Taeniopygia guttata isolate Blue55 chromosome 32, bTaeGut1.4.pri, whole genome shotgun sequence.
type: Entry
definition: Taeniopygia guttata isolate Blue55 chromosome 32, bTaeGut1.4.pri, whole genome shotgun sequence.
sequence version: NC_054764.1
sequence date: 2021-05-26
sequence: sequence
division: CON
label: NC_054764.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA558048
dblink: SAMN02981239
keyword: WGS
keyword: RefSeq
source: Taeniopygia guttata (zebra finch)
organism: Taeniopygia guttata
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Taeniopygia.
reference: 1
references: 33911273
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM025861.2.\nAssembly name: bTaeGut1.4.pri\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2021/05/04. The original whole-genome shotgun project has the\naccession RRCB00000000.2.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 09-APR-2021\nAssembly Method :: FALCON v. 5.1.1; FALCON unzip v.\n Nov2017(uc4); Purge_dups v. 1.0.1;\n Scaff10X v. 4.1.0; Bionano Solve\n BspQI/BssSI v. 3.4; Salsa2 v. 2.2.; Arrow\n polishing v. variantCaller 2.3.3; Merfin\n filtering v. 0.1; longranger align v.\n 2.2.2; freebayes polishing v. 1.3.1;\n gEVAL manual curation v. 2021-04-09; VGP\n pipeline v. 1.7\nAssembly Name :: bTaeGut1.4.pri\nDiploid :: Principal Pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 88.2x\nSequencing Technology :: PacBio RSII; 10X Genomics linked reads;\n Bionano Genomics two enzymes; Arima\n Genomics Hi-C\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Taeniopygia guttata Annotation\n Release 106\nAnnotation Version :: 106\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.6\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 2089234
topology: linear
so has quality: SO_0000987
location: 1..2089234
location: region:1-2089234:1
RO_0002162: 59729

NC_054764
type: RefSeq
SIO_000068: refseq

PRJNA558048
type: BioProject
SIO_000068: bioproject

SAMN02981239
type: BioSample
SIO_000068: biosample

1
title: Towards complete and error-free genome assemblies of all vertebrate species
author: Rhie, A.
author: McCarthy, S.A.
author: Fedrigo, O.
author: Damas, J.
author: Formenti, G.
author: Koren, S.
author: Uliano-Silva, M.
author: Chow, W.
author: Fungtammasan, A.
author: Kim, J.
author: Lee, C.
author: Ko, B.J.
author: Chaisson, M.
author: Gedman, G.L.
author: Cantin, L.J.
author: Thibaud-Nissen, F.
author: Haggerty, L.
author: Bista, I.
author: Smith, M.
author: Haase, B.
author: Mountcastle, J.
author: Winkler, S.
author: Paez, S.
author: Howard, J.
author: Vernes, S.C.
author: Lama, T.M.
author: Grutzner, F.
author: Warren, W.C.
author: Balakrishnan, C.N.
author: Burt, D.
author: George, J.M.
author: Biegler, M.T.
author: Iorns, D.
author: Digby, A.
author: Eason, D.
author: Robertson, B.
author: Edwards, T.
author: Wilkinson, M.
author: Turner, G.
author: Meyer, A.
author: Kautt, A.F.
author: Franchini, P.
author: Detrich, H.W. 3rd
author: Svardal, H.
author: Wagner, M.
author: Naylor, G.J.P.
author: Pippel, M.
author: Malinsky, M.
author: Mooney, M.
author: Simbirsky, M.
author: Hannigan, B.T.
author: Pesout, T.
author: Houck, M.
author: Misuraca, A.
author: Kingan, S.B.
author: Hall, R.
author: Kronenberg, Z.
author: Sovic, I.
author: Dunn, C.
author: Ning, Z.
author: Hastie, A.
author: Lee, J.
author: Selvaraj, S.
author: Green, R.E.
author: Putnam, N.H.
author: Gut, I.
author: Ghurye, J.
author: Garrison, E.
author: Sims, Y.
author: Collins, J.
author: Pelan, S.
author: Torrance, J.
author: Tracey, A.
author: Wood, J.
author: Dagnew, R.E.
author: Guan, D.
author: London, S.E.
author: Clayton, D.F.

33911273
type: PubMed
SIO_000068: pubmed

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2089234:1
position: 2089234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-2089234:1:source
so part of: sequence
organism: Taeniopygia guttata
mol type: genomic DNA
isolate: Blue55
chromosome: 32
sex: female
tissue type: Muscle, blood, brain
dev stage: adult
country: USA
lat lon: 36.0014 N 78.9382 W
collected by: Matt Biegler, Duke University and Rockefeller University

59729
type: Taxonomy
SIO_000068: taxonomy

PSMB6
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: PSMB6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 16..2412
location: region:16-2412:1
so has part: feature:16-2412:1:exon
subclass of: SO_0000010

121468499
type: Gene
SIO_000068: ncbigene

position:16:1
position: 16
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2412:1
position: 2412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16-2412:1:exon

PSMB6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: PSMB6
product: proteasome 20S subunit beta 6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 5 long SRA reads, 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 155 samples with support for all annotated introns
transcript id: XM_041712195.1
SIO_010081: PSMB6
subclass of: SO_0000673
so part of: PSMB6
location: join(16..141,989..1120,1200..1329,1813..1957,2215..2412)
location: region:16-2412:1
so has part: feature:16-141:1:exon
so has part: feature:989-1120:1:exon
so has part: feature:1200-1329:1:exon
so has part: feature:1813-1957:1:exon
so has part: feature:2215-2412:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16-141:1:exon

position:141:1
position: 141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:989-1120:1:exon

position:989:1
position: 989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1120:1
position: 1120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1200-1329:1:exon

position:1200:1
position: 1200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1329:1
position: 1329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1813-1957:1:exon

position:1813:1
position: 1813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1957:1
position: 1957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2215-2412:1:exon

position:2215:1
position: 2215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PSMB6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: PSMB6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proteasome subunit beta type-6
translation: MAVEFDGGVVIGADSRTTTGAYIANRVTDKLTPVHDRIFCCRSGSAADTQAVADAVAYQLAFHSVELEEPPRVRTAARLFQQSCYRYREELSAGIIVAGWDPRRGGQVYVVPMGGLLLRQPFAVGGSGSSYIYGFLDATFQPGMSRSQCQEFVARALALAMVRDGSSGGVIRLAAITEEGVERTVLAGSDLPWGDGGPPV
SIO_010081: PSMB6
subclass of: SO_0000673
so part of: PSMB6
location: join(83..141,989..1120,1200..1329,1813..1957,2215..2351)
location: region:83-2351:1
so has part: feature:83-141:1:exon
so has part: feature:989-1120:1:exon
so has part: feature:1200-1329:1:exon
so has part: feature:1813-1957:1:exon
so has part: feature:2215-2351:1:exon

XP_041568129.1
type: Protein
SIO_000068: ncbiprotein

position:83:1
position: 83
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2351:1
position: 2351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:83-141:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:989-1120:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1200-1329:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1813-1957:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2215-2351:1:exon

SLC25A11
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: SLC25A11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2546..5737)
location: region:2546-5737:-1
so has part: feature:2546-5737:-1:exon
subclass of: SO_0000010

121468498
type: Gene
SIO_000068: ncbigene

position:2546:-1
position: 2546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5737:-1
position: 5737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2546-5737:-1:exon

SLC25A11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: SLC25A11
product: solute carrier family 25 member 11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 3 long SRA reads, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 159 samples with support for all annotated introns
transcript id: XM_041712194.1
SIO_010081: SLC25A11
subclass of: SO_0000673
so part of: SLC25A11
location: complement(join(2546..3264,3659..3710,3819..3918,4011..4101,4312..4402,4500..4706,4942..5094,5566..5737))
location: region:2546-5737:-1
so has part: feature:5566-5737:-1:exon
so has part: feature:4942-5094:-1:exon
so has part: feature:4500-4706:-1:exon
so has part: feature:4312-4402:-1:exon
so has part: feature:4011-4101:-1:exon
so has part: feature:3819-3918:-1:exon
so has part: feature:3659-3710:-1:exon
so has part: feature:2546-3264:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5566-5737:-1:exon

position:5566:-1
position: 5566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4942-5094:-1:exon

position:4942:-1
position: 4942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5094:-1
position: 5094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4500-4706:-1:exon

position:4500:-1
position: 4500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4706:-1
position: 4706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4312-4402:-1:exon

position:4312:-1
position: 4312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4402:-1
position: 4402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4011-4101:-1:exon

position:4011:-1
position: 4011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4101:-1
position: 4101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3819-3918:-1:exon

position:3819:-1
position: 3819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3918:-1
position: 3918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3659-3710:-1:exon

position:3659:-1
position: 3659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3710:-1
position: 3710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2546-3264:-1:exon

position:3264:-1
position: 3264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC25A11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: SLC25A11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial 2-oxoglutarate/malate carrier protein
translation: MAAVPAAQRPKTSPKSVKFLFGGLAGMGATVFVQPLDLVKNRMQLSGAGAKGREYRTSLHALGSILRHEGLRGIYTGLSAGLLRQATYTTTRLGIYSVLLERFGGADGTPPPFLAKAAMGMTAGAAGAFVGTPAEVALIRMTADGRLPPGERRGYHNVFDALVRMAREEGVLTLWRGCIPTMARAVVVNAAQLASYSQSKQFLLDSGHFRDDILCHFCASMISGLVTTAASMPVDIVKTRIQNMRTIDGKPEYRNGLDVLLKVVRYEGFFSLWKGFTPYYARLGPHTVLTFIFLEQMNKWYQRLFLSA
SIO_010081: SLC25A11
subclass of: SO_0000673
so part of: SLC25A11
location: complement(join(3109..3264,3659..3710,3819..3918,4011..4101,4312..4402,4500..4706,4942..5094,5566..5642))
location: region:3109-5642:-1
so has part: feature:5566-5642:-1:exon
so has part: feature:4942-5094:-1:exon
so has part: feature:4500-4706:-1:exon
so has part: feature:4312-4402:-1:exon
so has part: feature:4011-4101:-1:exon
so has part: feature:3819-3918:-1:exon
so has part: feature:3659-3710:-1:exon
so has part: feature:3109-3264:-1:exon

XP_041568128.1
type: Protein
SIO_000068: ncbiprotein

position:3109:-1
position: 3109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5642:-1
position: 5642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5566-5642:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4942-5094:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4500-4706:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4312-4402:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4011-4101:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3819-3918:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3659-3710:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3109-3264:-1:exon

LOC121468501
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121468501
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5828..7431
location: region:5828-7431:1
so has part: feature:5828-7431:1:exon
subclass of: SO_0000011

121468501
type: Gene
SIO_000068: ncbigene

position:5828:1
position: 5828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7431:1
position: 7431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5828-7431:1:exon

LOC121468501
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC121468501
product: uncharacterized LOC121468501
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XR_005978435.1
SIO_010081: LOC121468501
subclass of: SO_0000673
so part of: LOC121468501
location: join(5828..6092,6408..7431)
location: region:5828-7431:1
so has part: feature:5828-6092:1:exon
so has part: feature:6408-7431:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5828-6092:1:exon

position:6092:1
position: 6092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6408-7431:1:exon

position:6408:1
position: 6408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PFN1
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: PFN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7666..10095)
location: region:7666-10095:-1
so has part: feature:7666-10095:-1:exon
subclass of: SO_0000010

121468500
type: Gene
SIO_000068: ncbigene

position:7666:-1
position: 7666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10095:-1
position: 10095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7666-10095:-1:exon

PFN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: PFN1
product: profilin 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, 4 long SRA reads, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 153 samples with support for all annotated introns
transcript id: XM_041712196.1
SIO_010081: PFN1
subclass of: SO_0000673
so part of: PFN1
location: complement(join(7666..7894,8440..8632,9838..10095))
location: region:7666-10095:-1
so has part: feature:9838-10095:-1:exon
so has part: feature:8440-8632:-1:exon
so has part: feature:7666-7894:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9838-10095:-1:exon

position:9838:-1
position: 9838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8440-8632:-1:exon

position:8440:-1
position: 8440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8632:-1
position: 8632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7666-7894:-1:exon

position:7894:-1
position: 7894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PFN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: PFN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: profilin-1
translation: MSGWAPYVETLLADGTCQDAAIVGYRDTPAVWAAAPGKTFANITPAEVAALVGPERGPLLVQGLTLGGLRCSVIRDSLLVEGEHSMDLRTKGAAGAPTFNITAAITNKTIVLAMGKEGVHGGCVNKKCYEMANHLRRSQY
SIO_010081: PFN1
subclass of: SO_0000673
so part of: PFN1
location: complement(join(7797..7894,8440..8632,9838..9969))
location: region:7797-9969:-1
so has part: feature:9838-9969:-1:exon
so has part: feature:8440-8632:-1:exon
so has part: feature:7797-7894:-1:exon

XP_041568130.1
type: Protein
SIO_000068: ncbiprotein

position:7797:-1
position: 7797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9969:-1
position: 9969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9838-9969:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8440-8632:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7797-7894:-1:exon

LOC121468512
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121468512
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 11462..13307
location: region:11462-13307:1
so has part: feature:11462-13307:1:exon
subclass of: SO_0000011

121468512
type: Gene
SIO_000068: ncbigene

position:11462:1
position: 11462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13307:1
position: 13307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11462-13307:1:exon

LOC121468512
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC121468512
product: uncharacterized LOC121468512
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XR_005978440.1
SIO_010081: LOC121468512
subclass of: SO_0000673
so part of: LOC121468512
location: join(11462..11760,12550..13307)
location: region:11462-13307:1
so has part: feature:11462-11760:1:exon
so has part: feature:12550-13307:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11462-11760:1:exon

position:11760:1
position: 11760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:12550-13307:1:exon

position:12550:1
position: 12550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SPAG7
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: SPAG7
note: sperm associated antigen 7; Derived by automated computational analysis using gene prediction method: BestRefSeq,Gnomon.
so part of: sequence
location: complement(13431..15819)
location: region:13431-15819:-1
so has part: feature:13431-15819:-1:exon
subclass of: SO_0000010

100190128
type: Gene
SIO_000068: ncbigene

position:13431:-1
position: 13431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15819:-1
position: 15819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13431-15819:-1:exon

SPAG7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: SPAG7
product: sperm associated antigen 7, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 139 samples with support for all annotated introns
transcript id: XM_041712151.1
SIO_010081: SPAG7
subclass of: SO_0000673
so part of: SPAG7
location: complement(join(13431..13644,13757..13913,14098..14187,14266..14350,14669..14757,14855..14922,15649..15819))
location: region:13431-15819:-1
so has part: feature:15649-15819:-1:exon
so has part: feature:14855-14922:-1:exon
so has part: feature:14669-14757:-1:exon
so has part: feature:14266-14350:-1:exon
so has part: feature:14098-14187:-1:exon
so has part: feature:13757-13913:-1:exon
so has part: feature:13431-13644:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15649-15819:-1:exon

position:15649:-1
position: 15649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:14855-14922:-1:exon

position:14855:-1
position: 14855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14922:-1
position: 14922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:14669-14757:-1:exon

position:14669:-1
position: 14669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14757:-1
position: 14757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:14266-14350:-1:exon

position:14266:-1
position: 14266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14350:-1
position: 14350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:14098-14187:-1:exon

position:14098:-1
position: 14098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14187:-1
position: 14187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:13757-13913:-1:exon

position:13757:-1
position: 13757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13913:-1
position: 13913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:13431-13644:-1:exon

position:13644:-1
position: 13644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SPAG7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: SPAG7
product: sperm associated antigen 7
inference: similar to RNA sequence, mRNA (same species):RefSeq:NM_001245615.1
exception: annotated by transcript or proteomic data
note: The RefSeq transcript has 3 substitutions, 1 frameshift, 1 non-frameshifting indel compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001245615.1
SIO_010081: SPAG7
subclass of: SO_0000673
so part of: SPAG7
location: complement(join(13433..13644,13757..13858,14729..14757,14855..14922,15649..15759))
location: region:13433-15759:-1
so has part: feature:15649-15759:-1:exon
so has part: feature:14855-14922:-1:exon
so has part: feature:14729-14757:-1:exon
so has part: feature:13757-13858:-1:exon
so has part: feature:13433-13644:-1:exon

position:13433:-1
position: 13433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15759:-1
position: 15759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15649-15759:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:14855-14922:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:14729-14757:-1:exon

position:14729:-1
position: 14729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:13757-13858:-1:exon

position:13858:-1
position: 13858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:13433-13644:-1:exon

SPAG7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: SPAG7
inference: similar to AA sequence (same species):RefSeq:NP_001232544.1
exception: annotated by transcript or proteomic data
note: The RefSeq protein has 2 substitutions, 1 frameshift compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
transl except: (pos:complement(13489..13491),aa:Tyr)
product: sperm-associated antigen 7
translation: MAELDLLGSILNSMERPPAAADGETRRRAREQAARMKKLQEQEKRQKVEFRKRMEQEVSQFIQAPQRLQGQIPAPDRLRRRQSRRPHHGGQQGVRLRAGGQQAGHALHRRGHERDPRQEAAAAGGGRGRGRGGCRGSRCXEGGTHGGIYQRGEGGGDAQRG
SIO_010081: SPAG7
subclass of: SO_0000673
so part of: SPAG7
location: complement(join(13450..13644,13757..13858,14729..14757,14855..14922,15649..15739))
location: region:13450-15739:-1
so has part: feature:15649-15739:-1:exon
so has part: feature:14855-14922:-1:exon
so has part: feature:14729-14757:-1:exon
so has part: feature:13757-13858:-1:exon
so has part: feature:13450-13644:-1:exon

NP_001232544.1
type: Protein
SIO_000068: ncbiprotein

position:13450:-1
position: 13450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15739:-1
position: 15739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15649-15739:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:14855-14922:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:14729-14757:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13757-13858:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13450-13644:-1:exon

SPAG7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: SPAG7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sperm-associated antigen 7 isoform X1
translation: MTQHAPGARRHAPPRRKMAELDLLGSILNSMERPPAAADGETRRRAREQAARMKKLQEQEKRQKVEFRKRMEQEVSQFIQATGEPRRRFQPMNKIERSILHDVAEVAGLTSFSFGDDEDSRYVMVFKKEFAPSDEELEAYRRGEEWDPARAEERRRLRELAAQQEEAELERGPAPPGPPNDYKDKYRHLIGSDAAKAAARTMEANKAYGCVPVANKRDTRSIEEAMNEIRAKKRLRQAEDEGGAGGGAGGPGV
SIO_010081: SPAG7
subclass of: SO_0000673
so part of: SPAG7
location: complement(join(13514..13644,13757..13913,14098..14187,14266..14350,14669..14757,14855..14922,15649..15790))
location: region:13514-15790:-1
so has part: feature:15649-15790:-1:exon
so has part: feature:14855-14922:-1:exon
so has part: feature:14669-14757:-1:exon
so has part: feature:14266-14350:-1:exon
so has part: feature:14098-14187:-1:exon
so has part: feature:13757-13913:-1:exon
so has part: feature:13514-13644:-1:exon

XP_041568085.1
type: Protein
SIO_000068: ncbiprotein

position:13514:-1
position: 13514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15790:-1
position: 15790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15649-15790:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:14855-14922:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:14669-14757:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:14266-14350:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:14098-14187:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13757-13913:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13514-13644:-1:exon

CAMTA2
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: CAMTA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(17047..26071)
location: region:17047-26071:-1
so has part: feature:17047-26071:-1:exon
subclass of: SO_0000010

121468511
type: Gene
SIO_000068: ncbigene

position:17047:-1
position: 17047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26071:-1
position: 26071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17047-26071:-1:exon

CAMTA2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: CAMTA2
product: calmodulin binding transcription activator 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 74 samples with support for all annotated introns
transcript id: XM_041712214.1
SIO_010081: CAMTA2
subclass of: SO_0000673
so part of: CAMTA2
location: complement(join(17047..17392,17538..17612,17688..17830,18171..18242,18323..18527,18847..19058,19151..19320,19626..19860,20002..20080,20271..20482,20748..20872,21016..21153,21232..21355,21429..22141,22615..22755,23151..23340,23419..23490,24191..24326,24407..24474,24797..24897,24974..25063,26028..26071))
location: region:17047-26071:-1
so has part: feature:26028-26071:-1:exon
so has part: feature:24974-25063:-1:exon
so has part: feature:24797-24897:-1:exon
so has part: feature:24407-24474:-1:exon
so has part: feature:24191-24326:-1:exon
so has part: feature:23419-23490:-1:exon
so has part: feature:23151-23340:-1:exon
so has part: feature:22615-22755:-1:exon
so has part: feature:21429-22141:-1:exon
so has part: feature:21232-21355:-1:exon
so has part: feature:21016-21153:-1:exon
so has part: feature:20748-20872:-1:exon
so has part: feature:20271-20482:-1:exon
so has part: feature:20002-20080:-1:exon
so has part: feature:19626-19860:-1:exon
so has part: feature:19151-19320:-1:exon
so has part: feature:18847-19058:-1:exon
so has part: feature:18323-18527:-1:exon
so has part: feature:18171-18242:-1:exon
so has part: feature:17688-17830:-1:exon
so has part: feature:17538-17612:-1:exon
so has part: feature:17047-17392:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:26028-26071:-1:exon

position:26028:-1
position: 26028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:24974-25063:-1:exon

position:24974:-1
position: 24974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25063:-1
position: 25063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:24797-24897:-1:exon

position:24797:-1
position: 24797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24897:-1
position: 24897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:24407-24474:-1:exon

position:24407:-1
position: 24407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24474:-1
position: 24474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:24191-24326:-1:exon

position:24191:-1
position: 24191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24326:-1
position: 24326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:23419-23490:-1:exon

position:23419:-1
position: 23419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23490:-1
position: 23490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:23151-23340:-1:exon

position:23151:-1
position: 23151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23340:-1
position: 23340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:22615-22755:-1:exon

position:22615:-1
position: 22615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22755:-1
position: 22755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:21429-22141:-1:exon

position:21429:-1
position: 21429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22141:-1
position: 22141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:21232-21355:-1:exon

position:21232:-1
position: 21232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21355:-1
position: 21355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:21016-21153:-1:exon

position:21016:-1
position: 21016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21153:-1
position: 21153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:20748-20872:-1:exon

position:20748:-1
position: 20748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20872:-1
position: 20872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:20271-20482:-1:exon

position:20271:-1
position: 20271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20482:-1
position: 20482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:20002-20080:-1:exon

position:20002:-1
position: 20002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20080:-1
position: 20080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:19626-19860:-1:exon

position:19626:-1
position: 19626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19860:-1
position: 19860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:19151-19320:-1:exon

position:19151:-1
position: 19151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19320:-1
position: 19320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:18847-19058:-1:exon

position:18847:-1
position: 18847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19058:-1
position: 19058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:18323-18527:-1:exon

position:18323:-1
position: 18323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18527:-1
position: 18527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:18171-18242:-1:exon

position:18171:-1
position: 18171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18242:-1
position: 18242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:17688-17830:-1:exon

position:17688:-1
position: 17688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17830:-1
position: 17830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:17538-17612:-1:exon

position:17538:-1
position: 17538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17612:-1
position: 17612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:17047-17392:-1:exon

position:17392:-1
position: 17392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CAMTA2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: CAMTA2
product: calmodulin binding transcription activator 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 74 samples with support for all annotated introns
transcript id: XM_041712212.1
SIO_010081: CAMTA2
subclass of: SO_0000673
so part of: CAMTA2
location: complement(join(17047..17392,17538..17830,18171..18242,18323..18527,18847..19058,19151..19320,19626..19860,20002..20080,20271..20482,20748..20872,21016..21153,21232..21355,21429..22141,22615..22755,23151..23340,23419..23490,24191..24326,24407..24474,24797..24897,24974..25063,26028..26071))
location: region:17047-26071:-1
so has part: feature:26028-26071:-1:exon
so has part: feature:24974-25063:-1:exon
so has part: feature:24797-24897:-1:exon
so has part: feature:24407-24474:-1:exon
so has part: feature:24191-24326:-1:exon
so has part: feature:23419-23490:-1:exon
so has part: feature:23151-23340:-1:exon
so has part: feature:22615-22755:-1:exon
so has part: feature:21429-22141:-1:exon
so has part: feature:21232-21355:-1:exon
so has part: feature:21016-21153:-1:exon
so has part: feature:20748-20872:-1:exon
so has part: feature:20271-20482:-1:exon
so has part: feature:20002-20080:-1:exon
so has part: feature:19626-19860:-1:exon
so has part: feature:19151-19320:-1:exon
so has part: feature:18847-19058:-1:exon
so has part: feature:18323-18527:-1:exon
so has part: feature:18171-18242:-1:exon
so has part: feature:17538-17830:-1:exon
so has part: feature:17047-17392:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:26028-26071:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:24974-25063:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:24797-24897:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:24407-24474:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:24191-24326:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:23419-23490:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:23151-23340:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:22615-22755:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:21429-22141:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:21232-21355:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:21016-21153:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:20748-20872:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:20271-20482:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:20002-20080:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:19626-19860:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:19151-19320:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:18847-19058:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:18323-18527:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:18171-18242:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:17538-17830:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:17047-17392:-1:exon

CAMTA2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: CAMTA2
product: calmodulin binding transcription activator 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 70 samples with support for all annotated introns
transcript id: XM_041712213.1
SIO_010081: CAMTA2
subclass of: SO_0000673
so part of: CAMTA2
location: complement(join(17047..17392,17538..17612,17688..17830,18053..18073,18171..18242,18323..18527,18847..19058,19151..19320,19626..19860,20002..20080,20271..20482,20748..20872,21016..21153,21232..21355,21429..22141,22615..22755,23151..23340,23419..23490,24191..24326,24407..24474,24797..24897,24974..25063,26028..26071))
location: region:17047-26071:-1
so has part: feature:26028-26071:-1:exon
so has part: feature:24974-25063:-1:exon
so has part: feature:24797-24897:-1:exon
so has part: feature:24407-24474:-1:exon
so has part: feature:24191-24326:-1:exon
so has part: feature:23419-23490:-1:exon
so has part: feature:23151-23340:-1:exon
so has part: feature:22615-22755:-1:exon
so has part: feature:21429-22141:-1:exon
so has part: feature:21232-21355:-1:exon
so has part: feature:21016-21153:-1:exon
so has part: feature:20748-20872:-1:exon
so has part: feature:20271-20482:-1:exon
so has part: feature:20002-20080:-1:exon
so has part: feature:19626-19860:-1:exon
so has part: feature:19151-19320:-1:exon
so has part: feature:18847-19058:-1:exon
so has part: feature:18323-18527:-1:exon
so has part: feature:18171-18242:-1:exon
so has part: feature:18053-18073:-1:exon
so has part: feature:17688-17830:-1:exon
so has part: feature:17538-17612:-1:exon
so has part: feature:17047-17392:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:26028-26071:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:24974-25063:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:24797-24897:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:24407-24474:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:24191-24326:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:23419-23490:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:23151-23340:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:22615-22755:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:21429-22141:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:21232-21355:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:21016-21153:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:20748-20872:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:20271-20482:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:20002-20080:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:19626-19860:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:19151-19320:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:18847-19058:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:18323-18527:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:18171-18242:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:18053-18073:-1:exon

position:18053:-1
position: 18053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18073:-1
position: 18073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:17688-17830:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:17538-17612:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:17047-17392:-1:exon

CAMTA2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: CAMTA2
product: calmodulin binding transcription activator 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 70 samples with support for all annotated introns
transcript id: XM_041712211.1
SIO_010081: CAMTA2
subclass of: SO_0000673
so part of: CAMTA2
location: complement(join(17047..17392,17538..17830,18053..18073,18171..18242,18323..18527,18847..19058,19151..19320,19626..19860,20002..20080,20271..20482,20748..20872,21016..21153,21232..21355,21429..22141,22615..22755,23151..23340,23419..23490,24191..24326,24407..24474,24797..24897,24974..25063,26028..26071))
location: region:17047-26071:-1
so has part: feature:26028-26071:-1:exon
so has part: feature:24974-25063:-1:exon
so has part: feature:24797-24897:-1:exon
so has part: feature:24407-24474:-1:exon
so has part: feature:24191-24326:-1:exon
so has part: feature:23419-23490:-1:exon
so has part: feature:23151-23340:-1:exon
so has part: feature:22615-22755:-1:exon
so has part: feature:21429-22141:-1:exon
so has part: feature:21232-21355:-1:exon
so has part: feature:21016-21153:-1:exon
so has part: feature:20748-20872:-1:exon
so has part: feature:20271-20482:-1:exon
so has part: feature:20002-20080:-1:exon
so has part: feature:19626-19860:-1:exon
so has part: feature:19151-19320:-1:exon
so has part: feature:18847-19058:-1:exon
so has part: feature:18323-18527:-1:exon
so has part: feature:18171-18242:-1:exon
so has part: feature:18053-18073:-1:exon
so has part: feature:17538-17830:-1:exon
so has part: feature:17047-17392:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:26028-26071:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:24974-25063:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:24797-24897:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:24407-24474:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:24191-24326:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:23419-23490:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:23151-23340:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:22615-22755:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:21429-22141:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:21232-21355:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:21016-21153:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:20748-20872:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:20271-20482:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:20002-20080:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:19626-19860:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:19151-19320:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:18847-19058:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:18323-18527:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:18171-18242:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:18053-18073:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:17538-17830:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:17047-17392:-1:exon

CAMTA2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: CAMTA2
product: calmodulin binding transcription activator 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 75 samples with support for all annotated introns
transcript id: XM_041712215.1
SIO_010081: CAMTA2
subclass of: SO_0000673
so part of: CAMTA2
location: complement(join(17047..17392,17538..17830,18053..18073,18171..18242,18323..18527,18847..19058,19151..19320,19626..19860,20002..20080,20271..20482,20748..20872,21016..21153,21232..21355,21429..22141,22615..22755,23151..23340,23419..23490,24191..24286,24407..24474))
location: region:17047-24474:-1
so has part: feature:24407-24474:-1:exon
so has part: feature:24191-24286:-1:exon
so has part: feature:23419-23490:-1:exon
so has part: feature:23151-23340:-1:exon
so has part: feature:22615-22755:-1:exon
so has part: feature:21429-22141:-1:exon
so has part: feature:21232-21355:-1:exon
so has part: feature:21016-21153:-1:exon
so has part: feature:20748-20872:-1:exon
so has part: feature:20271-20482:-1:exon
so has part: feature:20002-20080:-1:exon
so has part: feature:19626-19860:-1:exon
so has part: feature:19151-19320:-1:exon
so has part: feature:18847-19058:-1:exon
so has part: feature:18323-18527:-1:exon
so has part: feature:18171-18242:-1:exon
so has part: feature:18053-18073:-1:exon
so has part: feature:17538-17830:-1:exon
so has part: feature:17047-17392:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:24407-24474:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:24191-24286:-1:exon

position:24286:-1
position: 24286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:23419-23490:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:23151-23340:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:22615-22755:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:21429-22141:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:21232-21355:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:21016-21153:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:20748-20872:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:20271-20482:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:20002-20080:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:19626-19860:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:19151-19320:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:18847-19058:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:18323-18527:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:18171-18242:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:18053-18073:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:17538-17830:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:17047-17392:-1:exon

CAMTA2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: CAMTA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calmodulin-binding transcription activator 2 isoform X4
translation: MSSKEPPEVSERSHLKVFLPRKLVECLPKCPVLPKEQLRWNTNEEIASYLITFEKHDEWLSCSPKTRPQNGSVILYNRKKVKYRKDGYCWKKRKDGKTTREDHMKLKVQGVECLYGCYVHSSIVPTFHRRCYWLLQNPDIVLVHYLNVPAMEECGRPCAPRLCSPPLCAGAPPICAAAADPREWLKWSQEELVAQLRPMFHGVKWGCGNGGAAPGLSLEQLVQHVLERHQARPPPRTHACLCAGGLGAPGHKCSSTKHRIISPKVERGGEGDPPKPAPSSPDTTQPSPGLGGGSAPPEGSRAPPFPPAGGLPLLVVASLGGGAAPGGPEQPLGLTPSQHLVTPEGTCPTAPPPPAAFDPDCFLNSPRRGQTYGCEAEAPPGAPPRPPTAAPKLEEDEEEAEEEEEQEGKEAAVPQDPLCELSAAPPPQPPFPLPFPELLVGDTGVPPNLREPPHTPHLPSSPTGPPSDPPVAITDFSPEWSYPEGGVKVLITGPWGDPGAYSCLFDRTSVPAALVQPGVLRCYCPPHEAGVAALRVACPPRLLSAAAPFEYRARGAARGPPGAQLDWLALDEAQFRLSILERLEQLETRLGALPPPAPLPPPRGGPSESPPEQGPGSSFEARVVAICEAMMARPGWSGTSLGTSLGTSGTSVLAHGATFRGMTLLHLAAAQGYAGLVEALRRWRALAVESLELEQEIDPLNVDHFSCTPLMWACALGHREAAERLCRWDRRALAVPDTLGRLPLALARARGHLALVTRLEELQMSPVSPRCHLPGLRIPSPLSASPDTGLSTASSLSSPSGLSEGPGSVPLPPGPPGPCEDDSWGVAVPPSPPEDALTLPSDTLQAEVVTLARQIIEATPERIKQEAPGGPLGALGAAGGTPGTTGTTGPAGLGAAMAWLATYLESVDRPPAPANRAEAASRGSPGVPERPPPPSAAGWAEFLNASGGARGEGGAVALLTLSDQEQHELYEAARLVQGAFRKYRGRRLKEQQELAAAVIQRCYRKYKQFALFQRMTQAAILIQSKFRSYAEQKRFQRRRRAAVLIQQRFRSLRQHRSTFLTLKQDQAARKIMRFLRRCRHRMEELKQNKEVDSLQTRGLAS
SIO_010081: CAMTA2
subclass of: SO_0000673
so part of: CAMTA2
location: complement(join(17329..17392,17538..17612,17688..17830,18171..18242,18323..18527,18847..19058,19151..19320,19626..19860,20002..20080,20271..20482,20748..20872,21016..21153,21232..21355,21429..22141,22615..22755,23151..23340,23419..23490,24191..24326,24407..24474,24797..24897,24974..25004))
location: region:17329-25004:-1
so has part: feature:24974-25004:-1:exon
so has part: feature:24797-24897:-1:exon
so has part: feature:24407-24474:-1:exon
so has part: feature:24191-24326:-1:exon
so has part: feature:23419-23490:-1:exon
so has part: feature:23151-23340:-1:exon
so has part: feature:22615-22755:-1:exon
so has part: feature:21429-22141:-1:exon
so has part: feature:21232-21355:-1:exon
so has part: feature:21016-21153:-1:exon
so has part: feature:20748-20872:-1:exon
so has part: feature:20271-20482:-1:exon
so has part: feature:20002-20080:-1:exon
so has part: feature:19626-19860:-1:exon
so has part: feature:19151-19320:-1:exon
so has part: feature:18847-19058:-1:exon
so has part: feature:18323-18527:-1:exon
so has part: feature:18171-18242:-1:exon
so has part: feature:17688-17830:-1:exon
so has part: feature:17538-17612:-1:exon
so has part: feature:17329-17392:-1:exon

XP_041568148.1
type: Protein
SIO_000068: ncbiprotein

position:17329:-1
position: 17329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25004:-1
position: 25004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24974-25004:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:24797-24897:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:24407-24474:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:24191-24326:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:23419-23490:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:23151-23340:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:22615-22755:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:21429-22141:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:21232-21355:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:21016-21153:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:20748-20872:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:20271-20482:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:20002-20080:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:19626-19860:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:19151-19320:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:18847-19058:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:18323-18527:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:18171-18242:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:17688-17830:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:17538-17612:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:17329-17392:-1:exon

CAMTA2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: CAMTA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calmodulin-binding transcription activator 2 isoform X2
translation: MSSKEPPEVSERSHLKVFLPRKLVECLPKCPVLPKEQLRWNTNEEIASYLITFEKHDEWLSCSPKTRPQNGSVILYNRKKVKYRKDGYCWKKRKDGKTTREDHMKLKVQGVECLYGCYVHSSIVPTFHRRCYWLLQNPDIVLVHYLNVPAMEECGRPCAPRLCSPPLCAGAPPICAAAADPREWLKWSQEELVAQLRPMFHGVKWGCGNGGAAPGLSLEQLVQHVLERHQARPPPRTHACLCAGGLGAPGHKCSSTKHRIISPKVERGGEGDPPKPAPSSPDTTQPSPGLGGGSAPPEGSRAPPFPPAGGLPLLVVASLGGGAAPGGPEQPLGLTPSQHLVTPEGTCPTAPPPPAAFDPDCFLNSPRRGQTYGCEAEAPPGAPPRPPTAAPKLEEDEEEAEEEEEQEGKEAAVPQDPLCELSAAPPPQPPFPLPFPELLVGDTGVPPNLREPPHTPHLPSSPTGPPSDPPVAITDFSPEWSYPEGGVKVLITGPWGDPGAYSCLFDRTSVPAALVQPGVLRCYCPPHEAGVAALRVACPPRLLSAAAPFEYRARGAARGPPGAQLDWLALDEAQFRLSILERLEQLETRLGALPPPAPLPPPRGGPSESPPEQGPGSSFEARVVAICEAMMARPGWSGTSLGTSLGTSGTSVLAHGATFRGMTLLHLAAAQGYAGLVEALRRWRALAVESLELEQEIDPLNVDHFSCTPLMWACALGHREAAERLCRWDRRALAVPDTLGRLPLALARARGHLALVTRLEELQMSPVSPRCHLPGLRIPSPLSASPDTGLSTASSLSSPSGLSEGPGSVPLPPGPPGPCEDDSWGVAVPPSPPEDALTLPSDTLQAEVVTLARQIIEATPERIKQEAPGGPLGALGAAGGTPGTTGTTGPAGLGAAMAWLATYLESVDRPPAPANRAEAASRGSPGVPERPPPPSAAGWAEFLNASGGARGEGGAVALLTLSDQEQHELYEAARLVQGAFRKYRGRRLKEQQELAAAVIQRCYRKYKQFALFQRMTQAAILIQSKFRSYAEQKRFQRRRRAAVLIQQRFRSLRQHRCGRGTRGTRGAGGTGVLTLLSIPPRSTFLTLKQDQAARKIMRFLRRCRHRMEELKQNKEVDSLQTRGLAS
SIO_010081: CAMTA2
subclass of: SO_0000673
so part of: CAMTA2
location: complement(join(17329..17392,17538..17830,18171..18242,18323..18527,18847..19058,19151..19320,19626..19860,20002..20080,20271..20482,20748..20872,21016..21153,21232..21355,21429..22141,22615..22755,23151..23340,23419..23490,24191..24326,24407..24474,24797..24897,24974..25004))
location: region:17329-25004:-1
so has part: feature:24974-25004:-1:exon
so has part: feature:24797-24897:-1:exon
so has part: feature:24407-24474:-1:exon
so has part: feature:24191-24326:-1:exon
so has part: feature:23419-23490:-1:exon
so has part: feature:23151-23340:-1:exon
so has part: feature:22615-22755:-1:exon
so has part: feature:21429-22141:-1:exon
so has part: feature:21232-21355:-1:exon
so has part: feature:21016-21153:-1:exon
so has part: feature:20748-20872:-1:exon
so has part: feature:20271-20482:-1:exon
so has part: feature:20002-20080:-1:exon
so has part: feature:19626-19860:-1:exon
so has part: feature:19151-19320:-1:exon
so has part: feature:18847-19058:-1:exon
so has part: feature:18323-18527:-1:exon
so has part: feature:18171-18242:-1:exon
so has part: feature:17538-17830:-1:exon
so has part: feature:17329-17392:-1:exon

XP_041568146.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24974-25004:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:24797-24897:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:24407-24474:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:24191-24326:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:23419-23490:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:23151-23340:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:22615-22755:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:21429-22141:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:21232-21355:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:21016-21153:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:20748-20872:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:20271-20482:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:20002-20080:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:19626-19860:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:19151-19320:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:18847-19058:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:18323-18527:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:18171-18242:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:17538-17830:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:17329-17392:-1:exon

CAMTA2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: CAMTA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calmodulin-binding transcription activator 2 isoform X3
translation: MSSKEPPEVSERSHLKVFLPRKLVECLPKCPVLPKEQLRWNTNEEIASYLITFEKHDEWLSCSPKTRPQNGSVILYNRKKVKYRKDGYCWKKRKDGKTTREDHMKLKVQGVECLYGCYVHSSIVPTFHRRCYWLLQNPDIVLVHYLNVPAMEECGRPCAPRLCSPPLCAGAPPICAAAADPREWLKWSQEELVAQLRPMFHGVKWGCGNGGAAPGLSLEQLVQHVLERHQARPPPRTHACLCAGGLGAPGHKCSSTKHRIISPKVERGGEGDPPKPAPSSPDTTQPSPGLGGGSAPPEGSRAPPFPPAGGLPLLVVASLGGGAAPGGPEQPLGLTPSQHLVTPEGTCPTAPPPPAAFDPDCFLNSPRRGQTYGCEAEAPPGAPPRPPTAAPKLEEDEEEAEEEEEQEGKEAAVPQDPLCELSAAPPPQPPFPLPFPELLVGDTGVPPNLREPPHTPHLPSSPTGPPSDPPVAITDFSPEWSYPEGGVKVLITGPWGDPGAYSCLFDRTSVPAALVQPGVLRCYCPPHEAGVAALRVACPPRLLSAAAPFEYRARGAARGPPGAQLDWLALDEAQFRLSILERLEQLETRLGALPPPAPLPPPRGGPSESPPEQGPGSSFEARVVAICEAMMARPGWSGTSLGTSLGTSGTSVLAHGATFRGMTLLHLAAAQGYAGLVEALRRWRALAVESLELEQEIDPLNVDHFSCTPLMWACALGHREAAERLCRWDRRALAVPDTLGRLPLALARARGHLALVTRLEELQMSPVSPRCHLPGLRIPSPLSASPDTGLSTASSLSSPSGLSEGPGSVPLPPGPPGPCEDDSWGVAVPPSPPEDALTLPSDTLQAEVVTLARQIIEATPERIKQEAPGGPLGALGAAGGTPGTTGTTGPAGLGAAMAWLATYLESVDRPPAPANRAEAASRGSPGVPERPPPPSAAGWAEFLNASGGARGEGGAVALLTLSDQEQHELYEAARLVQGAFRKYRGRRLKEQQELAAAVIQRCYRKYKQLTWIALKFALFQRMTQAAILIQSKFRSYAEQKRFQRRRRAAVLIQQRFRSLRQHRSTFLTLKQDQAARKIMRFLRRCRHRMEELKQNKEVDSLQTRGLAS
SIO_010081: CAMTA2
subclass of: SO_0000673
so part of: CAMTA2
location: complement(join(17329..17392,17538..17612,17688..17830,18053..18073,18171..18242,18323..18527,18847..19058,19151..19320,19626..19860,20002..20080,20271..20482,20748..20872,21016..21153,21232..21355,21429..22141,22615..22755,23151..23340,23419..23490,24191..24326,24407..24474,24797..24897,24974..25004))
location: region:17329-25004:-1
so has part: feature:24974-25004:-1:exon
so has part: feature:24797-24897:-1:exon
so has part: feature:24407-24474:-1:exon
so has part: feature:24191-24326:-1:exon
so has part: feature:23419-23490:-1:exon
so has part: feature:23151-23340:-1:exon
so has part: feature:22615-22755:-1:exon
so has part: feature:21429-22141:-1:exon
so has part: feature:21232-21355:-1:exon
so has part: feature:21016-21153:-1:exon
so has part: feature:20748-20872:-1:exon
so has part: feature:20271-20482:-1:exon
so has part: feature:20002-20080:-1:exon
so has part: feature:19626-19860:-1:exon
so has part: feature:19151-19320:-1:exon
so has part: feature:18847-19058:-1:exon
so has part: feature:18323-18527:-1:exon
so has part: feature:18171-18242:-1:exon
so has part: feature:18053-18073:-1:exon
so has part: feature:17688-17830:-1:exon
so has part: feature:17538-17612:-1:exon
so has part: feature:17329-17392:-1:exon

XP_041568147.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24974-25004:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:24797-24897:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:24407-24474:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:24191-24326:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:23419-23490:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:23151-23340:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:22615-22755:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:21429-22141:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:21232-21355:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:21016-21153:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:20748-20872:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:20271-20482:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:20002-20080:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:19626-19860:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:19151-19320:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:18847-19058:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:18323-18527:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:18171-18242:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:18053-18073:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:17688-17830:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:17538-17612:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:17329-17392:-1:exon

CAMTA2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: CAMTA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calmodulin-binding transcription activator 2 isoform X1
translation: MSSKEPPEVSERSHLKVFLPRKLVECLPKCPVLPKEQLRWNTNEEIASYLITFEKHDEWLSCSPKTRPQNGSVILYNRKKVKYRKDGYCWKKRKDGKTTREDHMKLKVQGVECLYGCYVHSSIVPTFHRRCYWLLQNPDIVLVHYLNVPAMEECGRPCAPRLCSPPLCAGAPPICAAAADPREWLKWSQEELVAQLRPMFHGVKWGCGNGGAAPGLSLEQLVQHVLERHQARPPPRTHACLCAGGLGAPGHKCSSTKHRIISPKVERGGEGDPPKPAPSSPDTTQPSPGLGGGSAPPEGSRAPPFPPAGGLPLLVVASLGGGAAPGGPEQPLGLTPSQHLVTPEGTCPTAPPPPAAFDPDCFLNSPRRGQTYGCEAEAPPGAPPRPPTAAPKLEEDEEEAEEEEEQEGKEAAVPQDPLCELSAAPPPQPPFPLPFPELLVGDTGVPPNLREPPHTPHLPSSPTGPPSDPPVAITDFSPEWSYPEGGVKVLITGPWGDPGAYSCLFDRTSVPAALVQPGVLRCYCPPHEAGVAALRVACPPRLLSAAAPFEYRARGAARGPPGAQLDWLALDEAQFRLSILERLEQLETRLGALPPPAPLPPPRGGPSESPPEQGPGSSFEARVVAICEAMMARPGWSGTSLGTSLGTSGTSVLAHGATFRGMTLLHLAAAQGYAGLVEALRRWRALAVESLELEQEIDPLNVDHFSCTPLMWACALGHREAAERLCRWDRRALAVPDTLGRLPLALARARGHLALVTRLEELQMSPVSPRCHLPGLRIPSPLSASPDTGLSTASSLSSPSGLSEGPGSVPLPPGPPGPCEDDSWGVAVPPSPPEDALTLPSDTLQAEVVTLARQIIEATPERIKQEAPGGPLGALGAAGGTPGTTGTTGPAGLGAAMAWLATYLESVDRPPAPANRAEAASRGSPGVPERPPPPSAAGWAEFLNASGGARGEGGAVALLTLSDQEQHELYEAARLVQGAFRKYRGRRLKEQQELAAAVIQRCYRKYKQLTWIALKFALFQRMTQAAILIQSKFRSYAEQKRFQRRRRAAVLIQQRFRSLRQHRCGRGTRGTRGAGGTGVLTLLSIPPRSTFLTLKQDQAARKIMRFLRRCRHRMEELKQNKEVDSLQTRGLAS
SIO_010081: CAMTA2
subclass of: SO_0000673
so part of: CAMTA2
location: complement(join(17329..17392,17538..17830,18053..18073,18171..18242,18323..18527,18847..19058,19151..19320,19626..19860,20002..20080,20271..20482,20748..20872,21016..21153,21232..21355,21429..22141,22615..22755,23151..23340,23419..23490,24191..24326,24407..24474,24797..24897,24974..25004))
location: region:17329-25004:-1
so has part: feature:24974-25004:-1:exon
so has part: feature:24797-24897:-1:exon
so has part: feature:24407-24474:-1:exon
so has part: feature:24191-24326:-1:exon
so has part: feature:23419-23490:-1:exon
so has part: feature:23151-23340:-1:exon
so has part: feature:22615-22755:-1:exon
so has part: feature:21429-22141:-1:exon
so has part: feature:21232-21355:-1:exon
so has part: feature:21016-21153:-1:exon
so has part: feature:20748-20872:-1:exon
so has part: feature:20271-20482:-1:exon
so has part: feature:20002-20080:-1:exon
so has part: feature:19626-19860:-1:exon
so has part: feature:19151-19320:-1:exon
so has part: feature:18847-19058:-1:exon
so has part: feature:18323-18527:-1:exon
so has part: feature:18171-18242:-1:exon
so has part: feature:18053-18073:-1:exon
so has part: feature:17538-17830:-1:exon
so has part: feature:17329-17392:-1:exon

XP_041568145.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24974-25004:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:24797-24897:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:24407-24474:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:24191-24326:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:23419-23490:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:23151-23340:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:22615-22755:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:21429-22141:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:21232-21355:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:21016-21153:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:20748-20872:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:20271-20482:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:20002-20080:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:19626-19860:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:19151-19320:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:18847-19058:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:18323-18527:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:18171-18242:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:18053-18073:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:17538-17830:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:17329-17392:-1:exon

CAMTA2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: CAMTA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calmodulin-binding transcription activator 2 isoform X5
translation: MKLKVQGVECLYGCYVHSSIVPTFHRRCYWLLQNPDIVLVHYLNVPAMEECGRPCAPRLCSPPLCAGAPPICAAAADPREWLKWSQEELVAQLRPMFHGVKWGCGNGGAAPGLSLEQLVQHVLERHQARPPPRTHACLCAGGLGAPGHKCSSTKHRIISPKVERGGEGDPPKPAPSSPDTTQPSPGLGGGSAPPEGSRAPPFPPAGGLPLLVVASLGGGAAPGGPEQPLGLTPSQHLVTPEGTCPTAPPPPAAFDPDCFLNSPRRGQTYGCEAEAPPGAPPRPPTAAPKLEEDEEEAEEEEEQEGKEAAVPQDPLCELSAAPPPQPPFPLPFPELLVGDTGVPPNLREPPHTPHLPSSPTGPPSDPPVAITDFSPEWSYPEGGVKVLITGPWGDPGAYSCLFDRTSVPAALVQPGVLRCYCPPHEAGVAALRVACPPRLLSAAAPFEYRARGAARGPPGAQLDWLALDEAQFRLSILERLEQLETRLGALPPPAPLPPPRGGPSESPPEQGPGSSFEARVVAICEAMMARPGWSGTSLGTSLGTSGTSVLAHGATFRGMTLLHLAAAQGYAGLVEALRRWRALAVESLELEQEIDPLNVDHFSCTPLMWACALGHREAAERLCRWDRRALAVPDTLGRLPLALARARGHLALVTRLEELQMSPVSPRCHLPGLRIPSPLSASPDTGLSTASSLSSPSGLSEGPGSVPLPPGPPGPCEDDSWGVAVPPSPPEDALTLPSDTLQAEVVTLARQIIEATPERIKQEAPGGPLGALGAAGGTPGTTGTTGPAGLGAAMAWLATYLESVDRPPAPANRAEAASRGSPGVPERPPPPSAAGWAEFLNASGGARGEGGAVALLTLSDQEQHELYEAARLVQGAFRKYRGRRLKEQQELAAAVIQRCYRKYKQLTWIALKFALFQRMTQAAILIQSKFRSYAEQKRFQRRRRAAVLIQQRFRSLRQHRCGRGTRGTRGAGGTGVLTLLSIPPRSTFLTLKQDQAARKIMRFLRRCRHRMEELKQNKEVDSLQTRGLAS
SIO_010081: CAMTA2
subclass of: SO_0000673
so part of: CAMTA2
location: complement(join(17329..17392,17538..17830,18053..18073,18171..18242,18323..18527,18847..19058,19151..19320,19626..19860,20002..20080,20271..20482,20748..20872,21016..21153,21232..21355,21429..22141,22615..22755,23151..23340,23419..23490,24191..24217))
location: region:17329-24217:-1
so has part: feature:24191-24217:-1:exon
so has part: feature:23419-23490:-1:exon
so has part: feature:23151-23340:-1:exon
so has part: feature:22615-22755:-1:exon
so has part: feature:21429-22141:-1:exon
so has part: feature:21232-21355:-1:exon
so has part: feature:21016-21153:-1:exon
so has part: feature:20748-20872:-1:exon
so has part: feature:20271-20482:-1:exon
so has part: feature:20002-20080:-1:exon
so has part: feature:19626-19860:-1:exon
so has part: feature:19151-19320:-1:exon
so has part: feature:18847-19058:-1:exon
so has part: feature:18323-18527:-1:exon
so has part: feature:18171-18242:-1:exon
so has part: feature:18053-18073:-1:exon
so has part: feature:17538-17830:-1:exon
so has part: feature:17329-17392:-1:exon

XP_041568149.1
type: Protein
SIO_000068: ncbiprotein

position:24217:-1
position: 24217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24191-24217:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:23419-23490:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:23151-23340:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:22615-22755:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:21429-22141:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:21232-21355:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:21016-21153:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:20748-20872:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:20271-20482:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:20002-20080:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:19626-19860:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:19151-19320:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:18847-19058:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:18323-18527:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:18171-18242:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:18053-18073:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:17538-17830:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:17329-17392:-1:exon

KIF1C
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: KIF1C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 26743..36263
location: region:26743-36263:1
so has part: feature:26743-36263:1:exon
subclass of: SO_0000010

121468495
type: Gene
SIO_000068: ncbigene

position:26743:1
position: 26743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36263:1
position: 36263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26743-36263:1:exon

KIF1C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: KIF1C
product: kinesin family member 1C
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 43 samples with support for all annotated introns
transcript id: XM_041712181.1
SIO_010081: KIF1C
subclass of: SO_0000673
so part of: KIF1C
location: join(26743..26836,28175..28298,28548..28624,28693..28872,28955..29020,29994..30172,30245..30356,31203..31280,31362..31427,31518..31596,31731..31809,31892..32013,32255..32367,32478..32557,32739..32814,32909..32988,33074..33168,33438..33521,33790..33952,34023..34080,34940..35443,35523..36263)
location: region:26743-36263:1
so has part: feature:26743-26836:1:exon
so has part: feature:28175-28298:1:exon
so has part: feature:28548-28624:1:exon
so has part: feature:28693-28872:1:exon
so has part: feature:28955-29020:1:exon
so has part: feature:29994-30172:1:exon
so has part: feature:30245-30356:1:exon
so has part: feature:31203-31280:1:exon
so has part: feature:31362-31427:1:exon
so has part: feature:31518-31596:1:exon
so has part: feature:31731-31809:1:exon
so has part: feature:31892-32013:1:exon
so has part: feature:32255-32367:1:exon
so has part: feature:32478-32557:1:exon
so has part: feature:32739-32814:1:exon
so has part: feature:32909-32988:1:exon
so has part: feature:33074-33168:1:exon
so has part: feature:33438-33521:1:exon
so has part: feature:33790-33952:1:exon
so has part: feature:34023-34080:1:exon
so has part: feature:34940-35443:1:exon
so has part: feature:35523-36263:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:26743-26836:1:exon

position:26836:1
position: 26836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:28175-28298:1:exon

position:28175:1
position: 28175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28298:1
position: 28298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:28548-28624:1:exon

position:28548:1
position: 28548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28624:1
position: 28624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:28693-28872:1:exon

position:28693:1
position: 28693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28872:1
position: 28872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:28955-29020:1:exon

position:28955:1
position: 28955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29020:1
position: 29020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:29994-30172:1:exon

position:29994:1
position: 29994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30172:1
position: 30172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:30245-30356:1:exon

position:30245:1
position: 30245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30356:1
position: 30356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:31203-31280:1:exon

position:31203:1
position: 31203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31280:1
position: 31280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:31362-31427:1:exon

position:31362:1
position: 31362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31427:1
position: 31427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:31518-31596:1:exon

position:31518:1
position: 31518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31596:1
position: 31596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:31731-31809:1:exon

position:31731:1
position: 31731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31809:1
position: 31809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:31892-32013:1:exon

position:31892:1
position: 31892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32013:1
position: 32013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:32255-32367:1:exon

position:32255:1
position: 32255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32367:1
position: 32367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:32478-32557:1:exon

position:32478:1
position: 32478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32557:1
position: 32557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:32739-32814:1:exon

position:32739:1
position: 32739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32814:1
position: 32814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:32909-32988:1:exon

position:32909:1
position: 32909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32988:1
position: 32988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:33074-33168:1:exon

position:33074:1
position: 33074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33168:1
position: 33168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:33438-33521:1:exon

position:33438:1
position: 33438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33521:1
position: 33521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:33790-33952:1:exon

position:33790:1
position: 33790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33952:1
position: 33952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:34023-34080:1:exon

position:34023:1
position: 34023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34080:1
position: 34080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:34940-35443:1:exon

position:34940:1
position: 34940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35443:1
position: 35443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:35523-36263:1:exon

position:35523:1
position: 35523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

KIF1C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: KIF1C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kinesin-like protein KIF1C
translation: MAGASVKVAVRVRPFSARESSRQAKCVIQMRGNTTCITNPKLPKEATKHFTFDYSYWSHTSEEDPNFASQRRVYQDIGEEMLAHAFEGYNVCILAYGQTGAGKSYTMMGRQEPGQRGIIPQLCEDLFARVAREGSPELSFSVEVSYLEIYCERVRDLLNPKSRGGLRVREHPLLGPYVQDLSRLAVASFADIADLMDSGNKARTVAATNMNETSSRSHAVFTIVFSQRRQDPLSDLTTEKVSRISLVDLAGSERADASGAKGIRLKEGANINKSLTTLGKVISALAEAQSSKKKKADFIPYRDSVLTWLLKENLGGNSRTAMIAALSPADSSYEETLSTLRYADRTKQIRCHAVINEDPNARLIRELRAEVTRLRELLSAQGLSDTPVSGPAATTSPTLNGDPGLEPPLGPTEAMERLQETEKIIAELNETWEEKLRRTEALRLEREALLAEMGVALREDGGTVGVFSPKKTPHLVNLNEDPLMSECLLYHIKDGVTRVGQVDVDIKLSGPFIREQHCLFRSRADPSGEVVVTLEPCEGAETYVNGKQVTEPVVLKSGHRLILGKNHVFRFTHPEQARRERERGASPGPPPDWNLAQRELLEQQGIDMRLQRLQELENQPHPEKEVSERPQPEDPPCYEAGWRLISSLRQALPAPAVRSVLRRAGLPLPAPGKRREPLRVYQIPQRRRGSPTPSPSPSPTSWVSMADLKAQAVRELCRRHGKHDPADPDSGRDVRDVRDAGEDEEGGGQVSEVEGLRLHLDRLAGILREVKRQNSAKDEQIRALRDRVGQMERVIPLPPDDGDEAEPPHQDPPPARTDGGSGSAPPSPPSAAAARLCRLMEQDPAFRRGRLRWLRQEQARLMGGGPQALQPPRRPPRFHPAPQDSKLRFPFKSNPQHRLAWGSGGDPPHADNSPPTPAHPSGRPRRGSLDGGSPPPAVGASPPRVRRQRSAPDLKAQGPIP
SIO_010081: KIF1C
subclass of: SO_0000673
so part of: KIF1C
location: join(28193..28298,28548..28624,28693..28872,28955..29020,29994..30172,30245..30356,31203..31280,31362..31427,31518..31596,31731..31809,31892..32013,32255..32367,32478..32557,32739..32814,32909..32988,33074..33168,33438..33521,33790..33952,34023..34080,34940..35443,35523..36011)
location: region:28193-36011:1
so has part: feature:28193-28298:1:exon
so has part: feature:28548-28624:1:exon
so has part: feature:28693-28872:1:exon
so has part: feature:28955-29020:1:exon
so has part: feature:29994-30172:1:exon
so has part: feature:30245-30356:1:exon
so has part: feature:31203-31280:1:exon
so has part: feature:31362-31427:1:exon
so has part: feature:31518-31596:1:exon
so has part: feature:31731-31809:1:exon
so has part: feature:31892-32013:1:exon
so has part: feature:32255-32367:1:exon
so has part: feature:32478-32557:1:exon
so has part: feature:32739-32814:1:exon
so has part: feature:32909-32988:1:exon
so has part: feature:33074-33168:1:exon
so has part: feature:33438-33521:1:exon
so has part: feature:33790-33952:1:exon
so has part: feature:34023-34080:1:exon
so has part: feature:34940-35443:1:exon
so has part: feature:35523-36011:1:exon

XP_041568115.1
type: Protein
SIO_000068: ncbiprotein

position:28193:1
position: 28193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36011:1
position: 36011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28193-28298:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:28548-28624:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:28693-28872:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:28955-29020:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:29994-30172:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:30245-30356:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:31203-31280:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:31362-31427:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:31518-31596:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:31731-31809:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:31892-32013:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:32255-32367:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:32478-32557:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:32739-32814:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:32909-32988:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:33074-33168:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:33438-33521:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:33790-33952:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:34023-34080:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:34940-35443:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:35523-36011:1:exon

PCOLCE
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: PCOLCE
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 36463..42232
location: region:36463-42232:1
so has part: feature:36463-42232:1:exon
subclass of: SO_0000010

121468496
type: Gene
SIO_000068: ncbigene

position:36463:1
position: 36463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42232:1
position: 42232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36463-42232:1:exon

PCOLCE
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: PCOLCE
product: procollagen C-endopeptidase enhancer
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 66 samples with support for all annotated introns
transcript id: XM_041712187.1
SIO_010081: PCOLCE
subclass of: SO_0000673
so part of: PCOLCE
location: join(36463..36665,37179..37296,37856..38114,39400..39524,40199..40335,41369..41613,41762..41935,42018..42232)
location: region:36463-42232:1
so has part: feature:36463-36665:1:exon
so has part: feature:37179-37296:1:exon
so has part: feature:37856-38114:1:exon
so has part: feature:39400-39524:1:exon
so has part: feature:40199-40335:1:exon
so has part: feature:41369-41613:1:exon
so has part: feature:41762-41935:1:exon
so has part: feature:42018-42232:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:36463-36665:1:exon

position:36665:1
position: 36665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:37179-37296:1:exon

position:37179:1
position: 37179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37296:1
position: 37296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:37856-38114:1:exon

position:37856:1
position: 37856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38114:1
position: 38114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:39400-39524:1:exon

position:39400:1
position: 39400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39524:1
position: 39524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:40199-40335:1:exon

position:40199:1
position: 40199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40335:1
position: 40335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:41369-41613:1:exon

position:41369:1
position: 41369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41613:1
position: 41613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:41762-41935:1:exon

position:41762:1
position: 41762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41935:1
position: 41935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:42018-42232:1:exon

position:42018:1
position: 42018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PCOLCE
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: PCOLCE
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: procollagen C-endopeptidase enhancer 1
translation: MSRLGPPLPLLLLGALGVLTPNPTAGQDPAPSPPPSPRPNASRPVFPVFPCGGDHRGESGFIASEGFPRHYPPGSNCTWTITVPEGQVATLSFRVFDLEPDPLCRFDALSVFGGHGPGAPLLGRFCGTFRPGALRAPQNRLRLHMESDGGTAGRGFLAWFSAGSPPSNEHQFCGGRLEKPQGSLSTPNWPEENYPPGISCSWHIVAPPDKVVELRFGKFDVEPDPHCRYDYVAVFEGGARDDARRLGRFCGEETPGPIVSRSPELLVQFVSDLSVTADGFSATYTLREGGSAPETPTHKPRAGGKGQPPPSPATAAPCPQRCRRTGTLQSNFCSSDFVLTGTVKSVSRGSPQEPGWAVVSVLALYKSGVPGVPGAAKGSALRLQLPCRPCPVLKKGSSYVLMGRLGADGGALLPPDAFVVPYRPQQQQLLGNLSKRPCRGSPP
SIO_010081: PCOLCE
subclass of: SO_0000673
so part of: PCOLCE
location: join(36538..36665,37179..37296,37856..38114,39400..39524,40199..40335,41369..41613,41762..41935,42018..42163)
location: region:36538-42163:1
so has part: feature:36538-36665:1:exon
so has part: feature:37179-37296:1:exon
so has part: feature:37856-38114:1:exon
so has part: feature:39400-39524:1:exon
so has part: feature:40199-40335:1:exon
so has part: feature:41369-41613:1:exon
so has part: feature:41762-41935:1:exon
so has part: feature:42018-42163:1:exon

XP_041568121.1
type: Protein
SIO_000068: ncbiprotein

position:36538:1
position: 36538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42163:1
position: 42163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36538-36665:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:37179-37296:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:37856-38114:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:39400-39524:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:40199-40335:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:41369-41613:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:41762-41935:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:42018-42163:1:exon

LOC115492698
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC115492698
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 42820..48246
location: region:42820-48246:1
so has part: feature:42820-48246:1:exon
subclass of: SO_0000010

115492698
type: Gene
SIO_000068: ncbigene

position:42820:1
position: 42820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48246:1
position: 48246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42820-48246:1:exon

LOC115492698
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC115492698
product: leucine-rich repeat and calponin homology domain-containing protein 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_041712183.1
SIO_010081: LOC115492698
subclass of: SO_0000673
so part of: LOC115492698
location: join(42820..43051,43426..43570,43646..43772,43846..43951,44032..44168,44237..44310,44395..44491,44579..44636,44806..44959,46094..46139,46244..46331,46567..46805,47590..47652,47741..48246)
location: region:42820-48246:1
so has part: feature:42820-43051:1:exon
so has part: feature:43426-43570:1:exon
so has part: feature:43646-43772:1:exon
so has part: feature:43846-43951:1:exon
so has part: feature:44032-44168:1:exon
so has part: feature:44237-44310:1:exon
so has part: feature:44395-44491:1:exon
so has part: feature:44579-44636:1:exon
so has part: feature:44806-44959:1:exon
so has part: feature:46094-46139:1:exon
so has part: feature:46244-46331:1:exon
so has part: feature:46567-46805:1:exon
so has part: feature:47590-47652:1:exon
so has part: feature:47741-48246:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:42820-43051:1:exon

position:43051:1
position: 43051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:43426-43570:1:exon

position:43426:1
position: 43426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43570:1
position: 43570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:43646-43772:1:exon

position:43646:1
position: 43646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43772:1
position: 43772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:43846-43951:1:exon

position:43846:1
position: 43846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43951:1
position: 43951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:44032-44168:1:exon

position:44032:1
position: 44032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44168:1
position: 44168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:44237-44310:1:exon

position:44237:1
position: 44237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44310:1
position: 44310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:44395-44491:1:exon

position:44395:1
position: 44395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44491:1
position: 44491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:44579-44636:1:exon

position:44579:1
position: 44579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44636:1
position: 44636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:44806-44959:1:exon

position:44806:1
position: 44806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44959:1
position: 44959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:46094-46139:1:exon

position:46094:1
position: 46094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46139:1
position: 46139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:46244-46331:1:exon

position:46244:1
position: 46244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46331:1
position: 46331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:46567-46805:1:exon

position:46567:1
position: 46567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46805:1
position: 46805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:47590-47652:1:exon

position:47590:1
position: 47590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47652:1
position: 47652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:47741-48246:1:exon

position:47741:1
position: 47741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115492698
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC115492698
product: leucine-rich repeat and calponin homology domain-containing protein 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 75 samples with support for all annotated introns
transcript id: XM_041712182.1
SIO_010081: LOC115492698
subclass of: SO_0000673
so part of: LOC115492698
location: join(42821..43051,43426..43570,43646..43772,43846..43951,44032..44168,44237..44310,44395..44491,44579..44636,44806..44959,45028..45105,46094..46139,46244..46331,46567..46805,47590..47652,47741..48246)
location: region:42821-48246:1
so has part: feature:42821-43051:1:exon
so has part: feature:43426-43570:1:exon
so has part: feature:43646-43772:1:exon
so has part: feature:43846-43951:1:exon
so has part: feature:44032-44168:1:exon
so has part: feature:44237-44310:1:exon
so has part: feature:44395-44491:1:exon
so has part: feature:44579-44636:1:exon
so has part: feature:44806-44959:1:exon
so has part: feature:45028-45105:1:exon
so has part: feature:46094-46139:1:exon
so has part: feature:46244-46331:1:exon
so has part: feature:46567-46805:1:exon
so has part: feature:47590-47652:1:exon
so has part: feature:47741-48246:1:exon

position:42821:1
position: 42821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42821-43051:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:43426-43570:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:43646-43772:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:43846-43951:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:44032-44168:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:44237-44310:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:44395-44491:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:44579-44636:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:44806-44959:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:45028-45105:1:exon

position:45028:1
position: 45028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45105:1
position: 45105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:46094-46139:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:46244-46331:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:46567-46805:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:47590-47652:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:47741-48246:1:exon

LOC115492698
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC115492698
product: leucine-rich repeat and calponin homology domain-containing protein 4, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_041712185.1
SIO_010081: LOC115492698
subclass of: SO_0000673
so part of: LOC115492698
location: join(42823..43051,43426..43570,43646..43772,43846..43951,44032..44168,44237..44310,44395..44491,44579..44636,44806..44959,45028..45105,46094..46139,46244..46331,46567..46598,46713..46805,47590..47652,47741..48246)
location: region:42823-48246:1
so has part: feature:42823-43051:1:exon
so has part: feature:43426-43570:1:exon
so has part: feature:43646-43772:1:exon
so has part: feature:43846-43951:1:exon
so has part: feature:44032-44168:1:exon
so has part: feature:44237-44310:1:exon
so has part: feature:44395-44491:1:exon
so has part: feature:44579-44636:1:exon
so has part: feature:44806-44959:1:exon
so has part: feature:45028-45105:1:exon
so has part: feature:46094-46139:1:exon
so has part: feature:46244-46331:1:exon
so has part: feature:46567-46598:1:exon
so has part: feature:46713-46805:1:exon
so has part: feature:47590-47652:1:exon
so has part: feature:47741-48246:1:exon

position:42823:1
position: 42823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42823-43051:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:43426-43570:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:43646-43772:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:43846-43951:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:44032-44168:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:44237-44310:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:44395-44491:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:44579-44636:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:44806-44959:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:45028-45105:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:46094-46139:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:46244-46331:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:46567-46598:1:exon

position:46598:1
position: 46598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:46713-46805:1:exon

position:46713:1
position: 46713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:47590-47652:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:47741-48246:1:exon

LOC115492698
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC115492698
product: leucine-rich repeat and calponin homology domain-containing protein 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 71 samples with support for all annotated introns
transcript id: XM_041712184.1
SIO_010081: LOC115492698
subclass of: SO_0000673
so part of: LOC115492698
location: join(42825..43051,43426..43570,43646..43772,43846..43951,44032..44168,44237..44310,44395..44491,44579..44636,44806..44959,45028..45105,46094..46139,46244..46331,46567..46607,46713..46805,47590..47652,47741..48246)
location: region:42825-48246:1
so has part: feature:42825-43051:1:exon
so has part: feature:43426-43570:1:exon
so has part: feature:43646-43772:1:exon
so has part: feature:43846-43951:1:exon
so has part: feature:44032-44168:1:exon
so has part: feature:44237-44310:1:exon
so has part: feature:44395-44491:1:exon
so has part: feature:44579-44636:1:exon
so has part: feature:44806-44959:1:exon
so has part: feature:45028-45105:1:exon
so has part: feature:46094-46139:1:exon
so has part: feature:46244-46331:1:exon
so has part: feature:46567-46607:1:exon
so has part: feature:46713-46805:1:exon
so has part: feature:47590-47652:1:exon
so has part: feature:47741-48246:1:exon

position:42825:1
position: 42825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42825-43051:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:43426-43570:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:43646-43772:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:43846-43951:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:44032-44168:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:44237-44310:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:44395-44491:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:44579-44636:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:44806-44959:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:45028-45105:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:46094-46139:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:46244-46331:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:46567-46607:1:exon

position:46607:1
position: 46607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:46713-46805:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:47590-47652:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:47741-48246:1:exon

LOC115492698
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC115492698
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat and calponin homology domain-containing protein 4 isoform X1
translation: MAAGAAGAVPAEPPPPLGRLPGGAGTERALEEAEASGTLSLAGRRLRAFPAAAARRWDLSDTTQADLSRNRFAEVPEAACRLVSLEALSLHHNCLRSVPPAIANLHSLAHLDLSRNQLSSLPACLCLLPLRVLNASNNRLARLPPNLGTLRTLRQLDVGGNRLRALPPGLGQLRALRDLSVRRNELAVLPDELSELPLVRLDFSCNRVVAIPRCFRRLRHLQVLLADNNPLQFPPAQICLKGKVHIFKYLEAEAAAHHPPACPPDELCPLRQRGGLDSGFHSVDSGSKRWSGNESTDESSEPSRQHRETRGGAAADSDPEQLEEEPSPEVMPKFWGSPPNPGPPSVPQEQQQGQSPRGDTPEGTRVVPAPRRRPQNLEVWMERERERSRDRTPPQRRPQTSTPLLLDPDGAPGPPCSPPEPRACLTPCSSSSSKPAPPDPDQLIAEVRQVTPVLSPPCGFWGVLGSVPPLTRSGGSPLCPPTPQSLEALLQLRLPEDFGDSELLRRVAARLRPWASPPSARRTPPSPPRHRSGVPEVKPPHPRRPPPGLLFALFYGLLMALLVAAHRALFGC
SIO_010081: LOC115492698
subclass of: SO_0000673
so part of: LOC115492698
location: join(42856..43051,43426..43570,43646..43772,43846..43951,44032..44168,44237..44310,44395..44491,44579..44636,44806..44959,45028..45105,46094..46139,46244..46331,46567..46805,47590..47652,47741..47851)
location: region:42856-47851:1
so has part: feature:42856-43051:1:exon
so has part: feature:43426-43570:1:exon
so has part: feature:43646-43772:1:exon
so has part: feature:43846-43951:1:exon
so has part: feature:44032-44168:1:exon
so has part: feature:44237-44310:1:exon
so has part: feature:44395-44491:1:exon
so has part: feature:44579-44636:1:exon
so has part: feature:44806-44959:1:exon
so has part: feature:45028-45105:1:exon
so has part: feature:46094-46139:1:exon
so has part: feature:46244-46331:1:exon
so has part: feature:46567-46805:1:exon
so has part: feature:47590-47652:1:exon
so has part: feature:47741-47851:1:exon

XP_041568116.1
type: Protein
SIO_000068: ncbiprotein

position:42856:1
position: 42856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47851:1
position: 47851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42856-43051:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:43426-43570:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:43646-43772:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:43846-43951:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:44032-44168:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:44237-44310:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:44395-44491:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:44579-44636:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:44806-44959:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:45028-45105:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:46094-46139:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:46244-46331:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:46567-46805:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:47590-47652:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:47741-47851:1:exon

LOC115492698
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC115492698
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat and calponin homology domain-containing protein 4 isoform X3
translation: MAAGAAGAVPAEPPPPLGRLPGGAGTERALEEAEASGTLSLAGRRLRAFPAAAARRWDLSDTTQADLSRNRFAEVPEAACRLVSLEALSLHHNCLRSVPPAIANLHSLAHLDLSRNQLSSLPACLCLLPLRVLNASNNRLARLPPNLGTLRTLRQLDVGGNRLRALPPGLGQLRALRDLSVRRNELAVLPDELSELPLVRLDFSCNRVVAIPRCFRRLRHLQVLLADNNPLQFPPAQICLKGKVHIFKYLEAEAAAHHPPACPPDELCPLRQRGGLDSGFHSVDSGSKRWSGNESTDESSEPSRQHRETRGGAAADSDPEQLEEEPSPEVMPKFWGSPPNPGPPSVPQEQQQGQSPRGDTPEGTRVVPAPRRRPQNLEVWMERERERSRDRTPPQRRPQTSTPLLLDPDGAPGPPCSPPEPRACLTPCSSSSSKPAPPDPDQLIAEVRQSLEALLQLRLPEDFGDSELLRRVAARLRPWASPPSARRTPPSPPRHRSGVPEVKPPHPRRPPPGLLFALFYGLLMALLVAAHRALFGC
SIO_010081: LOC115492698
subclass of: SO_0000673
so part of: LOC115492698
location: join(42856..43051,43426..43570,43646..43772,43846..43951,44032..44168,44237..44310,44395..44491,44579..44636,44806..44959,45028..45105,46094..46139,46244..46331,46567..46607,46713..46805,47590..47652,47741..47851)
location: region:42856-47851:1
so has part: feature:42856-43051:1:exon
so has part: feature:43426-43570:1:exon
so has part: feature:43646-43772:1:exon
so has part: feature:43846-43951:1:exon
so has part: feature:44032-44168:1:exon
so has part: feature:44237-44310:1:exon
so has part: feature:44395-44491:1:exon
so has part: feature:44579-44636:1:exon
so has part: feature:44806-44959:1:exon
so has part: feature:45028-45105:1:exon
so has part: feature:46094-46139:1:exon
so has part: feature:46244-46331:1:exon
so has part: feature:46567-46607:1:exon
so has part: feature:46713-46805:1:exon
so has part: feature:47590-47652:1:exon
so has part: feature:47741-47851:1:exon

XP_041568118.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42856-43051:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:43426-43570:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:43646-43772:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:43846-43951:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:44032-44168:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:44237-44310:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:44395-44491:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:44579-44636:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:44806-44959:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:45028-45105:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:46094-46139:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:46244-46331:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:46567-46607:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:46713-46805:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:47590-47652:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:47741-47851:1:exon

LOC115492698
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC115492698
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat and calponin homology domain-containing protein 4 isoform X4
translation: MAAGAAGAVPAEPPPPLGRLPGGAGTERALEEAEASGTLSLAGRRLRAFPAAAARRWDLSDTTQADLSRNRFAEVPEAACRLVSLEALSLHHNCLRSVPPAIANLHSLAHLDLSRNQLSSLPACLCLLPLRVLNASNNRLARLPPNLGTLRTLRQLDVGGNRLRALPPGLGQLRALRDLSVRRNELAVLPDELSELPLVRLDFSCNRVVAIPRCFRRLRHLQVLLADNNPLQFPPAQICLKGKVHIFKYLEAEAAAHHPPACPPDELCPLRQRGGLDSGFHSVDSGSKRWSGNESTDESSEPSRQHRETRGGAAADSDPEQLEEEPSPEVMPKFWGSPPNPGPPSVPQEQQQGQSPRGDTPEGTRVVPAPRRRPQNLEVWMERERERSRDRTPPQRRPQTSTPLLLDPDGAPGPPCSPPEPRACLTPCSSSSSKPAPPDPDQLIAESLEALLQLRLPEDFGDSELLRRVAARLRPWASPPSARRTPPSPPRHRSGVPEVKPPHPRRPPPGLLFALFYGLLMALLVAAHRALFGC
SIO_010081: LOC115492698
subclass of: SO_0000673
so part of: LOC115492698
location: join(42856..43051,43426..43570,43646..43772,43846..43951,44032..44168,44237..44310,44395..44491,44579..44636,44806..44959,45028..45105,46094..46139,46244..46331,46567..46598,46713..46805,47590..47652,47741..47851)
location: region:42856-47851:1
so has part: feature:42856-43051:1:exon
so has part: feature:43426-43570:1:exon
so has part: feature:43646-43772:1:exon
so has part: feature:43846-43951:1:exon
so has part: feature:44032-44168:1:exon
so has part: feature:44237-44310:1:exon
so has part: feature:44395-44491:1:exon
so has part: feature:44579-44636:1:exon
so has part: feature:44806-44959:1:exon
so has part: feature:45028-45105:1:exon
so has part: feature:46094-46139:1:exon
so has part: feature:46244-46331:1:exon
so has part: feature:46567-46598:1:exon
so has part: feature:46713-46805:1:exon
so has part: feature:47590-47652:1:exon
so has part: feature:47741-47851:1:exon

XP_041568119.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42856-43051:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:43426-43570:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:43646-43772:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:43846-43951:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:44032-44168:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:44237-44310:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:44395-44491:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:44579-44636:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:44806-44959:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:45028-45105:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:46094-46139:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:46244-46331:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:46567-46598:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:46713-46805:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:47590-47652:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:47741-47851:1:exon

LOC115492698
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC115492698
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat and calponin homology domain-containing protein 4 isoform X2
translation: MAAGAAGAVPAEPPPPLGRLPGGAGTERALEEAEASGTLSLAGRRLRAFPAAAARRWDLSDTTQADLSRNRFAEVPEAACRLVSLEALSLHHNCLRSVPPAIANLHSLAHLDLSRNQLSSLPACLCLLPLRVLNASNNRLARLPPNLGTLRTLRQLDVGGNRLRALPPGLGQLRALRDLSVRRNELAVLPDELSELPLVRLDFSCNRVVAIPRCFRRLRHLQVLLADNNPLQFPPAQICLKGKVHIFKYLEAEAAAHHPPACPPDELCPLRQRGGLDSGFHSVDSGSKRWSGNESTDESSEPSRQHRETRGGAAADSDPEQLEEEPSPEVMPKFWGSPPNPGPPSVPQEQQQGQSPRGDTPEGTRTPPQRRPQTSTPLLLDPDGAPGPPCSPPEPRACLTPCSSSSSKPAPPDPDQLIAEVRQVTPVLSPPCGFWGVLGSVPPLTRSGGSPLCPPTPQSLEALLQLRLPEDFGDSELLRRVAARLRPWASPPSARRTPPSPPRHRSGVPEVKPPHPRRPPPGLLFALFYGLLMALLVAAHRALFGC
SIO_010081: LOC115492698
subclass of: SO_0000673
so part of: LOC115492698
location: join(42856..43051,43426..43570,43646..43772,43846..43951,44032..44168,44237..44310,44395..44491,44579..44636,44806..44959,46094..46139,46244..46331,46567..46805,47590..47652,47741..47851)
location: region:42856-47851:1
so has part: feature:42856-43051:1:exon
so has part: feature:43426-43570:1:exon
so has part: feature:43646-43772:1:exon
so has part: feature:43846-43951:1:exon
so has part: feature:44032-44168:1:exon
so has part: feature:44237-44310:1:exon
so has part: feature:44395-44491:1:exon
so has part: feature:44579-44636:1:exon
so has part: feature:44806-44959:1:exon
so has part: feature:46094-46139:1:exon
so has part: feature:46244-46331:1:exon
so has part: feature:46567-46805:1:exon
so has part: feature:47590-47652:1:exon
so has part: feature:47741-47851:1:exon

XP_041568117.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42856-43051:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:43426-43570:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:43646-43772:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:43846-43951:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:44032-44168:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:44237-44310:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:44395-44491:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:44579-44636:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:44806-44959:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:46094-46139:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:46244-46331:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:46567-46805:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:47590-47652:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:47741-47851:1:exon

NYAP1
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: NYAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(50146..56248)
location: region:50146-56248:-1
so has part: feature:50146-56248:-1:exon
subclass of: SO_0000010

115492699
type: Gene
SIO_000068: ncbigene

position:50146:-1
position: 50146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:56248:-1
position: 56248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50146-56248:-1:exon

NYAP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: NYAP1
product: neuronal tyrosine phosphorylated phosphoinositide-3-kinase adaptor 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_032745371.2
SIO_010081: NYAP1
subclass of: SO_0000673
so part of: NYAP1
location: complement(join(50146..51133,51496..51636,51721..52602,52758..52993,53987..54137,55917..56056,56155..56248))
location: region:50146-56248:-1
so has part: feature:56155-56248:-1:exon
so has part: feature:55917-56056:-1:exon
so has part: feature:53987-54137:-1:exon
so has part: feature:52758-52993:-1:exon
so has part: feature:51721-52602:-1:exon
so has part: feature:51496-51636:-1:exon
so has part: feature:50146-51133:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:56155-56248:-1:exon

position:56155:-1
position: 56155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:55917-56056:-1:exon

position:55917:-1
position: 55917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:56056:-1
position: 56056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:53987-54137:-1:exon

position:53987:-1
position: 53987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54137:-1
position: 54137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:52758-52993:-1:exon

position:52758:-1
position: 52758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:52993:-1
position: 52993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:51721-52602:-1:exon

position:51721:-1
position: 51721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:52602:-1
position: 52602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:51496-51636:-1:exon

position:51496:-1
position: 51496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51636:-1
position: 51636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:50146-51133:-1:exon

position:51133:-1
position: 51133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NYAP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: NYAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adapter 1
translation: MSAPPRSELAAAAAALLRLGEERPPAAAMSLLQRKGRPEWRPREEEPRKGVPKAREGGSLRRPLRVGFLTLPAPQERGPRPCAPGMAPRSLSCHAVGLPEPGVPLRPPGPRSGPPEGRGLEAPPAKRGGTPRGGCVRQTPPLKPSRSPQTRLSSGAPPPALAEQGEAEEPVYIEMVGDARGVPGGDPRRGGPAGAPPAPTEEPEAIYEEMSCPLPAGEGPGHAPFHGHAPFHGHAPFHGHAPSHGHAPSHGHAPFHGHAPLGGPAPHSGHAPFSGHAPHAGRAPFIGHAPFSGPAPIPPPFPNLLPPRPPPLAPPPEAASRLPLPSRREAPPPARARSHSTPLPPHHAPGGAGGRERGGGAGLGPLPLPPPAEAPPPGKRPPAYESVRGGVAAAGPALGREEDTPLRRGGGGASARRGKETEKAPEPPREERAAAAPPPSGIPVRAEGPRGRPGPALPCQTFPACGRASELPGGPRLGRSASTSGVRQAGAPPFPRGPPTSRPLSGGVPGGGFPAAAAAPRARDGQLQEVIDRKRCVCTEIKARGGRGGGLCKQDSLPPLPAPPAWKGGAAPEGRPPPPPPPGTPPARRPHAVLWDTAI
SIO_010081: NYAP1
subclass of: SO_0000673
so part of: NYAP1
location: complement(join(50742..51133,51496..51636,51721..52602,52758..52993,53987..54135))
location: region:50742-54135:-1
so has part: feature:53987-54135:-1:exon
so has part: feature:52758-52993:-1:exon
so has part: feature:51721-52602:-1:exon
so has part: feature:51496-51636:-1:exon
so has part: feature:50742-51133:-1:exon

XP_032601262.2
type: Protein
SIO_000068: ncbiprotein

position:50742:-1
position: 50742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54135:-1
position: 54135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53987-54135:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:52758-52993:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:51721-52602:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:51496-51636:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:50742-51133:-1:exon

LOC121468481
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121468481
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 56319..58542
location: region:56319-58542:1
so has part: feature:56319-58542:1:exon
subclass of: SO_0000010

121468481
type: Gene
SIO_000068: ncbigene

position:56319:1
position: 56319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:58542:1
position: 58542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56319-58542:1:exon

LOC121468481
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC121468481
product: TSC22 domain family protein 4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 138 samples with support for all annotated introns
transcript id: XM_041712159.1
SIO_010081: LOC121468481
subclass of: SO_0000673
so part of: LOC121468481
location: join(56319..56840,56922..57016,57249..57297,58208..58542)
location: region:56319-58542:1
so has part: feature:56319-56840:1:exon
so has part: feature:56922-57016:1:exon
so has part: feature:57249-57297:1:exon
so has part: feature:58208-58542:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:56319-56840:1:exon

position:56840:1
position: 56840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:56922-57016:1:exon

position:56922:1
position: 56922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:57016:1
position: 57016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:57249-57297:1:exon

position:57249:1
position: 57249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:57297:1
position: 57297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:58208-58542:1:exon

position:58208:1
position: 58208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121468481
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC121468481
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TSC22 domain family protein 4-like
translation: MGRGLGRGAATPLKRNITSGSHFRVLPPPPPPPPPVTAPGRPRHVPPPPPPPAAAAPMSRKKSGFAITSVRGGGTAPGDASGAATGSSSSSTGSPGSGSRFRLVRLLWPGEVLRRGRWLCRDFYERDASPRGGGGGGGGGGGGGRVPVSLDAPRAAPAAHQPRSLGAFAELVQQALPPKPPSPRPGGGAELSARLGLAGEEEEEEGAGSGVSAIDNKIERAMDLVKSHLLLAVREEVEALREQIRELSERRAALERENRLLRALATPQQLSRLPALPPPGPPPGPP
SIO_010081: LOC121468481
subclass of: SO_0000673
so part of: LOC121468481
location: join(56319..56840,56922..57016,57249..57297,58208..58402)
location: region:56319-58402:1
so has part: feature:56319-56840:1:exon
so has part: feature:56922-57016:1:exon
so has part: feature:57249-57297:1:exon
so has part: feature:58208-58402:1:exon

XP_041568093.1
type: Protein
SIO_000068: ncbiprotein

position:58402:1
position: 58402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56319-56840:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:56922-57016:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:57249-57297:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:58208-58402:1:exon

LOC115492733
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC115492733
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 58692..60683
location: region:58692-60683:1
so has part: feature:58692-60683:1:exon
subclass of: SO_0000010

115492733
type: Gene
SIO_000068: ncbigene

position:58692:1
position: 58692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:60683:1
position: 60683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58692-60683:1:exon

LOC115492733
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC115492733
product: basic proline-rich protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 45 samples with support for all annotated introns
transcript id: XM_041712190.1
SIO_010081: LOC115492733
subclass of: SO_0000673
so part of: LOC115492733
location: join(58692..58830,59038..59251,59423..59532,60437..60683)
location: region:58692-60683:1
so has part: feature:58692-58830:1:exon
so has part: feature:59038-59251:1:exon
so has part: feature:59423-59532:1:exon
so has part: feature:60437-60683:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:58692-58830:1:exon

position:58830:1
position: 58830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:59038-59251:1:exon

position:59038:1
position: 59038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:59251:1
position: 59251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:59423-59532:1:exon

position:59423:1
position: 59423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:59532:1
position: 59532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:60437-60683:1:exon

position:60437:1
position: 60437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115492733
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC115492733
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: basic proline-rich protein
translation: MRPRALPPPPPPPPGGILRRGGRGGGNRQVRFAVQDEEEEEEEDEGAAAPPALATPTVHSSGRGAPGAAPPEPFDAPRAAAALLRCSFAARSALGGAAAAAMNVPPARRLFRGLVSLAVPPPQPGPRRGGAVSPPPQGPGPSLAALSGTPGTPGTPARAVGWPWPPPPAPPAPPRAVPRPPPTAFTMYRKLQQWGGR
SIO_010081: LOC115492733
subclass of: SO_0000673
so part of: LOC115492733
location: join(58744..58830,59038..59251,59423..59532,60437..60619)
location: region:58744-60619:1
so has part: feature:58744-58830:1:exon
so has part: feature:59038-59251:1:exon
so has part: feature:59423-59532:1:exon
so has part: feature:60437-60619:1:exon

XP_041568124.1
type: Protein
SIO_000068: ncbiprotein

position:58744:1
position: 58744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:60619:1
position: 60619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58744-58830:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:59038-59251:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:59423-59532:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:60437-60619:1:exon

MEPCE
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: MEPCE
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(60726..66713)
location: region:60726-66713:-1
so has part: feature:60726-66713:-1:exon
subclass of: SO_0000010

101233405
type: Gene
SIO_000068: ncbigene

position:60726:-1
position: 60726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:66713:-1
position: 66713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60726-66713:-1:exon

MEPCE
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: MEPCE
product: methylphosphate capping enzyme
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 140 samples with support for all annotated introns
transcript id: XM_041712186.1
SIO_010081: MEPCE
subclass of: SO_0000673
so part of: MEPCE
location: complement(join(60726..60999,62616..62742,63876..64094,65540..66713))
location: region:60726-66713:-1
so has part: feature:65540-66713:-1:exon
so has part: feature:63876-64094:-1:exon
so has part: feature:62616-62742:-1:exon
so has part: feature:60726-60999:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:65540-66713:-1:exon

position:65540:-1
position: 65540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:63876-64094:-1:exon

position:63876:-1
position: 63876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64094:-1
position: 64094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:62616-62742:-1:exon

position:62616:-1
position: 62616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:62742:-1
position: 62742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:60726-60999:-1:exon

position:60999:-1
position: 60999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MEPCE
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: MEPCE
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 7SK snRNA methylphosphate capping enzyme
translation: MRGGGAAQRAGAGRAAMAAAPEAFLVPPPPPPPPPPPAPPAAAAPEPPRPRNGLRTAGGSGKRRSSCGAKQPAWKRRRRAASECGPVLPSEFLLGGNIFDPLNLNSLLDEEVSRALNARTPQSSPLPQRGRDPVEILVPRDITDPLSLNAPGDALRLASPAKSARRRHRHRGQQRNHAASSTAGTGSEEPGRPAEPAAPPCPAGRHRKRRRTCSKSDPPRPSEKPKPGGKAPQRPRRQARKFQYGNYCKYYGYRNPDVEDARLRALRPEWFAGKEVLDVGCNVGHLTLSIAKRWAPARVVGLDIDGRLIRSARQNIRHYLSEGLGADGEPTAGLRKGFPAALLASRGPIAAPQLPPDGPGAADFPHNVVFVTGNYVPEREEAVGAQRPEFDVVLLLSLTKWVQLNWGDEGLKRLFRRAFRHLRPGGILLLEPQPWESYRKRKGLTETTFRNYQRIRLRPEQFPAYLTSPEVGFERCELLGTPQHSAKGFQRPIYLFQKGQSDAP
SIO_010081: MEPCE
subclass of: SO_0000673
so part of: MEPCE
location: complement(join(60947..60999,62616..62742,63876..64094,65540..66655))
location: region:60947-66655:-1
so has part: feature:65540-66655:-1:exon
so has part: feature:63876-64094:-1:exon
so has part: feature:62616-62742:-1:exon
so has part: feature:60947-60999:-1:exon

XP_041568120.1
type: Protein
SIO_000068: ncbiprotein

position:60947:-1
position: 60947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:66655:-1
position: 66655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65540-66655:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:63876-64094:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:62616-62742:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:60947-60999:-1:exon

ACTL6B
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: ACTL6B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(67421..77324)
location: region:67421-77324:-1
so has part: feature:67421-77324:-1:exon
subclass of: SO_0000010

115492705
type: Gene
SIO_000068: ncbigene

position:67421:-1
position: 67421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:77324:-1
position: 77324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67421-77324:-1:exon

ACTL6B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: ACTL6B
product: actin like 6B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041712189.1
SIO_010081: ACTL6B
subclass of: SO_0000673
so part of: ACTL6B
location: complement(join(67421..67613,68048..68142,68236..68322,69475..69570,69664..69744,70683..70797,70917..70978,71606..71695,72057..72163,72606..72700,73507..73604,73676..73776,74361..74526,76108..76184,77233..77324))
location: region:67421-77324:-1
so has part: feature:77233-77324:-1:exon
so has part: feature:76108-76184:-1:exon
so has part: feature:74361-74526:-1:exon
so has part: feature:73676-73776:-1:exon
so has part: feature:73507-73604:-1:exon
so has part: feature:72606-72700:-1:exon
so has part: feature:72057-72163:-1:exon
so has part: feature:71606-71695:-1:exon
so has part: feature:70917-70978:-1:exon
so has part: feature:70683-70797:-1:exon
so has part: feature:69664-69744:-1:exon
so has part: feature:69475-69570:-1:exon
so has part: feature:68236-68322:-1:exon
so has part: feature:68048-68142:-1:exon
so has part: feature:67421-67613:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:77233-77324:-1:exon

position:77233:-1
position: 77233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:76108-76184:-1:exon

position:76108:-1
position: 76108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:76184:-1
position: 76184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:74361-74526:-1:exon

position:74361:-1
position: 74361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:74526:-1
position: 74526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:73676-73776:-1:exon

position:73676:-1
position: 73676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:73776:-1
position: 73776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:73507-73604:-1:exon

position:73507:-1
position: 73507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:73604:-1
position: 73604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:72606-72700:-1:exon

position:72606:-1
position: 72606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:72700:-1
position: 72700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:72057-72163:-1:exon

position:72057:-1
position: 72057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:72163:-1
position: 72163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:71606-71695:-1:exon

position:71606:-1
position: 71606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:71695:-1
position: 71695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:70917-70978:-1:exon

position:70917:-1
position: 70917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:70978:-1
position: 70978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:70683-70797:-1:exon

position:70683:-1
position: 70683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:70797:-1
position: 70797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:69664-69744:-1:exon

position:69664:-1
position: 69664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:69744:-1
position: 69744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:69475-69570:-1:exon

position:69475:-1
position: 69475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:69570:-1
position: 69570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:68236-68322:-1:exon

position:68236:-1
position: 68236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68322:-1
position: 68322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:68048-68142:-1:exon

position:68048:-1
position: 68048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68142:-1
position: 68142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:67421-67613:-1:exon

position:67613:-1
position: 67613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ACTL6B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: ACTL6B
product: actin like 6B, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 85 samples with support for all annotated introns
transcript id: XM_041712188.1
SIO_010081: ACTL6B
subclass of: SO_0000673
so part of: ACTL6B
location: complement(join(67421..68142,68236..68322,69475..69570,69664..69744,70683..70797,70917..70978,71606..71695,72057..72163,72606..72700,73507..73604,73676..73776,74361..74526,76108..76184,77233..77324))
location: region:67421-77324:-1
so has part: feature:77233-77324:-1:exon
so has part: feature:76108-76184:-1:exon
so has part: feature:74361-74526:-1:exon
so has part: feature:73676-73776:-1:exon
so has part: feature:73507-73604:-1:exon
so has part: feature:72606-72700:-1:exon
so has part: feature:72057-72163:-1:exon
so has part: feature:71606-71695:-1:exon
so has part: feature:70917-70978:-1:exon
so has part: feature:70683-70797:-1:exon
so has part: feature:69664-69744:-1:exon
so has part: feature:69475-69570:-1:exon
so has part: feature:68236-68322:-1:exon
so has part: feature:67421-68142:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:77233-77324:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:76108-76184:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:74361-74526:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:73676-73776:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:73507-73604:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:72606-72700:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:72057-72163:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:71606-71695:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:70917-70978:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:70683-70797:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:69664-69744:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:69475-69570:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:68236-68322:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:67421-68142:-1:exon

ACTL6B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: ACTL6B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: actin-like protein 6B
translation: MSGGVYGGDEVGALVFDIGSFSVRAGYAGEDCPKADFPTTVGLLSPEEVALELDGDKDKKGGKVYYIDTNALHVAREGVEVLSPLKNGMIEDWECFQAILDHTYGKHVKSEPGLHPVLMSEAPWNTRAKREKLTELMFEHYNIPAFFLCKTAVLTAFANGRSTGLVLDSGATHTTAIPVHDGYILQQGIVKSPLAGDFISMQCRELFQELNIDIVPPYMIAAKEPVREGAPPSWKKKEKLPQVSKSWHNFTCNEVIQDFQASVLQVSDSPYDEQVAAQMPTVHYEMPNGYNTDYGAERLRIPEGLFDPSNVKGLSGNTMLGVGHVVTTSIGMCDIDIRPGLYGSVIVTGGNTLLQGFTDRLNRELAQKTPPSMRLKLIASNSTMERRFSPWIGGSILASLGTFQQMWISKQEYEEGGKQCVERKCP
SIO_010081: ACTL6B
subclass of: SO_0000673
so part of: ACTL6B
location: complement(join(68062..68142,68236..68322,69475..69570,69664..69744,70683..70797,70917..70978,71606..71695,72057..72163,72606..72700,73507..73604,73676..73776,74361..74526,76108..76184,77233..77257))
location: region:68062-77257:-1
so has part: feature:77233-77257:-1:exon
so has part: feature:76108-76184:-1:exon
so has part: feature:74361-74526:-1:exon
so has part: feature:73676-73776:-1:exon
so has part: feature:73507-73604:-1:exon
so has part: feature:72606-72700:-1:exon
so has part: feature:72057-72163:-1:exon
so has part: feature:71606-71695:-1:exon
so has part: feature:70917-70978:-1:exon
so has part: feature:70683-70797:-1:exon
so has part: feature:69664-69744:-1:exon
so has part: feature:69475-69570:-1:exon
so has part: feature:68236-68322:-1:exon
so has part: feature:68062-68142:-1:exon

XP_041568122.1
type: Protein
SIO_000068: ncbiprotein

position:68062:-1
position: 68062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:77257:-1
position: 77257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:77233-77257:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:76108-76184:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:74361-74526:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:73676-73776:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:73507-73604:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:72606-72700:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:72057-72163:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:71606-71695:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:70917-70978:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:70683-70797:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:69664-69744:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:69475-69570:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:68236-68322:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:68062-68142:-1:exon

ACTL6B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: ACTL6B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: actin-like protein 6B
translation: MSGGVYGGDEVGALVFDIGSFSVRAGYAGEDCPKADFPTTVGLLSPEEVALELDGDKDKKGGKVYYIDTNALHVAREGVEVLSPLKNGMIEDWECFQAILDHTYGKHVKSEPGLHPVLMSEAPWNTRAKREKLTELMFEHYNIPAFFLCKTAVLTAFANGRSTGLVLDSGATHTTAIPVHDGYILQQGIVKSPLAGDFISMQCRELFQELNIDIVPPYMIAAKEPVREGAPPSWKKKEKLPQVSKSWHNFTCNEVIQDFQASVLQVSDSPYDEQVAAQMPTVHYEMPNGYNTDYGAERLRIPEGLFDPSNVKGLSGNTMLGVGHVVTTSIGMCDIDIRPGLYGSVIVTGGNTLLQGFTDRLNRELAQKTPPSMRLKLIASNSTMERRFSPWIGGSILASLGTFQQMWISKQEYEEGGKQCVERKCP
SIO_010081: ACTL6B
subclass of: SO_0000673
so part of: ACTL6B
location: complement(join(68062..68142,68236..68322,69475..69570,69664..69744,70683..70797,70917..70978,71606..71695,72057..72163,72606..72700,73507..73604,73676..73776,74361..74526,76108..76184,77233..77257))
location: region:68062-77257:-1
so has part: feature:77233-77257:-1:exon
so has part: feature:76108-76184:-1:exon
so has part: feature:74361-74526:-1:exon
so has part: feature:73676-73776:-1:exon
so has part: feature:73507-73604:-1:exon
so has part: feature:72606-72700:-1:exon
so has part: feature:72057-72163:-1:exon
so has part: feature:71606-71695:-1:exon
so has part: feature:70917-70978:-1:exon
so has part: feature:70683-70797:-1:exon
so has part: feature:69664-69744:-1:exon
so has part: feature:69475-69570:-1:exon
so has part: feature:68236-68322:-1:exon
so has part: feature:68062-68142:-1:exon

XP_041568123.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:77233-77257:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:76108-76184:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:74361-74526:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:73676-73776:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:73507-73604:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:72606-72700:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:72057-72163:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:71606-71695:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:70917-70978:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:70683-70797:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:69664-69744:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:69475-69570:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:68236-68322:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:68062-68142:-1:exon

LOC115492725
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC115492725
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 77593..79290
location: region:77593-79290:1
so has part: feature:77593-79290:1:exon
subclass of: SO_0000010

115492725
type: Gene
SIO_000068: ncbigene

position:77593:1
position: 77593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:79290:1
position: 79290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:77593-79290:1:exon

LOC115492725
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC115492725
product: ribonuclease P protein subunit p20
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 45 samples with support for all annotated introns
transcript id: XM_030261905.3
SIO_010081: LOC115492725
subclass of: SO_0000673
so part of: LOC115492725
location: join(77593..77696,78146..79290)
location: region:77593-79290:1
so has part: feature:77593-77696:1:exon
so has part: feature:78146-79290:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:77593-77696:1:exon

position:77696:1
position: 77696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:78146-79290:1:exon

position:78146:1
position: 78146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115492725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC115492725
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ribonuclease P protein subunit p20
translation: MSSVRPAAPSPPPGGLPGPPPPSRRRRHHRGAAAPGPPPGSPPAGAPGSNDVFVTSRSDFRAQLRRCQRLLAPGGGPGGPGGAPGAPGGPGELRLHGLGLAVPRTINLALQLQAGAGGTLRLHASTSSVPLRAPRARRRHTGDTGDSGDTGGEDGDTPRHNSAIHIRLCREAPCA
SIO_010081: LOC115492725
subclass of: SO_0000673
so part of: LOC115492725
location: 78147..78674
location: region:78147-78674:1
so has part: feature:78147-78674:1:exon

XP_030117765.3
type: Protein
SIO_000068: ncbiprotein

position:78147:1
position: 78147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:78674:1
position: 78674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78147-78674:1:exon

LOC121468482
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121468482
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 80139..86217
location: region:80139-86217:1
so has part: feature:80139-86217:1:exon
subclass of: SO_0000010

121468482
type: Gene
SIO_000068: ncbigene

position:80139:1
position: 80139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:86217:1
position: 86217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:80139-86217:1:exon

LOC121468482
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC121468482
product: erythropoietin-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 57% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041712160.1
SIO_010081: LOC121468482
subclass of: SO_0000673
so part of: LOC121468482
location: join(80139..80457,82499..82638,83794..83880,84726..84890,85719..86217)
location: region:80139-86217:1
so has part: feature:80139-80457:1:exon
so has part: feature:82499-82638:1:exon
so has part: feature:83794-83880:1:exon
so has part: feature:84726-84890:1:exon
so has part: feature:85719-86217:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:80139-80457:1:exon

position:80457:1
position: 80457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:82499-82638:1:exon

position:82499:1
position: 82499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:82638:1
position: 82638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:83794-83880:1:exon

position:83794:1
position: 83794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:83880:1
position: 83880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:84726-84890:1:exon

position:84726:1
position: 84726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:84890:1
position: 84890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:85719-86217:1:exon

position:85719:1
position: 85719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121468482
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC121468482
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: erythropoietin-like
translation: MSLRGGHPGATGDSRCHGGDPAVSVTSLSPLSPRPRCPLAPLAPEPRSRCAEPHVRPGRGPVSPPGSPVSPPVSPVSPRAGVPGAAPGAAVALGTGTVTATVTLSHWLCAALLLLLLGVPGRPQPPPETPPSLCDPRVIERFILEAREAERGAAGCGPPCDLPEPVAVPDPGVNFNFWRSLDARSRAREVAAGQAALAAAVLRAREQLRDPRVRPSLDRAHGAARSLARLLRGLAAPAPPTPLPPPGPVRVRNVPRLLGVLSRFLRGKVRLFLTDSCQSINHR
SIO_010081: LOC121468482
subclass of: SO_0000673
so part of: LOC121468482
location: join(80139..80457,82499..82638,83794..83880,84726..84890,85719..85859)
location: region:80139-85859:1
so has part: feature:80139-80457:1:exon
so has part: feature:82499-82638:1:exon
so has part: feature:83794-83880:1:exon
so has part: feature:84726-84890:1:exon
so has part: feature:85719-85859:1:exon

XP_041568094.1
type: Protein
SIO_000068: ncbiprotein

position:85859:1
position: 85859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:80139-80457:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:82499-82638:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:83794-83880:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:84726-84890:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:85719-85859:1:exon

LOC121468483
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121468483
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 88257..91893
location: region:88257-91893:1
so has part: feature:88257-91893:1:exon
subclass of: SO_0000010

121468483
type: Gene
SIO_000068: ncbigene

position:88257:1
position: 88257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:91893:1
position: 91893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:88257-91893:1:exon

LOC121468483
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC121468483
product: transferrin receptor protein 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 61% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041712161.1
SIO_010081: LOC121468483
subclass of: SO_0000673
so part of: LOC121468483
location: join(88257..88346,88588..88804,88889..89078,89906..90040,90209..90314,91207..91329,91579..91893)
location: region:88257-91893:1
so has part: feature:88257-88346:1:exon
so has part: feature:88588-88804:1:exon
so has part: feature:88889-89078:1:exon
so has part: feature:89906-90040:1:exon
so has part: feature:90209-90314:1:exon
so has part: feature:91207-91329:1:exon
so has part: feature:91579-91893:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:88257-88346:1:exon

position:88346:1
position: 88346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:88588-88804:1:exon

position:88588:1
position: 88588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:88804:1
position: 88804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:88889-89078:1:exon

position:88889:1
position: 88889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:89078:1
position: 89078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:89906-90040:1:exon

position:89906:1
position: 89906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:90040:1
position: 90040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:90209-90314:1:exon

position:90209:1
position: 90209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:90314:1
position: 90314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:91207-91329:1:exon

position:91207:1
position: 91207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:91329:1
position: 91329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:91579-91893:1:exon

position:91579:1
position: 91579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121468483
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC121468483
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transferrin receptor protein 2-like
translation: MEPLLRRCFLGRPPVGGGPVSYSRHRDPPRAGEGQEEEDEDEDEEGAEPTVRLPRPRPRPHRRPRPRLHPWAALGLSSAAAFLLGLLLAAIGRSPCGGVAVGAGPVPGGSAPDGVWGGANAEAPPPRPRLRELLRRHLRAERVEAWVREVSAGPHGAGSGRGRALAQSVLSALGGAGLSRAWSRPQPLPLPVRGEVTLSWVGPGGEELERLPLDPDAFCAWSAPGTATGGLVFGHYGRPQDLQQLRARGAAPRGNLVLLRLGRGGAAQKPPSRLAPPPGPAPWPGPALTAAVDAAAHGAFSTGTAPPRGGRGLAAANQRPPCGARALARLKAPRPFVKPEGAWPVLLAPPLCGRGFTQSHSHSLLLPLPRGVN
SIO_010081: LOC121468483
subclass of: SO_0000673
so part of: LOC121468483
location: join(88311..88346,88588..88804,88889..89078,89906..90040,90209..90314,91207..91329,91579..91893)
location: region:88311-91893:1
so has part: feature:88311-88346:1:exon
so has part: feature:88588-88804:1:exon
so has part: feature:88889-89078:1:exon
so has part: feature:89906-90040:1:exon
so has part: feature:90209-90314:1:exon
so has part: feature:91207-91329:1:exon
so has part: feature:91579-91893:1:exon

XP_041568095.1
type: Protein
SIO_000068: ncbiprotein

position:88311:1
position: 88311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:88311-88346:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:88588-88804:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:88889-89078:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:89906-90040:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:90209-90314:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:91207-91329:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:91579-91893:1:exon

LOC121468497
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121468497
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 92014..93796
location: region:92014-93796:1
so has part: feature:92014-93796:1:exon
subclass of: SO_0000010

121468497
type: Gene
SIO_000068: ncbigene

position:92014:1
position: 92014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:93796:1
position: 93796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92014-93796:1:exon

LOC121468497
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC121468497
product: ribonuclease P protein subunit p20-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 53 samples with support for all annotated introns
transcript id: XM_041712191.1
SIO_010081: LOC121468497
subclass of: SO_0000673
so part of: LOC121468497
location: join(92014..92094,92506..93796)
location: region:92014-93796:1
so has part: feature:92014-92094:1:exon
so has part: feature:92506-93796:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:92014-92094:1:exon

position:92094:1
position: 92094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:92506-93796:1:exon

position:92506:1
position: 92506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121468497
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC121468497
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ribonuclease P protein subunit p20-like
translation: MSSVRPAAPSPPPGGLPGPPPPPRRRRHHRGAAAPGPPPGSPPAGAPGSNDVFVTSRSDFRAQLRRCQRLLAPGGGPGAPGAAPGAPGELRLHGLGLAVPRTINLALQLQAGAGGTLRLHASTSSVPLRAPRARRRHTGDTGDSGDTGGEDGDTPRHNSAIHIRLCREAPCA
SIO_010081: LOC121468497
subclass of: SO_0000673
so part of: LOC121468497
location: 92507..93025
location: region:92507-93025:1
so has part: feature:92507-93025:1:exon

XP_041568125.1
type: Protein
SIO_000068: ncbiprotein

position:92507:1
position: 92507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:93025:1
position: 93025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92507-93025:1:exon

LOC115492646
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC115492646
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 96589..101774
location: region:96589-101774:1
so has part: feature:96589-101774:1:exon
subclass of: SO_0000010

115492646
type: Gene
SIO_000068: ncbigene

position:96589:1
position: 96589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:101774:1
position: 101774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:96589-101774:1:exon

LOC115492646
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC115492646
product: erythropoietin
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 25% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041712162.1
SIO_010081: LOC115492646
subclass of: SO_0000673
so part of: LOC115492646
location: join(96589..96760,98101..98240,99698..99784,100740..100904,101634..101774)
location: region:96589-101774:1
so has part: feature:96589-96760:1:exon
so has part: feature:98101-98240:1:exon
so has part: feature:99698-99784:1:exon
so has part: feature:100740-100904:1:exon
so has part: feature:101634-101774:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:96589-96760:1:exon

position:96760:1
position: 96760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:98101-98240:1:exon

position:98101:1
position: 98101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:98240:1
position: 98240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:99698-99784:1:exon

position:99698:1
position: 99698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:99784:1
position: 99784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:100740-100904:1:exon

position:100740:1
position: 100740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:100904:1
position: 100904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:101634-101774:1:exon

position:101634:1
position: 101634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115492646
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC115492646
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: erythropoietin
translation: MSPPCPPVSVSVSVPPRVGVGVPPCRCPPHAPIPVSPPVSVSLSVSVSPAAAAPCPVRLCAALLLLLLGVPGRPQPPPETPPSLCDPRVIERFILEAREAERGAAGCGPHCDLPEPVAVPDPGVNFNFWRSLDARSRAREVAAGQAALAAAVLRAREQLRDPRVRPSLDRAHGAARSLARLLRGLAAPAPPTPLPPPGPVRVRNVPRLLGVLSRFLRGKVRLFLTDSCQSINHR
SIO_010081: LOC115492646
subclass of: SO_0000673
so part of: LOC115492646
location: join(96589..96760,98101..98240,99698..99784,100740..100904,101634..101774)
location: region:96589-101774:1
so has part: feature:96589-96760:1:exon
so has part: feature:98101-98240:1:exon
so has part: feature:99698-99784:1:exon
so has part: feature:100740-100904:1:exon
so has part: feature:101634-101774:1:exon

XP_041568096.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:96589-96760:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:98101-98240:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:99698-99784:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:100740-100904:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:101634-101774:1:exon

LOC121468484
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121468484
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 104131..116444
location: region:104131-116444:1
so has part: feature:104131-116444:1:exon
subclass of: SO_0000010

121468484
type: Gene
SIO_000068: ncbigene

position:104131:1
position: 104131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:116444:1
position: 116444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:104131-116444:1:exon

LOC121468484
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC121468484
product: transferrin receptor protein 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 80% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041712163.1
SIO_010081: LOC121468484
subclass of: SO_0000673
so part of: LOC121468484
location: join(104131..104219,104358..104574,104659..104848,105376..105510,105691..105796,106162..106284,107284..107400,107974..108110,108986..109152,109983..110189,110875..110957,111029..111092,111173..111240,111323..111399,112562..112646,113536..113748,114299..114439,115282..115615,116335..116444)
location: region:104131-116444:1
so has part: feature:104131-104219:1:exon
so has part: feature:104358-104574:1:exon
so has part: feature:104659-104848:1:exon
so has part: feature:105376-105510:1:exon
so has part: feature:105691-105796:1:exon
so has part: feature:106162-106284:1:exon
so has part: feature:107284-107400:1:exon
so has part: feature:107974-108110:1:exon
so has part: feature:108986-109152:1:exon
so has part: feature:109983-110189:1:exon
so has part: feature:110875-110957:1:exon
so has part: feature:111029-111092:1:exon
so has part: feature:111173-111240:1:exon
so has part: feature:111323-111399:1:exon
so has part: feature:112562-112646:1:exon
so has part: feature:113536-113748:1:exon
so has part: feature:114299-114439:1:exon
so has part: feature:115282-115615:1:exon
so has part: feature:116335-116444:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:104131-104219:1:exon

position:104219:1
position: 104219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:104358-104574:1:exon

position:104358:1
position: 104358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:104574:1
position: 104574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:104659-104848:1:exon

position:104659:1
position: 104659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:104848:1
position: 104848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:105376-105510:1:exon

position:105376:1
position: 105376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:105510:1
position: 105510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:105691-105796:1:exon

position:105691:1
position: 105691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:105796:1
position: 105796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:106162-106284:1:exon

position:106162:1
position: 106162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:106284:1
position: 106284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:107284-107400:1:exon

position:107284:1
position: 107284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:107400:1
position: 107400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:107974-108110:1:exon

position:107974:1
position: 107974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108110:1
position: 108110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:108986-109152:1:exon

position:108986:1
position: 108986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:109152:1
position: 109152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:109983-110189:1:exon

position:109983:1
position: 109983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:110189:1
position: 110189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:110875-110957:1:exon

position:110875:1
position: 110875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:110957:1
position: 110957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:111029-111092:1:exon

position:111029:1
position: 111029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:111092:1
position: 111092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:111173-111240:1:exon

position:111173:1
position: 111173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:111240:1
position: 111240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:111323-111399:1:exon

position:111323:1
position: 111323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:111399:1
position: 111399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:112562-112646:1:exon

position:112562:1
position: 112562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:112646:1
position: 112646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:113536-113748:1:exon

position:113536:1
position: 113536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:113748:1
position: 113748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:114299-114439:1:exon

position:114299:1
position: 114299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:114439:1
position: 114439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:115282-115615:1:exon

position:115282:1
position: 115282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:115615:1
position: 115615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:116335-116444:1:exon

position:116335:1
position: 116335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121468484
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC121468484
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transferrin receptor protein 2-like
translation: MEPLLRRCFLGRPPVGGGPVSYSRHRDPPRAGEGQQEEEEDEDEEGAEPTVRLPRPRPRPQHRPRPRLHPWAALGLSSAAAFLLGLLLAAIGRSPCGGGAVGAGPVPGGSAPDGVWGGANAEAPPPRPRLRELLRRHLRAERVEAWVREVSAGPHGAGSGRGRALAQSVLSALGGAGLSRAWSRPQPLPLPVRGEVTLSWVGPGGEELERLPLDPDAFCAWSAPGTATGGLVFGHYGRPQDLQQLRARGAAPRGNLVLLRLGRGGAAEKVAAAAAAGAVGVLLFPDPRDSAGPGGGPGLGGNTAVTLSVQDGPGDPFSRGFPSLGGRAPPGPPPGVPPIPAHPVSAATAARLLRSLGAPRAPPHWGVPGGALRFRPRPGGRRLRLRVGGGTRPGTLTSVFGALRGRLEPVGVVSGAWPQTGVTNRAGGGVASLTWPRPDCYVIVGAQRDSLGPGAAASGVGTALLLELARFFAAIGREGFQLRRTLLFASWDGAEFGHLGATEWLEGYPGLLHTKVAAYISLDRAVLGAERLVVRASPTLGTLVESALEQVESPNEGGKSLLEQLRQPGRGWESDLVRPLSPEGGAFPFTAAAGVPALEFSFDELPGGGSGAALGTAEDTLRRLGARLRGRLPAVAEAAAAVAAQLLLRLGHEPRLPLDPGALGDALVRQLAPLQARGLSLQCLSSARGGVVRAAAALRRDMAGADGGNERLNRGFNARLMAAEASLLSPFVSPLVTPFRHVLLGRGGHTLRALVAELGHGDTGGDIGDSGTARGRLRVALLAWTLRGTAGALAGDSGDLGDMGGAGDSGGCGHLGDIGGDGRGGLGDTGDIGAAFIGCDPELGRIKAAGATPPWPRPQGHARVGSAHF
SIO_010081: LOC121468484
subclass of: SO_0000673
so part of: LOC121468484
location: join(104184..104219,104358..104574,104659..104848,105376..105510,105691..105796,106162..106284,107284..107400,107974..108110,108986..109152,109983..110189,110875..110957,111029..111092,111173..111240,111323..111399,112562..112646,113536..113748,114299..114439,115282..115615,116335..116444)
location: region:104184-116444:1
so has part: feature:104184-104219:1:exon
so has part: feature:104358-104574:1:exon
so has part: feature:104659-104848:1:exon
so has part: feature:105376-105510:1:exon
so has part: feature:105691-105796:1:exon
so has part: feature:106162-106284:1:exon
so has part: feature:107284-107400:1:exon
so has part: feature:107974-108110:1:exon
so has part: feature:108986-109152:1:exon
so has part: feature:109983-110189:1:exon
so has part: feature:110875-110957:1:exon
so has part: feature:111029-111092:1:exon
so has part: feature:111173-111240:1:exon
so has part: feature:111323-111399:1:exon
so has part: feature:112562-112646:1:exon
so has part: feature:113536-113748:1:exon
so has part: feature:114299-114439:1:exon
so has part: feature:115282-115615:1:exon
so has part: feature:116335-116444:1:exon

XP_041568097.1
type: Protein
SIO_000068: ncbiprotein

position:104184:1
position: 104184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:104184-104219:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:104358-104574:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:104659-104848:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:105376-105510:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:105691-105796:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:106162-106284:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:107284-107400:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:107974-108110:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:108986-109152:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:109983-110189:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:110875-110957:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:111029-111092:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:111173-111240:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:111323-111399:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:112562-112646:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:113536-113748:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:114299-114439:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:115282-115615:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:116335-116444:1:exon

LOC121468485
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121468485
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(117212..142669)
location: region:117212-142669:-1
so has part: feature:117212-142669:-1:exon
subclass of: SO_0000010

121468485
type: Gene
SIO_000068: ncbigene

position:117212:-1
position: 117212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:142669:-1
position: 142669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:117212-142669:-1:exon

LOC121468485
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC121468485
product: ephrin type-B receptor 4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 71 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041712164.1
SIO_010081: LOC121468485
subclass of: SO_0000673
so part of: LOC121468485
location: complement(join(117212..117458,117577..117663,119469..119662,122031..122180,123790..124008,125306..125556,128311..128424,129037..129086,129666..129760,130908..131054,132036..132166,133720..134367,135691..135846,137898..137976,138187..140241,141130..141200,142557..142669))
location: region:117212-142669:-1
so has part: feature:142557-142669:-1:exon
so has part: feature:141130-141200:-1:exon
so has part: feature:138187-140241:-1:exon
so has part: feature:137898-137976:-1:exon
so has part: feature:135691-135846:-1:exon
so has part: feature:133720-134367:-1:exon
so has part: feature:132036-132166:-1:exon
so has part: feature:130908-131054:-1:exon
so has part: feature:129666-129760:-1:exon
so has part: feature:129037-129086:-1:exon
so has part: feature:128311-128424:-1:exon
so has part: feature:125306-125556:-1:exon
so has part: feature:123790-124008:-1:exon
so has part: feature:122031-122180:-1:exon
so has part: feature:119469-119662:-1:exon
so has part: feature:117577-117663:-1:exon
so has part: feature:117212-117458:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:142557-142669:-1:exon

position:142557:-1
position: 142557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:141130-141200:-1:exon

position:141130:-1
position: 141130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:141200:-1
position: 141200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:138187-140241:-1:exon

position:138187:-1
position: 138187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:140241:-1
position: 140241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:137898-137976:-1:exon

position:137898:-1
position: 137898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:137976:-1
position: 137976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:135691-135846:-1:exon

position:135691:-1
position: 135691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:135846:-1
position: 135846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:133720-134367:-1:exon

position:133720:-1
position: 133720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:134367:-1
position: 134367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:132036-132166:-1:exon

position:132036:-1
position: 132036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:132166:-1
position: 132166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:130908-131054:-1:exon

position:130908:-1
position: 130908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:131054:-1
position: 131054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:129666-129760:-1:exon

position:129666:-1
position: 129666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:129760:-1
position: 129760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:129037-129086:-1:exon

position:129037:-1
position: 129037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:129086:-1
position: 129086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:128311-128424:-1:exon

position:128311:-1
position: 128311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:128424:-1
position: 128424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:125306-125556:-1:exon

position:125306:-1
position: 125306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:125556:-1
position: 125556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:123790-124008:-1:exon

position:123790:-1
position: 123790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:124008:-1
position: 124008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:122031-122180:-1:exon

position:122031:-1
position: 122031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:122180:-1
position: 122180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:119469-119662:-1:exon

position:119469:-1
position: 119469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:119662:-1
position: 119662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:117577-117663:-1:exon

position:117577:-1
position: 117577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:117663:-1
position: 117663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:117212-117458:-1:exon

position:117458:-1
position: 117458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121468485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC121468485
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ephrin type-B receptor 4-like
translation: MALWLLWLWVPLGLAEEETLLDTRLETSELRWTVHPEGEGQWEELSALDAELGAAVRTFEVCSGRGPNPAHNSPNPAHNSRNPAHNSPNPAHNSRNPAHNSRNPAQNGFSSAQNGFSPAQNGFSSAQNSWSPAQNSWSPAQNSWSPAQNSWSPAQNSWLRSRWVRRGAATTVMAEIRFTVMACDGHGGTRGARGARGAPDTPGEMPRDTPGDTPGDTPGDTPGDTPGHDPKPVNLHGNDPKPLSFYGNDPKPVDLYGNDPKPINFHGNNPELVNLHGNNPKPTNFHGNDPKPIDLHGNDPKNLNFYGNDTKPINLHGNNPKNLNFYGNDPKLINLHGNYAKPIDLHGEDPKLLHFSRNNPKYINLHGDDPKLLNFSRNDPKPIDLHGNNPKPIDLHGNKPNNLNFYGNDPKPIDLHGNNPEDFDLHGNNPKTLNFYGNDPKPIDLHGEDPKLLSFSRNDPKPIDLHGNDPKLLHFSRNDPKPIDLHGDDPKLLHFSRNDPKYIDLHGNDPKPLNFSRNNPKPIDLHGDDPKPLNFSINDPDPAPPPPRGRRRRAAARTCKETFSVFYHESDADTATATSPPWMENPYVKVDTVAAEHLTRRPGGGAGAPRGRVNRKVLRLGPLSRAGFYLAFQDLGACMALLSVRLFFRRCPAATARLARFPATVPAELVAPVPGVCVPGAVPAGEGEPLMYCREDGRWAEPPALGCVCGPGMEPGEGTGCRREFGGVWGVFGALGCVCGPGMEPGEGTGCRPCPPETFKAEAGGGRCRPCPPQSEAPSPGAPSCRCRPGFFRAPGEGPPERCSAPPSAPRALSARLNGSVVRLSWSPPRAGAERPDLRYSVGCRACPPARGAPPECGPCEPLAWAPPPQGLRTPAVSAAGLRPRVTYSFRVSARSGVSPPGPPEPPAAEINVTAGADGETPKRPKTAPKSSKTTLNSPKTAKNGPKTIPKTPPEPPAAEINVTAGADGETPKTAKKRPKNAQNGPKTPQNGQKRPQNHLKQPKTPPGAPRRRDQRHCWGLPPPVSDVVRVGGGPGGVTLAWPSPPQGPPGPPVLDYEVKFYEKLGGGEGPPQFLKVPRPRAELGGLRRGGLYGVRVRARSEGGYGDFGPETTPGGVPGGSWRAPPSSGGSWCWRCWGGALACRRRWRLRVEKQRRRPGGLGRKLYIDPLSYEEPEGALRDFATEIDAAHVTIHEVIGAGEFGEVWRGRLALPGQPEAEVAVKTLKGGAGERQRREFLREAARMGQFRHPNVVRLRGVVSTAGPPAMIVTEFLLHGALDAFLRGREGTLPTLQLVAMLRGIAAGMRYLAEAGFVHRDLAARNVLVDAHLVCKVSDFGLSRALGGARDSDPTYTSSLGGKIPIRWTAPEAIAFRTFTSASDVWSFGIVMWEVLSFGERPYWDMSNQDVINAVEQDYRLPPPPRCPAPLHRLMLQCWQRQRGARPTFPHLLRALDHLIRRPETLRPPAADPRSPAPSHLEPGRCEEPSGGAGLELLPRLRGEDLLHMGVAPGGRRPRVLEGAQSPPGPPKGDPQC
SIO_010081: LOC121468485
subclass of: SO_0000673
so part of: LOC121468485
location: complement(join(117356..117458,117577..117663,119469..119662,122031..122180,123790..124008,125306..125556,128311..128424,129037..129086,129666..129760,130908..131054,132036..132166,133720..134367,135691..135846,137898..137976,138187..140241,141130..141200,142557..142608))
location: region:117356-142608:-1
so has part: feature:142557-142608:-1:exon
so has part: feature:141130-141200:-1:exon
so has part: feature:138187-140241:-1:exon
so has part: feature:137898-137976:-1:exon
so has part: feature:135691-135846:-1:exon
so has part: feature:133720-134367:-1:exon
so has part: feature:132036-132166:-1:exon
so has part: feature:130908-131054:-1:exon
so has part: feature:129666-129760:-1:exon
so has part: feature:129037-129086:-1:exon
so has part: feature:128311-128424:-1:exon
so has part: feature:125306-125556:-1:exon
so has part: feature:123790-124008:-1:exon
so has part: feature:122031-122180:-1:exon
so has part: feature:119469-119662:-1:exon
so has part: feature:117577-117663:-1:exon
so has part: feature:117356-117458:-1:exon

XP_041568098.1
type: Protein
SIO_000068: ncbiprotein

position:117356:-1
position: 117356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:142608:-1
position: 142608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:142557-142608:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:141130-141200:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:138187-140241:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:137898-137976:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:135691-135846:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:133720-134367:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:132036-132166:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:130908-131054:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:129666-129760:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:129037-129086:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:128311-128424:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:125306-125556:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:123790-124008:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:122031-122180:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:119469-119662:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:117577-117663:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:117356-117458:-1:exon

SRRT
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: SRRT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 147066..191929
location: region:147066-191929:1
so has part: feature:147066-191929:1:exon
subclass of: SO_0000010

121468508
type: Gene
SIO_000068: ncbigene

position:147066:1
position: 147066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:191929:1
position: 191929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147066-191929:1:exon

SRRT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: SRRT
product: serrate, RNA effector molecule
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_041712210.1
SIO_010081: SRRT
subclass of: SO_0000673
so part of: SRRT
location: join(147066..147224,149234..149359,154985..155140,158466..158654,163592..163761,168534..168698,169694..169809,170569..170662,172038..172233,173688..173749,174841..174919,177221..177484,180299..180520,181512..181665,185007..185200,187789..187930,188860..188952,189851..189956,191775..191929)
location: region:147066-191929:1
so has part: feature:147066-147224:1:exon
so has part: feature:149234-149359:1:exon
so has part: feature:154985-155140:1:exon
so has part: feature:158466-158654:1:exon
so has part: feature:163592-163761:1:exon
so has part: feature:168534-168698:1:exon
so has part: feature:169694-169809:1:exon
so has part: feature:170569-170662:1:exon
so has part: feature:172038-172233:1:exon
so has part: feature:173688-173749:1:exon
so has part: feature:174841-174919:1:exon
so has part: feature:177221-177484:1:exon
so has part: feature:180299-180520:1:exon
so has part: feature:181512-181665:1:exon
so has part: feature:185007-185200:1:exon
so has part: feature:187789-187930:1:exon
so has part: feature:188860-188952:1:exon
so has part: feature:189851-189956:1:exon
so has part: feature:191775-191929:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:147066-147224:1:exon

position:147224:1
position: 147224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:149234-149359:1:exon

position:149234:1
position: 149234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:149359:1
position: 149359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:154985-155140:1:exon

position:154985:1
position: 154985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:155140:1
position: 155140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:158466-158654:1:exon

position:158466:1
position: 158466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:158654:1
position: 158654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:163592-163761:1:exon

position:163592:1
position: 163592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:163761:1
position: 163761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:168534-168698:1:exon

position:168534:1
position: 168534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:168698:1
position: 168698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:169694-169809:1:exon

position:169694:1
position: 169694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:169809:1
position: 169809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:170569-170662:1:exon

position:170569:1
position: 170569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:170662:1
position: 170662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:172038-172233:1:exon

position:172038:1
position: 172038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:172233:1
position: 172233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:173688-173749:1:exon

position:173688:1
position: 173688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:173749:1
position: 173749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:174841-174919:1:exon

position:174841:1
position: 174841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:174919:1
position: 174919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:177221-177484:1:exon

position:177221:1
position: 177221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:177484:1
position: 177484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:180299-180520:1:exon

position:180299:1
position: 180299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:180520:1
position: 180520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:181512-181665:1:exon

position:181512:1
position: 181512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:181665:1
position: 181665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:185007-185200:1:exon

position:185007:1
position: 185007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:185200:1
position: 185200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:187789-187930:1:exon

position:187789:1
position: 187789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:187930:1
position: 187930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:188860-188952:1:exon

position:188860:1
position: 188860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:188952:1
position: 188952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:189851-189956:1:exon

position:189851:1
position: 189851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:189956:1
position: 189956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:191775-191929:1:exon

position:191775:1
position: 191775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SRRT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: SRRT
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: serrate RNA effector molecule homolog
translation: MGDSDDEYDRRRRDKFRRERSDYERTRDREERRREEWSDRDWERGRERRSRDYRDYERSRRERFSPPRHELSPPQKRLRRDWDDHADPYHAGYELPYGGGGGAGPTYGPPQAPWGPHEVQHQLLQHQLLPIQARLGSIAEVELGAAPPVLKSFKEFLLSLDDAVDETEAVKRYNDYKLDFRRQQLQDFFLAHKDEEWFRSKYHPDEAGKRQQEAQAALRNRLSVFLYLWEHGWFDNLLLDIERAPQIVKTLDAAVIKMEGGTEHDLRILEQEEEEERAEKAEGPKKEEPRPPEPPGKARPSPDGDGGAKAEGAEGAEPAAGAGPEEEGAGPDKAPKTEDGDKEGGAKARPRQRSRDSEEGDSDSGDSEGGARRPPGKDEEPKEDKGAGGAPGPGPLPLGTPPPPKGREGVPGGSPRRGRALHKTCSLFMRNIAPNIAQAEIVALCKRYPGFMRVALSEPQPERRFFRRGWVTFDRSVNIKEICWSLQNIRLRECELSPGVNRDLTRRVRNVSGLTQHRPVVRHDIKLAARLVQALDARARLWSPPGTAGDGTPGDGTGDGTPGDGTGTAEPPPPAQPGAQNPVLRHITDYLIEEVSAEEEELLGQGQGQGQGQGQGQGQGQGQGQGVATAEDGARETNPAEVTVERDEKLLKVLDRLLLYLRIVHSVDYYNTSEYPNEDEMPNRCGIIHVRGPLPPNRVSHGEVSEWQRAFAARLAPLLAGPGAVPEEEAQRLGRKDPEQELEKFVSANTQELGKDKWLCPLSGKKFKGPEFVRKHIFNKHGDKMGAVRKEVLFFNNFLMDPKRPSLPEGGKGPPGLTPGALPYPPQSPQGLLPYGSPRPPMMGYGGSHPYPPGPYGGRGSYETFRGQGGAGGGYLNKPRSRLVRGDPRAIVEYRDLDAPEDVDFF
SIO_010081: SRRT
subclass of: SO_0000673
so part of: SRRT
location: join(147106..147224,149234..149359,154985..155140,158466..158654,163592..163761,168534..168698,169694..169809,170569..170662,172038..172233,173688..173749,174841..174919,177221..177484,180299..180520,181512..181665,185007..185200,187789..187930,188860..188952,189851..189956,191775..191850)
location: region:147106-191850:1
so has part: feature:147106-147224:1:exon
so has part: feature:149234-149359:1:exon
so has part: feature:154985-155140:1:exon
so has part: feature:158466-158654:1:exon
so has part: feature:163592-163761:1:exon
so has part: feature:168534-168698:1:exon
so has part: feature:169694-169809:1:exon
so has part: feature:170569-170662:1:exon
so has part: feature:172038-172233:1:exon
so has part: feature:173688-173749:1:exon
so has part: feature:174841-174919:1:exon
so has part: feature:177221-177484:1:exon
so has part: feature:180299-180520:1:exon
so has part: feature:181512-181665:1:exon
so has part: feature:185007-185200:1:exon
so has part: feature:187789-187930:1:exon
so has part: feature:188860-188952:1:exon
so has part: feature:189851-189956:1:exon
so has part: feature:191775-191850:1:exon

XP_041568144.1
type: Protein
SIO_000068: ncbiprotein

position:147106:1
position: 147106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:191850:1
position: 191850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147106-147224:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:149234-149359:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:154985-155140:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:158466-158654:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:163592-163761:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:168534-168698:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:169694-169809:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:170569-170662:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:172038-172233:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:173688-173749:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:174841-174919:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:177221-177484:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:180299-180520:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:181512-181665:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:185007-185200:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:187789-187930:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:188860-188952:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:189851-189956:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:191775-191850:1:exon

LOC121468509
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121468509
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 160254..160987
location: region:160254-160987:1
so has part: feature:160254-160987:1:exon
subclass of: SO_0000011

121468509
type: Gene
SIO_000068: ncbigene

position:160254:1
position: 160254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:160987:1
position: 160987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:160254-160987:1:exon

LOC121468509
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC121468509
product: uncharacterized LOC121468509
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XR_005978438.1
SIO_010081: LOC121468509
subclass of: SO_0000673
so part of: LOC121468509
location: join(160254..160460,160545..160987)
location: region:160254-160987:1
so has part: feature:160254-160460:1:exon
so has part: feature:160545-160987:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:160254-160460:1:exon

position:160460:1
position: 160460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:160545-160987:1:exon

position:160545:1
position: 160545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121468510
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121468510
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 187997..188736
location: region:187997-188736:1
so has part: feature:187997-188736:1:exon
subclass of: SO_0000011

121468510
type: Gene
SIO_000068: ncbigene

position:187997:1
position: 187997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:188736:1
position: 188736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:187997-188736:1:exon

LOC121468510
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC121468510
product: uncharacterized LOC121468510
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 45 samples with support for all annotated introns
transcript id: XR_005978439.1
SIO_010081: LOC121468510
subclass of: SO_0000673
so part of: LOC121468510
location: join(187997..188097,188703..188736)
location: region:187997-188736:1
so has part: feature:187997-188097:1:exon
so has part: feature:188703-188736:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:187997-188097:1:exon

position:188097:1
position: 188097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:188703-188736:1:exon

position:188703:1
position: 188703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TMEM256
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: TMEM256
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(193760..196036)
location: region:193760-196036:-1
so has part: feature:193760-196036:-1:exon
subclass of: SO_0000010

121468517
type: Gene
SIO_000068: ncbigene

position:193760:-1
position: 193760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:196036:-1
position: 196036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:193760-196036:-1:exon

TMEM256
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: TMEM256
product: transmembrane protein 256, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 85 samples with support for all annotated introns
transcript id: XM_041712246.1
SIO_010081: TMEM256
subclass of: SO_0000673
so part of: TMEM256
location: complement(join(193760..193933,195384..195421,195735..196036))
location: region:193760-196036:-1
so has part: feature:195735-196036:-1:exon
so has part: feature:195384-195421:-1:exon
so has part: feature:193760-193933:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:195735-196036:-1:exon

position:195735:-1
position: 195735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:195384-195421:-1:exon

position:195384:-1
position: 195384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:195421:-1
position: 195421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:193760-193933:-1:exon

position:193933:-1
position: 193933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TMEM256
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: TMEM256
product: transmembrane protein 256, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 112 samples with support for all annotated introns
transcript id: XM_041712245.1
SIO_010081: TMEM256
subclass of: SO_0000673
so part of: TMEM256
location: complement(join(193760..193933,195186..195266,195384..195421,195735..196031))
location: region:193760-196031:-1
so has part: feature:195735-196031:-1:exon
so has part: feature:195384-195421:-1:exon
so has part: feature:195186-195266:-1:exon
so has part: feature:193760-193933:-1:exon

position:196031:-1
position: 196031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:195735-196031:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:195384-195421:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:195186-195266:-1:exon

position:195186:-1
position: 195186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:195266:-1
position: 195266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:193760-193933:-1:exon

TMEM256
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: TMEM256
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 256 isoform X2
translation: MRGAGRRKRRAEAEAEAEAEAGPAAMAALWGRVGALSGAAAVAAAAYGAHGMRRSDRDEYQKEAGALLLGGVGLFCAPLYRQGLTGDPAGAAAAPLGGSLLILGWAAMAL
SIO_010081: TMEM256
subclass of: SO_0000673
so part of: TMEM256
location: complement(join(193790..193933,195384..195421,195735..195885))
location: region:193790-195885:-1
so has part: feature:195735-195885:-1:exon
so has part: feature:195384-195421:-1:exon
so has part: feature:193790-193933:-1:exon

XP_041568180.1
type: Protein
SIO_000068: ncbiprotein

position:193790:-1
position: 193790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:195885:-1
position: 195885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:195735-195885:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:195384-195421:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:193790-193933:-1:exon

TMEM256
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: TMEM256
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 256 isoform X1
translation: MRGAGRRKRRAEAEAEAEAEAGPAAMAALWGRVGALSGAAAVAAAAYGAHGMRRSDRDEYQKELYEIANRFHLLHSLALLAVPHCRRPHLAGALLLGGVGLFCAPLYRQGLTGDPAGAAAAPLGGSLLILGWAAMAL
SIO_010081: TMEM256
subclass of: SO_0000673
so part of: TMEM256
location: complement(join(193790..193933,195186..195266,195384..195421,195735..195885))
location: region:193790-195885:-1
so has part: feature:195735-195885:-1:exon
so has part: feature:195384-195421:-1:exon
so has part: feature:195186-195266:-1:exon
so has part: feature:193790-193933:-1:exon

XP_041568179.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:195735-195885:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:195384-195421:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:195186-195266:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:193790-193933:-1:exon

NLGN2
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: NLGN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 200427..212582
location: region:200427-212582:1
so has part: feature:200427-212582:1:exon
subclass of: SO_0000010

121468516
type: Gene
SIO_000068: ncbigene

position:200427:1
position: 200427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:212582:1
position: 212582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:200427-212582:1:exon

NLGN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: NLGN2
product: neuroligin 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 29 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 55 samples with support for all annotated introns
transcript id: XM_041712237.1
SIO_010081: NLGN2
subclass of: SO_0000673
so part of: NLGN2
location: join(200427..200992,204923..204979,206135..206284,207820..208005,209528..210317,211664..212582)
location: region:200427-212582:1
so has part: feature:200427-200992:1:exon
so has part: feature:204923-204979:1:exon
so has part: feature:206135-206284:1:exon
so has part: feature:207820-208005:1:exon
so has part: feature:209528-210317:1:exon
so has part: feature:211664-212582:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:200427-200992:1:exon

position:200992:1
position: 200992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:204923-204979:1:exon

position:204923:1
position: 204923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:204979:1
position: 204979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:206135-206284:1:exon

position:206135:1
position: 206135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:206284:1
position: 206284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:207820-208005:1:exon

position:207820:1
position: 207820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:208005:1
position: 208005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:209528-210317:1:exon

position:209528:1
position: 209528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:210317:1
position: 210317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:211664-212582:1:exon

position:211664:1
position: 211664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NLGN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: NLGN2
product: neuroligin 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 37 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_041712238.1
SIO_010081: NLGN2
subclass of: SO_0000673
so part of: NLGN2
location: join(200427..200992,206135..206284,207820..208005,209528..210317,211664..212582)
location: region:200427-212582:1
so has part: feature:200427-200992:1:exon
so has part: feature:206135-206284:1:exon
so has part: feature:207820-208005:1:exon
so has part: feature:209528-210317:1:exon
so has part: feature:211664-212582:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:200427-200992:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:206135-206284:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:207820-208005:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:209528-210317:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:211664-212582:1:exon

NLGN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: NLGN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuroligin-2 isoform X1
translation: MPPPLPLALFVALWVVHSSSVHSSGHSPDPPGGPGGGSGGPGGGVGGPGGGSGGAGAGSEPDPRFPVVPTQYGRLRGARRDLSNELLGPVQAFLGVPYAAPPLGPRRWAPPEAPAAWGGVRDATAFAPACPQNLRAGPPPLMLPLWLSDNLEAAGAYVAAQSEDCLYLNLYVPTEDGLLGKKREDGAAGGPPPDSDIRDSGKKPVMLFLHGGSYMEGTGNMFDGSVLAAYGNVIVVTMNYRLGVLGFLSTGDQAAKGNYGLLDQIQALRWLHENVGSFGGDPQRITIFGSGAGAACVSLLILSHHSEGLFQKAIAQSGTAIASWSVNYQPLKYTRLLAAKVGCERADTGAAVECLRRQPFRALVDQDVQPARYHVAFGPVVDGDVVPDDPEILMQQGEFLNYDILIGVNQGEGLKFVEDSLESEDGISASYFDFTVSNFVDNLYGYPEGKDILRETIKFMYTDWADRDNGEMRRKTLLALFTDHQWVAPAVATAKLHAEYQSPVYFYTFYHHCQTDARPEWADAAHGDEIPYVFGVPMVGATDLFPCNFSKNDVMLSAVVMTYWTNFAKTGDPNQPVPQDTKFIHTKPNRFEEVVWTRFDGKDKRYLHIGLKPRVRDHYRANKVAFWLELVPHLHNLHQLPHASTTTRLPPPPGPPRRPAPTRRTATPVTPPQRRDDDEDDDDSDGRRRFAPFPGDSRDYSTELSVTVAVGASLLFLNILAFAALYYKRDKRPEPPRGFGTAPPNDLLGRRRDEEPPVLPMKRPGVGGVAGEAVAAVAGPPDYALALRRAPEDAALLPPPPPPPPGAAAAGAAGVALLPGGGGGLTGALHHFGPPPPPEQRPSPPPAPPPLHHAGIGGGGEGEGWGRGGEG
SIO_010081: NLGN2
subclass of: SO_0000673
so part of: NLGN2
location: join(200464..200992,204923..204979,206135..206284,207820..208005,209528..210317,211664..212567)
location: region:200464-212567:1
so has part: feature:200464-200992:1:exon
so has part: feature:204923-204979:1:exon
so has part: feature:206135-206284:1:exon
so has part: feature:207820-208005:1:exon
so has part: feature:209528-210317:1:exon
so has part: feature:211664-212567:1:exon

XP_041568171.1
type: Protein
SIO_000068: ncbiprotein

position:200464:1
position: 200464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:212567:1
position: 212567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:200464-200992:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:204923-204979:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:206135-206284:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:207820-208005:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:209528-210317:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:211664-212567:1:exon

NLGN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: NLGN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuroligin-2 isoform X2
translation: MPPPLPLALFVALWVVHSSSVHSSGHSPDPPGGPGGGSGGPGGGVGGPGGGSGGAGAGSEPDPRFPVVPTQYGRLRGARRDLSNELLGPVQAFLGVPYAAPPLGPRRWAPPEAPAAWGGVRDATAFAPACPQNLRAGPPPLMLPLWLSDNLEAAGAYVAAQSEDCLYLNLYVPTEDDIRDSGKKPVMLFLHGGSYMEGTGNMFDGSVLAAYGNVIVVTMNYRLGVLGFLSTGDQAAKGNYGLLDQIQALRWLHENVGSFGGDPQRITIFGSGAGAACVSLLILSHHSEGLFQKAIAQSGTAIASWSVNYQPLKYTRLLAAKVGCERADTGAAVECLRRQPFRALVDQDVQPARYHVAFGPVVDGDVVPDDPEILMQQGEFLNYDILIGVNQGEGLKFVEDSLESEDGISASYFDFTVSNFVDNLYGYPEGKDILRETIKFMYTDWADRDNGEMRRKTLLALFTDHQWVAPAVATAKLHAEYQSPVYFYTFYHHCQTDARPEWADAAHGDEIPYVFGVPMVGATDLFPCNFSKNDVMLSAVVMTYWTNFAKTGDPNQPVPQDTKFIHTKPNRFEEVVWTRFDGKDKRYLHIGLKPRVRDHYRANKVAFWLELVPHLHNLHQLPHASTTTRLPPPPGPPRRPAPTRRTATPVTPPQRRDDDEDDDDSDGRRRFAPFPGDSRDYSTELSVTVAVGASLLFLNILAFAALYYKRDKRPEPPRGFGTAPPNDLLGRRRDEEPPVLPMKRPGVGGVAGEAVAAVAGPPDYALALRRAPEDAALLPPPPPPPPGAAAAGAAGVALLPGGGGGLTGALHHFGPPPPPEQRPSPPPAPPPLHHAGIGGGGEGEGWGRGGEG
SIO_010081: NLGN2
subclass of: SO_0000673
so part of: NLGN2
location: join(200464..200992,206135..206284,207820..208005,209528..210317,211664..212567)
location: region:200464-212567:1
so has part: feature:200464-200992:1:exon
so has part: feature:206135-206284:1:exon
so has part: feature:207820-208005:1:exon
so has part: feature:209528-210317:1:exon
so has part: feature:211664-212567:1:exon

XP_041568172.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:200464-200992:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:206135-206284:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:207820-208005:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:209528-210317:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:211664-212567:1:exon

NLGN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: NLGN2
product: neuroligin 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_041712239.1
SIO_010081: NLGN2
subclass of: SO_0000673
so part of: NLGN2
location: join(201536..201602,204923..204979,206135..206284,207820..208005,209528..210317,211664..212582)
location: region:201536-212582:1
so has part: feature:201536-201602:1:exon
so has part: feature:204923-204979:1:exon
so has part: feature:206135-206284:1:exon
so has part: feature:207820-208005:1:exon
so has part: feature:209528-210317:1:exon
so has part: feature:211664-212582:1:exon

position:201536:1
position: 201536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:201536-201602:1:exon

position:201602:1
position: 201602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:204923-204979:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:206135-206284:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:207820-208005:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:209528-210317:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:211664-212582:1:exon

NLGN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: NLGN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuroligin-2 isoform X3
translation: MQSEDCLYLNLYVPTEDGLLGKKREDGAAGGPPPDSDIRDSGKKPVMLFLHGGSYMEGTGNMFDGSVLAAYGNVIVVTMNYRLGVLGFLSTGDQAAKGNYGLLDQIQALRWLHENVGSFGGDPQRITIFGSGAGAACVSLLILSHHSEGLFQKAIAQSGTAIASWSVNYQPLKYTRLLAAKVGCERADTGAAVECLRRQPFRALVDQDVQPARYHVAFGPVVDGDVVPDDPEILMQQGEFLNYDILIGVNQGEGLKFVEDSLESEDGISASYFDFTVSNFVDNLYGYPEGKDILRETIKFMYTDWADRDNGEMRRKTLLALFTDHQWVAPAVATAKLHAEYQSPVYFYTFYHHCQTDARPEWADAAHGDEIPYVFGVPMVGATDLFPCNFSKNDVMLSAVVMTYWTNFAKTGDPNQPVPQDTKFIHTKPNRFEEVVWTRFDGKDKRYLHIGLKPRVRDHYRANKVAFWLELVPHLHNLHQLPHASTTTRLPPPPGPPRRPAPTRRTATPVTPPQRRDDDEDDDDSDGRRRFAPFPGDSRDYSTELSVTVAVGASLLFLNILAFAALYYKRDKRPEPPRGFGTAPPNDLLGRRRDEEPPVLPMKRPGVGGVAGEAVAAVAGPPDYALALRRAPEDAALLPPPPPPPPGAAAAGAAGVALLPGGGGGLTGALHHFGPPPPPEQRPSPPPAPPPLHHAGIGGGGEGEGWGRGGEG
SIO_010081: NLGN2
subclass of: SO_0000673
so part of: NLGN2
location: join(201551..201602,204923..204979,206135..206284,207820..208005,209528..210317,211664..212567)
location: region:201551-212567:1
so has part: feature:201551-201602:1:exon
so has part: feature:204923-204979:1:exon
so has part: feature:206135-206284:1:exon
so has part: feature:207820-208005:1:exon
so has part: feature:209528-210317:1:exon
so has part: feature:211664-212567:1:exon

XP_041568173.1
type: Protein
SIO_000068: ncbiprotein

position:201551:1
position: 201551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:201551-201602:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:204923-204979:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:206135-206284:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:207820-208005:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:209528-210317:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:211664-212567:1:exon

NLGN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: NLGN2
product: neuroligin 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_041712241.1
SIO_010081: NLGN2
subclass of: SO_0000673
so part of: NLGN2
location: join(201717..201770,204923..204979,206135..206284,207820..208005,209528..210317,211664..212582)
location: region:201717-212582:1
so has part: feature:201717-201770:1:exon
so has part: feature:204923-204979:1:exon
so has part: feature:206135-206284:1:exon
so has part: feature:207820-208005:1:exon
so has part: feature:209528-210317:1:exon
so has part: feature:211664-212582:1:exon

position:201717:1
position: 201717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:201717-201770:1:exon

position:201770:1
position: 201770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:204923-204979:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:206135-206284:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:207820-208005:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:209528-210317:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:211664-212582:1:exon

NLGN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: NLGN2
product: neuroligin 2, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 68 samples with support for all annotated introns
transcript id: XM_041712244.1
SIO_010081: NLGN2
subclass of: SO_0000673
so part of: NLGN2
location: join(201871..201935,204923..204979,206135..206284,207820..208005,209528..210317,211664..212582)
location: region:201871-212582:1
so has part: feature:201871-201935:1:exon
so has part: feature:204923-204979:1:exon
so has part: feature:206135-206284:1:exon
so has part: feature:207820-208005:1:exon
so has part: feature:209528-210317:1:exon
so has part: feature:211664-212582:1:exon

position:201871:1
position: 201871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:201871-201935:1:exon

position:201935:1
position: 201935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:204923-204979:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:206135-206284:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:207820-208005:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:209528-210317:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:211664-212582:1:exon

NLGN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: NLGN2
product: neuroligin 2, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 52 samples with support for all annotated introns
transcript id: XM_041712242.1
SIO_010081: NLGN2
subclass of: SO_0000673
so part of: NLGN2
location: join(202018..202089,204923..204979,206135..206284,207820..208005,209528..210317,211664..212582)
location: region:202018-212582:1
so has part: feature:202018-202089:1:exon
so has part: feature:204923-204979:1:exon
so has part: feature:206135-206284:1:exon
so has part: feature:207820-208005:1:exon
so has part: feature:209528-210317:1:exon
so has part: feature:211664-212582:1:exon

position:202018:1
position: 202018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:202018-202089:1:exon

position:202089:1
position: 202089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:204923-204979:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:206135-206284:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:207820-208005:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:209528-210317:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:211664-212582:1:exon

NLGN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: NLGN2
product: neuroligin 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_041712240.1
SIO_010081: NLGN2
subclass of: SO_0000673
so part of: NLGN2
location: join(202066..202089,206135..206284,207820..208005,209528..210317,211664..212582)
location: region:202066-212582:1
so has part: feature:202066-202089:1:exon
so has part: feature:206135-206284:1:exon
so has part: feature:207820-208005:1:exon
so has part: feature:209528-210317:1:exon
so has part: feature:211664-212582:1:exon

position:202066:1
position: 202066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:202066-202089:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:206135-206284:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:207820-208005:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:209528-210317:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:211664-212582:1:exon

NLGN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: NLGN2
product: neuroligin 2, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 74 samples with support for all annotated introns
transcript id: XM_041712243.1
SIO_010081: NLGN2
subclass of: SO_0000673
so part of: NLGN2
location: join(202602..202666,204923..204979,206135..206284,207820..208005,209528..210317,211664..212582)
location: region:202602-212582:1
so has part: feature:202602-202666:1:exon
so has part: feature:204923-204979:1:exon
so has part: feature:206135-206284:1:exon
so has part: feature:207820-208005:1:exon
so has part: feature:209528-210317:1:exon
so has part: feature:211664-212582:1:exon

position:202602:1
position: 202602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:202602-202666:1:exon

position:202666:1
position: 202666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:204923-204979:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:206135-206284:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:207820-208005:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:209528-210317:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:211664-212582:1:exon

NLGN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: NLGN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuroligin-2 isoform X4
translation: MLFLHGGSYMEGTGNMFDGSVLAAYGNVIVVTMNYRLGVLGFLSTGDQAAKGNYGLLDQIQALRWLHENVGSFGGDPQRITIFGSGAGAACVSLLILSHHSEGLFQKAIAQSGTAIASWSVNYQPLKYTRLLAAKVGCERADTGAAVECLRRQPFRALVDQDVQPARYHVAFGPVVDGDVVPDDPEILMQQGEFLNYDILIGVNQGEGLKFVEDSLESEDGISASYFDFTVSNFVDNLYGYPEGKDILRETIKFMYTDWADRDNGEMRRKTLLALFTDHQWVAPAVATAKLHAEYQSPVYFYTFYHHCQTDARPEWADAAHGDEIPYVFGVPMVGATDLFPCNFSKNDVMLSAVVMTYWTNFAKTGDPNQPVPQDTKFIHTKPNRFEEVVWTRFDGKDKRYLHIGLKPRVRDHYRANKVAFWLELVPHLHNLHQLPHASTTTRLPPPPGPPRRPAPTRRTATPVTPPQRRDDDEDDDDSDGRRRFAPFPGDSRDYSTELSVTVAVGASLLFLNILAFAALYYKRDKRPEPPRGFGTAPPNDLLGRRRDEEPPVLPMKRPGVGGVAGEAVAAVAGPPDYALALRRAPEDAALLPPPPPPPPGAAAAGAAGVALLPGGGGGLTGALHHFGPPPPPEQRPSPPPAPPPLHHAGIGGGGEGEGWGRGGEG
SIO_010081: NLGN2
subclass of: SO_0000673
so part of: NLGN2
location: join(206164..206284,207820..208005,209528..210317,211664..212567)
location: region:206164-212567:1
so has part: feature:206164-206284:1:exon
so has part: feature:207820-208005:1:exon
so has part: feature:209528-210317:1:exon
so has part: feature:211664-212567:1:exon

XP_041568174.1
type: Protein
SIO_000068: ncbiprotein

position:206164:1
position: 206164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:206164-206284:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:207820-208005:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:209528-210317:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:211664-212567:1:exon

NLGN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: NLGN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuroligin-2 isoform X4
translation: MLFLHGGSYMEGTGNMFDGSVLAAYGNVIVVTMNYRLGVLGFLSTGDQAAKGNYGLLDQIQALRWLHENVGSFGGDPQRITIFGSGAGAACVSLLILSHHSEGLFQKAIAQSGTAIASWSVNYQPLKYTRLLAAKVGCERADTGAAVECLRRQPFRALVDQDVQPARYHVAFGPVVDGDVVPDDPEILMQQGEFLNYDILIGVNQGEGLKFVEDSLESEDGISASYFDFTVSNFVDNLYGYPEGKDILRETIKFMYTDWADRDNGEMRRKTLLALFTDHQWVAPAVATAKLHAEYQSPVYFYTFYHHCQTDARPEWADAAHGDEIPYVFGVPMVGATDLFPCNFSKNDVMLSAVVMTYWTNFAKTGDPNQPVPQDTKFIHTKPNRFEEVVWTRFDGKDKRYLHIGLKPRVRDHYRANKVAFWLELVPHLHNLHQLPHASTTTRLPPPPGPPRRPAPTRRTATPVTPPQRRDDDEDDDDSDGRRRFAPFPGDSRDYSTELSVTVAVGASLLFLNILAFAALYYKRDKRPEPPRGFGTAPPNDLLGRRRDEEPPVLPMKRPGVGGVAGEAVAAVAGPPDYALALRRAPEDAALLPPPPPPPPGAAAAGAAGVALLPGGGGGLTGALHHFGPPPPPEQRPSPPPAPPPLHHAGIGGGGEGEGWGRGGEG
SIO_010081: NLGN2
subclass of: SO_0000673
so part of: NLGN2
location: join(206164..206284,207820..208005,209528..210317,211664..212567)
location: region:206164-212567:1
so has part: feature:206164-206284:1:exon
so has part: feature:207820-208005:1:exon
so has part: feature:209528-210317:1:exon
so has part: feature:211664-212567:1:exon

XP_041568175.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:206164-206284:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:207820-208005:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:209528-210317:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:211664-212567:1:exon

NLGN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: NLGN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuroligin-2 isoform X4
translation: MLFLHGGSYMEGTGNMFDGSVLAAYGNVIVVTMNYRLGVLGFLSTGDQAAKGNYGLLDQIQALRWLHENVGSFGGDPQRITIFGSGAGAACVSLLILSHHSEGLFQKAIAQSGTAIASWSVNYQPLKYTRLLAAKVGCERADTGAAVECLRRQPFRALVDQDVQPARYHVAFGPVVDGDVVPDDPEILMQQGEFLNYDILIGVNQGEGLKFVEDSLESEDGISASYFDFTVSNFVDNLYGYPEGKDILRETIKFMYTDWADRDNGEMRRKTLLALFTDHQWVAPAVATAKLHAEYQSPVYFYTFYHHCQTDARPEWADAAHGDEIPYVFGVPMVGATDLFPCNFSKNDVMLSAVVMTYWTNFAKTGDPNQPVPQDTKFIHTKPNRFEEVVWTRFDGKDKRYLHIGLKPRVRDHYRANKVAFWLELVPHLHNLHQLPHASTTTRLPPPPGPPRRPAPTRRTATPVTPPQRRDDDEDDDDSDGRRRFAPFPGDSRDYSTELSVTVAVGASLLFLNILAFAALYYKRDKRPEPPRGFGTAPPNDLLGRRRDEEPPVLPMKRPGVGGVAGEAVAAVAGPPDYALALRRAPEDAALLPPPPPPPPGAAAAGAAGVALLPGGGGGLTGALHHFGPPPPPEQRPSPPPAPPPLHHAGIGGGGEGEGWGRGGEG
SIO_010081: NLGN2
subclass of: SO_0000673
so part of: NLGN2
location: join(206164..206284,207820..208005,209528..210317,211664..212567)
location: region:206164-212567:1
so has part: feature:206164-206284:1:exon
so has part: feature:207820-208005:1:exon
so has part: feature:209528-210317:1:exon
so has part: feature:211664-212567:1:exon

XP_041568176.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:206164-206284:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:207820-208005:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:209528-210317:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:211664-212567:1:exon

NLGN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: NLGN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuroligin-2 isoform X4
translation: MLFLHGGSYMEGTGNMFDGSVLAAYGNVIVVTMNYRLGVLGFLSTGDQAAKGNYGLLDQIQALRWLHENVGSFGGDPQRITIFGSGAGAACVSLLILSHHSEGLFQKAIAQSGTAIASWSVNYQPLKYTRLLAAKVGCERADTGAAVECLRRQPFRALVDQDVQPARYHVAFGPVVDGDVVPDDPEILMQQGEFLNYDILIGVNQGEGLKFVEDSLESEDGISASYFDFTVSNFVDNLYGYPEGKDILRETIKFMYTDWADRDNGEMRRKTLLALFTDHQWVAPAVATAKLHAEYQSPVYFYTFYHHCQTDARPEWADAAHGDEIPYVFGVPMVGATDLFPCNFSKNDVMLSAVVMTYWTNFAKTGDPNQPVPQDTKFIHTKPNRFEEVVWTRFDGKDKRYLHIGLKPRVRDHYRANKVAFWLELVPHLHNLHQLPHASTTTRLPPPPGPPRRPAPTRRTATPVTPPQRRDDDEDDDDSDGRRRFAPFPGDSRDYSTELSVTVAVGASLLFLNILAFAALYYKRDKRPEPPRGFGTAPPNDLLGRRRDEEPPVLPMKRPGVGGVAGEAVAAVAGPPDYALALRRAPEDAALLPPPPPPPPGAAAAGAAGVALLPGGGGGLTGALHHFGPPPPPEQRPSPPPAPPPLHHAGIGGGGEGEGWGRGGEG
SIO_010081: NLGN2
subclass of: SO_0000673
so part of: NLGN2
location: join(206164..206284,207820..208005,209528..210317,211664..212567)
location: region:206164-212567:1
so has part: feature:206164-206284:1:exon
so has part: feature:207820-208005:1:exon
so has part: feature:209528-210317:1:exon
so has part: feature:211664-212567:1:exon

XP_041568177.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:206164-206284:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:207820-208005:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:209528-210317:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:211664-212567:1:exon

NLGN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: NLGN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuroligin-2 isoform X4
translation: MLFLHGGSYMEGTGNMFDGSVLAAYGNVIVVTMNYRLGVLGFLSTGDQAAKGNYGLLDQIQALRWLHENVGSFGGDPQRITIFGSGAGAACVSLLILSHHSEGLFQKAIAQSGTAIASWSVNYQPLKYTRLLAAKVGCERADTGAAVECLRRQPFRALVDQDVQPARYHVAFGPVVDGDVVPDDPEILMQQGEFLNYDILIGVNQGEGLKFVEDSLESEDGISASYFDFTVSNFVDNLYGYPEGKDILRETIKFMYTDWADRDNGEMRRKTLLALFTDHQWVAPAVATAKLHAEYQSPVYFYTFYHHCQTDARPEWADAAHGDEIPYVFGVPMVGATDLFPCNFSKNDVMLSAVVMTYWTNFAKTGDPNQPVPQDTKFIHTKPNRFEEVVWTRFDGKDKRYLHIGLKPRVRDHYRANKVAFWLELVPHLHNLHQLPHASTTTRLPPPPGPPRRPAPTRRTATPVTPPQRRDDDEDDDDSDGRRRFAPFPGDSRDYSTELSVTVAVGASLLFLNILAFAALYYKRDKRPEPPRGFGTAPPNDLLGRRRDEEPPVLPMKRPGVGGVAGEAVAAVAGPPDYALALRRAPEDAALLPPPPPPPPGAAAAGAAGVALLPGGGGGLTGALHHFGPPPPPEQRPSPPPAPPPLHHAGIGGGGEGEGWGRGGEG
SIO_010081: NLGN2
subclass of: SO_0000673
so part of: NLGN2
location: join(206164..206284,207820..208005,209528..210317,211664..212567)
location: region:206164-212567:1
so has part: feature:206164-206284:1:exon
so has part: feature:207820-208005:1:exon
so has part: feature:209528-210317:1:exon
so has part: feature:211664-212567:1:exon

XP_041568178.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:206164-206284:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:207820-208005:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:209528-210317:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:211664-212567:1:exon

FGF11
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: FGF11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 218458..229184
location: region:218458-229184:1
so has part: feature:218458-229184:1:exon
subclass of: SO_0000010

121468539
type: Gene
SIO_000068: ncbigene

position:218458:1
position: 218458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:229184:1
position: 229184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:218458-229184:1:exon

FGF11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: FGF11
product: fibroblast growth factor 11, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 39 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_041712302.1
SIO_010081: FGF11
subclass of: SO_0000673
so part of: FGF11
location: join(218458..218700,220710..220820,222952..223055,226272..226470,228964..229184)
location: region:218458-229184:1
so has part: feature:218458-218700:1:exon
so has part: feature:220710-220820:1:exon
so has part: feature:222952-223055:1:exon
so has part: feature:226272-226470:1:exon
so has part: feature:228964-229184:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:218458-218700:1:exon

position:218700:1
position: 218700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:220710-220820:1:exon

position:220710:1
position: 220710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:220820:1
position: 220820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:222952-223055:1:exon

position:222952:1
position: 222952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:223055:1
position: 223055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:226272-226470:1:exon

position:226272:1
position: 226272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:226470:1
position: 226470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:228964-229184:1:exon

position:228964:1
position: 228964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FGF11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: FGF11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibroblast growth factor 11 isoform X1
translation: MAALASSLIRQRRGGPRDAPAPRASGPARAPAAARPPSLCQRQLRRLVAKVRDCGRGRRPREKPPEPQLRGAVARLRGGHGHFLQMGPDGRLEGTREEPGPATLFNLIPVGLRVVAIQGTRAGRYVAMNGAGLVYTSVHFTPECRFKECVFQSSHVLYASALYRQRRSGRAWYLGLDRHGRPMAGPRVRKDKAAAHFLPQLLEVALYREPSLHEVEEPPGTPPPPGTPPPPPDDL
SIO_010081: FGF11
subclass of: SO_0000673
so part of: FGF11
location: join(218505..218700,220710..220820,222952..223055,226272..226470,228964..229061)
location: region:218505-229061:1
so has part: feature:218505-218700:1:exon
so has part: feature:220710-220820:1:exon
so has part: feature:222952-223055:1:exon
so has part: feature:226272-226470:1:exon
so has part: feature:228964-229061:1:exon

XP_041568236.1
type: Protein
SIO_000068: ncbiprotein

position:218505:1
position: 218505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:229061:1
position: 229061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:218505-218700:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:220710-220820:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:222952-223055:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:226272-226470:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:228964-229061:1:exon

FGF11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: FGF11
product: fibroblast growth factor 11, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 46 samples with support for all annotated introns
transcript id: XM_041712303.1
SIO_010081: FGF11
subclass of: SO_0000673
so part of: FGF11
location: join(219016..219088,220710..220820,222952..223055,226272..226470,228964..229184)
location: region:219016-229184:1
so has part: feature:219016-219088:1:exon
so has part: feature:220710-220820:1:exon
so has part: feature:222952-223055:1:exon
so has part: feature:226272-226470:1:exon
so has part: feature:228964-229184:1:exon

position:219016:1
position: 219016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:219016-219088:1:exon

position:219088:1
position: 219088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:220710-220820:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:222952-223055:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:226272-226470:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:228964-229184:1:exon

FGF11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: FGF11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibroblast growth factor 11 isoform X2
translation: MGPDGRLEGTREEPGPATLFNLIPVGLRVVAIQGTRAGRYVAMNGAGLVYTSVHFTPECRFKECVFQSSHVLYASALYRQRRSGRAWYLGLDRHGRPMAGPRVRKDKAAAHFLPQLLEVALYREPSLHEVEEPPGTPPPPGTPPPPPDDL
SIO_010081: FGF11
subclass of: SO_0000673
so part of: FGF11
location: join(220769..220820,222952..223055,226272..226470,228964..229061)
location: region:220769-229061:1
so has part: feature:220769-220820:1:exon
so has part: feature:222952-223055:1:exon
so has part: feature:226272-226470:1:exon
so has part: feature:228964-229061:1:exon

XP_041568237.1
type: Protein
SIO_000068: ncbiprotein

position:220769:1
position: 220769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:220769-220820:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:222952-223055:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:226272-226470:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:228964-229061:1:exon

CHRNB1
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: CHRNB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 231404..248052
location: region:231404-248052:1
so has part: feature:231404-248052:1:exon
subclass of: SO_0000010

121468486
type: Gene
SIO_000068: ncbigene

position:231404:1
position: 231404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:248052:1
position: 248052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:231404-248052:1:exon

CHRNB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: CHRNB1
product: cholinergic receptor nicotinic beta 1 subunit
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041712166.1
SIO_010081: CHRNB1
subclass of: SO_0000673
so part of: CHRNB1
location: join(231404..231488,233355..233479,234423..234467,235205..235314,236455..236563,237981..238122,239727..239900,243244..243467,246285..246599,247695..248052)
location: region:231404-248052:1
so has part: feature:231404-231488:1:exon
so has part: feature:233355-233479:1:exon
so has part: feature:234423-234467:1:exon
so has part: feature:235205-235314:1:exon
so has part: feature:236455-236563:1:exon
so has part: feature:237981-238122:1:exon
so has part: feature:239727-239900:1:exon
so has part: feature:243244-243467:1:exon
so has part: feature:246285-246599:1:exon
so has part: feature:247695-248052:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:231404-231488:1:exon

position:231488:1
position: 231488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:233355-233479:1:exon

position:233355:1
position: 233355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:233479:1
position: 233479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:234423-234467:1:exon

position:234423:1
position: 234423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:234467:1
position: 234467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:235205-235314:1:exon

position:235205:1
position: 235205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:235314:1
position: 235314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:236455-236563:1:exon

position:236455:1
position: 236455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:236563:1
position: 236563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:237981-238122:1:exon

position:237981:1
position: 237981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:238122:1
position: 238122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:239727-239900:1:exon

position:239727:1
position: 239727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:239900:1
position: 239900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:243244-243467:1:exon

position:243244:1
position: 243244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:243467:1
position: 243467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:246285-246599:1:exon

position:246285:1
position: 246285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:246599:1
position: 246599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:247695-248052:1:exon

position:247695:1
position: 247695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CHRNB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: CHRNB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: acetylcholine receptor subunit beta
translation: MAALGAPRSFLGSFILLLLLLLLLLLEPGGCSELARHLLGRYRPGVRPGVPEGGPVWVTVGLELNQLIGLDEKNEEMTTKVYLNLSWRDPRLSWDPREQPRVAALRLPAQHIWLPDVGLDNNNDGEFGVSLGVRVSVTPDGVVTWRPPALFRSRCPIRVSHFPFDWQNCSLQFRSGSYGPSELRLRTGGRGGPGGAQAALPPDFRENGQWSLVHRSGGPWGPSGVAFHLVLRREPLFYLSTVLAPCGLITLLAVGVFHLPPDAGEKMSLSLFALLTLTVFLLLLADKVPATSLQVPLIGRYLTGTLVLLTLVVALSVGVLNLHHRSPGTHHLPGWARQLFLQRLPPLLGLRPSPPLSPAPSLGPAPLATPPRASDAYFLRRPAPSELATPTSELTTPPGVTTPLSGSATPLLGVATPPPELREAAAAAAEIARRMRERRRRQRAQDEWRALAMALDRLCLWALLLLTGGCALGTGLDAALHRPPDTPFP
SIO_010081: CHRNB1
subclass of: SO_0000673
so part of: CHRNB1
location: join(231404..231488,233355..233479,234423..234467,235205..235314,236455..236563,237981..238122,239727..239900,243244..243467,246285..246599,247695..247835)
location: region:231404-247835:1
so has part: feature:231404-231488:1:exon
so has part: feature:233355-233479:1:exon
so has part: feature:234423-234467:1:exon
so has part: feature:235205-235314:1:exon
so has part: feature:236455-236563:1:exon
so has part: feature:237981-238122:1:exon
so has part: feature:239727-239900:1:exon
so has part: feature:243244-243467:1:exon
so has part: feature:246285-246599:1:exon
so has part: feature:247695-247835:1:exon

XP_041568100.1
type: Protein
SIO_000068: ncbiprotein

position:247835:1
position: 247835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:231404-231488:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:233355-233479:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:234423-234467:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:235205-235314:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:236455-236563:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:237981-238122:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:239727-239900:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:243244-243467:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:246285-246599:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:247695-247835:1:exon

SENP3
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: SENP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 250373..265059
location: region:250373-265059:1
so has part: feature:250373-265059:1:exon
subclass of: SO_0000010

121468527
type: Gene
SIO_000068: ncbigene

position:250373:1
position: 250373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:265059:1
position: 265059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:250373-265059:1:exon

SENP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: SENP3
product: SUMO specific peptidase 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XM_041712271.1
SIO_010081: SENP3
subclass of: SO_0000673
so part of: SENP3
location: join(250373..250573,252532..253039,253793..254008,255694..255805,257629..257776,258729..258776,259479..259556,261466..261603,263004..263087,263778..263828,264907..265059)
location: region:250373-265059:1
so has part: feature:250373-250573:1:exon
so has part: feature:252532-253039:1:exon
so has part: feature:253793-254008:1:exon
so has part: feature:255694-255805:1:exon
so has part: feature:257629-257776:1:exon
so has part: feature:258729-258776:1:exon
so has part: feature:259479-259556:1:exon
so has part: feature:261466-261603:1:exon
so has part: feature:263004-263087:1:exon
so has part: feature:263778-263828:1:exon
so has part: feature:264907-265059:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:250373-250573:1:exon

position:250573:1
position: 250573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:252532-253039:1:exon

position:252532:1
position: 252532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:253039:1
position: 253039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:253793-254008:1:exon

position:253793:1
position: 253793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:254008:1
position: 254008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:255694-255805:1:exon

position:255694:1
position: 255694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:255805:1
position: 255805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:257629-257776:1:exon

position:257629:1
position: 257629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:257776:1
position: 257776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:258729-258776:1:exon

position:258729:1
position: 258729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:258776:1
position: 258776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:259479-259556:1:exon

position:259479:1
position: 259479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:259556:1
position: 259556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:261466-261603:1:exon

position:261466:1
position: 261466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:261603:1
position: 261603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:263004-263087:1:exon

position:263004:1
position: 263004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:263087:1
position: 263087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:263778-263828:1:exon

position:263778:1
position: 263778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:263828:1
position: 263828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:264907-265059:1:exon

position:264907:1
position: 264907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SENP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: SENP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sentrin-specific protease 3
translation: MKEAPPRPTPVGGATPTRMGGASPSPAPLAEGAGPDRSLVGVASSRGRGQHRPLPLRCYRRRGRRLRLFRWLRLLLSRGAGLWGARPRPRRATPTQGRGKPLVQSKPSEGMLRPLAGLDTPLSAMDTPLSSLATPLLAMDTPLSSLATPLSGIDAPLPPPGVGEGGDGGPAQNGLGAGPGPGCPSPPCPGPILISNVTGGGGAEAGPRPPASLATPPARATPPGGQPSPPLREEHVTCVQSILDEFLQAYGSLIPVSADEVVEKLEDIFQQEFSTPQRRGSVQQLLQSYQRLPGSALLRGFRVSYKRHVLTMDDLQTLYGPNWLNDQVMNMYGDLVMDAVPDKVHFFNSFFYDKLRTRGYEGVQRWTKNVDIFGKELLLIPIHLEVHWSLVAVDVGRRTITYFDSQRTLNRRCPKHICRYLQAEADKKERPDFREGWRGAFKMNVARQNNDSDCGAFVLQYCKFLALGRPFSFTQQDMPHLRRLMYKELCHCQLAL
SIO_010081: SENP3
subclass of: SO_0000673
so part of: SENP3
location: join(252535..253039,253793..254008,255694..255805,257629..257776,258729..258776,259479..259556,261466..261603,263004..263087,263778..263828,264907..265017)
location: region:252535-265017:1
so has part: feature:252535-253039:1:exon
so has part: feature:253793-254008:1:exon
so has part: feature:255694-255805:1:exon
so has part: feature:257629-257776:1:exon
so has part: feature:258729-258776:1:exon
so has part: feature:259479-259556:1:exon
so has part: feature:261466-261603:1:exon
so has part: feature:263004-263087:1:exon
so has part: feature:263778-263828:1:exon
so has part: feature:264907-265017:1:exon

XP_041568205.1
type: Protein
SIO_000068: ncbiprotein

position:252535:1
position: 252535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:265017:1
position: 265017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:252535-253039:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:253793-254008:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:255694-255805:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:257629-257776:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:258729-258776:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:259479-259556:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:261466-261603:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:263004-263087:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:263778-263828:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:264907-265017:1:exon

EIF4A1
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: EIF4A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 266950..295275
location: region:266950-295275:1
so has part: feature:266950-295275:1:exon
subclass of: SO_0000010

121468531
type: Gene
SIO_000068: ncbigene

position:266950:1
position: 266950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:295275:1
position: 295275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:266950-295275:1:exon

EIF4A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: EIF4A1
product: eukaryotic translation initiation factor 4A1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 32 ESTs, 28 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_041712276.1
SIO_010081: EIF4A1
subclass of: SO_0000673
so part of: EIF4A1
location: join(266950..267116,267653..267701,269811..269943,273987..274126,279735..279903,282478..282587,284692..284835,288665..288802,292557..292646,294068..294147,295058..295275)
location: region:266950-295275:1
so has part: feature:266950-267116:1:exon
so has part: feature:267653-267701:1:exon
so has part: feature:269811-269943:1:exon
so has part: feature:273987-274126:1:exon
so has part: feature:279735-279903:1:exon
so has part: feature:282478-282587:1:exon
so has part: feature:284692-284835:1:exon
so has part: feature:288665-288802:1:exon
so has part: feature:292557-292646:1:exon
so has part: feature:294068-294147:1:exon
so has part: feature:295058-295275:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:266950-267116:1:exon

position:267116:1
position: 267116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:267653-267701:1:exon

position:267653:1
position: 267653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:267701:1
position: 267701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:269811-269943:1:exon

position:269811:1
position: 269811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:269943:1
position: 269943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:273987-274126:1:exon

position:273987:1
position: 273987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:274126:1
position: 274126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:279735-279903:1:exon

position:279735:1
position: 279735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:279903:1
position: 279903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:282478-282587:1:exon

position:282478:1
position: 282478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:282587:1
position: 282587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:284692-284835:1:exon

position:284692:1
position: 284692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:284835:1
position: 284835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:288665-288802:1:exon

position:288665:1
position: 288665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:288802:1
position: 288802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:292557-292646:1:exon

position:292557:1
position: 292557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:292646:1
position: 292646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:294068-294147:1:exon

position:294068:1
position: 294068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:294147:1
position: 294147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:295058-295275:1:exon

position:295058:1
position: 295058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

EIF4A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: EIF4A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: eukaryotic initiation factor 4A-I
translation: MSASHDSRSRESGPEGMEPDGVIESNWHEVVDSFDEMNLSEALLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQVELELKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQLEAPHVVVGTPGRVFDMLNRRYLSPKFIKMFVLDEADEMLSRGFKDQIYDIFQKLSGNTQVVLLSATMPLDVLEVTKKFMREPIRILVKKEELTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTLRDIETFYNTAIEEMPLNVADLI
SIO_010081: EIF4A1
subclass of: SO_0000673
so part of: EIF4A1
location: join(267094..267116,267653..267701,269811..269943,273987..274126,279735..279903,282478..282587,284692..284835,288665..288802,292557..292646,294068..294147,295058..295202)
location: region:267094-295202:1
so has part: feature:267094-267116:1:exon
so has part: feature:267653-267701:1:exon
so has part: feature:269811-269943:1:exon
so has part: feature:273987-274126:1:exon
so has part: feature:279735-279903:1:exon
so has part: feature:282478-282587:1:exon
so has part: feature:284692-284835:1:exon
so has part: feature:288665-288802:1:exon
so has part: feature:292557-292646:1:exon
so has part: feature:294068-294147:1:exon
so has part: feature:295058-295202:1:exon

XP_041568210.1
type: Protein
SIO_000068: ncbiprotein

position:267094:1
position: 267094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:295202:1
position: 295202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:267094-267116:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:267653-267701:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:269811-269943:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:273987-274126:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:279735-279903:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:282478-282587:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:284692-284835:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:288665-288802:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:292557-292646:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:294068-294147:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:295058-295202:1:exon

GAL3ST4
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: GAL3ST4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(305687..313309)
location: region:305687-313309:-1
so has part: feature:305687-313309:-1:exon
subclass of: SO_0000010

121468540
type: Gene
SIO_000068: ncbigene

position:305687:-1
position: 305687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:313309:-1
position: 313309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:305687-313309:-1:exon

GAL3ST4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: GAL3ST4
product: galactose-3-O-sulfotransferase 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_041712305.1
SIO_010081: GAL3ST4
subclass of: SO_0000673
so part of: GAL3ST4
location: complement(join(305687..306884,308891..309128,311657..311892,313036..313309))
location: region:305687-313309:-1
so has part: feature:313036-313309:-1:exon
so has part: feature:311657-311892:-1:exon
so has part: feature:308891-309128:-1:exon
so has part: feature:305687-306884:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:313036-313309:-1:exon

position:313036:-1
position: 313036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:311657-311892:-1:exon

position:311657:-1
position: 311657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:311892:-1
position: 311892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:308891-309128:-1:exon

position:308891:-1
position: 308891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:309128:-1
position: 309128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:305687-306884:-1:exon

position:306884:-1
position: 306884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GAL3ST4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: GAL3ST4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: galactose-3-O-sulfotransferase 4
translation: MNPKAPPGRTRPGTPKCCGTPKFCGIPKFWGTPKSWGTPLGAALGVFVTLSFALGLLGGPLRPTRDPKPDRAAPCRPVSHIVFLKTHKTGGSSVVNLLSRYGESRQLRFALPQRYQFRYPEPFRAESVRGFRPGERFDIICHHMRFSPAEVQRVMPNDSFYFSIVRDPGTQGASAFSYFRAAAAAFRCAPSLDAFLAAPRRFFGPGGRGAGLARNPQWFDFGLPAPAAAAEVPALLARLERRFPLVLLAERFDESLVLLRHRLCWPRAAVDVFAHNARGGAAAPTAAQRRRLRAWNALDWALYSHFNRSFWRHVERFGAARLQEEAAELRRRRRRLQERCLRGAGPVPAAAIAEPRLRPFQPPGAEHAVLGFALRPGLPPAERRRCGRMALPELPYTDLLARRQFGNGNGTEWDDF
SIO_010081: GAL3ST4
subclass of: SO_0000673
so part of: GAL3ST4
location: complement(join(306084..306884,308891..309128,311657..311868))
location: region:306084-311868:-1
so has part: feature:311657-311868:-1:exon
so has part: feature:308891-309128:-1:exon
so has part: feature:306084-306884:-1:exon

XP_041568239.1
type: Protein
SIO_000068: ncbiprotein

position:306084:-1
position: 306084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:311868:-1
position: 311868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:311657-311868:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:308891-309128:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:306084-306884:-1:exon

LOC121468520
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121468520
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 314140..325056
location: region:314140-325056:1
so has part: feature:314140-325056:1:exon
subclass of: SO_0000010

121468520
type: Gene
SIO_000068: ncbigene

position:314140:1
position: 314140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:325056:1
position: 325056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:314140-325056:1:exon

LOC121468520
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC121468520
product: cohesin subunit SA-3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_041712255.1
SIO_010081: LOC121468520
subclass of: SO_0000673
so part of: LOC121468520
location: join(314140..314275,317300..317437,318912..319008,319109..319204,320166..320262,321500..321576,324242..325056)
location: region:314140-325056:1
so has part: feature:314140-314275:1:exon
so has part: feature:317300-317437:1:exon
so has part: feature:318912-319008:1:exon
so has part: feature:319109-319204:1:exon
so has part: feature:320166-320262:1:exon
so has part: feature:321500-321576:1:exon
so has part: feature:324242-325056:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:314140-314275:1:exon

position:314275:1
position: 314275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:317300-317437:1:exon

position:317300:1
position: 317300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:317437:1
position: 317437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:318912-319008:1:exon

position:318912:1
position: 318912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:319008:1
position: 319008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:319109-319204:1:exon

position:319109:1
position: 319109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:319204:1
position: 319204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:320166-320262:1:exon

position:320166:1
position: 320166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:320262:1
position: 320262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:321500-321576:1:exon

position:321500:1
position: 321500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:321576:1
position: 321576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:324242-325056:1:exon

position:324242:1
position: 324242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121468520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC121468520
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cohesin subunit SA-3-like
translation: MALRHSPRLRASGSSRGSSSGAPGSGSGSGSGSAPGSSSPGSPEFPEDSDSGSDFEPSLRPRSKRGPPRGSQRSRAPKRSRLSGSDGRDPEPNSLFEAVFSGKVATEPLVDEWLERYRRDREGAFLELLNFTVRSCGCRGVVTPQMFRELQNSEIIRRLTETFQENSPEYPLSRRSPPWRRFWVDFGWNFSGFGCCFCTFLYIYLHLYVFIFIFSPELPGVPAVPPLPAVAPVPGGFWLEFQRLWLLFLYIYLHFCTYIPIYLYFSPELPGVPAVPPLPAVAPVLGGFWLDFV
SIO_010081: LOC121468520
subclass of: SO_0000673
so part of: LOC121468520
location: join(317310..317437,318912..319008,319109..319204,320166..320262,321500..321576,324242..324628)
location: region:317310-324628:1
so has part: feature:317310-317437:1:exon
so has part: feature:318912-319008:1:exon
so has part: feature:319109-319204:1:exon
so has part: feature:320166-320262:1:exon
so has part: feature:321500-321576:1:exon
so has part: feature:324242-324628:1:exon

XP_041568189.1
type: Protein
SIO_000068: ncbiprotein

position:317310:1
position: 317310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:324628:1
position: 324628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:317310-317437:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:318912-319008:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:319109-319204:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:320166-320262:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:321500-321576:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:324242-324628:1:exon

LOC121468487
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121468487
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <325022..362778
location: region:325022-362778:1
so has part: feature:325022-362778:1:exon
subclass of: SO_0000010

121468487
type: Gene
SIO_000068: ncbigene

position:325022:1
position: 325022
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:362778:1
position: 362778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:325022-362778:1:exon

LOC121468487
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC121468487
product: cohesin subunit SA-3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 76% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041712167.1
SIO_010081: LOC121468487
subclass of: SO_0000673
so part of: LOC121468487
location: join(<325022..325223,326598..326749,328941..329014,329738..329861,331554..331652,332658..332737,335347..335454,338121..338208,340137..340242,342268..342389,344316..344405,345031..345120,345954..346157,347782..347852,349588..349687,350926..351006,352115..352207,353958..354053,354751..354808,356412..356527,357218..357319,358586..358731,359847..359990,361064..361254,362072..362168,362718..362778)
location: region:325022-362778:1
so has part: feature:325022-325223:1:exon
so has part: feature:326598-326749:1:exon
so has part: feature:328941-329014:1:exon
so has part: feature:329738-329861:1:exon
so has part: feature:331554-331652:1:exon
so has part: feature:332658-332737:1:exon
so has part: feature:335347-335454:1:exon
so has part: feature:338121-338208:1:exon
so has part: feature:340137-340242:1:exon
so has part: feature:342268-342389:1:exon
so has part: feature:344316-344405:1:exon
so has part: feature:345031-345120:1:exon
so has part: feature:345954-346157:1:exon
so has part: feature:347782-347852:1:exon
so has part: feature:349588-349687:1:exon
so has part: feature:350926-351006:1:exon
so has part: feature:352115-352207:1:exon
so has part: feature:353958-354053:1:exon
so has part: feature:354751-354808:1:exon
so has part: feature:356412-356527:1:exon
so has part: feature:357218-357319:1:exon
so has part: feature:358586-358731:1:exon
so has part: feature:359847-359990:1:exon
so has part: feature:361064-361254:1:exon
so has part: feature:362072-362168:1:exon
so has part: feature:362718-362778:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:325022-325223:1:exon

position:325223:1
position: 325223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:326598-326749:1:exon

position:326598:1
position: 326598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:326749:1
position: 326749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:328941-329014:1:exon

position:328941:1
position: 328941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:329014:1
position: 329014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:329738-329861:1:exon

position:329738:1
position: 329738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:329861:1
position: 329861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:331554-331652:1:exon

position:331554:1
position: 331554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:331652:1
position: 331652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:332658-332737:1:exon

position:332658:1
position: 332658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:332737:1
position: 332737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:335347-335454:1:exon

position:335347:1
position: 335347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:335454:1
position: 335454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:338121-338208:1:exon

position:338121:1
position: 338121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:338208:1
position: 338208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:340137-340242:1:exon

position:340137:1
position: 340137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:340242:1
position: 340242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:342268-342389:1:exon

position:342268:1
position: 342268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:342389:1
position: 342389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:344316-344405:1:exon

position:344316:1
position: 344316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:344405:1
position: 344405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:345031-345120:1:exon

position:345031:1
position: 345031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:345120:1
position: 345120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:345954-346157:1:exon

position:345954:1
position: 345954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:346157:1
position: 346157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:347782-347852:1:exon

position:347782:1
position: 347782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:347852:1
position: 347852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:349588-349687:1:exon

position:349588:1
position: 349588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:349687:1
position: 349687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:350926-351006:1:exon

position:350926:1
position: 350926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:351006:1
position: 351006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:352115-352207:1:exon

position:352115:1
position: 352115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:352207:1
position: 352207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:353958-354053:1:exon

position:353958:1
position: 353958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:354053:1
position: 354053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:354751-354808:1:exon

position:354751:1
position: 354751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:354808:1
position: 354808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:356412-356527:1:exon

position:356412:1
position: 356412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:356527:1
position: 356527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:357218-357319:1:exon

position:357218:1
position: 357218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:357319:1
position: 357319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:358586-358731:1:exon

position:358586:1
position: 358586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:358731:1
position: 358731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:359847-359990:1:exon

position:359847:1
position: 359847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:359990:1
position: 359990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:361064-361254:1:exon

position:361064:1
position: 361064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:361254:1
position: 361254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:362072-362168:1:exon

position:362072:1
position: 362072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:362168:1
position: 362168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:362718-362778:1:exon

position:362718:1
position: 362718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121468487
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC121468487
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cohesin subunit SA-3-like
translation: SPDYPLSRRSPPWRRFRAGFSELLAALVRRARHRELRDGFLLDSWLAFLTGLADSQLRPLRHTGTLAALKLMSALVEVALGVGQQQELCQRQLQAEEAKEPERRGTERLEALQERHRELQEQQEELELLMNGIFKGVFVHRYRDVVPEIRGICMEELGLWVRKFPGSFLTDSHLKYLGWTLHDKHGEVRLRCVRALRGIYGIPEMAPNLELFTERFKPRLVAMAQDKEPEVALEALKLLTELDRSMEEALSPEDCRSVFPVVFVSSRALASAAGTFLFQRLLDPGRFGDGAGDNRNFLRRLAGFFLHSRLHEHAAYLVDSLWDCAGSRLRDWEATTALLLQTGTTLPFQEEQALVQILSSSAHWVILGYTGLYWVILGYTGLYWFVSARERREQREERARLSRSLIPLLPQLLEKFSAEPEAVAALLELLEHLELGMFRTERLDKCLEAVLGRIQEVFGKHSRPFPALSAASRALRALCHPRLSLHGLGDIARSRLGDTLGDRCHRLVTHLLQAVSPDEEDIWGLAATLTRLSVLFSDHDLTPWGLFGPLSELLRRRLGNGDGDNSVPAQVVIPAISCLFFHFFWELSRVPDSGASPADLRDLRSRALLLLSLCQSCLSEPEPELREKALQVLLELLLLLGPGLPHARLRLRAEAALEAQVGLALLDTVFLTRDGNENPDPPESLQRRRALLAAFCRLLLRGALPLRAATDLFKHYAKFSGDFGDILRETLRETRQRDGAEWARTLLLSLQQLFTELLLQEGPALRRLPEFQEIRDLGRRLSLFFSLRHLRHRRPLLQLHSEGITFSLLPPPRLGAVPGIPAGFPLNLPFLEVLSEFSARLQRPDRAHLLSLLERRWRELGLGPDFGADLGDFGADLGDFGAPLLCYRRSLSAAPGPARARRAPRSNERQQRAPSSSPWPPTPTLTSTALRGGPQKRRPSPTLPSSESKRSWESR
SIO_010081: LOC121468487
subclass of: SO_0000673
so part of: LOC121468487
location: join(<325022..325223,326598..326749,328941..329014,329738..329861,331554..331652,332658..332737,335347..335454,338121..338208,340137..340242,342268..342389,344316..344405,345031..345120,345954..346157,347782..347852,349588..349687,350926..351006,352115..352207,353958..354053,354751..354808,356412..356527,357218..357319,358586..358731,359847..359990,361064..361254,362072..362168,362718..362751)
location: region:325022-362751:1
so has part: feature:325022-325223:1:exon
so has part: feature:326598-326749:1:exon
so has part: feature:328941-329014:1:exon
so has part: feature:329738-329861:1:exon
so has part: feature:331554-331652:1:exon
so has part: feature:332658-332737:1:exon
so has part: feature:335347-335454:1:exon
so has part: feature:338121-338208:1:exon
so has part: feature:340137-340242:1:exon
so has part: feature:342268-342389:1:exon
so has part: feature:344316-344405:1:exon
so has part: feature:345031-345120:1:exon
so has part: feature:345954-346157:1:exon
so has part: feature:347782-347852:1:exon
so has part: feature:349588-349687:1:exon
so has part: feature:350926-351006:1:exon
so has part: feature:352115-352207:1:exon
so has part: feature:353958-354053:1:exon
so has part: feature:354751-354808:1:exon
so has part: feature:356412-356527:1:exon
so has part: feature:357218-357319:1:exon
so has part: feature:358586-358731:1:exon
so has part: feature:359847-359990:1:exon
so has part: feature:361064-361254:1:exon
so has part: feature:362072-362168:1:exon
so has part: feature:362718-362751:1:exon

XP_041568101.1
type: Protein
SIO_000068: ncbiprotein

position:362751:1
position: 362751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:325022-325223:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:326598-326749:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:328941-329014:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:329738-329861:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:331554-331652:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:332658-332737:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:335347-335454:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:338121-338208:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:340137-340242:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:342268-342389:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:344316-344405:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:345031-345120:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:345954-346157:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:347782-347852:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:349588-349687:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:350926-351006:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:352115-352207:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:353958-354053:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:354751-354808:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:356412-356527:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:357218-357319:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:358586-358731:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:359847-359990:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:361064-361254:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:362072-362168:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:362718-362751:1:exon

LOC121468521
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121468521
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 346682..351815
location: region:346682-351815:1
so has part: feature:346682-351815:1:exon
subclass of: SO_0000011

121468521
type: Gene
SIO_000068: ncbigene

position:346682:1
position: 346682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:351815:1
position: 351815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:346682-351815:1:exon

LOC121468521
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC121468521
product: uncharacterized LOC121468521
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_005978442.1
SIO_010081: LOC121468521
subclass of: SO_0000673
so part of: LOC121468521
location: join(346682..346731,347782..347852,349588..349687,350926..351006,351777..351815)
location: region:346682-351815:1
so has part: feature:346682-346731:1:exon
so has part: feature:347782-347852:1:exon
so has part: feature:349588-349687:1:exon
so has part: feature:350926-351006:1:exon
so has part: feature:351777-351815:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:346682-346731:1:exon

position:346731:1
position: 346731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:347782-347852:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:349588-349687:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:350926-351006:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:351777-351815:1:exon

position:351777:1
position: 351777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121468524
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121468524
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 363222..364451
location: region:363222-364451:1
so has part: feature:363222-364451:1:exon
subclass of: SO_0000011

121468524
type: Gene
SIO_000068: ncbigene

position:363222:1
position: 363222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:364451:1
position: 364451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:363222-364451:1:exon

LOC121468524
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC121468524
product: uncharacterized LOC121468524
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 58 samples with support for all annotated introns
transcript id: XR_005978443.1
SIO_010081: LOC121468524
subclass of: SO_0000673
so part of: LOC121468524
location: join(363222..363272,363597..363650,364007..364451)
location: region:363222-364451:1
so has part: feature:363222-363272:1:exon
so has part: feature:363597-363650:1:exon
so has part: feature:364007-364451:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:363222-363272:1:exon

position:363272:1
position: 363272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:363597-363650:1:exon

position:363597:1
position: 363597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:363650:1
position: 363650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:364007-364451:1:exon

position:364007:1
position: 364007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

AP4M1
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: AP4M1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(364630..379558)
location: region:364630-379558:-1
so has part: feature:364630-379558:-1:exon
subclass of: SO_0000010

121468522
type: Gene
SIO_000068: ncbigene

position:364630:-1
position: 364630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:379558:-1
position: 379558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:364630-379558:-1:exon

AP4M1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: AP4M1
product: adaptor related protein complex 4 subunit mu 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_041712258.1
SIO_010081: AP4M1
subclass of: SO_0000673
so part of: AP4M1
location: complement(join(364630..365758,369160..369277,370211..370261,370381..370425,370921..371012,371651..371757,372873..372926,373889..373955,374057..374119,374770..374850,374941..375051,375825..375921,377050..377156,378686..378756,379116..379173,379488..379558))
location: region:364630-379558:-1
so has part: feature:379488-379558:-1:exon
so has part: feature:379116-379173:-1:exon
so has part: feature:378686-378756:-1:exon
so has part: feature:377050-377156:-1:exon
so has part: feature:375825-375921:-1:exon
so has part: feature:374941-375051:-1:exon
so has part: feature:374770-374850:-1:exon
so has part: feature:374057-374119:-1:exon
so has part: feature:373889-373955:-1:exon
so has part: feature:372873-372926:-1:exon
so has part: feature:371651-371757:-1:exon
so has part: feature:370921-371012:-1:exon
so has part: feature:370381-370425:-1:exon
so has part: feature:370211-370261:-1:exon
so has part: feature:369160-369277:-1:exon
so has part: feature:364630-365758:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:379488-379558:-1:exon

position:379488:-1
position: 379488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:379116-379173:-1:exon

position:379116:-1
position: 379116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:379173:-1
position: 379173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:378686-378756:-1:exon

position:378686:-1
position: 378686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:378756:-1
position: 378756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:377050-377156:-1:exon

position:377050:-1
position: 377050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:377156:-1
position: 377156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:375825-375921:-1:exon

position:375825:-1
position: 375825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:375921:-1
position: 375921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:374941-375051:-1:exon

position:374941:-1
position: 374941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:375051:-1
position: 375051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:374770-374850:-1:exon

position:374770:-1
position: 374770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:374850:-1
position: 374850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:374057-374119:-1:exon

position:374057:-1
position: 374057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:374119:-1
position: 374119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:373889-373955:-1:exon

position:373889:-1
position: 373889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:373955:-1
position: 373955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:372873-372926:-1:exon

position:372873:-1
position: 372873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:372926:-1
position: 372926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:371651-371757:-1:exon

position:371651:-1
position: 371651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:371757:-1
position: 371757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:370921-371012:-1:exon

position:370921:-1
position: 370921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:371012:-1
position: 371012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:370381-370425:-1:exon

position:370381:-1
position: 370381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:370425:-1
position: 370425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:370211-370261:-1:exon

position:370211:-1
position: 370211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:370261:-1
position: 370261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:369160-369277:-1:exon

position:369160:-1
position: 369160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:369277:-1
position: 369277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:364630-365758:-1:exon

position:365758:-1
position: 365758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

AP4M1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: AP4M1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AP-4 complex subunit mu-1 isoform X3
translation: MLSQLFILSSKGDLLIHRDFRGGSPVPVPEFFRHGVEQPPPFQSLGGLHFAHVRHGGLFFGASTEGDASPFTIIEFLNRLVTLLRDFCGPLSEKSLGMNLALVGELLEELVDFGHIQTTTPEVLRSLVQSEPEVPKPFSLLDLGSVGLFGAETQQSRVAPGAAAARPLPPARGDQPPRPELFVDVLERLSVVIAANGSPLKVEVQGEIRLKSFLPPGTELRIGLTEEFCVGKSELRGYGTPVRVDECSFHSSVSLAEFGSGRVLSLRPEPGEMTLMQYQVQDEIPAPLPFRLFPTARAQPPNRIHLYLKLRCDLPPKSQAINVCLQLPVPKGVSSLSQELSSPDQSAELDLGSRSIRWEIPKIQGGSQLSALFKVPELQPTLCTAAVTEFHGKSRNSMGNHGSGTGAAANTMY
SIO_010081: AP4M1
subclass of: SO_0000673
so part of: AP4M1
location: complement(join(365639..365758,369160..369277,370211..370261,370381..370425,370921..371012,371651..371757,372873..372926,373889..373955,374057..374119,374770..374850,374941..375051,375825..375921,377050..377156,378686..378756,379116..379173))
location: region:365639-379173:-1
so has part: feature:379116-379173:-1:exon
so has part: feature:378686-378756:-1:exon
so has part: feature:377050-377156:-1:exon
so has part: feature:375825-375921:-1:exon
so has part: feature:374941-375051:-1:exon
so has part: feature:374770-374850:-1:exon
so has part: feature:374057-374119:-1:exon
so has part: feature:373889-373955:-1:exon
so has part: feature:372873-372926:-1:exon
so has part: feature:371651-371757:-1:exon
so has part: feature:370921-371012:-1:exon
so has part: feature:370381-370425:-1:exon
so has part: feature:370211-370261:-1:exon
so has part: feature:369160-369277:-1:exon
so has part: feature:365639-365758:-1:exon

XP_041568192.1
type: Protein
SIO_000068: ncbiprotein

position:365639:-1
position: 365639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:379116-379173:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:378686-378756:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:377050-377156:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:375825-375921:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:374941-375051:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:374770-374850:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:374057-374119:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:373889-373955:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:372873-372926:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:371651-371757:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:370921-371012:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:370381-370425:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:370211-370261:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:369160-369277:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:365639-365758:-1:exon

AP4M1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: AP4M1
product: adaptor related protein complex 4 subunit mu 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_041712256.1
SIO_010081: AP4M1
subclass of: SO_0000673
so part of: AP4M1
location: complement(join(365767..365983,369160..369277,370211..370261,370381..370425,370921..371012,371651..371757,372873..372926,373889..373955,374057..374119,374770..374850,374941..375051,375825..375921,377050..377156,378686..378756,379116..379173,379488..379558))
location: region:365767-379558:-1
so has part: feature:379488-379558:-1:exon
so has part: feature:379116-379173:-1:exon
so has part: feature:378686-378756:-1:exon
so has part: feature:377050-377156:-1:exon
so has part: feature:375825-375921:-1:exon
so has part: feature:374941-375051:-1:exon
so has part: feature:374770-374850:-1:exon
so has part: feature:374057-374119:-1:exon
so has part: feature:373889-373955:-1:exon
so has part: feature:372873-372926:-1:exon
so has part: feature:371651-371757:-1:exon
so has part: feature:370921-371012:-1:exon
so has part: feature:370381-370425:-1:exon
so has part: feature:370211-370261:-1:exon
so has part: feature:369160-369277:-1:exon
so has part: feature:365767-365983:-1:exon

position:365767:-1
position: 365767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:379488-379558:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:379116-379173:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:378686-378756:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:377050-377156:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:375825-375921:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:374941-375051:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:374770-374850:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:374057-374119:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:373889-373955:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:372873-372926:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:371651-371757:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:370921-371012:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:370381-370425:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:370211-370261:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:369160-369277:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:365767-365983:-1:exon

position:365983:-1
position: 365983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

AP4M1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: AP4M1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AP-4 complex subunit mu-1 isoform X1
translation: MLSQLFILSSKGDLLIHRDFRGGSPVPVPEFFRHGVEQPPPFQSLGGLHFAHVRHGGLFFGASTEGDASPFTIIEFLNRLVTLLRDFCGPLSEKSLGMNLALVGELLEELVDFGHIQTTTPEVLRSLVQSEPEVPKPFSLLDLGSVGLFGAETQQSRVAPGAAAARPLPPARGDQPPRPELFVDVLERLSVVIAANGSPLKVEVQGEIRLKSFLPPGTELRIGLTEEFCVGKSELRGYGTPVRVDECSFHSSVSLAEFGSGRVLSLRPEPGEMTLMQYQVQDEIPAPLPFRLFPTARAQPPNRIHLYLKLRCDLPPKSQAINVCLQLPVPKGVSSLSQELSSPDQSAELDLGSRSIRWEIPKIQGGSQLSALFKLDLPSLGRAWRLELGPAHASFELPGLSCSGLRVRFLRLLPGTAPRWVRYRSCSEHYVLRL
SIO_010081: AP4M1
subclass of: SO_0000673
so part of: AP4M1
location: complement(join(365801..365983,369160..369277,370211..370261,370381..370425,370921..371012,371651..371757,372873..372926,373889..373955,374057..374119,374770..374850,374941..375051,375825..375921,377050..377156,378686..378756,379116..379173))
location: region:365801-379173:-1
so has part: feature:379116-379173:-1:exon
so has part: feature:378686-378756:-1:exon
so has part: feature:377050-377156:-1:exon
so has part: feature:375825-375921:-1:exon
so has part: feature:374941-375051:-1:exon
so has part: feature:374770-374850:-1:exon
so has part: feature:374057-374119:-1:exon
so has part: feature:373889-373955:-1:exon
so has part: feature:372873-372926:-1:exon
so has part: feature:371651-371757:-1:exon
so has part: feature:370921-371012:-1:exon
so has part: feature:370381-370425:-1:exon
so has part: feature:370211-370261:-1:exon
so has part: feature:369160-369277:-1:exon
so has part: feature:365801-365983:-1:exon

XP_041568190.1
type: Protein
SIO_000068: ncbiprotein

position:365801:-1
position: 365801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:379116-379173:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:378686-378756:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:377050-377156:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:375825-375921:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:374941-375051:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:374770-374850:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:374057-374119:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:373889-373955:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:372873-372926:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:371651-371757:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:370921-371012:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:370381-370425:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:370211-370261:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:369160-369277:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:365801-365983:-1:exon

AP4M1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: AP4M1
product: adaptor related protein complex 4 subunit mu 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_041712257.1
SIO_010081: AP4M1
subclass of: SO_0000673
so part of: AP4M1
location: complement(join(366480..366687,369160..369277,370211..370261,370381..370425,370921..371012,371651..371757,372873..372926,373889..373955,374057..374119,374770..374850,374941..375051,375825..375921,377050..377156,378686..378756,379116..379173,379488..379558))
location: region:366480-379558:-1
so has part: feature:379488-379558:-1:exon
so has part: feature:379116-379173:-1:exon
so has part: feature:378686-378756:-1:exon
so has part: feature:377050-377156:-1:exon
so has part: feature:375825-375921:-1:exon
so has part: feature:374941-375051:-1:exon
so has part: feature:374770-374850:-1:exon
so has part: feature:374057-374119:-1:exon
so has part: feature:373889-373955:-1:exon
so has part: feature:372873-372926:-1:exon
so has part: feature:371651-371757:-1:exon
so has part: feature:370921-371012:-1:exon
so has part: feature:370381-370425:-1:exon
so has part: feature:370211-370261:-1:exon
so has part: feature:369160-369277:-1:exon
so has part: feature:366480-366687:-1:exon

position:366480:-1
position: 366480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:379488-379558:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:379116-379173:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:378686-378756:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:377050-377156:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:375825-375921:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:374941-375051:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:374770-374850:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:374057-374119:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:373889-373955:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:372873-372926:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:371651-371757:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:370921-371012:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:370381-370425:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:370211-370261:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:369160-369277:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:366480-366687:-1:exon

position:366687:-1
position: 366687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

AP4M1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: AP4M1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AP-4 complex subunit mu-1 isoform X2
translation: MLSQLFILSSKGDLLIHRDFRGGSPVPVPEFFRHGVEQPPPFQSLGGLHFAHVRHGGLFFGASTEGDASPFTIIEFLNRLVTLLRDFCGPLSEKSLGMNLALVGELLEELVDFGHIQTTTPEVLRSLVQSEPEVPKPFSLLDLGSVGLFGAETQQSRVAPGAAAARPLPPARGDQPPRPELFVDVLERLSVVIAANGSPLKVEVQGEIRLKSFLPPGTELRIGLTEEFCVGKSELRGYGTPVRVDECSFHSSVSLAEFGSGRVLSLRPEPGEMTLMQYQVQDEIPAPLPFRLFPTARAQPPNRIHLYLKLRCDLPPKSQAINVCLQLPVPKGVSSLSQELSSPDQSAELDLGSRSIRWEIPKIQGGSQLSALFKLDLPSLGRAWRLELGPAHASFELPKTPKQPQKCPNTPKIPINSTNIPQHSPEMAKTSQ
SIO_010081: AP4M1
subclass of: SO_0000673
so part of: AP4M1
location: complement(join(366511..366687,369160..369277,370211..370261,370381..370425,370921..371012,371651..371757,372873..372926,373889..373955,374057..374119,374770..374850,374941..375051,375825..375921,377050..377156,378686..378756,379116..379173))
location: region:366511-379173:-1
so has part: feature:379116-379173:-1:exon
so has part: feature:378686-378756:-1:exon
so has part: feature:377050-377156:-1:exon
so has part: feature:375825-375921:-1:exon
so has part: feature:374941-375051:-1:exon
so has part: feature:374770-374850:-1:exon
so has part: feature:374057-374119:-1:exon
so has part: feature:373889-373955:-1:exon
so has part: feature:372873-372926:-1:exon
so has part: feature:371651-371757:-1:exon
so has part: feature:370921-371012:-1:exon
so has part: feature:370381-370425:-1:exon
so has part: feature:370211-370261:-1:exon
so has part: feature:369160-369277:-1:exon
so has part: feature:366511-366687:-1:exon

XP_041568191.1
type: Protein
SIO_000068: ncbiprotein

position:366511:-1
position: 366511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:379116-379173:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:378686-378756:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:377050-377156:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:375825-375921:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:374941-375051:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:374770-374850:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:374057-374119:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:373889-373955:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:372873-372926:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:371651-371757:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:370921-371012:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:370381-370425:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:370211-370261:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:369160-369277:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:366511-366687:-1:exon

AP4M1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: AP4M1
product: adaptor related protein complex 4 subunit mu 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 51 samples with support for all annotated introns
transcript id: XM_041712259.1
SIO_010081: AP4M1
subclass of: SO_0000673
so part of: AP4M1
location: complement(join(371859..372325,372873..372926,373889..373955,374057..374119,374770..374850,374941..375051,375825..375921,377050..377156,378686..378756,379116..379173,379488..379558))
location: region:371859-379558:-1
so has part: feature:379488-379558:-1:exon
so has part: feature:379116-379173:-1:exon
so has part: feature:378686-378756:-1:exon
so has part: feature:377050-377156:-1:exon
so has part: feature:375825-375921:-1:exon
so has part: feature:374941-375051:-1:exon
so has part: feature:374770-374850:-1:exon
so has part: feature:374057-374119:-1:exon
so has part: feature:373889-373955:-1:exon
so has part: feature:372873-372926:-1:exon
so has part: feature:371859-372325:-1:exon

position:371859:-1
position: 371859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:379488-379558:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:379116-379173:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:378686-378756:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:377050-377156:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:375825-375921:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:374941-375051:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:374770-374850:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:374057-374119:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:373889-373955:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:372873-372926:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:371859-372325:-1:exon

position:372325:-1
position: 372325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

AP4M1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: AP4M1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AP-4 complex subunit mu-1 isoform X4
translation: MLSQLFILSSKGDLLIHRDFRGGSPVPVPEFFRHGVEQPPPFQSLGGLHFAHVRHGGLFFGASTEGDASPFTIIEFLNRLVTLLRDFCGPLSEKSLGMNLALVGELLEELVDFGHIQTTTPEVLRSLVQSEPEVPKPFSLLDLGSVGLFGAETQQSRVAPGAAAARPLPPARGDQPPRPELFVDVLERLSVVIAANGSPLKVEVQGEIRLKSFLPPGTELRIGLTEEFCVGKSELRGYGTPVRVDECTFNPFLFLRNSFFFPFFPQNPTLNAPNAPEPSGIFGNFLEFSGIPGIWALPGYGTPVRVDECTFNPFLFLKNSIFSHSSPFFPPKRHFKRPKPAPNPREFSGIFGNSPEFPGFGRSRVRHAGAGGRVHF
SIO_010081: AP4M1
subclass of: SO_0000673
so part of: AP4M1
location: complement(join(371904..372325,372873..372926,373889..373955,374057..374119,374770..374850,374941..375051,375825..375921,377050..377156,378686..378756,379116..379173))
location: region:371904-379173:-1
so has part: feature:379116-379173:-1:exon
so has part: feature:378686-378756:-1:exon
so has part: feature:377050-377156:-1:exon
so has part: feature:375825-375921:-1:exon
so has part: feature:374941-375051:-1:exon
so has part: feature:374770-374850:-1:exon
so has part: feature:374057-374119:-1:exon
so has part: feature:373889-373955:-1:exon
so has part: feature:372873-372926:-1:exon
so has part: feature:371904-372325:-1:exon

XP_041568193.1
type: Protein
SIO_000068: ncbiprotein

position:371904:-1
position: 371904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:379116-379173:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:378686-378756:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:377050-377156:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:375825-375921:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:374941-375051:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:374770-374850:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:374057-374119:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:373889-373955:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:372873-372926:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:371904-372325:-1:exon

MCM7
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: MCM7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 379588..404448
location: region:379588-404448:1
so has part: feature:379588-404448:1:exon
subclass of: SO_0000010

121468523
type: Gene
SIO_000068: ncbigene

position:379588:1
position: 379588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:404448:1
position: 404448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:379588-404448:1:exon

MCM7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: MCM7
product: minichromosome maintenance complex component 7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041712260.1
SIO_010081: MCM7
subclass of: SO_0000673
so part of: MCM7
location: join(379588..380095,380245..380324,382232..382396,384302..384426,385547..385727,388963..389100,390469..390618,391824..391944,393358..393489,394544..394627,396804..397197,398740..398823,400040..400199,402759..402868,403688..404448)
location: region:379588-404448:1
so has part: feature:379588-380095:1:exon
so has part: feature:380245-380324:1:exon
so has part: feature:382232-382396:1:exon
so has part: feature:384302-384426:1:exon
so has part: feature:385547-385727:1:exon
so has part: feature:388963-389100:1:exon
so has part: feature:390469-390618:1:exon
so has part: feature:391824-391944:1:exon
so has part: feature:393358-393489:1:exon
so has part: feature:394544-394627:1:exon
so has part: feature:396804-397197:1:exon
so has part: feature:398740-398823:1:exon
so has part: feature:400040-400199:1:exon
so has part: feature:402759-402868:1:exon
so has part: feature:403688-404448:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:379588-380095:1:exon

position:380095:1
position: 380095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:380245-380324:1:exon

position:380245:1
position: 380245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:380324:1
position: 380324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:382232-382396:1:exon

position:382232:1
position: 382232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:382396:1
position: 382396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:384302-384426:1:exon

position:384302:1
position: 384302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:384426:1
position: 384426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:385547-385727:1:exon

position:385547:1
position: 385547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:385727:1
position: 385727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:388963-389100:1:exon

position:388963:1
position: 388963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:389100:1
position: 389100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:390469-390618:1:exon

position:390469:1
position: 390469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:390618:1
position: 390618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:391824-391944:1:exon

position:391824:1
position: 391824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:391944:1
position: 391944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:393358-393489:1:exon

position:393358:1
position: 393358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:393489:1
position: 393489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:394544-394627:1:exon

position:394544:1
position: 394544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:394627:1
position: 394627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:396804-397197:1:exon

position:396804:1
position: 396804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:397197:1
position: 397197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:398740-398823:1:exon

position:398740:1
position: 398740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:398823:1
position: 398823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:400040-400199:1:exon

position:400040:1
position: 400040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:400199:1
position: 400199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:402759-402868:1:exon

position:402759:1
position: 402759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:402868:1
position: 402868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:403688-404448:1:exon

position:403688:1
position: 403688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MCM7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: MCM7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA replication licensing factor MCM7
translation: MAPRDYDSEKEKAKRFFQEFYRDGPDGRKEFPYREQLALLARRERVALWVALDDVAEDEPELAEAVVENVRRYGRVFSDAVHELLPQFGSAEAAPRDPLDVYLEHRLLLEQRGRAGGAPRTPQNQYPPELLRRFELYFRAPSCSKPLSPRELRAGSIGALVTVQGIVTRASEVRPLLRVATYSCDQCGAETYQPIEGPTFTPLLLCPSRECQTNRSGGRLYLQSRGSKFTKFQELRIQEHSDQVPVGHLPRSLSLHLSGANTRQAQPGDHVRVTGAFLPLLRPGFRQVTQGLLSETFLEGHHLAKVNKSEEEEGEGAELSPEELQEITGTGEDFYGKLAASIAPEIFGHEDVKKSLLLLLVGGVERSPRGMRIRGNINICLMGDPGVAKSQLLTYIDRLAPRSQYTTGRGSSGVGLTAAVLRDPQSGELALEGGALVLADRGVCCIDEFDKMAEGERVALHEALEQQSVAVAKAGVVASLNARCAVLAAANPALGRYDPRRSLEHNLQLPAALLSRFDLLWLLQDRPQRDRDLRLAQHITYVHQHCREPPSAFRPLDMKLMRRYLCACRRRCPRLPEALGEFLTAAYVELRRERGRGLYTSARTLLAVLRLSTALARLRLGAVVEKDDVTEALRLLEAARDSLRGDSEPVPRCPRPSEAIFGVLRELGGPGGRSVPLPHALEVLGARGFTPAQVSAALAEYEGLDVLQVNPARTRVTFV
SIO_010081: MCM7
subclass of: SO_0000673
so part of: MCM7
location: join(380065..380095,380245..380324,382232..382396,384302..384426,385547..385727,388963..389100,390469..390618,391824..391944,393358..393489,394544..394627,396804..397197,398740..398823,400040..400199,402759..402868,403688..403892)
location: region:380065-403892:1
so has part: feature:380065-380095:1:exon
so has part: feature:380245-380324:1:exon
so has part: feature:382232-382396:1:exon
so has part: feature:384302-384426:1:exon
so has part: feature:385547-385727:1:exon
so has part: feature:388963-389100:1:exon
so has part: feature:390469-390618:1:exon
so has part: feature:391824-391944:1:exon
so has part: feature:393358-393489:1:exon
so has part: feature:394544-394627:1:exon
so has part: feature:396804-397197:1:exon
so has part: feature:398740-398823:1:exon
so has part: feature:400040-400199:1:exon
so has part: feature:402759-402868:1:exon
so has part: feature:403688-403892:1:exon

XP_041568194.1
type: Protein
SIO_000068: ncbiprotein

position:380065:1
position: 380065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:403892:1
position: 403892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:380065-380095:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:380245-380324:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:382232-382396:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:384302-384426:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:385547-385727:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:388963-389100:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:390469-390618:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:391824-391944:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:393358-393489:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:394544-394627:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:396804-397197:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:398740-398823:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:400040-400199:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:402759-402868:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:403688-403892:1:exon

COPS6
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: COPS6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(405477..417467)
location: region:405477-417467:-1
so has part: feature:405477-417467:-1:exon
subclass of: SO_0000010

121468519
type: Gene
SIO_000068: ncbigene

position:405477:-1
position: 405477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:417467:-1
position: 417467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:405477-417467:-1:exon

COPS6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: COPS6
product: COP9 signalosome subunit 6, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_041712254.1
SIO_010081: COPS6
subclass of: SO_0000673
so part of: COPS6
location: complement(join(405477..405523,405868..406028,406861..406961,407862..407954,409730..409844,411179..411226,411354..411416,412260..412348,413939..414070,415948..416073,417326..417467))
location: region:405477-417467:-1
so has part: feature:417326-417467:-1:exon
so has part: feature:415948-416073:-1:exon
so has part: feature:413939-414070:-1:exon
so has part: feature:412260-412348:-1:exon
so has part: feature:411354-411416:-1:exon
so has part: feature:411179-411226:-1:exon
so has part: feature:409730-409844:-1:exon
so has part: feature:407862-407954:-1:exon
so has part: feature:406861-406961:-1:exon
so has part: feature:405868-406028:-1:exon
so has part: feature:405477-405523:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:417326-417467:-1:exon

position:417326:-1
position: 417326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:415948-416073:-1:exon

position:415948:-1
position: 415948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:416073:-1
position: 416073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:413939-414070:-1:exon

position:413939:-1
position: 413939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:414070:-1
position: 414070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:412260-412348:-1:exon

position:412260:-1
position: 412260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:412348:-1
position: 412348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:411354-411416:-1:exon

position:411354:-1
position: 411354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:411416:-1
position: 411416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:411179-411226:-1:exon

position:411179:-1
position: 411179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:411226:-1
position: 411226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:409730-409844:-1:exon

position:409730:-1
position: 409730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:409844:-1
position: 409844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:407862-407954:-1:exon

position:407862:-1
position: 407862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:407954:-1
position: 407954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:406861-406961:-1:exon

position:406861:-1
position: 406861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:406961:-1
position: 406961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:405868-406028:-1:exon

position:405868:-1
position: 405868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:406028:-1
position: 406028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:405477-405523:-1:exon

position:405523:-1
position: 405523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

COPS6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: COPS6
product: COP9 signalosome subunit 6, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_041712253.1
SIO_010081: COPS6
subclass of: SO_0000673
so part of: COPS6
location: complement(join(405548..405701,405868..406028,406861..406961,407862..407954,409730..409844,411179..411226,411354..411416,412260..412348,413939..414070,415948..416073,417326..417467))
location: region:405548-417467:-1
so has part: feature:417326-417467:-1:exon
so has part: feature:415948-416073:-1:exon
so has part: feature:413939-414070:-1:exon
so has part: feature:412260-412348:-1:exon
so has part: feature:411354-411416:-1:exon
so has part: feature:411179-411226:-1:exon
so has part: feature:409730-409844:-1:exon
so has part: feature:407862-407954:-1:exon
so has part: feature:406861-406961:-1:exon
so has part: feature:405868-406028:-1:exon
so has part: feature:405548-405701:-1:exon

position:405548:-1
position: 405548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:417326-417467:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:415948-416073:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:413939-414070:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:412260-412348:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:411354-411416:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:411179-411226:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:409730-409844:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:407862-407954:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:406861-406961:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:405868-406028:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:405548-405701:-1:exon

position:405701:-1
position: 405701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

COPS6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: COPS6
product: COP9 signalosome subunit 6, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_041712252.1
SIO_010081: COPS6
subclass of: SO_0000673
so part of: COPS6
location: complement(join(405548..406028,406861..406961,407862..407954,409730..409844,411179..411226,411354..411416,412260..412348,413939..414070,415948..416073,417326..417467))
location: region:405548-417467:-1
so has part: feature:417326-417467:-1:exon
so has part: feature:415948-416073:-1:exon
so has part: feature:413939-414070:-1:exon
so has part: feature:412260-412348:-1:exon
so has part: feature:411354-411416:-1:exon
so has part: feature:411179-411226:-1:exon
so has part: feature:409730-409844:-1:exon
so has part: feature:407862-407954:-1:exon
so has part: feature:406861-406961:-1:exon
so has part: feature:405548-406028:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:417326-417467:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:415948-416073:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:413939-414070:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:412260-412348:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:411354-411416:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:411179-411226:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:409730-409844:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:407862-407954:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:406861-406961:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:405548-406028:-1:exon

COPS6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: COPS6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: COP9 signalosome complex subunit 6
translation: MAAAAGGGGGGGPGMGTGNGTGTGNGTGNSGGSNGGMEVDGAGTPQVMAGGVTGSVAVALHPLVILNISDHWIRLRSQEGRNGQVIGALIGRQEGRNIEVMNSFELLAHGAGPALLVDKEYYYTKEEQFKQVFKDLEFLGWYTTGGPPEPADIHVHKQVCEIIESPLFLKLNPMTKHTDLPVSVFESVIDIINGEATMLFAELPYTLATEEAERIGVDHVARMTATGGGENSTVAEHLIAQHSAIKMLHSRVRLILEYVRAAEAGEVPFNHEILREACALCHCLPVLSTDKFKTDFYDQCNDVGLMAYLGTITKTCNTMNQFVNKFNVLYDRQGIGRRMRGLFF
SIO_010081: COPS6
subclass of: SO_0000673
so part of: COPS6
location: complement(join(405888..406028,406861..406961,407862..407954,409730..409844,411179..411226,411354..411416,412260..412348,413939..414070,415948..416073,417326..417452))
location: region:405888-417452:-1
so has part: feature:417326-417452:-1:exon
so has part: feature:415948-416073:-1:exon
so has part: feature:413939-414070:-1:exon
so has part: feature:412260-412348:-1:exon
so has part: feature:411354-411416:-1:exon
so has part: feature:411179-411226:-1:exon
so has part: feature:409730-409844:-1:exon
so has part: feature:407862-407954:-1:exon
so has part: feature:406861-406961:-1:exon
so has part: feature:405888-406028:-1:exon

XP_041568186.1
type: Protein
SIO_000068: ncbiprotein

position:405888:-1
position: 405888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:417452:-1
position: 417452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:417326-417452:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:415948-416073:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:413939-414070:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:412260-412348:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:411354-411416:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:411179-411226:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:409730-409844:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:407862-407954:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:406861-406961:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:405888-406028:-1:exon

COPS6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: COPS6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: COP9 signalosome complex subunit 6
translation: MAAAAGGGGGGGPGMGTGNGTGTGNGTGNSGGSNGGMEVDGAGTPQVMAGGVTGSVAVALHPLVILNISDHWIRLRSQEGRNGQVIGALIGRQEGRNIEVMNSFELLAHGAGPALLVDKEYYYTKEEQFKQVFKDLEFLGWYTTGGPPEPADIHVHKQVCEIIESPLFLKLNPMTKHTDLPVSVFESVIDIINGEATMLFAELPYTLATEEAERIGVDHVARMTATGGGENSTVAEHLIAQHSAIKMLHSRVRLILEYVRAAEAGEVPFNHEILREACALCHCLPVLSTDKFKTDFYDQCNDVGLMAYLGTITKTCNTMNQFVNKFNVLYDRQGIGRRMRGLFF
SIO_010081: COPS6
subclass of: SO_0000673
so part of: COPS6
location: complement(join(405888..406028,406861..406961,407862..407954,409730..409844,411179..411226,411354..411416,412260..412348,413939..414070,415948..416073,417326..417452))
location: region:405888-417452:-1
so has part: feature:417326-417452:-1:exon
so has part: feature:415948-416073:-1:exon
so has part: feature:413939-414070:-1:exon
so has part: feature:412260-412348:-1:exon
so has part: feature:411354-411416:-1:exon
so has part: feature:411179-411226:-1:exon
so has part: feature:409730-409844:-1:exon
so has part: feature:407862-407954:-1:exon
so has part: feature:406861-406961:-1:exon
so has part: feature:405888-406028:-1:exon

XP_041568187.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:417326-417452:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:415948-416073:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:413939-414070:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:412260-412348:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:411354-411416:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:411179-411226:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:409730-409844:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:407862-407954:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:406861-406961:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:405888-406028:-1:exon

COPS6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: COPS6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: COP9 signalosome complex subunit 6
translation: MAAAAGGGGGGGPGMGTGNGTGTGNGTGNSGGSNGGMEVDGAGTPQVMAGGVTGSVAVALHPLVILNISDHWIRLRSQEGRNGQVIGALIGRQEGRNIEVMNSFELLAHGAGPALLVDKEYYYTKEEQFKQVFKDLEFLGWYTTGGPPEPADIHVHKQVCEIIESPLFLKLNPMTKHTDLPVSVFESVIDIINGEATMLFAELPYTLATEEAERIGVDHVARMTATGGGENSTVAEHLIAQHSAIKMLHSRVRLILEYVRAAEAGEVPFNHEILREACALCHCLPVLSTDKFKTDFYDQCNDVGLMAYLGTITKTCNTMNQFVNKFNVLYDRQGIGRRMRGLFF
SIO_010081: COPS6
subclass of: SO_0000673
so part of: COPS6
location: complement(join(405888..406028,406861..406961,407862..407954,409730..409844,411179..411226,411354..411416,412260..412348,413939..414070,415948..416073,417326..417452))
location: region:405888-417452:-1
so has part: feature:417326-417452:-1:exon
so has part: feature:415948-416073:-1:exon
so has part: feature:413939-414070:-1:exon
so has part: feature:412260-412348:-1:exon
so has part: feature:411354-411416:-1:exon
so has part: feature:411179-411226:-1:exon
so has part: feature:409730-409844:-1:exon
so has part: feature:407862-407954:-1:exon
so has part: feature:406861-406961:-1:exon
so has part: feature:405888-406028:-1:exon

XP_041568188.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:417326-417452:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:415948-416073:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:413939-414070:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:412260-412348:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:411354-411416:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:411179-411226:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:409730-409844:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:407862-407954:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:406861-406961:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:405888-406028:-1:exon

TRNAT-AGU
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: TRNAT-AGU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(418394..418467)
location: region:418394-418467:-1
so has part: feature:418394-418467:-1:exon
subclass of: SO_0000663

121468567
type: Gene
SIO_000068: ncbigene

position:418394:-1
position: 418394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:418467:-1
position: 418467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:418394-418467:-1:exon

TRNAT-AGU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 59729
gene: TRNAT-AGU
product: tRNA-Thr
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA threonine (anticodon AGU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(418431..418433),aa:Thr,seq:agt)
SIO_010081: TRNAT-AGU
subclass of: SO_0000673
so part of: TRNAT-AGU
location: complement(418394..418467)
location: region:418394-418467:-1
so has part: feature:418394-418467:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:418394-418467:-1:exon

VGF
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: VGF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 424088..428538
location: region:424088-428538:1
so has part: feature:424088-428538:1:exon
subclass of: SO_0000010

115492692
type: Gene
SIO_000068: ncbigene

position:424088:1
position: 424088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:428538:1
position: 428538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:424088-428538:1:exon

VGF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: VGF
product: VGF nerve growth factor inducible
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 50 samples with support for all annotated introns
transcript id: XM_041712250.1
SIO_010081: VGF
subclass of: SO_0000673
so part of: VGF
location: join(424088..424481,426664..427429,427631..428538)
location: region:424088-428538:1
so has part: feature:424088-424481:1:exon
so has part: feature:426664-427429:1:exon
so has part: feature:427631-428538:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:424088-424481:1:exon

position:424481:1
position: 424481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:426664-427429:1:exon

position:426664:1
position: 426664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:427429:1
position: 427429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:427631-428538:1:exon

position:427631:1
position: 427631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

VGF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: VGF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neurosecretory protein VGF
translation: MNGPLTSSETPHVGPRAYKGGGAALSAVLKGETTPRPPRPPPEFPLLTATPPFTSTPPPPPFRDPPLPPPSSPGSTPPRPRFEPPPPPLSRPPPLFLASPHTERRPLPRLEKGGGIPRNSRDPPGAGAMTAPPRPLRSAALLLSITLLVQSRPQPTPQPPRSSPQTPPHPLSKRSPPPPPPPAGGHHQSQVLKELEELGRLRAEAKRDRQRDRERERESGWASSRQLRQQQSLEHRLLERRYQELAESRRQAQAARKAAAEEERLADLASDLLLRYLLRGPGAGVAEDKRSEEEEEEEEVEEGFGENGKDGFGLGGEVNGEIGGYKGKERFGIGDEISDELNDELNDDLGGHQTYNSKDRFDLGNDLNDDLGGHPTYKTKDRFGLRNDLNDDLDGYKAKDRFDLSNDLAGYKGGYDANDANEVFKVNRRFKVKPGTNEDLKANDGDNFKIRGGFDNAADDLNGNGGLEDNEILPARGHRMPARGNRIAAAEEEEDEEEEATTGDSEEVSPQDPAEVDELDPGTIDQLIELSSRLHLPADDVVDIIHDVEQKRKEEAGLGLAMAGMGVVAVEPPPKLGRPPKSRLRPPPEPIPARTFLPVPPRRPPPPLRDRQVEKYLERVLGSPPRG
SIO_010081: VGF
subclass of: SO_0000673
so part of: VGF
location: join(424103..424481,426664..427429,427631..428369)
location: region:424103-428369:1
so has part: feature:424103-424481:1:exon
so has part: feature:426664-427429:1:exon
so has part: feature:427631-428369:1:exon

XP_041568184.1
type: Protein
SIO_000068: ncbiprotein

position:424103:1
position: 424103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:428369:1
position: 428369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:424103-424481:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:426664-427429:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:427631-428369:1:exon

AP1S1
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: AP1S1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(430318..438210)
location: region:430318-438210:-1
so has part: feature:430318-438210:-1:exon
subclass of: SO_0000010

115492730
type: Gene
SIO_000068: ncbigene

position:430318:-1
position: 430318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:438210:-1
position: 438210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:430318-438210:-1:exon

AP1S1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: AP1S1
product: adaptor related protein complex 1 subunit sigma 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs, 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 88 samples with support for all annotated introns
transcript id: XM_041712287.1
SIO_010081: AP1S1
subclass of: SO_0000673
so part of: AP1S1
location: complement(join(430318..430380,431869..432006,433236..433344,435031..435209,438042..438210))
location: region:430318-438210:-1
so has part: feature:438042-438210:-1:exon
so has part: feature:435031-435209:-1:exon
so has part: feature:433236-433344:-1:exon
so has part: feature:431869-432006:-1:exon
so has part: feature:430318-430380:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:438042-438210:-1:exon

position:438042:-1
position: 438042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:435031-435209:-1:exon

position:435031:-1
position: 435031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:435209:-1
position: 435209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:433236-433344:-1:exon

position:433236:-1
position: 433236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:433344:-1
position: 433344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:431869-432006:-1:exon

position:431869:-1
position: 431869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:432006:-1
position: 432006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:430318-430380:-1:exon

position:430380:-1
position: 430380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

AP1S1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: AP1S1
product: adaptor related protein complex 1 subunit sigma 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_041712288.1
SIO_010081: AP1S1
subclass of: SO_0000673
so part of: AP1S1
location: complement(join(430318..430380,431869..432006,433236..433344,435031..435168,435912..435952,438042..438109))
location: region:430318-438109:-1
so has part: feature:438042-438109:-1:exon
so has part: feature:435912-435952:-1:exon
so has part: feature:435031-435168:-1:exon
so has part: feature:433236-433344:-1:exon
so has part: feature:431869-432006:-1:exon
so has part: feature:430318-430380:-1:exon

position:438109:-1
position: 438109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:438042-438109:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:435912-435952:-1:exon

position:435912:-1
position: 435912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:435952:-1
position: 435952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:435031-435168:-1:exon

position:435168:-1
position: 435168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:433236-433344:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:431869-432006:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:430318-430380:-1:exon

AP1S1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: AP1S1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AP-1 complex subunit sigma-1A isoform X1
translation: MMRFMLLFSRQGKLRLQKWYLATADKDKKKMVRELMQVVLARKPKMCSFLEWRDLKVVYKRYASLYFCCAIEGQDNELITLELIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFVMGGEIQDTSKKSVLKAIEQADLLQEEDESPRSVLEEMGLA
SIO_010081: AP1S1
subclass of: SO_0000673
so part of: AP1S1
location: complement(join(430333..430380,431869..432006,433236..433344,435031..435209,438042..438044))
location: region:430333-438044:-1
so has part: feature:438042-438044:-1:exon
so has part: feature:435031-435209:-1:exon
so has part: feature:433236-433344:-1:exon
so has part: feature:431869-432006:-1:exon
so has part: feature:430333-430380:-1:exon

XP_041568221.1
type: Protein
SIO_000068: ncbiprotein

position:430333:-1
position: 430333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:438044:-1
position: 438044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:438042-438044:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:435031-435209:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:433236-433344:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:431869-432006:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:430333-430380:-1:exon

AP1S1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: AP1S1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AP-1 complex subunit sigma-1A isoform X2
translation: MMRFMLLFSRQGKLRLQKWYLATADKDKKKMVRELMQVVLARKPKMCSFLEWRDLKVVYKRYASLYFCCAIEGQDNELITLELIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFVMGGEIQDTSKKSVLKAIEQADLLQEEDESPRSVLEEMGLA
SIO_010081: AP1S1
subclass of: SO_0000673
so part of: AP1S1
location: complement(join(430333..430380,431869..432006,433236..433344,435031..435168,435912..435952,438042..438044))
location: region:430333-438044:-1
so has part: feature:438042-438044:-1:exon
so has part: feature:435912-435952:-1:exon
so has part: feature:435031-435168:-1:exon
so has part: feature:433236-433344:-1:exon
so has part: feature:431869-432006:-1:exon
so has part: feature:430333-430380:-1:exon

XP_041568222.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:438042-438044:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:435912-435952:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:435031-435168:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:433236-433344:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:431869-432006:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:430333-430380:-1:exon

LOC115492624
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC115492624
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 439649..452815
location: region:439649-452815:1
so has part: feature:439649-452815:1:exon
subclass of: SO_0000010

115492624
type: Gene
SIO_000068: ncbigene

position:439649:1
position: 439649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:452815:1
position: 452815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:439649-452815:1:exon

LOC115492624
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC115492624
product: mucin-2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 16 Proteins, and 51% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032745576.2
SIO_010081: LOC115492624
subclass of: SO_0000673
so part of: LOC115492624
location: join(439649..439709,442369..449451,449585..449773,450071..450189,450297..450355,450609..450754,450852..450914,451012..451174,452038..452199,452278..452378,452472..452530,452614..452815)
location: region:439649-452815:1
so has part: feature:439649-439709:1:exon
so has part: feature:442369-449451:1:exon
so has part: feature:449585-449773:1:exon
so has part: feature:450071-450189:1:exon
so has part: feature:450297-450355:1:exon
so has part: feature:450609-450754:1:exon
so has part: feature:450852-450914:1:exon
so has part: feature:451012-451174:1:exon
so has part: feature:452038-452199:1:exon
so has part: feature:452278-452378:1:exon
so has part: feature:452472-452530:1:exon
so has part: feature:452614-452815:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:439649-439709:1:exon

position:439709:1
position: 439709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:442369-449451:1:exon

position:442369:1
position: 442369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:449451:1
position: 449451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:449585-449773:1:exon

position:449585:1
position: 449585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:449773:1
position: 449773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:450071-450189:1:exon

position:450071:1
position: 450071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:450189:1
position: 450189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:450297-450355:1:exon

position:450297:1
position: 450297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:450355:1
position: 450355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:450609-450754:1:exon

position:450609:1
position: 450609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:450754:1
position: 450754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:450852-450914:1:exon

position:450852:1
position: 450852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:450914:1
position: 450914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:451012-451174:1:exon

position:451012:1
position: 451012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:451174:1
position: 451174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:452038-452199:1:exon

position:452038:1
position: 452038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:452199:1
position: 452199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:452278-452378:1:exon

position:452278:1
position: 452278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:452378:1
position: 452378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:452472-452530:1:exon

position:452472:1
position: 452472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:452530:1
position: 452530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:452614-452815:1:exon

position:452614:1
position: 452614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115492624
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC115492624
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mucin-2
translation: MGRLWGGPAALCVCVLLVLTGVTGDTISPAGADPADGSSTVTTSFSDSTTLTSTSPPTHSTTTATLSRTKATPPTTSSSTESSTTSTTTTTPTPSTTTTTTSSSPGSSSTSPTSTTTISTPSSTTSSSTESSTTTTPTPSTTTTTTSSSTESSTTSPTSTVTTTSTLSTTTTSTSSSTASSSTSPTSTTTTTPTLLTTTTSTSSTGSSTTSPTSTVTTTSTPSTTSSSTESSTTSTTTTTPIPSTTTTTSSSSAGSSTTSPTSTATTTPTQSTTTTTSSSTASSTTSPTSTTTTTPTLSTTTTTTSSSPGSSSTSPTSTVTTTSTPSTTSSSTESSTTSTTTTTPIPSTTTTTSSSSAGSSTTSPTSTATTTPTPSTTTTTTSSSTGSSTTSPTSGTPTQSTPSTTSSSSAASSTTSSTSTATTPSILSTTTTTTSSSAGSSTTSPTSTATTTSSPSTTTTTSSSSTVSSSTSPTSTDATTSTPSTTMLTPSSTTTTTISSSTVSSTTSPTSTATSTSSLSTTTTTSTSSTESSTTSPTSTVTTTSTPSTTSSLTTSSSTSPTSTTTTTPTLSTTTTTSSSSTVSSTTSPTSTVTTTTSTPSTTPSSLSTTTTTTTTSSTGSSTTSPTSTATTVSNPSSTTSILSTSTSSPSTTTTTISSTASSSTSPASATTTSTPSSTTSSLSTTTSSPSTTTTSSSFTVSSSTSPTSTATTTSTLSMTTPTPSTTSSRSTVSSSTSPNAATTTPTPSSTTSSSSTMSSSSSPTSTATTTSTLFTTTSNPSSTTTTSSSSTASSSTSLTSATRTQSTPSTTTSASTVSSSTSPTSTATTTSTPSSSSSTVSSGTSPSSTVTTTPTVSTTSTTTSSSTLSSSTSPASTVTTTPTLSSTTTSSSTASSSSSPTSTAATTSTPSTTTGIHSSTTSSPSSTMSTLSTTTPTQSSTTSTPSSTTGTHSSITSSPSTTTSTLSTTTGTPSTTTATQTSITSTSSTTTATPSTTSSSTTVSSGTSPTSTLTTTPTLSTTTTSSTGSSSTSPTSTATTTPTPSSTTTSSTSSSTASSTTSPTSTATTTSSLSTTTPTLPTTTSTTSSTGSSSTSPTSASTTQSTPSTTTSSSTVSSSTSPTTTATTTSSPLTTTSSSSTTSSTTSPTSTATTTATLSTTTSTPSTTSSSSTVSSSTSPTSTSITTSTQSSTTATQSSITSTPSTTTSSLSTTSTSSSTVSTTTSPTSTVTITSSLSTTTPTLPTTTSTSSSTGSSSTSPTSTATTSTPSSTTSSSTVSSSTSPTTTATTTSSPFTTSSSATSSSTSPTSTATTTATPSSTSSSSTVSSGTSPTSTVTTTPTPSTTTSSSSTVSSSTSPTSTATTTSTLSTTTPTSSSSTGSSSTSPTSTVTTTPTLSTTTTSSTVPSSTSPASTVTTTPTLSSTTSSSSTASSSTSPTSTATTTPTPSTTTSSPSTITTSSSSTVSSTTSPTSTATTTSSLSTTTAIPSTTSSSSTVSSSTSPTSTATTTSSLSTTTSTPSTTTSSSSTVSSGTSPTSTAITTPTLSTTTTTSSTGSSSTSPTSVTTTSTPSSTTSSSTVSSSTSPTTTATTTSTPFTTTSSSTTSSSTSPTSTATTTATLSTTTSSPSTTTTTSSSSTGSSITSPTSTATTQSTTSPTSSSSTASSSTSPTSTATTTSSLSTTTTTTSSSSTVSTTTSPTSTATTTPTPSTTSSSSSTASSSTSSTSATPTTSTPSTTTSSSSTVPSSTSPTSTTTTQSTPSTTTATSSTASSNTSPTSTATTTSTLSTTTTTTTSSSTVSSSTSPTSTATTSSLSTTTSTPSTTTPTPSTTSSSSSTVSSSTSSTSATPTTSTPSTTTSSSSTASSGTSPTSTTTTQSTPSTTTTSSSTVSSSTSPTSTPTTTSTLSTTTSSSTVSSGTSPTSTTTTQSTPSTTTTSSSTGFSSTSPTSTATTTSTPSSSTTTTTSSSSTASSSTSPTSTPTTTSTLSTTTSSS…
SIO_010081: LOC115492624
subclass of: SO_0000673
so part of: LOC115492624
location: join(439649..439709,442369..449451,449585..449773,450071..450189,450297..450355,450609..450754,450852..450914,451012..451174,452038..452199,452278..452378,452472..452530,452614..452646)
location: region:439649-452646:1
so has part: feature:439649-439709:1:exon
so has part: feature:442369-449451:1:exon
so has part: feature:449585-449773:1:exon
so has part: feature:450071-450189:1:exon
so has part: feature:450297-450355:1:exon
so has part: feature:450609-450754:1:exon
so has part: feature:450852-450914:1:exon
so has part: feature:451012-451174:1:exon
so has part: feature:452038-452199:1:exon
so has part: feature:452278-452378:1:exon
so has part: feature:452472-452530:1:exon
so has part: feature:452614-452646:1:exon

XP_032601467.2
type: Protein
SIO_000068: ncbiprotein

position:452646:1
position: 452646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:439649-439709:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:442369-449451:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:449585-449773:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:450071-450189:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:450297-450355:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:450609-450754:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:450852-450914:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:451012-451174:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:452038-452199:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:452278-452378:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:452472-452530:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:452614-452646:1:exon

LOC121468538
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121468538
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(466310..468889)
location: region:466310-468889:-1
so has part: feature:466310-468889:-1:exon
subclass of: SO_0000011

121468538
type: Gene
SIO_000068: ncbigene

position:466310:-1
position: 466310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:468889:-1
position: 468889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:466310-468889:-1:exon

LOC121468538
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC121468538
product: uncharacterized LOC121468538
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_005978453.1
SIO_010081: LOC121468538
subclass of: SO_0000673
so part of: LOC121468538
location: complement(join(466310..466590,467244..467302,467411..467505,467654..467833,468568..468730,468826..468889))
location: region:466310-468889:-1
so has part: feature:468826-468889:-1:exon
so has part: feature:468568-468730:-1:exon
so has part: feature:467654-467833:-1:exon
so has part: feature:467411-467505:-1:exon
so has part: feature:467244-467302:-1:exon
so has part: feature:466310-466590:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:468826-468889:-1:exon

position:468826:-1
position: 468826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:468568-468730:-1:exon

position:468568:-1
position: 468568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:468730:-1
position: 468730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:467654-467833:-1:exon

position:467654:-1
position: 467654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:467833:-1
position: 467833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:467411-467505:-1:exon

position:467411:-1
position: 467411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:467505:-1
position: 467505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:467244-467302:-1:exon

position:467244:-1
position: 467244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:467302:-1
position: 467302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:466310-466590:-1:exon

position:466590:-1
position: 466590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121468488
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121468488
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(468961..477210)
location: region:468961-477210:-1
so has part: feature:468961-477210:-1:exon
subclass of: SO_0000010

121468488
type: Gene
SIO_000068: ncbigene

position:468961:-1
position: 468961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:477210:-1
position: 477210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:468961-477210:-1:exon

LOC121468488
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC121468488
product: mucin-5AC-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 79% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041712168.1
SIO_010081: LOC121468488
subclass of: SO_0000673
so part of: LOC121468488
location: complement(join(468961..469105,470385..470443,470926..471041,471122..471229,472457..472834,473266..475425,477005..477210))
location: region:468961-477210:-1
so has part: feature:477005-477210:-1:exon
so has part: feature:473266-475425:-1:exon
so has part: feature:472457-472834:-1:exon
so has part: feature:471122-471229:-1:exon
so has part: feature:470926-471041:-1:exon
so has part: feature:470385-470443:-1:exon
so has part: feature:468961-469105:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:477005-477210:-1:exon

position:477005:-1
position: 477005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:473266-475425:-1:exon

position:473266:-1
position: 473266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:475425:-1
position: 475425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:472457-472834:-1:exon

position:472457:-1
position: 472457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:472834:-1
position: 472834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:471122-471229:-1:exon

position:471122:-1
position: 471122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:471229:-1
position: 471229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:470926-471041:-1:exon

position:470926:-1
position: 470926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:471041:-1
position: 471041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:470385-470443:-1:exon

position:470385:-1
position: 470385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:470443:-1
position: 470443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:468961-469105:-1:exon

position:469105:-1
position: 469105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121468488
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC121468488
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mucin-5AC-like
translation: MELGGSIFIFILLLLFVPSEALPAPCTNGGTAVGSGCVCPPGHSGHRCETPDPTSACHNGGTAVGTSCYCPPGFGGPRCQRRDPTSACHNGATAFGTMCVCPPGFRGDTCQEMEELGPCLNGGILEKGTCRCPTTAWGPRCECTSTGPTTVMEKVYVGDTVGINDTVMVTTAGGGTTEVTTAGGGTMDVASRNITGRPKVGSATRVGRGAVDATTNGGSVGRNVTVTAVGGDTTVTHGVAGTDHDVVTIMERDKAVSATAVTHGMVGTNHDVVTIMERDTEVTTTMVSHGVVGTNHDMVTSMEEDTEVTATTVSHGVVGTDHDVVTIMEEDTEVTSTTAVTHGVDGTDHDVVTITKRDTEVGATMVTHGVDGTDHDVVTIMERDTEVTHGVASTDHDVVTITEGDTEVSATTVTHGVDGTNHDVVTITKRDTEVTATAVTHGMVGTDHDVVTITKRDTEVNAGTDHDVVTITERATRVRGSVPMATTTPMLPARRVRNVTASPTRSHARATTMEGETTAVEGDTAVTRSDLLEGDTTAMDGDTTAMDGDTTVMDGDTEATPMEGDTEATPVATMVSDTRATTVESATVMVPPGHLGSHSRATTRARNTTAVGNNSRATTLRGDTGVTTMEGSTRDVENQTWATTLESDTRATTLESDTRATTLESHTPSTFSVTPAEVTSTPAPPNATNTILDVTEISPNTTKATGALANVSAGTTGDFFSSSTAPTMATICLYLPHGDRPPAVVCRNGGVANRTLCLCPPGYSGPTCETPDPTDLCAGGSTAVGHRCVCPPGRTGPRCATPDPATACRHGGTAVGTECYCPHGFSGPRCEDPRPTTTTPTTRTQRWTGATHRSTRRTTTTTTTVPTTRDPCLNGGFWMGTACLCPPNMDGPRCEFGATTINLTAELGPSVTMMARVTNRDFSEDMRDAASPGHRRFAEEFSRTMDGIYRNVSGYRGINVLSLSRGSVVVNYRVHLRPLPGTASLERRALELLAVANAASQPHNCSTSAGR
SIO_010081: LOC121468488
subclass of: SO_0000673
so part of: LOC121468488
location: complement(join(468961..469105,470385..470443,470926..471041,471122..471229,472457..472834,473266..475425,477005..477074))
location: region:468961-477074:-1
so has part: feature:477005-477074:-1:exon
so has part: feature:473266-475425:-1:exon
so has part: feature:472457-472834:-1:exon
so has part: feature:471122-471229:-1:exon
so has part: feature:470926-471041:-1:exon
so has part: feature:470385-470443:-1:exon
so has part: feature:468961-469105:-1:exon

XP_041568102.1
type: Protein
SIO_000068: ncbiprotein

position:477074:-1
position: 477074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:477005-477074:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:473266-475425:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:472457-472834:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:471122-471229:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:470926-471041:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:470385-470443:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:468961-469105:-1:exon

LOC115492621
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC115492621
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(482295..494118)
location: region:482295-494118:-1
so has part: feature:482295-494118:-1:exon
subclass of: SO_0000010

115492621
type: Gene
SIO_000068: ncbigene

position:482295:-1
position: 482295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:494118:-1
position: 494118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:482295-494118:-1:exon

LOC115492621
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC115492621
product: mucin-2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 71% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041712169.1
SIO_010081: LOC115492621
subclass of: SO_0000673
so part of: LOC115492621
location: complement(join(482295..482333,483338..483539,485094..485252,486127..486289,487484..487552,487661..487809,487904..487962,488044..488171,488978..489085,489171..494118))
location: region:482295-494118:-1
so has part: feature:489171-494118:-1:exon
so has part: feature:488978-489085:-1:exon
so has part: feature:488044-488171:-1:exon
so has part: feature:487904-487962:-1:exon
so has part: feature:487661-487809:-1:exon
so has part: feature:487484-487552:-1:exon
so has part: feature:486127-486289:-1:exon
so has part: feature:485094-485252:-1:exon
so has part: feature:483338-483539:-1:exon
so has part: feature:482295-482333:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:489171-494118:-1:exon

position:489171:-1
position: 489171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:488978-489085:-1:exon

position:488978:-1
position: 488978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:489085:-1
position: 489085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:488044-488171:-1:exon

position:488044:-1
position: 488044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:488171:-1
position: 488171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:487904-487962:-1:exon

position:487904:-1
position: 487904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:487962:-1
position: 487962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:487661-487809:-1:exon

position:487661:-1
position: 487661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:487809:-1
position: 487809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:487484-487552:-1:exon

position:487484:-1
position: 487484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:487552:-1
position: 487552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:486127-486289:-1:exon

position:486127:-1
position: 486127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:486289:-1
position: 486289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:485094-485252:-1:exon

position:485094:-1
position: 485094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:485252:-1
position: 485252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:483338-483539:-1:exon

position:483338:-1
position: 483338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:483539:-1
position: 483539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:482295-482333:-1:exon

position:482333:-1
position: 482333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115492621
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC115492621
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mucin-2-like
translation: MKGSGGQEGLDESKARRRIEEEEEEEEEEGEGWGVHPGRALGVSAHPGPAPAAAIVGTTRVQGTSTAPSVTATTFSETTETFSGTTETTSETTKATSGTTETISGTTETTSGTTKTTSGTTETFSGTTETTSGTSKTSSETTMASSETSTTSPETTSTSETTMTIPETTTTTSWTTTTTPATSSTDRTSRSTPELTPGSSWTSTMTTGSSMSTSETSTASSETTSTSETTTTTPATTSSTSGTSTTTPGSTMSTSGTNPTTSSPTSSTSETTMTISETTTSTPGTKTTILGTTTTTPEATMTPTGTMTTSETTTTIPWTTSSTSETTTTPVTTSSTSGTFTTTPRTTTTTSGTSSTDRTSTSTPELTPSSSWTSTTPPGSSMSTTETATTTPVTTSSTSETTTTSSGTSMTSSGTTTTSSGTTTASETTTTTPVTTSSTSGTSTTTPGSTMSTSGTNPTTSSPTSSTSETTMTSSGTSTTIPETTTSTPGTKTTIPGTTMTIPAATTTTPRTMTTSATTTTTPESAPTTSRTTLTTSATTTTTSGTTMTTLATTSSTPWITTTTPGTTTTTPVTTTTNSGTTTTIPSSTTTAPGTTTTTPVTTTTNSGTTTTIPATSTTTSGTTMTIPSSTTAIPGTTTITPGTTSFTPVTTPTIPGTTTTTPGTTTTISRTTTTPATSTTTSGTSTTTPGTTTTNSGTTTTIPGTTTATPWTTMTTPAISTTSSGTTTTTPGTTTTNSGTTTTVPGTTTTTPVTTTTNSGTTSSTPLTTTTTPGTSTPISGTTTTTPETTTTISGTTMANSGTTTTVPGTTTTTPVTTTTTPGTTTTIPGTTTATPWTTMTTPATSTSSSGTTTTPATSTTTSGTTMTIPSSTTTIPGTTSSTPWTTTTNSGTTTRVPGTTTTISGTTMTNSGTTSTIPGTTTTTPGTATTIPGTTTTIPGTTMTTPMTTTIPATSTTTSGTTTTIPGTSTITPGTSTITPGTTTTNSGTTTTVPETTTTTPGTTTTPAISTTTSGTTTTIPWISTTISGTTTTNSGTTTTVPGTTTTTPGTTTTTPGTTTTIPGTTTTNSGTTMTNSGTTTTIPGTTTSTPGTSTTTPGSTSSTPGTTTTNSGTTTKVPGTTTTTPGTATTIPGTTTTTPGTSTTISWTTTTNSGTTTTVPGSTTTTPGTTTTTPGTTTTISGTTMTTPVTTTTPTISTTTSGTTTTIPSSTTTTPETTMTTPWTSTTISGTTTTIPGTTSSTPETTTTTSGTSITTPGTTTAFPGTTTTNSGTTTTVPGTTTTTPWTTMTTPAITTTSSGTTTTTSGTTTTTPGTTSSTPLTTTTIPGTTTTTPGTTTTTSGTTTTIPSSTTTTSGTTSSTPWTTTTTPGTTTTISGTTTTTPGTTTTTSGTTTTTSGTSTTTLGTTTTTPGTSTTTSGTTTTIPSSTTTTTATTTTIPGTTTTIPGTTTTIPGTTTTISGTTTTTLGTTTTISGTSTTTSGTTTTISGTTTATPGTTTTISGTTTTTSGTTTTIPATSTTTSGTTTTIPSSTTTTSGTSTITSGTSTTISGTTTTNSGTTMTNSGTTTTIPGTTTTISGTTTTTSGTTSSISGTTTTTSVTSTTAPRTSTAMSTTSGTTTTTSGTSTTTPGTTPTTLWTTAGPPPGLCENGGTSTGAGCLCSPSYAGPRCEFSTDTVETNLPFPGTIMTTLDMEVTVTNFNYSKDLEDPTSETFLFFQNHFRQEIKKIYGTIPGYEGVEITSLKSGSIVVGHQVFFTMAQSSNTTEKFQETTEELVENLQEVVDSQGNCQHNTSVLCLVLRGDPVVSGMREVLDLDELCHQRAPPGYGDFFSASISSGVLHCVTSCTPNRPQSLECHHGRCQVTREGPRCFCPDQELYWYAGAQCSGRVSKVATGLGLVVALLFLLCLVLLVVLICHRHRRHRSDLPPHFGGSWYELDDFTWSPAGGAVIPNPGVAPPHPPPGHPEIWGRPPGPPPGTFRPSLERVDPFLQLRTPR…
SIO_010081: LOC115492621
subclass of: SO_0000673
so part of: LOC115492621
location: complement(join(482295..482333,483338..483539,485094..485252,486127..486289,487484..487552,487661..487809,487904..487962,488044..488171,488978..489085,489171..494118))
location: region:482295-494118:-1
so has part: feature:489171-494118:-1:exon
so has part: feature:488978-489085:-1:exon
so has part: feature:488044-488171:-1:exon
so has part: feature:487904-487962:-1:exon
so has part: feature:487661-487809:-1:exon
so has part: feature:487484-487552:-1:exon
so has part: feature:486127-486289:-1:exon
so has part: feature:485094-485252:-1:exon
so has part: feature:483338-483539:-1:exon
so has part: feature:482295-482333:-1:exon

XP_041568103.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:489171-494118:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:488978-489085:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:488044-488171:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:487904-487962:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:487661-487809:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:487484-487552:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:486127-486289:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:485094-485252:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:483338-483539:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:482295-482333:-1:exon

ACHE
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: ACHE
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 497668..507577
location: region:497668-507577:1
so has part: feature:497668-507577:1:exon
subclass of: SO_0000010

115492695
type: Gene
SIO_000068: ncbigene

position:497668:1
position: 497668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:507577:1
position: 507577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:497668-507577:1:exon

ACHE
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: ACHE
product: acetylcholinesterase (Cartwright blood group), transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, 30 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041712202.1
SIO_010081: ACHE
subclass of: SO_0000673
so part of: ACHE
location: join(497668..497729,500815..502378,503548..503714,505914..506055,507447..507577)
location: region:497668-507577:1
so has part: feature:497668-497729:1:exon
so has part: feature:500815-502378:1:exon
so has part: feature:503548-503714:1:exon
so has part: feature:505914-506055:1:exon
so has part: feature:507447-507577:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:497668-497729:1:exon

position:497729:1
position: 497729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:500815-502378:1:exon

position:500815:1
position: 500815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:502378:1
position: 502378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:503548-503714:1:exon

position:503548:1
position: 503548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:503714:1
position: 503714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:505914-506055:1:exon

position:505914:1
position: 505914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:506055:1
position: 506055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:507447-507577:1:exon

position:507447:1
position: 507447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ACHE
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: ACHE
product: acetylcholinesterase (Cartwright blood group), transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_041712203.1
SIO_010081: ACHE
subclass of: SO_0000673
so part of: ACHE
location: join(497668..497729,500815..502378,503548..503714,505216..505343)
location: region:497668-505343:1
so has part: feature:497668-497729:1:exon
so has part: feature:500815-502378:1:exon
so has part: feature:503548-503714:1:exon
so has part: feature:505216-505343:1:exon

position:505343:1
position: 505343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:497668-497729:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:500815-502378:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:503548-503714:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:505216-505343:1:exon

position:505216:1
position: 505216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ACHE
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: ACHE
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: acetylcholinesterase isoform X1
translation: MGGRPSPPPPAPLPLFLPLLLLLLVAPCPATPEDLLVTTSAGAVRGFHVPAGPSARVAAFLGIPYAEPPLGPLRFAPPRPARPWGGVLDALSHPHACFQPVDTMFPGFGGSEMWNPNREMSEDCLYLNIWAPTPRPKTPAPVLVWIYGGGFYSGAASLDVYDGRFLAAAEEVLVVSMNYRVGALGFLALPGHPEAPGNVGLMDQRLALRWVQANIAAFGGDPGAVTLFGESAGAASVGLHLLSGGSRALFRRAVLQSGSPNGPWATVGAAEGRRRAARLGRLLGCGGAGAGGAVTNETELLVCLRAAAPPQLVEHEAAVLPQQGVFRFAFVPVVDGEFLADTPEALLGAPGGAEAEVLLGAVQDEGTYFLVYGVPGFGKDNESLISREEFLGGVRLGVPQANELAAEAVVLQYTDWLDQDNPVKNREALDDIVGDHNVVCPLMHFAQRWAERGGTVFAYLFDHRASNLLWPPWMGVPHGYEIEFVFGQPLNPGLNYTAEEEALSRRIMRYWGNFARTGDPNEASERERRWPSYTAARQSYARLNARPLAVAQGLRAQACAFWNRFLPKLLNVTGPMEEAERQWRLEFHRWSSYMMRWKSQFELYSRQERCQPL
SIO_010081: ACHE
subclass of: SO_0000673
so part of: ACHE
location: join(500826..502378,503548..503714,505914..506035)
location: region:500826-506035:1
so has part: feature:500826-502378:1:exon
so has part: feature:503548-503714:1:exon
so has part: feature:505914-506035:1:exon

XP_041568136.1
type: Protein
SIO_000068: ncbiprotein

position:500826:1
position: 500826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:506035:1
position: 506035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:500826-502378:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:503548-503714:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:505914-506035:1:exon

ACHE
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: ACHE
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: acetylcholinesterase isoform X2
translation: MGGRPSPPPPAPLPLFLPLLLLLLVAPCPATPEDLLVTTSAGAVRGFHVPAGPSARVAAFLGIPYAEPPLGPLRFAPPRPARPWGGVLDALSHPHACFQPVDTMFPGFGGSEMWNPNREMSEDCLYLNIWAPTPRPKTPAPVLVWIYGGGFYSGAASLDVYDGRFLAAAEEVLVVSMNYRVGALGFLALPGHPEAPGNVGLMDQRLALRWVQANIAAFGGDPGAVTLFGESAGAASVGLHLLSGGSRALFRRAVLQSGSPNGPWATVGAAEGRRRAARLGRLLGCGGAGAGGAVTNETELLVCLRAAAPPQLVEHEAAVLPQQGVFRFAFVPVVDGEFLADTPEALLGAPGGAEAEVLLGAVQDEGTYFLVYGVPGFGKDNESLISREEFLGGVRLGVPQANELAAEAVVLQYTDWLDQDNPVKNREALDDIVGDHNVVCPLMHFAQRWAERGGTVFAYLFDHRASNLLWPPWMGVPHGYEIEFVFGQPLNPGLNYTAEEEALSRRIMRYWGNFARTGDPNEASERERRWPSYTAARQSYARLNARPLAVAQGLRAQACAFWNRFLPKLLNVTGPMEEAEWQHREFWVDLGSFWVKFDLGDFGAVQGVFG
SIO_010081: ACHE
subclass of: SO_0000673
so part of: ACHE
location: join(500826..502378,503548..503714,505216..505328)
location: region:500826-505328:1
so has part: feature:500826-502378:1:exon
so has part: feature:503548-503714:1:exon
so has part: feature:505216-505328:1:exon

XP_041568137.1
type: Protein
SIO_000068: ncbiprotein

position:505328:1
position: 505328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:500826-502378:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:503548-503714:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:505216-505328:1:exon

LOC116807655
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC116807655
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(506844..507265)
location: region:506844-507265:-1
so has part: feature:506844-507265:-1:exon
subclass of: SO_0000011

116807655
type: Gene
SIO_000068: ncbigene

position:506844:-1
position: 506844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:507265:-1
position: 507265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:506844-507265:-1:exon

LOC116807655
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC116807655
product: uncharacterized LOC116807655
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 86% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XR_005978437.1
SIO_010081: LOC116807655
subclass of: SO_0000673
so part of: LOC116807655
location: complement(join(506844..506942,507027..507265))
location: region:506844-507265:-1
so has part: feature:507027-507265:-1:exon
so has part: feature:506844-506942:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:507027-507265:-1:exon

position:507027:-1
position: 507027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:506844-506942:-1:exon

position:506942:-1
position: 506942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

C32H17orf49
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: C32H17orf49
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(507665..513541)
location: region:507665-513541:-1
so has part: feature:507665-513541:-1:exon
subclass of: SO_0000010

121468506
type: Gene
SIO_000068: ncbigene

position:507665:-1
position: 507665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:513541:-1
position: 513541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:507665-513541:-1:exon

C32H17orf49
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: C32H17orf49
product: chromosome 32 C17orf49 homolog, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 150 samples with support for all annotated introns
transcript id: XM_041712207.1
SIO_010081: C32H17orf49
subclass of: SO_0000673
so part of: C32H17orf49
location: complement(join(507665..507912,508013..508105,508950..509119,509210..509311,511244..511338,513415..513541))
location: region:507665-513541:-1
so has part: feature:513415-513541:-1:exon
so has part: feature:511244-511338:-1:exon
so has part: feature:509210-509311:-1:exon
so has part: feature:508950-509119:-1:exon
so has part: feature:508013-508105:-1:exon
so has part: feature:507665-507912:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:513415-513541:-1:exon

position:513415:-1
position: 513415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:511244-511338:-1:exon

position:511244:-1
position: 511244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:511338:-1
position: 511338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:509210-509311:-1:exon

position:509210:-1
position: 509210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:509311:-1
position: 509311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:508950-509119:-1:exon

position:508950:-1
position: 508950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:509119:-1
position: 509119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:508013-508105:-1:exon

position:508013:-1
position: 508013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:508105:-1
position: 508105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:507665-507912:-1:exon

position:507912:-1
position: 507912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

C32H17orf49
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: C32H17orf49
product: chromosome 32 C17orf49 homolog, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 151 samples with support for all annotated introns
transcript id: XM_041712205.1
SIO_010081: C32H17orf49
subclass of: SO_0000673
so part of: C32H17orf49
location: complement(join(507883..507915,508013..508105,508950..509119,509210..509311,511244..511338,513415..513541))
location: region:507883-513541:-1
so has part: feature:513415-513541:-1:exon
so has part: feature:511244-511338:-1:exon
so has part: feature:509210-509311:-1:exon
so has part: feature:508950-509119:-1:exon
so has part: feature:508013-508105:-1:exon
so has part: feature:507883-507915:-1:exon

position:507883:-1
position: 507883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:513415-513541:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:511244-511338:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:509210-509311:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:508950-509119:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:508013-508105:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:507883-507915:-1:exon

position:507915:-1
position: 507915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

C32H17orf49
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: C32H17orf49
product: chromosome 32 C17orf49 homolog, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_041712208.1
SIO_010081: C32H17orf49
subclass of: SO_0000673
so part of: C32H17orf49
location: complement(join(507883..507915,508013..508105,508950..509119,511244..511338,513237..513275))
location: region:507883-513275:-1
so has part: feature:513237-513275:-1:exon
so has part: feature:511244-511338:-1:exon
so has part: feature:508950-509119:-1:exon
so has part: feature:508013-508105:-1:exon
so has part: feature:507883-507915:-1:exon

position:513275:-1
position: 513275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:513237-513275:-1:exon

position:513237:-1
position: 513237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:511244-511338:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:508950-509119:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:508013-508105:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:507883-507915:-1:exon

C32H17orf49
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: C32H17orf49
product: chromosome 32 C17orf49 homolog, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_041712206.1
SIO_010081: C32H17orf49
subclass of: SO_0000673
so part of: C32H17orf49
location: complement(join(507883..507912,508013..508105,508950..509119,509210..509311,511244..511338,513237..513275))
location: region:507883-513275:-1
so has part: feature:513237-513275:-1:exon
so has part: feature:511244-511338:-1:exon
so has part: feature:509210-509311:-1:exon
so has part: feature:508950-509119:-1:exon
so has part: feature:508013-508105:-1:exon
so has part: feature:507883-507912:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:513237-513275:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:511244-511338:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:509210-509311:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:508950-509119:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:508013-508105:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:507883-507912:-1:exon

C32H17orf49
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: C32H17orf49
product: chromosome 32 C17orf49 homolog, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_041712204.1
SIO_010081: C32H17orf49
subclass of: SO_0000673
so part of: C32H17orf49
location: complement(join(507883..507915,508013..508105,508950..509119,509210..509311,511244..511338,513237..513275))
location: region:507883-513275:-1
so has part: feature:513237-513275:-1:exon
so has part: feature:511244-511338:-1:exon
so has part: feature:509210-509311:-1:exon
so has part: feature:508950-509119:-1:exon
so has part: feature:508013-508105:-1:exon
so has part: feature:507883-507915:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:513237-513275:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:511244-511338:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:509210-509311:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:508950-509119:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:508013-508105:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:507883-507915:-1:exon

C32H17orf49
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: C32H17orf49
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromatin complexes subunit BAP18 isoform X4
translation: MTSASTKVGEIFSAAGAAFSRLGELTMQLHPGTDSSPAGSRWTEPELALLRGAVSRFGEDLNRLSALIKDRTVAQLKAAAKRKAYEDSGVPLPPPAADSPKKGPRKNPLSSGGAPHDPPGPPSKKMKAAEPPPSDSDPPGDLVDVEGFGDPPPKKLNFDQA
SIO_010081: C32H17orf49
subclass of: SO_0000673
so part of: C32H17orf49
location: complement(join(507908..507912,508013..508105,508950..509119,509210..509311,511244..511338,513415..513435))
location: region:507908-513435:-1
so has part: feature:513415-513435:-1:exon
so has part: feature:511244-511338:-1:exon
so has part: feature:509210-509311:-1:exon
so has part: feature:508950-509119:-1:exon
so has part: feature:508013-508105:-1:exon
so has part: feature:507908-507912:-1:exon

XP_041568141.1
type: Protein
SIO_000068: ncbiprotein

position:507908:-1
position: 507908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:513435:-1
position: 513435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:513415-513435:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:511244-511338:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:509210-509311:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:508950-509119:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:508013-508105:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:507908-507912:-1:exon

C32H17orf49
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: C32H17orf49
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromatin complexes subunit BAP18 isoform X2
translation: MTSASTKVGEIFSAAGAAFSRLGELTMQLHPGTDSSPAGSRWTEPELALLRGAVSRFGEDLNRLSALIKDRTVAQLKAAAKRKAYEDSGVPLPPPAADSPKKGPRKNPLSSGGAPHDPPGPPSKKMKAAEPPPSDSDPPGDLVDVEGFGDPPPKKLNFDQAA
SIO_010081: C32H17orf49
subclass of: SO_0000673
so part of: C32H17orf49
location: complement(join(507908..507915,508013..508105,508950..509119,509210..509311,511244..511338,513415..513435))
location: region:507908-513435:-1
so has part: feature:513415-513435:-1:exon
so has part: feature:511244-511338:-1:exon
so has part: feature:509210-509311:-1:exon
so has part: feature:508950-509119:-1:exon
so has part: feature:508013-508105:-1:exon
so has part: feature:507908-507915:-1:exon

XP_041568139.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:513415-513435:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:511244-511338:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:509210-509311:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:508950-509119:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:508013-508105:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:507908-507915:-1:exon

C32H17orf49
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: C32H17orf49
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromatin complexes subunit BAP18 isoform X5
translation: MTPMEGSGVGEIFSAAGAAFSRLGELTMQLHPGTDSSPAGAQLKAAAKRKAYEDSGVPLPPPAADSPKKGPRKNPLSSGGAPHDPPGPPSKKMKAAEPPPSDSDPPGDLVDVEGFGDPPPKKLNFDQAA
SIO_010081: C32H17orf49
subclass of: SO_0000673
so part of: C32H17orf49
location: complement(join(507908..507915,508013..508105,508950..509119,511244..511338,513237..513260))
location: region:507908-513260:-1
so has part: feature:513237-513260:-1:exon
so has part: feature:511244-511338:-1:exon
so has part: feature:508950-509119:-1:exon
so has part: feature:508013-508105:-1:exon
so has part: feature:507908-507915:-1:exon

XP_041568142.1
type: Protein
SIO_000068: ncbiprotein

position:513260:-1
position: 513260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:513237-513260:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:511244-511338:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:508950-509119:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:508013-508105:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:507908-507915:-1:exon

C32H17orf49
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: C32H17orf49
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromatin complexes subunit BAP18 isoform X3
translation: MTPMEGSGVGEIFSAAGAAFSRLGELTMQLHPGTDSSPAGSRWTEPELALLRGAVSRFGEDLNRLSALIKDRTVAQLKAAAKRKAYEDSGVPLPPPAADSPKKGPRKNPLSSGGAPHDPPGPPSKKMKAAEPPPSDSDPPGDLVDVEGFGDPPPKKLNFDQA
SIO_010081: C32H17orf49
subclass of: SO_0000673
so part of: C32H17orf49
location: complement(join(507908..507912,508013..508105,508950..509119,509210..509311,511244..511338,513237..513260))
location: region:507908-513260:-1
so has part: feature:513237-513260:-1:exon
so has part: feature:511244-511338:-1:exon
so has part: feature:509210-509311:-1:exon
so has part: feature:508950-509119:-1:exon
so has part: feature:508013-508105:-1:exon
so has part: feature:507908-507912:-1:exon

XP_041568140.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:513237-513260:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:511244-511338:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:509210-509311:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:508950-509119:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:508013-508105:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:507908-507912:-1:exon

C32H17orf49
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: C32H17orf49
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromatin complexes subunit BAP18 isoform X1
translation: MTPMEGSGVGEIFSAAGAAFSRLGELTMQLHPGTDSSPAGSRWTEPELALLRGAVSRFGEDLNRLSALIKDRTVAQLKAAAKRKAYEDSGVPLPPPAADSPKKGPRKNPLSSGGAPHDPPGPPSKKMKAAEPPPSDSDPPGDLVDVEGFGDPPPKKLNFDQAA
SIO_010081: C32H17orf49
subclass of: SO_0000673
so part of: C32H17orf49
location: complement(join(507908..507915,508013..508105,508950..509119,509210..509311,511244..511338,513237..513260))
location: region:507908-513260:-1
so has part: feature:513237-513260:-1:exon
so has part: feature:511244-511338:-1:exon
so has part: feature:509210-509311:-1:exon
so has part: feature:508950-509119:-1:exon
so has part: feature:508013-508105:-1:exon
so has part: feature:507908-507915:-1:exon

XP_041568138.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:513237-513260:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:511244-511338:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:509210-509311:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:508950-509119:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:508013-508105:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:507908-507915:-1:exon

RNASEK
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: RNASEK
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(513745..517006)
location: region:513745-517006:-1
so has part: feature:513745-517006:-1:exon
subclass of: SO_0000010

121468507
type: Gene
SIO_000068: ncbigene

position:513745:-1
position: 513745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:517006:-1
position: 517006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:513745-517006:-1:exon

RNASEK
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: RNASEK
product: ribonuclease K
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 27 ESTs, 3 long SRA reads, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 168 samples with support for all annotated introns
transcript id: XM_041712209.1
SIO_010081: RNASEK
subclass of: SO_0000673
so part of: RNASEK
location: complement(join(513745..514032,514967..515046,516763..517006))
location: region:513745-517006:-1
so has part: feature:516763-517006:-1:exon
so has part: feature:514967-515046:-1:exon
so has part: feature:513745-514032:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:516763-517006:-1:exon

position:516763:-1
position: 516763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:514967-515046:-1:exon

position:514967:-1
position: 514967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:515046:-1
position: 515046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:513745-514032:-1:exon

position:514032:-1
position: 514032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RNASEK
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: RNASEK
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ribonuclease kappa
translation: MVSLLCCGPKMAACGLVLSAWGVVMLVLLGIFFNVHSAVLIEDVPFTEEDFKGGPERIYRLYEQVSYNCFIAAGLYALLGGFSLFQSRLNKRKEYMVR
SIO_010081: RNASEK
subclass of: SO_0000673
so part of: RNASEK
location: complement(join(513894..514032,514967..515046,516763..516840))
location: region:513894-516840:-1
so has part: feature:516763-516840:-1:exon
so has part: feature:514967-515046:-1:exon
so has part: feature:513894-514032:-1:exon

XP_041568143.1
type: Protein
SIO_000068: ncbiprotein

position:513894:-1
position: 513894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:516840:-1
position: 516840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:516763-516840:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:514967-515046:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:513894-514032:-1:exon

LOC121468535
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121468535
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 518556..531926
location: region:518556-531926:1
so has part: feature:518556-531926:1:exon
subclass of: SO_0000010

121468535
type: Gene
SIO_000068: ncbigene

position:518556:1
position: 518556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:531926:1
position: 531926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:518556-531926:1:exon

LOC121468535
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC121468535
product: solute carrier family 2, facilitated glucose transporter member 4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 44 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_041712297.1
SIO_010081: LOC121468535
subclass of: SO_0000673
so part of: LOC121468535
location: join(518556..519522,522090..522233,523361..523521,523902..524026,524137..524252,525634..525793,526605..526786,528307..528411,529119..529214,529693..529896,530972..531926)
location: region:518556-531926:1
so has part: feature:518556-519522:1:exon
so has part: feature:522090-522233:1:exon
so has part: feature:523361-523521:1:exon
so has part: feature:523902-524026:1:exon
so has part: feature:524137-524252:1:exon
so has part: feature:525634-525793:1:exon
so has part: feature:526605-526786:1:exon
so has part: feature:528307-528411:1:exon
so has part: feature:529119-529214:1:exon
so has part: feature:529693-529896:1:exon
so has part: feature:530972-531926:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:518556-519522:1:exon

position:519522:1
position: 519522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:522090-522233:1:exon

position:522090:1
position: 522090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:522233:1
position: 522233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:523361-523521:1:exon

position:523361:1
position: 523361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:523521:1
position: 523521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:523902-524026:1:exon

position:523902:1
position: 523902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:524026:1
position: 524026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:524137-524252:1:exon

position:524137:1
position: 524137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:524252:1
position: 524252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:525634-525793:1:exon

position:525634:1
position: 525634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:525793:1
position: 525793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:526605-526786:1:exon

position:526605:1
position: 526605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:526786:1
position: 526786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:528307-528411:1:exon

position:528307:1
position: 528307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:528411:1
position: 528411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:529119-529214:1:exon

position:529119:1
position: 529119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:529214:1
position: 529214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:529693-529896:1:exon

position:529693:1
position: 529693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:529896:1
position: 529896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:530972-531926:1:exon

position:530972:1
position: 530972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121468535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC121468535
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 2, facilitated glucose transporter member 4-like
translation: MPRGFQQIQEEEEEDEGGPAAAPGGSPPPALTPALALTVFAAALGSLGFGFNIGVINAPQKLLEGEYNATWAQRWGSPPPPQTLSLLWALSVAIFSVGGMGTALAGGAVAERLGRKGALLASNGLAVVGGALMGGAKLGPTYILIILGRFIVGAYSGLVSVLVPLYVGEVAPLRLRGALGTLHQLGIVIGILVAQVLGLRALLGTPRAWPALFGAGLLPAALQLLLLPLCPESPRFLLARGQRGRARRGLSRLAGPAAEAGLAALEAELGRGPAPKVGLLELCRSRRYRQPLIVTLGLQLAQQLSGINAIFYYSTSIFEGAGLQDPAVGTIGTGVVNVAATALSVVLVERAGRRVLQLLGLLGMMGCATTLALALKLGGPFWGAVALASALAFVGFFAVGPGPLPWFVGAELFPPGPRAAALGLAGLLNWASNTAVAMAFPAMQAALGPLVFLLFGALLGGFSLFTFLLLPETRGRPFPAPPRAPKFRPPGAPREGHGAAEPGRPPRALNWGGPQKFGAFWGGFGAPRPKFGGFFENFAQNLEFFKAFLGANQHFGEFQVDFGGHPKNLGGFGAVLGLPAQNLGFFWSDSPKIWYF
SIO_010081: LOC121468535
subclass of: SO_0000673
so part of: LOC121468535
location: join(519484..519522,522090..522233,523361..523521,523902..524026,524137..524252,525634..525793,526605..526786,528307..528411,529119..529214,529693..529896,530972..531430)
location: region:519484-531430:1
so has part: feature:519484-519522:1:exon
so has part: feature:522090-522233:1:exon
so has part: feature:523361-523521:1:exon
so has part: feature:523902-524026:1:exon
so has part: feature:524137-524252:1:exon
so has part: feature:525634-525793:1:exon
so has part: feature:526605-526786:1:exon
so has part: feature:528307-528411:1:exon
so has part: feature:529119-529214:1:exon
so has part: feature:529693-529896:1:exon
so has part: feature:530972-531430:1:exon

XP_041568231.1
type: Protein
SIO_000068: ncbiprotein

position:519484:1
position: 519484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:531430:1
position: 531430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:519484-519522:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:522090-522233:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:523361-523521:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:523902-524026:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:524137-524252:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:525634-525793:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:526605-526786:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:528307-528411:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:529119-529214:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:529693-529896:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:530972-531430:1:exon

EIF5A
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: EIF5A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 534269..544106
location: region:534269-544106:1
so has part: feature:534269-544106:1:exon
subclass of: SO_0000010

121468528
type: Gene
SIO_000068: ncbigene

position:534269:1
position: 534269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:544106:1
position: 544106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:534269-544106:1:exon

EIF5A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: EIF5A
product: eukaryotic translation initiation factor 5A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 3 ESTs, 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 63 samples with support for all annotated introns
transcript id: XM_041712272.1
SIO_010081: EIF5A
subclass of: SO_0000673
so part of: EIF5A
location: join(534269..534402,537571..537742,540888..540992,541872..542003,542804..542871,543750..543777,544027..544106)
location: region:534269-544106:1
so has part: feature:534269-534402:1:exon
so has part: feature:537571-537742:1:exon
so has part: feature:540888-540992:1:exon
so has part: feature:541872-542003:1:exon
so has part: feature:542804-542871:1:exon
so has part: feature:543750-543777:1:exon
so has part: feature:544027-544106:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:534269-534402:1:exon

position:534402:1
position: 534402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:537571-537742:1:exon

position:537571:1
position: 537571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:537742:1
position: 537742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:540888-540992:1:exon

position:540888:1
position: 540888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:540992:1
position: 540992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:541872-542003:1:exon

position:541872:1
position: 541872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:542003:1
position: 542003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:542804-542871:1:exon

position:542804:1
position: 542804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:542871:1
position: 542871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:543750-543777:1:exon

position:543750:1
position: 543750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:543777:1
position: 543777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:544027-544106:1:exon

position:544027:1
position: 544027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

EIF5A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: EIF5A
product: eukaryotic translation initiation factor 5A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 3 ESTs, 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 83 samples with support for all annotated introns
transcript id: XM_041712273.1
SIO_010081: EIF5A
subclass of: SO_0000673
so part of: EIF5A
location: join(534269..534402,537571..537742,540888..540992,541872..542003,542804..542871,543750..543777,544030..544106)
location: region:534269-544106:1
so has part: feature:534269-534402:1:exon
so has part: feature:537571-537742:1:exon
so has part: feature:540888-540992:1:exon
so has part: feature:541872-542003:1:exon
so has part: feature:542804-542871:1:exon
so has part: feature:543750-543777:1:exon
so has part: feature:544030-544106:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:534269-534402:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:537571-537742:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:540888-540992:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:541872-542003:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:542804-542871:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:543750-543777:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:544030-544106:1:exon

position:544030:1
position: 544030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

EIF5A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: EIF5A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: eukaryotic translation initiation factor 5A-1
translation: MADDLDFETGDAGASATFPMQCSALRKNGFVVLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFTGKKYEDICPSTHNMDVPNIKRNDFQLIGIQDGYLSLLQDSGEVREDLRLPEGELGREIEQKYDCGEEILITVLSAMTEEAAVAIKAMAK
SIO_010081: EIF5A
subclass of: SO_0000673
so part of: EIF5A
location: join(537578..537742,540888..540992,541872..542003,542804..542866)
location: region:537578-542866:1
so has part: feature:537578-537742:1:exon
so has part: feature:540888-540992:1:exon
so has part: feature:541872-542003:1:exon
so has part: feature:542804-542866:1:exon

XP_041568206.1
type: Protein
SIO_000068: ncbiprotein

position:537578:1
position: 537578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:542866:1
position: 542866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:537578-537742:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:540888-540992:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:541872-542003:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:542804-542866:1:exon

EIF5A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: EIF5A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: eukaryotic translation initiation factor 5A-1
translation: MADDLDFETGDAGASATFPMQCSALRKNGFVVLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFTGKKYEDICPSTHNMDVPNIKRNDFQLIGIQDGYLSLLQDSGEVREDLRLPEGELGREIEQKYDCGEEILITVLSAMTEEAAVAIKAMAK
SIO_010081: EIF5A
subclass of: SO_0000673
so part of: EIF5A
location: join(537578..537742,540888..540992,541872..542003,542804..542866)
location: region:537578-542866:1
so has part: feature:537578-537742:1:exon
so has part: feature:540888-540992:1:exon
so has part: feature:541872-542003:1:exon
so has part: feature:542804-542866:1:exon

XP_041568207.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:537578-537742:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:540888-540992:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:541872-542003:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:542804-542866:1:exon

GPS2
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: GPS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(544690..556407)
location: region:544690-556407:-1
so has part: feature:544690-556407:-1:exon
subclass of: SO_0000010

121468534
type: Gene
SIO_000068: ncbigene

position:544690:-1
position: 544690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:556407:-1
position: 556407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:544690-556407:-1:exon

GPS2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: GPS2
product: G protein pathway suppressor 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_041712294.1
SIO_010081: GPS2
subclass of: SO_0000673
so part of: GPS2
location: complement(join(544690..544898,544992..545081,545794..545862,546390..546469,547609..547701,548328..548505,549560..549636,550357..550433,552045..552157,554960..555069,556072..556407))
location: region:544690-556407:-1
so has part: feature:556072-556407:-1:exon
so has part: feature:554960-555069:-1:exon
so has part: feature:552045-552157:-1:exon
so has part: feature:550357-550433:-1:exon
so has part: feature:549560-549636:-1:exon
so has part: feature:548328-548505:-1:exon
so has part: feature:547609-547701:-1:exon
so has part: feature:546390-546469:-1:exon
so has part: feature:545794-545862:-1:exon
so has part: feature:544992-545081:-1:exon
so has part: feature:544690-544898:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:556072-556407:-1:exon

position:556072:-1
position: 556072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:554960-555069:-1:exon

position:554960:-1
position: 554960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:555069:-1
position: 555069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:552045-552157:-1:exon

position:552045:-1
position: 552045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:552157:-1
position: 552157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:550357-550433:-1:exon

position:550357:-1
position: 550357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:550433:-1
position: 550433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:549560-549636:-1:exon

position:549560:-1
position: 549560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:549636:-1
position: 549636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:548328-548505:-1:exon

position:548328:-1
position: 548328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:548505:-1
position: 548505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:547609-547701:-1:exon

position:547609:-1
position: 547609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:547701:-1
position: 547701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:546390-546469:-1:exon

position:546390:-1
position: 546390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:546469:-1
position: 546469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:545794-545862:-1:exon

position:545794:-1
position: 545794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:545862:-1
position: 545862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:544992-545081:-1:exon

position:544992:-1
position: 544992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:545081:-1
position: 545081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:544690-544898:-1:exon

position:544898:-1
position: 544898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GPS2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: GPS2
product: G protein pathway suppressor 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 50 samples with support for all annotated introns
transcript id: XM_041712295.1
SIO_010081: GPS2
subclass of: SO_0000673
so part of: GPS2
location: complement(join(544692..544898,545794..545862,546390..546469,547609..547701,548328..548505,549560..549636,550357..550433,552045..552157,554960..555069,556072..556401))
location: region:544692-556401:-1
so has part: feature:556072-556401:-1:exon
so has part: feature:554960-555069:-1:exon
so has part: feature:552045-552157:-1:exon
so has part: feature:550357-550433:-1:exon
so has part: feature:549560-549636:-1:exon
so has part: feature:548328-548505:-1:exon
so has part: feature:547609-547701:-1:exon
so has part: feature:546390-546469:-1:exon
so has part: feature:545794-545862:-1:exon
so has part: feature:544692-544898:-1:exon

position:544692:-1
position: 544692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:556401:-1
position: 556401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:556072-556401:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:554960-555069:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:552045-552157:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:550357-550433:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:549560-549636:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:548328-548505:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:547609-547701:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:546390-546469:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:545794-545862:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:544692-544898:-1:exon

GPS2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: GPS2
product: G protein pathway suppressor 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_041712296.1
SIO_010081: GPS2
subclass of: SO_0000673
so part of: GPS2
location: complement(join(544692..544898,546390..546469,547609..547701,548328..548505,549560..549636,550357..550433,552045..552157,554960..555069,556072..556400))
location: region:544692-556400:-1
so has part: feature:556072-556400:-1:exon
so has part: feature:554960-555069:-1:exon
so has part: feature:552045-552157:-1:exon
so has part: feature:550357-550433:-1:exon
so has part: feature:549560-549636:-1:exon
so has part: feature:548328-548505:-1:exon
so has part: feature:547609-547701:-1:exon
so has part: feature:546390-546469:-1:exon
so has part: feature:544692-544898:-1:exon

position:556400:-1
position: 556400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:556072-556400:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:554960-555069:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:552045-552157:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:550357-550433:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:549560-549636:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:548328-548505:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:547609-547701:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:546390-546469:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:544692-544898:-1:exon

GPS2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: GPS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G protein pathway suppressor 2 isoform X3
translation: MPALLERPKLSSAMARALHRHVMVERERKRQEEEEVDKMMEQKVREEQERRRRKELEERMSLEETREQLLKLQEKLGALQEEKHQLFLQLKKVLHEEEKRRRKEQSDLTTLTAAAYPQSLGVPGAHLLGMTGSPGGPRSGLIGADRAKQMFGPPVISPRHFGAQPPFGAGGDPGAFGGAQGGPGPAPFGVGQSPAPPPPFPPAQPPPAYGGAQQLRAPAAFPALPFLPQQPPGGAFGLHGHFPPTQPGFLPPSSSLPLQKQLEHANSQSGFSEPARHGPFLPHGQGQRFYHK
SIO_010081: GPS2
subclass of: SO_0000673
so part of: GPS2
location: complement(join(544842..544898,546390..546469,547609..547701,548328..548505,549560..549636,550357..550433,552045..552157,554960..555069,556072..556165))
location: region:544842-556165:-1
so has part: feature:556072-556165:-1:exon
so has part: feature:554960-555069:-1:exon
so has part: feature:552045-552157:-1:exon
so has part: feature:550357-550433:-1:exon
so has part: feature:549560-549636:-1:exon
so has part: feature:548328-548505:-1:exon
so has part: feature:547609-547701:-1:exon
so has part: feature:546390-546469:-1:exon
so has part: feature:544842-544898:-1:exon

XP_041568230.1
type: Protein
SIO_000068: ncbiprotein

position:544842:-1
position: 544842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:556165:-1
position: 556165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:556072-556165:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:554960-555069:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:552045-552157:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:550357-550433:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:549560-549636:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:548328-548505:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:547609-547701:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:546390-546469:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:544842-544898:-1:exon

GPS2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: GPS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G protein pathway suppressor 2 isoform X2
translation: MPALLERPKLSSAMARALHRHVMVERERKRQEEEEVDKMMEQKVREEQERRRRKELEERMSLEETREQLLKLQEKLGALQEEKHQLFLQLKKVLHEEEKRRRKEQSDLTTLTAAAYPQSLGVPGAHLLGMTGSPGGPRSGLIGADRAKQMFGPPVISPRHFGAQPPFGAGGDPGAFGGAQGGPGPAPFGVGQSPAPPPPFPPAQPPPAYGGAQQLRAPAAFPALPFLPQQPPGGAFGLHGHFPPTQPGFLPPSSSLPLQKQLEHANSQSGFSEPALHPGPALLPSPQLPVAIQGSAKARHGPFLPHGQGQRFYHK
SIO_010081: GPS2
subclass of: SO_0000673
so part of: GPS2
location: complement(join(544842..544898,545794..545862,546390..546469,547609..547701,548328..548505,549560..549636,550357..550433,552045..552157,554960..555069,556072..556165))
location: region:544842-556165:-1
so has part: feature:556072-556165:-1:exon
so has part: feature:554960-555069:-1:exon
so has part: feature:552045-552157:-1:exon
so has part: feature:550357-550433:-1:exon
so has part: feature:549560-549636:-1:exon
so has part: feature:548328-548505:-1:exon
so has part: feature:547609-547701:-1:exon
so has part: feature:546390-546469:-1:exon
so has part: feature:545794-545862:-1:exon
so has part: feature:544842-544898:-1:exon

XP_041568229.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:556072-556165:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:554960-555069:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:552045-552157:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:550357-550433:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:549560-549636:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:548328-548505:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:547609-547701:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:546390-546469:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:545794-545862:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:544842-544898:-1:exon

GPS2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: GPS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G protein pathway suppressor 2 isoform X1
translation: MPALLERPKLSSAMARALHRHVMVERERKRQEEEEVDKMMEQKVREEQERRRRKELEERMSLEETREQLLKLQEKLGALQEEKHQLFLQLKKVLHEEEKRRRKEQSDLTTLTAAAYPQSLGVPGAHLLGMTGSPGGPRSGLIGADRAKQMFGPPVISPRHFGAQPPFGAGGDPGAFGGAQGGPGPAPFGVGQSPAPPPPFPPAQPPPAYGGAQQLRAPAAFPALPFLPQQPPGGAFGLHGHFPPTQPGFLPPSSSLPLQKQLEHANSQSGFSEPALHPGPALLPSPQLPVAIQGSAKPALPFPAPPRAASPGSFPAHGAAPQPPPPHARHGPFLPHGQGQRFYHK
SIO_010081: GPS2
subclass of: SO_0000673
so part of: GPS2
location: complement(join(544842..544898,544992..545081,545794..545862,546390..546469,547609..547701,548328..548505,549560..549636,550357..550433,552045..552157,554960..555069,556072..556165))
location: region:544842-556165:-1
so has part: feature:556072-556165:-1:exon
so has part: feature:554960-555069:-1:exon
so has part: feature:552045-552157:-1:exon
so has part: feature:550357-550433:-1:exon
so has part: feature:549560-549636:-1:exon
so has part: feature:548328-548505:-1:exon
so has part: feature:547609-547701:-1:exon
so has part: feature:546390-546469:-1:exon
so has part: feature:545794-545862:-1:exon
so has part: feature:544992-545081:-1:exon
so has part: feature:544842-544898:-1:exon

XP_041568228.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:556072-556165:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:554960-555069:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:552045-552157:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:550357-550433:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:549560-549636:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:548328-548505:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:547609-547701:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:546390-546469:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:545794-545862:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:544992-545081:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:544842-544898:-1:exon

NEURL4
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: NEURL4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(558281..605370)
location: region:558281-605370:-1
so has part: feature:558281-605370:-1:exon
subclass of: SO_0000010

121468518
type: Gene
SIO_000068: ncbigene

position:558281:-1
position: 558281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:605370:-1
position: 605370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:558281-605370:-1:exon

NEURL4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: NEURL4
product: neuralized E3 ubiquitin protein ligase 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 7 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041712251.1
SIO_010081: NEURL4
subclass of: SO_0000673
so part of: NEURL4
location: complement(join(558281..559274,559989..560160,560838..560950,561814..561940,562875..562973,564281..564374,566543..566722,568911..569069,570428..570565,571715..571897,572862..572960,573861..574064,575217..575362,577558..577683,579196..579365,582159..582237,582675..582751,584702..584903,586091..586253,586403..586488,587429..587610,588561..588846,590133..590205,591261..591349,592661..592772,595678..595841,596921..597001,599714..600158,604942..605370))
location: region:558281-605370:-1
so has part: feature:604942-605370:-1:exon
so has part: feature:599714-600158:-1:exon
so has part: feature:596921-597001:-1:exon
so has part: feature:595678-595841:-1:exon
so has part: feature:592661-592772:-1:exon
so has part: feature:591261-591349:-1:exon
so has part: feature:590133-590205:-1:exon
so has part: feature:588561-588846:-1:exon
so has part: feature:587429-587610:-1:exon
so has part: feature:586403-586488:-1:exon
so has part: feature:586091-586253:-1:exon
so has part: feature:584702-584903:-1:exon
so has part: feature:582675-582751:-1:exon
so has part: feature:582159-582237:-1:exon
so has part: feature:579196-579365:-1:exon
so has part: feature:577558-577683:-1:exon
so has part: feature:575217-575362:-1:exon
so has part: feature:573861-574064:-1:exon
so has part: feature:572862-572960:-1:exon
so has part: feature:571715-571897:-1:exon
so has part: feature:570428-570565:-1:exon
so has part: feature:568911-569069:-1:exon
so has part: feature:566543-566722:-1:exon
so has part: feature:564281-564374:-1:exon
so has part: feature:562875-562973:-1:exon
so has part: feature:561814-561940:-1:exon
so has part: feature:560838-560950:-1:exon
so has part: feature:559989-560160:-1:exon
so has part: feature:558281-559274:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:604942-605370:-1:exon

position:604942:-1
position: 604942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:599714-600158:-1:exon

position:599714:-1
position: 599714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:600158:-1
position: 600158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:596921-597001:-1:exon

position:596921:-1
position: 596921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:597001:-1
position: 597001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:595678-595841:-1:exon

position:595678:-1
position: 595678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:595841:-1
position: 595841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:592661-592772:-1:exon

position:592661:-1
position: 592661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:592772:-1
position: 592772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:591261-591349:-1:exon

position:591261:-1
position: 591261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:591349:-1
position: 591349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:590133-590205:-1:exon

position:590133:-1
position: 590133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:590205:-1
position: 590205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:588561-588846:-1:exon

position:588561:-1
position: 588561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:588846:-1
position: 588846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:587429-587610:-1:exon

position:587429:-1
position: 587429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:587610:-1
position: 587610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:586403-586488:-1:exon

position:586403:-1
position: 586403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:586488:-1
position: 586488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:586091-586253:-1:exon

position:586091:-1
position: 586091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:586253:-1
position: 586253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:584702-584903:-1:exon

position:584702:-1
position: 584702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:584903:-1
position: 584903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:582675-582751:-1:exon

position:582675:-1
position: 582675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:582751:-1
position: 582751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:582159-582237:-1:exon

position:582159:-1
position: 582159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:582237:-1
position: 582237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:579196-579365:-1:exon

position:579196:-1
position: 579196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:579365:-1
position: 579365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:577558-577683:-1:exon

position:577558:-1
position: 577558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:577683:-1
position: 577683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:575217-575362:-1:exon

position:575217:-1
position: 575217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:575362:-1
position: 575362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:573861-574064:-1:exon

position:573861:-1
position: 573861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:574064:-1
position: 574064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:572862-572960:-1:exon

position:572862:-1
position: 572862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:572960:-1
position: 572960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:571715-571897:-1:exon

position:571715:-1
position: 571715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:571897:-1
position: 571897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:570428-570565:-1:exon

position:570428:-1
position: 570428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:570565:-1
position: 570565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:568911-569069:-1:exon

position:568911:-1
position: 568911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:569069:-1
position: 569069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:566543-566722:-1:exon

position:566543:-1
position: 566543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:566722:-1
position: 566722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:564281-564374:-1:exon

position:564281:-1
position: 564281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:564374:-1
position: 564374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:562875-562973:-1:exon

position:562875:-1
position: 562875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:562973:-1
position: 562973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:561814-561940:-1:exon

position:561814:-1
position: 561814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:561940:-1
position: 561940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:560838-560950:-1:exon

position:560838:-1
position: 560838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:560950:-1
position: 560950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:559989-560160:-1:exon

position:559989:-1
position: 559989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:560160:-1
position: 560160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:558281-559274:-1:exon

position:559274:-1
position: 559274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NEURL4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: NEURL4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuralized-like protein 4
translation: MSRNVAKASRRRRGPAGRDGAMAAPGPGGGSGGAASAGAPGGAPGGAPGGAPGPPPELHPRCGRLVSLSQGGRSAARAQPGQEFNHGLVLSREPLRPGRVFTVRIDRKVNSWSGSIEVGVTALDPAVLDFPSSATGLRGGSWVLSGCSVLRDGRSLREDFGPDLDALAEGDRVGVEATAAGELRLWVNGRDCGVAAAGLPPRVWAVVDLYGKCTQVTVVPAPDVPPVPPVPPLITEVTQEVTREVAEVGDESGAAAAPPPAPPRAPPQPRPDTFPNSLEPPGGARSPTNEALLFHEKCGALIKLSNGHKTAERRRPLDEFNNGVVLTNRPLRDGEMFEIRIDKLVDKWSGSIEIGVTAHNPNSLEYPATMTNLRSGTIMMSGCGILTNGKGTRREYCEFSLDELQEGDHIGLTRKANNALHFYINGVDQGVATSLTPQVVYGVVDLYGMAVKVTIVHNHNHSDRLRRNNAILRALSPEGTAGTPRHRATATATAATAPPPRLLFHPNCGQKAAVVNEGRTALRPHATDDFNHGVVLSARPLGDNELFQVRLDKMVDKWAGSIEIGVTTHNPAYLQLPSTMTNLRSGTWMMTGNGVMHNGTTVLDEYGHNLDRLKAGDTVGVVRRDDGTLHFFVNGVPQGPAAWNVPPNVYAVVDLYGQAAQATIVEEGEVAALVGDSSEGDSGGGSPEGASPGASPSDLRFHRLHGANAVITNGGRTALRQNCRSEFNDAIVISNRALRDGELFEIVIQKMVDRWSGSIEAGVTAIRPEDLEFPNTMTDIDYDTWMLSGTAIMQDGNTMRNNYGCDLDALGTGARIGMMRTGGGDLRYFIDGTDQGVACSGLPPEVYAVVDLYGQCVQVSLTGASGPTDNSHSPGAGPEKAPPPSPAPGPCQRFHGRCGQNVALAAEGLSAARVAGYCHGLVFSRSHLRPGELFEVRIEALDERWAGSVRVGLTALPPPGPPALPPSLLDLPAAPTWAVSGAEVRHNGAQVRHNYGVSLDRLAVGNRLGVRRGADDSMHLVVDGQDMGPAATGVAKNAFVALDLYGRVTAVSIVSAGGGAGGAGDGPSPTHSPSPTPCPSPCHSPPLPHPGGDGAEWGPPRFLGCHGKNILLSNGGRTAARVSSYNQGLVLVGPPLPPGRLFQVQIDALNPQWSSSLALGVTGAPPGRAPLPACAHGLKRPAWILQRRGVFHNARKVRDLPGPSLELLPAGTILGLLVDGGGRLHLFINGRDQGAVAGGVPSPCHVLLDLYGQCQQVTIVTEGPAGGGSPSGDPRNRGDVEKADVVDGVKESLCWGPPAPPQPCPYQALCARFKDLLLLPDEYFAPEPRRSRCFCQGCERGGGDPRDPREPPLPLGWCRFSLRPKPRPEGGGGWQKWPRAYHGTSAGAVRRSLDRGELVPGPWSLLSAPCRPEPPGPAHPRSGPAPPGPGPRPPGPAPLVLSPALGYAAMEPFASRVTFREPGWPRPRGAQVAFEVWVRPGSFRAGPPSLSPPPALEPPQGLDPAQLEWVTKEPGATVLAGLLVRVD
SIO_010081: NEURL4
subclass of: SO_0000673
so part of: NEURL4
location: complement(join(559064..559274,559989..560160,560838..560950,561814..561940,562875..562973,564281..564374,566543..566722,568911..569069,570428..570565,571715..571897,572862..572960,573861..574064,575217..575362,577558..577683,579196..579365,582159..582237,582675..582751,584702..584903,586091..586253,586403..586488,587429..587610,588561..588846,590133..590205,591261..591349,592661..592772,595678..595841,596921..597001,599714..600158,604942..605265))
location: region:559064-605265:-1
so has part: feature:604942-605265:-1:exon
so has part: feature:599714-600158:-1:exon
so has part: feature:596921-597001:-1:exon
so has part: feature:595678-595841:-1:exon
so has part: feature:592661-592772:-1:exon
so has part: feature:591261-591349:-1:exon
so has part: feature:590133-590205:-1:exon
so has part: feature:588561-588846:-1:exon
so has part: feature:587429-587610:-1:exon
so has part: feature:586403-586488:-1:exon
so has part: feature:586091-586253:-1:exon
so has part: feature:584702-584903:-1:exon
so has part: feature:582675-582751:-1:exon
so has part: feature:582159-582237:-1:exon
so has part: feature:579196-579365:-1:exon
so has part: feature:577558-577683:-1:exon
so has part: feature:575217-575362:-1:exon
so has part: feature:573861-574064:-1:exon
so has part: feature:572862-572960:-1:exon
so has part: feature:571715-571897:-1:exon
so has part: feature:570428-570565:-1:exon
so has part: feature:568911-569069:-1:exon
so has part: feature:566543-566722:-1:exon
so has part: feature:564281-564374:-1:exon
so has part: feature:562875-562973:-1:exon
so has part: feature:561814-561940:-1:exon
so has part: feature:560838-560950:-1:exon
so has part: feature:559989-560160:-1:exon
so has part: feature:559064-559274:-1:exon

XP_041568185.1
type: Protein
SIO_000068: ncbiprotein

position:559064:-1
position: 559064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:605265:-1
position: 605265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:604942-605265:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:599714-600158:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:596921-597001:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:595678-595841:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:592661-592772:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:591261-591349:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:590133-590205:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:588561-588846:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:587429-587610:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:586403-586488:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:586091-586253:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:584702-584903:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:582675-582751:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:582159-582237:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:579196-579365:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:577558-577683:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:575217-575362:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:573861-574064:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:572862-572960:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:571715-571897:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:570428-570565:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:568911-569069:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:566543-566722:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:564281-564374:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:562875-562973:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:561814-561940:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:560838-560950:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:559989-560160:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:559064-559274:-1:exon

ACAP1
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: ACAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 607785..636815
location: region:607785-636815:1
so has part: feature:607785-636815:1:exon
subclass of: SO_0000010

115492620
type: Gene
SIO_000068: ncbigene

position:607785:1
position: 607785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:636815:1
position: 636815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:607785-636815:1:exon

ACAP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: ACAP1
product: ArfGAP with coiled-coil, ankyrin repeat and PH domains 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041712289.1
SIO_010081: ACAP1
subclass of: SO_0000673
so part of: ACAP1
location: join(607785..607881,611033..611090,612000..612119,612860..612913,613949..614004,615767..615950,617054..617098,617724..617819,618526..618600,619420..619532,620909..620960,622843..622943,623598..623703,624825..625000,626831..626900,627844..627928,629051..629206,630966..631159,632912..633021,634800..634910,634988..635037,636580..636815)
location: region:607785-636815:1
so has part: feature:607785-607881:1:exon
so has part: feature:611033-611090:1:exon
so has part: feature:612000-612119:1:exon
so has part: feature:612860-612913:1:exon
so has part: feature:613949-614004:1:exon
so has part: feature:615767-615950:1:exon
so has part: feature:617054-617098:1:exon
so has part: feature:617724-617819:1:exon
so has part: feature:618526-618600:1:exon
so has part: feature:619420-619532:1:exon
so has part: feature:620909-620960:1:exon
so has part: feature:622843-622943:1:exon
so has part: feature:623598-623703:1:exon
so has part: feature:624825-625000:1:exon
so has part: feature:626831-626900:1:exon
so has part: feature:627844-627928:1:exon
so has part: feature:629051-629206:1:exon
so has part: feature:630966-631159:1:exon
so has part: feature:632912-633021:1:exon
so has part: feature:634800-634910:1:exon
so has part: feature:634988-635037:1:exon
so has part: feature:636580-636815:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:607785-607881:1:exon

position:607881:1
position: 607881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:611033-611090:1:exon

position:611033:1
position: 611033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:611090:1
position: 611090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:612000-612119:1:exon

position:612000:1
position: 612000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:612119:1
position: 612119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:612860-612913:1:exon

position:612860:1
position: 612860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:612913:1
position: 612913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:613949-614004:1:exon

position:613949:1
position: 613949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:614004:1
position: 614004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:615767-615950:1:exon

position:615767:1
position: 615767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:615950:1
position: 615950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:617054-617098:1:exon

position:617054:1
position: 617054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:617098:1
position: 617098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:617724-617819:1:exon

position:617724:1
position: 617724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:617819:1
position: 617819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:618526-618600:1:exon

position:618526:1
position: 618526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:618600:1
position: 618600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:619420-619532:1:exon

position:619420:1
position: 619420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:619532:1
position: 619532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:620909-620960:1:exon

position:620909:1
position: 620909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:620960:1
position: 620960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:622843-622943:1:exon

position:622843:1
position: 622843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:622943:1
position: 622943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:623598-623703:1:exon

position:623598:1
position: 623598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:623703:1
position: 623703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:624825-625000:1:exon

position:624825:1
position: 624825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:625000:1
position: 625000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:626831-626900:1:exon

position:626831:1
position: 626831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:626900:1
position: 626900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:627844-627928:1:exon

position:627844:1
position: 627844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:627928:1
position: 627928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:629051-629206:1:exon

position:629051:1
position: 629051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:629206:1
position: 629206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:630966-631159:1:exon

position:630966:1
position: 630966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:631159:1
position: 631159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:632912-633021:1:exon

position:632912:1
position: 632912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:633021:1
position: 633021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:634800-634910:1:exon

position:634800:1
position: 634800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:634910:1
position: 634910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:634988-635037:1:exon

position:634988:1
position: 634988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:635037:1
position: 635037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:636580-636815:1:exon

position:636580:1
position: 636580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ACAP1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 59729
gene: ACAP1
product: ArfGAP with coiled-coil, ankyrin repeat and PH domains 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_005978447.1
SIO_010081: ACAP1
so part of: ACAP1
location: join(607785..607881,611033..611090,612000..612119,612860..612913,613949..614004,615767..615950,617054..617098,617724..617819,618526..618600,619420..619532,620909..620960,622843..622943,623598..623703,624825..625000,626831..626900,627844..627939,629061..629206,630966..631159,632912..633021,634800..634910)
location: region:607785-634910:1
so has part: feature:607785-607881:1:exon
so has part: feature:611033-611090:1:exon
so has part: feature:612000-612119:1:exon
so has part: feature:612860-612913:1:exon
so has part: feature:613949-614004:1:exon
so has part: feature:615767-615950:1:exon
so has part: feature:617054-617098:1:exon
so has part: feature:617724-617819:1:exon
so has part: feature:618526-618600:1:exon
so has part: feature:619420-619532:1:exon
so has part: feature:620909-620960:1:exon
so has part: feature:622843-622943:1:exon
so has part: feature:623598-623703:1:exon
so has part: feature:624825-625000:1:exon
so has part: feature:626831-626900:1:exon
so has part: feature:627844-627939:1:exon
so has part: feature:629061-629206:1:exon
so has part: feature:630966-631159:1:exon
so has part: feature:632912-633021:1:exon
so has part: feature:634800-634910:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:607785-607881:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:611033-611090:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:612000-612119:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:612860-612913:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:613949-614004:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:615767-615950:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:617054-617098:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:617724-617819:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:618526-618600:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:619420-619532:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:620909-620960:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:622843-622943:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:623598-623703:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:624825-625000:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:626831-626900:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:627844-627939:1:exon

position:627939:1
position: 627939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:629061-629206:1:exon

position:629061:1
position: 629061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:630966-631159:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:632912-633021:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:634800-634910:1:exon

ACAP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: ACAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 1
translation: MTVELDFEECLRDSPWFRAALDEAAADAAELETHLEKVLKLCSAVLEAGRVLEVSSRAFAAGLRELAGTPRGDPLVREALEKFCDSLEQMMDSHEELRSCTQSALGRHLEPLGHSLRSLLSAGRARSRAADLLQGALQHHAETPRRRPLEAAAAAAALGGARGVARARGLDYVLQLKVLQDRQKTEILQFVLSLLEAQAAFFTCGHQGETATRDYRGHLGAQLERAQLDAARRRRDLEQRHHLLLQQDLSREEVGVAAAGAGPEAPPMEGYLYKRASNAFRTWSRRWFFIQGSQMLYLKRARDPPTVLVEDLRLCTVKPCPDLERRFCFEIVSPSKCCVLQADSGPAQLRWVSAVQSGIASAYGQGTPKTQPPGRAGSLSGPPPEPPPVLGAILGLEGNGTCCDCREPHPEWASVNLGITLCIRCSAVHRGLGVHLSKVRSLTLDSWEPELVKLMCSLGNRALNGIYEARVEEMGVKRPPPDPPRAQRESWIRAKYVEKKFLRGVAGHAPRPRPPRHGPAPQPGHAPRGSPAHAPPAEPPEPPEAEGAPRLPPGALLFWAARRRRLRTMAEALARGAEPGWANAAQGNRTPLLEAVAANSLLGCEFLLQNGASVNQSDGRGQGPLHLATELGHTGLACLFLKRGADVNAVDADGRDPLTIAMDAANADIVTLLRLAKMREVEAAQGQTGDDTYLDIFRDISLMASDHPEKLARAPPPKHCTL
SIO_010081: ACAP1
subclass of: SO_0000673
so part of: ACAP1
location: join(607829..607881,611033..611090,612000..612119,612860..612913,613949..614004,615767..615950,617054..617098,617724..617819,618526..618600,619420..619532,620909..620960,622843..622943,623598..623703,624825..625000,626831..626900,627844..627928,629051..629206,630966..631159,632912..633021,634800..634910,634988..635037,636580..636683)
location: region:607829-636683:1
so has part: feature:607829-607881:1:exon
so has part: feature:611033-611090:1:exon
so has part: feature:612000-612119:1:exon
so has part: feature:612860-612913:1:exon
so has part: feature:613949-614004:1:exon
so has part: feature:615767-615950:1:exon
so has part: feature:617054-617098:1:exon
so has part: feature:617724-617819:1:exon
so has part: feature:618526-618600:1:exon
so has part: feature:619420-619532:1:exon
so has part: feature:620909-620960:1:exon
so has part: feature:622843-622943:1:exon
so has part: feature:623598-623703:1:exon
so has part: feature:624825-625000:1:exon
so has part: feature:626831-626900:1:exon
so has part: feature:627844-627928:1:exon
so has part: feature:629051-629206:1:exon
so has part: feature:630966-631159:1:exon
so has part: feature:632912-633021:1:exon
so has part: feature:634800-634910:1:exon
so has part: feature:634988-635037:1:exon
so has part: feature:636580-636683:1:exon

XP_041568223.1
type: Protein
SIO_000068: ncbiprotein

position:607829:1
position: 607829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:636683:1
position: 636683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:607829-607881:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:611033-611090:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:612000-612119:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:612860-612913:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:613949-614004:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:615767-615950:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:617054-617098:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:617724-617819:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:618526-618600:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:619420-619532:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:620909-620960:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:622843-622943:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:623598-623703:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:624825-625000:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:626831-626900:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:627844-627928:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:629051-629206:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:630966-631159:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:632912-633021:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:634800-634910:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:634988-635037:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:636580-636683:1:exon

LOC121468529
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121468529
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 638656..640262
location: region:638656-640262:1
so has part: feature:638656-640262:1:exon
subclass of: SO_0000011

121468529
type: Gene
SIO_000068: ncbigene

position:638656:1
position: 638656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:640262:1
position: 640262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:638656-640262:1:exon

LOC121468529
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC121468529
product: uncharacterized LOC121468529
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 116 samples with support for all annotated introns
transcript id: XR_005978446.1
SIO_010081: LOC121468529
subclass of: SO_0000673
so part of: LOC121468529
location: join(638656..638962,639489..639534,640205..640262)
location: region:638656-640262:1
so has part: feature:638656-638962:1:exon
so has part: feature:639489-639534:1:exon
so has part: feature:640205-640262:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:638656-638962:1:exon

position:638962:1
position: 638962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:639489-639534:1:exon

position:639489:1
position: 639489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:639534:1
position: 639534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:640205-640262:1:exon

position:640205:1
position: 640205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TP53
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: TP53
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 641289..652939
location: region:641289-652939:1
so has part: feature:641289-652939:1:exon
subclass of: SO_0000010

121468489
type: Gene
SIO_000068: ncbigene

position:641289:1
position: 641289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:652939:1
position: 652939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:641289-652939:1:exon

TP53
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: TP53
product: tumor protein p53
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_041712170.1
SIO_010081: TP53
subclass of: SO_0000673
so part of: TP53
location: join(641289..641411,643081..643261,645083..645195,647730..647839,649694..649815,650576..650655,651870..651955,652852..652939)
location: region:641289-652939:1
so has part: feature:641289-641411:1:exon
so has part: feature:643081-643261:1:exon
so has part: feature:645083-645195:1:exon
so has part: feature:647730-647839:1:exon
so has part: feature:649694-649815:1:exon
so has part: feature:650576-650655:1:exon
so has part: feature:651870-651955:1:exon
so has part: feature:652852-652939:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:641289-641411:1:exon

position:641411:1
position: 641411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:643081-643261:1:exon

position:643081:1
position: 643081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:643261:1
position: 643261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:645083-645195:1:exon

position:645083:1
position: 645083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:645195:1
position: 645195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:647730-647839:1:exon

position:647730:1
position: 647730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:647839:1
position: 647839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:649694-649815:1:exon

position:649694:1
position: 649694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:649815:1
position: 649815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:650576-650655:1:exon

position:650576:1
position: 650576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:650655:1
position: 650655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:651870-651955:1:exon

position:651870:1
position: 651870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:651955:1
position: 651955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:652852-652939:1:exon

position:652852:1
position: 652852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TP53
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: TP53
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cellular tumor antigen p53
translation: MGKKWEKTAKKRAKNGYKTRGERDFRLEFREMGMVKSVTCTYSPSLNKLFCRLAKPCPVQVRVGVPPPPGALLRAVAVYKKAEHVAEVVRRCPHHERCGTDGNAPAQHLIRVEGNPQARYQDDETTKRHSVAVPYEPPEVGSECTTVLYNFMCNSSCMGGMNRRPILTILTLEGPGGQILGRRCFEVRVCACPGRDRRHEEETQRKGGGAGGGAKRALPPPAEAPESSKKRVQDPDEEIFYLPVRGRQRFEMFRMVNEALEATFGGGPAPRKSKRRRPRGEGRVPRGKKLLLKGESGESD
SIO_010081: TP53
subclass of: SO_0000673
so part of: TP53
location: join(641289..641411,643081..643261,645083..645195,647730..647839,649694..649815,650576..650655,651870..651955,652852..652939)
location: region:641289-652939:1
so has part: feature:641289-641411:1:exon
so has part: feature:643081-643261:1:exon
so has part: feature:645083-645195:1:exon
so has part: feature:647730-647839:1:exon
so has part: feature:649694-649815:1:exon
so has part: feature:650576-650655:1:exon
so has part: feature:651870-651955:1:exon
so has part: feature:652852-652939:1:exon

XP_041568104.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:641289-641411:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:643081-643261:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:645083-645195:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:647730-647839:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:649694-649815:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:650576-650655:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:651870-651955:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:652852-652939:1:exon

ATP1B2
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: ATP1B2
note: ATPase Na+/K+ transporting subunit beta 2; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: complement(<658816..677222)
location: region:658816-677222:-1
so has part: feature:658816-677222:-1:exon
subclass of: SO_0000010

100190534
type: Gene
SIO_000068: ncbigene

position:658816:-1
position: 658816
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:677222:-1
position: 677222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:658816-677222:-1:exon

ATP1B2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: ATP1B2
product: ATPase Na+/K+ transporting subunit beta 2
inference: similar to RNA sequence, mRNA (same species):RefSeq:NM_001245333.1
exception: annotated by transcript or proteomic data
note: The RefSeq transcript has 11 substitutions, 1 non-frameshifting indel and aligns at 97% coverage compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001245333.1
SIO_010081: ATP1B2
subclass of: SO_0000673
so part of: ATP1B2
location: complement(join(<658816..659143,660928..661026,663227..663283,665198..665403,668578..668682,671821..671949,676992..677222))
location: region:658816-677222:-1
so has part: feature:676992-677222:-1:exon
so has part: feature:671821-671949:-1:exon
so has part: feature:668578-668682:-1:exon
so has part: feature:665198-665403:-1:exon
so has part: feature:663227-663283:-1:exon
so has part: feature:660928-661026:-1:exon
so has part: feature:658816-659143:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:676992-677222:-1:exon

position:676992:-1
position: 676992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:671821-671949:-1:exon

position:671821:-1
position: 671821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:671949:-1
position: 671949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:668578-668682:-1:exon

position:668578:-1
position: 668578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:668682:-1
position: 668682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:665198-665403:-1:exon

position:665198:-1
position: 665198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:665403:-1
position: 665403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:663227-663283:-1:exon

position:663227:-1
position: 663227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:663283:-1
position: 663283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:660928-661026:-1:exon

position:660928:-1
position: 660928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:661026:-1
position: 661026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:658816-659143:-1:exon

position:659143:-1
position: 659143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ATP1B2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: ATP1B2
inference: similar to AA sequence (same species):RefSeq:NP_001232262.1
exception: annotated by transcript or proteomic data
note: The RefSeq protein has 4 substitutions compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: sodium/potassium-transporting ATPase subunit beta-2
translation: MARDKEKRICGQVVAEWRAFLWDPRTRQFLGRTGSSWGLILLFYLVFYGFLAGLFALTMWVMLQSVNPHVPKYQYRLLTPGLMIRPCAEGLDVTFNVTQSHTWEQHVRALHQFLESYNDSVQAARNAACPAGRYNEQPDDAVPNYPKRACRFERSRLGPCAGLGPHGDYGYGSGRPCVLVKVNRVINFFPGKNKSINIVCAAKHEEDAALLGPLNLFPPNGTIDLMYFPYYGKRVHVNYTQPVVAVQFSNATANVDHHVECRLNAAGLRTDDERDKFAGRVAFRLRINRE
SIO_010081: ATP1B2
subclass of: SO_0000673
so part of: ATP1B2
location: complement(join(658979..659143,660928..661026,663227..663283,665198..665403,668578..668682,671821..671949,676992..677103))
location: region:658979-677103:-1
so has part: feature:676992-677103:-1:exon
so has part: feature:671821-671949:-1:exon
so has part: feature:668578-668682:-1:exon
so has part: feature:665198-665403:-1:exon
so has part: feature:663227-663283:-1:exon
so has part: feature:660928-661026:-1:exon
so has part: feature:658979-659143:-1:exon

NP_001232262.1
type: Protein
SIO_000068: ncbiprotein

position:658979:-1
position: 658979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:677103:-1
position: 677103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:676992-677103:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:671821-671949:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:668578-668682:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:665198-665403:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:663227-663283:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:660928-661026:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:658979-659143:-1:exon

GRK1
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: GRK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 681727..696047
location: region:681727-696047:1
so has part: feature:681727-696047:1:exon
subclass of: SO_0000010

121468541
type: Gene
SIO_000068: ncbigene

position:681727:1
position: 681727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:696047:1
position: 696047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:681727-696047:1:exon

GRK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: GRK1
product: G protein-coupled receptor kinase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 35 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_041712306.1
SIO_010081: GRK1
subclass of: SO_0000673
so part of: GRK1
location: join(681727..681804,683450..683937,685932..686218,687397..687524,689447..689604,690661..690744,691043..691167,692039..692240,695355..696047)
location: region:681727-696047:1
so has part: feature:681727-681804:1:exon
so has part: feature:683450-683937:1:exon
so has part: feature:685932-686218:1:exon
so has part: feature:687397-687524:1:exon
so has part: feature:689447-689604:1:exon
so has part: feature:690661-690744:1:exon
so has part: feature:691043-691167:1:exon
so has part: feature:692039-692240:1:exon
so has part: feature:695355-696047:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:681727-681804:1:exon

position:681804:1
position: 681804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:683450-683937:1:exon

position:683450:1
position: 683450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:683937:1
position: 683937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:685932-686218:1:exon

position:685932:1
position: 685932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:686218:1
position: 686218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:687397-687524:1:exon

position:687397:1
position: 687397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:687524:1
position: 687524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:689447-689604:1:exon

position:689447:1
position: 689447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:689604:1
position: 689604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:690661-690744:1:exon

position:690661:1
position: 690661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:690744:1
position: 690744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:691043-691167:1:exon

position:691043:1
position: 691043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:691167:1
position: 691167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:692039-692240:1:exon

position:692039:1
position: 692039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:692240:1
position: 692240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:695355-696047:1:exon

position:695355:1
position: 695355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GRK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: GRK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rhodopsin kinase GRK1
translation: MDIGGLETVVANSAYVSARGGPGGGGKERRSKARLRLPHISQCEALRAQLGGTAQNGAPNGAPPGHAQDGGQETSFRWQCVEQPIGKLLFRRFLEGRPEFAPAGALWAEIEAFEQCEDAEREEAAKRLRSRFFTPGGSEHCGFLSAAATAPPAGSAPAGDAFVPARRELLAHLEAAAWGPYRGSPEFGRFVQFKWLEGQAVSADAFAEFRVLGKGGFGEVCACQRRATGKMYANKRLNKKRLKKRKGYEAALVEKRILARVHSRFIVSLACAFQTKTDLCLVMTIMNGGDLRYHIYNVDEENPGFAEPRAVFYTAQILLGLEHLHQHRIVYRDLKPENVLLDDAGHVRLSDMGLAVELKDGESKTRGYAGTPGFMAPELLKNEDYDWSVDYFTLGVTVYEMLEAKGPFRRRGEKVENKEVTRRILNDPVTYSEKFSAAAREACEGLLAKDPQARLGFRDNGCAQLKAHPFFRSINWGRLEAGLVPPPFVPDPRRVYAKDLGDVGAFSTVKGVELDAGDAALCDAFASGTVPIPWQEELIETGVFQELNVWGAPGTLPPDLDPNAAGGAGGGKSSTCHLL
SIO_010081: GRK1
subclass of: SO_0000673
so part of: GRK1
location: join(683478..683937,685932..686218,687397..687524,689447..689604,690661..690744,691043..691167,692039..692240,695355..695650)
location: region:683478-695650:1
so has part: feature:683478-683937:1:exon
so has part: feature:685932-686218:1:exon
so has part: feature:687397-687524:1:exon
so has part: feature:689447-689604:1:exon
so has part: feature:690661-690744:1:exon
so has part: feature:691043-691167:1:exon
so has part: feature:692039-692240:1:exon
so has part: feature:695355-695650:1:exon

XP_041568240.1
type: Protein
SIO_000068: ncbiprotein

position:683478:1
position: 683478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:695650:1
position: 695650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:683478-683937:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:685932-686218:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:687397-687524:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:689447-689604:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:690661-690744:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:691043-691167:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:692039-692240:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:695355-695650:1:exon

ZBTB4
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: ZBTB4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(700967..713125)
location: region:700967-713125:-1
so has part: feature:700967-713125:-1:exon
subclass of: SO_0000010

115492619
type: Gene
SIO_000068: ncbigene

position:700967:-1
position: 700967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:713125:-1
position: 713125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:700967-713125:-1:exon

ZBTB4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: ZBTB4
product: zinc finger and BTB domain containing 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 92 samples with support for all annotated introns
transcript id: XM_041712247.1
SIO_010081: ZBTB4
subclass of: SO_0000673
so part of: ZBTB4
location: complement(join(700967..704619,707958..708034,710108..710188,713018..713125))
location: region:700967-713125:-1
so has part: feature:713018-713125:-1:exon
so has part: feature:710108-710188:-1:exon
so has part: feature:707958-708034:-1:exon
so has part: feature:700967-704619:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:713018-713125:-1:exon

position:713018:-1
position: 713018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:710108-710188:-1:exon

position:710108:-1
position: 710108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:710188:-1
position: 710188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:707958-708034:-1:exon

position:707958:-1
position: 707958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:708034:-1
position: 708034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:700967-704619:-1:exon

position:704619:-1
position: 704619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZBTB4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: ZBTB4
product: zinc finger and BTB domain containing 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_041712248.1
SIO_010081: ZBTB4
subclass of: SO_0000673
so part of: ZBTB4
location: complement(join(700967..704619,707958..708034,710108..710188,712367..712405))
location: region:700967-712405:-1
so has part: feature:712367-712405:-1:exon
so has part: feature:710108-710188:-1:exon
so has part: feature:707958-708034:-1:exon
so has part: feature:700967-704619:-1:exon

position:712405:-1
position: 712405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:712367-712405:-1:exon

position:712367:-1
position: 712367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:710108-710188:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:707958-708034:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:700967-704619:-1:exon

ZBTB4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: ZBTB4
product: zinc finger and BTB domain containing 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_041712249.1
SIO_010081: ZBTB4
subclass of: SO_0000673
so part of: ZBTB4
location: complement(join(700967..704619,707958..708034,709883..709962))
location: region:700967-709962:-1
so has part: feature:709883-709962:-1:exon
so has part: feature:707958-708034:-1:exon
so has part: feature:700967-704619:-1:exon

position:709962:-1
position: 709962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:709883-709962:-1:exon

position:709883:-1
position: 709883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:707958-708034:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:700967-704619:-1:exon

ZBTB4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: ZBTB4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger and BTB domain-containing protein 4
translation: MAPVVEVSDAGHCRALLLELNEQRLRGQFCDVTIIAEDTKFRAHKNVLAASSPFFKRALAQEPTCPSPAQVLELPGVQAGVFSDVLNFIYNSRLAVPSPAAARALGAVGRRLGIPSLQGLEAGPAPPPAPRDTNGAWSPPAPAAEPARAARPGQAGEDAAPAAEEAEEAAEASLRCGLCGRSFGSAAALGFHAKLHRGRRGLCCRHCGKSFIHVKRLQTHEVGCRDGDSGDGDNNTAGTDSAVSSSAVTTTTTTTTNSAAAAPRAAKKALLLRHRALEPGAEQEPLVKVVDGQVLYLCGVCQRSYMTLSSLKRHANVHSWRRKYPCRYCDKVFALAEYRTKHEVWHTGERRYQCIFCWDTFVTYYNLKTHQKAFHGISPGLIASEKTPNGGYRPKLNALKLYRLLPMRANKRPYKTYSQGAVPDGAAPAPAAAPGDAGAAAFPPAAPPRPEPASVIAYGRAAPSVIVRGGGGSGAASVIAYNGRAGEEAPGAAEAPAAAPVTPAVPIKKQVLRDYIEAQRAAAEGAATEGTAATAPQNPGGGGRTMTYVAKPAYAGSAAAGEGLCQITVRIGEEAIVKRRISGTDLRGDGAAEERRGDGDDDSDAEDRLWRPYYSYKPKRKAGGTAGTAAAPGAAKKPRWRRKLRSLRRATGDDGEDGRQRGDAARRRERQHPCRVCGKSFPALRKLRKHQRGHEAPVGTAGTAPGRVGRRPSLRFACPTCAKVCKTAAALSRHAQRHRRRAQGSPGSPGSPPGSAPGSPGSAPGSAPGSPPGSPPRSPAPPTVIAYTPPAADRGGVPVSPGVTGAVPPAPGDTGGGDTGRCDTVGDRGGDPMGDRGGDTGGGDPVGDPGGFPVQDQPLALLCRAPGGDPELGDAPGGGLGVGDGGGHLGGVPAPPPPLPPPRSRCPSGPAWSPRTPSPSRCPSPSSCPSPSAASSGRGEGRGARPSPPPPPARPPPPLASPVGEGSGPGRRGGGT
SIO_010081: ZBTB4
subclass of: SO_0000673
so part of: ZBTB4
location: complement(701674..704604)
location: region:701674-704604:-1
so has part: feature:701674-704604:-1:exon

XP_041568181.1
type: Protein
SIO_000068: ncbiprotein

position:701674:-1
position: 701674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:704604:-1
position: 704604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:701674-704604:-1:exon

ZBTB4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: ZBTB4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger and BTB domain-containing protein 4
translation: MAPVVEVSDAGHCRALLLELNEQRLRGQFCDVTIIAEDTKFRAHKNVLAASSPFFKRALAQEPTCPSPAQVLELPGVQAGVFSDVLNFIYNSRLAVPSPAAARALGAVGRRLGIPSLQGLEAGPAPPPAPRDTNGAWSPPAPAAEPARAARPGQAGEDAAPAAEEAEEAAEASLRCGLCGRSFGSAAALGFHAKLHRGRRGLCCRHCGKSFIHVKRLQTHEVGCRDGDSGDGDNNTAGTDSAVSSSAVTTTTTTTTNSAAAAPRAAKKALLLRHRALEPGAEQEPLVKVVDGQVLYLCGVCQRSYMTLSSLKRHANVHSWRRKYPCRYCDKVFALAEYRTKHEVWHTGERRYQCIFCWDTFVTYYNLKTHQKAFHGISPGLIASEKTPNGGYRPKLNALKLYRLLPMRANKRPYKTYSQGAVPDGAAPAPAAAPGDAGAAAFPPAAPPRPEPASVIAYGRAAPSVIVRGGGGSGAASVIAYNGRAGEEAPGAAEAPAAAPVTPAVPIKKQVLRDYIEAQRAAAEGAATEGTAATAPQNPGGGGRTMTYVAKPAYAGSAAAGEGLCQITVRIGEEAIVKRRISGTDLRGDGAAEERRGDGDDDSDAEDRLWRPYYSYKPKRKAGGTAGTAAAPGAAKKPRWRRKLRSLRRATGDDGEDGRQRGDAARRRERQHPCRVCGKSFPALRKLRKHQRGHEAPVGTAGTAPGRVGRRPSLRFACPTCAKVCKTAAALSRHAQRHRRRAQGSPGSPGSPPGSAPGSPGSAPGSAPGSPPGSPPRSPAPPTVIAYTPPAADRGGVPVSPGVTGAVPPAPGDTGGGDTGRCDTVGDRGGDPMGDRGGDTGGGDPVGDPGGFPVQDQPLALLCRAPGGDPELGDAPGGGLGVGDGGGHLGGVPAPPPPLPPPRSRCPSGPAWSPRTPSPSRCPSPSSCPSPSAASSGRGEGRGARPSPPPPPARPPPPLASPVGEGSGPGRRGGGT
SIO_010081: ZBTB4
subclass of: SO_0000673
so part of: ZBTB4
location: complement(701674..704604)
location: region:701674-704604:-1
so has part: feature:701674-704604:-1:exon

XP_041568182.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:701674-704604:-1:exon

ZBTB4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: ZBTB4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger and BTB domain-containing protein 4
translation: MAPVVEVSDAGHCRALLLELNEQRLRGQFCDVTIIAEDTKFRAHKNVLAASSPFFKRALAQEPTCPSPAQVLELPGVQAGVFSDVLNFIYNSRLAVPSPAAARALGAVGRRLGIPSLQGLEAGPAPPPAPRDTNGAWSPPAPAAEPARAARPGQAGEDAAPAAEEAEEAAEASLRCGLCGRSFGSAAALGFHAKLHRGRRGLCCRHCGKSFIHVKRLQTHEVGCRDGDSGDGDNNTAGTDSAVSSSAVTTTTTTTTNSAAAAPRAAKKALLLRHRALEPGAEQEPLVKVVDGQVLYLCGVCQRSYMTLSSLKRHANVHSWRRKYPCRYCDKVFALAEYRTKHEVWHTGERRYQCIFCWDTFVTYYNLKTHQKAFHGISPGLIASEKTPNGGYRPKLNALKLYRLLPMRANKRPYKTYSQGAVPDGAAPAPAAAPGDAGAAAFPPAAPPRPEPASVIAYGRAAPSVIVRGGGGSGAASVIAYNGRAGEEAPGAAEAPAAAPVTPAVPIKKQVLRDYIEAQRAAAEGAATEGTAATAPQNPGGGGRTMTYVAKPAYAGSAAAGEGLCQITVRIGEEAIVKRRISGTDLRGDGAAEERRGDGDDDSDAEDRLWRPYYSYKPKRKAGGTAGTAAAPGAAKKPRWRRKLRSLRRATGDDGEDGRQRGDAARRRERQHPCRVCGKSFPALRKLRKHQRGHEAPVGTAGTAPGRVGRRPSLRFACPTCAKVCKTAAALSRHAQRHRRRAQGSPGSPGSPPGSAPGSPGSAPGSAPGSPPGSPPRSPAPPTVIAYTPPAADRGGVPVSPGVTGAVPPAPGDTGGGDTGRCDTVGDRGGDPMGDRGGDTGGGDPVGDPGGFPVQDQPLALLCRAPGGDPELGDAPGGGLGVGDGGGHLGGVPAPPPPLPPPRSRCPSGPAWSPRTPSPSRCPSPSSCPSPSAASSGRGEGRGARPSPPPPPARPPPPLASPVGEGSGPGRRGGGT
SIO_010081: ZBTB4
subclass of: SO_0000673
so part of: ZBTB4
location: complement(701674..704604)
location: region:701674-704604:-1
so has part: feature:701674-704604:-1:exon

XP_041568183.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:701674-704604:-1:exon

POLR2A
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: POLR2A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 716230..756734
location: region:716230-756734:1
so has part: feature:716230-756734:1:exon
subclass of: SO_0000010

115492686
type: Gene
SIO_000068: ncbigene

position:716230:1
position: 716230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:756734:1
position: 756734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:716230-756734:1:exon

POLR2A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: POLR2A
product: RNA polymerase II subunit A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_041712192.1
SIO_010081: POLR2A
subclass of: SO_0000673
so part of: POLR2A
location: join(716230..717659,718531..718663,719663..719799,720358..720531,721803..722084,722830..722991,724530..724750,725671..725803,726840..726964,728240..728450,730918..731127,732111..732279,732773..732867,735095..735298,737490..737712,739161..739344,741115..741286,741822..741927,742431..742636,744689..744913,746572..746818,748666..748766,748868..748972,749655..749837,750962..751165,752369..752555,753182..753295,753979..754128,755509..756734)
location: region:716230-756734:1
so has part: feature:716230-717659:1:exon
so has part: feature:718531-718663:1:exon
so has part: feature:719663-719799:1:exon
so has part: feature:720358-720531:1:exon
so has part: feature:721803-722084:1:exon
so has part: feature:722830-722991:1:exon
so has part: feature:724530-724750:1:exon
so has part: feature:725671-725803:1:exon
so has part: feature:726840-726964:1:exon
so has part: feature:728240-728450:1:exon
so has part: feature:730918-731127:1:exon
so has part: feature:732111-732279:1:exon
so has part: feature:732773-732867:1:exon
so has part: feature:735095-735298:1:exon
so has part: feature:737490-737712:1:exon
so has part: feature:739161-739344:1:exon
so has part: feature:741115-741286:1:exon
so has part: feature:741822-741927:1:exon
so has part: feature:742431-742636:1:exon
so has part: feature:744689-744913:1:exon
so has part: feature:746572-746818:1:exon
so has part: feature:748666-748766:1:exon
so has part: feature:748868-748972:1:exon
so has part: feature:749655-749837:1:exon
so has part: feature:750962-751165:1:exon
so has part: feature:752369-752555:1:exon
so has part: feature:753182-753295:1:exon
so has part: feature:753979-754128:1:exon
so has part: feature:755509-756734:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:716230-717659:1:exon

position:717659:1
position: 717659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:718531-718663:1:exon

position:718531:1
position: 718531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:718663:1
position: 718663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:719663-719799:1:exon

position:719663:1
position: 719663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:719799:1
position: 719799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:720358-720531:1:exon

position:720358:1
position: 720358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:720531:1
position: 720531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:721803-722084:1:exon

position:721803:1
position: 721803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:722084:1
position: 722084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:722830-722991:1:exon

position:722830:1
position: 722830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:722991:1
position: 722991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:724530-724750:1:exon

position:724530:1
position: 724530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:724750:1
position: 724750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:725671-725803:1:exon

position:725671:1
position: 725671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:725803:1
position: 725803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:726840-726964:1:exon

position:726840:1
position: 726840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:726964:1
position: 726964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:728240-728450:1:exon

position:728240:1
position: 728240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:728450:1
position: 728450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:730918-731127:1:exon

position:730918:1
position: 730918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:731127:1
position: 731127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:732111-732279:1:exon

position:732111:1
position: 732111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:732279:1
position: 732279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:732773-732867:1:exon

position:732773:1
position: 732773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:732867:1
position: 732867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:735095-735298:1:exon

position:735095:1
position: 735095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:735298:1
position: 735298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:737490-737712:1:exon

position:737490:1
position: 737490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:737712:1
position: 737712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:739161-739344:1:exon

position:739161:1
position: 739161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:739344:1
position: 739344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:741115-741286:1:exon

position:741115:1
position: 741115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:741286:1
position: 741286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:741822-741927:1:exon

position:741822:1
position: 741822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:741927:1
position: 741927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:742431-742636:1:exon

position:742431:1
position: 742431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:742636:1
position: 742636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:744689-744913:1:exon

position:744689:1
position: 744689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:744913:1
position: 744913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:746572-746818:1:exon

position:746572:1
position: 746572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:746818:1
position: 746818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:748666-748766:1:exon

position:748666:1
position: 748666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:748766:1
position: 748766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:748868-748972:1:exon

position:748868:1
position: 748868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:748972:1
position: 748972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:749655-749837:1:exon

position:749655:1
position: 749655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:749837:1
position: 749837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:750962-751165:1:exon

position:750962:1
position: 750962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:751165:1
position: 751165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:752369-752555:1:exon

position:752369:1
position: 752369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:752555:1
position: 752555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:753182-753295:1:exon

position:753182:1
position: 753182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:753295:1
position: 753295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:753979-754128:1:exon

position:753979:1
position: 753979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:754128:1
position: 754128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:755509-756734:1:exon

position:755509:1
position: 755509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

POLR2A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: POLR2A
product: RNA polymerase II subunit A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 49 samples with support for all annotated introns
transcript id: XM_041712193.1
SIO_010081: POLR2A
subclass of: SO_0000673
so part of: POLR2A
location: join(716230..717659,718531..718663,719663..719799,720358..720531,721803..722009,722198..722272,722830..722991,724530..724750,725671..725803,726840..726964,728240..728450,730918..731127,732111..732279,732773..732867,735095..735298,737490..737712,739161..739344,741115..741286,741822..741927,742431..742636,744689..744913,746572..746818,748666..748766,748868..748972,749655..749837,750962..751165,752369..752555,753182..753295,753979..754128,755509..756734)
location: region:716230-756734:1
so has part: feature:716230-717659:1:exon
so has part: feature:718531-718663:1:exon
so has part: feature:719663-719799:1:exon
so has part: feature:720358-720531:1:exon
so has part: feature:721803-722009:1:exon
so has part: feature:722198-722272:1:exon
so has part: feature:722830-722991:1:exon
so has part: feature:724530-724750:1:exon
so has part: feature:725671-725803:1:exon
so has part: feature:726840-726964:1:exon
so has part: feature:728240-728450:1:exon
so has part: feature:730918-731127:1:exon
so has part: feature:732111-732279:1:exon
so has part: feature:732773-732867:1:exon
so has part: feature:735095-735298:1:exon
so has part: feature:737490-737712:1:exon
so has part: feature:739161-739344:1:exon
so has part: feature:741115-741286:1:exon
so has part: feature:741822-741927:1:exon
so has part: feature:742431-742636:1:exon
so has part: feature:744689-744913:1:exon
so has part: feature:746572-746818:1:exon
so has part: feature:748666-748766:1:exon
so has part: feature:748868-748972:1:exon
so has part: feature:749655-749837:1:exon
so has part: feature:750962-751165:1:exon
so has part: feature:752369-752555:1:exon
so has part: feature:753182-753295:1:exon
so has part: feature:753979-754128:1:exon
so has part: feature:755509-756734:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:716230-717659:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:718531-718663:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:719663-719799:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:720358-720531:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:721803-722009:1:exon

position:722009:1
position: 722009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:722198-722272:1:exon

position:722198:1
position: 722198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:722272:1
position: 722272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:722830-722991:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:724530-724750:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:725671-725803:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:726840-726964:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:728240-728450:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:730918-731127:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:732111-732279:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:732773-732867:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:735095-735298:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:737490-737712:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:739161-739344:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:741115-741286:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:741822-741927:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:742431-742636:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:744689-744913:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:746572-746818:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:748666-748766:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:748868-748972:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:749655-749837:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:750962-751165:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:752369-752555:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:753182-753295:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:753979-754128:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:755509-756734:1:exon

POLR2A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: POLR2A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA-directed RNA polymerase II subunit RPB1 isoform X1
translation: MHGGPPSGDSACPLRTIKRVQFGILSPDEMKRMSVTEGGIKYPETTEGGRPKLGGLMDPRQGVIERTGRCQTCAGNMTECPGHFGHIELAKPVFHVGFLGKTMKILRCVCFFCSKLLVDSNNPKIKDILGKSKGQPKKRLTHVYDLCKGKNICEGGEEMDHKFGVEQPEGDEDLTKEKGHGGCGRYQPRIRRSGLELYAEWKHVNEDSQEKKILLSPERVHEIFKRISDEECFVLGMDPKFARPEWMVCTVLPVPPLSVRPAVVMQGSARNQDDLTHKLADIVKINNQLRRNEQNGAAAHVIAEDVKLLQFHVATMVDNELPGLPRAMQKSGRPLKSLKQRLKGKEGRVRGNLMGKRVDFSARTVITPDPNLAIDQVGVPRSIAANMTFAEIVTPFNIDRLQELVRRGNSQYPGAKYIIRDNGDRIDLRFHPKPSDLHLQIGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWSTFRLNLSVTTPYNADFDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQDTLTAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIIPGHINCIRTHSTHPDDEDSGPYKHISPGDTKVIVENGELIMGILCKKSLGTSAGSLVHISYLEMGHDTTRLFYSNIQTVINNWLLIEGHTIGIGDSIADAKTYQDIQNTIKKAKQDVIEVIEKAHNNELEPTPGNTLRQTFENQVNRILNDARDKTGSSAQKSLSEYNNFKSMVVSGAKGSKINISQVIAVVGQQNVEGKRIPFGFKHRTLPHFIKDDYGPESRGFVENSYLAGLTPTEFFFHAMGGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGEDGLAGESVEFQNLATLKPSNKAFEKKFKFDYTNERALRRTLQEELVKDILSNAHIQNELEREFDRMREDREVLRVIFPTGDSKVVLPCNLLRMIWNAQKIFHINSRLPSDLHPVKVVEGVKELSRKLVIVNGEDPLSRQAQENATLLFNIHLRSTLCSRRMVEEFRLSGEAFDWLLGEIESKFNQAIAHPGEMVGALAAQSLGEPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKKPKTPSLTVFLLGQSARDAERAKDILCRLEHTTLRKVTANTAIYYDPNPQSTVVAEDQEWVNVYYEMPDFDVSRISPWLLRVELDRKHMTDRKLTMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIRIMNSDENKMQEEEEVVDKMDDDVFLRCIESNMLTDMTLQGIEQISKVYMHLPQTDNKKKIIITEDGEFKALQEWILETDGVSLMRVLSEKDVDPVRTTSNDIVEIFTVLGIEAVRKALERELYHVISFDGSYVNYRHLALLCDTMTSRGHLMAITRHGVNRQDTGPLMKCSFEETVDVLMEAAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLLDAEKCKHGMEIPSALPGLGVGGPTGMFFGSAPSPMGGMSPAMTPWNQGATPAYGAWSPSVGSGMTPGGAGFSPSAASDASGFSPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDDSDDDN
SIO_010081: POLR2A
subclass of: SO_0000673
so part of: POLR2A
location: join(717570..717659,718531..718663,719663..719799,720358..720531,721803..722084,722830..722991,724530..724750,725671..725803,726840..726964,728240..728450,730918..731127,732111..732279,732773..732867,735095..735298,737490..737712,739161..739344,741115..741286,741822..741927,742431..742636,744689..744913,746572..746818,748666..748766,748868..748972,749655..749837,750962..751165,752369..752555,753182..753295,753979..754128,755509..756665)
location: region:717570-756665:1
so has part: feature:717570-717659:1:exon
so has part: feature:718531-718663:1:exon
so has part: feature:719663-719799:1:exon
so has part: feature:720358-720531:1:exon
so has part: feature:721803-722084:1:exon
so has part: feature:722830-722991:1:exon
so has part: feature:724530-724750:1:exon
so has part: feature:725671-725803:1:exon
so has part: feature:726840-726964:1:exon
so has part: feature:728240-728450:1:exon
so has part: feature:730918-731127:1:exon
so has part: feature:732111-732279:1:exon
so has part: feature:732773-732867:1:exon
so has part: feature:735095-735298:1:exon
so has part: feature:737490-737712:1:exon
so has part: feature:739161-739344:1:exon
so has part: feature:741115-741286:1:exon
so has part: feature:741822-741927:1:exon
so has part: feature:742431-742636:1:exon
so has part: feature:744689-744913:1:exon
so has part: feature:746572-746818:1:exon
so has part: feature:748666-748766:1:exon
so has part: feature:748868-748972:1:exon
so has part: feature:749655-749837:1:exon
so has part: feature:750962-751165:1:exon
so has part: feature:752369-752555:1:exon
so has part: feature:753182-753295:1:exon
so has part: feature:753979-754128:1:exon
so has part: feature:755509-756665:1:exon

XP_041568126.1
type: Protein
SIO_000068: ncbiprotein

position:717570:1
position: 717570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:756665:1
position: 756665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:717570-717659:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:718531-718663:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:719663-719799:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:720358-720531:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:721803-722084:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:722830-722991:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:724530-724750:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:725671-725803:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:726840-726964:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:728240-728450:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:730918-731127:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:732111-732279:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:732773-732867:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:735095-735298:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:737490-737712:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:739161-739344:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:741115-741286:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:741822-741927:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:742431-742636:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:744689-744913:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:746572-746818:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:748666-748766:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:748868-748972:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:749655-749837:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:750962-751165:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:752369-752555:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:753182-753295:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:753979-754128:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:755509-756665:1:exon

POLR2A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: POLR2A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA-directed RNA polymerase II subunit RPB1 isoform X2
translation: MHGGPPSGDSACPLRTIKRVQFGILSPDEMKRMSVTEGGIKYPETTEGGRPKLGGLMDPRQGVIERTGRCQTCAGNMTECPGHFGHIELAKPVFHVGFLGKTMKILRCVCFFCSKLLVDSNNPKIKDILGKSKGQPKKRLTHVYDLCKGKNICEGGEEMDHKFGVEQPEGDEDLTKEKGHGGCGRYQPRIRRSGLELYAEWKHVNEDSQEKKILLSPERVHEIFKRISDEECFVLGMDPKFARPEWMVCTVLPVPPLSVRPAVVMQGSARNQDDLTHKLADIVKINNQLRRNEQNGAAAHVIAEDVKLLQFHVATMVDNELPGLPRAMQKSGRPLKSLKQRLKGKEGRVRGNLMGKRVDFSARTVITPDPNLAIDQVGVPRSIAANMTFAEIVTPFNIDRLQELVRRGNSQYPGAKYIIRDNGDRIDLRFHPKPSDLHLQIGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWSTFRLNLSVTTPYNADFDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQDTLTAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIIPGHINCIRTHSTHPDDEDSGPYKHISPGDTKVIVENGELIMGILCKKSLGTSAGSLVHISYLEMGHDTTRLFYSNIQTVINNWLLIEGHTIGIGDSIADAKTYQDIQNTIKKAKQDVIEVIEKAHNNELEPTPGNTLRQTFENQVNRILNDARDKTGSSAQKSLSEYNNFKSMVVSGAKGSKINISQVIAVVGQQNVEGKRIPFGFKHRTLPHFIKDDYGPESRGFVENSYLAGLTPTEFFFHAMGGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGEDGLAGESVEFQNLATLKPSNKAFEKKFKFDYTNERALRRTLQEELVKDILSNAHIQNELEREFDRMREDREVLRVIFPTGDSKVVLPCNLLRMIWNAQKIFHINSRLPSDLHPVKVVEGVKELSRKLVIVNGEDPLSRQAQENATLLFNIHLRSTLCSRRMVEEFRLSGEAFDWLLGEIESKFNQAIAHPGEMVGALAAQSLGEPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKKPKTPSLTVFLLGQSARDAERAKDILCRLEHTTLRKVTANTAIYYDPNPQSTVVAEDQEWVNVYYEMPDFDVSRISPWLLRVELDRKHMTDRKLTMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIRIMNSDENKMQEEEEVVDKMDDDVFLRCIESNMLTDMTLQGIEQISKVYMHLPQTDNKKKIIITEDGEFKALQEWILETDGVSLMRVLSEKDVDPVRTTSNDIVEIFTVLGIEAVRKALERELYHVISFDGSYVNYRHLALLCDTMTSRGHLMAITRHGVNRQDTGPLMKCSFEETVDVLMEAAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLLDAEKCKHGMEIPSALPGLGVGGPTGMFFGSAPSPMGGMSPAMTPWNQGATPAYGAWSPSVGSGMTPGGAGFSPSAASDASGFSPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDDSDDDN
SIO_010081: POLR2A
subclass of: SO_0000673
so part of: POLR2A
location: join(717570..717659,718531..718663,719663..719799,720358..720531,721803..722009,722198..722272,722830..722991,724530..724750,725671..725803,726840..726964,728240..728450,730918..731127,732111..732279,732773..732867,735095..735298,737490..737712,739161..739344,741115..741286,741822..741927,742431..742636,744689..744913,746572..746818,748666..748766,748868..748972,749655..749837,750962..751165,752369..752555,753182..753295,753979..754128,755509..756665)
location: region:717570-756665:1
so has part: feature:717570-717659:1:exon
so has part: feature:718531-718663:1:exon
so has part: feature:719663-719799:1:exon
so has part: feature:720358-720531:1:exon
so has part: feature:721803-722009:1:exon
so has part: feature:722198-722272:1:exon
so has part: feature:722830-722991:1:exon
so has part: feature:724530-724750:1:exon
so has part: feature:725671-725803:1:exon
so has part: feature:726840-726964:1:exon
so has part: feature:728240-728450:1:exon
so has part: feature:730918-731127:1:exon
so has part: feature:732111-732279:1:exon
so has part: feature:732773-732867:1:exon
so has part: feature:735095-735298:1:exon
so has part: feature:737490-737712:1:exon
so has part: feature:739161-739344:1:exon
so has part: feature:741115-741286:1:exon
so has part: feature:741822-741927:1:exon
so has part: feature:742431-742636:1:exon
so has part: feature:744689-744913:1:exon
so has part: feature:746572-746818:1:exon
so has part: feature:748666-748766:1:exon
so has part: feature:748868-748972:1:exon
so has part: feature:749655-749837:1:exon
so has part: feature:750962-751165:1:exon
so has part: feature:752369-752555:1:exon
so has part: feature:753182-753295:1:exon
so has part: feature:753979-754128:1:exon
so has part: feature:755509-756665:1:exon

XP_041568127.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:717570-717659:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:718531-718663:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:719663-719799:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:720358-720531:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:721803-722009:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:722198-722272:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:722830-722991:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:724530-724750:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:725671-725803:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:726840-726964:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:728240-728450:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:730918-731127:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:732111-732279:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:732773-732867:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:735095-735298:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:737490-737712:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:739161-739344:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:741115-741286:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:741822-741927:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:742431-742636:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:744689-744913:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:746572-746818:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:748666-748766:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:748868-748972:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:749655-749837:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:750962-751165:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:752369-752555:1:exon