon

position:574473:-1
position: 574473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:574625:-1
position: 574625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:569749-569886:-1:exon

position:569749:-1
position: 569749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:569886:-1
position: 569886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:565790-565855:-1:exon

position:565790:-1
position: 565790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:565855:-1
position: 565855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:559982-560276:-1:exon

position:559982:-1
position: 559982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:560276:-1
position: 560276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:555757-555855:-1:exon

position:555757:-1
position: 555757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:555855:-1
position: 555855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:551127-551196:-1:exon

position:551127:-1
position: 551127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:551196:-1
position: 551196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:549858-549926:-1:exon

position:549858:-1
position: 549858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:549926:-1
position: 549926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:549536-549698:-1:exon

position:549698:-1
position: 549698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RBM23
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: RBM23
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable RNA-binding protein 23 isoform X1
translation: MDSGGSKALPDPADAMTSDDFDIVIEAMLEAPYKKEEAQPGPSKAQPEPPPAQPPQEEPKEAKKESGSSSRKKRSRSREHRHSRSRDRERERRRRSRSRDRRSRHRSRSRERRRSRSRERRSRDERARRRFGHSKSPLYREKSPGREPLGSLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMAAPLQKGSGGPLRLYVGSLHCNITKDMLRGIFEPFGKIESIVLMRDPETGQSKGYGFITFSEAECARRALEQLNGFELAGRPMRVGQVSERPDGSSDVTFPEGTPGATPGATPGVTSSAMTSSGMTSSGITAPLTCGDEPELGTAAGRLQLMAKLAEGSGLQLPAPAQAALQQLNGALNPLGGLNPAALTALSPALNLASQCLTLSGLFSSQTM
SIO_010081: RBM23
subclass of: SO_0000673
so part of: RBM23
location: complement(join(549923..549926,551127..551196,555757..555855,559982..560276,565790..565855,569749..569886,574473..574625,578049..578166,581598..581651,583287..583421,587521..587562,589317..589363,591612..591659,594564..594638,594724..594759))
location: region:549923-594759:-1
so has part: feature:594724-594759:-1:exon
so has part: feature:594564-594638:-1:exon
so has part: feature:591612-591659:-1:exon
so has part: feature:589317-589363:-1:exon
so has part: feature:587521-587562:-1:exon
so has part: feature:583287-583421:-1:exon
so has part: feature:581598-581651:-1:exon
so has part: feature:578049-578166:-1:exon
so has part: feature:574473-574625:-1:exon
so has part: feature:569749-569886:-1:exon
so has part: feature:565790-565855:-1:exon
so has part: feature:559982-560276:-1:exon
so has part: feature:555757-555855:-1:exon
so has part: feature:551127-551196:-1:exon
so has part: feature:549923-549926:-1:exon

XP_041568812.1
type: Protein
SIO_000068: ncbiprotein

position:549923:-1
position: 549923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:594759:-1
position: 594759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:594724-594759:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:594564-594638:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:591612-591659:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:589317-589363:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:587521-587562:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:583287-583421:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:581598-581651:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:578049-578166:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:574473-574625:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:569749-569886:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:565790-565855:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:559982-560276:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:555757-555855:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:551127-551196:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:549923-549926:-1:exon

RBM23
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: RBM23
product: RNA binding motif protein 23, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041712879.1
SIO_010081: RBM23
subclass of: SO_0000673
so part of: RBM23
location: complement(join(551123..551196,555757..555855,559982..560276,565790..565855,569749..569886,574473..574625,578049..578166,581598..581651,583287..583421,587521..587562,589317..589363,591612..591659,594564..594638,594724..594804,595267..595331))
location: region:551123-595331:-1
so has part: feature:595267-595331:-1:exon
so has part: feature:594724-594804:-1:exon
so has part: feature:594564-594638:-1:exon
so has part: feature:591612-591659:-1:exon
so has part: feature:589317-589363:-1:exon
so has part: feature:587521-587562:-1:exon
so has part: feature:583287-583421:-1:exon
so has part: feature:581598-581651:-1:exon
so has part: feature:578049-578166:-1:exon
so has part: feature:574473-574625:-1:exon
so has part: feature:569749-569886:-1:exon
so has part: feature:565790-565855:-1:exon
so has part: feature:559982-560276:-1:exon
so has part: feature:555757-555855:-1:exon
so has part: feature:551123-551196:-1:exon

position:551123:-1
position: 551123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:595267-595331:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:594724-594804:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:594564-594638:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:591612-591659:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:589317-589363:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:587521-587562:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:583287-583421:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:581598-581651:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:578049-578166:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:574473-574625:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:569749-569886:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:565790-565855:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:559982-560276:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:555757-555855:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:551123-551196:-1:exon

RBM23
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: RBM23
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable RNA-binding protein 23 isoform X2
translation: MDSGGSKALPDPADAMTSDDFDIVIEAMLEAPYKKEEAQPGPSKAQPEPPPAQPPQEEPKEAKKESGSSSRKKRSRSREHRHSRSRDRERERRRRSRSRDRRSRHRSRSRERRRSRSRERRSRDERARRRFGHSKSPLYREKSPGREPLGSLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQASQAEKNRLAAMAAPLQKGSGGPLRLYVGSLHCNITKDMLRGIFEPFGKIESIVLMRDPETGQSKGYGFITFSEAECARRALEQLNGFELAGRPMRVGQVSERPDGSSDVTFPEGTPGATPGATPGVTSSAMTSSGMTSSGITAPLTCGDEPELGTAAGRLQLMAKLAEGSGLQLPAPAQAALQQLNGALNPLGGLNPAALTALSPALNLASQCLTLSGLFSSQTM
SIO_010081: RBM23
subclass of: SO_0000673
so part of: RBM23
location: complement(join(551123..551196,555757..555855,559982..560276,565790..565855,569749..569886,574473..574625,578049..578166,581598..581651,583287..583421,587521..587562,589317..589363,591612..591659,594564..594638,594724..594759))
location: region:551123-594759:-1
so has part: feature:594724-594759:-1:exon
so has part: feature:594564-594638:-1:exon
so has part: feature:591612-591659:-1:exon
so has part: feature:589317-589363:-1:exon
so has part: feature:587521-587562:-1:exon
so has part: feature:583287-583421:-1:exon
so has part: feature:581598-581651:-1:exon
so has part: feature:578049-578166:-1:exon
so has part: feature:574473-574625:-1:exon
so has part: feature:569749-569886:-1:exon
so has part: feature:565790-565855:-1:exon
so has part: feature:559982-560276:-1:exon
so has part: feature:555757-555855:-1:exon
so has part: feature:551123-551196:-1:exon

XP_041568813.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:594724-594759:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:594564-594638:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:591612-591659:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:589317-589363:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:587521-587562:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:583287-583421:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:581598-581651:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:578049-578166:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:574473-574625:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:569749-569886:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:565790-565855:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:559982-560276:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:555757-555855:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:551123-551196:-1:exon

PRMT5
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: PRMT5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(600636..662848)
location: region:600636-662848:-1
so has part: feature:600636-662848:-1:exon
subclass of: SO_0000010

121468778
type: Gene
SIO_000068: ncbigene

position:600636:-1
position: 600636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:662848:-1
position: 662848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:600636-662848:-1:exon

PRMT5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: PRMT5
product: protein arginine methyltransferase 5, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041712872.1
SIO_010081: PRMT5
subclass of: SO_0000673
so part of: PRMT5
location: complement(join(600636..600692,615172..615324,619247..619311,621717..621833,623081..623174,624298..624407,626665..626840,628808..628930,632485..632543,634420..634497,637903..638064,642038..642201,644284..644333,647854..647957,651396..651530,653601..653686,658460..658578,662704..662847))
location: region:600636-662847:-1
so has part: feature:662704-662847:-1:exon
so has part: feature:658460-658578:-1:exon
so has part: feature:653601-653686:-1:exon
so has part: feature:651396-651530:-1:exon
so has part: feature:647854-647957:-1:exon
so has part: feature:644284-644333:-1:exon
so has part: feature:642038-642201:-1:exon
so has part: feature:637903-638064:-1:exon
so has part: feature:634420-634497:-1:exon
so has part: feature:632485-632543:-1:exon
so has part: feature:628808-628930:-1:exon
so has part: feature:626665-626840:-1:exon
so has part: feature:624298-624407:-1:exon
so has part: feature:623081-623174:-1:exon
so has part: feature:621717-621833:-1:exon
so has part: feature:619247-619311:-1:exon
so has part: feature:615172-615324:-1:exon
so has part: feature:600636-600692:-1:exon

position:662847:-1
position: 662847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:662704-662847:-1:exon

position:662704:-1
position: 662704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:658460-658578:-1:exon

position:658460:-1
position: 658460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:658578:-1
position: 658578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:653601-653686:-1:exon

position:653601:-1
position: 653601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:653686:-1
position: 653686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:651396-651530:-1:exon

position:651396:-1
position: 651396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:651530:-1
position: 651530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:647854-647957:-1:exon

position:647854:-1
position: 647854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:647957:-1
position: 647957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:644284-644333:-1:exon

position:644284:-1
position: 644284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:644333:-1
position: 644333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:642038-642201:-1:exon

position:642038:-1
position: 642038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:642201:-1
position: 642201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:637903-638064:-1:exon

position:637903:-1
position: 637903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:638064:-1
position: 638064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:634420-634497:-1:exon

position:634420:-1
position: 634420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:634497:-1
position: 634497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:632485-632543:-1:exon

position:632485:-1
position: 632485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:632543:-1
position: 632543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:628808-628930:-1:exon

position:628808:-1
position: 628808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:628930:-1
position: 628930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:626665-626840:-1:exon

position:626665:-1
position: 626665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:626840:-1
position: 626840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:624298-624407:-1:exon

position:624298:-1
position: 624298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:624407:-1
position: 624407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:623081-623174:-1:exon

position:623081:-1
position: 623081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:623174:-1
position: 623174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:621717-621833:-1:exon

position:621717:-1
position: 621717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:621833:-1
position: 621833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:619247-619311:-1:exon

position:619247:-1
position: 619247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:619311:-1
position: 619311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:615172-615324:-1:exon

position:615172:-1
position: 615172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:615324:-1
position: 615324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:600636-600692:-1:exon

position:600692:-1
position: 600692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PRMT5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: PRMT5
product: protein arginine methyltransferase 5, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_041712873.1
SIO_010081: PRMT5
subclass of: SO_0000673
so part of: PRMT5
location: complement(join(606362..606400,615194..615324,619247..619311,621717..621833,623081..623174,624298..624407,626665..626840,628808..628930,632485..632543,634420..634497,637903..638064,642038..642201,644284..644333,647854..647957,651396..651530,653601..653686,658460..658578,662704..662848))
location: region:606362-662848:-1
so has part: feature:662704-662848:-1:exon
so has part: feature:658460-658578:-1:exon
so has part: feature:653601-653686:-1:exon
so has part: feature:651396-651530:-1:exon
so has part: feature:647854-647957:-1:exon
so has part: feature:644284-644333:-1:exon
so has part: feature:642038-642201:-1:exon
so has part: feature:637903-638064:-1:exon
so has part: feature:634420-634497:-1:exon
so has part: feature:632485-632543:-1:exon
so has part: feature:628808-628930:-1:exon
so has part: feature:626665-626840:-1:exon
so has part: feature:624298-624407:-1:exon
so has part: feature:623081-623174:-1:exon
so has part: feature:621717-621833:-1:exon
so has part: feature:619247-619311:-1:exon
so has part: feature:615194-615324:-1:exon
so has part: feature:606362-606400:-1:exon

position:606362:-1
position: 606362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:662704-662848:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:658460-658578:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:653601-653686:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:651396-651530:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:647854-647957:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:644284-644333:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:642038-642201:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:637903-638064:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:634420-634497:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:632485-632543:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:628808-628930:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:626665-626840:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:624298-624407:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:623081-623174:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:621717-621833:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:619247-619311:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:615194-615324:-1:exon

position:615194:-1
position: 615194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:606362-606400:-1:exon

position:606400:-1
position: 606400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PRMT5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: PRMT5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein arginine N-methyltransferase 5 isoform X4
translation: MAAGPGAAGTARVSSGRDLNCVPEVAGALGAVARQGFDFLCLPLFHPRHRREFSAPPARDRPGPQTRSDLVLAGRDWNTLIVGKLSPWIRPDSPLEHVRKNSQKALRQELDFGAYLGLAAHLVPLRGPHNPNLARGLSAHLHSGHHATQFWVQVPLVPPEESRDDVIGNEAPPPSGDEENTWEWWHNFRTLLDYNKRVALALELGPDLPSPAALARWLGEPVRAAFLPTRLFLTNKKGFPVLGRGHQRLLGQLLKLDVQIIVQGAPRHGGRPLAAYLQYLEHLGQHRPPPSAYELYARGYEDYLQSPLQPLMDNLESQTYEVFEKDPIKYCQYQQAIFKCLTDRVPEEERETNVQVVMVLGAGRGPLVAAALRAARQAGARLRLYAVEKNPNAVVTLENCQWEEWGSQVAVVARDMRGWAAPEAADLVVSELLGSFGDNELSPECLDGARGCLKEDGVSIPQSYTSFLAPVSSSKLYNEVRGCREHDRHPEAQFETPYVVRLHNFHQVAPPQPCFTFQHPNPDPCPDNSRYTELSWRVEVGTVLHGFAGYFETRLYGDVTLSIRPETHSPGLFSWFPIFFPIKQPVPVRAGQEVSVAFWRVATPTKVWYEWAVTAPACSALHNPTGRSYTIGL
SIO_010081: PRMT5
subclass of: SO_0000673
so part of: PRMT5
location: complement(join(606379..606400,615194..615324,619247..619311,621717..621833,623081..623174,624298..624407,626665..626840,628808..628930,632485..632543,634420..634497,637903..638064,642038..642201,644284..644333,647854..647957,651396..651530,653601..653686,658460..658578,662704..662810))
location: region:606379-662810:-1
so has part: feature:662704-662810:-1:exon
so has part: feature:658460-658578:-1:exon
so has part: feature:653601-653686:-1:exon
so has part: feature:651396-651530:-1:exon
so has part: feature:647854-647957:-1:exon
so has part: feature:644284-644333:-1:exon
so has part: feature:642038-642201:-1:exon
so has part: feature:637903-638064:-1:exon
so has part: feature:634420-634497:-1:exon
so has part: feature:632485-632543:-1:exon
so has part: feature:628808-628930:-1:exon
so has part: feature:626665-626840:-1:exon
so has part: feature:624298-624407:-1:exon
so has part: feature:623081-623174:-1:exon
so has part: feature:621717-621833:-1:exon
so has part: feature:619247-619311:-1:exon
so has part: feature:615194-615324:-1:exon
so has part: feature:606379-606400:-1:exon

XP_041568807.1
type: Protein
SIO_000068: ncbiprotein

position:606379:-1
position: 606379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:662810:-1
position: 662810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:662704-662810:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:658460-658578:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:653601-653686:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:651396-651530:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:647854-647957:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:644284-644333:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:642038-642201:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:637903-638064:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:634420-634497:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:632485-632543:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:628808-628930:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:626665-626840:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:624298-624407:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:623081-623174:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:621717-621833:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:619247-619311:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:615194-615324:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:606379-606400:-1:exon

PRMT5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: PRMT5
product: protein arginine methyltransferase 5, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_041712874.1
SIO_010081: PRMT5
subclass of: SO_0000673
so part of: PRMT5
location: complement(join(608658..608800,615194..615324,619247..619311,621717..621833,623081..623174,624298..624407,626665..626840,628808..628930,632485..632543,634420..634497,637903..638064,642038..642201,644284..644333,647854..647957,651396..651530,653601..653686,658460..658578,662704..662848))
location: region:608658-662848:-1
so has part: feature:662704-662848:-1:exon
so has part: feature:658460-658578:-1:exon
so has part: feature:653601-653686:-1:exon
so has part: feature:651396-651530:-1:exon
so has part: feature:647854-647957:-1:exon
so has part: feature:644284-644333:-1:exon
so has part: feature:642038-642201:-1:exon
so has part: feature:637903-638064:-1:exon
so has part: feature:634420-634497:-1:exon
so has part: feature:632485-632543:-1:exon
so has part: feature:628808-628930:-1:exon
so has part: feature:626665-626840:-1:exon
so has part: feature:624298-624407:-1:exon
so has part: feature:623081-623174:-1:exon
so has part: feature:621717-621833:-1:exon
so has part: feature:619247-619311:-1:exon
so has part: feature:615194-615324:-1:exon
so has part: feature:608658-608800:-1:exon

position:608658:-1
position: 608658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:662704-662848:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:658460-658578:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:653601-653686:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:651396-651530:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:647854-647957:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:644284-644333:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:642038-642201:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:637903-638064:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:634420-634497:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:632485-632543:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:628808-628930:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:626665-626840:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:624298-624407:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:623081-623174:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:621717-621833:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:619247-619311:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:615194-615324:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:608658-608800:-1:exon

position:608800:-1
position: 608800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PRMT5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: PRMT5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein arginine N-methyltransferase 5 isoform X5
translation: MAAGPGAAGTARVSSGRDLNCVPEVAGALGAVARQGFDFLCLPLFHPRHRREFSAPPARDRPGPQTRSDLVLAGRDWNTLIVGKLSPWIRPDSPLEHVRKNSQKALRQELDFGAYLGLAAHLVPLRGPHNPNLARGLSAHLHSGHHATQFWVQVPLVPPEESRDDVIGNEAPPPSGDEENTWEWWHNFRTLLDYNKRVALALELGPDLPSPAALARWLGEPVRAAFLPTRLFLTNKKGFPVLGRGHQRLLGQLLKLDVQIIVQGAPRHGGRPLAAYLQYLEHLGQHRPPPSAYELYARGYEDYLQSPLQPLMDNLESQTYEVFEKDPIKYCQYQQAIFKCLTDRVPEEERETNVQVVMVLGAGRGPLVAAALRAARQAGARLRLYAVEKNPNAVVTLENCQWEEWGSQVAVVARDMRGWAAPEAADLVVSELLGSFGDNELSPECLDGARGCLKEDGVSIPQSYTSFLAPVSSSKLYNEVRGCREHDRHPEAQFETPYVVRLHNFHQVAPPQPCFTFQHPNPDPCPDNSRYTELSWRVEVGTVLHGFAGYFETRLYGDVTLSIRPETHSPGLFSWFPIFFPIKQPVPVRAGQEVSVAFWRVATPTKVWYEWAVTAPACSALHNPTGRSYTIGL
SIO_010081: PRMT5
subclass of: SO_0000673
so part of: PRMT5
location: complement(join(608779..608800,615194..615324,619247..619311,621717..621833,623081..623174,624298..624407,626665..626840,628808..628930,632485..632543,634420..634497,637903..638064,642038..642201,644284..644333,647854..647957,651396..651530,653601..653686,658460..658578,662704..662810))
location: region:608779-662810:-1
so has part: feature:662704-662810:-1:exon
so has part: feature:658460-658578:-1:exon
so has part: feature:653601-653686:-1:exon
so has part: feature:651396-651530:-1:exon
so has part: feature:647854-647957:-1:exon
so has part: feature:644284-644333:-1:exon
so has part: feature:642038-642201:-1:exon
so has part: feature:637903-638064:-1:exon
so has part: feature:634420-634497:-1:exon
so has part: feature:632485-632543:-1:exon
so has part: feature:628808-628930:-1:exon
so has part: feature:626665-626840:-1:exon
so has part: feature:624298-624407:-1:exon
so has part: feature:623081-623174:-1:exon
so has part: feature:621717-621833:-1:exon
so has part: feature:619247-619311:-1:exon
so has part: feature:615194-615324:-1:exon
so has part: feature:608779-608800:-1:exon

XP_041568808.1
type: Protein
SIO_000068: ncbiprotein

position:608779:-1
position: 608779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:662704-662810:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:658460-658578:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:653601-653686:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:651396-651530:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:647854-647957:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:644284-644333:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:642038-642201:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:637903-638064:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:634420-634497:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:632485-632543:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:628808-628930:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:626665-626840:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:624298-624407:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:623081-623174:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:621717-621833:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:619247-619311:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:615194-615324:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:608779-608800:-1:exon

PRMT5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: PRMT5
product: protein arginine methyltransferase 5, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 66 samples with support for all annotated introns
transcript id: XM_041712870.1
SIO_010081: PRMT5
subclass of: SO_0000673
so part of: PRMT5
location: complement(join(613778..613860,615194..615324,619247..619311,621717..621833,623081..623174,624298..624407,626665..626840,628808..628930,632485..632543,634420..634497,637903..638064,642038..642201,644284..644333,647854..647957,651396..651530,653601..653686,658460..658578,662704..662847))
location: region:613778-662847:-1
so has part: feature:662704-662847:-1:exon
so has part: feature:658460-658578:-1:exon
so has part: feature:653601-653686:-1:exon
so has part: feature:651396-651530:-1:exon
so has part: feature:647854-647957:-1:exon
so has part: feature:644284-644333:-1:exon
so has part: feature:642038-642201:-1:exon
so has part: feature:637903-638064:-1:exon
so has part: feature:634420-634497:-1:exon
so has part: feature:632485-632543:-1:exon
so has part: feature:628808-628930:-1:exon
so has part: feature:626665-626840:-1:exon
so has part: feature:624298-624407:-1:exon
so has part: feature:623081-623174:-1:exon
so has part: feature:621717-621833:-1:exon
so has part: feature:619247-619311:-1:exon
so has part: feature:615194-615324:-1:exon
so has part: feature:613778-613860:-1:exon

position:613778:-1
position: 613778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:662704-662847:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:658460-658578:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:653601-653686:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:651396-651530:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:647854-647957:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:644284-644333:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:642038-642201:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:637903-638064:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:634420-634497:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:632485-632543:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:628808-628930:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:626665-626840:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:624298-624407:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:623081-623174:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:621717-621833:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:619247-619311:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:615194-615324:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:613778-613860:-1:exon

position:613860:-1
position: 613860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PRMT5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: PRMT5
product: protein arginine methyltransferase 5, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_041712871.1
SIO_010081: PRMT5
subclass of: SO_0000673
so part of: PRMT5
location: complement(join(613778..613804,615174..615324,619247..619311,621717..621833,623081..623174,624298..624407,626665..626840,628808..628930,632485..632543,634420..634497,637903..638064,642038..642201,644284..644333,647854..647957,651396..651530,653601..653686,658460..658578,662704..662847))
location: region:613778-662847:-1
so has part: feature:662704-662847:-1:exon
so has part: feature:658460-658578:-1:exon
so has part: feature:653601-653686:-1:exon
so has part: feature:651396-651530:-1:exon
so has part: feature:647854-647957:-1:exon
so has part: feature:644284-644333:-1:exon
so has part: feature:642038-642201:-1:exon
so has part: feature:637903-638064:-1:exon
so has part: feature:634420-634497:-1:exon
so has part: feature:632485-632543:-1:exon
so has part: feature:628808-628930:-1:exon
so has part: feature:626665-626840:-1:exon
so has part: feature:624298-624407:-1:exon
so has part: feature:623081-623174:-1:exon
so has part: feature:621717-621833:-1:exon
so has part: feature:619247-619311:-1:exon
so has part: feature:615174-615324:-1:exon
so has part: feature:613778-613804:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:662704-662847:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:658460-658578:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:653601-653686:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:651396-651530:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:647854-647957:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:644284-644333:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:642038-642201:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:637903-638064:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:634420-634497:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:632485-632543:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:628808-628930:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:626665-626840:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:624298-624407:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:623081-623174:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:621717-621833:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:619247-619311:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:615174-615324:-1:exon

position:615174:-1
position: 615174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:613778-613804:-1:exon

position:613804:-1
position: 613804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PRMT5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: PRMT5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein arginine N-methyltransferase 5 isoform X2
translation: MAAGPGAAGTARVSSGRDLNCVPEVAGALGAVARQGFDFLCLPLFHPRHRREFSAPPARDRPGPQTRSDLVLAGRDWNTLIVGKLSPWIRPDSPLEHVRKNSQKALRQELDFGAYLGLAAHLVPLRGPHNPNLARGLSAHLHSGHHATQFWVQVPLVPPEESRDDVIGNEAPPPSGDEENTWEWWHNFRTLLDYNKRVALALELGPDLPSPAALARWLGEPVRAAFLPTRLFLTNKKGFPVLGRGHQRLLGQLLKLDVQIIVQGAPRHGGRPLAAYLQYLEHLGQHRPPPSAYELYARGYEDYLQSPLQPLMDNLESQTYEVFEKDPIKYCQYQQAIFKCLTDRVPEEERETNVQVVMVLGAGRGPLVAAALRAARQAGARLRLYAVEKNPNAVVTLENCQWEEWGSQVAVVARDMRGWAAPEAADLVVSELLGSFGDNELSPECLDGARGCLKEDGVSIPQSYTSFLAPVSSSKLYNEVRGCREHDRHPEAQFETPYVVRLHNFHQVAPPQPCFTFQHPNPDPCPDNSRYTELSWRVEVGTVLHGFAGYFETRLYGDVTLSIRPETHSPGLFSWFPIFFPIKQPVPVRAGQEVSVAFWRVATPTKVWYEWAVTAPACSALHNPTGRSYTIGL
SIO_010081: PRMT5
subclass of: SO_0000673
so part of: PRMT5
location: complement(join(613803..613804,615174..615324,619247..619311,621717..621833,623081..623174,624298..624407,626665..626840,628808..628930,632485..632543,634420..634497,637903..638064,642038..642201,644284..644333,647854..647957,651396..651530,653601..653686,658460..658578,662704..662810))
location: region:613803-662810:-1
so has part: feature:662704-662810:-1:exon
so has part: feature:658460-658578:-1:exon
so has part: feature:653601-653686:-1:exon
so has part: feature:651396-651530:-1:exon
so has part: feature:647854-647957:-1:exon
so has part: feature:644284-644333:-1:exon
so has part: feature:642038-642201:-1:exon
so has part: feature:637903-638064:-1:exon
so has part: feature:634420-634497:-1:exon
so has part: feature:632485-632543:-1:exon
so has part: feature:628808-628930:-1:exon
so has part: feature:626665-626840:-1:exon
so has part: feature:624298-624407:-1:exon
so has part: feature:623081-623174:-1:exon
so has part: feature:621717-621833:-1:exon
so has part: feature:619247-619311:-1:exon
so has part: feature:615174-615324:-1:exon
so has part: feature:613803-613804:-1:exon

XP_041568805.1
type: Protein
SIO_000068: ncbiprotein

position:613803:-1
position: 613803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:662704-662810:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:658460-658578:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:653601-653686:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:651396-651530:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:647854-647957:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:644284-644333:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:642038-642201:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:637903-638064:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:634420-634497:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:632485-632543:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:628808-628930:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:626665-626840:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:624298-624407:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:623081-623174:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:621717-621833:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:619247-619311:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:615174-615324:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:613803-613804:-1:exon

PRMT5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: PRMT5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein arginine N-methyltransferase 5 isoform X1
translation: MAAGPGAAGTARVSSGRDLNCVPEVAGALGAVARQGFDFLCLPLFHPRHRREFSAPPARDRPGPQTRSDLVLAGRDWNTLIVGKLSPWIRPDSPLEHVRKNSQKALRQELDFGAYLGLAAHLVPLRGPHNPNLARGLSAHLHSGHHATQFWVQVPLVPPEESRDDVIGNEAPPPSGDEENTWEWWHNFRTLLDYNKRVALALELGPDLPSPAALARWLGEPVRAAFLPTRLFLTNKKGFPVLGRGHQRLLGQLLKLDVQIIVQGAPRHGGRPLAAYLQYLEHLGQHRPPPSAYELYARGYEDYLQSPLQPLMDNLESQTYEVFEKDPIKYCQYQQAIFKCLTDRVPEEERETNVQVVMVLGAGRGPLVAAALRAARQAGARLRLYAVEKNPNAVVTLENCQWEEWGSQVAVVARDMRGWAAPEAADLVVSELLGSFGDNELSPECLDGARGCLKEDGVSIPQSYTSFLAPVSSSKLYNEVRGCREHDRHPEAQFETPYVVRLHNFHQVAPPQPCFTFQHPNPDPCPDNSRYTELSWRVEVGTVLHGFAGYFETRLYGDVTLSIRPETHSPGLFSWFPIFFPIKQPVPVRAGQEVSVAFWRVATPTKVWYEWAVTAPACSALHNPTGRSYTIGL
SIO_010081: PRMT5
subclass of: SO_0000673
so part of: PRMT5
location: complement(join(613839..613860,615194..615324,619247..619311,621717..621833,623081..623174,624298..624407,626665..626840,628808..628930,632485..632543,634420..634497,637903..638064,642038..642201,644284..644333,647854..647957,651396..651530,653601..653686,658460..658578,662704..662810))
location: region:613839-662810:-1
so has part: feature:662704-662810:-1:exon
so has part: feature:658460-658578:-1:exon
so has part: feature:653601-653686:-1:exon
so has part: feature:651396-651530:-1:exon
so has part: feature:647854-647957:-1:exon
so has part: feature:644284-644333:-1:exon
so has part: feature:642038-642201:-1:exon
so has part: feature:637903-638064:-1:exon
so has part: feature:634420-634497:-1:exon
so has part: feature:632485-632543:-1:exon
so has part: feature:628808-628930:-1:exon
so has part: feature:626665-626840:-1:exon
so has part: feature:624298-624407:-1:exon
so has part: feature:623081-623174:-1:exon
so has part: feature:621717-621833:-1:exon
so has part: feature:619247-619311:-1:exon
so has part: feature:615194-615324:-1:exon
so has part: feature:613839-613860:-1:exon

XP_041568804.1
type: Protein
SIO_000068: ncbiprotein

position:613839:-1
position: 613839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:662704-662810:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:658460-658578:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:653601-653686:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:651396-651530:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:647854-647957:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:644284-644333:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:642038-642201:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:637903-638064:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:634420-634497:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:632485-632543:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:628808-628930:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:626665-626840:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:624298-624407:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:623081-623174:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:621717-621833:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:619247-619311:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:615194-615324:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:613839-613860:-1:exon

PRMT5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: PRMT5
product: protein arginine methyltransferase 5, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 64 samples with support for all annotated introns
transcript id: XM_041712875.1
SIO_010081: PRMT5
subclass of: SO_0000673
so part of: PRMT5
location: complement(join(615115..615321,619247..619311,621717..621833,623081..623174,624298..624407,626665..626840,628808..628930,632485..632543,634420..634497,637903..638064,642038..642201,644284..644333,647854..647957,651396..651530,653601..653686,658460..658578,662704..662848))
location: region:615115-662848:-1
so has part: feature:662704-662848:-1:exon
so has part: feature:658460-658578:-1:exon
so has part: feature:653601-653686:-1:exon
so has part: feature:651396-651530:-1:exon
so has part: feature:647854-647957:-1:exon
so has part: feature:644284-644333:-1:exon
so has part: feature:642038-642201:-1:exon
so has part: feature:637903-638064:-1:exon
so has part: feature:634420-634497:-1:exon
so has part: feature:632485-632543:-1:exon
so has part: feature:628808-628930:-1:exon
so has part: feature:626665-626840:-1:exon
so has part: feature:624298-624407:-1:exon
so has part: feature:623081-623174:-1:exon
so has part: feature:621717-621833:-1:exon
so has part: feature:619247-619311:-1:exon
so has part: feature:615115-615321:-1:exon

position:615115:-1
position: 615115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:662704-662848:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:658460-658578:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:653601-653686:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:651396-651530:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:647854-647957:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:644284-644333:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:642038-642201:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:637903-638064:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:634420-634497:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:632485-632543:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:628808-628930:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:626665-626840:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:624298-624407:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:623081-623174:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:621717-621833:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:619247-619311:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:615115-615321:-1:exon

position:615321:-1
position: 615321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PRMT5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: PRMT5
product: protein arginine methyltransferase 5, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_041712877.1
SIO_010081: PRMT5
subclass of: SO_0000673
so part of: PRMT5
location: complement(join(615115..615324,619247..619311,621717..621833,623081..623174,624298..624407,626665..626840,628808..628930,632485..632543,634420..634497,637903..638064,651396..651530,653601..653686,658460..658578,662704..662847))
location: region:615115-662847:-1
so has part: feature:662704-662847:-1:exon
so has part: feature:658460-658578:-1:exon
so has part: feature:653601-653686:-1:exon
so has part: feature:651396-651530:-1:exon
so has part: feature:637903-638064:-1:exon
so has part: feature:634420-634497:-1:exon
so has part: feature:632485-632543:-1:exon
so has part: feature:628808-628930:-1:exon
so has part: feature:626665-626840:-1:exon
so has part: feature:624298-624407:-1:exon
so has part: feature:623081-623174:-1:exon
so has part: feature:621717-621833:-1:exon
so has part: feature:619247-619311:-1:exon
so has part: feature:615115-615324:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:662704-662847:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:658460-658578:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:653601-653686:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:651396-651530:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:637903-638064:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:634420-634497:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:632485-632543:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:628808-628930:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:626665-626840:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:624298-624407:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:623081-623174:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:621717-621833:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:619247-619311:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:615115-615324:-1:exon

PRMT5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: PRMT5
product: protein arginine methyltransferase 5, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
transcript id: XM_041712876.1
SIO_010081: PRMT5
subclass of: SO_0000673
so part of: PRMT5
location: complement(join(615115..615324,619247..619311,621717..621833,623081..623174,624298..624407,626665..626840,628808..628930,632485..632543,634420..634497,642038..642201,644284..644333,647854..647957,651396..651530,653601..653686,658460..658578,662704..662847))
location: region:615115-662847:-1
so has part: feature:662704-662847:-1:exon
so has part: feature:658460-658578:-1:exon
so has part: feature:653601-653686:-1:exon
so has part: feature:651396-651530:-1:exon
so has part: feature:647854-647957:-1:exon
so has part: feature:644284-644333:-1:exon
so has part: feature:642038-642201:-1:exon
so has part: feature:634420-634497:-1:exon
so has part: feature:632485-632543:-1:exon
so has part: feature:628808-628930:-1:exon
so has part: feature:626665-626840:-1:exon
so has part: feature:624298-624407:-1:exon
so has part: feature:623081-623174:-1:exon
so has part: feature:621717-621833:-1:exon
so has part: feature:619247-619311:-1:exon
so has part: feature:615115-615324:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:662704-662847:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:658460-658578:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:653601-653686:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:651396-651530:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:647854-647957:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:644284-644333:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:642038-642201:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:634420-634497:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:632485-632543:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:628808-628930:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:626665-626840:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:624298-624407:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:623081-623174:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:621717-621833:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:619247-619311:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:615115-615324:-1:exon

PRMT5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: PRMT5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein arginine N-methyltransferase 5 isoform X8
translation: MAAGPGAAGTARVSSGRDLNCVPEVAGALGAVARQGFDFLCLPLFHPRHRREFSAPPARDRPGPQTRSDLVLAGRDWNTLIVGKLSPWIRPDSPLEHVRKNSQKALRQELDFGAYLGLAAHLVPLRGPHNPNLARGLSAHLHSGHHATQLDVQIIVQGAPRHGGRPLAAYLQYLEHLGQHRPPPSAYELYARGYEDYLQSPLQPLMDNLESQTYEVFEKDPIKYCQYQQAIFKCLTDRVPEEERETNVQVVMVLGAGRGPLVAAALRAARQAGARLRLYAVEKNPNAVVTLENCQWEEWGSQVAVVARDMRGWAAPEAADLVVSELLGSFGDNELSPECLDGARGCLKEDGVSIPQSYTSFLAPVSSSKLYNEVRGCREHDRHPEAQFETPYVVRLHNFHQVAPPQPCFTFQHPNPDPCPDNSRYTELSWRVEVGTVLHGFAGYFETRLYGDVTLSIRPETHSPGLFSWFPIFFPIKQPVPVRAGQEVSVAFWRVATPTKVWYEWAVTAPACSALHNPTGRSYTIGL
SIO_010081: PRMT5
subclass of: SO_0000673
so part of: PRMT5
location: complement(join(615172..615324,619247..619311,621717..621833,623081..623174,624298..624407,626665..626840,628808..628930,632485..632543,634420..634497,637903..638064,651396..651530,653601..653686,658460..658578,662704..662810))
location: region:615172-662810:-1
so has part: feature:662704-662810:-1:exon
so has part: feature:658460-658578:-1:exon
so has part: feature:653601-653686:-1:exon
so has part: feature:651396-651530:-1:exon
so has part: feature:637903-638064:-1:exon
so has part: feature:634420-634497:-1:exon
so has part: feature:632485-632543:-1:exon
so has part: feature:628808-628930:-1:exon
so has part: feature:626665-626840:-1:exon
so has part: feature:624298-624407:-1:exon
so has part: feature:623081-623174:-1:exon
so has part: feature:621717-621833:-1:exon
so has part: feature:619247-619311:-1:exon
so has part: feature:615172-615324:-1:exon

XP_041568811.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:662704-662810:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:658460-658578:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:653601-653686:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:651396-651530:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:637903-638064:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:634420-634497:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:632485-632543:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:628808-628930:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:626665-626840:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:624298-624407:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:623081-623174:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:621717-621833:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:619247-619311:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:615172-615324:-1:exon

PRMT5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: PRMT5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein arginine N-methyltransferase 5 isoform X7
translation: MAAGPGAAGTARVSSGRDLNCVPEVAGALGAVARQGFDFLCLPLFHPRHRREFSAPPARDRPGPQTRSDLVLAGRDWNTLIVGKLSPWIRPDSPLEHVRKNSQKALRQELDFGAYLGLAAHLVPLRGPHNPNLARGLSAHLHSGHHATQFWVQVPLVPPEESRDDVIGNEAPPPSGDEENTWEWWHNFRTLLDYNKRVALALELGPDLPSPAALARWLGEPVRAAFLPTRLFLTNKKGFPVLGRGHQRLLGQLLKPLMDNLESQTYEVFEKDPIKYCQYQQAIFKCLTDRVPEEERETNVQVVMVLGAGRGPLVAAALRAARQAGARLRLYAVEKNPNAVVTLENCQWEEWGSQVAVVARDMRGWAAPEAADLVVSELLGSFGDNELSPECLDGARGCLKEDGVSIPQSYTSFLAPVSSSKLYNEVRGCREHDRHPEAQFETPYVVRLHNFHQVAPPQPCFTFQHPNPDPCPDNSRYTELSWRVEVGTVLHGFAGYFETRLYGDVTLSIRPETHSPGLFSWFPIFFPIKQPVPVRAGQEVSVAFWRVATPTKVWYEWAVTAPACSALHNPTGRSYTIGL
SIO_010081: PRMT5
subclass of: SO_0000673
so part of: PRMT5
location: complement(join(615172..615324,619247..619311,621717..621833,623081..623174,624298..624407,626665..626840,628808..628930,632485..632543,634420..634497,642038..642201,644284..644333,647854..647957,651396..651530,653601..653686,658460..658578,662704..662810))
location: region:615172-662810:-1
so has part: feature:662704-662810:-1:exon
so has part: feature:658460-658578:-1:exon
so has part: feature:653601-653686:-1:exon
so has part: feature:651396-651530:-1:exon
so has part: feature:647854-647957:-1:exon
so has part: feature:644284-644333:-1:exon
so has part: feature:642038-642201:-1:exon
so has part: feature:634420-634497:-1:exon
so has part: feature:632485-632543:-1:exon
so has part: feature:628808-628930:-1:exon
so has part: feature:626665-626840:-1:exon
so has part: feature:624298-624407:-1:exon
so has part: feature:623081-623174:-1:exon
so has part: feature:621717-621833:-1:exon
so has part: feature:619247-619311:-1:exon
so has part: feature:615172-615324:-1:exon

XP_041568810.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:662704-662810:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:658460-658578:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:653601-653686:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:651396-651530:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:647854-647957:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:644284-644333:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:642038-642201:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:634420-634497:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:632485-632543:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:628808-628930:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:626665-626840:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:624298-624407:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:623081-623174:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:621717-621833:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:619247-619311:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:615172-615324:-1:exon

PRMT5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: PRMT5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein arginine N-methyltransferase 5 isoform X6
translation: MAAGPGAAGTARVSSGRDLNCVPEVAGALGAVARQGFDFLCLPLFHPRHRREFSAPPARDRPGPQTRSDLVLAGRDWNTLIVGKLSPWIRPDSPLEHVRKNSQKALRQELDFGAYLGLAAHLVPLRGPHNPNLARGLSAHLHSGHHATQFWVQVPLVPPEESRDDVIGNEAPPPSGDEENTWEWWHNFRTLLDYNKRVALALELGPDLPSPAALARWLGEPVRAAFLPTRLFLTNKKGFPVLGRGHQRLLGQLLKLDVQIIVQGAPRHGGRPLAAYLQYLEHLGQHRPPPSAYELYARGYEDYLQSPLQPLMDNLESQTYEVFEKDPIKYCQYQQAIFKCLTDRVPEEERETNVQVVMVLGAGRGPLVAAALRAARQAGARLRLYAVEKNPNAVVTLENCQWEEWGSQVAVVARDMRGWAAPEAADLVVSELLGSFGDNELSPECLDGARGCLKEDGVSIPQSYTSFLAPVSSSKLYNEVRGCREHDRHPEAQFETPYVVRLHNFHQVAPPQPCFTFQHPNPDPCPDNSRYTELSWRVEVGTVLHGFAGYFETRLYGDVTLSIRPETHSPGLFSWFPIFFPIKPVPVRAGQEVSVAFWRVATPTKVWYEWAVTAPACSALHNPTGRSYTIGL
SIO_010081: PRMT5
subclass of: SO_0000673
so part of: PRMT5
location: complement(join(615172..615321,619247..619311,621717..621833,623081..623174,624298..624407,626665..626840,628808..628930,632485..632543,634420..634497,637903..638064,642038..642201,644284..644333,647854..647957,651396..651530,653601..653686,658460..658578,662704..662810))
location: region:615172-662810:-1
so has part: feature:662704-662810:-1:exon
so has part: feature:658460-658578:-1:exon
so has part: feature:653601-653686:-1:exon
so has part: feature:651396-651530:-1:exon
so has part: feature:647854-647957:-1:exon
so has part: feature:644284-644333:-1:exon
so has part: feature:642038-642201:-1:exon
so has part: feature:637903-638064:-1:exon
so has part: feature:634420-634497:-1:exon
so has part: feature:632485-632543:-1:exon
so has part: feature:628808-628930:-1:exon
so has part: feature:626665-626840:-1:exon
so has part: feature:624298-624407:-1:exon
so has part: feature:623081-623174:-1:exon
so has part: feature:621717-621833:-1:exon
so has part: feature:619247-619311:-1:exon
so has part: feature:615172-615321:-1:exon

XP_041568809.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:662704-662810:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:658460-658578:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:653601-653686:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:651396-651530:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:647854-647957:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:644284-644333:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:642038-642201:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:637903-638064:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:634420-634497:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:632485-632543:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:628808-628930:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:626665-626840:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:624298-624407:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:623081-623174:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:621717-621833:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:619247-619311:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:615172-615321:-1:exon

PRMT5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: PRMT5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein arginine N-methyltransferase 5 isoform X3
translation: MAAGPGAAGTARVSSGRDLNCVPEVAGALGAVARQGFDFLCLPLFHPRHRREFSAPPARDRPGPQTRSDLVLAGRDWNTLIVGKLSPWIRPDSPLEHVRKNSQKALRQELDFGAYLGLAAHLVPLRGPHNPNLARGLSAHLHSGHHATQFWVQVPLVPPEESRDDVIGNEAPPPSGDEENTWEWWHNFRTLLDYNKRVALALELGPDLPSPAALARWLGEPVRAAFLPTRLFLTNKKGFPVLGRGHQRLLGQLLKLDVQIIVQGAPRHGGRPLAAYLQYLEHLGQHRPPPSAYELYARGYEDYLQSPLQPLMDNLESQTYEVFEKDPIKYCQYQQAIFKCLTDRVPEEERETNVQVVMVLGAGRGPLVAAALRAARQAGARLRLYAVEKNPNAVVTLENCQWEEWGSQVAVVARDMRGWAAPEAADLVVSELLGSFGDNELSPECLDGARGCLKEDGVSIPQSYTSFLAPVSSSKLYNEVRGCREHDRHPEAQFETPYVVRLHNFHQVAPPQPCFTFQHPNPDPCPDNSRYTELSWRVEVGTVLHGFAGYFETRLYGDVTLSIRPETHSPGLFSWFPIFFPIKQPVPVRAGQEVSVAFWRVATPTKVWYEWAVTAPACSALHNPTGRSYTIGL
SIO_010081: PRMT5
subclass of: SO_0000673
so part of: PRMT5
location: complement(join(615172..615324,619247..619311,621717..621833,623081..623174,624298..624407,626665..626840,628808..628930,632485..632543,634420..634497,637903..638064,642038..642201,644284..644333,647854..647957,651396..651530,653601..653686,658460..658578,662704..662810))
location: region:615172-662810:-1
so has part: feature:662704-662810:-1:exon
so has part: feature:658460-658578:-1:exon
so has part: feature:653601-653686:-1:exon
so has part: feature:651396-651530:-1:exon
so has part: feature:647854-647957:-1:exon
so has part: feature:644284-644333:-1:exon
so has part: feature:642038-642201:-1:exon
so has part: feature:637903-638064:-1:exon
so has part: feature:634420-634497:-1:exon
so has part: feature:632485-632543:-1:exon
so has part: feature:628808-628930:-1:exon
so has part: feature:626665-626840:-1:exon
so has part: feature:624298-624407:-1:exon
so has part: feature:623081-623174:-1:exon
so has part: feature:621717-621833:-1:exon
so has part: feature:619247-619311:-1:exon
so has part: feature:615172-615324:-1:exon

XP_041568806.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:662704-662810:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:658460-658578:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:653601-653686:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:651396-651530:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:647854-647957:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:644284-644333:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:642038-642201:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:637903-638064:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:634420-634497:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:632485-632543:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:628808-628930:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:626665-626840:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:624298-624407:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:623081-623174:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:621717-621833:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:619247-619311:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:615172-615324:-1:exon

MMP14
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: MMP14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 688912..732831
location: region:688912-732831:1
so has part: feature:688912-732831:1:exon
subclass of: SO_0000010

121468785
type: Gene
SIO_000068: ncbigene

position:688912:1
position: 688912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:732831:1
position: 732831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:688912-732831:1:exon

MMP14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: MMP14
product: matrix metallopeptidase 14
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 35 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041712900.1
SIO_010081: MMP14
subclass of: SO_0000673
so part of: MMP14
location: join(688912..689015,698206..698354,703536..703658,705606..705916,711955..712135,717698..717842,722533..722671,725312..725462,728079..728191,732254..732831)
location: region:688912-732831:1
so has part: feature:688912-689015:1:exon
so has part: feature:698206-698354:1:exon
so has part: feature:703536-703658:1:exon
so has part: feature:705606-705916:1:exon
so has part: feature:711955-712135:1:exon
so has part: feature:717698-717842:1:exon
so has part: feature:722533-722671:1:exon
so has part: feature:725312-725462:1:exon
so has part: feature:728079-728191:1:exon
so has part: feature:732254-732831:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:688912-689015:1:exon

position:689015:1
position: 689015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:698206-698354:1:exon

position:698206:1
position: 698206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:698354:1
position: 698354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:703536-703658:1:exon

position:703536:1
position: 703536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:703658:1
position: 703658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:705606-705916:1:exon

position:705606:1
position: 705606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:705916:1
position: 705916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:711955-712135:1:exon

position:711955:1
position: 711955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:712135:1
position: 712135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:717698-717842:1:exon

position:717698:1
position: 717698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:717842:1
position: 717842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:722533-722671:1:exon

position:722533:1
position: 722533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:722671:1
position: 722671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:725312-725462:1:exon

position:725312:1
position: 725312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:725462:1
position: 725462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:728079-728191:1:exon

position:728079:1
position: 728079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:728191:1
position: 728191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:732254-732831:1:exon

position:732254:1
position: 732254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MMP14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: MMP14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: matrix metalloproteinase-14
translation: MILGLLIFWGVLPPPAAPQPRFSPEAWLQQYGYLPPGDLRSRPRSAPASLSAALAAMQRFYGLPVTGTADAETLRAMLRPRCGVPDKFGPQVKAQVRRRRFALQGQRWEQPEITYSIQNYTPKVGEAGTRSAIRRAFQAWASAAPALRFREVPYGRIRSGAAPGADIMVMFAEGFHGDAAPFDGPGGFLAHAYFPGPNIGGDAHFDGAEPWTGRGDDLSGNDLFLVAVHELGHSLGLEHSSDPSAIMAPFYQWMDTEDFQLPEDDRRGIQQLYGEGGGGKLLLRPLPPPLPPPSGPAPPPPGPPYGPRICDGGFDTVAMLRGEMFVFKERWFWRLRGGQLMPGYPLPIGHFWAGLPPSIDAAYERSDGKFVFFKGSRHWVFDEGVLAPGYPRPLSELGRGVPSDRLDAALLWLPSGHTYLFRGDKYYRFNEALGAVDPDYPKSIEVWGVPPGPRGAFMGPDEAFTYFYRSHLYWKFDNSALRPLPGHPKSALRDWLNCPSPAPPTPPIGRDDAEVIVIALGAGPGALAAPLALLGLAGLLGGGAWLWRRRGGAAHAHLRRCQRSLLPRV
SIO_010081: MMP14
subclass of: SO_0000673
so part of: MMP14
location: join(688941..689015,698206..698354,703536..703658,705606..705916,711955..712135,717698..717842,722533..722671,725312..725462,728079..728191,732254..732576)
location: region:688941-732576:1
so has part: feature:688941-689015:1:exon
so has part: feature:698206-698354:1:exon
so has part: feature:703536-703658:1:exon
so has part: feature:705606-705916:1:exon
so has part: feature:711955-712135:1:exon
so has part: feature:717698-717842:1:exon
so has part: feature:722533-722671:1:exon
so has part: feature:725312-725462:1:exon
so has part: feature:728079-728191:1:exon
so has part: feature:732254-732576:1:exon

XP_041568834.1
type: Protein
SIO_000068: ncbiprotein

position:688941:1
position: 688941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:732576:1
position: 732576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:688941-689015:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:698206-698354:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:703536-703658:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:705606-705916:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:711955-712135:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:717698-717842:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:722533-722671:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:725312-725462:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:728079-728191:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:732254-732576:1:exon

MRPL52
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: MRPL52
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(734562..743095)
location: region:734562-743095:-1
so has part: feature:734562-743095:-1:exon
subclass of: SO_0000010

121468784
type: Gene
SIO_000068: ncbigene

position:734562:-1
position: 734562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:743095:-1
position: 743095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:734562-743095:-1:exon

MRPL52
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: MRPL52
product: mitochondrial ribosomal protein L52, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 55 samples with support for all annotated introns
transcript id: XM_041712897.1
SIO_010081: MRPL52
subclass of: SO_0000673
so part of: MRPL52
location: complement(join(734562..735296,737581..737645,740386..740453,742730..742799,743011..743095))
location: region:734562-743095:-1
so has part: feature:743011-743095:-1:exon
so has part: feature:742730-742799:-1:exon
so has part: feature:740386-740453:-1:exon
so has part: feature:737581-737645:-1:exon
so has part: feature:734562-735296:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:743011-743095:-1:exon

position:743011:-1
position: 743011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:742730-742799:-1:exon

position:742730:-1
position: 742730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:742799:-1
position: 742799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:740386-740453:-1:exon

position:740386:-1
position: 740386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:740453:-1
position: 740453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:737581-737645:-1:exon

position:737581:-1
position: 737581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:737645:-1
position: 737645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:734562-735296:-1:exon

position:735296:-1
position: 735296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MRPL52
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: MRPL52
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 39S ribosomal protein L52, mitochondrial isoform X1
translation: MAARRVLRLAERQARSLRPLPRPPQRIGQWREAQGLSPSPSGPGPLRDLPDWSFSDGRPSPPWRGQERRISESRELMVKRLRPHLRLCPLLATPTHLIRRMHDMQIYANEMENKSGFVATNADRRLLVCTGSYWFVLGGTGGQVWLRPHS
SIO_010081: MRPL52
subclass of: SO_0000673
so part of: MRPL52
location: complement(join(735075..735296,737581..737645,740386..740453,742730..742799,743011..743038))
location: region:735075-743038:-1
so has part: feature:743011-743038:-1:exon
so has part: feature:742730-742799:-1:exon
so has part: feature:740386-740453:-1:exon
so has part: feature:737581-737645:-1:exon
so has part: feature:735075-735296:-1:exon

XP_041568831.1
type: Protein
SIO_000068: ncbiprotein

position:735075:-1
position: 735075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:743038:-1
position: 743038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:743011-743038:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:742730-742799:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:740386-740453:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:737581-737645:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:735075-735296:-1:exon

MRPL52
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: MRPL52
product: mitochondrial ribosomal protein L52, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 118 samples with support for all annotated introns
transcript id: XM_041712899.1
SIO_010081: MRPL52
subclass of: SO_0000673
so part of: MRPL52
location: complement(join(735166..735296,735957..736035,737581..737645,740386..740453,742730..742799,743011..743095))
location: region:735166-743095:-1
so has part: feature:743011-743095:-1:exon
so has part: feature:742730-742799:-1:exon
so has part: feature:740386-740453:-1:exon
so has part: feature:737581-737645:-1:exon
so has part: feature:735957-736035:-1:exon
so has part: feature:735166-735296:-1:exon

position:735166:-1
position: 735166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:743011-743095:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:742730-742799:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:740386-740453:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:737581-737645:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:735957-736035:-1:exon

position:735957:-1
position: 735957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:736035:-1
position: 736035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:735166-735296:-1:exon

MRPL52
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: MRPL52
product: mitochondrial ribosomal protein L52, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_041712898.1
SIO_010081: MRPL52
subclass of: SO_0000673
so part of: MRPL52
location: complement(join(735166..735296,735957..736086,737581..737645,740386..740453,742730..742799,743011..743095))
location: region:735166-743095:-1
so has part: feature:743011-743095:-1:exon
so has part: feature:742730-742799:-1:exon
so has part: feature:740386-740453:-1:exon
so has part: feature:737581-737645:-1:exon
so has part: feature:735957-736086:-1:exon
so has part: feature:735166-735296:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:743011-743095:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:742730-742799:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:740386-740453:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:737581-737645:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:735957-736086:-1:exon

position:736086:-1
position: 736086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:735166-735296:-1:exon

MRPL52
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: MRPL52
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 39S ribosomal protein L52, mitochondrial isoform X3
translation: MAARRVLRLAERQARSLRPLPRPPQRIGQWREAQGLSPSPSGPGPLRDLPDWSFSDGRPSPPWRGQERRISESRELMCRAVALSRSLEAAKRRRSSQYKPVWTGEKAPPPPEALPTSGHAHSPYKKNA
SIO_010081: MRPL52
subclass of: SO_0000673
so part of: MRPL52
location: complement(join(735220..735296,735957..736035,737581..737645,740386..740453,742730..742799,743011..743038))
location: region:735220-743038:-1
so has part: feature:743011-743038:-1:exon
so has part: feature:742730-742799:-1:exon
so has part: feature:740386-740453:-1:exon
so has part: feature:737581-737645:-1:exon
so has part: feature:735957-736035:-1:exon
so has part: feature:735220-735296:-1:exon

XP_041568833.1
type: Protein
SIO_000068: ncbiprotein

position:735220:-1
position: 735220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:743011-743038:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:742730-742799:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:740386-740453:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:737581-737645:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:735957-736035:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:735220-735296:-1:exon

MRPL52
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: MRPL52
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 39S ribosomal protein L52, mitochondrial isoform X2
translation: MAARRVLRLAERQARSLRPLPRPPQRIGQWREAQGLSPSPSGPGPLRDLPDWSFSDGRPSPPWRGQERRISESRELMFAPVPSQYKPVTPSINQCRAVALSRSLEAAKRRRSSQYKPVWTGEKAPPPPEALPTSGHAHSPYKKNA
SIO_010081: MRPL52
subclass of: SO_0000673
so part of: MRPL52
location: complement(join(735220..735296,735957..736086,737581..737645,740386..740453,742730..742799,743011..743038))
location: region:735220-743038:-1
so has part: feature:743011-743038:-1:exon
so has part: feature:742730-742799:-1:exon
so has part: feature:740386-740453:-1:exon
so has part: feature:737581-737645:-1:exon
so has part: feature:735957-736086:-1:exon
so has part: feature:735220-735296:-1:exon

XP_041568832.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:743011-743038:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:742730-742799:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:740386-740453:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:737581-737645:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:735957-736086:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:735220-735296:-1:exon

OXA1L
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: OXA1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(744376..766122)
location: region:744376-766122:-1
so has part: feature:744376-766122:-1:exon
subclass of: SO_0000010

121468787
type: Gene
SIO_000068: ncbigene

position:744376:-1
position: 744376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:766122:-1
position: 766122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:744376-766122:-1:exon

OXA1L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: OXA1L
product: OXA1L mitochondrial inner membrane protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 77 samples with support for all annotated introns
transcript id: XM_041712902.1
SIO_010081: OXA1L
subclass of: SO_0000673
so part of: OXA1L
location: complement(join(744376..744519,744612..744692,747127..747364,748868..748972,756054..756218,757120..757205,759341..759484,762476..762662,765835..765903,765996..766122))
location: region:744376-766122:-1
so has part: feature:765996-766122:-1:exon
so has part: feature:765835-765903:-1:exon
so has part: feature:762476-762662:-1:exon
so has part: feature:759341-759484:-1:exon
so has part: feature:757120-757205:-1:exon
so has part: feature:756054-756218:-1:exon
so has part: feature:748868-748972:-1:exon
so has part: feature:747127-747364:-1:exon
so has part: feature:744612-744692:-1:exon
so has part: feature:744376-744519:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:765996-766122:-1:exon

position:765996:-1
position: 765996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:765835-765903:-1:exon

position:765835:-1
position: 765835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:765903:-1
position: 765903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:762476-762662:-1:exon

position:762476:-1
position: 762476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:762662:-1
position: 762662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:759341-759484:-1:exon

position:759341:-1
position: 759341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:759484:-1
position: 759484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:757120-757205:-1:exon

position:757120:-1
position: 757120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:757205:-1
position: 757205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:756054-756218:-1:exon

position:756054:-1
position: 756054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:756218:-1
position: 756218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:748868-748972:-1:exon

position:748868:-1
position: 748868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:748972:-1
position: 748972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:747127-747364:-1:exon

position:747127:-1
position: 747127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:747364:-1
position: 747364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:744612-744692:-1:exon

position:744612:-1
position: 744612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:744692:-1
position: 744692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:744376-744519:-1:exon

position:744519:-1
position: 744519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

OXA1L
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 59729
gene: OXA1L
product: OXA1L mitochondrial inner membrane protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 66 samples with support for all annotated introns
transcript id: XR_005978573.1
SIO_010081: OXA1L
so part of: OXA1L
location: complement(join(744376..744519,744612..744728,747127..747364,748868..748972,756054..756218,757120..757205,759341..759484,762476..762662,765835..765903,765996..766122))
location: region:744376-766122:-1
so has part: feature:765996-766122:-1:exon
so has part: feature:765835-765903:-1:exon
so has part: feature:762476-762662:-1:exon
so has part: feature:759341-759484:-1:exon
so has part: feature:757120-757205:-1:exon
so has part: feature:756054-756218:-1:exon
so has part: feature:748868-748972:-1:exon
so has part: feature:747127-747364:-1:exon
so has part: feature:744612-744728:-1:exon
so has part: feature:744376-744519:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:765996-766122:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:765835-765903:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:762476-762662:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:759341-759484:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:757120-757205:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:756054-756218:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:748868-748972:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:747127-747364:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:744612-744728:-1:exon

position:744728:-1
position: 744728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:744376-744519:-1:exon

OXA1L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: OXA1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial inner membrane protein OXA1L
translation: MMAAAAPRLGPLICALRVQRCRGPVWGCGASAVRGAATGAGQPPPPTPPEIPEPAEILENSPNLGEPRLEELGLGGSSPVGMIQNLLEFLHMDLGLPWWGAIATGTVGARILLLPLVLRGQREAARLSLHLPQLQRLSQRVAEARRGSDPNQVAVAYSELVSYQRRHDVNPLRGFLVPLVQTPLFVSFFLALQGMAAAPVPGLLRGGLGWFPDLAAPDPFYVLPVLVTASTWLVLELGAETGVSAPGAGPVRQILRLLPLFFLPFILHFPTAVFTYWLTSNSFSLLQTGLLRVPALRAKLGVAPPPLVKATPTSGQATPTPDQATPTLGQATPPGHAPQAKTGILQQLRKEWREAQATHEAERRQWRLRNHLQLAAKGPLRQTFAQNPLNPPKTAPSEPPKRPWKDTLG
SIO_010081: OXA1L
subclass of: SO_0000673
so part of: OXA1L
location: complement(join(744422..744519,744612..744692,747127..747364,748868..748972,756054..756218,757120..757205,759341..759484,762476..762662,765835..765903,765996..766052))
location: region:744422-766052:-1
so has part: feature:765996-766052:-1:exon
so has part: feature:765835-765903:-1:exon
so has part: feature:762476-762662:-1:exon
so has part: feature:759341-759484:-1:exon
so has part: feature:757120-757205:-1:exon
so has part: feature:756054-756218:-1:exon
so has part: feature:748868-748972:-1:exon
so has part: feature:747127-747364:-1:exon
so has part: feature:744612-744692:-1:exon
so has part: feature:744422-744519:-1:exon

XP_041568836.1
type: Protein
SIO_000068: ncbiprotein

position:744422:-1
position: 744422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:766052:-1
position: 766052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:765996-766052:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:765835-765903:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:762476-762662:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:759341-759484:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:757120-757205:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:756054-756218:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:748868-748972:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:747127-747364:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:744612-744692:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:744422-744519:-1:exon

RNF31
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: RNF31
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 766379..814067
location: region:766379-814067:1
so has part: feature:766379-814067:1:exon
subclass of: SO_0000010

121468786
type: Gene
SIO_000068: ncbigene

position:766379:1
position: 766379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:814067:1
position: 814067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:766379-814067:1:exon

RNF31
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: RNF31
product: ring finger protein 31
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_041712901.1
SIO_010081: RNF31
subclass of: SO_0000673
so part of: RNF31
location: join(766379..766583,766674..766721,770202..770354,771905..772063,774731..774885,775332..775385,775689..775731,777537..777637,781488..781859,784094..784366,789874..790047,792565..792795,794687..794860,796570..796668,797823..797912,802436..802541,803865..803983,806412..806525,807649..807706,808845..808941,813773..814067)
location: region:766379-814067:1
so has part: feature:766379-766583:1:exon
so has part: feature:766674-766721:1:exon
so has part: feature:770202-770354:1:exon
so has part: feature:771905-772063:1:exon
so has part: feature:774731-774885:1:exon
so has part: feature:775332-775385:1:exon
so has part: feature:775689-775731:1:exon
so has part: feature:777537-777637:1:exon
so has part: feature:781488-781859:1:exon
so has part: feature:784094-784366:1:exon
so has part: feature:789874-790047:1:exon
so has part: feature:792565-792795:1:exon
so has part: feature:794687-794860:1:exon
so has part: feature:796570-796668:1:exon
so has part: feature:797823-797912:1:exon
so has part: feature:802436-802541:1:exon
so has part: feature:803865-803983:1:exon
so has part: feature:806412-806525:1:exon
so has part: feature:807649-807706:1:exon
so has part: feature:808845-808941:1:exon
so has part: feature:813773-814067:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:766379-766583:1:exon

position:766583:1
position: 766583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:766674-766721:1:exon

position:766674:1
position: 766674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:766721:1
position: 766721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:770202-770354:1:exon

position:770202:1
position: 770202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:770354:1
position: 770354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:771905-772063:1:exon

position:771905:1
position: 771905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:772063:1
position: 772063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:774731-774885:1:exon

position:774731:1
position: 774731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:774885:1
position: 774885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:775332-775385:1:exon

position:775332:1
position: 775332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:775385:1
position: 775385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:775689-775731:1:exon

position:775689:1
position: 775689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:775731:1
position: 775731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:777537-777637:1:exon

position:777537:1
position: 777537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:777637:1
position: 777637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:781488-781859:1:exon

position:781488:1
position: 781488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:781859:1
position: 781859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:784094-784366:1:exon

position:784094:1
position: 784094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:784366:1
position: 784366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:789874-790047:1:exon

position:789874:1
position: 789874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:790047:1
position: 790047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:792565-792795:1:exon

position:792565:1
position: 792565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:792795:1
position: 792795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:794687-794860:1:exon

position:794687:1
position: 794687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:794860:1
position: 794860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:796570-796668:1:exon

position:796570:1
position: 796570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:796668:1
position: 796668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:797823-797912:1:exon

position:797823:1
position: 797823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:797912:1
position: 797912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:802436-802541:1:exon

position:802436:1
position: 802436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:802541:1
position: 802541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:803865-803983:1:exon

position:803865:1
position: 803865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:803983:1
position: 803983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:806412-806525:1:exon

position:806412:1
position: 806412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:806525:1
position: 806525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:807649-807706:1:exon

position:807649:1
position: 807649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:807706:1
position: 807706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:808845-808941:1:exon

position:808845:1
position: 808845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:808941:1
position: 808941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:813773-814067:1:exon

position:813773:1
position: 813773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RNF31
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: RNF31
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RNF31
translation: MADPPKDTTDLGSLQALRAALQGALIRSPAQPEPPELEPLLRLPLPPDRKLRLLPGRKLLRDNLAWNPEGVPHGLEQLRTALNILEKYGRNLLSPRPPRHWRGVRFGNPVFRSTVGAIQGGREVLKLLGYTEESGEGLSFPPPPTGPSXPLVAAVTADVLVLRAELDRLLLNQHPNPHFFTEILLGEDEASLVSDALPQMHTADDEGWTCRSCTLRNPTPAVLCRACERPRLAPSPQPSPAPSQPWPCPRCTFLNRGPAPSCQMCGDVTSAQATPTPGSFPTTSCSENATSCSENSTSGLENPTSGLENLTSGLENLTFGAENLKWGGDDVTSGSGHAPSRDALRQRKLMEDGRRLVELVRVAESQGLPPESLGPAPFSALPEHSDPESQIRHFRGRLGGVLKELQGAEPDPKGGGASLGPFSLAEAAWAWLEGEGQPDRARRVLIGRRKQQLQLLACLSFPERAAALRRNGGGQWEALQELQWRRLRPFRLRHQQGAEPALDFLREDQQALVRQILATLPVASWGRALLVASLGRELGLGLVAAPSSDPLLVELVEAVGSCPDRAALRRRLRCECAVCGWGLPRQLMQWLPGCSCPLCPECFRLHFTVGLRERGVGALGCPSCGRPDLRDDAQRLWYWSTLEPALRRCLDPDTFGLVTRKLTELELLRDPQFLWCPHCSFGFIFEAERGPAQCPQCHQCCCPRCQLPWDPRHSSLSCADFGVWIRSRDPPQGLGAFLGEAGIACPQCGQRFALARGGCLHFQCSQCRHQFCAGCGVPFHRPGTCPSPQCPLGGSLHGHHPRDCLFYLRDWEPARLQQLLQSGNVAFETEPPPEAPPNPTGRCPVPEQKEFGVTLRDEPCGRDTAPGQAGLCRGHYSEYLVSLINRHGLDPAPLYDPEELRAAAQRHLAAGRTQRLPGESEAEHRLRMLRMLGEEVPVRPRPQGAGLRALCK
SIO_010081: RNF31
subclass of: SO_0000673
so part of: RNF31
location: join(766677..766721,770202..770354,771905..772063,774731..774885,775332..775385,775689..775731,777537..777637,781488..781859,784094..784366,789874..790047,792565..792795,794687..794860,796570..796668,797823..797912,802436..802541,803865..803983,806412..806525,807649..807706,808845..808941,813773..814013)
location: region:766677-814013:1
so has part: feature:766677-766721:1:exon
so has part: feature:770202-770354:1:exon
so has part: feature:771905-772063:1:exon
so has part: feature:774731-774885:1:exon
so has part: feature:775332-775385:1:exon
so has part: feature:775689-775731:1:exon
so has part: feature:777537-777637:1:exon
so has part: feature:781488-781859:1:exon
so has part: feature:784094-784366:1:exon
so has part: feature:789874-790047:1:exon
so has part: feature:792565-792795:1:exon
so has part: feature:794687-794860:1:exon
so has part: feature:796570-796668:1:exon
so has part: feature:797823-797912:1:exon
so has part: feature:802436-802541:1:exon
so has part: feature:803865-803983:1:exon
so has part: feature:806412-806525:1:exon
so has part: feature:807649-807706:1:exon
so has part: feature:808845-808941:1:exon
so has part: feature:813773-814013:1:exon

XP_041568835.1
type: Protein
SIO_000068: ncbiprotein

position:766677:1
position: 766677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:814013:1
position: 814013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:766677-766721:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:770202-770354:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:771905-772063:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:774731-774885:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:775332-775385:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:775689-775731:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:777537-777637:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:781488-781859:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:784094-784366:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:789874-790047:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:792565-792795:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:794687-794860:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:796570-796668:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:797823-797912:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:802436-802541:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:803865-803983:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:806412-806525:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:807649-807706:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:808845-808941:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:813773-814013:1:exon

LOC121468792
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121468792
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 829277..846283
location: region:829277-846283:1
so has part: feature:829277-846283:1:exon
subclass of: SO_0000010

121468792
type: Gene
SIO_000068: ncbigene

position:829277:1
position: 829277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:846283:1
position: 846283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:829277-846283:1:exon

LOC121468792
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC121468792
product: meiotic recombination protein REC8 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_041712913.1
SIO_010081: LOC121468792
subclass of: SO_0000673
so part of: LOC121468792
location: join(829277..829412,832054..832099,837557..837590,839735..839812,844844..844950,846178..846283)
location: region:829277-846283:1
so has part: feature:829277-829412:1:exon
so has part: feature:832054-832099:1:exon
so has part: feature:837557-837590:1:exon
so has part: feature:839735-839812:1:exon
so has part: feature:844844-844950:1:exon
so has part: feature:846178-846283:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:829277-829412:1:exon

position:829412:1
position: 829412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:832054-832099:1:exon

position:832054:1
position: 832054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:832099:1
position: 832099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:837557-837590:1:exon

position:837557:1
position: 837557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:837590:1
position: 837590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:839735-839812:1:exon

position:839735:1
position: 839735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:839812:1
position: 839812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:844844-844950:1:exon

position:844844:1
position: 844844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:844950:1
position: 844950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:846178-846283:1:exon

position:846178:1
position: 846178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121468792
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC121468792
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: meiotic recombination protein REC8 homolog
translation: MEEEPSAPPLPAPPPEVLPELPEAPPIIDLRSLILDHARVPEGAELGAILSPDWPRPRVAQTFALCLELCASHWLKLEQAQPYGPIRIKLRPGRQ
SIO_010081: LOC121468792
subclass of: SO_0000673
so part of: LOC121468792
location: join(837574..837590,839735..839812,844844..844950,846178..846263)
location: region:837574-846263:1
so has part: feature:837574-837590:1:exon
so has part: feature:839735-839812:1:exon
so has part: feature:844844-844950:1:exon
so has part: feature:846178-846263:1:exon

XP_041568847.1
type: Protein
SIO_000068: ncbiprotein

position:837574:1
position: 837574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:846263:1
position: 846263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:837574-837590:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:839735-839812:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:844844-844950:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:846178-846263:1:exon

IPO4
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: IPO4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(849966..919488)
location: region:849966-919488:-1
so has part: feature:849966-919488:-1:exon
subclass of: SO_0000010

121468782
type: Gene
SIO_000068: ncbigene

position:849966:-1
position: 849966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:919488:-1
position: 919488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:849966-919488:-1:exon

IPO4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: IPO4
product: importin 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_041712886.1
SIO_010081: IPO4
subclass of: SO_0000673
so part of: IPO4
location: complement(join(849966..850122,853097..853169,856682..856774,858005..858122,862207..862571,863722..863766,864784..864968,869330..869408,869516..869573,870643..870720,870813..870916,872470..872578,875290..875398,876208..876300,879944..880048,881750..881876,884587..884695,885997..886106,889580..889633,892672..892815,895143..895226,898152..898253,904114..904179,908688..908858,913191..913314,914149..914190,914545..914612,919076..919162,919250..919488))
location: region:849966-919488:-1
so has part: feature:919250-919488:-1:exon
so has part: feature:919076-919162:-1:exon
so has part: feature:914545-914612:-1:exon
so has part: feature:914149-914190:-1:exon
so has part: feature:913191-913314:-1:exon
so has part: feature:908688-908858:-1:exon
so has part: feature:904114-904179:-1:exon
so has part: feature:898152-898253:-1:exon
so has part: feature:895143-895226:-1:exon
so has part: feature:892672-892815:-1:exon
so has part: feature:889580-889633:-1:exon
so has part: feature:885997-886106:-1:exon
so has part: feature:884587-884695:-1:exon
so has part: feature:881750-881876:-1:exon
so has part: feature:879944-880048:-1:exon
so has part: feature:876208-876300:-1:exon
so has part: feature:875290-875398:-1:exon
so has part: feature:872470-872578:-1:exon
so has part: feature:870813-870916:-1:exon
so has part: feature:870643-870720:-1:exon
so has part: feature:869516-869573:-1:exon
so has part: feature:869330-869408:-1:exon
so has part: feature:864784-864968:-1:exon
so has part: feature:863722-863766:-1:exon
so has part: feature:862207-862571:-1:exon
so has part: feature:858005-858122:-1:exon
so has part: feature:856682-856774:-1:exon
so has part: feature:853097-853169:-1:exon
so has part: feature:849966-850122:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:919250-919488:-1:exon

position:919250:-1
position: 919250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:919076-919162:-1:exon

position:919076:-1
position: 919076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:919162:-1
position: 919162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:914545-914612:-1:exon

position:914545:-1
position: 914545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:914612:-1
position: 914612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:914149-914190:-1:exon

position:914149:-1
position: 914149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:914190:-1
position: 914190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:913191-913314:-1:exon

position:913191:-1
position: 913191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:913314:-1
position: 913314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:908688-908858:-1:exon

position:908688:-1
position: 908688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:908858:-1
position: 908858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:904114-904179:-1:exon

position:904114:-1
position: 904114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:904179:-1
position: 904179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:898152-898253:-1:exon

position:898152:-1
position: 898152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:898253:-1
position: 898253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:895143-895226:-1:exon

position:895143:-1
position: 895143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:895226:-1
position: 895226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:892672-892815:-1:exon

position:892672:-1
position: 892672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:892815:-1
position: 892815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:889580-889633:-1:exon

position:889580:-1
position: 889580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:889633:-1
position: 889633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:885997-886106:-1:exon

position:885997:-1
position: 885997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:886106:-1
position: 886106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:884587-884695:-1:exon

position:884587:-1
position: 884587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:884695:-1
position: 884695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:881750-881876:-1:exon

position:881750:-1
position: 881750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:881876:-1
position: 881876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:879944-880048:-1:exon

position:879944:-1
position: 879944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:880048:-1
position: 880048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:876208-876300:-1:exon

position:876208:-1
position: 876208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:876300:-1
position: 876300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:875290-875398:-1:exon

position:875290:-1
position: 875290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:875398:-1
position: 875398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:872470-872578:-1:exon

position:872470:-1
position: 872470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:872578:-1
position: 872578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:870813-870916:-1:exon

position:870813:-1
position: 870813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:870916:-1
position: 870916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:870643-870720:-1:exon

position:870643:-1
position: 870643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:870720:-1
position: 870720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:869516-869573:-1:exon

position:869516:-1
position: 869516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:869573:-1
position: 869573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:869330-869408:-1:exon

position:869330:-1
position: 869330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:869408:-1
position: 869408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:864784-864968:-1:exon

position:864784:-1
position: 864784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:864968:-1
position: 864968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:863722-863766:-1:exon

position:863722:-1
position: 863722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:863766:-1
position: 863766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:862207-862571:-1:exon

position:862207:-1
position: 862207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:862571:-1
position: 862571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:858005-858122:-1:exon

position:858005:-1
position: 858005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:858122:-1
position: 858122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:856682-856774:-1:exon

position:856682:-1
position: 856682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:856774:-1
position: 856774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:853097-853169:-1:exon

position:853097:-1
position: 853097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:853169:-1
position: 853169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:849966-850122:-1:exon

position:850122:-1
position: 850122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

IPO4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: IPO4
product: importin 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 53 samples with support for all annotated introns
transcript id: XM_041712885.1
SIO_010081: IPO4
subclass of: SO_0000673
so part of: IPO4
location: complement(join(849966..850122,853097..853166,856679..856774,858005..858122,862207..862571,863722..863766,864784..864968,869330..869408,869516..869573,870643..870720,870813..870916,872470..872578,875290..875398,876208..876300,879944..880048,881750..881876,884587..884695,885997..886106,889580..889633,892672..892815,895143..895226,898152..898253,904114..904179,908688..908858,913191..913314,914149..914190,914545..914612,919076..919162,919250..919366))
location: region:849966-919366:-1
so has part: feature:919250-919366:-1:exon
so has part: feature:919076-919162:-1:exon
so has part: feature:914545-914612:-1:exon
so has part: feature:914149-914190:-1:exon
so has part: feature:913191-913314:-1:exon
so has part: feature:908688-908858:-1:exon
so has part: feature:904114-904179:-1:exon
so has part: feature:898152-898253:-1:exon
so has part: feature:895143-895226:-1:exon
so has part: feature:892672-892815:-1:exon
so has part: feature:889580-889633:-1:exon
so has part: feature:885997-886106:-1:exon
so has part: feature:884587-884695:-1:exon
so has part: feature:881750-881876:-1:exon
so has part: feature:879944-880048:-1:exon
so has part: feature:876208-876300:-1:exon
so has part: feature:875290-875398:-1:exon
so has part: feature:872470-872578:-1:exon
so has part: feature:870813-870916:-1:exon
so has part: feature:870643-870720:-1:exon
so has part: feature:869516-869573:-1:exon
so has part: feature:869330-869408:-1:exon
so has part: feature:864784-864968:-1:exon
so has part: feature:863722-863766:-1:exon
so has part: feature:862207-862571:-1:exon
so has part: feature:858005-858122:-1:exon
so has part: feature:856679-856774:-1:exon
so has part: feature:853097-853166:-1:exon
so has part: feature:849966-850122:-1:exon

position:919366:-1
position: 919366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:919250-919366:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:919076-919162:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:914545-914612:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:914149-914190:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:913191-913314:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:908688-908858:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:904114-904179:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:898152-898253:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:895143-895226:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:892672-892815:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:889580-889633:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:885997-886106:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:884587-884695:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:881750-881876:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:879944-880048:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:876208-876300:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:875290-875398:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:872470-872578:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:870813-870916:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:870643-870720:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:869516-869573:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:869330-869408:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:864784-864968:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:863722-863766:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:862207-862571:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:858005-858122:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:856679-856774:-1:exon

position:856679:-1
position: 856679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:853097-853166:-1:exon

position:853166:-1
position: 853166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:849966-850122:-1:exon

IPO4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: IPO4
product: importin 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_041712887.1
SIO_010081: IPO4
subclass of: SO_0000673
so part of: IPO4
location: complement(join(849966..850122,853097..853166,856679..856774,858005..858122,862207..862571,863722..863766,864784..864968,869330..869408,869516..869573,870643..870720,870813..870916,872470..872578,875290..875398,876208..876300,879944..880048,881750..881876,884587..884695,885997..886106,889580..889633,892672..892815,895143..895226,898152..898253,904114..904179,913191..913314,914149..914190,914545..914612,919076..919162,919250..919363))
location: region:849966-919363:-1
so has part: feature:919250-919363:-1:exon
so has part: feature:919076-919162:-1:exon
so has part: feature:914545-914612:-1:exon
so has part: feature:914149-914190:-1:exon
so has part: feature:913191-913314:-1:exon
so has part: feature:904114-904179:-1:exon
so has part: feature:898152-898253:-1:exon
so has part: feature:895143-895226:-1:exon
so has part: feature:892672-892815:-1:exon
so has part: feature:889580-889633:-1:exon
so has part: feature:885997-886106:-1:exon
so has part: feature:884587-884695:-1:exon
so has part: feature:881750-881876:-1:exon
so has part: feature:879944-880048:-1:exon
so has part: feature:876208-876300:-1:exon
so has part: feature:875290-875398:-1:exon
so has part: feature:872470-872578:-1:exon
so has part: feature:870813-870916:-1:exon
so has part: feature:870643-870720:-1:exon
so has part: feature:869516-869573:-1:exon
so has part: feature:869330-869408:-1:exon
so has part: feature:864784-864968:-1:exon
so has part: feature:863722-863766:-1:exon
so has part: feature:862207-862571:-1:exon
so has part: feature:858005-858122:-1:exon
so has part: feature:856679-856774:-1:exon
so has part: feature:853097-853166:-1:exon
so has part: feature:849966-850122:-1:exon

position:919363:-1
position: 919363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:919250-919363:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:919076-919162:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:914545-914612:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:914149-914190:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:913191-913314:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:904114-904179:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:898152-898253:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:895143-895226:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:892672-892815:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:889580-889633:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:885997-886106:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:884587-884695:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:881750-881876:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:879944-880048:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:876208-876300:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:875290-875398:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:872470-872578:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:870813-870916:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:870643-870720:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:869516-869573:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:869330-869408:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:864784-864968:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:863722-863766:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:862207-862571:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:858005-858122:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:856679-856774:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:853097-853166:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:849966-850122:-1:exon

IPO4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: IPO4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: importin-4 isoform X3
translation: MAASVSPKMAAATLERLLEELLEPDSAKIRQASERLREALMEPDGPEALAEVLRGAERPQIRHLAAVLLRRRLRKFPSELIDRLPHVLVEALERETDSSSRGSLAQLGARLLLLGGLKFWEPVEKWIQEAAKDPQKIEPILRSLLPDVLEALQELLSLDEDRGADALEILDEFLEVNPESVIPHLKPLLELCLQVAGDECRGDGVRVRALATLTFLAQKRPKALLRGGLLPLLLRGLLVPLCAQIRPENPDPEETWGGEGQPCPRHGAAQVLDALAQGLPPEKLLKELLPLLEGPARGGSAGGRKGALLALTALARGCGPALRRRYVGVVLGALRAGLGDPDGAVRGAAAAALRELREELEPEVVPVAAEALPRILGEFWDSPNSPSPDPKSWFVLETLLEALGEGVQPWLPQVLPRISAALEAPAGGELGLSALHALACSCGSLPLPPSIIATVSALARGGEQQLQALEVMAALGPAQVGEGLLEALQVGLGLAESGDSDATRVTLALLAAVSELLGEGTAPLLPRVLPLLQGALRPPPALPPSDAPDWLLGFHDDEEGAEPMEEDDVNEWAEPEQAEVGGAFPGLAEAALGALGELAENCGSALLPHLEPLLAAILDLTQFPQCRVRGAAYEALGSLSCCGRGPQTGPSPPHQGAFRALLEGLRAEPEVGGALGAVGGVGRILQPPGHAPAEWLEPIGRALCDVIAGQIACLRANGDGDDEEETSQRSELRETASDWLPEVGVAMSRVGVAGTGRGVSFPPRLFRRILPSLLAALADPAHPGARSWAGAVIGQLGHALGAEATPFLPDLVPAFRLAAGDADPEVRANAFYAIGRIGEAVGHAHQEGAWPGAELCCHALRGEGPGRVRDNILGALVRQRGAPLPQVLPLVLGALPISEDFEEEEPVLKFLLGAGPDMLLPHLPKFVGAVGPGLALQRLPPELSQSLLALLRQMGGADPRHFREGVASLDPAHAAILGRMLDDVIGGQ
SIO_010081: IPO4
subclass of: SO_0000673
so part of: IPO4
location: complement(join(849980..850122,853097..853166,856679..856774,858005..858122,862207..862571,863722..863766,864784..864968,869330..869408,869516..869573,870643..870720,870813..870916,872470..872578,875290..875398,876208..876300,879944..880048,881750..881876,884587..884695,885997..886106,889580..889633,892672..892815,895143..895226,898152..898253,904114..904179,913191..913314,914149..914190,914545..914612,919076..919162,919250..919342))
location: region:849980-919342:-1
so has part: feature:919250-919342:-1:exon
so has part: feature:919076-919162:-1:exon
so has part: feature:914545-914612:-1:exon
so has part: feature:914149-914190:-1:exon
so has part: feature:913191-913314:-1:exon
so has part: feature:904114-904179:-1:exon
so has part: feature:898152-898253:-1:exon
so has part: feature:895143-895226:-1:exon
so has part: feature:892672-892815:-1:exon
so has part: feature:889580-889633:-1:exon
so has part: feature:885997-886106:-1:exon
so has part: feature:884587-884695:-1:exon
so has part: feature:881750-881876:-1:exon
so has part: feature:879944-880048:-1:exon
so has part: feature:876208-876300:-1:exon
so has part: feature:875290-875398:-1:exon
so has part: feature:872470-872578:-1:exon
so has part: feature:870813-870916:-1:exon
so has part: feature:870643-870720:-1:exon
so has part: feature:869516-869573:-1:exon
so has part: feature:869330-869408:-1:exon
so has part: feature:864784-864968:-1:exon
so has part: feature:863722-863766:-1:exon
so has part: feature:862207-862571:-1:exon
so has part: feature:858005-858122:-1:exon
so has part: feature:856679-856774:-1:exon
so has part: feature:853097-853166:-1:exon
so has part: feature:849980-850122:-1:exon

XP_041568821.1
type: Protein
SIO_000068: ncbiprotein

position:849980:-1
position: 849980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:919342:-1
position: 919342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:919250-919342:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:919076-919162:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:914545-914612:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:914149-914190:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:913191-913314:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:904114-904179:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:898152-898253:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:895143-895226:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:892672-892815:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:889580-889633:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:885997-886106:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:884587-884695:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:881750-881876:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:879944-880048:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:876208-876300:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:875290-875398:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:872470-872578:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:870813-870916:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:870643-870720:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:869516-869573:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:869330-869408:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:864784-864968:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:863722-863766:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:862207-862571:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:858005-858122:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:856679-856774:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:853097-853166:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:849980-850122:-1:exon

IPO4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: IPO4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: importin-4 isoform X2
translation: MAASVSPKMAAATLERLLEELLEPDSAKIRQASERLREALMEPDGPEALAEVLRGAERPQIRHLAAVLLRRRLRKFPSELIDRLPHVLVEALERETDSSSRGSLAQLGARLLLLGGLKFWEPVEKWIQEAAKDPQKIEGALRLVGVAVGVAGPALSGLGPAHLRLCRGGLRARGDPKTLGAALGTLGALLGTLRPPILRSLLPDVLEALQELLSLDEDRGADALEILDEFLEVNPESVIPHLKPLLELCLQVAGDECRGDGVRVRALATLTFLAQKRPKALLRGGLLPLLLRGLLVPLCAQIRPENPDPEETWGGEGQPCPRHGAAQVLDALAQGLPPEKLLKELLPLLEGPARGGSAGGRKGALLALTALARGCGPALRRRYVGVVLGALRAGLGDPDGAVRGAAAAALRELREELEPEVVPVAAEALPRILGEFWDSPNSPSPDPKSWFVLETLLEALGEGVQPWLPQVLPRISAALEAPAGGELGLSALHALACSCGSLPLPPSIIATVSALARGGEQQLQALEVMAALGPAQVGEGLLEALQVGLGLAESGDSDATRVTLALLAAVSELLGEGTAPLLPRVLPLLQGALRPPPALPPSDAPDWLLGFHDDEEGAEPMEEDDVNEWAEPEQAEVGGAFPGLAEAALGALGELAENCGSALLPHLEPLLAAILDLTQFPQCRVRGAAYEALGSLSCCGRGPQTGPSPPHQGAFRALLEGLRAEPEVGGALGAVGGVGRILQPPGHAPAEWLEPIGRALCDVIAGQIACLRANGDGDDEEETSQRSELRETASDWLPEVGVAMSRVGVAGTGRGVSFPPRLFRRILPSLLAALADPAHPGARSWAGAVIGQLGHALGAEATPFLPDLVPAFRLAAGDADPEVRANAFYAIGRIGEAVGHAHQEGAWPGAELCCHALRGEGPGRVRDNILGALVRQRGAPLPQVLPLVLGALPISEDFEEEEPVLKFLLGAGPDQLLPHLPKFVGAVGPGLALQRLPPELSQSLLALLRQMGGADPRHFREGVASLDPAHAAILGRMLDDVIGGQ
SIO_010081: IPO4
subclass of: SO_0000673
so part of: IPO4
location: complement(join(849980..850122,853097..853169,856682..856774,858005..858122,862207..862571,863722..863766,864784..864968,869330..869408,869516..869573,870643..870720,870813..870916,872470..872578,875290..875398,876208..876300,879944..880048,881750..881876,884587..884695,885997..886106,889580..889633,892672..892815,895143..895226,898152..898253,904114..904179,908688..908858,913191..913314,914149..914190,914545..914612,919076..919162,919250..919342))
location: region:849980-919342:-1
so has part: feature:919250-919342:-1:exon
so has part: feature:919076-919162:-1:exon
so has part: feature:914545-914612:-1:exon
so has part: feature:914149-914190:-1:exon
so has part: feature:913191-913314:-1:exon
so has part: feature:908688-908858:-1:exon
so has part: feature:904114-904179:-1:exon
so has part: feature:898152-898253:-1:exon
so has part: feature:895143-895226:-1:exon
so has part: feature:892672-892815:-1:exon
so has part: feature:889580-889633:-1:exon
so has part: feature:885997-886106:-1:exon
so has part: feature:884587-884695:-1:exon
so has part: feature:881750-881876:-1:exon
so has part: feature:879944-880048:-1:exon
so has part: feature:876208-876300:-1:exon
so has part: feature:875290-875398:-1:exon
so has part: feature:872470-872578:-1:exon
so has part: feature:870813-870916:-1:exon
so has part: feature:870643-870720:-1:exon
so has part: feature:869516-869573:-1:exon
so has part: feature:869330-869408:-1:exon
so has part: feature:864784-864968:-1:exon
so has part: feature:863722-863766:-1:exon
so has part: feature:862207-862571:-1:exon
so has part: feature:858005-858122:-1:exon
so has part: feature:856682-856774:-1:exon
so has part: feature:853097-853169:-1:exon
so has part: feature:849980-850122:-1:exon

XP_041568820.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:919250-919342:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:919076-919162:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:914545-914612:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:914149-914190:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:913191-913314:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:908688-908858:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:904114-904179:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:898152-898253:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:895143-895226:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:892672-892815:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:889580-889633:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:885997-886106:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:884587-884695:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:881750-881876:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:879944-880048:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:876208-876300:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:875290-875398:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:872470-872578:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:870813-870916:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:870643-870720:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:869516-869573:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:869330-869408:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:864784-864968:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:863722-863766:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:862207-862571:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:858005-858122:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:856682-856774:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:853097-853169:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:849980-850122:-1:exon

IPO4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: IPO4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: importin-4 isoform X1
translation: MAASVSPKMAAATLERLLEELLEPDSAKIRQASERLREALMEPDGPEALAEVLRGAERPQIRHLAAVLLRRRLRKFPSELIDRLPHVLVEALERETDSSSRGSLAQLGARLLLLGGLKFWEPVEKWIQEAAKDPQKIEGALRLVGVAVGVAGPALSGLGPAHLRLCRGGLRARGDPKTLGAALGTLGALLGTLRPPILRSLLPDVLEALQELLSLDEDRGADALEILDEFLEVNPESVIPHLKPLLELCLQVAGDECRGDGVRVRALATLTFLAQKRPKALLRGGLLPLLLRGLLVPLCAQIRPENPDPEETWGGEGQPCPRHGAAQVLDALAQGLPPEKLLKELLPLLEGPARGGSAGGRKGALLALTALARGCGPALRRRYVGVVLGALRAGLGDPDGAVRGAAAAALRELREELEPEVVPVAAEALPRILGEFWDSPNSPSPDPKSWFVLETLLEALGEGVQPWLPQVLPRISAALEAPAGGELGLSALHALACSCGSLPLPPSIIATVSALARGGEQQLQALEVMAALGPAQVGEGLLEALQVGLGLAESGDSDATRVTLALLAAVSELLGEGTAPLLPRVLPLLQGALRPPPALPPSDAPDWLLGFHDDEEGAEPMEEDDVNEWAEPEQAEVGGAFPGLAEAALGALGELAENCGSALLPHLEPLLAAILDLTQFPQCRVRGAAYEALGSLSCCGRGPQTGPSPPHQGAFRALLEGLRAEPEVGGALGAVGGVGRILQPPGHAPAEWLEPIGRALCDVIAGQIACLRANGDGDDEEETSQRSELRETASDWLPEVGVAMSRVGVAGTGRGVSFPPRLFRRILPSLLAALADPAHPGARSWAGAVIGQLGHALGAEATPFLPDLVPAFRLAAGDADPEVRANAFYAIGRIGEAVGHAHQEGAWPGAELCCHALRGEGPGRVRDNILGALVRQRGAPLPQVLPLVLGALPISEDFEEEEPVLKFLLGAGPDMLLPHLPKFVGAVGPGLALQRLPPELSQSLLALLRQMGGADPRHFREGVASLDPAHAAILGRMLDDVIGGQ
SIO_010081: IPO4
subclass of: SO_0000673
so part of: IPO4
location: complement(join(849980..850122,853097..853166,856679..856774,858005..858122,862207..862571,863722..863766,864784..864968,869330..869408,869516..869573,870643..870720,870813..870916,872470..872578,875290..875398,876208..876300,879944..880048,881750..881876,884587..884695,885997..886106,889580..889633,892672..892815,895143..895226,898152..898253,904114..904179,908688..908858,913191..913314,914149..914190,914545..914612,919076..919162,919250..919342))
location: region:849980-919342:-1
so has part: feature:919250-919342:-1:exon
so has part: feature:919076-919162:-1:exon
so has part: feature:914545-914612:-1:exon
so has part: feature:914149-914190:-1:exon
so has part: feature:913191-913314:-1:exon
so has part: feature:908688-908858:-1:exon
so has part: feature:904114-904179:-1:exon
so has part: feature:898152-898253:-1:exon
so has part: feature:895143-895226:-1:exon
so has part: feature:892672-892815:-1:exon
so has part: feature:889580-889633:-1:exon
so has part: feature:885997-886106:-1:exon
so has part: feature:884587-884695:-1:exon
so has part: feature:881750-881876:-1:exon
so has part: feature:879944-880048:-1:exon
so has part: feature:876208-876300:-1:exon
so has part: feature:875290-875398:-1:exon
so has part: feature:872470-872578:-1:exon
so has part: feature:870813-870916:-1:exon
so has part: feature:870643-870720:-1:exon
so has part: feature:869516-869573:-1:exon
so has part: feature:869330-869408:-1:exon
so has part: feature:864784-864968:-1:exon
so has part: feature:863722-863766:-1:exon
so has part: feature:862207-862571:-1:exon
so has part: feature:858005-858122:-1:exon
so has part: feature:856679-856774:-1:exon
so has part: feature:853097-853166:-1:exon
so has part: feature:849980-850122:-1:exon

XP_041568819.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:919250-919342:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:919076-919162:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:914545-914612:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:914149-914190:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:913191-913314:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:908688-908858:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:904114-904179:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:898152-898253:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:895143-895226:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:892672-892815:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:889580-889633:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:885997-886106:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:884587-884695:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:881750-881876:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:879944-880048:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:876208-876300:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:875290-875398:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:872470-872578:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:870813-870916:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:870643-870720:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:869516-869573:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:869330-869408:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:864784-864968:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:863722-863766:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:862207-862571:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:858005-858122:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:856679-856774:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:853097-853166:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:849980-850122:-1:exon

LOC121468783
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121468783
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(920280..938441)
location: region:920280-938441:-1
so has part: feature:920280-938441:-1:exon
subclass of: SO_0000010

121468783
type: Gene
SIO_000068: ncbigene

position:920280:-1
position: 920280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:938441:-1
position: 938441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:920280-938441:-1:exon

LOC121468783
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC121468783
product: NEDD8, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XM_041712889.1
SIO_010081: LOC121468783
subclass of: SO_0000673
so part of: LOC121468783
location: complement(join(920280..920532,924751..924833,928170..928268,928929..928984,929063..929105,929180..929279,932234..932329,933183..933284,934734..934841,936641..936848,938350..938441))
location: region:920280-938441:-1
so has part: feature:938350-938441:-1:exon
so has part: feature:936641-936848:-1:exon
so has part: feature:934734-934841:-1:exon
so has part: feature:933183-933284:-1:exon
so has part: feature:932234-932329:-1:exon
so has part: feature:929180-929279:-1:exon
so has part: feature:929063-929105:-1:exon
so has part: feature:928929-928984:-1:exon
so has part: feature:928170-928268:-1:exon
so has part: feature:924751-924833:-1:exon
so has part: feature:920280-920532:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:938350-938441:-1:exon

position:938350:-1
position: 938350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:936641-936848:-1:exon

position:936641:-1
position: 936641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:936848:-1
position: 936848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:934734-934841:-1:exon

position:934734:-1
position: 934734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:934841:-1
position: 934841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:933183-933284:-1:exon

position:933183:-1
position: 933183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:933284:-1
position: 933284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:932234-932329:-1:exon

position:932234:-1
position: 932234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:932329:-1
position: 932329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:929180-929279:-1:exon

position:929180:-1
position: 929180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:929279:-1
position: 929279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:929063-929105:-1:exon

position:929063:-1
position: 929063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:929105:-1
position: 929105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:928929-928984:-1:exon

position:928929:-1
position: 928929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:928984:-1
position: 928984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:928170-928268:-1:exon

position:928170:-1
position: 928170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:928268:-1
position: 928268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:924751-924833:-1:exon

position:924751:-1
position: 924751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:924833:-1
position: 924833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:920280-920532:-1:exon

position:920532:-1
position: 920532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121468783
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC121468783
product: NEDD8, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 78 samples with support for all annotated introns
transcript id: XM_041712893.1
SIO_010081: LOC121468783
subclass of: SO_0000673
so part of: LOC121468783
location: complement(join(920280..920532,924751..924833,928221..928268,928929..928984,929063..929105,929180..929279,932234..932329,933183..933284,934734..934841,936641..936848,938350..938439))
location: region:920280-938439:-1
so has part: feature:938350-938439:-1:exon
so has part: feature:936641-936848:-1:exon
so has part: feature:934734-934841:-1:exon
so has part: feature:933183-933284:-1:exon
so has part: feature:932234-932329:-1:exon
so has part: feature:929180-929279:-1:exon
so has part: feature:929063-929105:-1:exon
so has part: feature:928929-928984:-1:exon
so has part: feature:928221-928268:-1:exon
so has part: feature:924751-924833:-1:exon
so has part: feature:920280-920532:-1:exon

position:938439:-1
position: 938439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:938350-938439:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:936641-936848:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:934734-934841:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:933183-933284:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:932234-932329:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:929180-929279:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:929063-929105:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:928929-928984:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:928221-928268:-1:exon

position:928221:-1
position: 928221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:924751-924833:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:920280-920532:-1:exon

LOC121468783
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC121468783
product: NEDD8, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_041712891.1
SIO_010081: LOC121468783
subclass of: SO_0000673
so part of: LOC121468783
location: complement(join(920280..920532,924751..924833,928180..928268,928929..928984,929063..929105,929180..929279,932234..932329,934734..934841,936641..936848,938350..938438))
location: region:920280-938438:-1
so has part: feature:938350-938438:-1:exon
so has part: feature:936641-936848:-1:exon
so has part: feature:934734-934841:-1:exon
so has part: feature:932234-932329:-1:exon
so has part: feature:929180-929279:-1:exon
so has part: feature:929063-929105:-1:exon
so has part: feature:928929-928984:-1:exon
so has part: feature:928180-928268:-1:exon
so has part: feature:924751-924833:-1:exon
so has part: feature:920280-920532:-1:exon

position:938438:-1
position: 938438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:938350-938438:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:936641-936848:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:934734-934841:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:932234-932329:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:929180-929279:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:929063-929105:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:928929-928984:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:928180-928268:-1:exon

position:928180:-1
position: 928180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:924751-924833:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:920280-920532:-1:exon

LOC121468783
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC121468783
product: NEDD8, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_041712890.1
SIO_010081: LOC121468783
subclass of: SO_0000673
so part of: LOC121468783
location: complement(join(920280..920532,924751..924833,928180..928268,928929..928984,929063..929105,929180..929279,933183..933284,934734..934841,936641..936848,938350..938438))
location: region:920280-938438:-1
so has part: feature:938350-938438:-1:exon
so has part: feature:936641-936848:-1:exon
so has part: feature:934734-934841:-1:exon
so has part: feature:933183-933284:-1:exon
so has part: feature:929180-929279:-1:exon
so has part: feature:929063-929105:-1:exon
so has part: feature:928929-928984:-1:exon
so has part: feature:928180-928268:-1:exon
so has part: feature:924751-924833:-1:exon
so has part: feature:920280-920532:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:938350-938438:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:936641-936848:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:934734-934841:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:933183-933284:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:929180-929279:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:929063-929105:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:928929-928984:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:928180-928268:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:924751-924833:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:920280-920532:-1:exon

LOC121468783
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC121468783
product: NEDD8, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
transcript id: XM_041712888.1
SIO_010081: LOC121468783
subclass of: SO_0000673
so part of: LOC121468783
location: complement(join(920280..920532,924751..924833,928180..928268,928929..928984,929063..929105,929180..929279,932234..932329,933183..933284,934734..934841,936641..936848,938350..938438))
location: region:920280-938438:-1
so has part: feature:938350-938438:-1:exon
so has part: feature:936641-936848:-1:exon
so has part: feature:934734-934841:-1:exon
so has part: feature:933183-933284:-1:exon
so has part: feature:932234-932329:-1:exon
so has part: feature:929180-929279:-1:exon
so has part: feature:929063-929105:-1:exon
so has part: feature:928929-928984:-1:exon
so has part: feature:928180-928268:-1:exon
so has part: feature:924751-924833:-1:exon
so has part: feature:920280-920532:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:938350-938438:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:936641-936848:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:934734-934841:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:933183-933284:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:932234-932329:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:929180-929279:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:929063-929105:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:928929-928984:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:928180-928268:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:924751-924833:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:920280-920532:-1:exon

LOC121468783
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC121468783
product: NEDD8, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_041712894.1
SIO_010081: LOC121468783
subclass of: SO_0000673
so part of: LOC121468783
location: complement(join(920280..920532,924751..924833,928180..928268,928929..928984,929063..929105,929180..929279,932234..932329,936641..936848,938350..938437))
location: region:920280-938437:-1
so has part: feature:938350-938437:-1:exon
so has part: feature:936641-936848:-1:exon
so has part: feature:932234-932329:-1:exon
so has part: feature:929180-929279:-1:exon
so has part: feature:929063-929105:-1:exon
so has part: feature:928929-928984:-1:exon
so has part: feature:928180-928268:-1:exon
so has part: feature:924751-924833:-1:exon
so has part: feature:920280-920532:-1:exon

position:938437:-1
position: 938437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:938350-938437:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:936641-936848:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:932234-932329:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:929180-929279:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:929063-929105:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:928929-928984:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:928180-928268:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:924751-924833:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:920280-920532:-1:exon

LOC121468783
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC121468783
product: NEDD8, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_041712892.1
SIO_010081: LOC121468783
subclass of: SO_0000673
so part of: LOC121468783
location: complement(join(920280..920532,924751..924833,928180..928268,928929..928984,929063..929105,929180..929279,932234..932329,933183..933284,936641..936848,938350..938437))
location: region:920280-938437:-1
so has part: feature:938350-938437:-1:exon
so has part: feature:936641-936848:-1:exon
so has part: feature:933183-933284:-1:exon
so has part: feature:932234-932329:-1:exon
so has part: feature:929180-929279:-1:exon
so has part: feature:929063-929105:-1:exon
so has part: feature:928929-928984:-1:exon
so has part: feature:928180-928268:-1:exon
so has part: feature:924751-924833:-1:exon
so has part: feature:920280-920532:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:938350-938437:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:936641-936848:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:933183-933284:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:932234-932329:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:929180-929279:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:929063-929105:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:928929-928984:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:928180-928268:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:924751-924833:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:920280-920532:-1:exon

LOC121468783
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC121468783
product: NEDD8, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 65 samples with support for all annotated introns
transcript id: XM_041712895.1
SIO_010081: LOC121468783
subclass of: SO_0000673
so part of: LOC121468783
location: complement(join(920280..920532,924751..924833,928170..928268,928442..928546))
location: region:920280-928546:-1
so has part: feature:928442-928546:-1:exon
so has part: feature:928170-928268:-1:exon
so has part: feature:924751-924833:-1:exon
so has part: feature:920280-920532:-1:exon

position:928546:-1
position: 928546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:928442-928546:-1:exon

position:928442:-1
position: 928442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:928170-928268:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:924751-924833:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:920280-920532:-1:exon

LOC121468783
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC121468783
product: NEDD8, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 3 long SRA reads, 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 163 samples with support for all annotated introns
transcript id: XM_041712896.1
SIO_010081: LOC121468783
subclass of: SO_0000673
so part of: LOC121468783
location: complement(join(920280..920532,924751..924833,928221..928268,928442..928543))
location: region:920280-928543:-1
so has part: feature:928442-928543:-1:exon
so has part: feature:928221-928268:-1:exon
so has part: feature:924751-924833:-1:exon
so has part: feature:920280-920532:-1:exon

position:928543:-1
position: 928543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:928442-928543:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:928221-928268:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:924751-924833:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:920280-920532:-1:exon

LOC121468783
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC121468783
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC121468783 isoform X7
translation: MGGSDVSPSPSLRLALAGAWWALRGRGLEGRGRGGRGLEGRGWGRVLALLEAVGGGAPALLRPRHRARLSLGLRAQEYGPCFRRSLFRLFLEFLGRVESALPPPDLPQLERLCRSHAPPGSRPRPLSRLQRYFAEVRHAHPAPLPRPLPAEKTPLTRKPRPCRRRLRPLRMAPLDADGERDRDRHRTHGQGERPVWTSTDQYGPVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKIQGGSVLHLVLALRGGVARP
SIO_010081: LOC121468783
subclass of: SO_0000673
so part of: LOC121468783
location: complement(join(920439..920532,924751..924833,928180..928268,928929..928984,929063..929105,929180..929279,932234..932329,936641..936848,938350..938369))
location: region:920439-938369:-1
so has part: feature:938350-938369:-1:exon
so has part: feature:936641-936848:-1:exon
so has part: feature:932234-932329:-1:exon
so has part: feature:929180-929279:-1:exon
so has part: feature:929063-929105:-1:exon
so has part: feature:928929-928984:-1:exon
so has part: feature:928180-928268:-1:exon
so has part: feature:924751-924833:-1:exon
so has part: feature:920439-920532:-1:exon

XP_041568828.1
type: Protein
SIO_000068: ncbiprotein

position:920439:-1
position: 920439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:938369:-1
position: 938369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:938350-938369:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:936641-936848:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:932234-932329:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:929180-929279:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:929063-929105:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:928929-928984:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:928180-928268:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:924751-924833:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:920439-920532:-1:exon

LOC121468783
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC121468783
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC121468783 isoform X5
translation: MGGSDVSPSPSLRLALAGAWWALRGRGLEGRGRGGRGLEGRGWGRVLALLEAVGGGAPALLRPRHRARLSLGLRAQPPQELPLVGVAEEHFREQVLGILGSGRGLEPFLQEYGPCFRRSLFRLFLEFLGRVESALPPPDLPQLERLCRSHAPPGSRPRPLSRLQRYFAEVRHAHPAPLPRPLPAEKTPLTRKPRPCRRRLRPLRMAPLDADGERDRDRHRTHGQGERPVWTSTDQYGPVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKIQGGSVLHLVLALRGGVARP
SIO_010081: LOC121468783
subclass of: SO_0000673
so part of: LOC121468783
location: complement(join(920439..920532,924751..924833,928180..928268,928929..928984,929063..929105,929180..929279,932234..932329,933183..933284,936641..936848,938350..938369))
location: region:920439-938369:-1
so has part: feature:938350-938369:-1:exon
so has part: feature:936641-936848:-1:exon
so has part: feature:933183-933284:-1:exon
so has part: feature:932234-932329:-1:exon
so has part: feature:929180-929279:-1:exon
so has part: feature:929063-929105:-1:exon
so has part: feature:928929-928984:-1:exon
so has part: feature:928180-928268:-1:exon
so has part: feature:924751-924833:-1:exon
so has part: feature:920439-920532:-1:exon

XP_041568826.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:938350-938369:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:936641-936848:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:933183-933284:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:932234-932329:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:929180-929279:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:929063-929105:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:928929-928984:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:928180-928268:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:924751-924833:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:920439-920532:-1:exon

LOC121468783
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC121468783
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC121468783 isoform X4
translation: MGGSDVSPSPSLRLALAGAWWALRGRGLEGRGRGGRGLEGRGWGRVLALLEAVGGGAPALLRPRHRARLSLGLRAQVVTSLLRELGPAPAVLDALDWLFPEGAGPAGGHALGEYGPCFRRSLFRLFLEFLGRVESALPPPDLPQLERLCRSHAPPGSRPRPLSRLQRYFAEVRHAHPAPLPRPLPAEKTPLTRKPRPCRRRLRPLRMAPLDADGERDRDRHRTHGQGERPVWTSTDQYGPVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKIQGGSVLHLVLALRGGVARP
SIO_010081: LOC121468783
subclass of: SO_0000673
so part of: LOC121468783
location: complement(join(920439..920532,924751..924833,928180..928268,928929..928984,929063..929105,929180..929279,932234..932329,934734..934841,936641..936848,938350..938369))
location: region:920439-938369:-1
so has part: feature:938350-938369:-1:exon
so has part: feature:936641-936848:-1:exon
so has part: feature:934734-934841:-1:exon
so has part: feature:932234-932329:-1:exon
so has part: feature:929180-929279:-1:exon
so has part: feature:929063-929105:-1:exon
so has part: feature:928929-928984:-1:exon
so has part: feature:928180-928268:-1:exon
so has part: feature:924751-924833:-1:exon
so has part: feature:920439-920532:-1:exon

XP_041568825.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:938350-938369:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:936641-936848:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:934734-934841:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:932234-932329:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:929180-929279:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:929063-929105:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:928929-928984:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:928180-928268:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:924751-924833:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:920439-920532:-1:exon

LOC121468783
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC121468783
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC121468783 isoform X3
translation: MGGSDVSPSPSLRLALAGAWWALRGRGLEGRGRGGRGLEGRGWGRVLALLEAVGGGAPALLRPRHRARLSLGLRAQVVTSLLRELGPAPAVLDALDWLFPEGAGPAGGHALGPPQELPLVGVAEEHFREQVLGILGSGRGLEPFLQLERLCRSHAPPGSRPRPLSRLQRYFAEVRHAHPAPLPRPLPAEKTPLTRKPRPCRRRLRPLRMAPLDADGERDRDRHRTHGQGERPVWTSTDQYGPVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKIQGGSVLHLVLALRGGVARP
SIO_010081: LOC121468783
subclass of: SO_0000673
so part of: LOC121468783
location: complement(join(920439..920532,924751..924833,928180..928268,928929..928984,929063..929105,929180..929279,933183..933284,934734..934841,936641..936848,938350..938369))
location: region:920439-938369:-1
so has part: feature:938350-938369:-1:exon
so has part: feature:936641-936848:-1:exon
so has part: feature:934734-934841:-1:exon
so has part: feature:933183-933284:-1:exon
so has part: feature:929180-929279:-1:exon
so has part: feature:929063-929105:-1:exon
so has part: feature:928929-928984:-1:exon
so has part: feature:928180-928268:-1:exon
so has part: feature:924751-924833:-1:exon
so has part: feature:920439-920532:-1:exon

XP_041568824.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:938350-938369:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:936641-936848:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:934734-934841:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:933183-933284:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:929180-929279:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:929063-929105:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:928929-928984:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:928180-928268:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:924751-924833:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:920439-920532:-1:exon

LOC121468783
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC121468783
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC121468783 isoform X1
translation: MGGSDVSPSPSLRLALAGAWWALRGRGLEGRGRGGRGLEGRGWGRVLALLEAVGGGAPALLRPRHRARLSLGLRAQVVTSLLRELGPAPAVLDALDWLFPEGAGPAGGHALGPPQELPLVGVAEEHFREQVLGILGSGRGLEPFLQEYGPCFRRSLFRLFLEFLGRVESALPPPDLPQLERLCRSHAPPGSRPRPLSRLQRYFAEVRHAHPAPLPRPLPAEKTPLTRKPRPCRRRLRPLRMAPLDADGERDRDRHRTHGQGERPVWTSTDQYGPVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKIQGGSVLHLVLALRGGVARP
SIO_010081: LOC121468783
subclass of: SO_0000673
so part of: LOC121468783
location: complement(join(920439..920532,924751..924833,928180..928268,928929..928984,929063..929105,929180..929279,932234..932329,933183..933284,934734..934841,936641..936848,938350..938369))
location: region:920439-938369:-1
so has part: feature:938350-938369:-1:exon
so has part: feature:936641-936848:-1:exon
so has part: feature:934734-934841:-1:exon
so has part: feature:933183-933284:-1:exon
so has part: feature:932234-932329:-1:exon
so has part: feature:929180-929279:-1:exon
so has part: feature:929063-929105:-1:exon
so has part: feature:928929-928984:-1:exon
so has part: feature:928180-928268:-1:exon
so has part: feature:924751-924833:-1:exon
so has part: feature:920439-920532:-1:exon

XP_041568822.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:938350-938369:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:936641-936848:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:934734-934841:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:933183-933284:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:932234-932329:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:929180-929279:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:929063-929105:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:928929-928984:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:928180-928268:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:924751-924833:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:920439-920532:-1:exon

LOC121468783
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC121468783
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NEDD8 isoform X9
translation: MLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKIQGGSVLHLVLALRGGVARP
SIO_010081: LOC121468783
subclass of: SO_0000673
so part of: LOC121468783
location: complement(join(920439..920532,924751..924833,928221..928268,928442..928459))
location: region:920439-928459:-1
so has part: feature:928442-928459:-1:exon
so has part: feature:928221-928268:-1:exon
so has part: feature:924751-924833:-1:exon
so has part: feature:920439-920532:-1:exon

XP_041568830.1
type: Protein
SIO_000068: ncbiprotein

position:928459:-1
position: 928459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:928442-928459:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:928221-928268:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:924751-924833:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:920439-920532:-1:exon

LOC121468783
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC121468783
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NEDD8 isoform X8
translation: MLIKVKTLTGKEIEIDIEPTDKVSAQYGPVRTSTDQYGPVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKIQGGSVLHLVLALRGGVARP
SIO_010081: LOC121468783
subclass of: SO_0000673
so part of: LOC121468783
location: complement(join(920439..920532,924751..924833,928170..928268,928442..928459))
location: region:920439-928459:-1
so has part: feature:928442-928459:-1:exon
so has part: feature:928170-928268:-1:exon
so has part: feature:924751-924833:-1:exon
so has part: feature:920439-920532:-1:exon

XP_041568829.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:928442-928459:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:928170-928268:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:924751-924833:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:920439-920532:-1:exon

LOC121468783
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC121468783
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TERF1-interacting nuclear factor 2 isoform X6
translation: MGGSDVSPSPSLRLALAGAWWALRGRGLEGRGRGGRGLEGRGWGRVLALLEAVGGGAPALLRPRHRARLSLGLRAQVVTSLLRELGPAPAVLDALDWLFPEGAGPAGGHALGPPQELPLVGVAEEHFREQVLGILGSGRGLEPFLQEYGPCFRRSLFRLFLEFLGRVESALPPPDLPQLERLCRSHAPPGSRPRPLSRLQRYFAEVRHAHPAPLPRPLPAEKTPLTRKPRPCRRRLRPLRMAPLDADGERDRDRHRTHGQGGADQGARGGEGRDPPAAAAADLQRQADER
SIO_010081: LOC121468783
subclass of: SO_0000673
so part of: LOC121468783
location: complement(join(920524..920532,924751..924833,928221..928268,928929..928984,929063..929105,929180..929279,932234..932329,933183..933284,934734..934841,936641..936848,938350..938369))
location: region:920524-938369:-1
so has part: feature:938350-938369:-1:exon
so has part: feature:936641-936848:-1:exon
so has part: feature:934734-934841:-1:exon
so has part: feature:933183-933284:-1:exon
so has part: feature:932234-932329:-1:exon
so has part: feature:929180-929279:-1:exon
so has part: feature:929063-929105:-1:exon
so has part: feature:928929-928984:-1:exon
so has part: feature:928221-928268:-1:exon
so has part: feature:924751-924833:-1:exon
so has part: feature:920524-920532:-1:exon

XP_041568827.1
type: Protein
SIO_000068: ncbiprotein

position:920524:-1
position: 920524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:938350-938369:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:936641-936848:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:934734-934841:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:933183-933284:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:932234-932329:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:929180-929279:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:929063-929105:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:928929-928984:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:928221-928268:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:924751-924833:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:920524-920532:-1:exon

LOC121468783
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC121468783
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TERF1-interacting nuclear factor 2 isoform X2
translation: MGGSDVSPSPSLRLALAGAWWALRGRGLEGRGRGGRGLEGRGWGRVLALLEAVGGGAPALLRPRHRARLSLGLRAQVVTSLLRELGPAPAVLDALDWLFPEGAGPAGGHALGPPQELPLVGVAEEHFREQVLGILGSGRGLEPFLQEYGPCFRRSLFRLFLEFLGRVESALPPPDLPQLERLCRSHAPPGSRPRPLSRLQRYFAEVRHAHPAPLPRPLPAEKTPLTRKPRPCRRRLRPLRMAPLDADGERDRDRHRTHGQGERPVWTSTDQYGPVWTSGADQGARGGEGRDPPAAAAADLQRQADER
SIO_010081: LOC121468783
subclass of: SO_0000673
so part of: LOC121468783
location: complement(join(920524..920532,924751..924833,928170..928268,928929..928984,929063..929105,929180..929279,932234..932329,933183..933284,934734..934841,936641..936848,938350..938369))
location: region:920524-938369:-1
so has part: feature:938350-938369:-1:exon
so has part: feature:936641-936848:-1:exon
so has part: feature:934734-934841:-1:exon
so has part: feature:933183-933284:-1:exon
so has part: feature:932234-932329:-1:exon
so has part: feature:929180-929279:-1:exon
so has part: feature:929063-929105:-1:exon
so has part: feature:928929-928984:-1:exon
so has part: feature:928170-928268:-1:exon
so has part: feature:924751-924833:-1:exon
so has part: feature:920524-920532:-1:exon

XP_041568823.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:938350-938369:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:936641-936848:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:934734-934841:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:933183-933284:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:932234-932329:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:929180-929279:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:929063-929105:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:928929-928984:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:928170-928268:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:924751-924833:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:920524-920532:-1:exon

TGM1
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: TGM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(940558..998338)
location: region:940558-998338:-1
so has part: feature:940558-998338:-1:exon
subclass of: SO_0000010

121468774
type: Gene
SIO_000068: ncbigene

position:940558:-1
position: 940558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:998338:-1
position: 998338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:940558-998338:-1:exon

TGM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: TGM1
product: transglutaminase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_041712854.1
SIO_010081: TGM1
subclass of: SO_0000673
so part of: TGM1
location: complement(join(940558..940828,945835..945971,949000..949160,950915..951193,957296..957449,959815..959903,960221..960324,961303..961441,964754..964928,968916..969023,975878..975996,980412..980690,986718..986894,994075..994309,998275..998338))
location: region:940558-998338:-1
so has part: feature:998275-998338:-1:exon
so has part: feature:994075-994309:-1:exon
so has part: feature:986718-986894:-1:exon
so has part: feature:980412-980690:-1:exon
so has part: feature:975878-975996:-1:exon
so has part: feature:968916-969023:-1:exon
so has part: feature:964754-964928:-1:exon
so has part: feature:961303-961441:-1:exon
so has part: feature:960221-960324:-1:exon
so has part: feature:959815-959903:-1:exon
so has part: feature:957296-957449:-1:exon
so has part: feature:950915-951193:-1:exon
so has part: feature:949000-949160:-1:exon
so has part: feature:945835-945971:-1:exon
so has part: feature:940558-940828:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:998275-998338:-1:exon

position:998275:-1
position: 998275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:994075-994309:-1:exon

position:994075:-1
position: 994075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:994309:-1
position: 994309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:986718-986894:-1:exon

position:986718:-1
position: 986718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:986894:-1
position: 986894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:980412-980690:-1:exon

position:980412:-1
position: 980412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:980690:-1
position: 980690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:975878-975996:-1:exon

position:975878:-1
position: 975878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:975996:-1
position: 975996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:968916-969023:-1:exon

position:968916:-1
position: 968916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:969023:-1
position: 969023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:964754-964928:-1:exon

position:964754:-1
position: 964754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:964928:-1
position: 964928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:961303-961441:-1:exon

position:961303:-1
position: 961303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:961441:-1
position: 961441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:960221-960324:-1:exon

position:960221:-1
position: 960221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:960324:-1
position: 960324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:959815-959903:-1:exon

position:959815:-1
position: 959815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:959903:-1
position: 959903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:957296-957449:-1:exon

position:957296:-1
position: 957296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:957449:-1
position: 957449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:950915-951193:-1:exon

position:950915:-1
position: 950915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:951193:-1
position: 951193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:949000-949160:-1:exon

position:949000:-1
position: 949000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:949160:-1
position: 949160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:945835-945971:-1:exon

position:945835:-1
position: 945835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:945971:-1
position: 945971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:940558-940828:-1:exon

position:940828:-1
position: 940828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TGM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: TGM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein-glutamine gamma-glutamyltransferase K
translation: MPDPRLDRGRFPSLRLTGAPRAPPPSGRRAGLWRRLAAAGGNCGCCGCCGRSGGGGGEWEPIPGETPGRRTAQPVRPGLLAPVWLRPGSSTNRTAHHTQEFPARPLVVRRGQRFHVGMRLPREPRTGDGICLELTLGPNPQVAKGTHVLVPLGGSSPTGWSAEVDEGVAEPIGGGANSGHALWVGLTAPPTAPIGRYRLSARTRTEAGEFAAPFEPDNDLVLLFNPWCQEDSVYMEQTSDLSEYVLNESGRIFYGTEEQIAERAWNYGQFEPGVLDACLFILDRRGMPHGARGDPVMVARVVSAMVNSLDDSGVLVGNWTGDYSQGTNPSAWAGSVGILRSFHGTGSPVRYGQCWVFAGVVTTVLRCLGLPTRTVTNYNSAHDTDTSLTTDIYLDEAMRPLERLNTDSVWNFHVWNDCWMKRPDLPEGYDGWQVVDATPQETSSGLFCCGPCSVKAVKNGDVFLKYDTPFVFAEVNSDKVYWQRQAHGGFAVVHVEEGAIGRRISTLGATGHARVDITDQYKHPEGSEEERRAVSAATSHGSRPRQRGPTSGGEVTMTVGSGPAVAGADLELRAVLKNGGLEPRTLRLRFSLCAVRYTGVAGAAFRQEQHRRTLPPGQEDTVTMTVTYTEYQPHVGDQDALKLTVAAAVQESGQVLAKELLVRLHTPELTLTLLGPAVVGRPVSVQVVFQNPLPAPLPSASLRMEGAGIACPKPLALGSLGAGQTLRLSQSVTPLRAGQRRLVATLESAALPPLSGCVQFSAQTGSTGSTGSLTGDTGREENHTGSTGNGGRRLRRRRGRPGGSTGG
SIO_010081: TGM1
subclass of: SO_0000673
so part of: TGM1
location: complement(join(940558..940828,945835..945971,949000..949160,950915..951193,957296..957449,959815..959903,960221..960324,961303..961441,964754..964928,968916..969023,975878..975996,980412..980690,986718..986894,994075..994306))
location: region:940558-994306:-1
so has part: feature:994075-994306:-1:exon
so has part: feature:986718-986894:-1:exon
so has part: feature:980412-980690:-1:exon
so has part: feature:975878-975996:-1:exon
so has part: feature:968916-969023:-1:exon
so has part: feature:964754-964928:-1:exon
so has part: feature:961303-961441:-1:exon
so has part: feature:960221-960324:-1:exon
so has part: feature:959815-959903:-1:exon
so has part: feature:957296-957449:-1:exon
so has part: feature:950915-951193:-1:exon
so has part: feature:949000-949160:-1:exon
so has part: feature:945835-945971:-1:exon
so has part: feature:940558-940828:-1:exon

XP_041568788.1
type: Protein
SIO_000068: ncbiprotein

position:994306:-1
position: 994306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:994075-994306:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:986718-986894:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:980412-980690:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:975878-975996:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:968916-969023:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:964754-964928:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:961303-961441:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:960221-960324:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:959815-959903:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:957296-957449:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:950915-951193:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:949000-949160:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:945835-945971:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:940558-940828:-1:exon

RABGGTA
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: RABGGTA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1000646..1020374)
location: region:1000646-1020374:-1
so has part: feature:1000646-1020374:-1:exon
subclass of: SO_0000010

121468791
type: Gene
SIO_000068: ncbigene

position:1000646:-1
position: 1000646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1020374:-1
position: 1020374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1000646-1020374:-1:exon

RABGGTA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: RABGGTA
product: Rab geranylgeranyltransferase subunit alpha, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_041712908.1
SIO_010081: RABGGTA
subclass of: SO_0000673
so part of: RABGGTA
location: complement(join(1000646..1000908,1003364..1003477,1004611..1004715,1004817..1004905,1014961..1015049,1015133..1015184,1015265..1015358,1015457..1015558,1018275..1018357,1018460..1018543,1020030..1020374))
location: region:1000646-1020374:-1
so has part: feature:1020030-1020374:-1:exon
so has part: feature:1018460-1018543:-1:exon
so has part: feature:1018275-1018357:-1:exon
so has part: feature:1015457-1015558:-1:exon
so has part: feature:1015265-1015358:-1:exon
so has part: feature:1015133-1015184:-1:exon
so has part: feature:1014961-1015049:-1:exon
so has part: feature:1004817-1004905:-1:exon
so has part: feature:1004611-1004715:-1:exon
so has part: feature:1003364-1003477:-1:exon
so has part: feature:1000646-1000908:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1020030-1020374:-1:exon

position:1020030:-1
position: 1020030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1018460-1018543:-1:exon

position:1018460:-1
position: 1018460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1018543:-1
position: 1018543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1018275-1018357:-1:exon

position:1018275:-1
position: 1018275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1018357:-1
position: 1018357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1015457-1015558:-1:exon

position:1015457:-1
position: 1015457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1015558:-1
position: 1015558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1015265-1015358:-1:exon

position:1015265:-1
position: 1015265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1015358:-1
position: 1015358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1015133-1015184:-1:exon

position:1015133:-1
position: 1015133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1015184:-1
position: 1015184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1014961-1015049:-1:exon

position:1014961:-1
position: 1014961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1015049:-1
position: 1015049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1004817-1004905:-1:exon

position:1004817:-1
position: 1004817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1004905:-1
position: 1004905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1004611-1004715:-1:exon

position:1004611:-1
position: 1004611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1004715:-1
position: 1004715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1003364-1003477:-1:exon

position:1003364:-1
position: 1003364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1003477:-1
position: 1003477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1000646-1000908:-1:exon

position:1000908:-1
position: 1000908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RABGGTA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: RABGGTA
product: Rab geranylgeranyltransferase subunit alpha, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 113 samples with support for all annotated introns
transcript id: XM_041712909.1
SIO_010081: RABGGTA
subclass of: SO_0000673
so part of: RABGGTA
location: complement(join(1000646..1000908,1001904..1001991,1003364..1003477,1004611..1004715,1004817..1004905,1014961..1015049,1015133..1015184,1015265..1015358,1015457..1015558,1018275..1018357,1018460..1018543,1020030..1020370))
location: region:1000646-1020370:-1
so has part: feature:1020030-1020370:-1:exon
so has part: feature:1018460-1018543:-1:exon
so has part: feature:1018275-1018357:-1:exon
so has part: feature:1015457-1015558:-1:exon
so has part: feature:1015265-1015358:-1:exon
so has part: feature:1015133-1015184:-1:exon
so has part: feature:1014961-1015049:-1:exon
so has part: feature:1004817-1004905:-1:exon
so has part: feature:1004611-1004715:-1:exon
so has part: feature:1003364-1003477:-1:exon
so has part: feature:1001904-1001991:-1:exon
so has part: feature:1000646-1000908:-1:exon

position:1020370:-1
position: 1020370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1020030-1020370:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1018460-1018543:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1018275-1018357:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1015457-1015558:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1015265-1015358:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1015133-1015184:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1014961-1015049:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1004817-1004905:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1004611-1004715:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1003364-1003477:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1001904-1001991:-1:exon

position:1001904:-1
position: 1001904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1001991:-1
position: 1001991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1000646-1000908:-1:exon

RABGGTA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: RABGGTA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: geranylgeranyl transferase type-2 subunit alpha isoform X1
translation: MPPQPSGAWSSSQSLLVYTGGLPVHAWEHRRALVAGQDPEAELAFAGALLSRDFSNFSAWHHRLRLLAPARGGGEGKPGALPPEKLKEELELVQNAVFTDPTDQSAWVYLRCILSRAPPPPRVICVHVDREDATLAVIFSRPVKVNPTCPELKVTMDGSALAGPWRSGEGRPRPGHTWLCALPAPPTDSPAHLEVTWAGSAPRQVTLLPGEAEAWWQEPIVERELFWPELGVAEAQVLQEQVQVCRELLELEPQSRGCLLTLALLLAALDPRGGAREIRDHLESLRAADPLRSGFVADVQSRFEAALAVLGAGEGLSLANKGLRSVPFLERMAAVSRLELVGNELRELPAALGALRSLRPLATPPLSPHWLPGPALPCWDWLRPRWAPPPAAPPTWPSSSPVSTSLSADWLLLEATPLCRGGHAPFAVRRGNFRVWSSIK
SIO_010081: RABGGTA
subclass of: SO_0000673
so part of: RABGGTA
location: complement(join(1000663..1000908,1003364..1003477,1004611..1004715,1004817..1004905,1014961..1015049,1015133..1015184,1015265..1015358,1015457..1015558,1018275..1018357,1018460..1018543,1020030..1020294))
location: region:1000663-1020294:-1
so has part: feature:1020030-1020294:-1:exon
so has part: feature:1018460-1018543:-1:exon
so has part: feature:1018275-1018357:-1:exon
so has part: feature:1015457-1015558:-1:exon
so has part: feature:1015265-1015358:-1:exon
so has part: feature:1015133-1015184:-1:exon
so has part: feature:1014961-1015049:-1:exon
so has part: feature:1004817-1004905:-1:exon
so has part: feature:1004611-1004715:-1:exon
so has part: feature:1003364-1003477:-1:exon
so has part: feature:1000663-1000908:-1:exon

XP_041568842.1
type: Protein
SIO_000068: ncbiprotein

position:1000663:-1
position: 1000663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1020294:-1
position: 1020294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1020030-1020294:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1018460-1018543:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1018275-1018357:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1015457-1015558:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1015265-1015358:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1015133-1015184:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1014961-1015049:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1004817-1004905:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1004611-1004715:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1003364-1003477:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1000663-1000908:-1:exon

RABGGTA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: RABGGTA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: geranylgeranyl transferase type-2 subunit alpha isoform X2
translation: MPPQPSGAWSSSQSLLVYTGGLPVHAWEHRRALVAGQDPEAELAFAGALLSRDFSNFSAWHHRLRLLAPARGGGEGKPGALPPEKLKEELELVQNAVFTDPTDQSAWVYLRCILSRAPPPPRVICVHVDREDATLAVIFSRPVKVNPTCPELKVTMDGSALAGPWRSGEGRPRPGHTWLCALPAPPTDSPAHLEVTWAGSAPRQVTLLPGEAEAWWQEPIVERELFWPELGVAEAQVLQEQVQVCRELLELEPQSRGCLLTLALLLAALDPRGGAREIRDHLESLRAADPLRSGFVADVQSRFEAALAVLGAGEGLSLANKGLRSVPFLERMAAVSRLELVGNELRELPAALGALRSLRELDLSDNHVTEVGVAPPLPRLRLLRLDRNPIGHASALAPLAAWPRLALLGLAETPLGSAPGGPAHLAELLPGVDVTFS
SIO_010081: RABGGTA
subclass of: SO_0000673
so part of: RABGGTA
location: complement(join(1000760..1000908,1001904..1001991,1003364..1003477,1004611..1004715,1004817..1004905,1014961..1015049,1015133..1015184,1015265..1015358,1015457..1015558,1018275..1018357,1018460..1018543,1020030..1020294))
location: region:1000760-1020294:-1
so has part: feature:1020030-1020294:-1:exon
so has part: feature:1018460-1018543:-1:exon
so has part: feature:1018275-1018357:-1:exon
so has part: feature:1015457-1015558:-1:exon
so has part: feature:1015265-1015358:-1:exon
so has part: feature:1015133-1015184:-1:exon
so has part: feature:1014961-1015049:-1:exon
so has part: feature:1004817-1004905:-1:exon
so has part: feature:1004611-1004715:-1:exon
so has part: feature:1003364-1003477:-1:exon
so has part: feature:1001904-1001991:-1:exon
so has part: feature:1000760-1000908:-1:exon

XP_041568843.1
type: Protein
SIO_000068: ncbiprotein

position:1000760:-1
position: 1000760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1020030-1020294:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1018460-1018543:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1018275-1018357:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1015457-1015558:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1015265-1015358:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1015133-1015184:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1014961-1015049:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1004817-1004905:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1004611-1004715:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1003364-1003477:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1001904-1001991:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1000760-1000908:-1:exon