Taeniopygia guttata isolate Blue55 chromosome 33, bTaeGut1.4.pri, whole genome shotgun sequence.
type: Entry
definition: Taeniopygia guttata isolate Blue55 chromosome 33, bTaeGut1.4.pri, whole genome shotgun sequence.
sequence version: NC_054765.1
sequence date: 2021-05-26
sequence: sequence
division: CON
label: NC_054765.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA558048
dblink: SAMN02981239
keyword: WGS
keyword: RefSeq
source: Taeniopygia guttata (zebra finch)
organism: Taeniopygia guttata
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Taeniopygia.
reference: 1
references: 33911273
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM025862.2.\nAssembly name: bTaeGut1.4.pri\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2021/05/04. The original whole-genome shotgun project has the\naccession RRCB00000000.2.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 09-APR-2021\nAssembly Method :: FALCON v. 5.1.1; FALCON unzip v.\n Nov2017(uc4); Purge_dups v. 1.0.1;\n Scaff10X v. 4.1.0; Bionano Solve\n BspQI/BssSI v. 3.4; Salsa2 v. 2.2.; Arrow\n polishing v. variantCaller 2.3.3; Merfin\n filtering v. 0.1; longranger align v.\n 2.2.2; freebayes polishing v. 1.3.1;\n gEVAL manual curation v. 2021-04-09; VGP\n pipeline v. 1.7\nAssembly Name :: bTaeGut1.4.pri\nDiploid :: Principal Pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 88.2x\nSequencing Technology :: PacBio RSII; 10X Genomics linked reads;\n Bionano Genomics two enzymes; Arima\n Genomics Hi-C\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Taeniopygia guttata Annotation\n Release 106\nAnnotation Version :: 106\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.6\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 1248372
topology: linear
so has quality: SO_0000987
location: 1..1248372
location: region:1-1248372:1
RO_0002162: 59729

NC_054765
type: RefSeq
SIO_000068: refseq

PRJNA558048
type: BioProject
SIO_000068: bioproject

SAMN02981239
type: BioSample
SIO_000068: biosample

1
title: Towards complete and error-free genome assemblies of all vertebrate species
author: Rhie, A.
author: McCarthy, S.A.
author: Fedrigo, O.
author: Damas, J.
author: Formenti, G.
author: Koren, S.
author: Uliano-Silva, M.
author: Chow, W.
author: Fungtammasan, A.
author: Kim, J.
author: Lee, C.
author: Ko, B.J.
author: Chaisson, M.
author: Gedman, G.L.
author: Cantin, L.J.
author: Thibaud-Nissen, F.
author: Haggerty, L.
author: Bista, I.
author: Smith, M.
author: Haase, B.
author: Mountcastle, J.
author: Winkler, S.
author: Paez, S.
author: Howard, J.
author: Vernes, S.C.
author: Lama, T.M.
author: Grutzner, F.
author: Warren, W.C.
author: Balakrishnan, C.N.
author: Burt, D.
author: George, J.M.
author: Biegler, M.T.
author: Iorns, D.
author: Digby, A.
author: Eason, D.
author: Robertson, B.
author: Edwards, T.
author: Wilkinson, M.
author: Turner, G.
author: Meyer, A.
author: Kautt, A.F.
author: Franchini, P.
author: Detrich, H.W. 3rd
author: Svardal, H.
author: Wagner, M.
author: Naylor, G.J.P.
author: Pippel, M.
author: Malinsky, M.
author: Mooney, M.
author: Simbirsky, M.
author: Hannigan, B.T.
author: Pesout, T.
author: Houck, M.
author: Misuraca, A.
author: Kingan, S.B.
author: Hall, R.
author: Kronenberg, Z.
author: Sovic, I.
author: Dunn, C.
author: Ning, Z.
author: Hastie, A.
author: Lee, J.
author: Selvaraj, S.
author: Green, R.E.
author: Putnam, N.H.
author: Gut, I.
author: Ghurye, J.
author: Garrison, E.
author: Sims, Y.
author: Collins, J.
author: Pelan, S.
author: Torrance, J.
author: Tracey, A.
author: Wood, J.
author: Dagnew, R.E.
author: Guan, D.
author: London, S.E.
author: Clayton, D.F.

33911273
type: PubMed
SIO_000068: pubmed

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1248372:1
position: 1248372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-1248372:1:source
so part of: sequence
organism: Taeniopygia guttata
mol type: genomic DNA
isolate: Blue55
chromosome: 33
sex: female
tissue type: Muscle, blood, brain
dev stage: adult
country: USA
lat lon: 36.0014 N 78.9382 W
collected by: Matt Biegler, Duke University and Rockefeller University

59729
type: Taxonomy
SIO_000068: taxonomy

LOC121468620
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121468620
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 13..34316
location: region:13-34316:1
so has part: feature:13-34316:1:exon
subclass of: SO_0000010

121468620
type: Gene
SIO_000068: ncbigene

position:13:1
position: 13
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34316:1
position: 34316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13-34316:1:exon

LOC121468620
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC121468620
product: uncharacterized LOC121468620
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 52% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041712444.1
SIO_010081: LOC121468620
subclass of: SO_0000673
so part of: LOC121468620
location: join(13..138,2566..2776,9004..9218,11657..11921,12708..12870,14984..15176,21349..21519,22464..22594,24574..24691,27059..30370,31994..32117,34273..34316)
location: region:13-34316:1
so has part: feature:13-138:1:exon
so has part: feature:2566-2776:1:exon
so has part: feature:9004-9218:1:exon
so has part: feature:11657-11921:1:exon
so has part: feature:12708-12870:1:exon
so has part: feature:14984-15176:1:exon
so has part: feature:21349-21519:1:exon
so has part: feature:22464-22594:1:exon
so has part: feature:24574-24691:1:exon
so has part: feature:27059-30370:1:exon
so has part: feature:31994-32117:1:exon
so has part: feature:34273-34316:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13-138:1:exon

position:138:1
position: 138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2566-2776:1:exon

position:2566:1
position: 2566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2776:1
position: 2776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9004-9218:1:exon

position:9004:1
position: 9004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9218:1
position: 9218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:11657-11921:1:exon

position:11657:1
position: 11657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11921:1
position: 11921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:12708-12870:1:exon

position:12708:1
position: 12708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12870:1
position: 12870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:14984-15176:1:exon

position:14984:1
position: 14984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15176:1
position: 15176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:21349-21519:1:exon

position:21349:1
position: 21349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21519:1
position: 21519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:22464-22594:1:exon

position:22464:1
position: 22464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22594:1
position: 22594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:24574-24691:1:exon

position:24574:1
position: 24574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24691:1
position: 24691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:27059-30370:1:exon

position:27059:1
position: 27059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30370:1
position: 30370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:31994-32117:1:exon

position:31994:1
position: 31994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32117:1
position: 32117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:34273-34316:1:exon

position:34273:1
position: 34273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121468620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC121468620
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC121468620
translation: MTPRLGCSPIPAPCAPSPRDPHECRRLRSCSECLAQHPLGGAGPPACKWCTNCPEGACIGAGSSCRRENDCRINQREIFAPQNCSEAACGAPDCPRCAGAGRCMWTRQFKRTGETRRILSVQPAYEWTCFSHSLLNVSPMPVESAPPLPCPRPCHLQRTCAACLASAGADGGWQHCLWSLALRQCLSPSFAPLLCLAGGCGRLLRGGGGGGGLPSPPGGLPSPPERCPSPPECGGASQCSQCLRRPRCGWCARGGHSGAGRCIQGGISGPLKGASETCGPGEVWAFLSCPPEDECENGHHTCGPSQVCRDLPDGFTCACRDGYSPDSRTGECRPVCRQGCANGTCVEPDRCRCHFGFVGSDCGVTCACNGHSDCAGPHATDTCLQCHNNTQGPQCQRCRPLFVGTALGGGTCLTCRSFCRHRADVCLSRADLERHRRQPDRYPLEPHLIHTWVQEGPSEAQAVCVNCQNNSVGDRCDTCRAGFFLLDGTCTRCQCNGHADTCNELDGTGCPCQNNTESGACPERRDCHRHQCSKCRDSFQGHPVGGQQCYRLLAVEQEYCLDAASQSHCFPPPQRRPLPPGRSVPFAVQPKFTNVDIRLTLDVTFGVVDLYVATSYDTFAVDVEPDTGWHRVRVQAPGGGGGTFGGQVGGGGTFGTLGGQGGGGGTFGTLGGQGGGGGTFGTLGGQGGGGGTFGTFGTSGGQGGGGGGGGTFGTSGTGGGTFGTLGGQGGQGGQGGGGGTFGGGGGTFGTSGTGGGTFGTLGGQGGQGGGGGTFGGGGGTFGTLGGQGGGGGGGGGGGTFGGGGGTFGTSGTGGGTFGTFGGPGGTGTNGGGTFGTSGTGGGTFGTFGGQGGGGGTFGGGGGTFGTFGGQGGQGGGGGGTFGTSGTGGGTFGTFGGQGGGGGGGGGGTFGTGGGTFGTSGTGGGTFGTSGGTLRSFGAGAGTFGAGGTGGGTFGTSGTGGGTFGTFGGPGGTGTAAGDGGTFGTGGGTFGTSGNGGGTFGTFGGPGGTGTAAGDGGTFRTSGTGGGTFGTFGGPGDTFGTSWTGDGGGGGGTFGTFGGPGGDAFGTSWTGGTGGTGGTGDGGGGTFGTFGGTFGTFGGPGGPAAGGAGPTGPTGFTGDPQSSGDPRPHFGGPQPHFGGQTGFYGQSDDPRPHFGGPRPNFGGPQPHFGGPREEFGGQTSFNDQSDDPKPNFGGPQPHFDDPQPHFDDPKPHFGGPQPNFGGPQPHFGGPRPNFGGPQPNFGGPQPHFGVPQPHFGGQTGFYGQSDDPRPNFGGQTGFADQSDDPKPNFGDPQPNFDDPEPHFGGPKPHFGGPKPHFGGPQPHFDGSPDHPTAPIPNSGTPHPHPTTPPPPTSPPSPPTPPVVAPALLEERAHGLVTYLTVARPVPALVVRGVRDRLVLTYPHAGHALKSTRFYLLVVAGAEPCQGLLFFRQDQAHIDLFVFFSVFFSCFFLFLALCVLLWKAKQGLDARHERRRHRQEMSKMAARPFARVTVCFQYLGYRSFSVGHQQNHPVGHQNHLVGHQSSSMGHQNHLVGHQDHPVGHQNHPVGHQSSMGYQNHPVGHQNHPVGHQSCSVGHQNHPVGHNHPVGYQNHPVGHQNHLMGHQNHPVGHQDHPVGHQSCSVGHQNLPVGHENHPPGPPKPPRGAPGGGPGAAPVTLEPTEDGLAAVATLLLQLPGGDVMGGVMTSQTTR
SIO_010081: LOC121468620
subclass of: SO_0000673
so part of: LOC121468620
location: join(13..138,2566..2776,9004..9218,11657..11921,12708..12870,14984..15176,21349..21519,22464..22594,24574..24691,27059..30370,31994..32117,34273..34316)
location: region:13-34316:1
so has part: feature:13-138:1:exon
so has part: feature:2566-2776:1:exon
so has part: feature:9004-9218:1:exon
so has part: feature:11657-11921:1:exon
so has part: feature:12708-12870:1:exon
so has part: feature:14984-15176:1:exon
so has part: feature:21349-21519:1:exon
so has part: feature:22464-22594:1:exon
so has part: feature:24574-24691:1:exon
so has part: feature:27059-30370:1:exon
so has part: feature:31994-32117:1:exon
so has part: feature:34273-34316:1:exon

XP_041568378.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13-138:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2566-2776:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9004-9218:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11657-11921:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:12708-12870:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:14984-15176:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:21349-21519:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:22464-22594:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:24574-24691:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:27059-30370:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:31994-32117:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:34273-34316:1:exon

LOC121468616
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121468616
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 36844..38717
location: region:36844-38717:1
so has part: feature:36844-38717:1:exon
subclass of: SO_0000011

121468616
type: Gene
SIO_000068: ncbigene

position:36844:1
position: 36844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38717:1
position: 38717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36844-38717:1:exon

LOC121468616
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC121468616
product: uncharacterized LOC121468616
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 46 samples with support for all annotated introns
transcript id: XR_005978503.1
SIO_010081: LOC121468616
subclass of: SO_0000673
so part of: LOC121468616
location: join(36844..37003,38596..38717)
location: region:36844-38717:1
so has part: feature:36844-37003:1:exon
so has part: feature:38596-38717:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:36844-37003:1:exon

position:37003:1
position: 37003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:38596-38717:1:exon

position:38596:1
position: 38596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

USF2
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: USF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(50471..65040)
location: region:50471-65040:-1
so has part: feature:50471-65040:-1:exon
subclass of: SO_0000010

121468611
type: Gene
SIO_000068: ncbigene

position:50471:-1
position: 50471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:65040:-1
position: 65040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50471-65040:-1:exon

USF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: USF2
product: upstream transcription factor 2, c-fos interacting
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 123 samples with support for all annotated introns
transcript id: XM_041712437.1
SIO_010081: USF2
subclass of: SO_0000673
so part of: USF2
location: complement(join(50471..50661,52391..52519,55233..55327,56283..56341,57601..57694,58695..58818,59837..59932,62227..62342,63548..63594,64892..65040))
location: region:50471-65040:-1
so has part: feature:64892-65040:-1:exon
so has part: feature:63548-63594:-1:exon
so has part: feature:62227-62342:-1:exon
so has part: feature:59837-59932:-1:exon
so has part: feature:58695-58818:-1:exon
so has part: feature:57601-57694:-1:exon
so has part: feature:56283-56341:-1:exon
so has part: feature:55233-55327:-1:exon
so has part: feature:52391-52519:-1:exon
so has part: feature:50471-50661:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:64892-65040:-1:exon

position:64892:-1
position: 64892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:63548-63594:-1:exon

position:63548:-1
position: 63548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:63594:-1
position: 63594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:62227-62342:-1:exon

position:62227:-1
position: 62227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:62342:-1
position: 62342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:59837-59932:-1:exon

position:59837:-1
position: 59837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:59932:-1
position: 59932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:58695-58818:-1:exon

position:58695:-1
position: 58695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:58818:-1
position: 58818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:57601-57694:-1:exon

position:57601:-1
position: 57601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57694:-1
position: 57694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:56283-56341:-1:exon

position:56283:-1
position: 56283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:56341:-1
position: 56341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:55233-55327:-1:exon

position:55233:-1
position: 55233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:55327:-1
position: 55327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:52391-52519:-1:exon

position:52391:-1
position: 52391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:52519:-1
position: 52519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:50471-50661:-1:exon

position:50661:-1
position: 50661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

USF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: USF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: upstream stimulatory factor 2
translation: MDMLDPGLDSAAASAAPSQEKPQEAEEGAELQEGEAPPAEGAVAVAAVPGPPGGFAEGGLQYQFRSESNGGQVTYRVVQVTEAPLDAPEAAAVGVVSSFAGTPQVLQNPFSNGGSPGEGGAEARLTWGGEGAVAVQADPALAQAGGQFYVMMAPQEVLQAGGGAPRGLAPHGHAYSPKLEGPRVPRDERRRAQHNEVERRRRDKINNWIVQLSKIIPDCGADSGKSGASKGGILSKACDYVRELRQSNQRLQETFKEAERLQMDNDLLRQQVEELKNENAVLRAQLQQRGLDGTPEGTPQ
SIO_010081: USF2
subclass of: SO_0000673
so part of: USF2
location: complement(join(50572..50661,52391..52519,55233..55327,56283..56341,57601..57694,58695..58818,59837..59932,62227..62342,63548..63594,64892..64944))
location: region:50572-64944:-1
so has part: feature:64892-64944:-1:exon
so has part: feature:63548-63594:-1:exon
so has part: feature:62227-62342:-1:exon
so has part: feature:59837-59932:-1:exon
so has part: feature:58695-58818:-1:exon
so has part: feature:57601-57694:-1:exon
so has part: feature:56283-56341:-1:exon
so has part: feature:55233-55327:-1:exon
so has part: feature:52391-52519:-1:exon
so has part: feature:50572-50661:-1:exon

XP_041568371.1
type: Protein
SIO_000068: ncbiprotein

position:50572:-1
position: 50572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64944:-1
position: 64944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64892-64944:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:63548-63594:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:62227-62342:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:59837-59932:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:58695-58818:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:57601-57694:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:56283-56341:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:55233-55327:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:52391-52519:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:50572-50661:-1:exon

LOC121468603
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121468603
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 68769..69130
location: region:68769-69130:1
so has part: feature:68769-69130:1:exon
subclass of: SO_0000011

121468603
type: Gene
SIO_000068: ncbigene

position:68769:1
position: 68769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:69130:1
position: 69130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:68769-69130:1:exon

LOC121468603
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC121468603
product: uncharacterized LOC121468603, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_005978498.1
SIO_010081: LOC121468603
subclass of: SO_0000673
so part of: LOC121468603
location: join(68769..68817,68905..68919,69059..69130)
location: region:68769-69130:1
so has part: feature:68769-68817:1:exon
so has part: feature:68905-68919:1:exon
so has part: feature:69059-69130:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:68769-68817:1:exon

position:68817:1
position: 68817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:68905-68919:1:exon

position:68905:1
position: 68905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:68919:1
position: 68919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:69059-69130:1:exon

position:69059:1
position: 69059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121468603
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC121468603
product: uncharacterized LOC121468603, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XR_005978499.1
SIO_010081: LOC121468603
subclass of: SO_0000673
so part of: LOC121468603
location: join(68769..68813,69059..69130)
location: region:68769-69130:1
so has part: feature:68769-68813:1:exon
so has part: feature:69059-69130:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:68769-68813:1:exon

position:68813:1
position: 68813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:69059-69130:1:exon

LOC121468601
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121468601
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(69069..94464)
location: region:69069-94464:-1
so has part: feature:69069-94464:-1:exon
subclass of: SO_0000010

121468601
type: Gene
SIO_000068: ncbigene

position:69069:-1
position: 69069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:94464:-1
position: 94464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69069-94464:-1:exon

LOC121468601
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC121468601
product: Schwann cell myelin protein-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_041712424.1
SIO_010081: LOC121468601
subclass of: SO_0000673
so part of: LOC121468601
location: complement(join(69069..69219,69395..69470,70730..70826,72685..72975,75953..76213,79254..79514,81285..81581,86260..86631,90906..90952,94417..94464))
location: region:69069-94464:-1
so has part: feature:94417-94464:-1:exon
so has part: feature:90906-90952:-1:exon
so has part: feature:86260-86631:-1:exon
so has part: feature:81285-81581:-1:exon
so has part: feature:79254-79514:-1:exon
so has part: feature:75953-76213:-1:exon
so has part: feature:72685-72975:-1:exon
so has part: feature:70730-70826:-1:exon
so has part: feature:69395-69470:-1:exon
so has part: feature:69069-69219:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:94417-94464:-1:exon

position:94417:-1
position: 94417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:90906-90952:-1:exon

position:90906:-1
position: 90906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:90952:-1
position: 90952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:86260-86631:-1:exon

position:86260:-1
position: 86260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:86631:-1
position: 86631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:81285-81581:-1:exon

position:81285:-1
position: 81285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:81581:-1
position: 81581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:79254-79514:-1:exon

position:79254:-1
position: 79254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:79514:-1
position: 79514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:75953-76213:-1:exon

position:75953:-1
position: 75953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:76213:-1
position: 76213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:72685-72975:-1:exon

position:72685:-1
position: 72685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:72975:-1
position: 72975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:70730-70826:-1:exon

position:70730:-1
position: 70730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:70826:-1
position: 70826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:69395-69470:-1:exon

position:69395:-1
position: 69395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:69470:-1
position: 69470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:69069-69219:-1:exon

position:69219:-1
position: 69219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121468601
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC121468601
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: Schwann cell myelin protein-like
translation: MSRPLMLLLLLPPGILAASWAAWMPPSISGLSGSCASIPCRFSFPEELRPGSVQGLWYLGSPYPRHYPPVVARSRPGAVHESFAGRARLVGDPALRDCSLELGPPLSAELAGRYYFRADLGGYNQYSFSEHAVLQVLEEPVLEVPPEVVAGAPAELRCRVPDSCPRQRPRLRWEGAQELPEVSEREWREDAAGAGAVVARLRFRPRRQDGGRRLGCQVTLPNSSLAFSAGVALDVQYEPQVLEVSGPAEALEGSEVHLGCSAEGRPAPLLTWFRGPQVLREEPGAPALPLHLPQVSPEDSGTYTCVAENRHGRHNRSLELQVAYAPRPPVLNGSLWVLAGEQVRLTCAALSHPAPILTVTRGRRPVATAVYEPQVRLELAAAAPEDAGEYLCRAENQHGHSSLAFNLTVEYPPVLLPESRCAPAGEGLARCVCAAAAVPAPSVAFELPWLNVTVAEGHRDFALTWSSPGAVRAALTLRGGLEPRLAVLCAARNGHGAARMQLRFHHPAGLVWAKVGPVGAVVAFAVVIALVCYLSQSRRKKASGSPEVTPVTPAGGRDPEPRPLQVRWLRGAVGRWALGVGEGSAAPPEAAPXPPPKPARGPPEEPPEYAEIRVK
SIO_010081: LOC121468601
subclass of: SO_0000673
so part of: LOC121468601
location: complement(join(69069..69219,69395..69470,70730..70826,72685..72975,75953..76213,79254..79514,81285..81581,86260..86631,90906..90945))
location: region:69069-90945:-1
so has part: feature:90906-90945:-1:exon
so has part: feature:86260-86631:-1:exon
so has part: feature:81285-81581:-1:exon
so has part: feature:79254-79514:-1:exon
so has part: feature:75953-76213:-1:exon
so has part: feature:72685-72975:-1:exon
so has part: feature:70730-70826:-1:exon
so has part: feature:69395-69470:-1:exon
so has part: feature:69069-69219:-1:exon

XP_041568358.1
type: Protein
SIO_000068: ncbiprotein

position:90945:-1
position: 90945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90906-90945:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:86260-86631:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:81285-81581:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:79254-79514:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:75953-76213:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:72685-72975:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:70730-70826:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:69395-69470:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:69069-69219:-1:exon

LOC121468602
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121468602
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(81779..85391)
location: region:81779-85391:-1
so has part: feature:81779-85391:-1:exon
subclass of: SO_0000010

121468602
type: Gene
SIO_000068: ncbigene

position:81779:-1
position: 81779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:85391:-1
position: 85391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81779-85391:-1:exon

LOC121468602
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC121468602
product: Schwann cell myelin protein-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_041712428.1
SIO_010081: LOC121468602
subclass of: SO_0000673
so part of: LOC121468602
location: complement(join(81779..81926,84150..84517))
location: region:81779-84517:-1
so has part: feature:84150-84517:-1:exon
so has part: feature:81779-81926:-1:exon

position:84517:-1
position: 84517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:84150-84517:-1:exon

position:84150:-1
position: 84150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:81779-81926:-1:exon

position:81926:-1
position: 81926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121468602
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC121468602
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Schwann cell myelin protein-like isoform X4
translation: MEFFGGFCGFQDAQNGFWGFLGDFWLFLGVFGDPALRDCSLELGPPLSAELAGRYYFRADLGGYNQYSFSEHAVLQVLEEPVLEVPPEVVAREGFWAGIGIFETFRPHFLG
SIO_010081: LOC121468602
subclass of: SO_0000673
so part of: LOC121468602
location: complement(join(81826..81926,84150..84384))
location: region:81826-84384:-1
so has part: feature:84150-84384:-1:exon
so has part: feature:81826-81926:-1:exon

XP_041568362.1
type: Protein
SIO_000068: ncbiprotein

position:81826:-1
position: 81826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:84384:-1
position: 84384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:84150-84384:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:81826-81926:-1:exon

LOC121468602
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC121468602
product: Schwann cell myelin protein-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XM_041712425.1
SIO_010081: LOC121468602
subclass of: SO_0000673
so part of: LOC121468602
location: complement(join(81972..82315,84150..84519))
location: region:81972-84519:-1
so has part: feature:84150-84519:-1:exon
so has part: feature:81972-82315:-1:exon

position:81972:-1
position: 81972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:84519:-1
position: 84519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:84150-84519:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:81972-82315:-1:exon

position:82315:-1
position: 82315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121468602
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC121468602
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC121468602 isoform X1
translation: MEFFGGFCGFQDAQNGFWGFLGDFWLFLGVFGDPALRDCSLELGPPLSAELAGRYYFRADLGGYNQYSFSEHAVLQVLEEPVLEVPPEVVAREGFWEYSFLGHSDPIFGLNESRMGIFGSEWGFLGGNEHFWVVIGIFGH
SIO_010081: LOC121468602
subclass of: SO_0000673
so part of: LOC121468602
location: complement(join(82128..82315,84150..84384))
location: region:82128-84384:-1
so has part: feature:84150-84384:-1:exon
so has part: feature:82128-82315:-1:exon

XP_041568359.1
type: Protein
SIO_000068: ncbiprotein

position:82128:-1
position: 82128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:84150-84384:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:82128-82315:-1:exon

LOC121468602
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 59729
gene: LOC121468602
product: Schwann cell myelin protein-like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XR_005978497.1
SIO_010081: LOC121468602
so part of: LOC121468602
location: complement(join(82328..82513,85304..85391))
location: region:82328-85391:-1
so has part: feature:85304-85391:-1:exon
so has part: feature:82328-82513:-1:exon

position:82328:-1
position: 82328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:85304-85391:-1:exon

position:85304:-1
position: 85304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:82328-82513:-1:exon

position:82513:-1
position: 82513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121468602
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC121468602
product: Schwann cell myelin protein-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 63 samples with support for all annotated introns
transcript id: XM_041712426.1
SIO_010081: LOC121468602
subclass of: SO_0000673
so part of: LOC121468602
location: complement(join(82328..82513,84150..84518))
location: region:82328-84518:-1
so has part: feature:84150-84518:-1:exon
so has part: feature:82328-82513:-1:exon

position:84518:-1
position: 84518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:84150-84518:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:82328-82513:-1:exon

LOC121468602
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC121468602
product: Schwann cell myelin protein-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_041712427.1
SIO_010081: LOC121468602
subclass of: SO_0000673
so part of: LOC121468602
location: complement(join(82345..82372,82403..82513,84150..84517))
location: region:82345-84517:-1
so has part: feature:84150-84517:-1:exon
so has part: feature:82403-82513:-1:exon
so has part: feature:82345-82372:-1:exon

position:82345:-1
position: 82345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:84150-84517:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:82403-82513:-1:exon

position:82403:-1
position: 82403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:82345-82372:-1:exon

position:82372:-1
position: 82372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121468602
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC121468602
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myelin-associated glycoprotein-like isoform X3
translation: MEFFGGFCGFQDAQNGFWGFLGDFWLFLGVFGDPALRDCSLELGPPLSAELAGRYYFRADLGGYNQYSFSEHAVLQVLEEPVLEVPPDLVAREDFWGLWTPFLGRNWDFETFQTPFFGR
SIO_010081: LOC121468602
subclass of: SO_0000673
so part of: LOC121468602
location: complement(join(82359..82372,82403..82513,84150..84384))
location: region:82359-84384:-1
so has part: feature:84150-84384:-1:exon
so has part: feature:82403-82513:-1:exon
so has part: feature:82359-82372:-1:exon

XP_041568361.1
type: Protein
SIO_000068: ncbiprotein

position:82359:-1
position: 82359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:84150-84384:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:82403-82513:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:82359-82372:-1:exon

LOC121468602
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC121468602
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC121468602 isoform X2
translation: MEFFGGFCGFQDAQNGFWGFLGDFWLFLGVFGDPALRDCSLELGPPLSAELAGRYYFRADLGGYNQYSFSEHAVLQVLEEPVLEVPPDLVAREDFWGLWTPFLGRNWDFETFQTPFFGLNESRIGIFGR
SIO_010081: LOC121468602
subclass of: SO_0000673
so part of: LOC121468602
location: complement(join(82359..82513,84150..84384))
location: region:82359-84384:-1
so has part: feature:84150-84384:-1:exon
so has part: feature:82359-82513:-1:exon

XP_041568360.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:84150-84384:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:82359-82513:-1:exon

LOC121468607
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121468607
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 95991..>108664
location: region:95991-108664:1
so has part: feature:95991-108664:1:exon
subclass of: SO_0000010

121468607
type: Gene
SIO_000068: ncbigene

position:95991:1
position: 95991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108664:1
position: 108664
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95991-108664:1:exon

LOC121468607
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC121468607
product: lipolysis-stimulated lipoprotein receptor-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_041712435.1
SIO_010081: LOC121468607
subclass of: SO_0000673
so part of: LOC121468607
location: join(95991..96119,98461..98775,101245..101364,102367..102414,103840..103986,105201..105281,105416..105466,106887..106976,108588..>108664)
location: region:95991-108664:1
so has part: feature:95991-96119:1:exon
so has part: feature:98461-98775:1:exon
so has part: feature:101245-101364:1:exon
so has part: feature:102367-102414:1:exon
so has part: feature:103840-103986:1:exon
so has part: feature:105201-105281:1:exon
so has part: feature:105416-105466:1:exon
so has part: feature:106887-106976:1:exon
so has part: feature:108588-108664:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:95991-96119:1:exon

position:96119:1
position: 96119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:98461-98775:1:exon

position:98461:1
position: 98461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:98775:1
position: 98775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:101245-101364:1:exon

position:101245:1
position: 101245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:101364:1
position: 101364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:102367-102414:1:exon

position:102367:1
position: 102367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:102414:1
position: 102414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:103840-103986:1:exon

position:103840:1
position: 103840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:103986:1
position: 103986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:105201-105281:1:exon

position:105201:1
position: 105201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:105281:1
position: 105281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:105416-105466:1:exon

position:105416:1
position: 105416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:105466:1
position: 105466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:106887-106976:1:exon

position:106887:1
position: 106887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:106976:1
position: 106976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:108588-108664:1:exon

position:108588:1
position: 108588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121468607
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC121468607
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lipolysis-stimulated lipoprotein receptor-like
translation: MAAALGALLALLGAPLQVWPLQVSVPEPRTVALLFQPVLLRCHFQVSSPGPAPIVTWKYKSFCPDTWAGPGATWDSPGEAAGACPDSARTVRIVATKQGQQVTLGDFYLGRPVTIQGGAELSLGPAAWGDSGLYLCTVTSTSDLQGNNEAVAELVVLGSLPEGSRLLPEGTLPDWLFVALVALGAGLVALGAGLCWCQCCPHTCCCYLRCPCCPRTCCCPEALYLAGKAATSGGTFGPSPHPALPLQLLGSSQSSQVPLLRDGDSAAPSGPPPSVLRYLEEQLHTWGGGGAREWPPGPAPSDVTSLHEPPRTPPPPRSRSAE
SIO_010081: LOC121468607
subclass of: SO_0000673
so part of: LOC121468607
location: join(96083..96119,98461..98775,101245..101364,102367..102414,103840..103986,105201..105281,105416..105466,106887..106976,108588..>108664)
location: region:96083-108664:1
so has part: feature:96083-96119:1:exon
so has part: feature:98461-98775:1:exon
so has part: feature:101245-101364:1:exon
so has part: feature:102367-102414:1:exon
so has part: feature:103840-103986:1:exon
so has part: feature:105201-105281:1:exon
so has part: feature:105416-105466:1:exon
so has part: feature:106887-106976:1:exon
so has part: feature:108588-108664:1:exon

XP_041568369.1
type: Protein
SIO_000068: ncbiprotein

position:96083:1
position: 96083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:96083-96119:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:98461-98775:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:101245-101364:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:102367-102414:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:103840-103986:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:105201-105281:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:105416-105466:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:106887-106976:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:108588-108664:1:exon

LOC121468609
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121468609
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 108729..109646
location: region:108729-109646:1
so has part: feature:108729-109646:1:exon
subclass of: SO_0000011

121468609
type: Gene
SIO_000068: ncbigene

position:108729:1
position: 108729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:109646:1
position: 109646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:108729-109646:1:exon

LOC121468609
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC121468609
product: uncharacterized LOC121468609
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 45 samples with support for all annotated introns
transcript id: XR_005978502.1
SIO_010081: LOC121468609
subclass of: SO_0000673
so part of: LOC121468609
location: join(108729..108813,109551..109646)
location: region:108729-109646:1
so has part: feature:108729-108813:1:exon
so has part: feature:109551-109646:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:108729-108813:1:exon

position:108813:1
position: 108813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:109551-109646:1:exon

position:109551:1
position: 109551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TMEM147
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: TMEM147
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 111016..120013
location: region:111016-120013:1
so has part: feature:111016-120013:1:exon
subclass of: SO_0000010

115492954
type: Gene
SIO_000068: ncbigene

position:111016:1
position: 111016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:120013:1
position: 120013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:111016-120013:1:exon

TMEM147
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: TMEM147
product: transmembrane protein 147, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_041712434.1
SIO_010081: TMEM147
subclass of: SO_0000673
so part of: TMEM147
location: join(111016..111281,111518..111587,112018..112083,114634..114770,115556..115640,116271..116424)
location: region:111016-116424:1
so has part: feature:111016-111281:1:exon
so has part: feature:111518-111587:1:exon
so has part: feature:112018-112083:1:exon
so has part: feature:114634-114770:1:exon
so has part: feature:115556-115640:1:exon
so has part: feature:116271-116424:1:exon

position:116424:1
position: 116424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:111016-111281:1:exon

position:111281:1
position: 111281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:111518-111587:1:exon

position:111518:1
position: 111518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:111587:1
position: 111587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:112018-112083:1:exon

position:112018:1
position: 112018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:112083:1
position: 112083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:114634-114770:1:exon

position:114634:1
position: 114634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:114770:1
position: 114770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:115556-115640:1:exon

position:115556:1
position: 115556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:115640:1
position: 115640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:116271-116424:1:exon

position:116271:1
position: 116271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TMEM147
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: TMEM147
product: transmembrane protein 147, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041712433.1
SIO_010081: TMEM147
subclass of: SO_0000673
so part of: TMEM147
location: join(111019..111281,111518..111587,112018..112083,114634..114770,115556..115640,117236..117357,119168..119318,119896..120013)
location: region:111019-120013:1
so has part: feature:111019-111281:1:exon
so has part: feature:111518-111587:1:exon
so has part: feature:112018-112083:1:exon
so has part: feature:114634-114770:1:exon
so has part: feature:115556-115640:1:exon
so has part: feature:117236-117357:1:exon
so has part: feature:119168-119318:1:exon
so has part: feature:119896-120013:1:exon

position:111019:1
position: 111019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:111019-111281:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:111518-111587:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:112018-112083:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:114634-114770:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:115556-115640:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:117236-117357:1:exon

position:117236:1
position: 117236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:117357:1
position: 117357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:119168-119318:1:exon

position:119168:1
position: 119168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:119318:1
position: 119318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:119896-120013:1:exon

position:119896:1
position: 119896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TMEM147
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: TMEM147
product: transmembrane protein 147, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_041712432.1
SIO_010081: TMEM147
subclass of: SO_0000673
so part of: TMEM147
location: join(111019..111281,111518..111587,112018..112083,114634..114770,115556..115640,117236..117357,119168..119332)
location: region:111019-119332:1
so has part: feature:111019-111281:1:exon
so has part: feature:111518-111587:1:exon
so has part: feature:112018-112083:1:exon
so has part: feature:114634-114770:1:exon
so has part: feature:115556-115640:1:exon
so has part: feature:117236-117357:1:exon
so has part: feature:119168-119332:1:exon

position:119332:1
position: 119332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:111019-111281:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:111518-111587:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:112018-112083:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:114634-114770:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:115556-115640:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:117236-117357:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:119168-119332:1:exon

TMEM147
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: TMEM147
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 147 isoform X1
translation: MTLFHFGNCFALAYFPYFITYKCSGLSEYSAFWRCVQAGATYVLVQLGKMLFLATFFPTWEGPTGGFDLLGEFLRATVDVADLGGLQLALGRGGGRGELRILVAALGWASAELLTARCVPLWVGARGVEFDWRHLQMGLDSNISLVRTVAAAALLWASGRHDLPPPLRLPLGGLLAAAAYEGFLIGWAGQALGLGPWGALGLRALGAAALGLGALRLLVPLLPPP
SIO_010081: TMEM147
subclass of: SO_0000673
so part of: TMEM147
location: join(111205..111281,111518..111587,112018..112083,114634..114770,115556..115640,117236..117357,119168..119288)
location: region:111205-119288:1
so has part: feature:111205-111281:1:exon
so has part: feature:111518-111587:1:exon
so has part: feature:112018-112083:1:exon
so has part: feature:114634-114770:1:exon
so has part: feature:115556-115640:1:exon
so has part: feature:117236-117357:1:exon
so has part: feature:119168-119288:1:exon

XP_041568366.1
type: Protein
SIO_000068: ncbiprotein

position:111205:1
position: 111205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:119288:1
position: 119288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:111205-111281:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:111518-111587:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:112018-112083:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:114634-114770:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:115556-115640:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:117236-117357:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:119168-119288:1:exon

TMEM147
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: TMEM147
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 147 isoform X1
translation: MTLFHFGNCFALAYFPYFITYKCSGLSEYSAFWRCVQAGATYVLVQLGKMLFLATFFPTWEGPTGGFDLLGEFLRATVDVADLGGLQLALGRGGGRGELRILVAALGWASAELLTARCVPLWVGARGVEFDWRHLQMGLDSNISLVRTVAAAALLWASGRHDLPPPLRLPLGGLLAAAAYEGFLIGWAGQALGLGPWGALGLRALGAAALGLGALRLLVPLLPPP
SIO_010081: TMEM147
subclass of: SO_0000673
so part of: TMEM147
location: join(111205..111281,111518..111587,112018..112083,114634..114770,115556..115640,117236..117357,119168..119288)
location: region:111205-119288:1
so has part: feature:111205-111281:1:exon
so has part: feature:111518-111587:1:exon
so has part: feature:112018-112083:1:exon
so has part: feature:114634-114770:1:exon
so has part: feature:115556-115640:1:exon
so has part: feature:117236-117357:1:exon
so has part: feature:119168-119288:1:exon

XP_041568367.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:111205-111281:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:111518-111587:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:112018-112083:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:114634-114770:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:115556-115640:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:117236-117357:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:119168-119288:1:exon

TMEM147
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: TMEM147
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 147 isoform X2
translation: MTLFHFGNCFALAYFPYFITYKCSGLSEYSAFWRCVQAGATYVLVQLGKMLFLATFFPTWEGPTGGFDLLGEFLRATVDVADLGGLQLALGRGGGRGELRILVAALGWASAELLTARCVPLWVGARGVEFDWRHLQMGLDSNISLVRTVAAVGYWFILVYTGFMGLCRFLWGYTGLNWSILVYTGPYWF
SIO_010081: TMEM147
subclass of: SO_0000673
so part of: TMEM147
location: join(111205..111281,111518..111587,112018..112083,114634..114770,115556..115640,116271..116405)
location: region:111205-116405:1
so has part: feature:111205-111281:1:exon
so has part: feature:111518-111587:1:exon
so has part: feature:112018-112083:1:exon
so has part: feature:114634-114770:1:exon
so has part: feature:115556-115640:1:exon
so has part: feature:116271-116405:1:exon

XP_041568368.1
type: Protein
SIO_000068: ncbiprotein

position:116405:1
position: 116405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:111205-111281:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:111518-111587:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:112018-112083:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:114634-114770:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:115556-115640:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:116271-116405:1:exon

LOC121468608
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121468608
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(119177..120898)
location: region:119177-120898:-1
so has part: feature:119177-120898:-1:exon
subclass of: SO_0000011

121468608
type: Gene
SIO_000068: ncbigene

position:119177:-1
position: 119177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:120898:-1
position: 120898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:119177-120898:-1:exon

LOC121468608
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC121468608
product: uncharacterized LOC121468608
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_005978501.1
SIO_010081: LOC121468608
subclass of: SO_0000673
so part of: LOC121468608
location: complement(join(119177..119293,119644..119704,119901..119973,120005..120117,120201..120323,120510..120622,120870..120898))
location: region:119177-120898:-1
so has part: feature:120870-120898:-1:exon
so has part: feature:120510-120622:-1:exon
so has part: feature:120201-120323:-1:exon
so has part: feature:120005-120117:-1:exon
so has part: feature:119901-119973:-1:exon
so has part: feature:119644-119704:-1:exon
so has part: feature:119177-119293:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:120870-120898:-1:exon

position:120870:-1
position: 120870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:120510-120622:-1:exon

position:120510:-1
position: 120510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:120622:-1
position: 120622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:120201-120323:-1:exon

position:120201:-1
position: 120201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:120323:-1
position: 120323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:120005-120117:-1:exon

position:120005:-1
position: 120005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:120117:-1
position: 120117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:119901-119973:-1:exon

position:119901:-1
position: 119901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:119973:-1
position: 119973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:119644-119704:-1:exon

position:119644:-1
position: 119644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:119704:-1
position: 119704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:119177-119293:-1:exon

position:119293:-1
position: 119293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ATP4A
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: ATP4A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 123750..156368
location: region:123750-156368:1
so has part: feature:123750-156368:1:exon
subclass of: SO_0000010

115492958
type: Gene
SIO_000068: ncbigene

position:123750:1
position: 123750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:156368:1
position: 156368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:123750-156368:1:exon

ATP4A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: ATP4A
product: ATPase H+/K+ transporting subunit alpha
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 43 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041712388.1
SIO_010081: ATP4A
subclass of: SO_0000673
so part of: ATP4A
location: join(123750..123792,125508..125594,126233..126292,126864..127067,128846..128959,129994..130128,131018..131135,133285..133553,134081..134279,135485..135594,136902..137036,138493..138673,140754..140923,141792..141928,144507..144657,146947..147115,148605..148759,149573..149696,151748..151893,153127..153260,154560..154661,155598..155689,156280..156368)
location: region:123750-156368:1
so has part: feature:123750-123792:1:exon
so has part: feature:125508-125594:1:exon
so has part: feature:126233-126292:1:exon
so has part: feature:126864-127067:1:exon
so has part: feature:128846-128959:1:exon
so has part: feature:129994-130128:1:exon
so has part: feature:131018-131135:1:exon
so has part: feature:133285-133553:1:exon
so has part: feature:134081-134279:1:exon
so has part: feature:135485-135594:1:exon
so has part: feature:136902-137036:1:exon
so has part: feature:138493-138673:1:exon
so has part: feature:140754-140923:1:exon
so has part: feature:141792-141928:1:exon
so has part: feature:144507-144657:1:exon
so has part: feature:146947-147115:1:exon
so has part: feature:148605-148759:1:exon
so has part: feature:149573-149696:1:exon
so has part: feature:151748-151893:1:exon
so has part: feature:153127-153260:1:exon
so has part: feature:154560-154661:1:exon
so has part: feature:155598-155689:1:exon
so has part: feature:156280-156368:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:123750-123792:1:exon

position:123792:1
position: 123792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:125508-125594:1:exon

position:125508:1
position: 125508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:125594:1
position: 125594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:126233-126292:1:exon

position:126233:1
position: 126233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:126292:1
position: 126292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:126864-127067:1:exon

position:126864:1
position: 126864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:127067:1
position: 127067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:128846-128959:1:exon

position:128846:1
position: 128846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:128959:1
position: 128959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:129994-130128:1:exon

position:129994:1
position: 129994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:130128:1
position: 130128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:131018-131135:1:exon

position:131018:1
position: 131018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:131135:1
position: 131135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:133285-133553:1:exon

position:133285:1
position: 133285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:133553:1
position: 133553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:134081-134279:1:exon

position:134081:1
position: 134081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:134279:1
position: 134279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:135485-135594:1:exon

position:135485:1
position: 135485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:135594:1
position: 135594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:136902-137036:1:exon

position:136902:1
position: 136902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:137036:1
position: 137036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:138493-138673:1:exon

position:138493:1
position: 138493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:138673:1
position: 138673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:140754-140923:1:exon

position:140754:1
position: 140754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:140923:1
position: 140923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:141792-141928:1:exon

position:141792:1
position: 141792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:141928:1
position: 141928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:144507-144657:1:exon

position:144507:1
position: 144507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:144657:1
position: 144657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:146947-147115:1:exon

position:146947:1
position: 146947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:147115:1
position: 147115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:148605-148759:1:exon

position:148605:1
position: 148605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:148759:1
position: 148759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:149573-149696:1:exon

position:149573:1
position: 149573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:149696:1
position: 149696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:151748-151893:1:exon

position:151748:1
position: 151748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:151893:1
position: 151893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:153127-153260:1:exon

position:153127:1
position: 153127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:153260:1
position: 153260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:154560-154661:1:exon

position:154560:1
position: 154560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:154661:1
position: 154661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:155598-155689:1:exon

position:155598:1
position: 155598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:155689:1
position: 155689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:156280-156368:1:exon

position:156280:1
position: 156280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ATP4A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: ATP4A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: potassium-transporting ATPase alpha chain 1
translation: MGKESLELRPSPRGWGRRKERQRLEEMKQELELDDHKLDVKELEIKYGTSATKGLSEAEAAARLQRDGPNALRPPRGTPGLVRFGRQLAGGLQCLMWVAAAICLIAYGVQRGQGDRGSSDNLYLAVALIAVVVVTGCFGYYQEFKSTNIIASFRNLVPQQATVVRAGQTLQVNAAELVLGDLVEIKGGDRVPADIRVLAAQGCKVDNSSLTGESEPQTRSPECTHESHLETRNIAFFSTMCLEGTATGLVIGTGERTVIGRIASLASGVGNEKTPIAVEIEHFVDIIAGLAVFFGATFFLVAMLIGYPLLRAAVFFMAIVVAYVPEGLLATVTVCLSLTAKRLARRNCVVKNLEAVETLGSTSVICSDKTGTLTQNRMAVAHLWLDGQVLAADTTEDQSGEAFEQRSASWPLLSQVITLCNRAQFQPGQEGVPVAQRDVIGDASESALLKFAEVTSGPVAAARGRFPKVAELPFNSSNKFQVSVHEAGPQQLLVLKGAPERVLERCRGYLREGEEHPLDPEWRRSLEGACLELGGRGERVLGFCARWLPPGSVAAGTPPEALAEVATGLCFAGLVSLIDPPRATVPQAVRKCRTAGIRVIMVTGDHPVTAKAIAAAVGIISEGSETPEDVATRLHLPLEQVDPRQARARVVTGSELAALAPGALEELLRTHPEMVFARTSPQQKLLIVESCQRLGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDAAKQAADMILLDDNFASIVTGVEQGRLIFDNLKKSIAYTLTKNIPELAPYLVYITASVPLPLGCITILFIELCTDIFPSVSLAYERAESDIMHLRPRDPRRDRLVNEPLAAYSYFQIGVIQSLAGFTDYFVAMAQEGWWPLLVLGLRPRWEDAHEQELQDSYGQQWTFAQRRYQQYTCYTVFFISIEVCQIADVLIRKTRRLSLLQQGLFRNRTLLVAIVFQVCIGCFLCYCPGMPNVFNFMPIRFQWWLVPMPFGLLILVYDEIRKLGVRRHPGSWWDRELYY
SIO_010081: ATP4A
subclass of: SO_0000673
so part of: ATP4A
location: join(123781..123792,125508..125594,126233..126292,126864..127067,128846..128959,129994..130128,131018..131135,133285..133553,134081..134279,135485..135594,136902..137036,138493..138673,140754..140923,141792..141928,144507..144657,146947..147115,148605..148759,149573..149696,151748..151893,153127..153260,154560..154661,155598..155689,156280..156308)
location: region:123781-156308:1
so has part: feature:123781-123792:1:exon
so has part: feature:125508-125594:1:exon
so has part: feature:126233-126292:1:exon
so has part: feature:126864-127067:1:exon
so has part: feature:128846-128959:1:exon
so has part: feature:129994-130128:1:exon
so has part: feature:131018-131135:1:exon
so has part: feature:133285-133553:1:exon
so has part: feature:134081-134279:1:exon
so has part: feature:135485-135594:1:exon
so has part: feature:136902-137036:1:exon
so has part: feature:138493-138673:1:exon
so has part: feature:140754-140923:1:exon
so has part: feature:141792-141928:1:exon
so has part: feature:144507-144657:1:exon
so has part: feature:146947-147115:1:exon
so has part: feature:148605-148759:1:exon
so has part: feature:149573-149696:1:exon
so has part: feature:151748-151893:1:exon
so has part: feature:153127-153260:1:exon
so has part: feature:154560-154661:1:exon
so has part: feature:155598-155689:1:exon
so has part: feature:156280-156308:1:exon

XP_041568322.1
type: Protein
SIO_000068: ncbiprotein

position:123781:1
position: 123781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:156308:1
position: 156308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:123781-123792:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:125508-125594:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:126233-126292:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:126864-127067:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:128846-128959:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:129994-130128:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:131018-131135:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:133285-133553:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:134081-134279:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:135485-135594:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:136902-137036:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:138493-138673:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:140754-140923:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:141792-141928:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:144507-144657:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:146947-147115:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:148605-148759:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:149573-149696:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:151748-151893:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:153127-153260:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:154560-154661:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:155598-155689:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:156280-156308:1:exon

ETFB
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: ETFB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 157329..172736
location: region:157329-172736:1
so has part: feature:157329-172736:1:exon
subclass of: SO_0000010

100225958
type: Gene
SIO_000068: ncbigene

position:157329:1
position: 157329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:172736:1
position: 172736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:157329-172736:1:exon

ETFB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: ETFB
product: electron transfer flavoprotein subunit beta, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_041712386.1
SIO_010081: ETFB
subclass of: SO_0000673
so part of: ETFB
location: join(157329..157472,158951..159109,161974..162126,164335..164397,165760..165918,171227..171381,172410..172736)
location: region:157329-172736:1
so has part: feature:157329-157472:1:exon
so has part: feature:158951-159109:1:exon
so has part: feature:161974-162126:1:exon
so has part: feature:164335-164397:1:exon
so has part: feature:165760-165918:1:exon
so has part: feature:171227-171381:1:exon
so has part: feature:172410-172736:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:157329-157472:1:exon

position:157472:1
position: 157472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:158951-159109:1:exon

position:158951:1
position: 158951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:159109:1
position: 159109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:161974-162126:1:exon

position:161974:1
position: 161974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:162126:1
position: 162126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:164335-164397:1:exon

position:164335:1
position: 164335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:164397:1
position: 164397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:165760-165918:1:exon

position:165760:1
position: 165760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:165918:1
position: 165918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:171227-171381:1:exon

position:171227:1
position: 171227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:171381:1
position: 171381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:172410-172736:1:exon

position:172410:1
position: 172410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ETFB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: ETFB
product: electron transfer flavoprotein subunit beta, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 long SRA read, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 139 samples with support for all annotated introns
transcript id: XM_030262189.3
SIO_010081: ETFB
subclass of: SO_0000673
so part of: ETFB
location: join(157329..157472,158951..159109,161974..162126,164335..164397,165760..165918,171227..171969)
location: region:157329-171969:1
so has part: feature:157329-157472:1:exon
so has part: feature:158951-159109:1:exon
so has part: feature:161974-162126:1:exon
so has part: feature:164335-164397:1:exon
so has part: feature:165760-165918:1:exon
so has part: feature:171227-171969:1:exon

position:171969:1
position: 171969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:157329-157472:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:158951-159109:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:161974-162126:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:164335-164397:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:165760-165918:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:171227-171969:1:exon

ETFB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: ETFB
product: electron transfer flavoprotein subunit beta, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_041712385.1
SIO_010081: ETFB
subclass of: SO_0000673
so part of: ETFB
location: join(157329..157472,158951..159109,161974..162126,164335..164397,165760..165918,171227..171381,171519..171969)
location: region:157329-171969:1
so has part: feature:157329-157472:1:exon
so has part: feature:158951-159109:1:exon
so has part: feature:161974-162126:1:exon
so has part: feature:164335-164397:1:exon
so has part: feature:165760-165918:1:exon
so has part: feature:171227-171381:1:exon
so has part: feature:171519-171969:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:157329-157472:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:158951-159109:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:161974-162126:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:164335-164397:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:165760-165918:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:171227-171381:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:171519-171969:1:exon

position:171519:1
position: 171519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ETFB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: ETFB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: electron transfer flavoprotein subunit beta isoform X3
translation: MAALRVLVGVKRVIDFAVKVRVAPGGAAVQTQGVKHSLNPFCEIALEEAVRLREAGAAAEVVVATLGTKASQETLRTALAMGADRAVLAELAEGAAAGPREVAVALAALARRLQPQLVLLGKQAIDDDCNQTGQILAAILDWPQGTFASRVSLEPGAVQVQREVDGGLETLRLRLPAVLTADLRLNEPRYATLPNIMKAKKKPLEVVPAADLGVPAGPPRLRLLQLQEPPPRAGGEKVESVESLLGKLRHAGRI
SIO_010081: ETFB
subclass of: SO_0000673
so part of: ETFB
location: join(157416..157472,158951..159109,161974..162126,164335..164397,165760..165918,171227..171381,172410..172428)
location: region:157416-172428:1
so has part: feature:157416-157472:1:exon
so has part: feature:158951-159109:1:exon
so has part: feature:161974-162126:1:exon
so has part: feature:164335-164397:1:exon
so has part: feature:165760-165918:1:exon
so has part: feature:171227-171381:1:exon
so has part: feature:172410-172428:1:exon

XP_041568320.1
type: Protein
SIO_000068: ncbiprotein

position:157416:1
position: 157416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:172428:1
position: 172428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:157416-157472:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:158951-159109:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:161974-162126:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:164335-164397:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:165760-165918:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:171227-171381:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:172410-172428:1:exon

ETFB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: ETFB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: electron transfer flavoprotein subunit beta isoform X2
translation: MAALRVLVGVKRVIDFAVKVRVAPGGAAVQTQGVKHSLNPFCEIALEEAVRLREAGAAAEVVVATLGTKASQETLRTALAMGADRAVLAELAEGAAAGPREVAVALAALARRLQPQLVLLGKQAIDDDCNQTGQILAAILDWPQGTFASRVSLEPGAVQVQREVDGGLETLRLRLPAVLTADLRLNEPRYATLPNIMKAKKKPLEVVPAADLGVPAGPPRLRLLQLQEPPPRAGGEKVESVESLLGKLRHAGRI
SIO_010081: ETFB
subclass of: SO_0000673
so part of: ETFB
location: join(157416..157472,158951..159109,161974..162126,164335..164397,165760..165918,171227..171381,171519..171537)
location: region:157416-171537:1
so has part: feature:157416-157472:1:exon
so has part: feature:158951-159109:1:exon
so has part: feature:161974-162126:1:exon
so has part: feature:164335-164397:1:exon
so has part: feature:165760-165918:1:exon
so has part: feature:171227-171381:1:exon
so has part: feature:171519-171537:1:exon

XP_041568319.1
type: Protein
SIO_000068: ncbiprotein

position:171537:1
position: 171537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:157416-157472:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:158951-159109:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:161974-162126:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:164335-164397:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:165760-165918:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:171227-171381:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:171519-171537:1:exon

ETFB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: ETFB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: electron transfer flavoprotein subunit beta isoform X1
translation: MAALRVLVGVKRVIDFAVKVRVAPGGAAVQTQGVKHSLNPFCEIALEEAVRLREAGAAAEVVVATLGTKASQETLRTALAMGADRAVLAELAEGAAAGPREVAVALAALARRLQPQLVLLGKQAIDDDCNQTGQILAAILDWPQGTFASRVSLEPGAVQVQREVDGGLETLRLRLPAVLTADLRLNEPRYATLPNIMKAKKKPLEVVPAADLGVPAGPPRLRLLQLQEPPPRAGGEKVESVESLLGKLRHAGRI
SIO_010081: ETFB
subclass of: SO_0000673
so part of: ETFB
location: join(157416..157472,158951..159109,161974..162126,164335..164397,165760..165918,171227..171400)
location: region:157416-171400:1
so has part: feature:157416-157472:1:exon
so has part: feature:158951-159109:1:exon
so has part: feature:161974-162126:1:exon
so has part: feature:164335-164397:1:exon
so has part: feature:165760-165918:1:exon
so has part: feature:171227-171400:1:exon

XP_030118049.3
type: Protein
SIO_000068: ncbiprotein

position:171400:1
position: 171400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:157416-157472:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:158951-159109:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:161974-162126:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:164335-164397:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:165760-165918:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:171227-171400:1:exon

PPP2R1A
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: PPP2R1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 173868..193092
location: region:173868-193092:1
so has part: feature:173868-193092:1:exon
subclass of: SO_0000010

100217782
type: Gene
SIO_000068: ncbigene

position:173868:1
position: 173868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:193092:1
position: 193092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:173868-193092:1:exon

PPP2R1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: PPP2R1A
product: protein phosphatase 2 scaffold subunit Aalpha, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 159 ESTs, 1 long SRA read, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 63 samples with support for all annotated introns
transcript id: XM_041712371.1
SIO_010081: PPP2R1A
subclass of: SO_0000673
so part of: PPP2R1A
location: join(173868..174019,174618..174708,174927..175027,177182..177414,179649..179796,181257..181412,182266..182380,183272..183342,184238..184372,186061..186234,187974..188034,189380..189534,190494..190505,191107..191237,192166..192257,192904..193092)
location: region:173868-193092:1
so has part: feature:173868-174019:1:exon
so has part: feature:174618-174708:1:exon
so has part: feature:174927-175027:1:exon
so has part: feature:177182-177414:1:exon
so has part: feature:179649-179796:1:exon
so has part: feature:181257-181412:1:exon
so has part: feature:182266-182380:1:exon
so has part: feature:183272-183342:1:exon
so has part: feature:184238-184372:1:exon
so has part: feature:186061-186234:1:exon
so has part: feature:187974-188034:1:exon
so has part: feature:189380-189534:1:exon
so has part: feature:190494-190505:1:exon
so has part: feature:191107-191237:1:exon
so has part: feature:192166-192257:1:exon
so has part: feature:192904-193092:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:173868-174019:1:exon

position:174019:1
position: 174019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:174618-174708:1:exon

position:174618:1
position: 174618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:174708:1
position: 174708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:174927-175027:1:exon

position:174927:1
position: 174927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:175027:1
position: 175027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:177182-177414:1:exon

position:177182:1
position: 177182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:177414:1
position: 177414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:179649-179796:1:exon

position:179649:1
position: 179649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:179796:1
position: 179796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:181257-181412:1:exon

position:181257:1
position: 181257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:181412:1
position: 181412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:182266-182380:1:exon

position:182266:1
position: 182266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:182380:1
position: 182380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:183272-183342:1:exon

position:183272:1
position: 183272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:183342:1
position: 183342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:184238-184372:1:exon

position:184238:1
position: 184238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:184372:1
position: 184372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:186061-186234:1:exon

position:186061:1
position: 186061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:186234:1
position: 186234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:187974-188034:1:exon

position:187974:1
position: 187974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:188034:1
position: 188034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:189380-189534:1:exon

position:189380:1
position: 189380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:189534:1
position: 189534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:190494-190505:1:exon

position:190494:1
position: 190494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:190505:1
position: 190505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:191107-191237:1:exon

position:191107:1
position: 191107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:191237:1
position: 191237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:192166-192257:1:exon

position:192166:1
position: 192166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:192257:1
position: 192257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:192904-193092:1:exon

position:192904:1
position: 192904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PPP2R1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: PPP2R1A
product: protein phosphatase 2 scaffold subunit Aalpha, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 150 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 77 samples with support for all annotated introns
transcript id: XM_041712372.1
SIO_010081: PPP2R1A
subclass of: SO_0000673
so part of: PPP2R1A
location: join(173868..174019,174618..174708,174927..175027,177182..177414,179649..179796,181257..181412,182266..182380,183272..183342,184238..184372,186061..186234,187974..188034,189380..189534,190789..190830,191137..191237,192166..192257,192904..193092)
location: region:173868-193092:1
so has part: feature:173868-174019:1:exon
so has part: feature:174618-174708:1:exon
so has part: feature:174927-175027:1:exon
so has part: feature:177182-177414:1:exon
so has part: feature:179649-179796:1:exon
so has part: feature:181257-181412:1:exon
so has part: feature:182266-182380:1:exon
so has part: feature:183272-183342:1:exon
so has part: feature:184238-184372:1:exon
so has part: feature:186061-186234:1:exon
so has part: feature:187974-188034:1:exon
so has part: feature:189380-189534:1:exon
so has part: feature:190789-190830:1:exon
so has part: feature:191137-191237:1:exon
so has part: feature:192166-192257:1:exon
so has part: feature:192904-193092:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:173868-174019:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:174618-174708:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:174927-175027:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:177182-177414:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:179649-179796:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:181257-181412:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:182266-182380:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:183272-183342:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:184238-184372:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:186061-186234:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:187974-188034:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:189380-189534:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:190789-190830:1:exon

position:190789:1
position: 190789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:190830:1
position: 190830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:191137-191237:1:exon

position:191137:1
position: 191137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:192166-192257:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:192904-193092:1:exon

PPP2R1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: PPP2R1A
product: protein phosphatase 2 scaffold subunit Aalpha, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 150 ESTs, 11 long SRA reads, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 102 samples with support for all annotated introns
transcript id: XM_030262180.3
SIO_010081: PPP2R1A
subclass of: SO_0000673
so part of: PPP2R1A
location: join(173868..174019,174618..174708,174927..175027,177182..177414,179649..179796,181257..181412,182266..182380,183272..183342,184238..184372,186061..186234,187974..188034,189380..189534,191095..191237,192166..192257,192904..193092)
location: region:173868-193092:1
so has part: feature:173868-174019:1:exon
so has part: feature:174618-174708:1:exon
so has part: feature:174927-175027:1:exon
so has part: feature:177182-177414:1:exon
so has part: feature:179649-179796:1:exon
so has part: feature:181257-181412:1:exon
so has part: feature:182266-182380:1:exon
so has part: feature:183272-183342:1:exon
so has part: feature:184238-184372:1:exon
so has part: feature:186061-186234:1:exon
so has part: feature:187974-188034:1:exon
so has part: feature:189380-189534:1:exon
so has part: feature:191095-191237:1:exon
so has part: feature:192166-192257:1:exon
so has part: feature:192904-193092:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:173868-174019:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:174618-174708:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:174927-175027:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:177182-177414:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:179649-179796:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:181257-181412:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:182266-182380:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:183272-183342:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:184238-184372:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:186061-186234:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:187974-188034:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:189380-189534:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:191095-191237:1:exon

position:191095:1
position: 191095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:192166-192257:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:192904-193092:1:exon

PPP2R1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: PPP2R1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform isoform X2
translation: MAAADGDDSLYPIAVLIDELRNEDVQLRLNSIKKLSTIALALGVERTRSELLPFLTDTIYDEDEVLLALAEQLGTFTALVGGPEFVHCLLPPLESLATVEETVVRDKAVESLRAVSHEHSPPDLEGHFVPLVKRLAGGDWFTSRTSACGLFSVCYPRVSSPVKAELRQYFRNLCSDDTPMVRRAAASKLGEFAKVLELEHVKSEIIPMFSNLASDEQDSVRLLAVEACVSIAQLLPQEELEGLVMPTLRQAAEDKSWRVRYMVADKFTELQRAVGPEITKTDLVGAFQSLMKDCEAEVRAAASHKVKEFCENLSPDCREAVIMGQILPCIKELVSDANQHVKSALASVIMGLSPILGKDNTVEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATSNLRKLVERFGHTWAQGTIVPKVLAMAADPNYLHRMTTLFCINVLSEVCGQEVTTTQMLPTVLRMAADAVANVRFNVAKSLQRIGPILDSGTLQTEVKPVLEKLTQDQDVDVKYFAQEALTVLALA
SIO_010081: PPP2R1A
subclass of: SO_0000673
so part of: PPP2R1A
location: join(173942..174019,174618..174708,174927..175027,177182..177414,179649..179796,181257..181412,182266..182380,183272..183342,184238..184372,186061..186234,187974..188034,189380..189534,190494..190505,191107..191237,192166..192257,192904..192920)
location: region:173942-192920:1
so has part: feature:173942-174019:1:exon
so has part: feature:174618-174708:1:exon
so has part: feature:174927-175027:1:exon
so has part: feature:177182-177414:1:exon
so has part: feature:179649-179796:1:exon
so has part: feature:181257-181412:1:exon
so has part: feature:182266-182380:1:exon
so has part: feature:183272-183342:1:exon
so has part: feature:184238-184372:1:exon
so has part: feature:186061-186234:1:exon
so has part: feature:187974-188034:1:exon
so has part: feature:189380-189534:1:exon
so has part: feature:190494-190505:1:exon
so has part: feature:191107-191237:1:exon
so has part: feature:192166-192257:1:exon
so has part: feature:192904-192920:1:exon

XP_041568305.1
type: Protein
SIO_000068: ncbiprotein

position:173942:1
position: 173942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:192920:1
position: 192920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:173942-174019:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:174618-174708:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:174927-175027:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:177182-177414:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:179649-179796:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:181257-181412:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:182266-182380:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:183272-183342:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:184238-184372:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:186061-186234:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:187974-188034:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:189380-189534:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:190494-190505:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:191107-191237:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:192166-192257:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:192904-192920:1:exon

PPP2R1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: PPP2R1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform isoform X3
translation: MAAADGDDSLYPIAVLIDELRNEDVQLRLNSIKKLSTIALALGVERTRSELLPFLTDTIYDEDEVLLALAEQLGTFTALVGGPEFVHCLLPPLESLATVEETVVRDKAVESLRAVSHEHSPPDLEGHFVPLVKRLAGGDWFTSRTSACGLFSVCYPRVSSPVKAELRQYFRNLCSDDTPMVRRAAASKLGEFAKVLELEHVKSEIIPMFSNLASDEQDSVRLLAVEACVSIAQLLPQEELEGLVMPTLRQAAEDKSWRVRYMVADKFTELQRAVGPEITKTDLVGAFQSLMKDCEAEVRAAASHKVKEFCENLSPDCREAVIMGQILPCIKELVSDANQHVKSALASVIMGLSPILGKDNTVEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATSNLRKLVERFGHTWAQGTIVPKVLAMAADPNYLHRMTTLFCINVLSEVCGQEVTTTQMLPTVLRMAADAVANVRFNVAKSLQRIGPILDSGTLQTEVKPVLEKLTQDQDVDVKYFAQEALTVLALA
SIO_010081: PPP2R1A
subclass of: SO_0000673
so part of: PPP2R1A
location: join(173942..174019,174618..174708,174927..175027,177182..177414,179649..179796,181257..181412,182266..182380,183272..183342,184238..184372,186061..186234,187974..188034,189380..189534,190789..190830,191137..191237,192166..192257,192904..192920)
location: region:173942-192920:1
so has part: feature:173942-174019:1:exon
so has part: feature:174618-174708:1:exon
so has part: feature:174927-175027:1:exon
so has part: feature:177182-177414:1:exon
so has part: feature:179649-179796:1:exon
so has part: feature:181257-181412:1:exon
so has part: feature:182266-182380:1:exon
so has part: feature:183272-183342:1:exon
so has part: feature:184238-184372:1:exon
so has part: feature:186061-186234:1:exon
so has part: feature:187974-188034:1:exon
so has part: feature:189380-189534:1:exon
so has part: feature:190789-190830:1:exon
so has part: feature:191137-191237:1:exon
so has part: feature:192166-192257:1:exon
so has part: feature:192904-192920:1:exon

XP_041568306.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:173942-174019:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:174618-174708:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:174927-175027:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:177182-177414:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:179649-179796:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:181257-181412:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:182266-182380:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:183272-183342:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:184238-184372:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:186061-186234:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:187974-188034:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:189380-189534:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:190789-190830:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:191137-191237:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:192166-192257:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:192904-192920:1:exon

PPP2R1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: PPP2R1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform isoform X1
translation: MAAADGDDSLYPIAVLIDELRNEDVQLRLNSIKKLSTIALALGVERTRSELLPFLTDTIYDEDEVLLALAEQLGTFTALVGGPEFVHCLLPPLESLATVEETVVRDKAVESLRAVSHEHSPPDLEGHFVPLVKRLAGGDWFTSRTSACGLFSVCYPRVSSPVKAELRQYFRNLCSDDTPMVRRAAASKLGEFAKVLELEHVKSEIIPMFSNLASDEQDSVRLLAVEACVSIAQLLPQEELEGLVMPTLRQAAEDKSWRVRYMVADKFTELQRAVGPEITKTDLVGAFQSLMKDCEAEVRAAASHKVKEFCENLSPDCREAVIMGQILPCIKELVSDANQHVKSALASVIMGLSPILGKDNTVEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATSNLRKLVERFGHTWAQGTIVPKVLAMAADPNYLHRMTTLFCINVLSEVCGQEVTTTQMLPTVLRMAADAVANVRFNVAKSLQRIGPILDSGTLQTEVKPVLEKLTQDQDVDVKYFAQEALTVLALA
SIO_010081: PPP2R1A
subclass of: SO_0000673
so part of: PPP2R1A
location: join(173942..174019,174618..174708,174927..175027,177182..177414,179649..179796,181257..181412,182266..182380,183272..183342,184238..184372,186061..186234,187974..188034,189380..189534,191095..191237,192166..192257,192904..192920)
location: region:173942-192920:1
so has part: feature:173942-174019:1:exon
so has part: feature:174618-174708:1:exon
so has part: feature:174927-175027:1:exon
so has part: feature:177182-177414:1:exon
so has part: feature:179649-179796:1:exon
so has part: feature:181257-181412:1:exon
so has part: feature:182266-182380:1:exon
so has part: feature:183272-183342:1:exon
so has part: feature:184238-184372:1:exon
so has part: feature:186061-186234:1:exon
so has part: feature:187974-188034:1:exon
so has part: feature:189380-189534:1:exon
so has part: feature:191095-191237:1:exon
so has part: feature:192166-192257:1:exon
so has part: feature:192904-192920:1:exon

XP_030118040.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:173942-174019:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:174618-174708:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:174927-175027:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:177182-177414:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:179649-179796:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:181257-181412:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:182266-182380:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:183272-183342:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:184238-184372:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:186061-186234:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:187974-188034:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:189380-189534:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:191095-191237:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:192166-192257:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:192904-192920:1:exon

LOC121468581
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121468581
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(190366..191010)
location: region:190366-191010:-1
so has part: feature:190366-191010:-1:exon
subclass of: SO_0000011

121468581
type: Gene
SIO_000068: ncbigene

position:190366:-1
position: 190366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:191010:-1
position: 191010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:190366-191010:-1:exon

LOC121468581
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC121468581
product: uncharacterized LOC121468581
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_005978494.1
SIO_010081: LOC121468581
subclass of: SO_0000673
so part of: LOC121468581
location: complement(join(190366..190448,190898..191010))
location: region:190366-191010:-1
so has part: feature:190898-191010:-1:exon
so has part: feature:190366-190448:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:190898-191010:-1:exon

position:190898:-1
position: 190898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:190366-190448:-1:exon

position:190448:-1
position: 190448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SMG9
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: SMG9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 193427..203912
location: region:193427-203912:1
so has part: feature:193427-203912:1:exon
subclass of: SO_0000010

115492905
type: Gene
SIO_000068: ncbigene

position:193427:1
position: 193427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:203912:1
position: 203912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:193427-203912:1:exon

SMG9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: SMG9
product: SMG9 nonsense mediated mRNA decay factor, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_041712375.1
SIO_010081: SMG9
subclass of: SO_0000673
so part of: SMG9
location: join(193427..193581,194586..194657,194730..194973,195583..195680,195767..195879,196729..196840,197424..197519,197599..197675,199278..199381,200296..200403,201151..201279,202320..202461,203569..203912)
location: region:193427-203912:1
so has part: feature:193427-193581:1:exon
so has part: feature:194586-194657:1:exon
so has part: feature:194730-194973:1:exon
so has part: feature:195583-195680:1:exon
so has part: feature:195767-195879:1:exon
so has part: feature:196729-196840:1:exon
so has part: feature:197424-197519:1:exon
so has part: feature:197599-197675:1:exon
so has part: feature:199278-199381:1:exon
so has part: feature:200296-200403:1:exon
so has part: feature:201151-201279:1:exon
so has part: feature:202320-202461:1:exon
so has part: feature:203569-203912:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:193427-193581:1:exon

position:193581:1
position: 193581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:194586-194657:1:exon

position:194586:1
position: 194586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:194657:1
position: 194657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:194730-194973:1:exon

position:194730:1
position: 194730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:194973:1
position: 194973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:195583-195680:1:exon

position:195583:1
position: 195583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:195680:1
position: 195680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:195767-195879:1:exon

position:195767:1
position: 195767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:195879:1
position: 195879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:196729-196840:1:exon

position:196729:1
position: 196729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:196840:1
position: 196840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:197424-197519:1:exon

position:197424:1
position: 197424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:197519:1
position: 197519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:197599-197675:1:exon

position:197599:1
position: 197599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:197675:1
position: 197675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:199278-199381:1:exon

position:199278:1
position: 199278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:199381:1
position: 199381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:200296-200403:1:exon

position:200296:1
position: 200296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:200403:1
position: 200403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:201151-201279:1:exon

position:201151:1
position: 201151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:201279:1
position: 201279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:202320-202461:1:exon

position:202320:1
position: 202320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:202461:1
position: 202461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:203569-203912:1:exon

position:203569:1
position: 203569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SMG9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: SMG9
product: SMG9 nonsense mediated mRNA decay factor, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 46 samples with support for all annotated introns
transcript id: XM_041712373.1
SIO_010081: SMG9
subclass of: SO_0000673
so part of: SMG9
location: join(193430..193581,194586..194657,194730..194973,195583..195680,195767..195879,196729..196840,197424..197519,197590..197675,199278..199381,200296..200403,201151..201279,202320..202461,203569..203912)
location: region:193430-203912:1
so has part: feature:193430-193581:1:exon
so has part: feature:194586-194657:1:exon
so has part: feature:194730-194973:1:exon
so has part: feature:195583-195680:1:exon
so has part: feature:195767-195879:1:exon
so has part: feature:196729-196840:1:exon
so has part: feature:197424-197519:1:exon
so has part: feature:197590-197675:1:exon
so has part: feature:199278-199381:1:exon
so has part: feature:200296-200403:1:exon
so has part: feature:201151-201279:1:exon
so has part: feature:202320-202461:1:exon
so has part: feature:203569-203912:1:exon

position:193430:1
position: 193430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:193430-193581:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:194586-194657:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:194730-194973:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:195583-195680:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:195767-195879:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:196729-196840:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:197424-197519:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:197590-197675:1:exon

position:197590:1
position: 197590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:199278-199381:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:200296-200403:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:201151-201279:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:202320-202461:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:203569-203912:1:exon

SMG9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: SMG9
product: SMG9 nonsense mediated mRNA decay factor, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 86 samples with support for all annotated introns
transcript id: XM_041712374.1
SIO_010081: SMG9
subclass of: SO_0000673
so part of: SMG9
location: join(193430..193581,194586..194657,194733..194973,195583..195680,195767..195879,196729..196840,197424..197519,197590..197675,199278..199381,200296..200403,201151..201279,202320..202461,203569..203912)
location: region:193430-203912:1
so has part: feature:193430-193581:1:exon
so has part: feature:194586-194657:1:exon
so has part: feature:194733-194973:1:exon
so has part: feature:195583-195680:1:exon
so has part: feature:195767-195879:1:exon
so has part: feature:196729-196840:1:exon
so has part: feature:197424-197519:1:exon
so has part: feature:197590-197675:1:exon
so has part: feature:199278-199381:1:exon
so has part: feature:200296-200403:1:exon
so has part: feature:201151-201279:1:exon
so has part: feature:202320-202461:1:exon
so has part: feature:203569-203912:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:193430-193581:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:194586-194657:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:194733-194973:1:exon

position:194733:1
position: 194733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:195583-195680:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:195767-195879:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:196729-196840:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:197424-197519:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:197590-197675:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:199278-199381:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:200296-200403:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:201151-201279:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:202320-202461:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:203569-203912:1:exon

SMG9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: SMG9
product: SMG9 nonsense mediated mRNA decay factor, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_041712377.1
SIO_010081: SMG9
subclass of: SO_0000673
so part of: SMG9
location: join(193430..193581,194586..194657,194757..194973,195583..195680,195767..195879,196729..196840,197424..197519,197590..197675,199278..199381,200296..200403,201151..201279,202320..202461,203569..203912)
location: region:193430-203912:1
so has part: feature:193430-193581:1:exon
so has part: feature:194586-194657:1:exon
so has part: feature:194757-194973:1:exon
so has part: feature:195583-195680:1:exon
so has part: feature:195767-195879:1:exon
so has part: feature:196729-196840:1:exon
so has part: feature:197424-197519:1:exon
so has part: feature:197590-197675:1:exon
so has part: feature:199278-199381:1:exon
so has part: feature:200296-200403:1:exon
so has part: feature:201151-201279:1:exon
so has part: feature:202320-202461:1:exon
so has part: feature:203569-203912:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:193430-193581:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:194586-194657:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:194757-194973:1:exon

position:194757:1
position: 194757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:195583-195680:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:195767-195879:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:196729-196840:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:197424-197519:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:197590-197675:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:199278-199381:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:200296-200403:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:201151-201279:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:202320-202461:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:203569-203912:1:exon

SMG9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: SMG9
product: SMG9 nonsense mediated mRNA decay factor, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_041712376.1
SIO_010081: SMG9
subclass of: SO_0000673
so part of: SMG9
location: join(193430..193563,194586..194657,194730..194973,195583..195680,195767..195879,196729..196840,197424..197519,197590..197675,199278..199381,200296..200403,201151..201279,202320..202461,203569..203912)
location: region:193430-203912:1
so has part: feature:193430-193563:1:exon
so has part: feature:194586-194657:1:exon
so has part: feature:194730-194973:1:exon
so has part: feature:195583-195680:1:exon
so has part: feature:195767-195879:1:exon
so has part: feature:196729-196840:1:exon
so has part: feature:197424-197519:1:exon
so has part: feature:197590-197675:1:exon
so has part: feature:199278-199381:1:exon
so has part: feature:200296-200403:1:exon
so has part: feature:201151-201279:1:exon
so has part: feature:202320-202461:1:exon
so has part: feature:203569-203912:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:193430-193563:1:exon

position:193563:1
position: 193563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:194586-194657:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:194730-194973:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:195583-195680:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:195767-195879:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:196729-196840:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:197424-197519:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:197590-197675:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:199278-199381:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:200296-200403:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:201151-201279:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:202320-202461:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:203569-203912:1:exon

SMG9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: SMG9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein SMG9 isoform X1
translation: MSDSGQSPAPGARRRCWTREKETEGGGERREQGEEPAGPLQKTPIILAKPPAERQQPPPAAPKAGPAQAPPPPAPAPPIVLMKARGEDGRGGGGASAAPGEGPQQAPPTEREGPRPTQPVYQLHSRGLAPPAALDPAQAQARLAAPEKMKTSIKLVDEQMNWCDSALEFLLEQTDVLVVGALGLQGTGKSTVMSLLAGNQPEEDPRSFVFRPQPPELRERGGAQTGGIDLFVTQERVLFLDTQPILSPAHLDHLINNDRKLPPEFALPHAYVETQSLQIAAFLFTVCHVVLLVQDWFTDLGLYRFLQTAEMVKPPTPSPSHDSSGAGAEEPSEYYPHLVFVQTRAPPECFSPRRVGQMQRVLGRLMAHSRLKYRGSLSMRELLPSPPGAPPGPPPEPEVNLFLLPPLEEEPEDALPRGGGGALFPALPPFRGRGGLGGLLARLRGRVLAAARSQLSHSLLTERNWFHYAARIWDGVKKSSALAEYGRLLG
SIO_010081: SMG9
subclass of: SO_0000673
so part of: SMG9
location: join(193492..193581,194586..194657,194730..194973,195583..195680,195767..195879,196729..196840,197424..197519,197590..197675,199278..199381,200296..200403,201151..201279,202320..202461,203569..203647)
location: region:193492-203647:1
so has part: feature:193492-193581:1:exon
so has part: feature:194586-194657:1:exon
so has part: feature:194730-194973:1:exon
so has part: feature:195583-195680:1:exon
so has part: feature:195767-195879:1:exon
so has part: feature:196729-196840:1:exon
so has part: feature:197424-197519:1:exon
so has part: feature:197590-197675:1:exon
so has part: feature:199278-199381:1:exon
so has part: feature:200296-200403:1:exon
so has part: feature:201151-201279:1:exon
so has part: feature:202320-202461:1:exon
so has part: feature:203569-203647:1:exon

XP_041568307.1
type: Protein
SIO_000068: ncbiprotein

position:193492:1
position: 193492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:203647:1
position: 203647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:193492-193581:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:194586-194657:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:194730-194973:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:195583-195680:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:195767-195879:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:196729-196840:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:197424-197519:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:197590-197675:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:199278-199381:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:200296-200403:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:201151-201279:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:202320-202461:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:203569-203647:1:exon

SMG9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: SMG9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein SMG9 isoform X3
translation: MSDSGQSPAPGARRRCWTREKETEGGGERREQGEEPAGPLQKTPIILAKPPAERQQPPPAAPKAGPAQAPPPPAPAPPIVLMKARGEDGRGGGGASAAPGEGPQQAPPTEREGPRPTQPVYQLHSRGLAPPAALDPAQAQARLAAPEKMKTSIKLVDEQMNWCDSALEFLLEQTDVLVVGALGLQGTGKSTVMSLLAGNQPEEDPRSFVFRPQPPELRERGGAQTGGIDLFVTQERVLFLDTQPILSPAHLDHLINNDRKLPPEFALPHAYVETQIAAFLFTVCHVVLLVQDWFTDLGLYRFLQTAEMVKPPTPSPSHDSSGAGAEEPSEYYPHLVFVQTRAPPECFSPRRVGQMQRVLGRLMAHSRLKYRGSLSMRELLPSPPGAPPGPPPEPEVNLFLLPPLEEEPEDALPRGGGGALFPALPPFRGRGGLGGLLARLRGRVLAAARSQLSHSLLTERNWFHYAARIWDGVKKSSALAEYGRLLG
SIO_010081: SMG9
subclass of: SO_0000673
so part of: SMG9
location: join(193492..193581,194586..194657,194730..194973,195583..195680,195767..195879,196729..196840,197424..197519,197599..197675,199278..199381,200296..200403,201151..201279,202320..202461,203569..203647)
location: region:193492-203647:1
so has part: feature:193492-193581:1:exon
so has part: feature:194586-194657:1:exon
so has part: feature:194730-194973:1:exon
so has part: feature:195583-195680:1:exon
so has part: feature:195767-195879:1:exon
so has part: feature:196729-196840:1:exon
so has part: feature:197424-197519:1:exon
so has part: feature:197599-197675:1:exon
so has part: feature:199278-199381:1:exon
so has part: feature:200296-200403:1:exon
so has part: feature:201151-201279:1:exon
so has part: feature:202320-202461:1:exon
so has part: feature:203569-203647:1:exon

XP_041568309.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:193492-193581:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:194586-194657:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:194730-194973:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:195583-195680:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:195767-195879:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:196729-196840:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:197424-197519:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:197599-197675:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:199278-199381:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:200296-200403:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:201151-201279:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:202320-202461:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:203569-203647:1:exon

SMG9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: SMG9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein SMG9 isoform X2
translation: MSDSGQSPAPGARRRCWTREKETEGGGERREQGEEPAGPLQKTPIILAKPPAERQPPPAAPKAGPAQAPPPPAPAPPIVLMKARGEDGRGGGGASAAPGEGPQQAPPTEREGPRPTQPVYQLHSRGLAPPAALDPAQAQARLAAPEKMKTSIKLVDEQMNWCDSALEFLLEQTDVLVVGALGLQGTGKSTVMSLLAGNQPEEDPRSFVFRPQPPELRERGGAQTGGIDLFVTQERVLFLDTQPILSPAHLDHLINNDRKLPPEFALPHAYVETQSLQIAAFLFTVCHVVLLVQDWFTDLGLYRFLQTAEMVKPPTPSPSHDSSGAGAEEPSEYYPHLVFVQTRAPPECFSPRRVGQMQRVLGRLMAHSRLKYRGSLSMRELLPSPPGAPPGPPPEPEVNLFLLPPLEEEPEDALPRGGGGALFPALPPFRGRGGLGGLLARLRGRVLAAARSQLSHSLLTERNWFHYAARIWDGVKKSSALAEYGRLLG
SIO_010081: SMG9
subclass of: SO_0000673
so part of: SMG9
location: join(193492..193581,194586..194657,194733..194973,195583..195680,195767..195879,196729..196840,197424..197519,197590..197675,199278..199381,200296..200403,201151..201279,202320..202461,203569..203647)
location: region:193492-203647:1
so has part: feature:193492-193581:1:exon
so has part: feature:194586-194657:1:exon
so has part: feature:194733-194973:1:exon
so has part: feature:195583-195680:1:exon
so has part: feature:195767-195879:1:exon
so has part: feature:196729-196840:1:exon
so has part: feature:197424-197519:1:exon
so has part: feature:197590-197675:1:exon
so has part: feature:199278-199381:1:exon
so has part: feature:200296-200403:1:exon
so has part: feature:201151-201279:1:exon
so has part: feature:202320-202461:1:exon
so has part: feature:203569-203647:1:exon

XP_041568308.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:193492-193581:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:194586-194657:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:194733-194973:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:195583-195680:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:195767-195879:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:196729-196840:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:197424-197519:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:197590-197675:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:199278-199381:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:200296-200403:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:201151-201279:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:202320-202461:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:203569-203647:1:exon

SMG9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: SMG9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein SMG9 isoform X5
translation: MSDSGQSPAPGARRRCWTREKETEGGGERREQGEEPAGPLQKTPIILAKPPAERAGPAQAPPPPAPAPPIVLMKARGEDGRGGGGASAAPGEGPQQAPPTEREGPRPTQPVYQLHSRGLAPPAALDPAQAQARLAAPEKMKTSIKLVDEQMNWCDSALEFLLEQTDVLVVGALGLQGTGKSTVMSLLAGNQPEEDPRSFVFRPQPPELRERGGAQTGGIDLFVTQERVLFLDTQPILSPAHLDHLINNDRKLPPEFALPHAYVETQSLQIAAFLFTVCHVVLLVQDWFTDLGLYRFLQTAEMVKPPTPSPSHDSSGAGAEEPSEYYPHLVFVQTRAPPECFSPRRVGQMQRVLGRLMAHSRLKYRGSLSMRELLPSPPGAPPGPPPEPEVNLFLLPPLEEEPEDALPRGGGGALFPALPPFRGRGGLGGLLARLRGRVLAAARSQLSHSLLTERNWFHYAARIWDGVKKSSALAEYGRLLG
SIO_010081: SMG9
subclass of: SO_0000673
so part of: SMG9
location: join(193492..193581,194586..194657,194757..194973,195583..195680,195767..195879,196729..196840,197424..197519,197590..197675,199278..199381,200296..200403,201151..201279,202320..202461,203569..203647)
location: region:193492-203647:1
so has part: feature:193492-193581:1:exon
so has part: feature:194586-194657:1:exon
so has part: feature:194757-194973:1:exon
so has part: feature:195583-195680:1:exon
so has part: feature:195767-195879:1:exon
so has part: feature:196729-196840:1:exon
so has part: feature:197424-197519:1:exon
so has part: feature:197590-197675:1:exon
so has part: feature:199278-199381:1:exon
so has part: feature:200296-200403:1:exon
so has part: feature:201151-201279:1:exon
so has part: feature:202320-202461:1:exon
so has part: feature:203569-203647:1:exon

XP_041568311.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:193492-193581:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:194586-194657:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:194757-194973:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:195583-195680:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:195767-195879:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:196729-196840:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:197424-197519:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:197590-197675:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:199278-199381:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:200296-200403:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:201151-201279:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:202320-202461:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:203569-203647:1:exon

SMG9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: SMG9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein SMG9 isoform X4
translation: MSDSGQSPAPGARRRCWTREKETEEQGEEPAGPLQKTPIILAKPPAERQQPPPAAPKAGPAQAPPPPAPAPPIVLMKARGEDGRGGGGASAAPGEGPQQAPPTEREGPRPTQPVYQLHSRGLAPPAALDPAQAQARLAAPEKMKTSIKLVDEQMNWCDSALEFLLEQTDVLVVGALGLQGTGKSTVMSLLAGNQPEEDPRSFVFRPQPPELRERGGAQTGGIDLFVTQERVLFLDTQPILSPAHLDHLINNDRKLPPEFALPHAYVETQSLQIAAFLFTVCHVVLLVQDWFTDLGLYRFLQTAEMVKPPTPSPSHDSSGAGAEEPSEYYPHLVFVQTRAPPECFSPRRVGQMQRVLGRLMAHSRLKYRGSLSMRELLPSPPGAPPGPPPEPEVNLFLLPPLEEEPEDALPRGGGGALFPALPPFRGRGGLGGLLARLRGRVLAAARSQLSHSLLTERNWFHYAARIWDGVKKSSALAEYGRLLG
SIO_010081: SMG9
subclass of: SO_0000673
so part of: SMG9
location: join(193492..193563,194586..194657,194730..194973,195583..195680,195767..195879,196729..196840,197424..197519,197590..197675,199278..199381,200296..200403,201151..201279,202320..202461,203569..203647)
location: region:193492-203647:1
so has part: feature:193492-193563:1:exon
so has part: feature:194586-194657:1:exon
so has part: feature:194730-194973:1:exon
so has part: feature:195583-195680:1:exon
so has part: feature:195767-195879:1:exon
so has part: feature:196729-196840:1:exon
so has part: feature:197424-197519:1:exon
so has part: feature:197590-197675:1:exon
so has part: feature:199278-199381:1:exon
so has part: feature:200296-200403:1:exon
so has part: feature:201151-201279:1:exon
so has part: feature:202320-202461:1:exon
so has part: feature:203569-203647:1:exon

XP_041568310.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:193492-193563:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:194586-194657:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:194730-194973:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:195583-195680:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:195767-195879:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:196729-196840:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:197424-197519:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:197590-197675:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:199278-199381:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:200296-200403:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:201151-201279:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:202320-202461:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:203569-203647:1:exon

LOC115492926
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC115492926
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 205661..214393
location: region:205661-214393:1
so has part: feature:205661-214393:1:exon
subclass of: SO_0000010

115492926
type: Gene
SIO_000068: ncbigene

position:205661:1
position: 205661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:214393:1
position: 214393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:205661-214393:1:exon

LOC115492926
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC115492926
product: pleckstrin homology-like domain family B member 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_041712379.1
SIO_010081: LOC115492926
subclass of: SO_0000673
so part of: LOC115492926
location: join(205661..205875,206552..207006,208705..208743,209048..209167,209879..209977,211031..211136,211594..211630,212450..212537,212752..212868,213423..213600,213927..214012,214126..214393)
location: region:205661-214393:1
so has part: feature:205661-205875:1:exon
so has part: feature:206552-207006:1:exon
so has part: feature:208705-208743:1:exon
so has part: feature:209048-209167:1:exon
so has part: feature:209879-209977:1:exon
so has part: feature:211031-211136:1:exon
so has part: feature:211594-211630:1:exon
so has part: feature:212450-212537:1:exon
so has part: feature:212752-212868:1:exon
so has part: feature:213423-213600:1:exon
so has part: feature:213927-214012:1:exon
so has part: feature:214126-214393:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:205661-205875:1:exon

position:205875:1
position: 205875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:206552-207006:1:exon

position:206552:1
position: 206552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:207006:1
position: 207006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:208705-208743:1:exon

position:208705:1
position: 208705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:208743:1
position: 208743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:209048-209167:1:exon

position:209048:1
position: 209048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:209167:1
position: 209167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:209879-209977:1:exon

position:209879:1
position: 209879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:209977:1
position: 209977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:211031-211136:1:exon

position:211031:1
position: 211031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:211136:1
position: 211136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:211594-211630:1:exon

position:211594:1
position: 211594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:211630:1
position: 211630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:212450-212537:1:exon

position:212450:1
position: 212450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:212537:1
position: 212537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:212752-212868:1:exon

position:212752:1
position: 212752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:212868:1
position: 212868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:213423-213600:1:exon

position:213423:1
position: 213423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:213600:1
position: 213600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:213927-214012:1:exon

position:213927:1
position: 213927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:214012:1
position: 214012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:214126-214393:1:exon

position:214126:1
position: 214126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115492926
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC115492926
product: pleckstrin homology-like domain family B member 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_041712380.1
SIO_010081: LOC115492926
subclass of: SO_0000673
so part of: LOC115492926
location: join(205661..205875,206552..207006,208705..208743,209048..209167,209879..209977,211031..211136,211594..211630,212459..212537,212752..212868,213423..213600,213927..214012,214126..214393)
location: region:205661-214393:1
so has part: feature:205661-205875:1:exon
so has part: feature:206552-207006:1:exon
so has part: feature:208705-208743:1:exon
so has part: feature:209048-209167:1:exon
so has part: feature:209879-209977:1:exon
so has part: feature:211031-211136:1:exon
so has part: feature:211594-211630:1:exon
so has part: feature:212459-212537:1:exon
so has part: feature:212752-212868:1:exon
so has part: feature:213423-213600:1:exon
so has part: feature:213927-214012:1:exon
so has part: feature:214126-214393:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:205661-205875:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:206552-207006:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:208705-208743:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:209048-209167:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:209879-209977:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:211031-211136:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:211594-211630:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:212459-212537:1:exon

position:212459:1
position: 212459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:212752-212868:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:213423-213600:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:213927-214012:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:214126-214393:1:exon

LOC115492926
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC115492926
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pleckstrin homology-like domain family B member 3 isoform X1
translation: MVHRGGGETPPSDGDDPAAALEGLRLEDEPPPKEGGGAAVTSEAMTSSQAMTSQAMTSEAAVTAGGQPQLMFSHCTDRRWILLGPPCDPPRVLALRSSVRGAIGLQRSGSLPRRRGGEGPGPPQPPLPPRPRSQHGALALQLDPEAYSLPSTCLQLAQLELRVREALAERERLLRAREARKAAKAPPTKDTPISDEVTTSPAQATPSPDQATPPHEPDLLCALRARGHRPEAVGGLRILGGSLRGPLTKMGGRIKTWRRRWFHLDPQRRVLAYYGDQAQTKLKGVIYFQAIEEVWYDPGRVAGKSPNPRLTFCLKTYERLFWLVAPSAEALRIWMDAVLTLTRGSGAF
SIO_010081: LOC115492926
subclass of: SO_0000673
so part of: LOC115492926
location: join(206965..207006,208705..208743,209048..209167,209879..209977,211031..211136,211594..211630,212450..212537,212752..212868,213423..213600,213927..214012,214126..214260)
location: region:206965-214260:1
so has part: feature:206965-207006:1:exon
so has part: feature:208705-208743:1:exon
so has part: feature:209048-209167:1:exon
so has part: feature:209879-209977:1:exon
so has part: feature:211031-211136:1:exon
so has part: feature:211594-211630:1:exon
so has part: feature:212450-212537:1:exon
so has part: feature:212752-212868:1:exon
so has part: feature:213423-213600:1:exon
so has part: feature:213927-214012:1:exon
so has part: feature:214126-214260:1:exon

XP_041568313.1
type: Protein
SIO_000068: ncbiprotein

position:206965:1
position: 206965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:214260:1
position: 214260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:206965-207006:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:208705-208743:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:209048-209167:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:209879-209977:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:211031-211136:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:211594-211630:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:212450-212537:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:212752-212868:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:213423-213600:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:213927-214012:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:214126-214260:1:exon

LOC115492926
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC115492926
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pleckstrin homology-like domain family B member 3 isoform X2
translation: MVHRGGGETPPSDGDDPAAALEGLRLEDEPPPKEGGGAAVTSEAMTSSQAMTSQAMTSEAAVTAGGQPQLMFSHCTDRRWILLGPPCDPPRVLALRSSVRGAIGLQRSGSLPRRRGGEGPGPPQPPLPPRPRSQHGALALQLDPEAYSTCLQLAQLELRVREALAERERLLRAREARKAAKAPPTKDTPISDEVTTSPAQATPSPDQATPPHEPDLLCALRARGHRPEAVGGLRILGGSLRGPLTKMGGRIKTWRRRWFHLDPQRRVLAYYGDQAQTKLKGVIYFQAIEEVWYDPGRVAGKSPNPRLTFCLKTYERLFWLVAPSAEALRIWMDAVLTLTRGSGAF
SIO_010081: LOC115492926
subclass of: SO_0000673
so part of: LOC115492926
location: join(206965..207006,208705..208743,209048..209167,209879..209977,211031..211136,211594..211630,212459..212537,212752..212868,213423..213600,213927..214012,214126..214260)
location: region:206965-214260:1
so has part: feature:206965-207006:1:exon
so has part: feature:208705-208743:1:exon
so has part: feature:209048-209167:1:exon
so has part: feature:209879-209977:1:exon
so has part: feature:211031-211136:1:exon
so has part: feature:211594-211630:1:exon
so has part: feature:212459-212537:1:exon
so has part: feature:212752-212868:1:exon
so has part: feature:213423-213600:1:exon
so has part: feature:213927-214012:1:exon
so has part: feature:214126-214260:1:exon

XP_041568314.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:206965-207006:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:208705-208743:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:209048-209167:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:209879-209977:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:211031-211136:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:211594-211630:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:212459-212537:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:212752-212868:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:213423-213600:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:213927-214012:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:214126-214260:1:exon

LOC121468575
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121468575
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(216129..220831)
location: region:216129-220831:-1
so has part: feature:216129-220831:-1:exon
subclass of: SO_0000010

121468575
type: Gene
SIO_000068: ncbigene

position:216129:-1
position: 216129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:220831:-1
position: 220831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:216129-220831:-1:exon

LOC121468575
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC121468575
product: ly6/PLAUR domain-containing protein 3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_041712378.1
SIO_010081: LOC121468575
subclass of: SO_0000673
so part of: LOC121468575
location: complement(join(216129..216957,217065..217202,217677..217850,218406..218570,220659..220831))
location: region:216129-220831:-1
so has part: feature:220659-220831:-1:exon
so has part: feature:218406-218570:-1:exon
so has part: feature:217677-217850:-1:exon
so has part: feature:217065-217202:-1:exon
so has part: feature:216129-216957:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:220659-220831:-1:exon

position:220659:-1
position: 220659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:218406-218570:-1:exon

position:218406:-1
position: 218406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:218570:-1
position: 218570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:217677-217850:-1:exon

position:217677:-1
position: 217677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:217850:-1
position: 217850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:217065-217202:-1:exon

position:217065:-1
position: 217065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:217202:-1
position: 217202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:216129-216957:-1:exon

position:216957:-1
position: 216957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121468575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC121468575
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ly6/PLAUR domain-containing protein 3-like
translation: MWGRAMGGARLLLLLLLLPGCRALRCLSCGEDGAGRCRDVTNGTHDVTDDVTDDVTAVSCPGDVCGEAQAAVAWSHGQFSLSWRGCGRGQPGSLARALQLPGLVAFVRRRNCQGEACNDQLTTAGHGALALTANATDPSPNGLRCYGCPEAGPCPPTAIVHCYGDLRACFHGNVTLRAGNVTLWREIRGCVPDGDCGPERRGDDAASLSGSCCRGDLCNGKMADQSLFAPDLPRLELLPHGHAPTAAPGNATADGGGRNGTRGKMAAAGGGGGGNMAAGDHTAAGDAKTAAPRKDTATSGKRAASGKMAAGGKMVTRDKMGDGDKMADRDKMADGDKMADRNKMDDGDKMADRDKMADGDKMVDGDKMAAGGKMADGDKMAERDKMAERDKMAAGDKMATGHMAPRRPMGHNDGIKGPVGRGQSLGGPGWLLPFLLWPLLR
SIO_010081: LOC121468575
subclass of: SO_0000673
so part of: LOC121468575
location: complement(join(216167..216957,217065..217202,217677..217850,218406..218570,220659..220716))
location: region:216167-220716:-1
so has part: feature:220659-220716:-1:exon
so has part: feature:218406-218570:-1:exon
so has part: feature:217677-217850:-1:exon
so has part: feature:217065-217202:-1:exon
so has part: feature:216167-216957:-1:exon

XP_041568312.1
type: Protein
SIO_000068: ncbiprotein

position:216167:-1
position: 216167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:220716:-1
position: 220716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:220659-220716:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:218406-218570:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:217677-217850:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:217065-217202:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:216167-216957:-1:exon

LOC121468574
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121468574
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(221617..224436)
location: region:221617-224436:-1
so has part: feature:221617-224436:-1:exon
subclass of: SO_0000010

121468574
type: Gene
SIO_000068: ncbigene

position:221617:-1
position: 221617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:224436:-1
position: 224436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:221617-224436:-1:exon

LOC121468574
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC121468574
product: mucin-1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_041712370.1
SIO_010081: LOC121468574
subclass of: SO_0000673
so part of: LOC121468574
location: complement(join(221617..223988,224301..224436))
location: region:221617-224436:-1
so has part: feature:224301-224436:-1:exon
so has part: feature:221617-223988:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:224301-224436:-1:exon

position:224301:-1
position: 224301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:221617-223988:-1:exon

position:223988:-1
position: 223988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121468574
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC121468574
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mucin-1-like
translation: MVATVTTSPGSDKILVATQGDIEVEGTEDPGATGDPRDSSGHVTEAYGDATTTMASVPVSSGGDKVLVATSGDVAMGGTEDPSVTDDPRDALGRVSEAYADATTMVATVTTSPGGDKVLVATSGDVTMEVTATPEATGDPRDTLGHLSDVTGDATTTAASVPVSPGGDKALVATSADVAMEGTEDPSATGDPRGALRCVTEAYGDATTTMATVTTSPGSDKMLVAPGEDVAMEGTAQPGATNCSWDTLGRVPEVPGDATTTVASVPVSPGGDKALLATSGDIAVEGTEDPSATGDPRDTLGFITEAYGDATTVVAPVSTSPGSDKVLVATSGDVAMEGTAQTNITSDPRDTLGHVTEAYGDATTTMASVPVSPGDDKALVATSGDVAMEGTAQPDVTSDPRDTLGHVTEAYADATTVVAPVSTSPGSDKMLVAPGEDVAMEGTAQPGATNCSWDTLGRVPEVPGDATTTVASVPVSPGCDKALEATSGDVAMEVTEDPSVTSGLGDTLGHVTEAYGDATITMAPLTTSSGGDKVLVATSGDIAVEGTEDPGATGDPRDSSGHVTEAYGDATTTMASVPVSSGGDKFLVATTGDVTMEGTAQPEATGDPRDTLGRVSEAYGDATTMVATVTVSPGGDKAPVATSADVAMEVTAPPGATNTSGDPLGRAPDVPPGATTPVPNAIMVAPGGDVAVGGPAPPPPCHAHSFPVTAAAPPPPGPPGLSGSAPSSSPLPLLLLLLLPLPLLLP
SIO_010081: LOC121468574
subclass of: SO_0000673
so part of: LOC121468574
location: complement(221684..223924)
location: region:221684-223924:-1
so has part: feature:221684-223924:-1:exon

XP_041568304.1
type: Protein
SIO_000068: ncbiprotein

position:221684:-1
position: 221684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:223924:-1
position: 223924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:221684-223924:-1:exon

LOC121468577
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121468577
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 227171..229136
location: region:227171-229136:1
so has part: feature:227171-229136:1:exon
subclass of: SO_0000010

121468577
type: Gene
SIO_000068: ncbigene

position:227171:1
position: 227171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:229136:1
position: 229136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:227171-229136:1:exon

LOC121468577
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC121468577
product: zinc finger protein 526-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_041712384.1
SIO_010081: LOC121468577
subclass of: SO_0000673
so part of: LOC121468577
location: join(227171..227239,227766..227958,228051..228170,228359..229136)
location: region:227171-229136:1
so has part: feature:227171-227239:1:exon
so has part: feature:227766-227958:1:exon
so has part: feature:228051-228170:1:exon
so has part: feature:228359-229136:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:227171-227239:1:exon

position:227239:1
position: 227239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:227766-227958:1:exon

position:227766:1
position: 227766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:227958:1
position: 227958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:228051-228170:1:exon

position:228051:1
position: 228051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:228170:1
position: 228170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:228359-229136:1:exon

position:228359:1
position: 228359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121468577
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC121468577
product: zinc finger protein 526-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_041712383.1
SIO_010081: LOC121468577
subclass of: SO_0000673
so part of: LOC121468577
location: join(227679..227958,228051..228170,228359..229136)
location: region:227679-229136:1
so has part: feature:227679-227958:1:exon
so has part: feature:228051-228170:1:exon
so has part: feature:228359-229136:1:exon

position:227679:1
position: 227679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:227679-227958:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:228051-228170:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:228359-229136:1:exon

LOC121468577
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC121468577
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 526-like isoform X1
translation: MTGWAGFVAQRQWRVSRGAAGVSQVNVGVSQVKVGVSPGRAAMMAAGRGPGQSGGSEDGAFEEEEEEEEEEEEEEEEEEEEEEEETAIAPPAPPEDDDDDDDDDEGSEATSVSSGDSGAPSPTANGCAGARPRPQGEEPRPFPEPPCGGGAAEPGGAASSGGGAGGGGGAGGGGGGGEWHRCPECGRAFGTSRALKVHRSYHVGRKRPQAGPLPHPSPPPPPPPLPHHPSPFKFHYICAECGLGFAAPGALGAHRCHRGRRRRRRSPPAPPPPPPPPPAPPPRAAAAAPPPPFRCTECAGAFGLVAELHEHYMRHARGQL
SIO_010081: LOC121468577
subclass of: SO_0000673
so part of: LOC121468577
location: join(227694..227958,228051..228170,228359..228936)
location: region:227694-228936:1
so has part: feature:227694-227958:1:exon
so has part: feature:228051-228170:1:exon
so has part: feature:228359-228936:1:exon

XP_041568317.1
type: Protein
SIO_000068: ncbiprotein

position:227694:1
position: 227694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:228936:1
position: 228936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:227694-227958:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:228051-228170:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:228359-228936:1:exon

LOC121468577
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC121468577
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 526-like isoform X2
translation: MMAAGRGPGQSGGSEDGAFEEEEEEEEEEEEEEEEEEEEEEEETAIAPPAPPEDDDDDDDDDEGSEATSVSSGDSGAPSPTANGCAGARPRPQGEEPRPFPEPPCGGGAAEPGGAASSGGGAGGGGGAGGGGGGGEWHRCPECGRAFGTSRALKVHRSYHVGRKRPQAGPLPHPSPPPPPPPLPHHPSPFKFHYICAECGLGFAAPGALGAHRCHRGRRRRRRSPPAPPPPPPPPPAPPPRAAAAAPPPPFRCTECAGAFGLVAELHEHYMRHARGQL
SIO_010081: LOC121468577
subclass of: SO_0000673
so part of: LOC121468577
location: join(227820..227958,228051..228170,228359..228936)
location: region:227820-228936:1
so has part: feature:227820-227958:1:exon
so has part: feature:228051-228170:1:exon
so has part: feature:228359-228936:1:exon

XP_041568318.1
type: Protein
SIO_000068: ncbiprotein

position:227820:1
position: 227820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:227820-227958:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:228051-228170:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:228359-228936:1:exon

LOC121468578
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121468578
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(229621..231688)
location: region:229621-231688:-1
so has part: feature:229621-231688:-1:exon
subclass of: SO_0000010

121468578
type: Gene
SIO_000068: ncbigene

position:229621:-1
position: 229621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:231688:-1
position: 231688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:229621-231688:-1:exon

LOC121468578
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC121468578
product: zinc finger protein 576-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 51 samples with support for all annotated introns
transcript id: XM_041712387.1
SIO_010081: LOC121468578
subclass of: SO_0000673
so part of: LOC121468578
location: complement(join(229621..230024,231166..231300,231519..231688))
location: region:229621-231688:-1
so has part: feature:231519-231688:-1:exon
so has part: feature:231166-231300:-1:exon
so has part: feature:229621-230024:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:231519-231688:-1:exon

position:231519:-1
position: 231519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:231166-231300:-1:exon

position:231166:-1
position: 231166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:231300:-1
position: 231300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:229621-230024:-1:exon

position:230024:-1
position: 230024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121468578
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC121468578
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 576-like
translation: MSQPPPPARPSPLPRREEEEEEEEEEEERGGGAPASPPGQEGFEYRPGSRRCGRCLITFPDAAFAARHAKRQHPRAFAAAALRGALFVCFVCGRAFASSPALLRHQRGHAPRRAPPPARAATPPAPQAPPPLSCTECGRSFAREGALHRHYIRHARGEL
SIO_010081: LOC121468578
subclass of: SO_0000673
so part of: LOC121468578
location: complement(join(229678..230024,231166..231298))
location: region:229678-231298:-1
so has part: feature:231166-231298:-1:exon
so has part: feature:229678-230024:-1:exon

XP_041568321.1
type: Protein
SIO_000068: ncbiprotein

position:229678:-1
position: 229678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:231298:-1
position: 231298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:231166-231298:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:229678-230024:-1:exon

CADM4
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: CADM4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(232749..247150)
location: region:232749-247150:-1
so has part: feature:232749-247150:-1:exon
subclass of: SO_0000010

121468576
type: Gene
SIO_000068: ncbigene

position:232749:-1
position: 232749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:247150:-1
position: 247150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:232749-247150:-1:exon

CADM4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: CADM4
product: cell adhesion molecule 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_041712382.1
SIO_010081: CADM4
subclass of: SO_0000673
so part of: CADM4
location: complement(join(232749..232958,233907..234035,234747..234919,236119..236209,237560..237724,238445..238579,239892..240044,240994..241140,244171..244282,246674..246881,247030..247150))
location: region:232749-247150:-1
so has part: feature:247030-247150:-1:exon
so has part: feature:246674-246881:-1:exon
so has part: feature:244171-244282:-1:exon
so has part: feature:240994-241140:-1:exon
so has part: feature:239892-240044:-1:exon
so has part: feature:238445-238579:-1:exon
so has part: feature:237560-237724:-1:exon
so has part: feature:236119-236209:-1:exon
so has part: feature:234747-234919:-1:exon
so has part: feature:233907-234035:-1:exon
so has part: feature:232749-232958:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:247030-247150:-1:exon

position:247030:-1
position: 247030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:246674-246881:-1:exon

position:246674:-1
position: 246674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:246881:-1
position: 246881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:244171-244282:-1:exon

position:244171:-1
position: 244171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:244282:-1
position: 244282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:240994-241140:-1:exon

position:240994:-1
position: 240994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:241140:-1
position: 241140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:239892-240044:-1:exon

position:239892:-1
position: 239892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:240044:-1
position: 240044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:238445-238579:-1:exon

position:238445:-1
position: 238445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:238579:-1
position: 238579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:237560-237724:-1:exon

position:237560:-1
position: 237560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:237724:-1
position: 237724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:236119-236209:-1:exon

position:236119:-1
position: 236119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:236209:-1
position: 236209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:234747-234919:-1:exon

position:234747:-1
position: 234747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:234919:-1
position: 234919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:233907-234035:-1:exon

position:233907:-1
position: 233907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:234035:-1
position: 234035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:232749-232958:-1:exon

position:232958:-1
position: 232958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CADM4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: CADM4
product: cell adhesion molecule 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 89 samples with support for all annotated introns
transcript id: XM_041712381.1
SIO_010081: CADM4
subclass of: SO_0000673
so part of: CADM4
location: complement(join(232749..232958,233907..234035,234747..234919,236119..236209,237560..237724,238445..238579,239892..240044,240847..240919))
location: region:232749-240919:-1
so has part: feature:240847-240919:-1:exon
so has part: feature:239892-240044:-1:exon
so has part: feature:238445-238579:-1:exon
so has part: feature:237560-237724:-1:exon
so has part: feature:236119-236209:-1:exon
so has part: feature:234747-234919:-1:exon
so has part: feature:233907-234035:-1:exon
so has part: feature:232749-232958:-1:exon

position:240919:-1
position: 240919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:240847-240919:-1:exon

position:240847:-1
position: 240847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:239892-240044:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:238445-238579:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:237560-237724:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:236119-236209:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:234747-234919:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:233907-234035:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:232749-232958:-1:exon

CADM4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: CADM4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cell adhesion molecule 4 isoform X2
translation: MQKLEVGRAAAAAAEARPPCSPPPRAPPALLPGLLLLWAAGHGRAQEVQAENVTVLEGGTAEITCHLHRYDGSIVVIQNPARQTLFFNGTRALKDERFELAEFSRRRLRLRLARARLDDEGGYFCQLYADDTHHQIATLTVLVPPEPPLVQAGALAVEGEELELTCLVPRARPPATLRWYRDRRELPGRSSHRQEGKVFWQRSVLRLRPERRDHGAVLTCEASHPALGRGQRRLTPFQLDVQYPPSARIHPSQSVLRQGDTLVLTCAVSGNPRPTEVSWSRGNESLPPRARAEGERLTLPALAPQDNGTYTCQVGNAHGRAADAYVLVVYDPGAVVAAQGAGPFAVVGGALALLVFLLLLLLGALLWCSVRQKGSYLTHEASGLEEHGEAREAFLGGEGAKRKEEFFI
SIO_010081: CADM4
subclass of: SO_0000673
so part of: CADM4
location: complement(join(232852..232958,233907..234035,234747..234919,236119..236209,237560..237724,238445..238579,239892..240044,240994..241140,244171..244282,246674..246688))
location: region:232852-246688:-1
so has part: feature:246674-246688:-1:exon
so has part: feature:244171-244282:-1:exon
so has part: feature:240994-241140:-1:exon
so has part: feature:239892-240044:-1:exon
so has part: feature:238445-238579:-1:exon
so has part: feature:237560-237724:-1:exon
so has part: feature:236119-236209:-1:exon
so has part: feature:234747-234919:-1:exon
so has part: feature:233907-234035:-1:exon
so has part: feature:232852-232958:-1:exon

XP_041568316.1
type: Protein
SIO_000068: ncbiprotein

position:232852:-1
position: 232852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:246688:-1
position: 246688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:246674-246688:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:244171-244282:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:240994-241140:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:239892-240044:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:238445-238579:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:237560-237724:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:236119-236209:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:234747-234919:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:233907-234035:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:232852-232958:-1:exon

CADM4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: CADM4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cell adhesion molecule 4 isoform X1
translation: MGLGTLNPARQTLFFNGTRALKDERFELAEFSRRRLRLRLARARLDDEGGYFCQLYADDTHHQIATLTVLVPPEPPLVQAGALAVEGEELELTCLVPRARPPATLRWYRDRRELPGRSSHRQEGKVFWQRSVLRLRPERRDHGAVLTCEASHPALGRGQRRLTPFQLDVQYPPSARIHPSQSVLRQGDTLVLTCAVSGNPRPTEVSWSRGNESLPPRARAEGERLTLPALAPQDNGTYTCQVGNAHGRAADAYVLVVYDPGAVVAAQGAGPFAVVGGALALLVFLLLLLLGALLWCSVRQKGSYLTHEASGLEEHGEAREAFLGGEGAKRKEEFFI
SIO_010081: CADM4
subclass of: SO_0000673
so part of: CADM4
location: complement(join(232852..232958,233907..234035,234747..234919,236119..236209,237560..237724,238445..238579,239892..240044,240847..240904))
location: region:232852-240904:-1
so has part: feature:240847-240904:-1:exon
so has part: feature:239892-240044:-1:exon
so has part: feature:238445-238579:-1:exon
so has part: feature:237560-237724:-1:exon
so has part: feature:236119-236209:-1:exon
so has part: feature:234747-234919:-1:exon
so has part: feature:233907-234035:-1:exon
so has part: feature:232852-232958:-1:exon

XP_041568315.1
type: Protein
SIO_000068: ncbiprotein

position:240904:-1
position: 240904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:240847-240904:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:239892-240044:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:238445-238579:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:237560-237724:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:236119-236209:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:234747-234919:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:233907-234035:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:232852-232958:-1:exon

RPS19
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: RPS19
note: ribosomal protein S19-like; Derived by automated computational analysis using gene prediction method: BestRefSeq,Gnomon.
so part of: sequence
location: complement(248114..251702)
location: region:248114-251702:-1
so has part: feature:248114-251702:-1:exon
subclass of: SO_0000010

100190667
type: Gene
SIO_000068: ncbigene

position:248114:-1
position: 248114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:251702:-1
position: 251702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:248114-251702:-1:exon

RPS19
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: RPS19
product: ribosomal protein S19
inference: similar to RNA sequence, mRNA (same species):RefSeq:NM_001245691.1
exception: annotated by transcript or proteomic data
note: The RefSeq transcript has 7 substitutions compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001245691.1
SIO_010081: RPS19
subclass of: SO_0000673
so part of: RPS19
location: complement(join(248114..248171,248311..248365,249974..250157,251118..251218,251456..251528,251634..251702))
location: region:248114-251702:-1
so has part: feature:251634-251702:-1:exon
so has part: feature:251456-251528:-1:exon
so has part: feature:251118-251218:-1:exon
so has part: feature:249974-250157:-1:exon
so has part: feature:248311-248365:-1:exon
so has part: feature:248114-248171:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:251634-251702:-1:exon

position:251634:-1
position: 251634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:251456-251528:-1:exon

position:251456:-1
position: 251456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:251528:-1
position: 251528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:251118-251218:-1:exon

position:251118:-1
position: 251118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:251218:-1
position: 251218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:249974-250157:-1:exon

position:249974:-1
position: 249974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:250157:-1
position: 250157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:248311-248365:-1:exon

position:248311:-1
position: 248311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:248365:-1
position: 248365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:248114-248171:-1:exon

position:248171:-1
position: 248171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RPS19
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: RPS19
product: ribosomal protein S19, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 53 ESTs, 1 long SRA read, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 89 samples with support for all annotated introns
transcript id: XM_041712357.1
SIO_010081: RPS19
subclass of: SO_0000673
so part of: RPS19
location: complement(join(248114..248171,248311..248365,249974..250157,251118..251218,251456..251526,251629..251697))
location: region:248114-251697:-1
so has part: feature:251629-251697:-1:exon
so has part: feature:251456-251526:-1:exon
so has part: feature:251118-251218:-1:exon
so has part: feature:249974-250157:-1:exon
so has part: feature:248311-248365:-1:exon
so has part: feature:248114-248171:-1:exon

position:251697:-1
position: 251697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:251629-251697:-1:exon

position:251629:-1
position: 251629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:251456-251526:-1:exon

position:251526:-1
position: 251526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:251118-251218:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:249974-250157:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:248311-248365:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:248114-248171:-1:exon

RPS19
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: RPS19
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 40S ribosomal protein S19 isoform X1
translation: MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPDWADTVKLAKHKELAPYDENWFYTRAASTARHLYLRGGAGVGSMAKVYGGRQRRGVRPSHFSRGSGAVARRVLQALEALKVVEKDQDGGRKLTPQGQRDLDRIAGQVAAASKKH
SIO_010081: RPS19
subclass of: SO_0000673
so part of: RPS19
location: complement(join(248145..248171,248311..248365,249974..250157,251118..251218,251456..251526))
location: region:248145-251526:-1
so has part: feature:251456-251526:-1:exon
so has part: feature:251118-251218:-1:exon
so has part: feature:249974-250157:-1:exon
so has part: feature:248311-248365:-1:exon
so has part: feature:248145-248171:-1:exon

XP_041568291.1
type: Protein
SIO_000068: ncbiprotein

position:248145:-1
position: 248145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:251456-251526:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:251118-251218:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:249974-250157:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:248311-248365:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:248145-248171:-1:exon

RPS19
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: RPS19
note: 40S ribosomal protein S19; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: putative ribosomal protein S19
translation: MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPDWADTVKLAKHKELAPYDENWFYTRAASTARHLYLRGGAGVGSMAKVYGGRQRRGVRPSHFSRGSGAVARRVLQALEALKVVEKDQDGGRKLTPQGQRDLDRIAGQVAAASKKH
SIO_010081: RPS19
subclass of: SO_0000673
so part of: RPS19
location: complement(join(248145..248171,248311..248365,249974..250157,251118..251218,251456..251526))
location: region:248145-251526:-1
so has part: feature:251456-251526:-1:exon
so has part: feature:251118-251218:-1:exon
so has part: feature:249974-250157:-1:exon
so has part: feature:248311-248365:-1:exon
so has part: feature:248145-248171:-1:exon

NP_001232620.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:251456-251526:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:251118-251218:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:249974-250157:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:248311-248365:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:248145-248171:-1:exon

CIC
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: CIC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(252739..274951)
location: region:252739-274951:-1
so has part: feature:252739-274951:-1:exon
subclass of: SO_0000010

115492924
type: Gene
SIO_000068: ncbigene

position:252739:-1
position: 252739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:274951:-1
position: 274951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:252739-274951:-1:exon

CIC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: CIC
product: capicua transcriptional repressor
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 90% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041712390.1
SIO_010081: CIC
subclass of: SO_0000673
so part of: CIC
location: complement(join(252739..253121,253971..254102,254952..255086,255175..255326,256160..256323,256410..256727,257012..257251,257726..257831,258000..258133,258737..258959,259194..259451,260229..260317,260387..260579,261728..261894,262852..263017,264086..264268,265244..265364,265882..266089,266839..266991,271401..273694,274829..274951))
location: region:252739-274951:-1
so has part: feature:274829-274951:-1:exon
so has part: feature:271401-273694:-1:exon
so has part: feature:266839-266991:-1:exon
so has part: feature:265882-266089:-1:exon
so has part: feature:265244-265364:-1:exon
so has part: feature:264086-264268:-1:exon
so has part: feature:262852-263017:-1:exon
so has part: feature:261728-261894:-1:exon
so has part: feature:260387-260579:-1:exon
so has part: feature:260229-260317:-1:exon
so has part: feature:259194-259451:-1:exon
so has part: feature:258737-258959:-1:exon
so has part: feature:258000-258133:-1:exon
so has part: feature:257726-257831:-1:exon
so has part: feature:257012-257251:-1:exon
so has part: feature:256410-256727:-1:exon
so has part: feature:256160-256323:-1:exon
so has part: feature:255175-255326:-1:exon
so has part: feature:254952-255086:-1:exon
so has part: feature:253971-254102:-1:exon
so has part: feature:252739-253121:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:274829-274951:-1:exon

position:274829:-1
position: 274829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:271401-273694:-1:exon

position:271401:-1
position: 271401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:273694:-1
position: 273694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:266839-266991:-1:exon

position:266839:-1
position: 266839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:266991:-1
position: 266991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:265882-266089:-1:exon

position:265882:-1
position: 265882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:266089:-1
position: 266089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:265244-265364:-1:exon

position:265244:-1
position: 265244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:265364:-1
position: 265364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:264086-264268:-1:exon

position:264086:-1
position: 264086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:264268:-1
position: 264268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:262852-263017:-1:exon

position:262852:-1
position: 262852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:263017:-1
position: 263017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:261728-261894:-1:exon

position:261728:-1
position: 261728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:261894:-1
position: 261894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:260387-260579:-1:exon

position:260387:-1
position: 260387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:260579:-1
position: 260579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:260229-260317:-1:exon

position:260229:-1
position: 260229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:260317:-1
position: 260317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:259194-259451:-1:exon

position:259194:-1
position: 259194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:259451:-1
position: 259451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:258737-258959:-1:exon

position:258737:-1
position: 258737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:258959:-1
position: 258959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:258000-258133:-1:exon

position:258000:-1
position: 258000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:258133:-1
position: 258133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:257726-257831:-1:exon

position:257726:-1
position: 257726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:257831:-1
position: 257831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:257012-257251:-1:exon

position:257012:-1
position: 257012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:257251:-1
position: 257251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:256410-256727:-1:exon

position:256410:-1
position: 256410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:256727:-1
position: 256727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:256160-256323:-1:exon

position:256160:-1
position: 256160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:256323:-1
position: 256323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:255175-255326:-1:exon

position:255175:-1
position: 255175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:255326:-1
position: 255326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:254952-255086:-1:exon

position:254952:-1
position: 254952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:255086:-1
position: 255086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:253971-254102:-1:exon

position:253971:-1
position: 253971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:254102:-1
position: 254102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:252739-253121:-1:exon

position:253121:-1
position: 253121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CIC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: CIC
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: protein capicua homolog
translation: MKPARKAGGSSSSSSSSSSSSSSSAPRAALPPPGRPKPPKPDEDSPSPLPPSSCSSPQPPPEDPPPPSRKTTTFKSRAPRKKPPPTPGEEPGDPLGYPEPSGGDPGGGSGCSSTDTASEHSADEGGGGGGGGGGGGGGGGGGGGAPAPLPIPATPGDPPELEAAFRRLRCQRVLARRDGVFRPAVVKQLRRGHELGVQFAGDRGVTFLEGGFLLGDPPAVVLDATPPAGALGVGTAVCARLDPAETLYRPGTVVEVSAKPPSYRVRFAPPPPAPPVWVPRSGLRLLRPPWPPHAHGDPTGTGAEDEEDEAAAAAGPRQAEDAEVSKLSAGPAPRPGAAAPTAGTPQNAAGGTPQPKYKKGDVVCTPNGIRKKFNGKQWRRLCSRDGCTKESQRRGFCSRHLSMRTKELEGLPESRGGPPGPPSQRGGSADFEWGDETSRESDGDGRARLGGAAPVPPNPDLSRFEFDECEAAVMLVSLGSSRSGTPSFSPASTQSPFSPTPSPSPSPLFGFRPANFSPVTASPRARGRHLSAGTPRPGEGLSPPPPPPPPPPPPPRPRPPSGVPPVFQPGLPFPVPLSPGKRKAEAAALAEPPEGGGGPVGTGGGMFRALSPLFAPRSPAGLTADPGPGARRVPAVPRGSPVIVRNPEVPLPDPPRPRPLPPPQKPTLAAPVPINAGRLRPPSRPPAAPPGPGGTERGGPAAPPAPTAAAFGGPPLHPVAFHPSPAALLPLLVPGDFGTPPAPRKEIVMGRPGTVWTNVEPRSVPVFPWHSLVPFLAPSQPDAAPHPPAGLQPVSHLPPAAAASKEPPESAAVAPEPGGPGQEPGRCGGATRPPSPPPAAPPAPPPAATAPPPEEEPPTGGARPDSENESDHDDAFLSSIVAPELPLPLAPGKRRTQSLSALPKEGDKDGRSPGKREKDHIRRPMNAFMIFSKRHRALVHQRHPNQDNRTVSKILGEWWYALGPREKQQYHDLAFQVKEAHFKAHPDWKWCNKDRKKSSSDGGRGPGGPGGVPKEPRERSASESGPPAPPPGAADPSPPEAKGGVPGGPGGGGGAAPPPPPRPRAFSHSGVGGGADPRAPPLHELSQLCSGPAPFGAAKAGGGGGAAPYAPLPPGRAPPPRAVPLPPRSAQSESDEERMVICEEEGDDDVIEDGFAPPPPEIDLKCKERVSDSESEGEGLQAPPRRLFPPAPPRPPRSWSPPRAPPSRPPPAPPPTRGPPPPPKNAPRAPPLPLPAGNGPRALRVGEGPGPPPPLPPPLQKPKSPPKPPPPNGPLPLGITQVQYILPTLPLPHGKGPAPGPAPSQGPAPGPAPSLHFALPPPQNGKAPPTTAGGAGGSAPKAQPSPPGQAPPPAPLLPGKVLVPVAPPGPALTPFGPPGAAPPPGKVLLPPARIAYVHPAPPPAPPPPVLGFTALGPGGGAGQGSLLGPAPVGVSALPPPQLPPPSSGGPVLAAIYPGGPGPAPGPAPAPGLVYSVAGSAPPAPPILPKAAPPPTPPWGLQPPCPSPPRPPRPPPKPPQKVKAALATIPVGGGDTPPRPPPPDPPPPPCPAPPAAASHPPPPPAPPRPHRRPSPALGPAPLPPQRRGLEPAGASGGGAAQPRPPRRGAERWAPPPEATPPAGPSSSSCSAPSPPAPPPAEGGAKKAKLRPPPLKKTFDSVDRVLSEVDFEERFAELPEFRPEEVLPSPTLQALATSPRTILGSYRKKRKNSAEPEPPGDDPSSPKRAKLRRRSSCGSEPTTPKSAKCEGEIFTFERPGGEGEDVLGELEYDKVPFSSLRRTLDQRRALVMQLFQEHGFFPSAQATAAFQARFADIFPTKLCLQLKIREVRQKIMQAATPTDPAPPTEPDGPAPSAEAPPPAAPPPAPSSCSDPAPSAEATPPSPPAGGGGAR
SIO_010081: CIC
subclass of: SO_0000673
so part of: CIC
location: complement(join(252847..253121,253971..254102,254952..255086,255175..255326,256160..256323,256410..256727,257012..257251,257726..257831,258000..258133,258737..258959,259194..259451,260229..260317,260387..260579,261728..261894,262852..263017,264086..264268,265244..265364,265882..266089,266839..266991,271401..273663))
location: region:252847-273663:-1
so has part: feature:271401-273663:-1:exon
so has part: feature:266839-266991:-1:exon
so has part: feature:265882-266089:-1:exon
so has part: feature:265244-265364:-1:exon
so has part: feature:264086-264268:-1:exon
so has part: feature:262852-263017:-1:exon
so has part: feature:261728-261894:-1:exon
so has part: feature:260387-260579:-1:exon
so has part: feature:260229-260317:-1:exon
so has part: feature:259194-259451:-1:exon
so has part: feature:258737-258959:-1:exon
so has part: feature:258000-258133:-1:exon
so has part: feature:257726-257831:-1:exon
so has part: feature:257012-257251:-1:exon
so has part: feature:256410-256727:-1:exon
so has part: feature:256160-256323:-1:exon
so has part: feature:255175-255326:-1:exon
so has part: feature:254952-255086:-1:exon
so has part: feature:253971-254102:-1:exon
so has part: feature:252847-253121:-1:exon

XP_041568324.1
type: Protein
SIO_000068: ncbiprotein

position:252847:-1
position: 252847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:273663:-1
position: 273663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:271401-273663:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:266839-266991:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:265882-266089:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:265244-265364:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:264086-264268:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:262852-263017:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:261728-261894:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:260387-260579:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:260229-260317:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:259194-259451:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:258737-258959:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:258000-258133:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:257726-257831:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:257012-257251:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:256410-256727:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:256160-256323:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:255175-255326:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:254952-255086:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:253971-254102:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:252847-253121:-1:exon

ERF
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: ERF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 275658..287494
location: region:275658-287494:1
so has part: feature:275658-287494:1:exon
subclass of: SO_0000010

115492923
type: Gene
SIO_000068: ncbigene

position:275658:1
position: 275658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:287494:1
position: 287494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:275658-287494:1:exon

ERF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: ERF
product: ETS2 repressor factor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041712391.1
SIO_010081: ERF
subclass of: SO_0000673
so part of: ERF
location: join(275658..275755,278826..279060,282512..282627,284378..284909,284965..285085,285167..287494)
location: region:275658-287494:1
so has part: feature:275658-275755:1:exon
so has part: feature:278826-279060:1:exon
so has part: feature:282512-282627:1:exon
so has part: feature:284378-284909:1:exon
so has part: feature:284965-285085:1:exon
so has part: feature:285167-287494:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:275658-275755:1:exon

position:275755:1
position: 275755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:278826-279060:1:exon

position:278826:1
position: 278826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:279060:1
position: 279060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:282512-282627:1:exon

position:282512:1
position: 282512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:282627:1
position: 282627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:284378-284909:1:exon

position:284378:1
position: 284378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:284909:1
position: 284909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:284965-285085:1:exon

position:284965:1
position: 284965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:285085:1
position: 285085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:285167-287494:1:exon

position:285167:1
position: 285167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ERF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: ERF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ETS domain-containing transcription factor ERF
translation: MKTPADAGFAFPEWAYKAESSPGSRQIQLWHFILELLRQERYREVIAWQGDYGEFVIKDPDEVARLWGVRKCKPHMNYDKLSRALRYYYNKRILHKTKGKRFTYKFNFNKLVLVNCPFIDLGLAGPPLPQSAPPLPTGGSHFRFPPLPGPSPPPPPPGGGGPPLLAPPPPPFPSPHRRLGSLSDGSEEPEEPPLPHPALPPPPPLTSAGGGGGGGGAGGFRPLPHHPHPPRLTPEGLFRLYPSPHEPPLSPFPPSPSPLGGGGGGPGGGGGAGLLPPPLSPALPLSPPQLGYAPSPTLSPLLGGGSHFSFSAEDLQRALAAQARSVLSYHLSPRAFLPCPPPLQPPPPGRRQRNPPAPPPPPSSSSSSSSSSSAGGGGGAAAEPLPHIKVEPEEEEEEALEVAALSEEEEEEEEEEDEEGEGEEDEVFAPPPRRPPPPRVPPKLRFKRRWREGGGAGGGAGTGPAAPPPARGGGGGADPQNLGAGGGGELQRATAQLSLEP
SIO_010081: ERF
subclass of: SO_0000673
so part of: ERF
location: join(275734..275755,278826..279060,282512..282627,284378..284909,284965..285085,285167..285646)
location: region:275734-285646:1
so has part: feature:275734-275755:1:exon
so has part: feature:278826-279060:1:exon
so has part: feature:282512-282627:1:exon
so has part: feature:284378-284909:1:exon
so has part: feature:284965-285085:1:exon
so has part: feature:285167-285646:1:exon

XP_041568325.1
type: Protein
SIO_000068: ncbiprotein

position:275734:1
position: 275734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:285646:1
position: 285646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:275734-275755:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:278826-279060:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:282512-282627:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:284378-284909:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:284965-285085:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:285167-285646:1:exon

DEDD2
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: DEDD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 289801..297758
location: region:289801-297758:1
so has part: feature:289801-297758:1:exon
subclass of: SO_0000010

115492922
type: Gene
SIO_000068: ncbigene

position:289801:1
position: 289801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:297758:1
position: 297758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:289801-297758:1:exon

DEDD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: DEDD2
product: death effector domain containing 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_041712392.1
SIO_010081: DEDD2
subclass of: SO_0000673
so part of: DEDD2
location: join(289801..289875,291884..292430,293367..293453,294282..294329,294366..294479,297310..297758)
location: region:289801-297758:1
so has part: feature:289801-289875:1:exon
so has part: feature:291884-292430:1:exon
so has part: feature:293367-293453:1:exon
so has part: feature:294282-294329:1:exon
so has part: feature:294366-294479:1:exon
so has part: feature:297310-297758:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:289801-289875:1:exon

position:289875:1
position: 289875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:291884-292430:1:exon

position:291884:1
position: 291884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:292430:1
position: 292430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:293367-293453:1:exon

position:293367:1
position: 293367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:293453:1
position: 293453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:294282-294329:1:exon

position:294282:1
position: 294282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:294329:1
position: 294329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:294366-294479:1:exon

position:294366:1
position: 294366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:294479:1
position: 294479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:297310-297758:1:exon

position:297310:1
position: 297310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DEDD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: DEDD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA-binding death effector domain-containing protein 2
translation: MRGAVEGARRIRAAEAVSPADCRPCPAATAPCPLSPLTVESLRALSQLHSPQGAGGGTEGHHGHPQGHPGAVPGRMWRRWAGWEEEECLEFYGMLSLHRLFEVLAAQLTPSDVAVLSFLLDEALGDADRDKGDKDGDTAVTPRRPRGRGDPRDGLELLLELERRGLCHEGDLGQLRQLLRLLARHDLLRCVTLKRPRPVSPERVPCVPAVGGTCPSPPQPRPERWETGSSSGSSSGKRKRSARNSRNSRNSRRTRRPRDPPQDPPQDPPQDPPEPPAKVTCDIRLRVRAEYCEHDRALRRGVASSRPRGPGRALDVFGQASGVLKARDLGSILCDIKFSELSYLEAFWGDYLSGALLEALKGVFLTEGLRRAVGREDVRLLVSVDQDDYEAGRRLLLQAQGGVGGAGGVGGTGGTGGMGGVGGTGRGGRG
SIO_010081: DEDD2
subclass of: SO_0000673
so part of: DEDD2
location: join(289828..289875,291884..292430,293367..293453,294282..294329,294366..294479,297310..297758)
location: region:289828-297758:1
so has part: feature:289828-289875:1:exon
so has part: feature:291884-292430:1:exon
so has part: feature:293367-293453:1:exon
so has part: feature:294282-294329:1:exon
so has part: feature:294366-294479:1:exon
so has part: feature:297310-297758:1:exon

XP_041568326.1
type: Protein
SIO_000068: ncbiprotein

position:289828:1
position: 289828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:289828-289875:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:291884-292430:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:293367-293453:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:294282-294329:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:294366-294479:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:297310-297758:1:exon

LOC121468580
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121468580
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 302474..308673
location: region:302474-308673:1
so has part: feature:302474-308673:1:exon
subclass of: SO_0000011

121468580
type: Gene
SIO_000068: ncbigene

position:302474:1
position: 302474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:308673:1
position: 308673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:302474-308673:1:exon

LOC121468580
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC121468580
product: uncharacterized LOC121468580, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XR_005978492.1
SIO_010081: LOC121468580
subclass of: SO_0000673
so part of: LOC121468580
location: join(302474..302550,305205..305248,308339..308395,308504..308538,308653..308673)
location: region:302474-308673:1
so has part: feature:302474-302550:1:exon
so has part: feature:305205-305248:1:exon
so has part: feature:308339-308395:1:exon
so has part: feature:308504-308538:1:exon
so has part: feature:308653-308673:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:302474-302550:1:exon

position:302550:1
position: 302550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:305205-305248:1:exon

position:305205:1
position: 305205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:305248:1
position: 305248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:308339-308395:1:exon

position:308339:1
position: 308339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:308395:1
position: 308395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:308504-308538:1:exon

position:308504:1
position: 308504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:308538:1
position: 308538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:308653-308673:1:exon

position:308653:1
position: 308653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121468580
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC121468580
product: uncharacterized LOC121468580, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XR_005978493.1
SIO_010081: LOC121468580
subclass of: SO_0000673
so part of: LOC121468580
location: join(305163..305248,308339..308395,308504..308538,308653..308673)
location: region:305163-308673:1
so has part: feature:305163-305248:1:exon
so has part: feature:308339-308395:1:exon
so has part: feature:308504-308538:1:exon
so has part: feature:308653-308673:1:exon

position:305163:1
position: 305163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:305163-305248:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:308339-308395:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:308504-308538:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:308653-308673:1:exon

POU2F2
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: POU2F2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <310155..321550
location: region:310155-321550:1
so has part: feature:310155-321550:1:exon
subclass of: SO_0000010

121468582
type: Gene
SIO_000068: ncbigene

position:310155:1
position: 310155
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:321550:1
position: 321550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:310155-321550:1:exon

POU2F2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: POU2F2
product: POU class 2 homeobox 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041712393.1
SIO_010081: POU2F2
subclass of: SO_0000673
so part of: POU2F2
location: join(<310155..310256,311606..311791,313300..313405,314523..314614,315800..315952,316561..316702,317690..317841,319089..319264,319298..319421,320312..320369,321501..321550)
location: region:310155-321550:1
so has part: feature:310155-310256:1:exon
so has part: feature:311606-311791:1:exon
so has part: feature:313300-313405:1:exon
so has part: feature:314523-314614:1:exon
so has part: feature:315800-315952:1:exon
so has part: feature:316561-316702:1:exon
so has part: feature:317690-317841:1:exon
so has part: feature:319089-319264:1:exon
so has part: feature:319298-319421:1:exon
so has part: feature:320312-320369:1:exon
so has part: feature:321501-321550:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:310155-310256:1:exon

position:310256:1
position: 310256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:311606-311791:1:exon

position:311606:1
position: 311606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:311791:1
position: 311791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:313300-313405:1:exon

position:313300:1
position: 313300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:313405:1
position: 313405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:314523-314614:1:exon

position:314523:1
position: 314523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:314614:1
position: 314614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:315800-315952:1:exon

position:315800:1
position: 315800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:315952:1
position: 315952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:316561-316702:1:exon

position:316561:1
position: 316561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:316702:1
position: 316702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:317690-317841:1:exon

position:317690:1
position: 317690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:317841:1
position: 317841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:319089-319264:1:exon

position:319089:1
position: 319089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:319264:1
position: 319264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:319298-319421:1:exon

position:319298:1
position: 319298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:319421:1
position: 319421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:320312-320369:1:exon

position:320312:1
position: 320312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:320369:1
position: 320369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:321501-321550:1:exon

position:321501:1
position: 321501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

POU2F2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: POU2F2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: POU domain, class 2, transcription factor 2
translation: SPEFAPNSQVTGTEPPPAPPPQAQLLLAGSQLAGLAAQLLAPQHLVAQAQLLAAAAAAAQLPQGPPGTPSGTPGTPGTPPGPPPLPLPGPIQLSPQEVQQLLQLQQLVLVPGPPLQPPAQFLLQPPAQQGPGLLPPPNLFQLPQHSPGGLLPNPPRGGLHAQPRPGVPESPGPPPKGPEPPPGPPEEPPSDLEELERFARAFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLETWLRDAESMSLDSALPSPPSLGPPSLGGFEGLPGRRRKKRTSIETNVRFALEKSFLANQKPTSEEILGMAEQLHMEKEVIRVWFCNRRQKEKRINPAGTPNPPGFAPNFGLSPPRNPNPNPAPNPPNFTPNPAPNPPNFTPNPPGGAAKAGALGAHGVTPPGPALGLPPPGSLSTTDPTDMTPVTPMTPLTP
SIO_010081: POU2F2
subclass of: SO_0000673
so part of: POU2F2
location: join(<310155..310256,311606..311791,313300..313405,314523..314614,315800..315952,316561..316702,317690..317841,319089..319264,319298..319421,320312..320369,321501..321550)
location: region:310155-321550:1
so has part: feature:310155-310256:1:exon
so has part: feature:311606-311791:1:exon
so has part: feature:313300-313405:1:exon
so has part: feature:314523-314614:1:exon
so has part: feature:315800-315952:1:exon
so has part: feature:316561-316702:1:exon
so has part: feature:317690-317841:1:exon
so has part: feature:319089-319264:1:exon
so has part: feature:319298-319421:1:exon
so has part: feature:320312-320369:1:exon
so has part: feature:321501-321550:1:exon

XP_041568327.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:310155-310256:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:311606-311791:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:313300-313405:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:314523-314614:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:315800-315952:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:316561-316702:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:317690-317841:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:319089-319264:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:319298-319421:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:320312-320369:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:321501-321550:1:exon

ZNF574
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: ZNF574
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 328864..335438
location: region:328864-335438:1
so has part: feature:328864-335438:1:exon
subclass of: SO_0000010

121468583
type: Gene
SIO_000068: ncbigene

position:328864:1
position: 328864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:335438:1
position: 335438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:328864-335438:1:exon

ZNF574
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: ZNF574
product: zinc finger protein 574
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 4 Proteins, and 56% coverage of the annotated genomic feature by RNAseq alignments, including 68 samples with support for all annotated introns
transcript id: XM_041712394.1
SIO_010081: ZNF574
subclass of: SO_0000673
so part of: ZNF574
location: join(328864..328982,330327..332168,333294..335438)
location: region:328864-335438:1
so has part: feature:328864-328982:1:exon
so has part: feature:330327-332168:1:exon
so has part: feature:333294-335438:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:328864-328982:1:exon

position:328982:1
position: 328982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:330327-332168:1:exon

position:330327:1
position: 330327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:332168:1
position: 332168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:333294-335438:1:exon

position:333294:1
position: 333294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ZNF574
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: ZNF574
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 574
translation: MAAGDVTAGAGPRPESASGAEMSSAPEETLLLLEHRYVCSECSHQSPSLEEALLHQEQHLSAAGTSGTAPAPPAAPAPRAAPLELLEPPSHFQCLECGALLLTPGQLLEHQELHLKLLSAPDPAPPPPKPAPGSIHFECPECRALFQSQELWLAHRQSHRPAAGAAPGTARVALEHSYRKHGAGGAAEAPGEVQLLLYECGECLQLFQSPKDFLEHQVGHLAPPGQPVPPSAPAAPPEPRCQHCRELLPSARLLRAHLRCHALGAFQCPLCPRVLPDPAELRRHRAGHARDALYLCLECGSALDTEAALLAHRRGHGAEPLHRCACGKAFASMTKFLYHRRSHAAPGPPAPPEPPPEEPPERGVACGACPKSFPSAAALARHQRFVHRLERRHRCGACGKSFKKSSHLRNHARTHTGERPFPCRQCGKRFGSRANLLRHQLTHTGERPHECPQCHKRFAQNSTLRQHLQVHLRRFPHRCADCGLRFHRPHRLRLHRARHAGAFPYQCGRCGRGFLLRRLLDVHLQGHAGRPPQRCQGCGAAFAGAAALREHRCGNGGWRFECGVCGRKCGSAARLRAHEAAHGQPVGAEDPAVTVPVPVPVPEAEAEARPAPRRAAKNLECSECKKTFSTETSLQVHRRIHTGERPYPCPECGKAFRQSTHLKDHRRLHSGERPFGCAECGKRFALAVRLAEHRRTHTGERPYGCAACGKAYRSFSNLWKHRKSHRGHGGGGGGGTGQRGGGEGGSGAAGDGGNVGVQSGSSIHGENVVVGSGAPGEVLVMGSGAAVHGENSGVGSAVHGENLVGVPQPPKEPLVVGTGSSIHGENLGVQPGAPREVLVVGPGSAGCGESLGVGSGTSGEVLVMGSGSPSGVLVVGTGSAIHGENLGVGSGVPGDVVVVGSGSAIHGENVGVGSGAPGKVLVVGSGSSIHGGNAGVGSGSSGEVLVVGPGSSIHGESLGVQPGTHGEVLVVGSGSAIHGENIGMGSSVHGENIGVGSGAPGEVLVVGSGAAVHGENIGVGSGSSIHGGNVGVQPGAPSEVLVVGTGSLVHGENLGVQPGAPGEVLVVGSGAAVHGENLVEIPQGPKETLVVGTGSLVHGENLGVQPGAPSEVLVVGSGSLVHGENLGVGASVRGENLGVGSGTSGEVLVVGTGPTIHGESLGVGSGSSVHGENLGVGSGAPGEVLVVGSGSSVHGENLVGVSEPPKESLVMGLGTSVHGENLGVGSGSSSEVLVMGSGSSVHGENVGVGSGAPGEVLVVGSGSAGCGESLGVGLGTSGEVLVVGSGSSIHGENIGVGSGAPGEVVVVGTGSAVHGETPAAISAPQTPGDPPRDPQNPEETPEMVPAPTT
SIO_010081: ZNF574
subclass of: SO_0000673
so part of: ZNF574
location: join(328920..328982,330327..332168,333294..335438)
location: region:328920-335438:1
so has part: feature:328920-328982:1:exon
so has part: feature:330327-332168:1:exon
so has part: feature:333294-335438:1:exon

XP_041568328.1
type: Protein
SIO_000068: ncbiprotein

position:328920:1
position: 328920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:328920-328982:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:330327-332168:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:333294-335438:1:exon

GRIK5
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: GRIK5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 336350..358883
location: region:336350-358883:1
so has part: feature:336350-358883:1:exon
subclass of: SO_0000010

121468579
type: Gene
SIO_000068: ncbigene

position:336350:1
position: 336350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:358883:1
position: 358883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:336350-358883:1:exon

GRIK5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: GRIK5
product: glutamate ionotropic receptor kainate type subunit 5
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 102 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_041712389.1
SIO_010081: GRIK5
subclass of: SO_0000673
so part of: GRIK5
location: join(336350..336576,339668..339809,340510..340674,341485..341582,342628..342793,343562..343740,344221..344274,344857..345018,346089..346241,347452..347556,348475..348582,349555..349749,351579..351692,353147..353256,354341..354514,355864..356029,356646..356871,356990..357118,357755..357876,358341..358883)
location: region:336350-358883:1
so has part: feature:336350-336576:1:exon
so has part: feature:339668-339809:1:exon
so has part: feature:340510-340674:1:exon
so has part: feature:341485-341582:1:exon
so has part: feature:342628-342793:1:exon
so has part: feature:343562-343740:1:exon
so has part: feature:344221-344274:1:exon
so has part: feature:344857-345018:1:exon
so has part: feature:346089-346241:1:exon
so has part: feature:347452-347556:1:exon
so has part: feature:348475-348582:1:exon
so has part: feature:349555-349749:1:exon
so has part: feature:351579-351692:1:exon
so has part: feature:353147-353256:1:exon
so has part: feature:354341-354514:1:exon
so has part: feature:355864-356029:1:exon
so has part: feature:356646-356871:1:exon
so has part: feature:356990-357118:1:exon
so has part: feature:357755-357876:1:exon
so has part: feature:358341-358883:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:336350-336576:1:exon

position:336576:1
position: 336576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:339668-339809:1:exon

position:339668:1
position: 339668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:339809:1
position: 339809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:340510-340674:1:exon

position:340510:1
position: 340510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:340674:1
position: 340674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:341485-341582:1:exon

position:341485:1
position: 341485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:341582:1
position: 341582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:342628-342793:1:exon

position:342628:1
position: 342628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:342793:1
position: 342793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:343562-343740:1:exon

position:343562:1
position: 343562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:343740:1
position: 343740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:344221-344274:1:exon

position:344221:1
position: 344221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:344274:1
position: 344274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:344857-345018:1:exon

position:344857:1
position: 344857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:345018:1
position: 345018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:346089-346241:1:exon

position:346089:1
position: 346089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:346241:1
position: 346241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:347452-347556:1:exon

position:347452:1
position: 347452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:347556:1
position: 347556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:348475-348582:1:exon

position:348475:1
position: 348475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:348582:1
position: 348582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:349555-349749:1:exon

position:349555:1
position: 349555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:349749:1
position: 349749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:351579-351692:1:exon

position:351579:1
position: 351579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:351692:1
position: 351692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:353147-353256:1:exon

position:353147:1
position: 353147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:353256:1
position: 353256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:354341-354514:1:exon

position:354341:1
position: 354341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:354514:1
position: 354514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:355864-356029:1:exon

position:355864:1
position: 355864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:356029:1
position: 356029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:356646-356871:1:exon

position:356646:1
position: 356646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:356871:1
position: 356871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:356990-357118:1:exon

position:356990:1
position: 356990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:357118:1
position: 357118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:357755-357876:1:exon

position:357755:1
position: 357755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:357876:1
position: 357876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:358341-358883:1:exon

position:358341:1
position: 358341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GRIK5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: GRIK5
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: glutamate receptor ionotropic, kainate 5
translation: MPRPAPPALPLLLLLLVAARGSPRGAAGAALRMAAILDERGGCGRGERLALALARERLNGPGGGRPPARLELEVFELARDSQYETTDTMCQILPKGVVSVLGPAASPAAAATVSHICGEKEIPHIRVGPEEAPRPPLLRLAALSLYPSNEDVSRALGGLLRSLRAPPASLICARPECLLRLEELVRQFLISRESLSVRVLDAEQDPTPLLKEIRDDKVPTIVIDGSAATAALVLAKASELGMTSAFYKYILTTMDFPLLRLDALPAAPATVLGFSMFNTSHRFYPEFVRSLNMSWRESCELGPYPGPALSAALLFDAVHVVVGAVRELNRSQEIGGRPLACAAPGIWPHGTSLMNYLRMVEYDGLTGRVEFNSKGQRTNYSLRVLEKGRDGHREVGVWFSNRTLAMDEATLALNASDSLANKTLIITTILENPYVMRVGGAGGPERYEGFCVDMLRELAALLKFRFHIKLVEDGLYGAPEPNGSWTGMVGELINRKADLAVAAFTITAEREKVIDFSKPFMTLGISILYRVHMGRKPGYFSFLDPFSPAVWLFMLLAYLAVSCVLFLAARLSPYEWYNPHPCARERPGLLQNQYTLGNSLWFPVGGFLQQGAEVLPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPVESADDLADQTNIEYGTIHAGSTMTFFQNSRYQTYQRMWNYMHSKQPSVFVKSTEEGIARVLNSKYAFLLESTMNEYHRRHNCNLTQIGGLLDTKGYGIGMPLGSPFRDEITLAILQLQENNRLEILKRKWWEGGHCPKEEDHRAKGLGMENIGGIFVVLVCGLVVAILVAVMEFVWSTRRSAETEEISLCAEMLRELRRALSCSRRPRPRRRRRPHPIRGAGGWGGGPRRRPPPPKPPKSPPPPRRAGDALQQREALLGAGGGGAPPDRAGGWGRGGGGGRPSPPLWRRPSPPCAHVRVCPECRRIQALRATPPAPPRGAGGGAGGGGGGGGAAQPPPPSPTPPGAAD
SIO_010081: GRIK5
subclass of: SO_0000673
so part of: GRIK5
location: join(339710..339809,340510..340674,341485..341582,342628..342793,343562..343740,344221..344274,344857..345018,346089..346241,347452..347556,348475..348582,349555..349749,351579..351692,353147..353256,354341..354514,355864..356029,356646..356871,356990..357118,357755..357876,358341..358831)
location: region:339710-358831:1
so has part: feature:339710-339809:1:exon
so has part: feature:340510-340674:1:exon
so has part: feature:341485-341582:1:exon
so has part: feature:342628-342793:1:exon
so has part: feature:343562-343740:1:exon
so has part: feature:344221-344274:1:exon
so has part: feature:344857-345018:1:exon
so has part: feature:346089-346241:1:exon
so has part: feature:347452-347556:1:exon
so has part: feature:348475-348582:1:exon
so has part: feature:349555-349749:1:exon
so has part: feature:351579-351692:1:exon
so has part: feature:353147-353256:1:exon
so has part: feature:354341-354514:1:exon
so has part: feature:355864-356029:1:exon
so has part: feature:356646-356871:1:exon
so has part: feature:356990-357118:1:exon
so has part: feature:357755-357876:1:exon
so has part: feature:358341-358831:1:exon

XP_041568323.1
type: Protein
SIO_000068: ncbiprotein

position:339710:1
position: 339710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:358831:1
position: 358831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:339710-339809:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:340510-340674:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:341485-341582:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:342628-342793:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:343562-343740:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:344221-344274:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:344857-345018:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:346089-346241:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:347452-347556:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:348475-348582:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:349555-349749:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:351579-351692:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:353147-353256:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:354341-354514:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:355864-356029:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:356646-356871:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:356990-357118:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:357755-357876:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:358341-358831:1:exon

ATP1A3
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: ATP1A3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 361437..387554
location: region:361437-387554:1
so has part: feature:361437-387554:1:exon
subclass of: SO_0000010

121468573
type: Gene
SIO_000068: ncbigene

position:361437:1
position: 361437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:387554:1
position: 387554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:361437-387554:1:exon

ATP1A3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: ATP1A3
product: ATPase Na+/K+ transporting subunit alpha 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 10 ESTs, 50 long SRA reads, 65 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments, including 86 samples with support for all annotated introns
transcript id: XM_041712367.1
SIO_010081: ATP1A3
subclass of: SO_0000673
so part of: ATP1A3
location: join(361437..361610,366429..366512,366999..367058,368310..368513,369220..369333,369572..369706,370326..370443,371282..371550,372330..372528,373699..373808,374571..374705,375716..375908,376453..376628,377451..377587,378245..378395,379420..379588,380529..380683,381659..381782,383091..383236,384400..384530,385461..385562,386539..386630,387072..387554)
location: region:361437-387554:1
so has part: feature:361437-361610:1:exon
so has part: feature:366429-366512:1:exon
so has part: feature:366999-367058:1:exon
so has part: feature:368310-368513:1:exon
so has part: feature:369220-369333:1:exon
so has part: feature:369572-369706:1:exon
so has part: feature:370326-370443:1:exon
so has part: feature:371282-371550:1:exon
so has part: feature:372330-372528:1:exon
so has part: feature:373699-373808:1:exon
so has part: feature:374571-374705:1:exon
so has part: feature:375716-375908:1:exon
so has part: feature:376453-376628:1:exon
so has part: feature:377451-377587:1:exon
so has part: feature:378245-378395:1:exon
so has part: feature:379420-379588:1:exon
so has part: feature:380529-380683:1:exon
so has part: feature:381659-381782:1:exon
so has part: feature:383091-383236:1:exon
so has part: feature:384400-384530:1:exon
so has part: feature:385461-385562:1:exon
so has part: feature:386539-386630:1:exon
so has part: feature:387072-387554:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:361437-361610:1:exon

position:361610:1
position: 361610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:366429-366512:1:exon

position:366429:1
position: 366429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:366512:1
position: 366512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:366999-367058:1:exon

position:366999:1
position: 366999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:367058:1
position: 367058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:368310-368513:1:exon

position:368310:1
position: 368310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:368513:1
position: 368513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:369220-369333:1:exon

position:369220:1
position: 369220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:369333:1
position: 369333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:369572-369706:1:exon

position:369572:1
position: 369572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:369706:1
position: 369706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:370326-370443:1:exon

position:370326:1
position: 370326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:370443:1
position: 370443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:371282-371550:1:exon

position:371282:1
position: 371282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:371550:1
position: 371550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:372330-372528:1:exon

position:372330:1
position: 372330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:372528:1
position: 372528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:373699-373808:1:exon

position:373699:1
position: 373699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:373808:1
position: 373808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:374571-374705:1:exon

position:374571:1
position: 374571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:374705:1
position: 374705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:375716-375908:1:exon

position:375716:1
position: 375716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:375908:1
position: 375908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:376453-376628:1:exon

position:376453:1
position: 376453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:376628:1
position: 376628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:377451-377587:1:exon

position:377451:1
position: 377451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:377587:1
position: 377587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:378245-378395:1:exon

position:378245:1
position: 378245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:378395:1
position: 378395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:379420-379588:1:exon

position:379420:1
position: 379420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:379588:1
position: 379588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:380529-380683:1:exon

position:380529:1
position: 380529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:380683:1
position: 380683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:381659-381782:1:exon

position:381659:1
position: 381659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:381782:1
position: 381782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:383091-383236:1:exon

position:383091:1
position: 383091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:383236:1
position: 383236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:384400-384530:1:exon

position:384400:1
position: 384400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:384530:1
position: 384530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:385461-385562:1:exon

position:385461:1
position: 385461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:385562:1
position: 385562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:386539-386630:1:exon

position:386539:1
position: 386539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:386630:1
position: 386630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:387072-387554:1:exon

position:387072:1
position: 387072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ATP1A3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: ATP1A3
product: ATPase Na+/K+ transporting subunit alpha 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 9 ESTs, 41 long SRA reads, 65 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments, including 84 samples with support for all annotated introns
transcript id: XM_041712366.1
SIO_010081: ATP1A3
subclass of: SO_0000673
so part of: ATP1A3
location: join(361447..361610,366390..366512,366999..367058,368310..368513,369220..369333,369572..369706,370326..370443,371282..371550,372330..372528,373699..373808,374571..374705,375716..375908,376453..376628,377451..377587,378245..378395,379420..379588,380529..380683,381659..381782,383091..383236,384400..384530,385461..385562,386539..386630,387072..387554)
location: region:361447-387554:1
so has part: feature:361447-361610:1:exon
so has part: feature:366390-366512:1:exon
so has part: feature:366999-367058:1:exon
so has part: feature:368310-368513:1:exon
so has part: feature:369220-369333:1:exon
so has part: feature:369572-369706:1:exon
so has part: feature:370326-370443:1:exon
so has part: feature:371282-371550:1:exon
so has part: feature:372330-372528:1:exon
so has part: feature:373699-373808:1:exon
so has part: feature:374571-374705:1:exon
so has part: feature:375716-375908:1:exon
so has part: feature:376453-376628:1:exon
so has part: feature:377451-377587:1:exon
so has part: feature:378245-378395:1:exon
so has part: feature:379420-379588:1:exon
so has part: feature:380529-380683:1:exon
so has part: feature:381659-381782:1:exon
so has part: feature:383091-383236:1:exon
so has part: feature:384400-384530:1:exon
so has part: feature:385461-385562:1:exon
so has part: feature:386539-386630:1:exon
so has part: feature:387072-387554:1:exon

position:361447:1
position: 361447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:361447-361610:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:366390-366512:1:exon

position:366390:1
position: 366390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:366999-367058:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:368310-368513:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:369220-369333:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:369572-369706:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:370326-370443:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:371282-371550:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:372330-372528:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:373699-373808:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:374571-374705:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:375716-375908:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:376453-376628:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:377451-377587:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:378245-378395:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:379420-379588:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:380529-380683:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:381659-381782:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:383091-383236:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:384400-384530:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:385461-385562:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:386539-386630:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:387072-387554:1:exon

ATP1A3
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 59729
gene: ATP1A3
product: ATPase Na+/K+ transporting subunit alpha 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 1 long SRA read, 2 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 82 samples with support for all annotated introns
transcript id: XR_005978491.1
SIO_010081: ATP1A3
so part of: ATP1A3
location: join(361448..361610,366429..366512,366999..367058,368310..368513,369220..369333,369572..369706,370326..370443,371282..371550,372330..372528,373699..373808,374571..374705,375716..375908,376453..376628,377451..377587,378245..378395,379420..379588,380529..380626,380819..381245,381659..381782,383091..383236,384400..384530,385461..385562,386539..386605)
location: region:361448-386605:1
so has part: feature:361448-361610:1:exon
so has part: feature:366429-366512:1:exon
so has part: feature:366999-367058:1:exon
so has part: feature:368310-368513:1:exon
so has part: feature:369220-369333:1:exon
so has part: feature:369572-369706:1:exon
so has part: feature:370326-370443:1:exon
so has part: feature:371282-371550:1:exon
so has part: feature:372330-372528:1:exon
so has part: feature:373699-373808:1:exon
so has part: feature:374571-374705:1:exon
so has part: feature:375716-375908:1:exon
so has part: feature:376453-376628:1:exon
so has part: feature:377451-377587:1:exon
so has part: feature:378245-378395:1:exon
so has part: feature:379420-379588:1:exon
so has part: feature:380529-380626:1:exon
so has part: feature:380819-381245:1:exon
so has part: feature:381659-381782:1:exon
so has part: feature:383091-383236:1:exon
so has part: feature:384400-384530:1:exon
so has part: feature:385461-385562:1:exon
so has part: feature:386539-386605:1:exon

position:361448:1
position: 361448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:386605:1
position: 386605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:361448-361610:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:366429-366512:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:366999-367058:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:368310-368513:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:369220-369333:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:369572-369706:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:370326-370443:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:371282-371550:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:372330-372528:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:373699-373808:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:374571-374705:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:375716-375908:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:376453-376628:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:377451-377587:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:378245-378395:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:379420-379588:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:380529-380626:1:exon

position:380626:1
position: 380626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:380819-381245:1:exon

position:380819:1
position: 380819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:381245:1
position: 381245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:381659-381782:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:383091-383236:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:384400-384530:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:385461-385562:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:386539-386605:1:exon

ATP1A3
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 59729
gene: ATP1A3
product: ATPase Na+/K+ transporting subunit alpha 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 81 samples with support for all annotated introns
transcript id: XR_005978490.1
SIO_010081: ATP1A3
so part of: ATP1A3
location: join(361563..361610,366390..366512,366999..367058,368310..368513,369220..369333,369572..369706,370326..370443,371282..371550,372330..372528,373699..373808,374571..374705,375716..375908,376453..376628,377451..377587,378245..378395,379420..379588,380529..380626,380819..381245,381659..381782,383091..383236,384400..384530,385461..385562,386539..386605)
location: region:361563-386605:1
so has part: feature:361563-361610:1:exon
so has part: feature:366390-366512:1:exon
so has part: feature:366999-367058:1:exon
so has part: feature:368310-368513:1:exon
so has part: feature:369220-369333:1:exon
so has part: feature:369572-369706:1:exon
so has part: feature:370326-370443:1:exon
so has part: feature:371282-371550:1:exon
so has part: feature:372330-372528:1:exon
so has part: feature:373699-373808:1:exon
so has part: feature:374571-374705:1:exon
so has part: feature:375716-375908:1:exon
so has part: feature:376453-376628:1:exon
so has part: feature:377451-377587:1:exon
so has part: feature:378245-378395:1:exon
so has part: feature:379420-379588:1:exon
so has part: feature:380529-380626:1:exon
so has part: feature:380819-381245:1:exon
so has part: feature:381659-381782:1:exon
so has part: feature:383091-383236:1:exon
so has part: feature:384400-384530:1:exon
so has part: feature:385461-385562:1:exon
so has part: feature:386539-386605:1:exon

position:361563:1
position: 361563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:361563-361610:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:366390-366512:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:366999-367058:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:368310-368513:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:369220-369333:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:369572-369706:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:370326-370443:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:371282-371550:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:372330-372528:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:373699-373808:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:374571-374705:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:375716-375908:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:376453-376628:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:377451-377587:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:378245-378395:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:379420-379588:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:380529-380626:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:380819-381245:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:381659-381782:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:383091-383236:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:384400-384530:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:385461-385562:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:386539-386605:1:exon

ATP1A3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: ATP1A3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium/potassium-transporting ATPase subunit alpha-3 isoform X1
translation: MGFGGSDSYRVATTQDKGGDKESPKKGKSKTRDLDDLKKEVAMTEHKMSIEEVCRKYNTDCVQGLTHSKAQEILARDGPNALTPPPTTPEWVKFCRQLFGGFSILLWIGAILCFLAYGIQAGTEDEPSNDNLYLGIVLAAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIREGEKMQVNAEEVVVGDLVEVKGGDRVPADLRIISAHGCKVDNSSLTGESEPQTRSPDCTHDNPLETRNITFFSTNCVEGTARGVVIATGDRTVMGRIATLASGLEVGKTPIAVEIEHFIQLITGVAVFLGISFFILSLILGYTWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGTAFDKSSPTWVALSHIAGLCNRAVFKGGQENVPILKRDVAGDASESALLKCIELSSGSVKVMRERNKKVAEIPFNSTNKYQLSIHETEDPNDNRYLLVMKGAPERILDRCSTILLQGKEQPLDEEMKEAFQNAYLELGGLGERVLGFCHFYLPEEQYPKGFAFDCDDVNFATDNLCFVGLMSMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVIHGTDLKDMSSEQIDEILQNHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFIMANIPLPLGTITILCIDLGTDMVPAISLAYEAAESDIMKRQPRNPRSDKLVNERLISMAYGQIGMIQALGGFFAYFVILAENGFLPSCLVGIRLRWDDRTINDLEDSYGQQWTYEQRKVVEFTCHTAFFVSIVVVQWADLIICKTRRNSVFQQGMKNKILIFGLFEETALAAFLSYCPGMDVALRMYPLKPSWWFCAFPYSFLIFVYDEIRKLILRRNPGGWVEKETYY
SIO_010081: ATP1A3
subclass of: SO_0000673
so part of: ATP1A3
location: join(361605..361610,366390..366512,366999..367058,368310..368513,369220..369333,369572..369706,370326..370443,371282..371550,372330..372528,373699..373808,374571..374705,375716..375908,376453..376628,377451..377587,378245..378395,379420..379588,380529..380683,381659..381782,383091..383236,384400..384530,385461..385562,386539..386630,387072..387100)
location: region:361605-387100:1
so has part: feature:361605-361610:1:exon
so has part: feature:366390-366512:1:exon
so has part: feature:366999-367058:1:exon
so has part: feature:368310-368513:1:exon
so has part: feature:369220-369333:1:exon
so has part: feature:369572-369706:1:exon
so has part: feature:370326-370443:1:exon
so has part: feature:371282-371550:1:exon
so has part: feature:372330-372528:1:exon
so has part: feature:373699-373808:1:exon
so has part: feature:374571-374705:1:exon
so has part: feature:375716-375908:1:exon
so has part: feature:376453-376628:1:exon
so has part: feature:377451-377587:1:exon
so has part: feature:378245-378395:1:exon
so has part: feature:379420-379588:1:exon
so has part: feature:380529-380683:1:exon
so has part: feature:381659-381782:1:exon
so has part: feature:383091-383236:1:exon
so has part: feature:384400-384530:1:exon
so has part: feature:385461-385562:1:exon
so has part: feature:386539-386630:1:exon
so has part: feature:387072-387100:1:exon

XP_041568300.1
type: Protein
SIO_000068: ncbiprotein

position:361605:1
position: 361605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:387100:1
position: 387100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:361605-361610:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:366390-366512:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:366999-367058:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:368310-368513:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:369220-369333:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:369572-369706:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:370326-370443:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:371282-371550:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:372330-372528:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:373699-373808:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:374571-374705:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:375716-375908:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:376453-376628:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:377451-377587:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:378245-378395:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:379420-379588:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:380529-380683:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:381659-381782:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:383091-383236:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:384400-384530:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:385461-385562:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:386539-386630:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:387072-387100:1:exon

ATP1A3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: ATP1A3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium/potassium-transporting ATPase subunit alpha-3 isoform X2
translation: MGDKGGDKESPKKGKSKTRDLDDLKKEVAMTEHKMSIEEVCRKYNTDCVQGLTHSKAQEILARDGPNALTPPPTTPEWVKFCRQLFGGFSILLWIGAILCFLAYGIQAGTEDEPSNDNLYLGIVLAAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIREGEKMQVNAEEVVVGDLVEVKGGDRVPADLRIISAHGCKVDNSSLTGESEPQTRSPDCTHDNPLETRNITFFSTNCVEGTARGVVIATGDRTVMGRIATLASGLEVGKTPIAVEIEHFIQLITGVAVFLGISFFILSLILGYTWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGTAFDKSSPTWVALSHIAGLCNRAVFKGGQENVPILKRDVAGDASESALLKCIELSSGSVKVMRERNKKVAEIPFNSTNKYQLSIHETEDPNDNRYLLVMKGAPERILDRCSTILLQGKEQPLDEEMKEAFQNAYLELGGLGERVLGFCHFYLPEEQYPKGFAFDCDDVNFATDNLCFVGLMSMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVIHGTDLKDMSSEQIDEILQNHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFIMANIPLPLGTITILCIDLGTDMVPAISLAYEAAESDIMKRQPRNPRSDKLVNERLISMAYGQIGMIQALGGFFAYFVILAENGFLPSCLVGIRLRWDDRTINDLEDSYGQQWTYEQRKVVEFTCHTAFFVSIVVVQWADLIICKTRRNSVFQQGMKNKILIFGLFEETALAAFLSYCPGMDVALRMYPLKPSWWFCAFPYSFLIFVYDEIRKLILRRNPGGWVEKETYY
SIO_010081: ATP1A3
subclass of: SO_0000673
so part of: ATP1A3
location: join(361605..361610,366429..366512,366999..367058,368310..368513,369220..369333,369572..369706,370326..370443,371282..371550,372330..372528,373699..373808,374571..374705,375716..375908,376453..376628,377451..377587,378245..378395,379420..379588,380529..380683,381659..381782,383091..383236,384400..384530,385461..385562,386539..386630,387072..387100)
location: region:361605-387100:1
so has part: feature:361605-361610:1:exon
so has part: feature:366429-366512:1:exon
so has part: feature:366999-367058:1:exon
so has part: feature:368310-368513:1:exon
so has part: feature:369220-369333:1:exon
so has part: feature:369572-369706:1:exon
so has part: feature:370326-370443:1:exon
so has part: feature:371282-371550:1:exon
so has part: feature:372330-372528:1:exon
so has part: feature:373699-373808:1:exon
so has part: feature:374571-374705:1:exon
so has part: feature:375716-375908:1:exon
so has part: feature:376453-376628:1:exon
so has part: feature:377451-377587:1:exon
so has part: feature:378245-378395:1:exon
so has part: feature:379420-379588:1:exon
so has part: feature:380529-380683:1:exon
so has part: feature:381659-381782:1:exon
so has part: feature:383091-383236:1:exon
so has part: feature:384400-384530:1:exon
so has part: feature:385461-385562:1:exon
so has part: feature:386539-386630:1:exon
so has part: feature:387072-387100:1:exon

XP_041568301.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:361605-361610:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:366429-366512:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:366999-367058:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:368310-368513:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:369220-369333:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:369572-369706:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:370326-370443:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:371282-371550:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:372330-372528:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:373699-373808:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:374571-374705:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:375716-375908:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:376453-376628:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:377451-377587:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:378245-378395:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:379420-379588:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:380529-380683:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:381659-381782:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:383091-383236:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:384400-384530:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:385461-385562:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:386539-386630:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:387072-387100:1:exon

ATP1A3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: ATP1A3
product: ATPase Na+/K+ transporting subunit alpha 3, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 132 samples with support for all annotated introns
transcript id: XM_041712369.1
SIO_010081: ATP1A3
subclass of: SO_0000673
so part of: ATP1A3
location: join(381181..381245,381659..381782,383091..383236,384400..384530,385461..385562,386539..386630,387072..387223)
location: region:381181-387223:1
so has part: feature:381181-381245:1:exon
so has part: feature:381659-381782:1:exon
so has part: feature:383091-383236:1:exon
so has part: feature:384400-384530:1:exon
so has part: feature:385461-385562:1:exon
so has part: feature:386539-386630:1:exon
so has part: feature:387072-387223:1:exon

position:381181:1
position: 381181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:387223:1
position: 387223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:381181-381245:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:381659-381782:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:383091-383236:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:384400-384530:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:385461-385562:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:386539-386630:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:387072-387223:1:exon

ATP1A3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: ATP1A3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium/potassium-transporting ATPase subunit alpha-3 isoform X4
translation: MVPAISLAYEAAESDIMKRQPRNPRSDKLVNERLISMAYGQIGMIQALGGFFAYFVILAENGFLPSCLVGIRLRWDDRTINDLEDSYGQQWTYEQRKVVEFTCHTAFFVSIVVVQWADLIICKTRRNSVFQQGMKNKILIFGLFEETALAAFLSYCPGMDVALRMYPLKPSWWFCAFPYSFLIFVYDEIRKLILRRNPGGWVEKETYY
SIO_010081: ATP1A3
subclass of: SO_0000673
so part of: ATP1A3
location: join(381243..381245,381659..381782,383091..383236,384400..384530,385461..385562,386539..386630,387072..387100)
location: region:381243-387100:1
so has part: feature:381243-381245:1:exon
so has part: feature:381659-381782:1:exon
so has part: feature:383091-383236:1:exon
so has part: feature:384400-384530:1:exon
so has part: feature:385461-385562:1:exon
so has part: feature:386539-386630:1:exon
so has part: feature:387072-387100:1:exon

XP_041568303.1
type: Protein
SIO_000068: ncbiprotein

position:381243:1
position: 381243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:381243-381245:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:381659-381782:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:383091-383236:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:384400-384530:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:385461-385562:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:386539-386630:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:387072-387100:1:exon

ATP1A3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: ATP1A3
product: ATPase Na+/K+ transporting subunit alpha 3, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 118 samples with support for all annotated introns
transcript id: XM_041712368.1
SIO_010081: ATP1A3
subclass of: SO_0000673
so part of: ATP1A3
location: join(382114..382156,383091..383236,384400..384530,385461..385562,386539..386630,387072..387223)
location: region:382114-387223:1
so has part: feature:382114-382156:1:exon
so has part: feature:383091-383236:1:exon
so has part: feature:384400-384530:1:exon
so has part: feature:385461-385562:1:exon
so has part: feature:386539-386630:1:exon
so has part: feature:387072-387223:1:exon

position:382114:1
position: 382114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:382114-382156:1:exon

position:382156:1
position: 382156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:383091-383236:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:384400-384530:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:385461-385562:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:386539-386630:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:387072-387223:1:exon

ATP1A3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: ATP1A3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium/potassium-transporting ATPase subunit alpha-3 isoform X3
translation: MAYGQIGMIQALGGFFAYFVILAENGFLPSCLVGIRLRWDDRTINDLEDSYGQQWTYEQRKVVEFTCHTAFFVSIVVVQWADLIICKTRRNSVFQQGMKNKILIFGLFEETALAAFLSYCPGMDVALRMYPLKPSWWFCAFPYSFLIFVYDEIRKLILRRNPGGWVEKETYY
SIO_010081: ATP1A3
subclass of: SO_0000673
so part of: ATP1A3
location: join(382138..382156,383091..383236,384400..384530,385461..385562,386539..386630,387072..387100)
location: region:382138-387100:1
so has part: feature:382138-382156:1:exon
so has part: feature:383091-383236:1:exon
so has part: feature:384400-384530:1:exon
so has part: feature:385461-385562:1:exon
so has part: feature:386539-386630:1:exon
so has part: feature:387072-387100:1:exon

XP_041568302.1
type: Protein
SIO_000068: ncbiprotein

position:382138:1
position: 382138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:382138-382156:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:383091-383236:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:384400-384530:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:385461-385562:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:386539-386630:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:387072-387100:1:exon

RABAC1
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: RABAC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(388644..393392)
location: region:388644-393392:-1
so has part: feature:388644-393392:-1:exon
subclass of: SO_0000010

121468615
type: Gene
SIO_000068: ncbigene

position:388644:-1
position: 388644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:393392:-1
position: 393392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:388644-393392:-1:exon

RABAC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: RABAC1
product: Rab acceptor 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 60 samples with support for all annotated introns
transcript id: XM_041712442.1
SIO_010081: RABAC1
subclass of: SO_0000673
so part of: RABAC1
location: complement(join(388644..388771,389700..389801,390186..390277,391231..391428,392322..392397,393331..393392))
location: region:388644-393392:-1
so has part: feature:393331-393392:-1:exon
so has part: feature:392322-392397:-1:exon
so has part: feature:391231-391428:-1:exon
so has part: feature:390186-390277:-1:exon
so has part: feature:389700-389801:-1:exon
so has part: feature:388644-388771:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:393331-393392:-1:exon

position:393331:-1
position: 393331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:392322-392397:-1:exon

position:392322:-1
position: 392322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:392397:-1
position: 392397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:391231-391428:-1:exon

position:391231:-1
position: 391231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:391428:-1
position: 391428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:390186-390277:-1:exon

position:390186:-1
position: 390186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:390277:-1
position: 390277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:389700-389801:-1:exon

position:389700:-1
position: 389700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:389801:-1
position: 389801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:388644-388771:-1:exon

position:388771:-1
position: 388771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RABAC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: RABAC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: prenylated Rab acceptor protein 1
translation: MAEVAPPPQEPPGAESDPRGGLGRLSPPGWAWRWLGARRAGLRPWGSFLDQRRFGVPRDLGELWRRLGQNAERFQSNYLLLFLALLLYCLLSSPLLLVALGVFFGVAVRLRAREAPLVLLGRELSPAHQLGVAAGVSLPLFWLAGAGAALFWLLGAALVFLGSHAAFRELEPPESAELQMEPV
SIO_010081: RABAC1
subclass of: SO_0000673
so part of: RABAC1
location: complement(join(388683..388771,389700..389801,390186..390277,391231..391428,392322..392392))
location: region:388683-392392:-1
so has part: feature:392322-392392:-1:exon
so has part: feature:391231-391428:-1:exon
so has part: feature:390186-390277:-1:exon
so has part: feature:389700-389801:-1:exon
so has part: feature:388683-388771:-1:exon

XP_041568376.1
type: Protein
SIO_000068: ncbiprotein

position:388683:-1
position: 388683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:392392:-1
position: 392392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:392322-392392:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:391231-391428:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:390186-390277:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:389700-389801:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:388683-388771:-1:exon

LOC121468584
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121468584
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 407759..415450
location: region:407759-415450:1
so has part: feature:407759-415450:1:exon
subclass of: SO_0000010

121468584
type: Gene
SIO_000068: ncbigene

position:407759:1
position: 407759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:415450:1
position: 415450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:407759-415450:1:exon

LOC121468584
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC121468584
product: formin-like protein 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_041712395.1
SIO_010081: LOC121468584
subclass of: SO_0000673
so part of: LOC121468584
location: join(407759..408557,414510..414587,415413..415450)
location: region:407759-415450:1
so has part: feature:407759-408557:1:exon
so has part: feature:414510-414587:1:exon
so has part: feature:415413-415450:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:407759-408557:1:exon

position:408557:1
position: 408557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:414510-414587:1:exon

position:414510:1
position: 414510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:414587:1
position: 414587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:415413-415450:1:exon

position:415413:1
position: 415413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121468584
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC121468584
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: formin-like protein 5
translation: MPVRCRFGPVPVPLPPRSGSLPPRVAPVTITDGSIAPDRWRRERRTPPNPPRTPPNSPRTPPNPSGTANTPRSSPRYRRNPPGTVNTLRHCRDPPEPPGTVNSLRSSSGHRRNPPNPPEPPPVPSTTSGTAGTPPEPPRYRQHPPEQPPVPPEPPRTPRPHPEPPRYRQHPPEQPPVPPEPPRTPTNPPDPPRYRQHPPALPEPPPNPPNHPGTANTPRSSPRYHRSVPGAAGPPPEPPDPIPNPPEPPPGTVNTPRCCRTPPRLPGVSPAMECTCVPDLLLTAPLPALWSPGFAFPEWAQEGQ
SIO_010081: LOC121468584
subclass of: SO_0000673
so part of: LOC121468584
location: join(407759..408557,414510..414587,415413..415450)
location: region:407759-415450:1
so has part: feature:407759-408557:1:exon
so has part: feature:414510-414587:1:exon
so has part: feature:415413-415450:1:exon

XP_041568329.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:407759-408557:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:414510-414587:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:415413-415450:1:exon

ERFL
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: ERFL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <415524..417702
location: region:415524-417702:1
so has part: feature:415524-417702:1:exon
subclass of: SO_0000010

121468585
type: Gene
SIO_000068: ncbigene

position:415524:1
position: 415524
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:417702:1
position: 417702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:415524-417702:1:exon

ERFL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: ERFL
product: ETS repressor factor like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 49% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041712396.1
SIO_010081: ERFL
subclass of: SO_0000673
so part of: ERFL
location: join(<415524..415786,416235..416412,416947..416995,417338..417702)
location: region:415524-417702:1
so has part: feature:415524-415786:1:exon
so has part: feature:416235-416412:1:exon
so has part: feature:416947-416995:1:exon
so has part: feature:417338-417702:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:415524-415786:1:exon

position:415786:1
position: 415786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:416235-416412:1:exon

position:416235:1
position: 416235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:416412:1
position: 416412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:416947-416995:1:exon

position:416947:1
position: 416947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:416995:1
position: 416995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:417338-417702:1:exon

position:417338:1
position: 417338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ERFL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: ERFL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ETS domain-containing transcription factor ERF-like
translation: RHTDSVPHSGFAFPEWAYKAESSPGSRQIQLWHFILELLRQERYREVIAWQGDYGEFVIKDPDEVARLWGVRKCKPHMNYDKLSRALRYYYNKRILHKTKGKRFTYKFNFSKVVLVNCPLLEFGGGAPLLLTPAPCPGPECAPLTPERPPETPETPEKPFPGPGLSGYSKAPALFGAGGFARPPLPEYPWGWGSYLPLPPPPAKLPPPPGGLYPPPFYLPPPPPAPPATPAHPPQAGGGEGSDSELEVTDGGGASSGDEAEPPPPARTPPPAQTPARGKGPARA
SIO_010081: ERFL
subclass of: SO_0000673
so part of: ERFL
location: join(<415524..415786,416235..416412,416947..416995,417338..417702)
location: region:415524-417702:1
so has part: feature:415524-415786:1:exon
so has part: feature:416235-416412:1:exon
so has part: feature:416947-416995:1:exon
so has part: feature:417338-417702:1:exon

XP_041568330.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:415524-415786:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:416235-416412:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:416947-416995:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:417338-417702:1:exon

ARHGEF1
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: ARHGEF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(420330..435156)
location: region:420330-435156:-1
so has part: feature:420330-435156:-1:exon
subclass of: SO_0000010

121468568
type: Gene
SIO_000068: ncbigene

position:420330:-1
position: 420330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:435156:-1
position: 435156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:420330-435156:-1:exon

ARHGEF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: ARHGEF1
product: Rho guanine nucleotide exchange factor 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_041712359.1
SIO_010081: ARHGEF1
subclass of: SO_0000673
so part of: ARHGEF1
location: complement(join(420330..420486,421303..421361,421953..422060,422386..422473,423324..423491,423637..423712,424333..424410,424805..424905,425720..425834,426319..426444,427171..427253,427339..427485,428138..428319,429055..429192,429480..429491,430035..430131,430210..430381,431040..431078,431315..431375,431954..431983,432714..432854,432943..433048,433595..433637,433729..433827,433958..433970,434110..434223,434327..434389,435110..435156))
location: region:420330-435156:-1
so has part: feature:435110-435156:-1:exon
so has part: feature:434327-434389:-1:exon
so has part: feature:434110-434223:-1:exon
so has part: feature:433958-433970:-1:exon
so has part: feature:433729-433827:-1:exon
so has part: feature:433595-433637:-1:exon
so has part: feature:432943-433048:-1:exon
so has part: feature:432714-432854:-1:exon
so has part: feature:431954-431983:-1:exon
so has part: feature:431315-431375:-1:exon
so has part: feature:431040-431078:-1:exon
so has part: feature:430210-430381:-1:exon
so has part: feature:430035-430131:-1:exon
so has part: feature:429480-429491:-1:exon
so has part: feature:429055-429192:-1:exon
so has part: feature:428138-428319:-1:exon
so has part: feature:427339-427485:-1:exon
so has part: feature:427171-427253:-1:exon
so has part: feature:426319-426444:-1:exon
so has part: feature:425720-425834:-1:exon
so has part: feature:424805-424905:-1:exon
so has part: feature:424333-424410:-1:exon
so has part: feature:423637-423712:-1:exon
so has part: feature:423324-423491:-1:exon
so has part: feature:422386-422473:-1:exon
so has part: feature:421953-422060:-1:exon
so has part: feature:421303-421361:-1:exon
so has part: feature:420330-420486:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:435110-435156:-1:exon

position:435110:-1
position: 435110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:434327-434389:-1:exon

position:434327:-1
position: 434327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:434389:-1
position: 434389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:434110-434223:-1:exon

position:434110:-1
position: 434110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:434223:-1
position: 434223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:433958-433970:-1:exon

position:433958:-1
position: 433958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:433970:-1
position: 433970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:433729-433827:-1:exon

position:433729:-1
position: 433729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:433827:-1
position: 433827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:433595-433637:-1:exon

position:433595:-1
position: 433595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:433637:-1
position: 433637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:432943-433048:-1:exon

position:432943:-1
position: 432943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:433048:-1
position: 433048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:432714-432854:-1:exon

position:432714:-1
position: 432714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:432854:-1
position: 432854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:431954-431983:-1:exon

position:431954:-1
position: 431954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:431983:-1
position: 431983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:431315-431375:-1:exon

position:431315:-1
position: 431315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:431375:-1
position: 431375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:431040-431078:-1:exon

position:431040:-1
position: 431040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:431078:-1
position: 431078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:430210-430381:-1:exon

position:430210:-1
position: 430210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:430381:-1
position: 430381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:430035-430131:-1:exon

position:430035:-1
position: 430035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:430131:-1
position: 430131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:429480-429491:-1:exon

position:429480:-1
position: 429480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:429491:-1
position: 429491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:429055-429192:-1:exon

position:429055:-1
position: 429055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:429192:-1
position: 429192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:428138-428319:-1:exon

position:428138:-1
position: 428138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:428319:-1
position: 428319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:427339-427485:-1:exon

position:427339:-1
position: 427339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:427485:-1
position: 427485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:427171-427253:-1:exon

position:427171:-1
position: 427171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:427253:-1
position: 427253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:426319-426444:-1:exon

position:426319:-1
position: 426319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:426444:-1
position: 426444
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 20
SIO_000628: feature:425720-425834:-1:exon

position:425720:-1
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position:425834:-1
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urn:…
SIO_000300: 21
SIO_000628: feature:424805-424905:-1:exon

position:424805:-1
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reference: sequence
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position:424905:-1
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urn:…
SIO_000300: 22
SIO_000628: feature:424333-424410:-1:exon

position:424333:-1
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reference: sequence
type: ReverseStrandPosition
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position:424410:-1
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reference: sequence
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urn:…
SIO_000300: 23
SIO_000628: feature:423637-423712:-1:exon

position:423637:-1
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reference: sequence
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position:423712:-1
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urn:…
SIO_000300: 24
SIO_000628: feature:423324-423491:-1:exon

position:423324:-1
position: 423324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:423491:-1
position: 423491
reference: sequence
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urn:…
SIO_000300: 25
SIO_000628: feature:422386-422473:-1:exon

position:422386:-1
position: 422386
reference: sequence
type: ReverseStrandPosition
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position:422473:-1
position: 422473
reference: sequence
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urn:…
SIO_000300: 26
SIO_000628: feature:421953-422060:-1:exon

position:421953:-1
position: 421953
reference: sequence
type: ReverseStrandPosition
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position:422060:-1
position: 422060
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 27
SIO_000628: feature:421303-421361:-1:exon

position:421303:-1
position: 421303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:421361:-1
position: 421361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:420330-420486:-1:exon

position:420486:-1
position: 420486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ARHGEF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: ARHGEF1
product: Rho guanine nucleotide exchange factor 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_041712360.1
SIO_010081: ARHGEF1
subclass of: SO_0000673
so part of: ARHGEF1
location: complement(join(420331..420486,421303..421361,421953..422060,422386..422473,423324..423491,423637..423712,424333..424410,424805..424905,425720..425834,426319..426444,427171..427253,427339..427485,428138..428319,429055..429192,430035..430131,430210..430381,431040..431078,431315..431375,431954..431983,432714..432854,432943..433048,433595..433637,433729..433827,434110..434223,434327..434389,435110..435156))
location: region:420331-435156:-1
so has part: feature:435110-435156:-1:exon
so has part: feature:434327-434389:-1:exon
so has part: feature:434110-434223:-1:exon
so has part: feature:433729-433827:-1:exon
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so has part: feature:421953-422060:-1:exon
so has part: feature:421303-421361:-1:exon
so has part: feature:420331-420486:-1:exon

position:420331:-1
position: 420331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:435110-435156:-1:exon

urn:…
SIO_000300: 2
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SIO_000628: feature:434110-434223:-1:exon

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SIO_000300: 4
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SIO_000300: 8
SIO_000628: feature:431954-431983:-1:exon

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SIO_000300: 9
SIO_000628: feature:431315-431375:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:431040-431078:-1:exon

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SIO_000300: 11
SIO_000628: feature:430210-430381:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:430035-430131:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:429055-429192:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:428138-428319:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:427339-427485:-1:exon

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SIO_000300: 16
SIO_000628: feature:427171-427253:-1:exon

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SIO_000300: 17
SIO_000628: feature:426319-426444:-1:exon

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SIO_000300: 18
SIO_000628: feature:425720-425834:-1:exon

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SIO_000300: 19
SIO_000628: feature:424805-424905:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:424333-424410:-1:exon

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SIO_000300: 21
SIO_000628: feature:423637-423712:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:423324-423491:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:422386-422473:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:421953-422060:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:421303-421361:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:420331-420486:-1:exon

ARHGEF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: ARHGEF1
product: Rho guanine nucleotide exchange factor 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_041712358.1
SIO_010081: ARHGEF1
subclass of: SO_0000673
so part of: ARHGEF1
location: complement(join(420331..420486,421303..421361,421953..422060,422386..422473,423324..423491,423637..423712,424333..424410,424805..424905,425720..425834,426319..426444,427171..427253,427339..427485,428138..428319,429055..429192,429480..429491,430035..430131,430210..430381,431040..431078,431315..431375,431954..431983,432714..432854,432943..433048,433595..433637,433729..433827,434110..434223,434327..434389,435110..435156))
location: region:420331-435156:-1
so has part: feature:435110-435156:-1:exon
so has part: feature:434327-434389:-1:exon
so has part: feature:434110-434223:-1:exon
so has part: feature:433729-433827:-1:exon
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so has part: feature:432714-432854:-1:exon
so has part: feature:431954-431983:-1:exon
so has part: feature:431315-431375:-1:exon
so has part: feature:431040-431078:-1:exon
so has part: feature:430210-430381:-1:exon
so has part: feature:430035-430131:-1:exon
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so has part: feature:429055-429192:-1:exon
so has part: feature:428138-428319:-1:exon
so has part: feature:427339-427485:-1:exon
so has part: feature:427171-427253:-1:exon
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so has part: feature:425720-425834:-1:exon
so has part: feature:424805-424905:-1:exon
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so has part: feature:421303-421361:-1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:435110-435156:-1:exon

urn:…
SIO_000300: 2
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urn:…
SIO_000300: 3
SIO_000628: feature:434110-434223:-1:exon

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SIO_000300: 4
SIO_000628: feature:433729-433827:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:433595-433637:-1:exon

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SIO_000300: 6
SIO_000628: feature:432943-433048:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:432714-432854:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:431954-431983:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:431315-431375:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:431040-431078:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:430210-430381:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:430035-430131:-1:exon

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SIO_000300: 13
SIO_000628: feature:429480-429491:-1:exon

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SIO_000300: 14
SIO_000628: feature:429055-429192:-1:exon

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SIO_000300: 15
SIO_000628: feature:428138-428319:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:427339-427485:-1:exon

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SIO_000300: 17
SIO_000628: feature:427171-427253:-1:exon

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SIO_000300: 18
SIO_000628: feature:426319-426444:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:425720-425834:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:424805-424905:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:424333-424410:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:423637-423712:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:423324-423491:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:422386-422473:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:421953-422060:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:421303-421361:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:420331-420486:-1:exon

ARHGEF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: ARHGEF1
product: Rho guanine nucleotide exchange factor 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041712361.1
SIO_010081: ARHGEF1
subclass of: SO_0000673
so part of: ARHGEF1
location: complement(join(420332..420486,421303..421361,421953..422060,422386..422473,423324..423491,423637..423712,424333..424410,424805..424905,425720..425834,426319..426444,427171..427253,427339..427485,428138..428319,430035..430131,430210..430381,431040..431078,431315..431375,431954..431983,432714..432854,432943..433048,433595..433637,433729..433827,434110..434223,434327..434389,435110..435156))
location: region:420332-435156:-1
so has part: feature:435110-435156:-1:exon
so has part: feature:434327-434389:-1:exon
so has part: feature:434110-434223:-1:exon
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so has part: feature:433595-433637:-1:exon
so has part: feature:432943-433048:-1:exon
so has part: feature:432714-432854:-1:exon
so has part: feature:431954-431983:-1:exon
so has part: feature:431315-431375:-1:exon
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so has part: feature:421953-422060:-1:exon
so has part: feature:421303-421361:-1:exon
so has part: feature:420332-420486:-1:exon

position:420332:-1
position: 420332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:435110-435156:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:434327-434389:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:434110-434223:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:433729-433827:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:433595-433637:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:432943-433048:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:432714-432854:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:431954-431983:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:431315-431375:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:431040-431078:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:430210-430381:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:430035-430131:-1:exon

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SIO_000300: 13
SIO_000628: feature:428138-428319:-1:exon

urn:…
SIO_000300: 14
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urn:…
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SIO_000300: 16
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urn:…
SIO_000300: 17
SIO_000628: feature:425720-425834:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:424805-424905:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:424333-424410:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:423637-423712:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:423324-423491:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:422386-422473:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:421953-422060:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:421303-421361:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:420332-420486:-1:exon

ARHGEF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: ARHGEF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor 1 isoform X4
translation: MDPEERFNGPPPAAPIIGAEDEDFENDIEPTPEEQSSPFQSLELLRQRPLALAAFLQHVVLQFDPCPVLCYLHAEMMRRMSPKEGRKQFQEFCHLFLDKAGLLRVPVPHHVQFELERSRPELLPEETQRRFLRDVQSLQEPEIRRQLEDFRSKRLMGMTPGEAELAELERGRARDPAGCEARERLLAQGLLARLEEMHPTISSDEEKRERPGRVSASPGPRCGAETPTVLRSGRAKALRAKPRSPSPPIGGSRGGVRGGPPAPPAWGGGPVGTPDPPPGPPPTTAPPPPGGDSTEAETGTDPPGPPELGEPLPEPPPEPPAEEGGAESSDSPEPGGPGGGDPPPGGGSEGSVGRVEPELLEQDPPAWRERAAPEALRGLPQREVRRQEVLNELFLTEHAHVRMLRVLLELFYQPMLREGFFDEQELSNIFPSLEDLVEVHTAFLDSLKKLREESGFIIAEIGDVLLARFEGTEGSWFQKISARFCSRQSFALEQLKAKQRKDTRFSQFIQEAESRPRCRRLQLKDIIPTEMQRLTKYPLLLLSITKCTEEAAERSKVQRAAECCRQILNRVNREVRDMENLMKLKDYQRRLDLSGVKQSSDPLLNEFKNTDITKRTLVHEGPLTWRVARDKAVEVQVLLLDDLLVLLQRHEERLLLRCHSRALAPAPDGKRTLSPVIRLRCAMTRQVATDHKAFYVIASWEDGAQIYELVAPSVADRKTWCSIITDAAGSLKLPETLRGKGAQPGGGHGPPAPLDYRDPSENGGGSLKEPLPLDERDKDGAVEGTEFGDPPERGGLGGLPRPPRGPEGGGAGGRRPAER
SIO_010081: ARHGEF1
subclass of: SO_0000673
so part of: ARHGEF1
location: complement(join(420350..420486,421303..421361,421953..422060,422386..422473,423324..423491,423637..423712,424333..424410,424805..424905,425720..425834,426319..426444,427171..427253,427339..427485,428138..428319,430035..430131,430210..430381,431040..431078,431315..431375,431954..431983,432714..432854,432943..433048,433595..433637,433729..433827,434110..434223,434327..434389,435110..435136))
location: region:420350-435136:-1
so has part: feature:435110-435136:-1:exon
so has part: feature:434327-434389:-1:exon
so has part: feature:434110-434223:-1:exon
so has part: feature:433729-433827:-1:exon
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so has part: feature:432714-432854:-1:exon
so has part: feature:431954-431983:-1:exon
so has part: feature:431315-431375:-1:exon
so has part: feature:431040-431078:-1:exon
so has part: feature:430210-430381:-1:exon
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so has part: feature:427171-427253:-1:exon
so has part: feature:426319-426444:-1:exon
so has part: feature:425720-425834:-1:exon
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so has part: feature:424333-424410:-1:exon
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so has part: feature:421953-422060:-1:exon
so has part: feature:421303-421361:-1:exon
so has part: feature:420350-420486:-1:exon

XP_041568295.1
type: Protein
SIO_000068: ncbiprotein

position:420350:-1
position: 420350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:435136:-1
position: 435136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:435110-435136:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:434327-434389:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:434110-434223:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:433729-433827:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:433595-433637:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:432943-433048:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:432714-432854:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:431954-431983:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:431315-431375:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:431040-431078:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:430210-430381:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:430035-430131:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:428138-428319:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:427339-427485:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:427171-427253:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:426319-426444:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:425720-425834:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:424805-424905:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:424333-424410:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:423637-423712:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:423324-423491:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:422386-422473:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:421953-422060:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:421303-421361:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:420350-420486:-1:exon

ARHGEF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: ARHGEF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor 1 isoform X3
translation: MDPEERFNGPPPAAPIIGAEDEDFENDIEPTPEEQSSPFQSLELLRQRPLALAAFLQHVVLQFDPCPVLCYLHAEMMRRMSPKEGRKQFQEFCHLFLDKAGLLRVPVPHHVQFELERSRPELLPEETQRRFLRDVQSLQEPEIRRQLEDFRSKRLMGMTPGEAELAELERGRARDPAGCEARERLLAQGLLARLEEMHPTISSDEEKRERPGRVSASPGPRCGAETPTVLRSGRAKALRAKPRSPSPPIGGSRGGVRGGPPAPPAWGGGPVGTPDPPPGPPPTTAPPPPGGDSTEAETGTDPPGPPELGEPLPEPPPEPPAEEGGAESSDRIPPRLGRSESLGAPPERRRSQKSGGGLQPPPPRSRSNADLQGPPPTPEPGGPGGGDPPPGGGSEGSVGRVEPELLEQDPPAWRERAAPEALRGLPQREVRRQEVLNELFLTEHAHVRMLRVLLELFYQPMLREGFFDEQELSNIFPSLEDLVEVHTAFLDSLKKLREESGFIIAEIGDVLLARFEGTEGSWFQKISARFCSRQSFALEQLKAKQRKDTRFSQFIQEAESRPRCRRLQLKDIIPTEMQRLTKYPLLLLSITKCTEEAAERSKVQRAAECCRQILNRVNREVRDMENLMKLKDYQRRLDLSGVKQSSDPLLNEFKNTDITKRTLVHEGPLTWRVARDKAVEVQVLLLDDLLVLLQRHEERLLLRCHSRALAPAPDGKRTLSPVIRLRCAMTRQVATDHKAFYVIASWEDGAQIYELVAPSVADRKTWCSIITDAAGSLKLPETLRGKGAQPGGGHGPPAPLDYRDPSENGGGSLKEPLPLDERDKDGAVEGTEFGDPPERGGLGGLPRPPRGPEGGGAGGRRPAER
SIO_010081: ARHGEF1
subclass of: SO_0000673
so part of: ARHGEF1
location: complement(join(420350..420486,421303..421361,421953..422060,422386..422473,423324..423491,423637..423712,424333..424410,424805..424905,425720..425834,426319..426444,427171..427253,427339..427485,428138..428319,429055..429192,430035..430131,430210..430381,431040..431078,431315..431375,431954..431983,432714..432854,432943..433048,433595..433637,433729..433827,434110..434223,434327..434389,435110..435136))
location: region:420350-435136:-1
so has part: feature:435110-435136:-1:exon
so has part: feature:434327-434389:-1:exon
so has part: feature:434110-434223:-1:exon
so has part: feature:433729-433827:-1:exon
so has part: feature:433595-433637:-1:exon
so has part: feature:432943-433048:-1:exon
so has part: feature:432714-432854:-1:exon
so has part: feature:431954-431983:-1:exon
so has part: feature:431315-431375:-1:exon
so has part: feature:431040-431078:-1:exon
so has part: feature:430210-430381:-1:exon
so has part: feature:430035-430131:-1:exon
so has part: feature:429055-429192:-1:exon
so has part: feature:428138-428319:-1:exon
so has part: feature:427339-427485:-1:exon
so has part: feature:427171-427253:-1:exon
so has part: feature:426319-426444:-1:exon
so has part: feature:425720-425834:-1:exon
so has part: feature:424805-424905:-1:exon
so has part: feature:424333-424410:-1:exon
so has part: feature:423637-423712:-1:exon
so has part: feature:423324-423491:-1:exon
so has part: feature:422386-422473:-1:exon
so has part: feature:421953-422060:-1:exon
so has part: feature:421303-421361:-1:exon
so has part: feature:420350-420486:-1:exon

XP_041568294.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:435110-435136:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:434327-434389:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:434110-434223:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:433729-433827:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:433595-433637:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:432943-433048:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:432714-432854:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:431954-431983:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:431315-431375:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:431040-431078:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:430210-430381:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:430035-430131:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:429055-429192:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:428138-428319:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:427339-427485:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:427171-427253:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:426319-426444:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:425720-425834:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:424805-424905:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:424333-424410:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:423637-423712:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:423324-423491:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:422386-422473:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:421953-422060:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:421303-421361:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:420350-420486:-1:exon

ARHGEF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: ARHGEF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor 1 isoform X1
translation: MDPEERFNGPPPAAPIIGAEDEDFENDIEPTPEEQSSPFQSLELLRQRPLALAAFLQHVVLQFDPCPVLCYLHAEMMRRMSPKEGRKQFQEFCHLFLDKAGLLRVPVPHHVQFELERSRPELLPEETQRRFLRDVQSLQEPEIRRQLEDFRSKRLMGMTPGEAELAELERGRARDPAGCEARERLLAQGLLARLEEMHPTISSDEEKRERPGRVSASPGPRCGAETPTVLRSGRAKALRAKPRSPSPPIGGSRGGVRGGPPAPPAWGGGPVGTPDPPPGPPPTTAPPPPGGDSTEAETGTDPPGPPELGEPLPEPPPEPPAEEGGAESSDRRRLRIPPRLGRSESLGAPPERRRSQKSGGGLQPPPPRSRSNADLQGPPPTPEPGGPGGGDPPPGGGSEGSVGRVEPELLEQDPPAWRERAAPEALRGLPQREVRRQEVLNELFLTEHAHVRMLRVLLELFYQPMLREGFFDEQELSNIFPSLEDLVEVHTAFLDSLKKLREESGFIIAEIGDVLLARFEGTEGSWFQKISARFCSRQSFALEQLKAKQRKDTRFSQFIQEAESRPRCRRLQLKDIIPTEMQRLTKYPLLLLSITKCTEEAAERSKVQRAAECCRQILNRVNREVRDMENLMKLKDYQRRLDLSGVKQSSDPLLNEFKNTDITKRTLVHEGPLTWRVARDKAVEVQVLLLDDLLVLLQRHEERLLLRCHSRALAPAPDGKRTLSPVIRLRCAMTRQVATDHKAFYVIASWEDGAQIYELVAPSVADRKTWCSIITDAAGSLKLPETLRGKGAQPGGGHGPPAPLDYRDPSENGGGSLKEPLPLDERDKDGAVEGTEFGDPPERGGLGGLPRPPRGPEGGGAGGRRPAER
SIO_010081: ARHGEF1
subclass of: SO_0000673
so part of: ARHGEF1
location: complement(join(420350..420486,421303..421361,421953..422060,422386..422473,423324..423491,423637..423712,424333..424410,424805..424905,425720..425834,426319..426444,427171..427253,427339..427485,428138..428319,429055..429192,429480..429491,430035..430131,430210..430381,431040..431078,431315..431375,431954..431983,432714..432854,432943..433048,433595..433637,433729..433827,434110..434223,434327..434389,435110..435136))
location: region:420350-435136:-1
so has part: feature:435110-435136:-1:exon
so has part: feature:434327-434389:-1:exon
so has part: feature:434110-434223:-1:exon
so has part: feature:433729-433827:-1:exon
so has part: feature:433595-433637:-1:exon
so has part: feature:432943-433048:-1:exon
so has part: feature:432714-432854:-1:exon
so has part: feature:431954-431983:-1:exon
so has part: feature:431315-431375:-1:exon
so has part: feature:431040-431078:-1:exon
so has part: feature:430210-430381:-1:exon
so has part: feature:430035-430131:-1:exon
so has part: feature:429480-429491:-1:exon
so has part: feature:429055-429192:-1:exon
so has part: feature:428138-428319:-1:exon
so has part: feature:427339-427485:-1:exon
so has part: feature:427171-427253:-1:exon
so has part: feature:426319-426444:-1:exon
so has part: feature:425720-425834:-1:exon
so has part: feature:424805-424905:-1:exon
so has part: feature:424333-424410:-1:exon
so has part: feature:423637-423712:-1:exon
so has part: feature:423324-423491:-1:exon
so has part: feature:422386-422473:-1:exon
so has part: feature:421953-422060:-1:exon
so has part: feature:421303-421361:-1:exon
so has part: feature:420350-420486:-1:exon

XP_041568292.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:435110-435136:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:434327-434389:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:434110-434223:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:433729-433827:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:433595-433637:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:432943-433048:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:432714-432854:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:431954-431983:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:431315-431375:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:431040-431078:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:430210-430381:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:430035-430131:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:429480-429491:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:429055-429192:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:428138-428319:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:427339-427485:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:427171-427253:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:426319-426444:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:425720-425834:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:424805-424905:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:424333-424410:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:423637-423712:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:423324-423491:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:422386-422473:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:421953-422060:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:421303-421361:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:420350-420486:-1:exon

ARHGEF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: ARHGEF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor 1 isoform X2
translation: MGPPRPPPSSARRMRTSRTTSNPPPRSRAAPSRAWSCCGSGRWPWRPSCSTSCSSSTPAPWGGDELCYLHAEMMRRMSPKEGRKQFQEFCHLFLDKAGLLRVPVPHHVQFELERSRPELLPEETQRRFLRDVQSLQEPEIRRQLEDFRSKRLMGMTPGEAELAELERGRARDPAGCEARERLLAQGLLARLEEMHPTISSDEEKRERPGRVSASPGPRCGAETPTVLRSGRAKALRAKPRSPSPPIGGSRGGVRGGPPAPPAWGGGPVGTPDPPPGPPPTTAPPPPGGDSTEAETGTDPPGPPELGEPLPEPPPEPPAEEGGAESSDRRRLRIPPRLGRSESLGAPPERRRSQKSGGGLQPPPPRSRSNADLQGPPPTPEPGGPGGGDPPPGGGSEGSVGRVEPELLEQDPPAWRERAAPEALRGLPQREVRRQEVLNELFLTEHAHVRMLRVLLELFYQPMLREGFFDEQELSNIFPSLEDLVEVHTAFLDSLKKLREESGFIIAEIGDVLLARFEGTEGSWFQKISARFCSRQSFALEQLKAKQRKDTRFSQFIQEAESRPRCRRLQLKDIIPTEMQRLTKYPLLLLSITKCTEEAAERSKVQRAAECCRQILNRVNREVRDMENLMKLKDYQRRLDLSGVKQSSDPLLNEFKNTDITKRTLVHEGPLTWRVARDKAVEVQVLLLDDLLVLLQRHEERLLLRCHSRALAPAPDGKRTLSPVIRLRCAMTRQVATDHKAFYVIASWEDGAQIYELVAPSVADRKTWCSIITDAAGSLKLPETLRGKGAQPGGGHGPPAPLDYRDPSENGGGSLKEPLPLDERDKDGAVEGTEFGDPPERGGLGGLPRPPRGPEGGGAGGRRPAER
SIO_010081: ARHGEF1
subclass of: SO_0000673
so part of: ARHGEF1
location: complement(join(420350..420486,421303..421361,421953..422060,422386..422473,423324..423491,423637..423712,424333..424410,424805..424905,425720..425834,426319..426444,427171..427253,427339..427485,428138..428319,429055..429192,429480..429491,430035..430131,430210..430381,431040..431078,431315..431375,431954..431983,432714..432854,432943..433048,433595..433637,433729..433827,433958..433970,434110..434223,434327..434389,435110..435114))
location: region:420350-435114:-1
so has part: feature:435110-435114:-1:exon
so has part: feature:434327-434389:-1:exon
so has part: feature:434110-434223:-1:exon
so has part: feature:433958-433970:-1:exon
so has part: feature:433729-433827:-1:exon
so has part: feature:433595-433637:-1:exon
so has part: feature:432943-433048:-1:exon
so has part: feature:432714-432854:-1:exon
so has part: feature:431954-431983:-1:exon
so has part: feature:431315-431375:-1:exon
so has part: feature:431040-431078:-1:exon
so has part: feature:430210-430381:-1:exon
so has part: feature:430035-430131:-1:exon
so has part: feature:429480-429491:-1:exon
so has part: feature:429055-429192:-1:exon
so has part: feature:428138-428319:-1:exon
so has part: feature:427339-427485:-1:exon
so has part: feature:427171-427253:-1:exon
so has part: feature:426319-426444:-1:exon
so has part: feature:425720-425834:-1:exon
so has part: feature:424805-424905:-1:exon
so has part: feature:424333-424410:-1:exon
so has part: feature:423637-423712:-1:exon
so has part: feature:423324-423491:-1:exon
so has part: feature:422386-422473:-1:exon
so has part: feature:421953-422060:-1:exon
so has part: feature:421303-421361:-1:exon
so has part: feature:420350-420486:-1:exon

XP_041568293.1
type: Protein
SIO_000068: ncbiprotein

position:435114:-1
position: 435114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:435110-435114:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:434327-434389:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:434110-434223:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:433958-433970:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:433729-433827:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:433595-433637:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:432943-433048:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:432714-432854:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:431954-431983:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:431315-431375:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:431040-431078:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:430210-430381:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:430035-430131:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:429480-429491:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:429055-429192:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:428138-428319:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:427339-427485:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:427171-427253:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:426319-426444:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:425720-425834:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:424805-424905:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:424333-424410:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:423637-423712:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:423324-423491:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:422386-422473:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:421953-422060:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:421303-421361:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:420350-420486:-1:exon

CD79A
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: CD79A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 436459..450701
location: region:436459-450701:1
so has part: feature:436459-450701:1:exon
subclass of: SO_0000010

121468570
type: Gene
SIO_000068: ncbigene

position:436459:1
position: 436459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:450701:1
position: 450701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:436459-450701:1:exon

CD79A
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 59729
gene: CD79A
product: CD79a molecule, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_005978487.1
SIO_010081: CD79A
so part of: CD79A
location: join(436459..436652,437411..437631,444168..444375,446080..446198,448290..448358,448453..448628,450612..450701)
location: region:436459-450701:1
so has part: feature:436459-436652:1:exon
so has part: feature:437411-437631:1:exon
so has part: feature:444168-444375:1:exon
so has part: feature:446080-446198:1:exon
so has part: feature:448290-448358:1:exon
so has part: feature:448453-448628:1:exon
so has part: feature:450612-450701:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:436459-436652:1:exon

position:436652:1
position: 436652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:437411-437631:1:exon

position:437411:1
position: 437411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:437631:1
position: 437631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:444168-444375:1:exon

position:444168:1
position: 444168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:444375:1
position: 444375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:446080-446198:1:exon

position:446080:1
position: 446080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:446198:1
position: 446198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:448290-448358:1:exon

position:448290:1
position: 448290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:448358:1
position: 448358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:448453-448628:1:exon

position:448453:1
position: 448453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:448628:1
position: 448628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:450612-450701:1:exon

position:450612:1
position: 450612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CD79A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: CD79A
product: CD79a molecule, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041712365.1
SIO_010081: CD79A
subclass of: SO_0000673
so part of: CD79A
location: join(436459..436652,437411..437631,444168..444375,446080..446198,448290..448358,448453..448597,450600..450701)
location: region:436459-450701:1
so has part: feature:436459-436652:1:exon
so has part: feature:437411-437631:1:exon
so has part: feature:444168-444375:1:exon
so has part: feature:446080-446198:1:exon
so has part: feature:448290-448358:1:exon
so has part: feature:448453-448597:1:exon
so has part: feature:450600-450701:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:436459-436652:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:437411-437631:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:444168-444375:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:446080-446198:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:448290-448358:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:448453-448597:1:exon

position:448597:1
position: 448597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:450600-450701:1:exon

position:450600:1
position: 450600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CD79A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: CD79A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: B-cell antigen receptor complex-associated protein alpha chain
translation: MAAAPQIRGAPPKRGVPSPLLILLLLLLLLLPGSQCHNGSFPPPPTPHAETPPPLTLPTRPGGSSCGSWGGVRVWPVPTSLSAAPGAALSLECRFEPEDANVTWLQVCPRGRAGGCRWPEELPALGGGRQVMGGVPGVSRLSFEPLERNHSGLYLCRVSSGNASAQSCGTFVRVREPVPVPFLDLADATKNRILTAQGALLLLCAAGPGLLLLFRKRWANERLLQPKKISLEEENLYEGLNLDECSMYEDISRGVQPTYQDVGTPPAAEGLLEKP
SIO_010081: CD79A
subclass of: SO_0000673
so part of: CD79A
location: join(436556..436652,437411..437631,444168..444375,446080..446198,448290..448358,448453..448566)
location: region:436556-448566:1
so has part: feature:436556-436652:1:exon
so has part: feature:437411-437631:1:exon
so has part: feature:444168-444375:1:exon
so has part: feature:446080-446198:1:exon
so has part: feature:448290-448358:1:exon
so has part: feature:448453-448566:1:exon

XP_041568299.1
type: Protein
SIO_000068: ncbiprotein

position:436556:1
position: 436556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:448566:1
position: 448566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:436556-436652:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:437411-437631:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:444168-444375:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:446080-446198:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:448290-448358:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:448453-448566:1:exon

LOC121468586
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121468586
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 454200..454903
location: region:454200-454903:1
so has part: feature:454200-454903:1:exon
subclass of: SO_0000010

121468586
type: Gene
SIO_000068: ncbigene

position:454200:1
position: 454200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:454903:1
position: 454903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:454200-454903:1:exon

LOC121468586
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC121468586
product: phosphopantothenoylcysteine decarboxylase subunit SIS2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 88% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041712397.1
SIO_010081: LOC121468586
subclass of: SO_0000673
so part of: LOC121468586
location: join(454200..454334,454365..454733,454836..454845,454899..454903)
location: region:454200-454903:1
so has part: feature:454200-454334:1:exon
so has part: feature:454365-454733:1:exon
so has part: feature:454836-454845:1:exon
so has part: feature:454899-454903:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:454200-454334:1:exon

position:454334:1
position: 454334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:454365-454733:1:exon

position:454365:1
position: 454365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:454733:1
position: 454733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:454836-454845:1:exon

position:454836:1
position: 454836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:454845:1
position: 454845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:454899-454903:1:exon

position:454899:1
position: 454899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121468586
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC121468586
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphopantothenoylcysteine decarboxylase subunit SIS2-like
translation: MVRPKPQWNFSLRWLMRMMMVRMTMTITGITKLRMMKMMKMMKMKMRMMKMKVSADGEAEAAVELLLAVVDEDDDGEDDDVNNEARDEDEAQDEDEDDEDEGQDDEDEDEDDDDEAQPMVRPKPQWNFSLRWLMRMMMVRMTITGITKLGMKMKLGTKMKVMKMMKMKDDDG
SIO_010081: LOC121468586
subclass of: SO_0000673
so part of: LOC121468586
location: join(454200..454334,454365..454733,454836..454845,454899..454903)
location: region:454200-454903:1
so has part: feature:454200-454334:1:exon
so has part: feature:454365-454733:1:exon
so has part: feature:454836-454845:1:exon
so has part: feature:454899-454903:1:exon

XP_041568331.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:454200-454334:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:454365-454733:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:454836-454845:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:454899-454903:1:exon

TOMM40
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: TOMM40
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(454575..472784)
location: region:454575-472784:-1
so has part: feature:454575-472784:-1:exon
subclass of: SO_0000010

121468569
type: Gene
SIO_000068: ncbigene

position:454575:-1
position: 454575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:472784:-1
position: 472784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:454575-472784:-1:exon

TOMM40
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: TOMM40
product: translocase of outer mitochondrial membrane 40, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_041712364.1
SIO_010081: TOMM40
subclass of: SO_0000673
so part of: TOMM40
location: complement(join(454575..455714,457059..457161,458944..459020,462403..462525,464544..464649,467047..467148,467908..468000,469266..469333,472241..472440,472706..472784))
location: region:454575-472784:-1
so has part: feature:472706-472784:-1:exon
so has part: feature:472241-472440:-1:exon
so has part: feature:469266-469333:-1:exon
so has part: feature:467908-468000:-1:exon
so has part: feature:467047-467148:-1:exon
so has part: feature:464544-464649:-1:exon
so has part: feature:462403-462525:-1:exon
so has part: feature:458944-459020:-1:exon
so has part: feature:457059-457161:-1:exon
so has part: feature:454575-455714:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:472706-472784:-1:exon

position:472706:-1
position: 472706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:472241-472440:-1:exon

position:472241:-1
position: 472241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:472440:-1
position: 472440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:469266-469333:-1:exon

position:469266:-1
position: 469266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:469333:-1
position: 469333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:467908-468000:-1:exon

position:467908:-1
position: 467908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:468000:-1
position: 468000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:467047-467148:-1:exon

position:467047:-1
position: 467047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:467148:-1
position: 467148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:464544-464649:-1:exon

position:464544:-1
position: 464544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:464649:-1
position: 464649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:462403-462525:-1:exon

position:462403:-1
position: 462403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:462525:-1
position: 462525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:458944-459020:-1:exon

position:458944:-1
position: 458944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:459020:-1
position: 459020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:457059-457161:-1:exon

position:457059:-1
position: 457059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:457161:-1
position: 457161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:454575-455714:-1:exon

position:455714:-1
position: 455714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TOMM40
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: TOMM40
product: translocase of outer mitochondrial membrane 40, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 51 samples with support for all annotated introns
transcript id: XM_041712363.1
SIO_010081: TOMM40
subclass of: SO_0000673
so part of: TOMM40
location: complement(join(454575..455052,455614..455714,457059..457161,458944..459020,462403..462525,464544..464649,467047..467148,467908..468000,469266..469333,472241..472665))
location: region:454575-472665:-1
so has part: feature:472241-472665:-1:exon
so has part: feature:469266-469333:-1:exon
so has part: feature:467908-468000:-1:exon
so has part: feature:467047-467148:-1:exon
so has part: feature:464544-464649:-1:exon
so has part: feature:462403-462525:-1:exon
so has part: feature:458944-459020:-1:exon
so has part: feature:457059-457161:-1:exon
so has part: feature:455614-455714:-1:exon
so has part: feature:454575-455052:-1:exon

position:472665:-1
position: 472665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:472241-472665:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:469266-469333:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:467908-468000:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:467047-467148:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:464544-464649:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:462403-462525:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:458944-459020:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:457059-457161:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:455614-455714:-1:exon

position:455614:-1
position: 455614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:454575-455052:-1:exon

position:455052:-1
position: 455052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TOMM40
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: TOMM40
product: translocase of outer mitochondrial membrane 40, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 92 samples with support for all annotated introns
transcript id: XM_041712362.1
SIO_010081: TOMM40
subclass of: SO_0000673
so part of: TOMM40
location: complement(join(454575..455428,455614..455714,457059..457161,458944..459020,462403..462525,464544..464649,467047..467148,467908..468000,469266..469333,472241..472664))
location: region:454575-472664:-1
so has part: feature:472241-472664:-1:exon
so has part: feature:469266-469333:-1:exon
so has part: feature:467908-468000:-1:exon
so has part: feature:467047-467148:-1:exon
so has part: feature:464544-464649:-1:exon
so has part: feature:462403-462525:-1:exon
so has part: feature:458944-459020:-1:exon
so has part: feature:457059-457161:-1:exon
so has part: feature:455614-455714:-1:exon
so has part: feature:454575-455428:-1:exon

position:472664:-1
position: 472664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:472241-472664:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:469266-469333:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:467908-468000:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:467047-467148:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:464544-464649:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:462403-462525:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:458944-459020:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:457059-457161:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:455614-455714:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:454575-455428:-1:exon

position:455428:-1
position: 455428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TOMM40
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: TOMM40
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial import receptor subunit TOM40 homolog isoform X2
translation: MGNVWAAGSPPPPLLPVPPPGFAAPPPLSGVGGGAPLPPRPPEGGEPLPNPGAFEECHRRCKELFPVQMEGVKLTVNKGLSNHFQVNHTVALSTLGESNYHFGATYVGTKHLSPTEAFPVLVGDMDNSGSLNAQVVHQVSSRIRSKIAFQTQQSKFVNWQVDGEYRGGDFTAALTLGNPDILMGSGILVAHYLQSVTPALALGAELVYHRRPGEEGAVLSLAGRYSAPSWIGTVTLGQAGAHLTYYHRASEQLQVGVEFEASTRLQDSSVAFGYQLELPRGNLLFRGSLDSSWQVGAVLEKKLPPLPLTLALGAFINHRKEKFHCGFGLTIG
SIO_010081: TOMM40
subclass of: SO_0000673
so part of: TOMM40
location: complement(join(455014..455052,455614..455714,457059..457161,458944..459020,462403..462525,464544..464649,467047..467148,467908..468000,469266..469333,472241..472427))
location: region:455014-472427:-1
so has part: feature:472241-472427:-1:exon
so has part: feature:469266-469333:-1:exon
so has part: feature:467908-468000:-1:exon
so has part: feature:467047-467148:-1:exon
so has part: feature:464544-464649:-1:exon
so has part: feature:462403-462525:-1:exon
so has part: feature:458944-459020:-1:exon
so has part: feature:457059-457161:-1:exon
so has part: feature:455614-455714:-1:exon
so has part: feature:455014-455052:-1:exon

XP_041568297.1
type: Protein
SIO_000068: ncbiprotein

position:455014:-1
position: 455014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:472427:-1
position: 472427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:472241-472427:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:469266-469333:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:467908-468000:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:467047-467148:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:464544-464649:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:462403-462525:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:458944-459020:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:457059-457161:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:455614-455714:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:455014-455052:-1:exon

TOMM40
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: TOMM40
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial import receptor subunit TOM40 homolog isoform X1
translation: MGNVWAAGSPPPPLLPVPPPGFAAPPPLSGVGGGAPLPPRPPEGGEPLPNPGAFEECHRRCKELFPVQMEGVKLTVNKGLSNHFQVNHTVALSTLGESNYHFGATYVGTKHLSPTEAFPVLVGDMDNSGSLNAQVVHQVSSRIRSKIAFQTQQSKFVNWQVDGEYRGGDFTAALTLGNPDILMGSGILVAHYLQSVTPALALGAELVYHRRPGEEGAVLSLAGRYSAPSWIGTVTLGQAGAHLTYYHRASEQLQVGVEFEASTRLQDSSVAFGYQLELPRGNLLFRGSLDSSWQVGAVLEKKLPPLPLTLALGAFINHRKEKFHCGFGLTIG
SIO_010081: TOMM40
subclass of: SO_0000673
so part of: TOMM40
location: complement(join(455390..455428,455614..455714,457059..457161,458944..459020,462403..462525,464544..464649,467047..467148,467908..468000,469266..469333,472241..472427))
location: region:455390-472427:-1
so has part: feature:472241-472427:-1:exon
so has part: feature:469266-469333:-1:exon
so has part: feature:467908-468000:-1:exon
so has part: feature:467047-467148:-1:exon
so has part: feature:464544-464649:-1:exon
so has part: feature:462403-462525:-1:exon
so has part: feature:458944-459020:-1:exon
so has part: feature:457059-457161:-1:exon
so has part: feature:455614-455714:-1:exon
so has part: feature:455390-455428:-1:exon

XP_041568296.1
type: Protein
SIO_000068: ncbiprotein

position:455390:-1
position: 455390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:472241-472427:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:469266-469333:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:467908-468000:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:467047-467148:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:464544-464649:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:462403-462525:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:458944-459020:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:457059-457161:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:455614-455714:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:455390-455428:-1:exon

TOMM40
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: TOMM40
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial import receptor subunit TOM40 homolog isoform X3
translation: MGNVWAAGSPPPPLLPVPPPGFAAPPPLSGVGGGAPLPPRPPEGGEPLPNPGAFEECHRRCKELFPVQMEGVKLTVNKGLSNHFQVNHTVALSTLGESNYHFGATYVGTKHLSPTEAFPVLVGDMDNSGSLNAQVVHQVSSRIRSKIAFQTQQSKFVNWQVDGEYRGGDFTAALTLGNPDILMGSGILVAHYLQSVTPALALGAELVYHRRPGEEGAVLSLAGRYSAPSWIGTVTLGQAGAHLTYYHRASEQLQVGVEFEASTRLQDSSVAFGYQLELPRGNLLFRGSLDSSWQVGAVLEKKLPPLPLTLALGAFINHRKEKFHCGFGLTIG
SIO_010081: TOMM40
subclass of: SO_0000673
so part of: TOMM40
location: complement(join(455575..455714,457059..457161,458944..459020,462403..462525,464544..464649,467047..467148,467908..468000,469266..469333,472241..472427))
location: region:455575-472427:-1
so has part: feature:472241-472427:-1:exon
so has part: feature:469266-469333:-1:exon
so has part: feature:467908-468000:-1:exon
so has part: feature:467047-467148:-1:exon
so has part: feature:464544-464649:-1:exon
so has part: feature:462403-462525:-1:exon
so has part: feature:458944-459020:-1:exon
so has part: feature:457059-457161:-1:exon
so has part: feature:455575-455714:-1:exon

XP_041568298.1
type: Protein
SIO_000068: ncbiprotein

position:455575:-1
position: 455575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:472241-472427:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:469266-469333:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:467908-468000:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:467047-467148:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:464544-464649:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:462403-462525:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:458944-459020:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:457059-457161:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:455575-455714:-1:exon

TMEM145
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: TMEM145
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(476678..501517)
location: region:476678-501517:-1
so has part: feature:476678-501517:-1:exon
subclass of: SO_0000010

121468587
type: Gene
SIO_000068: ncbigene

position:476678:-1
position: 476678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:501517:-1
position: 501517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:476678-501517:-1:exon

TMEM145
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: TMEM145
product: transmembrane protein 145
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_041712399.1
SIO_010081: TMEM145
subclass of: SO_0000673
so part of: TMEM145
location: complement(join(476678..476905,477799..477945,479984..480104,482388..482560,484229..484322,485545..485623,486934..487014,489160..489228,491719..491790,493162..493246,494442..494543,495704..495790,497382..497459,499826..499900,501341..501517))
location: region:476678-501517:-1
so has part: feature:501341-501517:-1:exon
so has part: feature:499826-499900:-1:exon
so has part: feature:497382-497459:-1:exon
so has part: feature:495704-495790:-1:exon
so has part: feature:494442-494543:-1:exon
so has part: feature:493162-493246:-1:exon
so has part: feature:491719-491790:-1:exon
so has part: feature:489160-489228:-1:exon
so has part: feature:486934-487014:-1:exon
so has part: feature:485545-485623:-1:exon
so has part: feature:484229-484322:-1:exon
so has part: feature:482388-482560:-1:exon
so has part: feature:479984-480104:-1:exon
so has part: feature:477799-477945:-1:exon
so has part: feature:476678-476905:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:501341-501517:-1:exon

position:501341:-1
position: 501341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:499826-499900:-1:exon

position:499826:-1
position: 499826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:499900:-1
position: 499900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:497382-497459:-1:exon

position:497382:-1
position: 497382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:497459:-1
position: 497459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:495704-495790:-1:exon

position:495704:-1
position: 495704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:495790:-1
position: 495790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:494442-494543:-1:exon

position:494442:-1
position: 494442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:494543:-1
position: 494543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:493162-493246:-1:exon

position:493162:-1
position: 493162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:493246:-1
position: 493246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:491719-491790:-1:exon

position:491719:-1
position: 491719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:491790:-1
position: 491790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:489160-489228:-1:exon

position:489160:-1
position: 489160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:489228:-1
position: 489228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:486934-487014:-1:exon

position:486934:-1
position: 486934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:487014:-1
position: 487014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:485545-485623:-1:exon

position:485545:-1
position: 485545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:485623:-1
position: 485623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:484229-484322:-1:exon

position:484229:-1
position: 484229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:484322:-1
position: 484322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:482388-482560:-1:exon

position:482388:-1
position: 482388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:482560:-1
position: 482560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:479984-480104:-1:exon

position:479984:-1
position: 479984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:480104:-1
position: 480104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:477799-477945:-1:exon

position:477799:-1
position: 477799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:477945:-1
position: 477945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:476678-476905:-1:exon

position:476905:-1
position: 476905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TMEM145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: TMEM145
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 145
translation: MGLPGLLGGPGGVAGVLGGPGGVPGGSRGGSPALLPLLLLLLPARAAPKYVRGRISTKEDWVFLTRFCFLSDFGRLDFHFRYPEAKCCQNILLYFDDPSQWPAVYRRGGKDCLAKESVIRPENNQVINLTTQYAWSGCQVLPGVSGRVLSCSSGRSFRSVRERWWYVALSKCGGGGLELEYEMVLTNGDSFWTRHFSADEFGILETDITFLLIFILIFLLSCYCGYQLKGRQLLHTTYKMFMAAAGLEVLSLLLSCAYWGQYGCDGVGHGPLKLLGKLLFSISFLIFLLMLILLGKGFSVTRGRISAGGSVRLSVYMTLYSLTHVALLTYEAQFFDPGQVLYTYESPAGYGLIALQFGAFGWFCAAVGATLSAVPERRRFYLPFLAAYAFWFLAVPVSALVANFGIPKWAREKIVNGIQLGTHLYAHGVFLLLTRPSAANKNFPFHVRRAQIGPGGGGAAPGPSPTRGYRNVSFVGDGGGGFTELFVIPPPGPQPVRFGVKNTDFGKKWEKTPKNGEKRGKTPKNGKKYLKLGRKVTKIGRNGGNTAQCE
SIO_010081: TMEM145
subclass of: SO_0000673
so part of: TMEM145
location: complement(join(476693..476905,477799..477945,479984..480104,482388..482560,484229..484322,485545..485623,486934..487014,489160..489228,491719..491790,493162..493246,494442..494543,495704..495790,497382..497459,499826..499900,501341..501517))
location: region:476693-501517:-1
so has part: feature:501341-501517:-1:exon
so has part: feature:499826-499900:-1:exon
so has part: feature:497382-497459:-1:exon
so has part: feature:495704-495790:-1:exon
so has part: feature:494442-494543:-1:exon
so has part: feature:493162-493246:-1:exon
so has part: feature:491719-491790:-1:exon
so has part: feature:489160-489228:-1:exon
so has part: feature:486934-487014:-1:exon
so has part: feature:485545-485623:-1:exon
so has part: feature:484229-484322:-1:exon
so has part: feature:482388-482560:-1:exon
so has part: feature:479984-480104:-1:exon
so has part: feature:477799-477945:-1:exon
so has part: feature:476693-476905:-1:exon

XP_041568333.1
type: Protein
SIO_000068: ncbiprotein

position:476693:-1
position: 476693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:501341-501517:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:499826-499900:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:497382-497459:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:495704-495790:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:494442-494543:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:493162-493246:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:491719-491790:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:489160-489228:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:486934-487014:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:485545-485623:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:484229-484322:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:482388-482560:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:479984-480104:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:477799-477945:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:476693-476905:-1:exon

LOC121468588
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121468588
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 503303..596378
location: region:503303-596378:1
so has part: feature:503303-596378:1:exon
subclass of: SO_0000010

121468588
type: Gene
SIO_000068: ncbigene

position:503303:1
position: 503303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:596378:1
position: 596378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:503303-596378:1:exon

LOC121468588
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC121468588
product: multiple epidermal growth factor-like domains protein 8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 67% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041712400.1
SIO_010081: LOC121468588
subclass of: SO_0000673
so part of: LOC121468588
location: join(503303..503481,506408..506605,508893..509056,511676..511885,515953..516133,518948..519045,521533..521797,524569..524749,526343..526503,528492..528658,531441..531579,532958..533103,535253..535300,537257..537416,539920..540083,543370..543555,548655..548911,549470..549575,550956..551289,557134..557368,559423..559537,562983..563193,568654..568868,571205..571269,571322..571470,573463..573625,576361..576553,582871..583041,584385..584515,587570..587687,590514..591227,591286..593456,593558..594194,596004..596378)
location: region:503303-596378:1
so has part: feature:503303-503481:1:exon
so has part: feature:506408-506605:1:exon
so has part: feature:508893-509056:1:exon
so has part: feature:511676-511885:1:exon
so has part: feature:515953-516133:1:exon
so has part: feature:518948-519045:1:exon
so has part: feature:521533-521797:1:exon
so has part: feature:524569-524749:1:exon
so has part: feature:526343-526503:1:exon
so has part: feature:528492-528658:1:exon
so has part: feature:531441-531579:1:exon
so has part: feature:532958-533103:1:exon
so has part: feature:535253-535300:1:exon
so has part: feature:537257-537416:1:exon
so has part: feature:539920-540083:1:exon
so has part: feature:543370-543555:1:exon
so has part: feature:548655-548911:1:exon
so has part: feature:549470-549575:1:exon
so has part: feature:550956-551289:1:exon
so has part: feature:557134-557368:1:exon
so has part: feature:559423-559537:1:exon
so has part: feature:562983-563193:1:exon
so has part: feature:568654-568868:1:exon
so has part: feature:571205-571269:1:exon
so has part: feature:571322-571470:1:exon
so has part: feature:573463-573625:1:exon
so has part: feature:576361-576553:1:exon
so has part: feature:582871-583041:1:exon
so has part: feature:584385-584515:1:exon
so has part: feature:587570-587687:1:exon
so has part: feature:590514-591227:1:exon
so has part: feature:591286-593456:1:exon
so has part: feature:593558-594194:1:exon
so has part: feature:596004-596378:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:503303-503481:1:exon

position:503481:1
position: 503481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:506408-506605:1:exon

position:506408:1
position: 506408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:506605:1
position: 506605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:508893-509056:1:exon

position:508893:1
position: 508893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:509056:1
position: 509056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:511676-511885:1:exon

position:511676:1
position: 511676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:511885:1
position: 511885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:515953-516133:1:exon

position:515953:1
position: 515953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:516133:1
position: 516133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:518948-519045:1:exon

position:518948:1
position: 518948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:519045:1
position: 519045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:521533-521797:1:exon

position:521533:1
position: 521533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:521797:1
position: 521797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:524569-524749:1:exon

position:524569:1
position: 524569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:524749:1
position: 524749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:526343-526503:1:exon

position:526343:1
position: 526343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:526503:1
position: 526503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:528492-528658:1:exon

position:528492:1
position: 528492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:528658:1
position: 528658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:531441-531579:1:exon

position:531441:1
position: 531441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:531579:1
position: 531579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:532958-533103:1:exon

position:532958:1
position: 532958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:533103:1
position: 533103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:535253-535300:1:exon

position:535253:1
position: 535253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:535300:1
position: 535300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:537257-537416:1:exon

position:537257:1
position: 537257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:537416:1
position: 537416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:539920-540083:1:exon

position:539920:1
position: 539920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:540083:1
position: 540083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:543370-543555:1:exon

position:543370:1
position: 543370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:543555:1
position: 543555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:548655-548911:1:exon

position:548655:1
position: 548655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:548911:1
position: 548911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:549470-549575:1:exon

position:549470:1
position: 549470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:549575:1
position: 549575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:550956-551289:1:exon

position:550956:1
position: 550956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:551289:1
position: 551289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:557134-557368:1:exon

position:557134:1
position: 557134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:557368:1
position: 557368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:559423-559537:1:exon

position:559423:1
position: 559423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:559537:1
position: 559537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:562983-563193:1:exon

position:562983:1
position: 562983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:563193:1
position: 563193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:568654-568868:1:exon

position:568654:1
position: 568654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:568868:1
position: 568868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:571205-571269:1:exon

position:571205:1
position: 571205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:571269:1
position: 571269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:571322-571470:1:exon

position:571322:1
position: 571322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:571470:1
position: 571470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:573463-573625:1:exon

position:573463:1
position: 573463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:573625:1
position: 573625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:576361-576553:1:exon

position:576361:1
position: 576361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:576553:1
position: 576553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:582871-583041:1:exon

position:582871:1
position: 582871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:583041:1
position: 583041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:584385-584515:1:exon

position:584385:1
position: 584385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:584515:1
position: 584515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:587570-587687:1:exon

position:587570:1
position: 587570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:587687:1
position: 587687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:590514-591227:1:exon

position:590514:1
position: 590514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:591227:1
position: 591227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:591286-593456:1:exon

position:591286:1
position: 591286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:593456:1
position: 593456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:593558-594194:1:exon

position:593558:1
position: 593558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:594194:1
position: 594194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:596004-596378:1:exon

position:596004:1
position: 596004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121468588
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC121468588
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: multiple epidermal growth factor-like domains protein 8
translation: MGVPGALFLGLFWVFFGVPPRAGAGDCKGQRQILTGPRGFVTDGPGNYSVNGNCEWLIQAPSPRHRILLSFTFMDTECTYDYLFVYDGASTRSPLLAALSGSSLPAPLEATSGQMLLHLFSDANYNLLGFNASWRLSLCPGGCSGRGRCVPPGLCRCAPGWAGPACTARSCSAHCRPPGGACNQETGACECRAGFLGFSCDLRLGDPRGGGRWYRLSDGDPQFRPRAAAAGAVLPGTGMLYVFGGLDLNEALGDLVRYNFSSNRWERIPETPGSPAPAARHSHSAVAWGDTLLIFGGQLRGGALTNDLWGWGPPEEGRGSPEEGRGSPGGGWRLLQPPQNGAHGPPGLAGHAAALVDGDWLYVFGGRTSSDVFSPDLFRLLLPGGPWERVGVWGGKAPRAAGHALLFLPHARSLLVYGGHRPSTARFSVRVNSSDLFHLERRHWSSLRARGEFGGGSQGGPRERAFHSASLIGDYMVVFGGNVHTHYHEEKCYEEELHFYHLRCHRWSRAQPLRLGHGAGKNGRKSGKLGSGGKWLGENWGEFGWKMGENWGNLGENWEELHFYHLRCHRWSRAQPLRLGHEAGTPGEGRYSHVSGVLAGQVLLVAGGFSGVPRGDLRAYKVPSFVLQRSEEPDPNCGSSGTNPEQCPPGPCPGLSRLLGDCESCLAFGGEPQNPPGPDSPAPPRFGWCVQNDTCVPLAERSRCRVGQISGTHGWWGPRADFLTELPQCRSRGVPPGLHLLTFQHPKNESQPDKVSLIRSATITLTPPGDAAVALQFRGFLHPLLGPAGPGPNVWARIQRLAVVARLAREPNSTELEEVGRWGAQQERETRALRRPRPERLFGRAARGSRFLLQVEALLNASGGQSSELTLTWDRTGVPGGSVSARKKSGIFGEFLGIFSGVVSEVAKQVEALLNASGGQSSELTLTWDRTGVPGGSSLVGPPKSWGVSGSLFGVVLGSFNEILFQFLGFFLGFFLGCFESGVSGFFWGGSLTFWGSPPQPRPHYFHAAAILGDTLVVVGGRSDRRDFGNDVLLYQIRCNAWILPPHTEPSVVGPPMPGAVGHALAQLGGLLFLSGGFNGGVLGGLWGLRVPPEPCGALPDPQRCNGSGGACAWCGGRCRGALEAERLGCSPIPAPCAPSPRDPHECRRLRSCSECLAQHPLGGAGPPACKWCTNCPEGACIGAGSSCRRENDCRINQREIFAPQNCSEAACGAPDCPRCASAGRCMWTRQFKRTGETRRILSVQPAYEWTCFSHSLLNVSPMPVESAPPLPCPRPCHLQRTCAACLASAGADGGWQHCLWSLALRQCLSPSFAPLLCLAGGCGRLLRGPERCPSPPECGGASQCSQCLRRPRCGWCARGGHSGAGRCLQGGISGPLKGASETCGPGEVWAFLSCPPEDECENGHHTCGPSQVCRDLPDGFTCACREGFSPDSRTGECRPVCRQGCANGTCVEPDRCRCHFGFVGSDCGVTCACNGHSDCAGPRATDTCLQCHNNTQGPQCQRCRPLFVGSALGGGTCLTCRSFCRHRADVCLSRADLERHRRQPDRYPLEPHLIHTWVQEGPSEAQAVCVNCQNNSVGDRCDTCRAGFFLLDGTCTRCQCNGHADTCNELDGTGCPCQNNTESGACPERRDCHRHQCSKCRDSFQGHPVGGQQCYRLLAVEQEYCLDAASQSHCFPPPQRRPLPPGRSVPFAVQPKFTNVDIRLTLDVTFGVVDLYVATSYDTFAVDMEPDTGWHRVRVQAPGGGGGTFGGGGGTFGTLGGQGGGGGTFGGGGGTFGTLGGQGGQGGGGGGGGGGTFGGGGGTFGGQGSGGGTFGGGGGTFGTLGGQGGGGGGGGGGGTFGGQGGGGGTFGGGGGTFGTSGTGGGTFGGQGGQGEDKGDKGVVVGLVALVVAPLGPWGDKEDKGDKGVVVAPLGLVVAPLGLPELVVAPLGPSGDKGVVGVVVAPLGPLVALVTPLGHLGLEMVVVAPLGPSVALVALWPVGLVPLVQPVLPVTPKVLV…
SIO_010081: LOC121468588
subclass of: SO_0000673
so part of: LOC121468588
location: join(506428..506605,508893..509056,511676..511885,515953..516133,518948..519045,521533..521797,524569..524749,526343..526503,528492..528658,531441..531579,532958..533103,535253..535300,537257..537416,539920..540083,543370..543555,548655..548911,549470..549575,550956..551289,557134..557368,559423..559537,562983..563193,568654..568868,571205..571269,571322..571470,573463..573625,576361..576553,582871..583041,584385..584515,587570..587687,590514..591227,591286..593456,593558..594194,596004..596375)
location: region:506428-596375:1
so has part: feature:506428-506605:1:exon
so has part: feature:508893-509056:1:exon
so has part: feature:511676-511885:1:exon
so has part: feature:515953-516133:1:exon
so has part: feature:518948-519045:1:exon
so has part: feature:521533-521797:1:exon
so has part: feature:524569-524749:1:exon
so has part: feature:526343-526503:1:exon
so has part: feature:528492-528658:1:exon
so has part: feature:531441-531579:1:exon
so has part: feature:532958-533103:1:exon
so has part: feature:535253-535300:1:exon
so has part: feature:537257-537416:1:exon
so has part: feature:539920-540083:1:exon
so has part: feature:543370-543555:1:exon
so has part: feature:548655-548911:1:exon
so has part: feature:549470-549575:1:exon
so has part: feature:550956-551289:1:exon
so has part: feature:557134-557368:1:exon
so has part: feature:559423-559537:1:exon
so has part: feature:562983-563193:1:exon
so has part: feature:568654-568868:1:exon
so has part: feature:571205-571269:1:exon
so has part: feature:571322-571470:1:exon
so has part: feature:573463-573625:1:exon
so has part: feature:576361-576553:1:exon
so has part: feature:582871-583041:1:exon
so has part: feature:584385-584515:1:exon
so has part: feature:587570-587687:1:exon
so has part: feature:590514-591227:1:exon
so has part: feature:591286-593456:1:exon
so has part: feature:593558-594194:1:exon
so has part: feature:596004-596375:1:exon

XP_041568334.1
type: Protein
SIO_000068: ncbiprotein

position:506428:1
position: 506428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:596375:1
position: 596375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:506428-506605:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:508893-509056:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:511676-511885:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:515953-516133:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:518948-519045:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:521533-521797:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:524569-524749:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:526343-526503:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:528492-528658:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:531441-531579:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:532958-533103:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:535253-535300:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:537257-537416:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:539920-540083:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:543370-543555:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:548655-548911:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:549470-549575:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:550956-551289:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:557134-557368:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:559423-559537:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:562983-563193:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:568654-568868:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:571205-571269:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:571322-571470:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:573463-573625:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:576361-576553:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:582871-583041:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:584385-584515:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:587570-587687:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:590514-591227:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:591286-593456:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:593558-594194:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:596004-596375:1:exon

LOC121468571
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121468571
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 545096..548524
location: region:545096-548524:1
so has part: feature:545096-548524:1:exon
subclass of: SO_0000011

121468571
type: Gene
SIO_000068: ncbigene

position:545096:1
position: 545096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:548524:1
position: 548524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:545096-548524:1:exon

LOC121468571
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC121468571
product: uncharacterized LOC121468571
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XR_005978488.1
SIO_010081: LOC121468571
subclass of: SO_0000673
so part of: LOC121468571
location: join(545096..547334,547657..548524)
location: region:545096-548524:1
so has part: feature:545096-547334:1:exon
so has part: feature:547657-548524:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:545096-547334:1:exon

position:547334:1
position: 547334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:547657-548524:1:exon

position:547657:1
position: 547657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121468605
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121468605
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(600495..603180)
location: region:600495-603180:-1
so has part: feature:600495-603180:-1:exon
subclass of: SO_0000010

121468605
type: Gene
SIO_000068: ncbigene

position:600495:-1
position: 600495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:603180:-1
position: 603180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:600495-603180:-1:exon

LOC121468605
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC121468605
product: hormone-sensitive lipase-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_041712430.1
SIO_010081: LOC121468605
subclass of: SO_0000673
so part of: LOC121468605
location: complement(join(600495..600751,601149..601302,602958..603180))
location: region:600495-603180:-1
so has part: feature:602958-603180:-1:exon
so has part: feature:601149-601302:-1:exon
so has part: feature:600495-600751:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:602958-603180:-1:exon

position:602958:-1
position: 602958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:601149-601302:-1:exon

position:601149:-1
position: 601149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:601302:-1
position: 601302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:600495-600751:-1:exon

position:600751:-1
position: 600751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121468605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC121468605
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hormone-sensitive lipase-like
translation: MLDDSVALARRLRALGRPVTLRVVPGVPHGFLSLAPLSPECRRAGGLRPGPDAGRFGGPGPAFTSPGPARDPSGGPGGPARVPQPRPPEPRVPPGRGPAPWTRCWTIRWPWPGVYEPWAGP
SIO_010081: LOC121468605
subclass of: SO_0000673
so part of: LOC121468605
location: complement(join(600676..600751,601149..601302,602958..603093))
location: region:600676-603093:-1
so has part: feature:602958-603093:-1:exon
so has part: feature:601149-601302:-1:exon
so has part: feature:600676-600751:-1:exon

XP_041568364.1
type: Protein
SIO_000068: ncbiprotein

position:600676:-1
position: 600676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:603093:-1
position: 603093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:602958-603093:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:601149-601302:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:600676-600751:-1:exon

LOC121468604
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121468604
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(603676..606229)
location: region:603676-606229:-1
so has part: feature:603676-606229:-1:exon
subclass of: SO_0000010

121468604
type: Gene
SIO_000068: ncbigene

position:603676:-1
position: 603676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:606229:-1
position: 606229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:603676-606229:-1:exon

LOC121468604
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC121468604
product: hormone-sensitive lipase-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_041712429.1
SIO_010081: LOC121468604
subclass of: SO_0000673
so part of: LOC121468604
location: complement(join(603676..603876,604689..604842,605996..606229))
location: region:603676-606229:-1
so has part: feature:605996-606229:-1:exon
so has part: feature:604689-604842:-1:exon
so has part: feature:603676-603876:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:605996-606229:-1:exon

position:605996:-1
position: 605996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:604689-604842:-1:exon

position:604689:-1
position: 604689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:604842:-1
position: 604842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:603676-603876:-1:exon

position:603876:-1
position: 603876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121468604
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC121468604
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hormone-sensitive lipase-like
translation: MLDDSVALARRLRALGRPVTLRVVPGVPHGFLSLAPLSPECRRAGGLRPGPDAGRFGGPGPAFTSPGPARDPSGGPGGPARVPQPRPPEPRVPPGRGPAPWTRCWTIRWPWPGVYEPWAGP
SIO_010081: LOC121468604
subclass of: SO_0000673
so part of: LOC121468604
location: complement(join(603801..603876,604689..604842,605996..606131))
location: region:603801-606131:-1
so has part: feature:605996-606131:-1:exon
so has part: feature:604689-604842:-1:exon
so has part: feature:603801-603876:-1:exon

XP_041568363.1
type: Protein
SIO_000068: ncbiprotein

position:603801:-1
position: 603801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:606131:-1
position: 606131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:605996-606131:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:604689-604842:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:603801-603876:-1:exon

LOC121468606
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121468606
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(609206..648749)
location: region:609206-648749:-1
so has part: feature:609206-648749:-1:exon
subclass of: SO_0000010

121468606
type: Gene
SIO_000068: ncbigene

position:609206:-1
position: 609206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:648749:-1
position: 648749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:609206-648749:-1:exon

LOC121468606
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 59729
gene: LOC121468606
product: hormone-sensitive lipase-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_005978500.1
SIO_010081: LOC121468606
so part of: LOC121468606
location: complement(join(609206..609429,612615..612768,613391..613544,614148..614301,614958..615111,616459..616612,617558..617711,618784..619010,621790..621925,624966..625276))
location: region:609206-625276:-1
so has part: feature:624966-625276:-1:exon
so has part: feature:621790-621925:-1:exon
so has part: feature:618784-619010:-1:exon
so has part: feature:617558-617711:-1:exon
so has part: feature:616459-616612:-1:exon
so has part: feature:614958-615111:-1:exon
so has part: feature:614148-614301:-1:exon
so has part: feature:613391-613544:-1:exon
so has part: feature:612615-612768:-1:exon
so has part: feature:609206-609429:-1:exon

position:625276:-1
position: 625276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:624966-625276:-1:exon

position:624966:-1
position: 624966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:621790-621925:-1:exon

position:621790:-1
position: 621790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:621925:-1
position: 621925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:618784-619010:-1:exon

position:618784:-1
position: 618784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:619010:-1
position: 619010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:617558-617711:-1:exon

position:617558:-1
position: 617558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:617711:-1
position: 617711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:616459-616612:-1:exon

position:616459:-1
position: 616459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:616612:-1
position: 616612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:614958-615111:-1:exon

position:614958:-1
position: 614958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:615111:-1
position: 615111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:614148-614301:-1:exon

position:614148:-1
position: 614148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:614301:-1
position: 614301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:613391-613544:-1:exon

position:613391:-1
position: 613391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:613544:-1
position: 613544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:612615-612768:-1:exon

position:612615:-1
position: 612615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:612768:-1
position: 612768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:609206-609429:-1:exon

position:609429:-1
position: 609429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121468606
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC121468606
product: hormone-sensitive lipase-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041712431.1
SIO_010081: LOC121468606
subclass of: SO_0000673
so part of: LOC121468606
location: complement(join(616674..616788,617558..617711,618784..619010,621790..621925,624966..625193,632764..633067,637386..637571,643431..643576,644713..644803,648167..648749))
location: region:616674-648749:-1
so has part: feature:648167-648749:-1:exon
so has part: feature:644713-644803:-1:exon
so has part: feature:643431-643576:-1:exon
so has part: feature:637386-637571:-1:exon
so has part: feature:632764-633067:-1:exon
so has part: feature:624966-625193:-1:exon
so has part: feature:621790-621925:-1:exon
so has part: feature:618784-619010:-1:exon
so has part: feature:617558-617711:-1:exon
so has part: feature:616674-616788:-1:exon

position:616674:-1
position: 616674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:648167-648749:-1:exon

position:648167:-1
position: 648167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:644713-644803:-1:exon

position:644713:-1
position: 644713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:644803:-1
position: 644803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:643431-643576:-1:exon

position:643431:-1
position: 643431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:643576:-1
position: 643576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:637386-637571:-1:exon

position:637386:-1
position: 637386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:637571:-1
position: 637571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:632764-633067:-1:exon

position:632764:-1
position: 632764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:633067:-1
position: 633067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:624966-625193:-1:exon

position:625193:-1
position: 625193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:621790-621925:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:618784-619010:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:617558-617711:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:616674-616788:-1:exon

position:616788:-1
position: 616788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121468606
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC121468606
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hormone-sensitive lipase-like
translation: MDLLQSLQHLANDNLTFFTPTSGTTGAAAATARRFAAAFAAILRHGRHLGPAMSHLAQVAPKFDLDESTPGNGYRSLMEVVQICVDRAVQRCRHVAAHRKSLFFRAGANAAEIEAVAAALGQLRALLVLAAKMAAAAKGGRLFPDGEDNEEEEEEEEGEEGISAVVLREYSTMHNGCFYGRCLGFQFVPSLRPFLQTLAIGLVSFGENYRNRDPGIGVAAGSLFTSGKFALDPELRGAEFERLTQNLDVHFWKSFWNLTETELLASVASLTAVQVGLCRALAVPPEPLELPLARDPSRSVTVAPPGAHLGPAPLHLRLLSYHLRQGQDSAALSALSRQDGGPWTPSPFSWRRGPPLPPSPGLLVHFHGGGFVAQTSRSHEPYLRGWARDLGTPILSVDYALAPEAPFPRALEECFYAYCWALRHCRMLGSTAERVCLAGDSAGGNLCLGVSLRAVALGVRVPQAVLAAYPVTLVQAAASPSRLLTLLDPLLPLGVLCQCLGAYAGTLGEGSRSPPPPGPPVGEGLILRGLRGGGGLAGGAPAGETPPQNRIISKLGRGKLRGPPRRFPRGPPKIFGVSRRISTPPDRGTPRDFWENSPKTPPGPFYVPPVGSGFVAGGAPPNPPGGLRPGPDAGRFGGPGPAFTSPGPARDPSGGPGGPARVPQPRPPEPRVPPGRGPAPWTRCWTIRWPQNPNKSPLKPPKISFKTP
SIO_010081: LOC121468606
subclass of: SO_0000673
so part of: LOC121468606
location: complement(join(616692..616788,617558..617711,618784..619010,621790..621925,624966..625193,632764..633067,637386..637571,643431..643576,644713..644803,648167..648724))
location: region:616692-648724:-1
so has part: feature:648167-648724:-1:exon
so has part: feature:644713-644803:-1:exon
so has part: feature:643431-643576:-1:exon
so has part: feature:637386-637571:-1:exon
so has part: feature:632764-633067:-1:exon
so has part: feature:624966-625193:-1:exon
so has part: feature:621790-621925:-1:exon
so has part: feature:618784-619010:-1:exon
so has part: feature:617558-617711:-1:exon
so has part: feature:616692-616788:-1:exon

XP_041568365.1
type: Protein
SIO_000068: ncbiprotein

position:616692:-1
position: 616692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:648724:-1
position: 648724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:648167-648724:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:644713-644803:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:643431-643576:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:637386-637571:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:632764-633067:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:624966-625193:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:621790-621925:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:618784-619010:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:617558-617711:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:616692-616788:-1:exon

PSMC4
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: PSMC4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(661665..697260)
location: region:661665-697260:-1
so has part: feature:661665-697260:-1:exon
subclass of: SO_0000010

121468598
type: Gene
SIO_000068: ncbigene

position:661665:-1
position: 661665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:697260:-1
position: 697260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:661665-697260:-1:exon

PSMC4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: PSMC4
product: proteasome 26S subunit, ATPase 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 ESTs, 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_041712421.1
SIO_010081: PSMC4
subclass of: SO_0000673
so part of: PSMC4
location: complement(join(661665..661875,664670..664725,666931..667099,672575..672651,676246..676413,679655..679748,683307..683416,687816..687962,692554..692740,694370..694459,697200..697257))
location: region:661665-697257:-1
so has part: feature:697200-697257:-1:exon
so has part: feature:694370-694459:-1:exon
so has part: feature:692554-692740:-1:exon
so has part: feature:687816-687962:-1:exon
so has part: feature:683307-683416:-1:exon
so has part: feature:679655-679748:-1:exon
so has part: feature:676246-676413:-1:exon
so has part: feature:672575-672651:-1:exon
so has part: feature:666931-667099:-1:exon
so has part: feature:664670-664725:-1:exon
so has part: feature:661665-661875:-1:exon

position:697257:-1
position: 697257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:697200-697257:-1:exon

position:697200:-1
position: 697200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:694370-694459:-1:exon

position:694370:-1
position: 694370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:694459:-1
position: 694459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:692554-692740:-1:exon

position:692554:-1
position: 692554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:692740:-1
position: 692740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:687816-687962:-1:exon

position:687816:-1
position: 687816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:687962:-1
position: 687962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:683307-683416:-1:exon

position:683307:-1
position: 683307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:683416:-1
position: 683416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:679655-679748:-1:exon

position:679655:-1
position: 679655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:679748:-1
position: 679748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:676246-676413:-1:exon

position:676246:-1
position: 676246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:676413:-1
position: 676413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:672575-672651:-1:exon

position:672575:-1
position: 672575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:672651:-1
position: 672651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:666931-667099:-1:exon

position:666931:-1
position: 666931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:667099:-1
position: 667099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:664670-664725:-1:exon

position:664670:-1
position: 664670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:664725:-1
position: 664725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:661665-661875:-1:exon

position:661875:-1
position: 661875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PSMC4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: PSMC4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 26S proteasome regulatory subunit 6B isoform X1
translation: MEELGLLGEKAQDEAPPPATPRPLPSLGPEPEDLEDLYSRYKKLQQELEFLEVQEEYIKDEQRNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVVYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITGKMNLSEEVDLEDYVARPDKISGADINSICQEGGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEFYK
SIO_010081: PSMC4
subclass of: SO_0000673
so part of: PSMC4
location: complement(join(661762..661875,664670..664725,666931..667099,672575..672651,676246..676413,679655..679748,683307..683416,687816..687962,692554..692740,694370..694459,697200..697235))
location: region:661762-697235:-1
so has part: feature:697200-697235:-1:exon
so has part: feature:694370-694459:-1:exon
so has part: feature:692554-692740:-1:exon
so has part: feature:687816-687962:-1:exon
so has part: feature:683307-683416:-1:exon
so has part: feature:679655-679748:-1:exon
so has part: feature:676246-676413:-1:exon
so has part: feature:672575-672651:-1:exon
so has part: feature:666931-667099:-1:exon
so has part: feature:664670-664725:-1:exon
so has part: feature:661762-661875:-1:exon

XP_041568355.1
type: Protein
SIO_000068: ncbiprotein

position:661762:-1
position: 661762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:697235:-1
position: 697235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:697200-697235:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:694370-694459:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:692554-692740:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:687816-687962:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:683307-683416:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:679655-679748:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:676246-676413:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:672575-672651:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:666931-667099:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:664670-664725:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:661762-661875:-1:exon

PSMC4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: PSMC4
product: proteasome 26S subunit, ATPase 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_041712422.1
SIO_010081: PSMC4
subclass of: SO_0000673
so part of: PSMC4
location: complement(join(662449..662524,664670..664725,666931..667099,672575..672651,676246..676413,679655..679748,683307..683416,687816..687962,692554..692740,694370..694459,697200..697260))
location: region:662449-697260:-1
so has part: feature:697200-697260:-1:exon
so has part: feature:694370-694459:-1:exon
so has part: feature:692554-692740:-1:exon
so has part: feature:687816-687962:-1:exon
so has part: feature:683307-683416:-1:exon
so has part: feature:679655-679748:-1:exon
so has part: feature:676246-676413:-1:exon
so has part: feature:672575-672651:-1:exon
so has part: feature:666931-667099:-1:exon
so has part: feature:664670-664725:-1:exon
so has part: feature:662449-662524:-1:exon

position:662449:-1
position: 662449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:697200-697260:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:694370-694459:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:692554-692740:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:687816-687962:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:683307-683416:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:679655-679748:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:676246-676413:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:672575-672651:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:666931-667099:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:664670-664725:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:662449-662524:-1:exon

position:662524:-1
position: 662524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PSMC4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: PSMC4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 26S proteasome regulatory subunit 6B isoform X2
translation: MEELGLLGEKAQDEAPPPATPRPLPSLGPEPEDLEDLYSRYKKLQQELEFLEVQEEYIKDEQRNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVVYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITGKMNLSEEVDLEDYVARPDKISGADINSICQEGGMLAVRENRYR
SIO_010081: PSMC4
subclass of: SO_0000673
so part of: PSMC4
location: complement(join(662486..662524,664670..664725,666931..667099,672575..672651,676246..676413,679655..679748,683307..683416,687816..687962,692554..692740,694370..694459,697200..697235))
location: region:662486-697235:-1
so has part: feature:697200-697235:-1:exon
so has part: feature:694370-694459:-1:exon
so has part: feature:692554-692740:-1:exon
so has part: feature:687816-687962:-1:exon
so has part: feature:683307-683416:-1:exon
so has part: feature:679655-679748:-1:exon
so has part: feature:676246-676413:-1:exon
so has part: feature:672575-672651:-1:exon
so has part: feature:666931-667099:-1:exon
so has part: feature:664670-664725:-1:exon
so has part: feature:662486-662524:-1:exon

XP_041568356.1
type: Protein
SIO_000068: ncbiprotein

position:662486:-1
position: 662486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:697200-697235:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:694370-694459:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:692554-692740:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:687816-687962:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:683307-683416:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:679655-679748:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:676246-676413:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:672575-672651:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:666931-667099:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:664670-664725:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:662486-662524:-1:exon

LOC121468599
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121468599
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 674298..676118
location: region:674298-676118:1
so has part: feature:674298-676118:1:exon
subclass of: SO_0000011

121468599
type: Gene
SIO_000068: ncbigene

position:674298:1
position: 674298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:676118:1
position: 676118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:674298-676118:1:exon

LOC121468599
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC121468599
product: uncharacterized LOC121468599, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005978496.1
SIO_010081: LOC121468599
subclass of: SO_0000673
so part of: LOC121468599
location: join(674298..674359,674659..674752,675560..675745,676088..676118)
location: region:674298-676118:1
so has part: feature:674298-674359:1:exon
so has part: feature:674659-674752:1:exon
so has part: feature:675560-675745:1:exon
so has part: feature:676088-676118:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:674298-674359:1:exon

position:674359:1
position: 674359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:674659-674752:1:exon

position:674659:1
position: 674659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:674752:1
position: 674752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:675560-675745:1:exon

position:675560:1
position: 675560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:675745:1
position: 675745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:676088-676118:1:exon

position:676088:1
position: 676088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121468599
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC121468599
product: uncharacterized LOC121468599, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_005978495.1
SIO_010081: LOC121468599
subclass of: SO_0000673
so part of: LOC121468599
location: join(674929..675029,675560..675745,676088..676118)
location: region:674929-676118:1
so has part: feature:674929-675029:1:exon
so has part: feature:675560-675745:1:exon
so has part: feature:676088-676118:1:exon

position:674929:1
position: 674929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:674929-675029:1:exon

position:675029:1
position: 675029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:675560-675745:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:676088-676118:1:exon

RBM42
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: RBM42
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(703816..727977)
location: region:703816-727977:-1
so has part: feature:703816-727977:-1:exon
subclass of: SO_0000010

121468589
type: Gene
SIO_000068: ncbigene

position:703816:-1
position: 703816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:727977:-1
position: 727977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:703816-727977:-1:exon

RBM42
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: RBM42
product: RNA binding motif protein 42
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041712401.1
SIO_010081: RBM42
subclass of: SO_0000673
so part of: RBM42
location: complement(join(703816..703997,709890..710084,710979..711099,713750..713935,717637..717818,719936..720112,721358..721420,723056..723140,725509..725611,727793..727977))
location: region:703816-727977:-1
so has part: feature:727793-727977:-1:exon
so has part: feature:725509-725611:-1:exon
so has part: feature:723056-723140:-1:exon
so has part: feature:721358-721420:-1:exon
so has part: feature:719936-720112:-1:exon
so has part: feature:717637-717818:-1:exon
so has part: feature:713750-713935:-1:exon
so has part: feature:710979-711099:-1:exon
so has part: feature:709890-710084:-1:exon
so has part: feature:703816-703997:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:727793-727977:-1:exon

position:727793:-1
position: 727793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:725509-725611:-1:exon

position:725509:-1
position: 725509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:725611:-1
position: 725611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:723056-723140:-1:exon

position:723056:-1
position: 723056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:723140:-1
position: 723140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:721358-721420:-1:exon

position:721358:-1
position: 721358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:721420:-1
position: 721420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:719936-720112:-1:exon

position:719936:-1
position: 719936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:720112:-1
position: 720112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:717637-717818:-1:exon

position:717637:-1
position: 717637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:717818:-1
position: 717818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:713750-713935:-1:exon

position:713750:-1
position: 713750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:713935:-1
position: 713935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:710979-711099:-1:exon

position:710979:-1
position: 710979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:711099:-1
position: 711099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:709890-710084:-1:exon

position:709890:-1
position: 709890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:710084:-1
position: 710084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:703816-703997:-1:exon

position:703997:-1
position: 703997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RBM42
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: RBM42
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding protein 42
translation: MAASAAPGAAGPGMAAGGGPGAAVVVAAGPGAAAGGGGAAVKSGEERLKEMEAEMALFEQEVLGAPGPAPGDPLAPPPVLRPIIATNTYQQVQQSLEARAAAAATVPPLGTPPVPFVGPVSPQRPPILRPAFVPHVLQRPAGPRGPLGLRPPPRGHGGGGAAPGGPPRPPPAARPSPPAETPPHPPGGAAGGRPESGRSGGGGRGARAPPAPRGRRTPSGPPGTPPGTPKTDPARHPGSTHRVPHPPPARPGETPTPKCHEETPPPRAPPPEEPRIGPSLPAPPPAMATPPPEPRPGPAHVTPVPRPLRRPRPQDTPFPVPEVGAEPAAEDKRKGRGERLKRCIRTAAGSSWEDPSLLEWDADDFRIFCGDLGNEVNDETLGRAFGRFPSFLKAKVIRDKRSGKTKGYGFVSFKDPNDYVRAMREMNGKYVGSRPIKLRKSQWKDRNLEVVRRKQREKKKLGLR
SIO_010081: RBM42
subclass of: SO_0000673
so part of: RBM42
location: complement(join(703885..703997,709890..710084,710979..711099,713750..713935,717637..717818,719936..720112,721358..721420,723056..723140,725509..725611,727793..727962))
location: region:703885-727962:-1
so has part: feature:727793-727962:-1:exon
so has part: feature:725509-725611:-1:exon
so has part: feature:723056-723140:-1:exon
so has part: feature:721358-721420:-1:exon
so has part: feature:719936-720112:-1:exon
so has part: feature:717637-717818:-1:exon
so has part: feature:713750-713935:-1:exon
so has part: feature:710979-711099:-1:exon
so has part: feature:709890-710084:-1:exon
so has part: feature:703885-703997:-1:exon

XP_041568335.1
type: Protein
SIO_000068: ncbiprotein

position:703885:-1
position: 703885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:727962:-1
position: 727962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:727793-727962:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:725509-725611:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:723056-723140:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:721358-721420:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:719936-720112:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:717637-717818:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:713750-713935:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:710979-711099:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:709890-710084:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:703885-703997:-1:exon

LOC121468612
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121468612
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(728105..732040)
location: region:728105-732040:-1
so has part: feature:728105-732040:-1:exon
subclass of: SO_0000010

121468612
type: Gene
SIO_000068: ncbigene

position:728105:-1
position: 728105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:732040:-1
position: 732040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:728105-732040:-1:exon

LOC121468612
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC121468612
product: transmembrane immune signaling adaptor TYROBP
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
transcript id: XM_041712438.1
SIO_010081: LOC121468612
subclass of: SO_0000673
so part of: LOC121468612
location: complement(join(728105..728245,730895..731011,731097..731117,731949..732040))
location: region:728105-732040:-1
so has part: feature:731949-732040:-1:exon
so has part: feature:731097-731117:-1:exon
so has part: feature:730895-731011:-1:exon
so has part: feature:728105-728245:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:731949-732040:-1:exon

position:731949:-1
position: 731949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:731097-731117:-1:exon

position:731097:-1
position: 731097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:731117:-1
position: 731117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:730895-731011:-1:exon

position:730895:-1
position: 730895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:731011:-1
position: 731011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:728105-728245:-1:exon

position:728245:-1
position: 728245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121468612
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC121468612
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TYRO protein tyrosine kinase-binding protein
translation: MAPPGTFGLVLLLMGAAAAQSECSGCLPGPGPIAALVAADVIVTLLIAGGAYWLAGRGQRAPPTPRPPEQDSHYQELQGARGDLYSELKR
SIO_010081: LOC121468612
subclass of: SO_0000673
so part of: LOC121468612
location: complement(join(728154..728245,730895..731011,731097..731117,731949..731991))
location: region:728154-731991:-1
so has part: feature:731949-731991:-1:exon
so has part: feature:731097-731117:-1:exon
so has part: feature:730895-731011:-1:exon
so has part: feature:728154-728245:-1:exon

XP_041568372.1
type: Protein
SIO_000068: ncbiprotein

position:728154:-1
position: 728154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:731991:-1
position: 731991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:731949-731991:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:731097-731117:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:730895-731011:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:728154-728245:-1:exon

LOC121468590
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121468590
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <735318..>747240
location: region:735318-747240:1
so has part: feature:735318-747240:1:exon
subclass of: SO_0000010

121468590
type: Gene
SIO_000068: ncbigene

position:735318:1
position: 735318
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:747240:1
position: 747240
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:735318-747240:1:exon

LOC121468590
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC121468590
product: mucin-2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 56% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_041712402.1
SIO_010081: LOC121468590
subclass of: SO_0000673
so part of: LOC121468590
location: join(<735318..735729,743057..743180,743226..743475,743620..>747240)
location: region:735318-747240:1
so has part: feature:735318-735729:1:exon
so has part: feature:743057-743180:1:exon
so has part: feature:743226-743475:1:exon
so has part: feature:743620-747240:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:735318-735729:1:exon

position:735729:1
position: 735729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:743057-743180:1:exon

position:743057:1
position: 743057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:743180:1
position: 743180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:743226-743475:1:exon

position:743226:1
position: 743226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:743475:1
position: 743475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:743620-747240:1:exon

position:743620:1
position: 743620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121468590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC121468590
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mucin-2-like
translation: PLISPQNPVLPPQTPLPIPLPGHAVAVAASGGKDSAVLAHILARLNRRHRLGLRLALLAVDEGISGYRDEALRVLRAAGAALPLPLAVIRHRELFGWDLDQLGPALGRRSRCTVCGVFRRAAMERAAREMGADWIATGHNADDVAETVLMNFLRGDVARLRRAANEAWGATNGPWWATNEVTMATNAGGVTNEVTEATNEVTMATNEVTMATNEVTEATNEVTMATNEVTMATNEVTEATNEVTMATNEVTEATNEVTVVNEVTMATNEVTVATNEVTVVTNRMVATNGMVATNDVLEANNGAMATNEVMVATDEVTMATDEVLEATNGDGVTNEVSAATNEVTNRMVATDEVTVATNEVTEATNEATMVTNEVTVDTNRMVATNEVTVATNEVTVDTNRMVATNEVMVATNGAVATNEVIVDTNANGVTNEVTVATNRMVATNNVLEATNGAVATNEVTVATDGAMATNKVMVATNEVMVATNEVTEATNEVTEATNEVIVDTNEVAVAINEVTVDTNEVTVATNGVTNEVTVATNEVTMATNANEVTTATSEVTVATNDITMATNRMVATNEVTEATNRMVATNNVLEATNEVAVATNEVTMDTNRMVATNNVLEATNGAVATNEVTVATNKVTVATNEILGTTNEVMVVTNEVTVATKEVTMATNEVTVATNEVTVASNVNGATNEVTMDINGMVATDQVSVATNDITMTTNEVTVATNEVTVATNEVTMANNEVAVATDEVTMATNEVTMDTNGMVATNEVMVVTNEVNEATDGMVATNEVTEVTNEVTMATNRMVATNEVAMATNANGVTNEVIVDTNRMVATNGMVATNEVTEATNEVTVATNEVSVVTDEVTVVTNNVLEATNGAVATNEVTVATDGAVATNEVTVATNEVTVATNEVTVATDEVTMAADGTVATNEVTVATKNPTEPNENPTKLNKNPTKPNENPTEPNEESTEPNKNSTKPNENSTKPNENPTKPNENPTKPTKNPTEPNENSTELNENPTKPNQNSTKPKENPTEPNENSTEPNENPTKPNGNSTKPNKNSNKPNENPTKPDGNSTKPNENPMEPNENSMEPNENSTKPNENPMEPNKNSTKPNENPTQPNENPTKPTKNPTKPIKNSTEPNENSTKPNENPTKPNQNPTKLNENPTKPNEIPTKLNENSTKPNENPTKPTKTPTKPTKNPMKPTKNPTEPNENSTKLNKNPKKPNENPTKPNEIPTKPNENSTQPNENPTEPTKNPTKPTKNPTKPNENPMRAWENLMEPNKNPTKPTKTPTKPTKTSPKPTKTPTKPTKNPTKPTKTSPKPTKTPPLPKAPSGKPNPASPWPTVPRLKPLRHAAQKEIVLYAHFLGLPYASAECRHAPLAFRGHPRALLKDLEAARPAAVAALAHSGRRLALGAAPGAGAAPGACRSCGGAASGEMCMACVLVAALERGRPRVALGKRGMRVGNEGGWWDGGGGHQD
SIO_010081: LOC121468590
subclass of: SO_0000673
so part of: LOC121468590
location: join(<735318..735729,743057..743180,743226..743475,743620..>747240)
location: region:735318-747240:1
so has part: feature:735318-735729:1:exon
so has part: feature:743057-743180:1:exon
so has part: feature:743226-743475:1:exon
so has part: feature:743620-747240:1:exon

XP_041568336.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:735318-735729:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:743057-743180:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:743226-743475:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:743620-747240:1:exon

LOC121468613
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121468613
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 752076..767341
location: region:752076-767341:1
so has part: feature:752076-767341:1:exon
subclass of: SO_0000010

121468613
type: Gene
SIO_000068: ncbigene

position:752076:1
position: 752076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:767341:1
position: 767341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:752076-767341:1:exon

LOC121468613
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC121468613
product: synaptophysin-like protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 66 samples with support for all annotated introns
transcript id: XM_041712440.1
SIO_010081: LOC121468613
subclass of: SO_0000673
so part of: LOC121468613
location: join(752076..752182,753728..753846,756067..756221,760344..760399,764621..764797,767181..767341)
location: region:752076-767341:1
so has part: feature:752076-752182:1:exon
so has part: feature:753728-753846:1:exon
so has part: feature:756067-756221:1:exon
so has part: feature:760344-760399:1:exon
so has part: feature:764621-764797:1:exon
so has part: feature:767181-767341:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:752076-752182:1:exon

position:752182:1
position: 752182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:753728-753846:1:exon

position:753728:1
position: 753728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:753846:1
position: 753846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:756067-756221:1:exon

position:756067:1
position: 756067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:756221:1
position: 756221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:760344-760399:1:exon

position:760344:1
position: 760344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:760399:1
position: 760399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:764621-764797:1:exon

position:764621:1
position: 764621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:764797:1
position: 764797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:767181-767341:1:exon

position:767181:1
position: 767181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121468613
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC121468613
product: synaptophysin-like protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_041712439.1
SIO_010081: LOC121468613
subclass of: SO_0000673
so part of: LOC121468613
location: join(752076..752182,753728..753846,756067..756277,764621..764797,767181..767340)
location: region:752076-767340:1
so has part: feature:752076-752182:1:exon
so has part: feature:753728-753846:1:exon
so has part: feature:756067-756277:1:exon
so has part: feature:764621-764797:1:exon
so has part: feature:767181-767340:1:exon

position:767340:1
position: 767340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:752076-752182:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:753728-753846:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:756067-756277:1:exon

position:756277:1
position: 756277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:764621-764797:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:767181-767340:1:exon

LOC121468613
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC121468613
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synaptophysin-like protein 1 isoform X1
translation: MAAPRVSLGALKEPLGLSRGLQWFFSIFAFATCGGFEGSVSFSLTCPGLENETVTAKFGYPFRLNQATFHPSLTHLCNHTWPRDVHLVGDFSGAARCFVGVAVTSFLYSLGALGGYLCYLHLYRCAGSRLPLMDLLASGLVAALWLVASSAWAQGLGHVRAAAAAPLPHCPSPTVRCHPAGVTPMGSLGASVAFGFLNLLLWAGGCWFVYKETPLHRPAPPPAPGPAPM
SIO_010081: LOC121468613
subclass of: SO_0000673
so part of: LOC121468613
location: join(752114..752182,753728..753846,756067..756277,764621..764797,767181..767294)
location: region:752114-767294:1
so has part: feature:752114-752182:1:exon
so has part: feature:753728-753846:1:exon
so has part: feature:756067-756277:1:exon
so has part: feature:764621-764797:1:exon
so has part: feature:767181-767294:1:exon

XP_041568373.1
type: Protein
SIO_000068: ncbiprotein

position:752114:1
position: 752114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:767294:1
position: 767294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:752114-752182:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:753728-753846:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:756067-756277:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:764621-764797:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:767181-767294:1:exon

LOC121468613
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC121468613
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synaptophysin-like protein 1 isoform X2
translation: MAAPRVSLGALKEPLGLSRGLQWFFSIFAFATCGGFEGSVSFSLTCPGLENETVTAKFGYPFRLNQATFHPSLTHLCNHTWPRDVHLVGDFSGAARCFVGVAVTSFLYSLGALGGYLCYLHLYRCAGSRLPLMDLLASGLVAALWLVASSAWAQGLGHVRAAAAAPLPHCPSPTVRCHPAGVTPMGSLGASVAFGFLNLLLWAGGCWFVYKETPLHRPAPPPAPGPAPM
SIO_010081: LOC121468613
subclass of: SO_0000673
so part of: LOC121468613
location: join(752114..752182,753728..753846,756067..756221,760344..760399,764621..764797,767181..767294)
location: region:752114-767294:1
so has part: feature:752114-752182:1:exon
so has part: feature:753728-753846:1:exon
so has part: feature:756067-756221:1:exon
so has part: feature:760344-760399:1:exon
so has part: feature:764621-764797:1:exon
so has part: feature:767181-767294:1:exon

XP_041568374.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:752114-752182:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:753728-753846:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:756067-756221:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:760344-760399:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:764621-764797:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:767181-767294:1:exon

LOC121468617
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121468617
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 767408..769032
location: region:767408-769032:1
so has part: feature:767408-769032:1:exon
subclass of: SO_0000011

121468617
type: Gene
SIO_000068: ncbigene

position:767408:1
position: 767408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:769032:1
position: 769032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:767408-769032:1:exon

LOC121468617
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC121468617
product: uncharacterized LOC121468617
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_005978504.1
SIO_010081: LOC121468617
subclass of: SO_0000673
so part of: LOC121468617
location: join(767408..767676,768953..769032)
location: region:767408-769032:1
so has part: feature:767408-767676:1:exon
so has part: feature:768953-769032:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:767408-767676:1:exon

position:767676:1
position: 767676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:768953-769032:1:exon

position:768953:1
position: 768953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121468618
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121468618
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(769992..770438)
location: region:769992-770438:-1
so has part: feature:769992-770438:-1:exon
subclass of: SO_0000011

121468618
type: Gene
SIO_000068: ncbigene

position:769992:-1
position: 769992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:770438:-1
position: 770438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:769992-770438:-1:exon

LOC121468618
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC121468618
product: uncharacterized LOC121468618
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XR_005978505.1
SIO_010081: LOC121468618
subclass of: SO_0000673
so part of: LOC121468618
location: complement(join(769992..770118,770181..770438))
location: region:769992-770438:-1
so has part: feature:770181-770438:-1:exon
so has part: feature:769992-770118:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:770181-770438:-1:exon

position:770181:-1
position: 770181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:769992-770118:-1:exon

position:770118:-1
position: 770118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121468591
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121468591
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(776226..791902)
location: region:776226-791902:-1
so has part: feature:776226-791902:-1:exon
subclass of: SO_0000010

121468591
type: Gene
SIO_000068: ncbigene

position:776226:-1
position: 776226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:791902:-1
position: 791902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:776226-791902:-1:exon

LOC121468591
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC121468591
product: kallikrein-14-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 33% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041712403.1
SIO_010081: LOC121468591
subclass of: SO_0000673
so part of: LOC121468591
location: complement(join(776226..776389,778795..779057,780554..780807,788937..789132,791815..791902))
location: region:776226-791902:-1
so has part: feature:791815-791902:-1:exon
so has part: feature:788937-789132:-1:exon
so has part: feature:780554-780807:-1:exon
so has part: feature:778795-779057:-1:exon
so has part: feature:776226-776389:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:791815-791902:-1:exon

position:791815:-1
position: 791815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:788937-789132:-1:exon

position:788937:-1
position: 788937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:789132:-1
position: 789132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:780554-780807:-1:exon

position:780554:-1
position: 780554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:780807:-1
position: 780807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:778795-779057:-1:exon

position:778795:-1
position: 778795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:779057:-1
position: 779057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:776226-776389:-1:exon

position:776389:-1
position: 776389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121468591
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC121468591
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kallikrein-14-like
translation: MCHHLCHLPCHLPCHLRAVETLLLLLLISGATSLQDPECPSGCVPEEREQIRVIGGSPCLPQSQPWQALLYGPLRCGGVLLRPQWVLTAAHCVRRGLRVRLGEDDLTRREGSEQDRRVTQAVTHPSFDPGTLDNDVALLRLDRPVTFGRGVRALALPRSCAPAGTTCLLSGWGTVTTPQGIFGGNIGGIGEKLGETLEQNFGVNLGEFRGASGRILGRLPAVNLPSRLICAYVQLLPDETCRRAYPQRITPSMVCAGVRNRRVDSCQGDSGGPLSCNGTLQGVVSWGLQTCALPGHPGVYTRICRFLTWIRDTMDRR
SIO_010081: LOC121468591
subclass of: SO_0000673
so part of: LOC121468591
location: complement(join(776237..776389,778795..779057,780554..780807,788937..789132,791815..791902))
location: region:776237-791902:-1
so has part: feature:791815-791902:-1:exon
so has part: feature:788937-789132:-1:exon
so has part: feature:780554-780807:-1:exon
so has part: feature:778795-779057:-1:exon
so has part: feature:776237-776389:-1:exon

XP_041568337.1
type: Protein
SIO_000068: ncbiprotein

position:776237:-1
position: 776237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:791815-791902:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:788937-789132:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:780554-780807:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:778795-779057:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:776237-776389:-1:exon

LOC121468619
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121468619
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(802762..808069)
location: region:802762-808069:-1
so has part: feature:802762-808069:-1:exon
subclass of: SO_0000010

121468619
type: Gene
SIO_000068: ncbigene

position:802762:-1
position: 802762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:808069:-1
position: 808069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:802762-808069:-1:exon

LOC121468619
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC121468619
product: wiskott-Aldrich syndrome protein family member 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_041712443.1
SIO_010081: LOC121468619
subclass of: SO_0000673
so part of: LOC121468619
location: complement(join(802762..803259,806087..806246,807534..808069))
location: region:802762-808069:-1
so has part: feature:807534-808069:-1:exon
so has part: feature:806087-806246:-1:exon
so has part: feature:802762-803259:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:807534-808069:-1:exon

position:807534:-1
position: 807534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:806087-806246:-1:exon

position:806087:-1
position: 806087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:806246:-1
position: 806246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:802762-803259:-1:exon

position:803259:-1
position: 803259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121468619
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC121468619
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: wiskott-Aldrich syndrome protein family member 2-like
translation: MTSPHPKNAAPPPPPKIPERPRPNLGRNSRDQQFRGHGAPLPLLPPSGSRSGSRSGSRSGSRSGSRSGSLQVSAPPPALLPSPSPAAVPASDVTDDVIAARLRHLAAARHRQPRGAAGGAAGGRLLTENREFPPKNREFLAKIRICIKNREFVTKNWEFVPKNRDFRAQKLGF
SIO_010081: LOC121468619
subclass of: SO_0000673
so part of: LOC121468619
location: complement(join(802994..803259,806087..806246,807534..807629))
location: region:802994-807629:-1
so has part: feature:807534-807629:-1:exon
so has part: feature:806087-806246:-1:exon
so has part: feature:802994-803259:-1:exon

XP_041568377.1
type: Protein
SIO_000068: ncbiprotein

position:802994:-1
position: 802994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:807629:-1
position: 807629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:807534-807629:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:806087-806246:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:802994-803259:-1:exon

SCN1B
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: SCN1B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(812218..838511)
location: region:812218-838511:-1
so has part: feature:812218-838511:-1:exon
subclass of: SO_0000010

121468595
type: Gene
SIO_000068: ncbigene

position:812218:-1
position: 812218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:838511:-1
position: 838511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:812218-838511:-1:exon

SCN1B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: SCN1B
product: sodium voltage-gated channel beta subunit 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_041712409.1
SIO_010081: SCN1B
subclass of: SO_0000673
so part of: SCN1B
location: complement(join(812218..812360,814392..814527,828977..829217,832866..833032,837923..838511))
location: region:812218-838511:-1
so has part: feature:837923-838511:-1:exon
so has part: feature:832866-833032:-1:exon
so has part: feature:828977-829217:-1:exon
so has part: feature:814392-814527:-1:exon
so has part: feature:812218-812360:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:837923-838511:-1:exon

position:837923:-1
position: 837923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:832866-833032:-1:exon

position:832866:-1
position: 832866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:833032:-1
position: 833032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:828977-829217:-1:exon

position:828977:-1
position: 828977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:829217:-1
position: 829217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:814392-814527:-1:exon

position:814392:-1
position: 814392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:814527:-1
position: 814527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:812218-812360:-1:exon

position:812360:-1
position: 812360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SCN1B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: SCN1B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium channel subunit beta-1
translation: MLLPLLLGFLQVWGALGGCVEVASGTEAVLGLPFRLLCIACKRRSETPAEAESEWFFRPEGAPQFEKILHYSPEEGEWVAPGPFFGVMSWNGSRGTRDLQDLSVWLAAVQHNHAGHYVCRLKRNLTFEGYTYSLARNQTLRLAVVEKARRDLASIVSEILMYVLIVVLTLWLAAEMLYCYRKVAAAAPPPDSASEYLAITSESKENGGQVAE
SIO_010081: SCN1B
subclass of: SO_0000673
so part of: SCN1B
location: complement(join(812300..812360,814392..814527,828977..829217,832866..833032,837923..837956))
location: region:812300-837956:-1
so has part: feature:837923-837956:-1:exon
so has part: feature:832866-833032:-1:exon
so has part: feature:828977-829217:-1:exon
so has part: feature:814392-814527:-1:exon
so has part: feature:812300-812360:-1:exon

XP_041568343.1
type: Protein
SIO_000068: ncbiprotein

position:812300:-1
position: 812300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:837956:-1
position: 837956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:837923-837956:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:832866-833032:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:828977-829217:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:814392-814527:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:812300-812360:-1:exon

BCL3
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: BCL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 842872..870874
location: region:842872-870874:1
so has part: feature:842872-870874:1:exon
subclass of: SO_0000010

121468610
type: Gene
SIO_000068: ncbigene

position:842872:1
position: 842872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:870874:1
position: 870874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:842872-870874:1:exon

BCL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: BCL3
product: BCL3 transcription coactivator
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_041712436.1
SIO_010081: BCL3
subclass of: SO_0000673
so part of: BCL3
location: join(842872..843206,845499..845658,849157..849265,856942..857194,858934..859022,861700..861777,865147..865314,868451..868526,870622..870874)
location: region:842872-870874:1
so has part: feature:842872-843206:1:exon
so has part: feature:845499-845658:1:exon
so has part: feature:849157-849265:1:exon
so has part: feature:856942-857194:1:exon
so has part: feature:858934-859022:1:exon
so has part: feature:861700-861777:1:exon
so has part: feature:865147-865314:1:exon
so has part: feature:868451-868526:1:exon
so has part: feature:870622-870874:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:842872-843206:1:exon

position:843206:1
position: 843206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:845499-845658:1:exon

position:845499:1
position: 845499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:845658:1
position: 845658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:849157-849265:1:exon

position:849157:1
position: 849157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:849265:1
position: 849265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:856942-857194:1:exon

position:856942:1
position: 856942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:857194:1
position: 857194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:858934-859022:1:exon

position:858934:1
position: 858934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:859022:1
position: 859022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:861700-861777:1:exon

position:861700:1
position: 861700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:861777:1
position: 861777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:865147-865314:1:exon

position:865147:1
position: 865147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:865314:1
position: 865314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:868451-868526:1:exon

position:868451:1
position: 868451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:868526:1
position: 868526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:870622-870874:1:exon

position:870622:1
position: 870622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

BCL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: BCL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: B-cell lymphoma 3 protein
translation: MAEDLPVDLRTRRPQNPPKPPQKRRPSPPPPETSLPLRKRRSVLGGGNPQILGETPTNPQIRAGKSPKFGIGTGVRAEPPLPFLGGGGILGVPPAPILGSPNLGVPPEPPLAAAIAAATRQDEDGDTPLHIAVAQGAVTVARRLVSLFLRGGRDLDVYNHLRQTPLHLAVITGQVSLVRLLLSHGASAMAPDRLGRTCAHLACGSHLWGGGASAPGGGACAGPRPRVLRELLRGPAPPPDLQARDYEGLTPLHVAVAAGSRESVLLLLEHGADVDAGDIKSGRSPLLHAVESDSLEMAELLLQHGASVNAQSYAGCTALHAAAGRGLLRLLRLLLRCGADCGLRNLHNDTAAGVAASAQVIDILRGKASRPPQDPPKSPRDPPHGTASQAPPTSASAANGVEGAGLTGSSAHRRSSDQSEAAAGRPRPSAAPRLRPREGRGQGGIN
SIO_010081: BCL3
subclass of: SO_0000673
so part of: BCL3
location: join(842987..843206,845499..845658,849157..849265,856942..857194,858934..859022,861700..861777,865147..865314,868451..868526,870622..870809)
location: region:842987-870809:1
so has part: feature:842987-843206:1:exon
so has part: feature:845499-845658:1:exon
so has part: feature:849157-849265:1:exon
so has part: feature:856942-857194:1:exon
so has part: feature:858934-859022:1:exon
so has part: feature:861700-861777:1:exon
so has part: feature:865147-865314:1:exon
so has part: feature:868451-868526:1:exon
so has part: feature:870622-870809:1:exon

XP_041568370.1
type: Protein
SIO_000068: ncbiprotein

position:842987:1
position: 842987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:870809:1
position: 870809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:842987-843206:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:845499-845658:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:849157-849265:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:856942-857194:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:858934-859022:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:861700-861777:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:865147-865314:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:868451-868526:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:870622-870809:1:exon

NPHS1
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: NPHS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(870897..926082)
location: region:870897-926082:-1
so has part: feature:870897-926082:-1:exon
subclass of: SO_0000010

121468592
type: Gene
SIO_000068: ncbigene

position:870897:-1
position: 870897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:926082:-1
position: 926082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:870897-926082:-1:exon

NPHS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: NPHS1
product: NPHS1 adhesion molecule, nephrin
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 86% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041712404.1
SIO_010081: NPHS1
subclass of: SO_0000673
so part of: NPHS1
location: complement(join(870897..871001,871229..871281,871370..871421,871912..872123,874083..874246,877301..877412,878285..878592,880267..880432,882028..882202,887289..887410,889759..889899,893173..893311,895434..895575,898801..898933,900541..900697,908152..908343,909586..909735,910789..910946,913059..913227,916584..916702,918666..918766,921436..921517,924132..924260,926001..926082))
location: region:870897-926082:-1
so has part: feature:926001-926082:-1:exon
so has part: feature:924132-924260:-1:exon
so has part: feature:921436-921517:-1:exon
so has part: feature:918666-918766:-1:exon
so has part: feature:916584-916702:-1:exon
so has part: feature:913059-913227:-1:exon
so has part: feature:910789-910946:-1:exon
so has part: feature:909586-909735:-1:exon
so has part: feature:908152-908343:-1:exon
so has part: feature:900541-900697:-1:exon
so has part: feature:898801-898933:-1:exon
so has part: feature:895434-895575:-1:exon
so has part: feature:893173-893311:-1:exon
so has part: feature:889759-889899:-1:exon
so has part: feature:887289-887410:-1:exon
so has part: feature:882028-882202:-1:exon
so has part: feature:880267-880432:-1:exon
so has part: feature:878285-878592:-1:exon
so has part: feature:877301-877412:-1:exon
so has part: feature:874083-874246:-1:exon
so has part: feature:871912-872123:-1:exon
so has part: feature:871370-871421:-1:exon
so has part: feature:871229-871281:-1:exon
so has part: feature:870897-871001:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:926001-926082:-1:exon

position:926001:-1
position: 926001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:924132-924260:-1:exon

position:924132:-1
position: 924132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:924260:-1
position: 924260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:921436-921517:-1:exon

position:921436:-1
position: 921436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:921517:-1
position: 921517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:918666-918766:-1:exon

position:918666:-1
position: 918666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:918766:-1
position: 918766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:916584-916702:-1:exon

position:916584:-1
position: 916584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:916702:-1
position: 916702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:913059-913227:-1:exon

position:913059:-1
position: 913059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:913227:-1
position: 913227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:910789-910946:-1:exon

position:910789:-1
position: 910789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:910946:-1
position: 910946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:909586-909735:-1:exon

position:909586:-1
position: 909586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:909735:-1
position: 909735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:908152-908343:-1:exon

position:908152:-1
position: 908152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:908343:-1
position: 908343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:900541-900697:-1:exon

position:900541:-1
position: 900541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:900697:-1
position: 900697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:898801-898933:-1:exon

position:898801:-1
position: 898801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:898933:-1
position: 898933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:895434-895575:-1:exon

position:895434:-1
position: 895434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:895575:-1
position: 895575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:893173-893311:-1:exon

position:893173:-1
position: 893173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:893311:-1
position: 893311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:889759-889899:-1:exon

position:889759:-1
position: 889759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:889899:-1
position: 889899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:887289-887410:-1:exon

position:887289:-1
position: 887289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:887410:-1
position: 887410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:882028-882202:-1:exon

position:882028:-1
position: 882028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:882202:-1
position: 882202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:880267-880432:-1:exon

position:880267:-1
position: 880267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:880432:-1
position: 880432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:878285-878592:-1:exon

position:878285:-1
position: 878285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:878592:-1
position: 878592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:877301-877412:-1:exon

position:877301:-1
position: 877301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:877412:-1
position: 877412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:874083-874246:-1:exon

position:874083:-1
position: 874083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:874246:-1
position: 874246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:871912-872123:-1:exon

position:871912:-1
position: 871912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:872123:-1
position: 872123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:871370-871421:-1:exon

position:871370:-1
position: 871370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:871421:-1
position: 871421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:871229-871281:-1:exon

position:871229:-1
position: 871229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:871281:-1
position: 871281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:870897-871001:-1:exon

position:871001:-1
position: 871001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NPHS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: NPHS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nephrin
translation: MGGLVCTGLYWEGNRTHSTRPALLSVIVPPSPPQLELLEGAELPLVGGAEVRVRCHAHDARPAPTLELRLGQEPLPDVASRVFEGSHPKLSSSEATARLTPVPSDHGRLLLCSASNGAAAPVTAGLRLEIAVPPSAPSIQGLPALVRAGEELRLLCLSRGGRPPPSLHWDKDGAPLEGAWSVDEGGVARTRLVFSPAPEDDGAILRCRAVTSLPGGGASASVKLRVTYPPAELTLHGSAALAEGEEGRLSCTSAPSNPPVRLRWWLGGRELRASGQGRAPGGGAVSNVTLRGRGQDHGSALVCEAETPGLGTRSVRAMVSVSREWDWEGLGACPSKGACHLKGACPSLAPPPDPPTALWVEAPPPNATFRVGEGLRLLCLARGGHPAPQLGWSKDGRPLPEAPPQSRSGHVTMRALHVTAAPSDNGADFRCEAGPARSAPVRVRVLFPAQSVSISLAPPQPRPGHALSLTCRAGPAHPAPELTWSRPGHAPEAGLPLPPSPAPHGGVTAGSRLLFQAALSLQDQPITCRAWSASLGVATPPCSAPAPPPSGFRKVPRPFWGCRSAPIPPPESCNWSVRGRGITPGLSPRFRLSPGGALRIANVTRADSAAYRVRCRNAEGAAGAEVTLLVLVPPSIVRAPDPVVVEEGGEGQLLCEAQGSPLPPGSVQWARLGDSGAPLPLPPGLEPLPGGPGGSLWVRGARRDLGGPYECRVDSGVPPPARAVVRLLVTYGPEMEAEPEEGAGPGVVLVPEGAESAQLRCRARGVPGVELSWERNGRSLGAGEPGSPFRELQWREGPWSSSVLSVANLSESRARLRRLFHQSHQSHQSSQSSQSPRPRYRYQNVPAAPPDWENWENWEGGNGTIGVFECVAKNERGRARRRVRLRLGDRPDPPRALRLSGVSGTSLSLTWEPGFDGGLPQHFLLRAAGPGAPPPPAALVTSGWSLTLGGLRPATPYDVTVRARNGRGDSAPARLRAATSAPPSAPPPRQEEPEQPQGGVAEGGGAPPALLGALCALGGLLLPALGAGLCCRCHFRFRWGRGRKPAEGAETPSSGSSRGPSGFGSAPKGAELHLYEEVEPWGEGQEVTPEPLVTPEGELV
SIO_010081: NPHS1
subclass of: SO_0000673
so part of: NPHS1
location: complement(join(870957..871001,871229..871281,871370..871421,871912..872123,874083..874246,877301..877412,878285..878592,880267..880432,882028..882202,887289..887410,889759..889899,893173..893311,895434..895575,898801..898933,900541..900697,908152..908343,909586..909735,910789..910946,913059..913227,916584..916702,918666..918766,921436..921517,924132..924260,926001..926082))
location: region:870957-926082:-1
so has part: feature:926001-926082:-1:exon
so has part: feature:924132-924260:-1:exon
so has part: feature:921436-921517:-1:exon
so has part: feature:918666-918766:-1:exon
so has part: feature:916584-916702:-1:exon
so has part: feature:913059-913227:-1:exon
so has part: feature:910789-910946:-1:exon
so has part: feature:909586-909735:-1:exon
so has part: feature:908152-908343:-1:exon
so has part: feature:900541-900697:-1:exon
so has part: feature:898801-898933:-1:exon
so has part: feature:895434-895575:-1:exon
so has part: feature:893173-893311:-1:exon
so has part: feature:889759-889899:-1:exon
so has part: feature:887289-887410:-1:exon
so has part: feature:882028-882202:-1:exon
so has part: feature:880267-880432:-1:exon
so has part: feature:878285-878592:-1:exon
so has part: feature:877301-877412:-1:exon
so has part: feature:874083-874246:-1:exon
so has part: feature:871912-872123:-1:exon
so has part: feature:871370-871421:-1:exon
so has part: feature:871229-871281:-1:exon
so has part: feature:870957-871001:-1:exon

XP_041568338.1
type: Protein
SIO_000068: ncbiprotein

position:870957:-1
position: 870957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:926001-926082:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:924132-924260:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:921436-921517:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:918666-918766:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:916584-916702:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:913059-913227:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:910789-910946:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:909586-909735:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:908152-908343:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:900541-900697:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:898801-898933:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:895434-895575:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:893173-893311:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:889759-889899:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:887289-887410:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:882028-882202:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:880267-880432:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:878285-878592:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:877301-877412:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:874083-874246:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:871912-872123:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:871370-871421:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:871229-871281:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:870957-871001:-1:exon

LOC121468572
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121468572
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(927138..930653)
location: region:927138-930653:-1
so has part: feature:927138-930653:-1:exon
subclass of: SO_0000011

121468572
type: Gene
SIO_000068: ncbigene

position:927138:-1
position: 927138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:930653:-1
position: 930653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:927138-930653:-1:exon

LOC121468572
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC121468572
product: uncharacterized LOC121468572
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_005978489.1
SIO_010081: LOC121468572
subclass of: SO_0000673
so part of: LOC121468572
location: complement(join(927138..927253,929390..929587,930619..930653))
location: region:927138-930653:-1
so has part: feature:930619-930653:-1:exon
so has part: feature:929390-929587:-1:exon
so has part: feature:927138-927253:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:930619-930653:-1:exon

position:930619:-1
position: 930619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:929390-929587:-1:exon

position:929390:-1
position: 929390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:929587:-1
position: 929587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:927138-927253:-1:exon

position:927253:-1
position: 927253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KMT2B
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: KMT2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 946587..1047834
location: region:946587-1047834:1
so has part: feature:946587-1047834:1:exon
subclass of: SO_0000010

121468593
type: Gene
SIO_000068: ncbigene

position:946587:1
position: 946587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1047834:1
position: 1047834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:946587-1047834:1:exon

KMT2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: KMT2B
product: lysine methyltransferase 2B
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041712405.1
SIO_010081: KMT2B
subclass of: SO_0000673
so part of: KMT2B
location: join(946587..947399,948320..948361,949558..949624,951376..951646,955099..955154,962695..962810,965958..966062,967870..967983,970670..970816,974261..974350,975640..975709,976293..976382,977375..977457,977935..978024,980275..980439,981829..981899,982918..983000,984139..984233,988237..988374,998337..998495,1003768..1003888,1006255..1006333,1008234..1008489,1013589..1013668,1013776..1013886,1015105..1017480,1020255..1020296,1022584..1022639,1024655..1024798,1028352..1028426,1034799..1034983,1036537..1036647,1040712..1040795,1043426..1043555,1047488..1047834)
location: region:946587-1047834:1
so has part: feature:946587-947399:1:exon
so has part: feature:948320-948361:1:exon
so has part: feature:949558-949624:1:exon
so has part: feature:951376-951646:1:exon
so has part: feature:955099-955154:1:exon
so has part: feature:962695-962810:1:exon
so has part: feature:965958-966062:1:exon
so has part: feature:967870-967983:1:exon
so has part: feature:970670-970816:1:exon
so has part: feature:974261-974350:1:exon
so has part: feature:975640-975709:1:exon
so has part: feature:976293-976382:1:exon
so has part: feature:977375-977457:1:exon
so has part: feature:977935-978024:1:exon
so has part: feature:980275-980439:1:exon
so has part: feature:981829-981899:1:exon
so has part: feature:982918-983000:1:exon
so has part: feature:984139-984233:1:exon
so has part: feature:988237-988374:1:exon
so has part: feature:998337-998495:1:exon
so has part: feature:1003768-1003888:1:exon
so has part: feature:1006255-1006333:1:exon
so has part: feature:1008234-1008489:1:exon
so has part: feature:1013589-1013668:1:exon
so has part: feature:1013776-1013886:1:exon
so has part: feature:1015105-1017480:1:exon
so has part: feature:1020255-1020296:1:exon
so has part: feature:1022584-1022639:1:exon
so has part: feature:1024655-1024798:1:exon
so has part: feature:1028352-1028426:1:exon
so has part: feature:1034799-1034983:1:exon
so has part: feature:1036537-1036647:1:exon
so has part: feature:1040712-1040795:1:exon
so has part: feature:1043426-1043555:1:exon
so has part: feature:1047488-1047834:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:946587-947399:1:exon

position:947399:1
position: 947399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:948320-948361:1:exon

position:948320:1
position: 948320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:948361:1
position: 948361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:949558-949624:1:exon

position:949558:1
position: 949558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:949624:1
position: 949624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:951376-951646:1:exon

position:951376:1
position: 951376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:951646:1
position: 951646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:955099-955154:1:exon

position:955099:1
position: 955099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:955154:1
position: 955154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:962695-962810:1:exon

position:962695:1
position: 962695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:962810:1
position: 962810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:965958-966062:1:exon

position:965958:1
position: 965958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:966062:1
position: 966062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:967870-967983:1:exon

position:967870:1
position: 967870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:967983:1
position: 967983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:970670-970816:1:exon

position:970670:1
position: 970670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:970816:1
position: 970816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:974261-974350:1:exon

position:974261:1
position: 974261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:974350:1
position: 974350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:975640-975709:1:exon

position:975640:1
position: 975640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:975709:1
position: 975709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:976293-976382:1:exon

position:976293:1
position: 976293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:976382:1
position: 976382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:977375-977457:1:exon

position:977375:1
position: 977375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:977457:1
position: 977457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:977935-978024:1:exon

position:977935:1
position: 977935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:978024:1
position: 978024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:980275-980439:1:exon

position:980275:1
position: 980275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:980439:1
position: 980439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:981829-981899:1:exon

position:981829:1
position: 981829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:981899:1
position: 981899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:982918-983000:1:exon

position:982918:1
position: 982918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:983000:1
position: 983000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:984139-984233:1:exon

position:984139:1
position: 984139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:984233:1
position: 984233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:988237-988374:1:exon

position:988237:1
position: 988237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:988374:1
position: 988374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:998337-998495:1:exon

position:998337:1
position: 998337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:998495:1
position: 998495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1003768-1003888:1:exon

position:1003768:1
position: 1003768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1003888:1
position: 1003888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1006255-1006333:1:exon

position:1006255:1
position: 1006255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1006333:1
position: 1006333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1008234-1008489:1:exon

position:1008234:1
position: 1008234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1008489:1
position: 1008489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1013589-1013668:1:exon

position:1013589:1
position: 1013589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1013668:1
position: 1013668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1013776-1013886:1:exon

position:1013776:1
position: 1013776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1013886:1
position: 1013886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1015105-1017480:1:exon

position:1015105:1
position: 1015105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1017480:1
position: 1017480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1020255-1020296:1:exon

position:1020255:1
position: 1020255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1020296:1
position: 1020296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:1022584-1022639:1:exon

position:1022584:1
position: 1022584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1022639:1
position: 1022639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:1024655-1024798:1:exon

position:1024655:1
position: 1024655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1024798:1
position: 1024798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:1028352-1028426:1:exon

position:1028352:1
position: 1028352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1028426:1
position: 1028426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:1034799-1034983:1:exon

position:1034799:1
position: 1034799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1034983:1
position: 1034983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:1036537-1036647:1:exon

position:1036537:1
position: 1036537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1036647:1
position: 1036647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:1040712-1040795:1:exon

position:1040712:1
position: 1040712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1040795:1
position: 1040795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:1043426-1043555:1:exon

position:1043426:1
position: 1043426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1043555:1
position: 1043555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:1047488-1047834:1:exon

position:1047488:1
position: 1047488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

KMT2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: KMT2B
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: histone-lysine N-methyltransferase 2B
translation: MGRPPAGSDVAAAGSDVASTGSEVTVVRNGDGAGGDVTGRGDDVTGRGDDVTGRVFDLLSRARQQLGRIDRRQRAGSEEPEEPPGEPQGSPRIKHVCRRAPPPEPGTPPEDSDAEGGARPKRPRPGPAPSPSPAPSPSPSPSLPKPRPSPRGGRGQGRGQGRGSRCGRCRGCRRGQDCGHCPNCRDKPKFGGPNTKKQCCVLRRCDKIEARKLERLGRRGRGPAPRAPPGGDSEEDSGDGGGGAAAAPMGGPEGGGGGDWGPPGASGPPQNGWGRGRNGDGGGAGTRLRVDFREDSALDNVWLMGGLSILSSVPVSAPLVCLLCASKGLHQLVLCQVCCQPFHSFCLGAGEAPGPGQAGAWSCRRCRSCGVCARRGRPSKPLLECRRCRRCFHPTCLGPGAPPRAPPGHWVCWGCQSCGTPEGGEGRDPSPITEAGEGLSPPRDHEEPPEGGEGPEPPPGSPKGVSGPALREVLQALLSSAHGPALLTCAQCPPGGPPTHLGPCDIGAVAHLAEGGAYGSLEEFSRDVAAVLLRKGRGHPDHAPSADHAPDLSHAPNSGHAPDSGHAPNAQELFIKLMGGAFPWFDARDPKIWSPPETPKAPPLPVEPPSSDHTYARWRPEPAPPSPGEEGAEPLVPGGGGADERQCALCLRCGDAPAQEEGRLLYLGQNEWCHVNCALWSAEVFEEGDGTLRNVHAAVARGRQMRCEHCGRPGATVGCCLAACAANFHFTCARRCRAAFLRDKRVFCQRHGRLLAGEDLVRDGAFAVLRRVLVDFGGISLKRKFLGGLEPEAVNVMIGSIRIDHLGALSELSERDGRLFPVGYTCWRLYWSTRDPRRRCWYRCRILEHSPGPEGGGGGAGTPPGPPPNTTGPSPTAAPVTDPSPNSPKIGQIHPKFSPETPPQIYPKFTGHPPPPRHIPNLGDTEVPPRPRRPPPRSMPLPRPSSPKGAVAPPMSPSVSPPGPPQGWGHVTTRSPRGDTSDDDDGDSATTAVTMPPRGRGRYFGYARTVVAPAVALSPLSPCPQICQVDGADDATRGTVPPEVPPMPPEVPPEVSPMPPSAEGLPADIVEFVLRGGTGDGDSGGTWRGRRGGDVGQSHRVGDIREGHHLGDILRSHQVGDIDQSHHVGDIGQSHRVGDIVKSHQVGDIGQGHHLWDIDGGHQVGDIDGGHHFRDIMKSHRLGDIDQGHQVGDIDRGHRLGDIDGGHRLGDIGQGHHLRDIDGGHQVGDIDRGYHHGDIGQSHRLGDITKSHQLGDIGQGHQLGDIMKSHHLEDIGQSHRLGDITKSHQVGDILKGHQIGDIDQHHRLGDIDGGHHLGDIDQGHHLGDIDQSHQVGDITKSHRVGDILKCHQVGDIDRGYHHGDIGQSHRLGDIDRGHQVGDIDGRHRLGDIGQSHQVGDIDGGHQVGDIRHGHHLGDIMKSRHLGDIDRGHQLGDITKSHQVGDIDRGHRLGDITQGHHLGDIVKSHQFGDIDGGHQVGDIDQSHHLGDILKGHHLGDIDRGHHLGDINQSHRLGDNGEGHQVGDITKSNQVGDILKGQHLGDIDGGHQVVDFGQGHRLGDIDGGHRLGDIGQGHQVGDIDRGHRFGDIGQSHRLGDIRQSHQVGDITQGHHLGDIDQGHHLGDIGQGHRLGDIMKSHRLGDIDQRHRLGDIDGGHHLGDINRGHHLGDIGQSHQLEDIDGGHRLGDITQGHHLGDIMKSHHLGDIDRSHHLGDIGQGHHLGDIRPGATAANLGTLWGHRKRPGEGTGTGTGTKRPRLEPDTDGRLKEEPEELMSDSCGSPPGDVTAEAEPPWAACAGGSSEEEEPTPGGGGGARGGPAPSPPLPHLRFEISSEDGLRVAAPSLEGAWRAVLERLQEARANAHLGHLSFAGMSGLRLLGIQHDAVLFLLEQLPGAGSCSRYRFRYHPPPPGPPRPPPPRNPSGCARAELYMRKCTFDMFSFLASQHRALPQGPPPREEEEDEVQLKPTRRATSLELPMAMRFRHLKRTAKEAVGVYRSA…
SIO_010081: KMT2B
subclass of: SO_0000673
so part of: KMT2B
location: join(947178..947399,948320..948361,949558..949624,951376..951646,955099..955154,962695..962810,965958..966062,967870..967983,970670..970816,974261..974350,975640..975709,976293..976382,977375..977457,977935..978024,980275..980439,981829..981899,982918..983000,984139..984233,988237..988374,998337..998495,1003768..1003888,1006255..1006333,1008234..1008489,1013589..1013668,1013776..1013886,1015105..1017480,1020255..1020296,1022584..1022639,1024655..1024798,1028352..1028426,1034799..1034983,1036537..1036647,1040712..1040795,1043426..1043555,1047488..1047763)
location: region:947178-1047763:1
so has part: feature:947178-947399:1:exon
so has part: feature:948320-948361:1:exon
so has part: feature:949558-949624:1:exon
so has part: feature:951376-951646:1:exon
so has part: feature:955099-955154:1:exon
so has part: feature:962695-962810:1:exon
so has part: feature:965958-966062:1:exon
so has part: feature:967870-967983:1:exon
so has part: feature:970670-970816:1:exon
so has part: feature:974261-974350:1:exon
so has part: feature:975640-975709:1:exon
so has part: feature:976293-976382:1:exon
so has part: feature:977375-977457:1:exon
so has part: feature:977935-978024:1:exon
so has part: feature:980275-980439:1:exon
so has part: feature:981829-981899:1:exon
so has part: feature:982918-983000:1:exon
so has part: feature:984139-984233:1:exon
so has part: feature:988237-988374:1:exon
so has part: feature:998337-998495:1:exon
so has part: feature:1003768-1003888:1:exon
so has part: feature:1006255-1006333:1:exon
so has part: feature:1008234-1008489:1:exon
so has part: feature:1013589-1013668:1:exon
so has part: feature:1013776-1013886:1:exon
so has part: feature:1015105-1017480:1:exon
so has part: feature:1020255-1020296:1:exon
so has part: feature:1022584-1022639:1:exon
so has part: feature:1024655-1024798:1:exon
so has part: feature:1028352-1028426:1:exon
so has part: feature:1034799-1034983:1:exon
so has part: feature:1036537-1036647:1:exon
so has part: feature:1040712-1040795:1:exon
so has part: feature:1043426-1043555:1:exon
so has part: feature:1047488-1047763:1:exon

XP_041568339.1
type: Protein
SIO_000068: ncbiprotein

position:947178:1
position: 947178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1047763:1
position: 1047763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:947178-947399:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:948320-948361:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:949558-949624:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:951376-951646:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:955099-955154:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:962695-962810:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:965958-966062:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:967870-967983:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:970670-970816:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:974261-974350:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:975640-975709:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:976293-976382:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:977375-977457:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:977935-978024:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:980275-980439:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:981829-981899:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:982918-983000:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:984139-984233:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:988237-988374:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:998337-998495:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1003768-1003888:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1006255-1006333:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1008234-1008489:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1013589-1013668:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1013776-1013886:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1015105-1017480:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1020255-1020296:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1022584-1022639:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1024655-1024798:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1028352-1028426:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1034799-1034983:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1036537-1036647:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1040712-1040795:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1043426-1043555:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1047488-1047763:1:exon

LOC121468600
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121468600
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1047911..1048994
location: region:1047911-1048994:1
so has part: feature:1047911-1048994:1:exon
subclass of: SO_0000010

121468600
type: Gene
SIO_000068: ncbigene

position:1047911:1
position: 1047911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1048994:1
position: 1048994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1047911-1048994:1:exon

LOC121468600
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC121468600
product: protein PELPK1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_041712423.1
SIO_010081: LOC121468600
subclass of: SO_0000673
so part of: LOC121468600
location: join(1047911..1048278,1048452..1048994)
location: region:1047911-1048994:1
so has part: feature:1047911-1048278:1:exon
so has part: feature:1048452-1048994:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1047911-1048278:1:exon

position:1048278:1
position: 1048278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1048452-1048994:1:exon

position:1048452:1
position: 1048452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121468600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC121468600
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein PELPK1-like
translation: MVDQEFWRSTKSPGGQPRVVEVNQKLSWSTKSSGGRPKVMVVNQESWRSTKSSGGQPRVVVVDQEFWRSTKSHRGQPKVLEMPPANEKVPKIRRTKFWGVPEALEMPPTNEKVPKIRRTKFWGSPEALEMPPANEKVPKIRRTKFWGSPEAPEMPPANQKVPKIRRTKFRGVPEALEMPPTLRNPLR
SIO_010081: LOC121468600
subclass of: SO_0000673
so part of: LOC121468600
location: join(1048047..1048278,1048452..1048783)
location: region:1048047-1048783:1
so has part: feature:1048047-1048278:1:exon
so has part: feature:1048452-1048783:1:exon

XP_041568357.1
type: Protein
SIO_000068: ncbiprotein

position:1048047:1
position: 1048047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1048783:1
position: 1048783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1048047-1048278:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1048452-1048783:1:exon

LOC115492991
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC115492991
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1054760..1085178
location: region:1054760-1085178:1
so has part: feature:1054760-1085178:1:exon
subclass of: SO_0000010

115492991
type: Gene
SIO_000068: ncbigene

position:1054760:1
position: 1054760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1085178:1
position: 1085178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1054760-1085178:1:exon

LOC115492991
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC115492991
product: kallikrein-13-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041712406.1
SIO_010081: LOC115492991
subclass of: SO_0000673
so part of: LOC115492991
location: join(1054760..1054852,1063556..1063609,1064886..1065066,1068001..1068254,1072415..1072551,1085170..1085178)
location: region:1054760-1085178:1
so has part: feature:1054760-1054852:1:exon
so has part: feature:1063556-1063609:1:exon
so has part: feature:1064886-1065066:1:exon
so has part: feature:1068001-1068254:1:exon
so has part: feature:1072415-1072551:1:exon
so has part: feature:1085170-1085178:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1054760-1054852:1:exon

position:1054852:1
position: 1054852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1063556-1063609:1:exon

position:1063556:1
position: 1063556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1063609:1
position: 1063609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1064886-1065066:1:exon

position:1064886:1
position: 1064886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1065066:1
position: 1065066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1068001-1068254:1:exon

position:1068001:1
position: 1068001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1068254:1
position: 1068254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1072415-1072551:1:exon

position:1072415:1
position: 1072415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1072551:1
position: 1072551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1085170-1085178:1:exon

position:1085170:1
position: 1085170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115492991
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC115492991
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kallikrein-13-like
translation: MRRRHLVVKMVMALLTVTHLTRVTRVTADTRVVGGHACVPHSQPWQVAVLDMYKLYCGGVLVAPRWVVTAAHCTTPGVTTVALGKHRLYAREAGEQRRVVARMVAHPGYDPSTKDNDIMLLKLLVPAAISDRVRPVPVASCLPRPGTACVTSGWGATTSPEVTYPEVLQCVNVSLFSPAECRRFYPDSITDNMVCAGHLQGGRDSCQFL
SIO_010081: LOC115492991
subclass of: SO_0000673
so part of: LOC115492991
location: join(1063561..1063609,1064886..1065066,1068001..1068254,1072415..1072551,1085170..1085178)
location: region:1063561-1085178:1
so has part: feature:1063561-1063609:1:exon
so has part: feature:1064886-1065066:1:exon
so has part: feature:1068001-1068254:1:exon
so has part: feature:1072415-1072551:1:exon
so has part: feature:1085170-1085178:1:exon

XP_041568340.1
type: Protein
SIO_000068: ncbiprotein

position:1063561:1
position: 1063561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1063561-1063609:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1064886-1065066:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1068001-1068254:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1072415-1072551:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1085170-1085178:1:exon

LOC115492965
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC115492965
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1089245..1109176
location: region:1089245-1109176:1
so has part: feature:1089245-1109176:1:exon
subclass of: SO_0000010

115492965
type: Gene
SIO_000068: ncbigene

position:1089245:1
position: 1089245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1109176:1
position: 1109176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1089245-1109176:1:exon

LOC115492965
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC115492965
product: kallikrein-14-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041712407.1
SIO_010081: LOC115492965
subclass of: SO_0000673
so part of: LOC115492965
location: join(1089245..1089287,1094978..1095359,1100604..1100929,1105122..1105258,1107885..1109176)
location: region:1089245-1109176:1
so has part: feature:1089245-1089287:1:exon
so has part: feature:1094978-1095359:1:exon
so has part: feature:1100604-1100929:1:exon
so has part: feature:1105122-1105258:1:exon
so has part: feature:1107885-1109176:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1089245-1089287:1:exon

position:1089287:1
position: 1089287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1094978-1095359:1:exon

position:1094978:1
position: 1094978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1095359:1
position: 1095359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1100604-1100929:1:exon

position:1100604:1
position: 1100604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1100929:1
position: 1100929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1105122-1105258:1:exon

position:1105122:1
position: 1105122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1105258:1
position: 1105258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1107885-1109176:1:exon

position:1107885:1
position: 1107885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115492965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC115492965
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kallikrein-14-like
translation: MRLLLLLLLLPAASGARVPRWVLDGHTCAPPWHTCVSVPLSGVRVPRWVLDGHTCAPPWHTCVCVSLSGVRVPRWGWTGTPVPRPGTPVSLSGVRVPRWVLDGHTCAPPWQVALFRGGRFVCGGTLVAPRWVLTAAHCHAPGPLTVSLGRPSHRQVRPGEPPGEGGSSSSSATPPPGEASPAPGEQRRQVRPFRFPGYNESSKDGDLMLLRLQVPAHLSRQVRPLPPARTCAAPGTTCQISGWGSTTSPQVTFPQELRCSQVRIVPELTCRRTYPDSITPNMVCAGEPHSRADTCQGDSGGPLVCNGRLQGITSWGPGVCGDPRKPGVYVNLCRYGRWLQDTMAQN
SIO_010081: LOC115492965
subclass of: SO_0000673
so part of: LOC115492965
location: join(1089245..1089287,1094978..1095359,1100604..1100929,1105122..1105258,1107885..1108037)
location: region:1089245-1108037:1
so has part: feature:1089245-1089287:1:exon
so has part: feature:1094978-1095359:1:exon
so has part: feature:1100604-1100929:1:exon
so has part: feature:1105122-1105258:1:exon
so has part: feature:1107885-1108037:1:exon

XP_041568341.1
type: Protein
SIO_000068: ncbiprotein

position:1108037:1
position: 1108037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1089245-1089287:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1094978-1095359:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1100604-1100929:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1105122-1105258:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1107885-1108037:1:exon

LOC121468594
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121468594
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1121222..1138726
location: region:1121222-1138726:1
so has part: feature:1121222-1138726:1:exon
subclass of: SO_0000010

121468594
type: Gene
SIO_000068: ncbigene

position:1121222:1
position: 1121222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1138726:1
position: 1138726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1121222-1138726:1:exon

LOC121468594
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC121468594
product: uncharacterized LOC121468594
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 51% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041712408.1
SIO_010081: LOC121468594
subclass of: SO_0000673
so part of: LOC121468594
location: join(1121222..1121410,1124400..1124562,1125341..1125626,1126066..1126141,1126610..1126696,1132784..1132870,1135383..1135519,1136284..1136304,1137223..1137303,1137661..1137708,1137811..1137869,1137911..1138007,1138151..1138209,1138495..1138726)
location: region:1121222-1138726:1
so has part: feature:1121222-1121410:1:exon
so has part: feature:1124400-1124562:1:exon
so has part: feature:1125341-1125626:1:exon
so has part: feature:1126066-1126141:1:exon
so has part: feature:1126610-1126696:1:exon
so has part: feature:1132784-1132870:1:exon
so has part: feature:1135383-1135519:1:exon
so has part: feature:1136284-1136304:1:exon
so has part: feature:1137223-1137303:1:exon
so has part: feature:1137661-1137708:1:exon
so has part: feature:1137811-1137869:1:exon
so has part: feature:1137911-1138007:1:exon
so has part: feature:1138151-1138209:1:exon
so has part: feature:1138495-1138726:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1121222-1121410:1:exon

position:1121410:1
position: 1121410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1124400-1124562:1:exon

position:1124400:1
position: 1124400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1124562:1
position: 1124562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1125341-1125626:1:exon

position:1125341:1
position: 1125341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1125626:1
position: 1125626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1126066-1126141:1:exon

position:1126066:1
position: 1126066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1126141:1
position: 1126141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1126610-1126696:1:exon

position:1126610:1
position: 1126610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1126696:1
position: 1126696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1132784-1132870:1:exon

position:1132784:1
position: 1132784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1132870:1
position: 1132870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1135383-1135519:1:exon

position:1135383:1
position: 1135383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1135519:1
position: 1135519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1136284-1136304:1:exon

position:1136284:1
position: 1136284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1136304:1
position: 1136304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1137223-1137303:1:exon

position:1137223:1
position: 1137223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1137303:1
position: 1137303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1137661-1137708:1:exon

position:1137661:1
position: 1137661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1137708:1
position: 1137708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1137811-1137869:1:exon

position:1137811:1
position: 1137811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1137869:1
position: 1137869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1137911-1138007:1:exon

position:1137911:1
position: 1137911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1138007:1
position: 1138007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1138151-1138209:1:exon