Taeniopygia guttata isolate Blue55 chromosome 30, bTaeGut1.4.pri, whole genome shotgun sequence.
type: Entry
definition: Taeniopygia guttata isolate Blue55 chromosome 30, bTaeGut1.4.pri, whole genome shotgun sequence.
sequence version: NC_044243.2
sequence date: 2021-05-26
sequence: sequence
division: CON
label: NC_044243.2
type: RefSeq
SIO_000068: refseq
dblink: PRJNA558048
dblink: SAMN02981239
keyword: WGS
keyword: RefSeq
source: Taeniopygia guttata (zebra finch)
organism: Taeniopygia guttata
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Taeniopygia.
reference: 1
references: 33911273
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM012111.2.\nOn May 24, 2021 this sequence version replaced NC_044243.1.\nAssembly name: bTaeGut1.4.pri\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2021/05/04. The original whole-genome shotgun project has the\naccession RRCB00000000.2.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 09-APR-2021\nAssembly Method :: FALCON v. 5.1.1; FALCON unzip v.\n Nov2017(uc4); Purge_dups v. 1.0.1;\n Scaff10X v. 4.1.0; Bionano Solve\n BspQI/BssSI v. 3.4; Salsa2 v. 2.2.; Arrow\n polishing v. variantCaller 2.3.3; Merfin\n filtering v. 0.1; longranger align v.\n 2.2.2; freebayes polishing v. 1.3.1;\n gEVAL manual curation v. 2021-04-09; VGP\n pipeline v. 1.7\nAssembly Name :: bTaeGut1.4.pri\nDiploid :: Principal Pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 88.2x\nSequencing Technology :: PacBio RSII; 10X Genomics linked reads;\n Bionano Genomics two enzymes; Arima\n Genomics Hi-C\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Taeniopygia guttata Annotation\n Release 106\nAnnotation Version :: 106\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.6\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 2225416
topology: linear
so has quality: SO_0000987
location: 1..2225416
location: region:1-2225416:1
RO_0002162: 59729

NC_044243
type: RefSeq
SIO_000068: refseq

PRJNA558048
type: BioProject
SIO_000068: bioproject

SAMN02981239
type: BioSample
SIO_000068: biosample

1
title: Towards complete and error-free genome assemblies of all vertebrate species
author: Rhie, A.
author: McCarthy, S.A.
author: Fedrigo, O.
author: Damas, J.
author: Formenti, G.
author: Koren, S.
author: Uliano-Silva, M.
author: Chow, W.
author: Fungtammasan, A.
author: Kim, J.
author: Lee, C.
author: Ko, B.J.
author: Chaisson, M.
author: Gedman, G.L.
author: Cantin, L.J.
author: Thibaud-Nissen, F.
author: Haggerty, L.
author: Bista, I.
author: Smith, M.
author: Haase, B.
author: Mountcastle, J.
author: Winkler, S.
author: Paez, S.
author: Howard, J.
author: Vernes, S.C.
author: Lama, T.M.
author: Grutzner, F.
author: Warren, W.C.
author: Balakrishnan, C.N.
author: Burt, D.
author: George, J.M.
author: Biegler, M.T.
author: Iorns, D.
author: Digby, A.
author: Eason, D.
author: Robertson, B.
author: Edwards, T.
author: Wilkinson, M.
author: Turner, G.
author: Meyer, A.
author: Kautt, A.F.
author: Franchini, P.
author: Detrich, H.W. 3rd
author: Svardal, H.
author: Wagner, M.
author: Naylor, G.J.P.
author: Pippel, M.
author: Malinsky, M.
author: Mooney, M.
author: Simbirsky, M.
author: Hannigan, B.T.
author: Pesout, T.
author: Houck, M.
author: Misuraca, A.
author: Kingan, S.B.
author: Hall, R.
author: Kronenberg, Z.
author: Sovic, I.
author: Dunn, C.
author: Ning, Z.
author: Hastie, A.
author: Lee, J.
author: Selvaraj, S.
author: Green, R.E.
author: Putnam, N.H.
author: Gut, I.
author: Ghurye, J.
author: Garrison, E.
author: Sims, Y.
author: Collins, J.
author: Pelan, S.
author: Torrance, J.
author: Tracey, A.
author: Wood, J.
author: Dagnew, R.E.
author: Guan, D.
author: London, S.E.
author: Clayton, D.F.

33911273
type: PubMed
SIO_000068: pubmed

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2225416:1
position: 2225416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-2225416:1:source
so part of: sequence
organism: Taeniopygia guttata
mol type: genomic DNA
isolate: Blue55
chromosome: 30
sex: female
tissue type: Muscle, blood, brain
dev stage: adult
country: USA
lat lon: 36.0014 N 78.9382 W
collected by: Matt Biegler, Duke University and Rockefeller University

59729
type: Taxonomy
SIO_000068: taxonomy

MAN2B1
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: MAN2B1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2915..9544
location: region:2915-9544:1
so has part: feature:2915-9544:1:exon
subclass of: SO_0000010

121468324
type: Gene
SIO_000068: ncbigene

position:2915:1
position: 2915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9544:1
position: 9544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2915-9544:1:exon

MAN2B1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: MAN2B1
product: mannosidase alpha class 2B member 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 75 samples with support for all annotated introns
transcript id: XM_041711777.1
SIO_010081: MAN2B1
subclass of: SO_0000673
so part of: MAN2B1
location: join(2915..3024,3360..3462,3801..3974,4357..4550,4767..4898,5246..5388,5561..5677,5756..5838,5908..6028,6119..6197,6274..6383,6487..6594,6681..6797,6891..7082,7229..7326,7409..7526,7607..7725,7805..7906,7988..8075,8259..8339,8413..8628,8726..8875,9199..9301,9371..9544)
location: region:2915-9544:1
so has part: feature:2915-3024:1:exon
so has part: feature:3360-3462:1:exon
so has part: feature:3801-3974:1:exon
so has part: feature:4357-4550:1:exon
so has part: feature:4767-4898:1:exon
so has part: feature:5246-5388:1:exon
so has part: feature:5561-5677:1:exon
so has part: feature:5756-5838:1:exon
so has part: feature:5908-6028:1:exon
so has part: feature:6119-6197:1:exon
so has part: feature:6274-6383:1:exon
so has part: feature:6487-6594:1:exon
so has part: feature:6681-6797:1:exon
so has part: feature:6891-7082:1:exon
so has part: feature:7229-7326:1:exon
so has part: feature:7409-7526:1:exon
so has part: feature:7607-7725:1:exon
so has part: feature:7805-7906:1:exon
so has part: feature:7988-8075:1:exon
so has part: feature:8259-8339:1:exon
so has part: feature:8413-8628:1:exon
so has part: feature:8726-8875:1:exon
so has part: feature:9199-9301:1:exon
so has part: feature:9371-9544:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2915-3024:1:exon

position:3024:1
position: 3024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3360-3462:1:exon

position:3360:1
position: 3360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3462:1
position: 3462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3801-3974:1:exon

position:3801:1
position: 3801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3974:1
position: 3974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4357-4550:1:exon

position:4357:1
position: 4357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4550:1
position: 4550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4767-4898:1:exon

position:4767:1
position: 4767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4898:1
position: 4898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5246-5388:1:exon

position:5246:1
position: 5246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5388:1
position: 5388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5561-5677:1:exon

position:5561:1
position: 5561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5677:1
position: 5677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5756-5838:1:exon

position:5756:1
position: 5756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5838:1
position: 5838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5908-6028:1:exon

position:5908:1
position: 5908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6028:1
position: 6028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6119-6197:1:exon

position:6119:1
position: 6119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6197:1
position: 6197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6274-6383:1:exon

position:6274:1
position: 6274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6383:1
position: 6383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:6487-6594:1:exon

position:6487:1
position: 6487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6594:1
position: 6594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:6681-6797:1:exon

position:6681:1
position: 6681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6797:1
position: 6797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:6891-7082:1:exon

position:6891:1
position: 6891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7082:1
position: 7082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:7229-7326:1:exon

position:7229:1
position: 7229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7326:1
position: 7326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:7409-7526:1:exon

position:7409:1
position: 7409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7526:1
position: 7526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:7607-7725:1:exon

position:7607:1
position: 7607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7725:1
position: 7725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:7805-7906:1:exon

position:7805:1
position: 7805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7906:1
position: 7906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:7988-8075:1:exon

position:7988:1
position: 7988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8075:1
position: 8075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:8259-8339:1:exon

position:8259:1
position: 8259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8339:1
position: 8339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:8413-8628:1:exon

position:8413:1
position: 8413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8628:1
position: 8628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:8726-8875:1:exon

position:8726:1
position: 8726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8875:1
position: 8875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:9199-9301:1:exon

position:9199:1
position: 9199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9301:1
position: 9301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:9371-9544:1:exon

position:9371:1
position: 9371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MAN2B1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: MAN2B1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: lysosomal alpha-mannosidase
translation: MALPGAVALPLLLLLLSGAAGCGHQSCSPTRPDMLNVHLVPHSHDDVGWLKTVDQYYYGVRNRDQHAGVQYILDSVVAQLATNPSRRFVYAEVAFLARWWRQQDQATRRLVRELVQEGRLELVGGGWCMSDEAAAHYGAALEQMALGRRFLRRLFGACGMPRVAWQIDPFGHARELAATFAQMGYDGLFVGRVDHQDKWVRLQRRELELLWRGSTSLAPPXADIFTGILPNVYNPPAGLCWDQLCTDPPVVDGDGPERNVDTVVTSFLEAAATQARQYRTNHILMTMGSDFHYENAHLWFKNLDKLIAHANARQANGSRVHALYSTPSCYLWELHRANLTWPLKTDDFFPYSDGPHQFWTGFFSSRPAFKGYERLSSGFLQICSQLEALAGPSARDGPYGPGDSSVLREAVAVAQHHDAVAGTERQHVADDYARQLAKGWDSCQVLVANALSILGGTKEPFIFCNALNISVCPLSETTPHFTVILYNPLAWGVTWPVRLPVRATSYAVTDPQGQPVASQVVPVSGVTRWLRGDTGGAPGELLFQAWAPPLGFSTFEVKQLSPGAPWDPPRWPSGDPEPKLENEHLRIRFDPITGHLLEIQNLAKGFSLPVFQSFYWYNASAGDGLSPQASGAYIFRPNASTPIPVAKRAATRLLKTALVQELHQNFSAWCSQVLRLRPGQPYLELEWTVGPIPVADGLGKEVISRFETPLRTAGRFYTDSNGRQVLERRRDFRPTWNLSQSEPVAGNYYPVNTRIFIKDEKVQLTVLTDRSQGGSSILDGSLELMVHRRLLKDDNRGLGEPLDEPGADGRGLVVRGRHLVLLDTAAAAADQHRPRAQEMVTSPSMVLAPGPGPHLRWFSGLQRALPPSLHLLTVEPRGARAVLLRLEHLFELGESRNGSRPLSVDLTTLFSAFTITSVQEMALGGDIPLHSVSRLLWNTATGTPKPRPLARLDPRRVTLEPMQIRTFLASVRYEGLGEGLGGP
SIO_010081: MAN2B1
subclass of: SO_0000673
so part of: MAN2B1
location: join(2950..3024,3360..3462,3801..3974,4357..4550,4767..4898,5246..5388,5561..5677,5756..5838,5908..6028,6119..6197,6274..6383,6487..6594,6681..6797,6891..7082,7229..7326,7409..7526,7607..7725,7805..7906,7988..8075,8259..8339,8413..8628,8726..8875,9199..9301,9371..9498)
location: region:2950-9498:1
so has part: feature:2950-3024:1:exon
so has part: feature:3360-3462:1:exon
so has part: feature:3801-3974:1:exon
so has part: feature:4357-4550:1:exon
so has part: feature:4767-4898:1:exon
so has part: feature:5246-5388:1:exon
so has part: feature:5561-5677:1:exon
so has part: feature:5756-5838:1:exon
so has part: feature:5908-6028:1:exon
so has part: feature:6119-6197:1:exon
so has part: feature:6274-6383:1:exon
so has part: feature:6487-6594:1:exon
so has part: feature:6681-6797:1:exon
so has part: feature:6891-7082:1:exon
so has part: feature:7229-7326:1:exon
so has part: feature:7409-7526:1:exon
so has part: feature:7607-7725:1:exon
so has part: feature:7805-7906:1:exon
so has part: feature:7988-8075:1:exon
so has part: feature:8259-8339:1:exon
so has part: feature:8413-8628:1:exon
so has part: feature:8726-8875:1:exon
so has part: feature:9199-9301:1:exon
so has part: feature:9371-9498:1:exon

XP_041567711.1
type: Protein
SIO_000068: ncbiprotein

position:2950:1
position: 2950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9498:1
position: 9498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2950-3024:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3360-3462:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3801-3974:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4357-4550:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4767-4898:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5246-5388:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5561-5677:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5756-5838:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5908-6028:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6119-6197:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6274-6383:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6487-6594:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6681-6797:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6891-7082:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7229-7326:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7409-7526:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7607-7725:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7805-7906:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7988-8075:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:8259-8339:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:8413-8628:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:8726-8875:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:9199-9301:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:9371-9498:1:exon

TRMT1
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: TRMT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(9541..14802)
location: region:9541-14802:-1
so has part: feature:9541-14802:-1:exon
subclass of: SO_0000010

121468325
type: Gene
SIO_000068: ncbigene

position:9541:-1
position: 9541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14802:-1
position: 14802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9541-14802:-1:exon

TRMT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: TRMT1
product: tRNA methyltransferase 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XM_041711780.1
SIO_010081: TRMT1
subclass of: SO_0000673
so part of: TRMT1
location: complement(join(9541..9623,9927..10038,10250..10369,10465..10541,10658..10766,11111..11196,11274..11408,11488..11557,11679..11762,11841..11989,12072..12184,12251..12366,12903..13090,13191..13306,13384..13439,13747..13996,14390..14802))
location: region:9541-14802:-1
so has part: feature:14390-14802:-1:exon
so has part: feature:13747-13996:-1:exon
so has part: feature:13384-13439:-1:exon
so has part: feature:13191-13306:-1:exon
so has part: feature:12903-13090:-1:exon
so has part: feature:12251-12366:-1:exon
so has part: feature:12072-12184:-1:exon
so has part: feature:11841-11989:-1:exon
so has part: feature:11679-11762:-1:exon
so has part: feature:11488-11557:-1:exon
so has part: feature:11274-11408:-1:exon
so has part: feature:11111-11196:-1:exon
so has part: feature:10658-10766:-1:exon
so has part: feature:10465-10541:-1:exon
so has part: feature:10250-10369:-1:exon
so has part: feature:9927-10038:-1:exon
so has part: feature:9541-9623:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14390-14802:-1:exon

position:14390:-1
position: 14390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:13747-13996:-1:exon

position:13747:-1
position: 13747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13996:-1
position: 13996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:13384-13439:-1:exon

position:13384:-1
position: 13384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13439:-1
position: 13439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:13191-13306:-1:exon

position:13191:-1
position: 13191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13306:-1
position: 13306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:12903-13090:-1:exon

position:12903:-1
position: 12903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13090:-1
position: 13090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:12251-12366:-1:exon

position:12251:-1
position: 12251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12366:-1
position: 12366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:12072-12184:-1:exon

position:12072:-1
position: 12072
reference: sequence
type: ReverseStrandPosition
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position:12184:-1
position: 12184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:11841-11989:-1:exon

position:11841:-1
position: 11841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11989:-1
position: 11989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:11679-11762:-1:exon

position:11679:-1
position: 11679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11762:-1
position: 11762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:11488-11557:-1:exon

position:11488:-1
position: 11488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11557:-1
position: 11557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:11274-11408:-1:exon

position:11274:-1
position: 11274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11408:-1
position: 11408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:11111-11196:-1:exon

position:11111:-1
position: 11111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11196:-1
position: 11196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:10658-10766:-1:exon

position:10658:-1
position: 10658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10766:-1
position: 10766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:10465-10541:-1:exon

position:10465:-1
position: 10465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10541:-1
position: 10541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:10250-10369:-1:exon

position:10250:-1
position: 10250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10369:-1
position: 10369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:9927-10038:-1:exon

position:9927:-1
position: 9927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10038:-1
position: 10038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:9541-9623:-1:exon

position:9623:-1
position: 9623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TRMT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: TRMT1
product: tRNA methyltransferase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 52 samples with support for all annotated introns
transcript id: XM_041711779.1
SIO_010081: TRMT1
subclass of: SO_0000673
so part of: TRMT1
location: complement(join(9541..9623,9927..10038,10250..10369,10465..10541,10658..10766,11111..11196,11274..11408,11488..11557,11679..11762,11841..11989,12072..12184,12251..12366,12903..13090,13191..13306,13384..13439,13747..13996,14349..14780))
location: region:9541-14780:-1
so has part: feature:14349-14780:-1:exon
so has part: feature:13747-13996:-1:exon
so has part: feature:13384-13439:-1:exon
so has part: feature:13191-13306:-1:exon
so has part: feature:12903-13090:-1:exon
so has part: feature:12251-12366:-1:exon
so has part: feature:12072-12184:-1:exon
so has part: feature:11841-11989:-1:exon
so has part: feature:11679-11762:-1:exon
so has part: feature:11488-11557:-1:exon
so has part: feature:11274-11408:-1:exon
so has part: feature:11111-11196:-1:exon
so has part: feature:10658-10766:-1:exon
so has part: feature:10465-10541:-1:exon
so has part: feature:10250-10369:-1:exon
so has part: feature:9927-10038:-1:exon
so has part: feature:9541-9623:-1:exon

position:14780:-1
position: 14780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14349-14780:-1:exon

position:14349:-1
position: 14349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:13747-13996:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13384-13439:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13191-13306:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:12903-13090:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:12251-12366:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:12072-12184:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11841-11989:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11679-11762:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11488-11557:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:11274-11408:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:11111-11196:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:10658-10766:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:10465-10541:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:10250-10369:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:9927-10038:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:9541-9623:-1:exon

TRMT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: TRMT1
product: tRNA methyltransferase 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_041711781.1
SIO_010081: TRMT1
subclass of: SO_0000673
so part of: TRMT1
location: complement(join(9541..9623,9927..10038,10250..10369,10465..10541,10658..10766,11111..11196,11274..11408,11488..11557,11679..11762,11841..11989,12072..12184,12251..12366,12903..13090,13191..13306,13384..13439,13747..13996,14418..14779))
location: region:9541-14779:-1
so has part: feature:14418-14779:-1:exon
so has part: feature:13747-13996:-1:exon
so has part: feature:13384-13439:-1:exon
so has part: feature:13191-13306:-1:exon
so has part: feature:12903-13090:-1:exon
so has part: feature:12251-12366:-1:exon
so has part: feature:12072-12184:-1:exon
so has part: feature:11841-11989:-1:exon
so has part: feature:11679-11762:-1:exon
so has part: feature:11488-11557:-1:exon
so has part: feature:11274-11408:-1:exon
so has part: feature:11111-11196:-1:exon
so has part: feature:10658-10766:-1:exon
so has part: feature:10465-10541:-1:exon
so has part: feature:10250-10369:-1:exon
so has part: feature:9927-10038:-1:exon
so has part: feature:9541-9623:-1:exon

position:14779:-1
position: 14779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14418-14779:-1:exon

position:14418:-1
position: 14418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:13747-13996:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13384-13439:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13191-13306:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:12903-13090:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:12251-12366:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:12072-12184:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11841-11989:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11679-11762:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11488-11557:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:11274-11408:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:11111-11196:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:10658-10766:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:10465-10541:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:10250-10369:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:9927-10038:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:9541-9623:-1:exon

TRMT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: TRMT1
product: tRNA methyltransferase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_041711778.1
SIO_010081: TRMT1
subclass of: SO_0000673
so part of: TRMT1
location: complement(join(9541..9623,9927..10038,10250..10369,10465..10541,10658..10766,11111..11196,11274..11408,11488..11557,11679..11762,11841..11989,12072..12184,12251..12366,12903..13090,13191..13306,13384..13439,13747..13996,14159..14338))
location: region:9541-14338:-1
so has part: feature:14159-14338:-1:exon
so has part: feature:13747-13996:-1:exon
so has part: feature:13384-13439:-1:exon
so has part: feature:13191-13306:-1:exon
so has part: feature:12903-13090:-1:exon
so has part: feature:12251-12366:-1:exon
so has part: feature:12072-12184:-1:exon
so has part: feature:11841-11989:-1:exon
so has part: feature:11679-11762:-1:exon
so has part: feature:11488-11557:-1:exon
so has part: feature:11274-11408:-1:exon
so has part: feature:11111-11196:-1:exon
so has part: feature:10658-10766:-1:exon
so has part: feature:10465-10541:-1:exon
so has part: feature:10250-10369:-1:exon
so has part: feature:9927-10038:-1:exon
so has part: feature:9541-9623:-1:exon

position:14338:-1
position: 14338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14159-14338:-1:exon

position:14159:-1
position: 14159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:13747-13996:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13384-13439:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13191-13306:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:12903-13090:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:12251-12366:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:12072-12184:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11841-11989:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11679-11762:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11488-11557:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:11274-11408:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:11111-11196:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:10658-10766:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:10465-10541:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:10250-10369:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:9927-10038:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:9541-9623:-1:exon

TRMT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: TRMT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA (guanine(26)-N(2))-dimethyltransferase isoform X2
translation: MRGAARAAAALSTLCRRPPVPPTMDGASPNGLATPPSSGAAQEGSAGPPQSEEGAPGSGETLITEGRATIVFPSANEVFYNPVQGFNRDLTCAVLTEFARLQLRPKGIQVILPGEEELGESPQSPPEAGDPPTAPETPRTARPGEPCEGGLRVLEALAASGLRSVRFAREVPGLGAVVASDCSPRAVELMARNVARNGVGGLVTPRLADARMLMYQRKAQREPFDVIDLDPYGSPAPFLDAAVQAVSEGGLLCVTCTDMAVMAGNSAETCYSKYGAVSLKGKFCHEMALRIILHSLDLRANCYQRFVVPLLSVSADFYVRVFVRVFTGQAKVKASASKQALVFHCMGCGSHHLQRLGRATSHGSGFKYSAATGPPVGPTCEFCQQRHQVGGPVWAEPLHDPAFVKGVLAALERSPGRFSTEPRMRGMLSVIAEELSDVPLYYTLDGLSSTIRSNTPSLLQLRSALLHAGFRVSLSHACRNAVKTDAPPAVLWDIMRCWAKLHPVKWERLPDSSPAARILAVEPTLQASFALHEDANPSSRKRGLKRFPENPEAFWGPKARAKPGGGIAPSLQEKRERLQNKRTQRPDGAGLKQFPCKRFKEGTCPQGEKCCYSHEPALAAPN
SIO_010081: TRMT1
subclass of: SO_0000673
so part of: TRMT1
location: complement(join(9558..9623,9927..10038,10250..10369,10465..10541,10658..10766,11111..11196,11274..11408,11488..11557,11679..11762,11841..11989,12072..12184,12251..12366,12903..13090,13191..13306,13384..13439,13747..13996,14349..14370))
location: region:9558-14370:-1
so has part: feature:14349-14370:-1:exon
so has part: feature:13747-13996:-1:exon
so has part: feature:13384-13439:-1:exon
so has part: feature:13191-13306:-1:exon
so has part: feature:12903-13090:-1:exon
so has part: feature:12251-12366:-1:exon
so has part: feature:12072-12184:-1:exon
so has part: feature:11841-11989:-1:exon
so has part: feature:11679-11762:-1:exon
so has part: feature:11488-11557:-1:exon
so has part: feature:11274-11408:-1:exon
so has part: feature:11111-11196:-1:exon
so has part: feature:10658-10766:-1:exon
so has part: feature:10465-10541:-1:exon
so has part: feature:10250-10369:-1:exon
so has part: feature:9927-10038:-1:exon
so has part: feature:9558-9623:-1:exon

XP_041567713.1
type: Protein
SIO_000068: ncbiprotein

position:9558:-1
position: 9558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14370:-1
position: 14370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14349-14370:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13747-13996:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13384-13439:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13191-13306:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:12903-13090:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:12251-12366:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:12072-12184:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11841-11989:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11679-11762:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11488-11557:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:11274-11408:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:11111-11196:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:10658-10766:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:10465-10541:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:10250-10369:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:9927-10038:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:9558-9623:-1:exon

TRMT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: TRMT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA (guanine(26)-N(2))-dimethyltransferase isoform X1
translation: MDSTGGHGRTPRDGTSRGGLSPPCPAPRHVLGGGAVQRSRFGGEGRGHGTPVTKAAALSTLCRRPPVPPTMDGASPNGLATPPSSGAAQEGSAGPPQSEEGAPGSGETLITEGRATIVFPSANEVFYNPVQGFNRDLTCAVLTEFARLQLRPKGIQVILPGEEELGESPQSPPEAGDPPTAPETPRTARPGEPCEGGLRVLEALAASGLRSVRFAREVPGLGAVVASDCSPRAVELMARNVARNGVGGLVTPRLADARMLMYQRKAQREPFDVIDLDPYGSPAPFLDAAVQAVSEGGLLCVTCTDMAVMAGNSAETCYSKYGAVSLKGKFCHEMALRIILHSLDLRANCYQRFVVPLLSVSADFYVRVFVRVFTGQAKVKASASKQALVFHCMGCGSHHLQRLGRATSHGSGFKYSAATGPPVGPTCEFCQQRHQVGGPVWAEPLHDPAFVKGVLAALERSPGRFSTEPRMRGMLSVIAEELSDVPLYYTLDGLSSTIRSNTPSLLQLRSALLHAGFRVSLSHACRNAVKTDAPPAVLWDIMRCWAKLHPVKWERLPDSSPAARILAVEPTLQASFALHEDANPSSRKRGLKRFPENPEAFWGPKARAKPGGGIAPSLQEKRERLQNKRTQRPDGAGLKQFPCKRFKEGTCPQGEKCCYSHEPALAAPN
SIO_010081: TRMT1
subclass of: SO_0000673
so part of: TRMT1
location: complement(join(9558..9623,9927..10038,10250..10369,10465..10541,10658..10766,11111..11196,11274..11408,11488..11557,11679..11762,11841..11989,12072..12184,12251..12366,12903..13090,13191..13306,13384..13439,13747..13996,14159..14321))
location: region:9558-14321:-1
so has part: feature:14159-14321:-1:exon
so has part: feature:13747-13996:-1:exon
so has part: feature:13384-13439:-1:exon
so has part: feature:13191-13306:-1:exon
so has part: feature:12903-13090:-1:exon
so has part: feature:12251-12366:-1:exon
so has part: feature:12072-12184:-1:exon
so has part: feature:11841-11989:-1:exon
so has part: feature:11679-11762:-1:exon
so has part: feature:11488-11557:-1:exon
so has part: feature:11274-11408:-1:exon
so has part: feature:11111-11196:-1:exon
so has part: feature:10658-10766:-1:exon
so has part: feature:10465-10541:-1:exon
so has part: feature:10250-10369:-1:exon
so has part: feature:9927-10038:-1:exon
so has part: feature:9558-9623:-1:exon

XP_041567712.1
type: Protein
SIO_000068: ncbiprotein

position:14321:-1
position: 14321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14159-14321:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13747-13996:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13384-13439:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13191-13306:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:12903-13090:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:12251-12366:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:12072-12184:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11841-11989:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11679-11762:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11488-11557:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:11274-11408:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:11111-11196:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:10658-10766:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:10465-10541:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:10250-10369:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:9927-10038:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:9558-9623:-1:exon

TRMT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: TRMT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA (guanine(26)-N(2))-dimethyltransferase isoform X3
translation: MDGASPNGLATPPSSGAAQEGSAGPPQSEEGAPGSGETLITEGRATIVFPSANEVFYNPVQGFNRDLTCAVLTEFARLQLRPKGIQVILPGEEELGESPQSPPEAGDPPTAPETPRTARPGEPCEGGLRVLEALAASGLRSVRFAREVPGLGAVVASDCSPRAVELMARNVARNGVGGLVTPRLADARMLMYQRKAQREPFDVIDLDPYGSPAPFLDAAVQAVSEGGLLCVTCTDMAVMAGNSAETCYSKYGAVSLKGKFCHEMALRIILHSLDLRANCYQRFVVPLLSVSADFYVRVFVRVFTGQAKVKASASKQALVFHCMGCGSHHLQRLGRATSHGSGFKYSAATGPPVGPTCEFCQQRHQVGGPVWAEPLHDPAFVKGVLAALERSPGRFSTEPRMRGMLSVIAEELSDVPLYYTLDGLSSTIRSNTPSLLQLRSALLHAGFRVSLSHACRNAVKTDAPPAVLWDIMRCWAKLHPVKWERLPDSSPAARILAVEPTLQASFALHEDANPSSRKRGLKRFPENPEAFWGPKARAKPGGGIAPSLQEKRERLQNKRTQRPDGAGLKQFPCKRFKEGTCPQGEKCCYSHEPALAAPN
SIO_010081: TRMT1
subclass of: SO_0000673
so part of: TRMT1
location: complement(join(9558..9623,9927..10038,10250..10369,10465..10541,10658..10766,11111..11196,11274..11408,11488..11557,11679..11762,11841..11989,12072..12184,12251..12366,12903..13090,13191..13306,13384..13439,13747..13949))
location: region:9558-13949:-1
so has part: feature:13747-13949:-1:exon
so has part: feature:13384-13439:-1:exon
so has part: feature:13191-13306:-1:exon
so has part: feature:12903-13090:-1:exon
so has part: feature:12251-12366:-1:exon
so has part: feature:12072-12184:-1:exon
so has part: feature:11841-11989:-1:exon
so has part: feature:11679-11762:-1:exon
so has part: feature:11488-11557:-1:exon
so has part: feature:11274-11408:-1:exon
so has part: feature:11111-11196:-1:exon
so has part: feature:10658-10766:-1:exon
so has part: feature:10465-10541:-1:exon
so has part: feature:10250-10369:-1:exon
so has part: feature:9927-10038:-1:exon
so has part: feature:9558-9623:-1:exon

XP_041567714.1
type: Protein
SIO_000068: ncbiprotein

position:13949:-1
position: 13949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13747-13949:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13384-13439:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13191-13306:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12903-13090:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:12251-12366:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:12072-12184:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11841-11989:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11679-11762:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11488-11557:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11274-11408:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:11111-11196:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:10658-10766:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:10465-10541:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:10250-10369:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:9927-10038:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:9558-9623:-1:exon

TRMT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: TRMT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA (guanine(26)-N(2))-dimethyltransferase isoform X3
translation: MDGASPNGLATPPSSGAAQEGSAGPPQSEEGAPGSGETLITEGRATIVFPSANEVFYNPVQGFNRDLTCAVLTEFARLQLRPKGIQVILPGEEELGESPQSPPEAGDPPTAPETPRTARPGEPCEGGLRVLEALAASGLRSVRFAREVPGLGAVVASDCSPRAVELMARNVARNGVGGLVTPRLADARMLMYQRKAQREPFDVIDLDPYGSPAPFLDAAVQAVSEGGLLCVTCTDMAVMAGNSAETCYSKYGAVSLKGKFCHEMALRIILHSLDLRANCYQRFVVPLLSVSADFYVRVFVRVFTGQAKVKASASKQALVFHCMGCGSHHLQRLGRATSHGSGFKYSAATGPPVGPTCEFCQQRHQVGGPVWAEPLHDPAFVKGVLAALERSPGRFSTEPRMRGMLSVIAEELSDVPLYYTLDGLSSTIRSNTPSLLQLRSALLHAGFRVSLSHACRNAVKTDAPPAVLWDIMRCWAKLHPVKWERLPDSSPAARILAVEPTLQASFALHEDANPSSRKRGLKRFPENPEAFWGPKARAKPGGGIAPSLQEKRERLQNKRTQRPDGAGLKQFPCKRFKEGTCPQGEKCCYSHEPALAAPN
SIO_010081: TRMT1
subclass of: SO_0000673
so part of: TRMT1
location: complement(join(9558..9623,9927..10038,10250..10369,10465..10541,10658..10766,11111..11196,11274..11408,11488..11557,11679..11762,11841..11989,12072..12184,12251..12366,12903..13090,13191..13306,13384..13439,13747..13949))
location: region:9558-13949:-1
so has part: feature:13747-13949:-1:exon
so has part: feature:13384-13439:-1:exon
so has part: feature:13191-13306:-1:exon
so has part: feature:12903-13090:-1:exon
so has part: feature:12251-12366:-1:exon
so has part: feature:12072-12184:-1:exon
so has part: feature:11841-11989:-1:exon
so has part: feature:11679-11762:-1:exon
so has part: feature:11488-11557:-1:exon
so has part: feature:11274-11408:-1:exon
so has part: feature:11111-11196:-1:exon
so has part: feature:10658-10766:-1:exon
so has part: feature:10465-10541:-1:exon
so has part: feature:10250-10369:-1:exon
so has part: feature:9927-10038:-1:exon
so has part: feature:9558-9623:-1:exon

XP_041567715.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13747-13949:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13384-13439:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13191-13306:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12903-13090:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:12251-12366:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:12072-12184:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11841-11989:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11679-11762:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11488-11557:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11274-11408:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:11111-11196:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:10658-10766:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:10465-10541:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:10250-10369:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:9927-10038:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:9558-9623:-1:exon

NACC1
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: NACC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 15861..19978
location: region:15861-19978:1
so has part: feature:15861-19978:1:exon
subclass of: SO_0000010

121468341
type: Gene
SIO_000068: ncbigene

position:15861:1
position: 15861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19978:1
position: 19978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15861-19978:1:exon

NACC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: NACC1
product: nucleus accumbens associated 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 97 samples with support for all annotated introns
transcript id: XM_041711842.1
SIO_010081: NACC1
subclass of: SO_0000673
so part of: NACC1
location: join(15861..16795,17057..17233,17316..17421,17512..17609,17955..19978)
location: region:15861-19978:1
so has part: feature:15861-16795:1:exon
so has part: feature:17057-17233:1:exon
so has part: feature:17316-17421:1:exon
so has part: feature:17512-17609:1:exon
so has part: feature:17955-19978:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15861-16795:1:exon

position:16795:1
position: 16795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:17057-17233:1:exon

position:17057:1
position: 17057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17233:1
position: 17233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:17316-17421:1:exon

position:17316:1
position: 17316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17421:1
position: 17421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:17512-17609:1:exon

position:17512:1
position: 17512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17609:1
position: 17609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:17955-19978:1:exon

position:17955:1
position: 17955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NACC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: NACC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleus accumbens-associated protein 1
translation: MAQTLQMEIPNFGNSILECLNEQRLQGLFCDVSVVVKGHAFKAHRAVLAASSSYFRDLFHSSKSAVVELPAAVQPQSFQQILSFCYTGRLSMNVGDQFLLMYTAGFLQIQEIMEKGTEFFLKVSSPSCDSQGLHGDDTPGSEPQSPVAQTSAAQGWAAALPLVSRVKTEQGEPDGVQCTFVVKRLWDGAAKDAGGNGSRKMAKFSEAAPRPPQPPGTGTGAGGGGAAPAPAPAPAPGTAADQTSPGGTSSAYTSDSPGSFHNEEDEEEDAGEEGSDEQYRQICNMYTMYSMMNVGPAAAEKVEALPEQPPPEPRARARLRQDLASLPAELVTQIGNRCHPKLYDEGDPAEKLELVTGTNVYITRAQLMNCHVSAGTRHKVLLRRLLASFFDRNTLANSCGTGIRSSTNDPSRKPLDSRVLHAVKFYCQNFAPNFKESEMNAIAADMCTNARRVVRKSWIPKLKLLMAEGDSYTSFINDTGKLEPDIMGPEPPFEAGGPEPEGGPAGEGLQ
SIO_010081: NACC1
subclass of: SO_0000673
so part of: NACC1
location: join(15904..16795,17057..17233,17316..17421,17512..17609,17955..18214)
location: region:15904-18214:1
so has part: feature:15904-16795:1:exon
so has part: feature:17057-17233:1:exon
so has part: feature:17316-17421:1:exon
so has part: feature:17512-17609:1:exon
so has part: feature:17955-18214:1:exon

XP_041567776.1
type: Protein
SIO_000068: ncbiprotein

position:15904:1
position: 15904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18214:1
position: 18214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15904-16795:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:17057-17233:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:17316-17421:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:17512-17609:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:17955-18214:1:exon

IER2
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: IER2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 20653..22542
location: region:20653-22542:1
so has part: feature:20653-22542:1:exon
subclass of: SO_0000010

121468268
type: Gene
SIO_000068: ncbigene

position:20653:1
position: 20653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22542:1
position: 22542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20653-22542:1:exon

IER2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: IER2
product: immediate early response 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041711643.1
SIO_010081: IER2
subclass of: SO_0000673
so part of: IER2
location: 20653..22542
location: region:20653-22542:1
so has part: feature:20653-22542:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:20653-22542:1:exon

IER2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: IER2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: immediate early response gene 2 protein
translation: MWGDTETPSHSTGIPAPLGARSPPGPVSVPGATETRLSRRGAGCGGGGGGGPGAVPGPDAVAGGPRGGQAGTRSAAGPSRSTRSEDAMEEAQRLLTVSVWKLYRCRLRRGGLRLHRSLQLSLLVRAARHRYLSARAAAETLPGPEPAGAAAGGATPEAGSDPSGDPRCPNTPSADRLSPCSHRTDPSGDPRCPNTPSADRPSPWSPRTDPSGELRCPNTPSADRPSPRTEQERGNPLRHWSGDHPTLPSGARRSERHRGCLPGRPTEDSPSPPAGDSPAPPTAELRPAPDPANRDRDLLPTADPRAARDPANWDPPSAAPGPPRPTGAPRAGQKRRSSGSAGPGRGPVPSKRARLEAEAPPLPPGPPGRCSGPPAAAFGFLVRAVGAC
SIO_010081: IER2
subclass of: SO_0000673
so part of: IER2
location: 20765..21931
location: region:20765-21931:1
so has part: feature:20765-21931:1:exon

XP_041567577.1
type: Protein
SIO_000068: ncbiprotein

position:20765:1
position: 20765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21931:1
position: 21931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20765-21931:1:exon

CACNA1A
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: CACNA1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(23192..55590)
location: region:23192-55590:-1
so has part: feature:23192-55590:-1:exon
subclass of: SO_0000010

121468269
type: Gene
SIO_000068: ncbigene

position:23192:-1
position: 23192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:55590:-1
position: 55590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23192-55590:-1:exon

CACNA1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: CACNA1A
product: calcium voltage-gated channel subunit alpha1 A
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 77 samples with support for all annotated introns
transcript id: XM_041711644.1
SIO_010081: CACNA1A
subclass of: SO_0000673
so part of: CACNA1A
location: complement(join(23192..24038,25791..26057,26590..26788,27932..27967,28517..28627,28733..28871,28942..29033,29387..29487,29558..29665,29880..29985,31716..31812,35005..35132,35566..35716,36023..36123,36243..36308,36391..36507,36611..36694,36958..37068,37347..37511,37604..37805,37883..38023,38092..38252,38339..38438,39633..39739,39832..39891,40073..40202,40457..40598,41170..41531,41742..42470,42846..42952,43028..43095,43201..43318,43421..43493,43633..43764,43934..44046,44468..44580,45374..45583,46115..46204,46334..46390,46918..47033,47622..47725,48003..48190,48851..49003,49127..49218,50725..50864,51265..51370,54294..55590))
location: region:23192-55590:-1
so has part: feature:54294-55590:-1:exon
so has part: feature:51265-51370:-1:exon
so has part: feature:50725-50864:-1:exon
so has part: feature:49127-49218:-1:exon
so has part: feature:48851-49003:-1:exon
so has part: feature:48003-48190:-1:exon
so has part: feature:47622-47725:-1:exon
so has part: feature:46918-47033:-1:exon
so has part: feature:46334-46390:-1:exon
so has part: feature:46115-46204:-1:exon
so has part: feature:45374-45583:-1:exon
so has part: feature:44468-44580:-1:exon
so has part: feature:43934-44046:-1:exon
so has part: feature:43633-43764:-1:exon
so has part: feature:43421-43493:-1:exon
so has part: feature:43201-43318:-1:exon
so has part: feature:43028-43095:-1:exon
so has part: feature:42846-42952:-1:exon
so has part: feature:41742-42470:-1:exon
so has part: feature:41170-41531:-1:exon
so has part: feature:40457-40598:-1:exon
so has part: feature:40073-40202:-1:exon
so has part: feature:39832-39891:-1:exon
so has part: feature:39633-39739:-1:exon
so has part: feature:38339-38438:-1:exon
so has part: feature:38092-38252:-1:exon
so has part: feature:37883-38023:-1:exon
so has part: feature:37604-37805:-1:exon
so has part: feature:37347-37511:-1:exon
so has part: feature:36958-37068:-1:exon
so has part: feature:36611-36694:-1:exon
so has part: feature:36391-36507:-1:exon
so has part: feature:36243-36308:-1:exon
so has part: feature:36023-36123:-1:exon
so has part: feature:35566-35716:-1:exon
so has part: feature:35005-35132:-1:exon
so has part: feature:31716-31812:-1:exon
so has part: feature:29880-29985:-1:exon
so has part: feature:29558-29665:-1:exon
so has part: feature:29387-29487:-1:exon
so has part: feature:28942-29033:-1:exon
so has part: feature:28733-28871:-1:exon
so has part: feature:28517-28627:-1:exon
so has part: feature:27932-27967:-1:exon
so has part: feature:26590-26788:-1:exon
so has part: feature:25791-26057:-1:exon
so has part: feature:23192-24038:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:54294-55590:-1:exon

position:54294:-1
position: 54294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:51265-51370:-1:exon

position:51265:-1
position: 51265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51370:-1
position: 51370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:50725-50864:-1:exon

position:50725:-1
position: 50725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:50864:-1
position: 50864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:49127-49218:-1:exon

position:49127:-1
position: 49127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49218:-1
position: 49218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:48851-49003:-1:exon

position:48851:-1
position: 48851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49003:-1
position: 49003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:48003-48190:-1:exon

position:48003:-1
position: 48003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48190:-1
position: 48190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:47622-47725:-1:exon

position:47622:-1
position: 47622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:47725:-1
position: 47725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:46918-47033:-1:exon

position:46918:-1
position: 46918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:47033:-1
position: 47033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:46334-46390:-1:exon

position:46334:-1
position: 46334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46390:-1
position: 46390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:46115-46204:-1:exon

position:46115:-1
position: 46115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46204:-1
position: 46204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:45374-45583:-1:exon

position:45374:-1
position: 45374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45583:-1
position: 45583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:44468-44580:-1:exon

position:44468:-1
position: 44468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44580:-1
position: 44580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:43934-44046:-1:exon

position:43934:-1
position: 43934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44046:-1
position: 44046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:43633-43764:-1:exon

position:43633:-1
position: 43633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43764:-1
position: 43764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:43421-43493:-1:exon

position:43421:-1
position: 43421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43493:-1
position: 43493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:43201-43318:-1:exon

position:43201:-1
position: 43201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43318:-1
position: 43318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:43028-43095:-1:exon

position:43028:-1
position: 43028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43095:-1
position: 43095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:42846-42952:-1:exon

position:42846:-1
position: 42846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42952:-1
position: 42952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:41742-42470:-1:exon

position:41742:-1
position: 41742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42470:-1
position: 42470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:41170-41531:-1:exon

position:41170:-1
position: 41170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41531:-1
position: 41531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:40457-40598:-1:exon

position:40457:-1
position: 40457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:40598:-1
position: 40598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:40073-40202:-1:exon

position:40073:-1
position: 40073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:40202:-1
position: 40202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:39832-39891:-1:exon

position:39832:-1
position: 39832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39891:-1
position: 39891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:39633-39739:-1:exon

position:39633:-1
position: 39633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39739:-1
position: 39739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:38339-38438:-1:exon

position:38339:-1
position: 38339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38438:-1
position: 38438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:38092-38252:-1:exon

position:38092:-1
position: 38092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38252:-1
position: 38252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:37883-38023:-1:exon

position:37883:-1
position: 37883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38023:-1
position: 38023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:37604-37805:-1:exon

position:37604:-1
position: 37604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37805:-1
position: 37805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:37347-37511:-1:exon

position:37347:-1
position: 37347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37511:-1
position: 37511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:36958-37068:-1:exon

position:36958:-1
position: 36958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37068:-1
position: 37068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:36611-36694:-1:exon

position:36611:-1
position: 36611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:36694:-1
position: 36694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:36391-36507:-1:exon

position:36391:-1
position: 36391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:36507:-1
position: 36507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:36243-36308:-1:exon

position:36243:-1
position: 36243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:36308:-1
position: 36308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:36023-36123:-1:exon

position:36023:-1
position: 36023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:36123:-1
position: 36123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:35566-35716:-1:exon

position:35566:-1
position: 35566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35716:-1
position: 35716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:35005-35132:-1:exon

position:35005:-1
position: 35005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35132:-1
position: 35132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:31716-31812:-1:exon

position:31716:-1
position: 31716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31812:-1
position: 31812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:29880-29985:-1:exon

position:29880:-1
position: 29880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29985:-1
position: 29985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:29558-29665:-1:exon

position:29558:-1
position: 29558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29665:-1
position: 29665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:29387-29487:-1:exon

position:29387:-1
position: 29387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29487:-1
position: 29487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:28942-29033:-1:exon

position:28942:-1
position: 28942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29033:-1
position: 29033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 42
SIO_000628: feature:28733-28871:-1:exon

position:28733:-1
position: 28733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28871:-1
position: 28871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 43
SIO_000628: feature:28517-28627:-1:exon

position:28517:-1
position: 28517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28627:-1
position: 28627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 44
SIO_000628: feature:27932-27967:-1:exon

position:27932:-1
position: 27932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27967:-1
position: 27967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 45
SIO_000628: feature:26590-26788:-1:exon

position:26590:-1
position: 26590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26788:-1
position: 26788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 46
SIO_000628: feature:25791-26057:-1:exon

position:25791:-1
position: 25791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26057:-1
position: 26057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 47
SIO_000628: feature:23192-24038:-1:exon

position:24038:-1
position: 24038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CACNA1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: CACNA1A
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: voltage-dependent P/Q-type calcium channel subunit alpha-1A
translation: MARFGEEAAARYGPGGGGSGPGAXGGGPGSGGGGPRQGPPGAQRLYKQSMAQRARTMALYNPIPVRQNCLTVNRSLFLFSEDNVVRKYAKKITEWPPFEYMILATIIANCIVLALEQHLPDEDKTPMSERLDDTEPYFIGIFCFEAGIKIIALGFAFHKGSYLRNGWNVMDFVVVLTGILASVGSQFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMIPLLQIGLLLFFAILIFAIIGLEFYMGKFHTTCFDLVTDEIKVEVPCGTDEPARICPNGTKCKKYWEGPNYGITQFDNILFAVLTVFQCITMEGWTDLLYYSNDASGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVENRRAFLKLRRQQQIERELNGYMEWISKAEEVILAEDEPEAEPRRPFDALRRATSKRSKTDLLSPEEGEEQLGDIAAMGSPFARASLKSAKLENATFFHKRERRMRFHIRRMVKTQAFYWTVLSLVALNTLCVAIVHYDQPDWLSDFLYYAEFIFLGLFMSEMFIKMYGLGTRPYFHSSFNCFDCAVIIGSIFEVIWAVVKPGTSFGISVLRALRLLRIFKVTKYWASLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFDDGTPPTNFDTFPAAIMTVFQILTGEDWNAVMYDGIKSQGGVKGGMVFSVYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDEQEEEEAANQKLALQKAKEVAEVSPLSAANMSVTMKEQQKNQKSSKSVWEQRTSELRKQNLLASREALYSELDPEERWKVPYARHLRPDMKTHLDRPLVVDPQENRNNNTNKTRPGEPPGEPRFGPLRAEEPRRQQPPRYPEHGGGPRPAEPPAGPPGGRRPRSSSRDPEREPSPERGYGDGERPKARHRSRDGRAGSPPEREHRRHRGHRRAPEEGEEGARPERRPRHREGGRPPRGEGDGEHGDGERRRRHRHGPPPGYDGEGRRDDKERRHRRRRETQPPPAPSGPTLSTTRPIQQDMGRRDPPVAEDIDNMKNNKLATAEPPAPRSVGNHTPCPPAGPPRRPPPTANPPPPENSLVGTNPGPPNNPSKGGGKPEHTAVDIPPPFPPPPSNALVQVNRNANPEPLPRKEEEEKKEEEGDGQDENGPKPMVPYSSMFILSTTNPFRRLCHYIVNLRYFEMCILMVIAMSSIALAAEDPVQPNAPRNNVLRYFDYVFTGVFTFEMVIKMVDLGLVLHQGSYFRDLWNILDFIVVSGALVAFAFTGSSKGKDINTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVVAVQLFKGKFFYCTDESKEFEKDCRGEYLVYEKDNEVKAQKREWKKYEFHYDNVLWALLTLFTVSTGEGWPQVLKHSVDATYENQGPSPGYRMEMSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKMMEEYSLEKNERACIDFAISAKPLTRHMPQNRQSFQYRMWQFVVSPPFEYTIMAMIALNTIVLMMKFYDASDTYENVLKMFNNVFTSLFSLECLLKIMAFGVLNYFRDAWNVFDFVTVLGSITDILVTEFGNNFINLSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIGIEEEDDESAITQHNNFRTFFQALMLLFRSATGEAWHEIMLSCLSGKPCDENSGIKEDECGNEFAYFYFVSFIFLCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEYVRVWAEYDPAAWGRLTLADMYEMLRHMSPPLGLGTSCPPRVAYKRLLRMDLPVADDNTVHFNSTLMALIRTALDIKIAKGGADKQQMDAELRKEMIAIWPNLSPKNLDLLVTPHKSTDLTVGKIYAAMMIMEYYRQSKAKKLQAMREEQNRTPLMFQRMEPPSPTQEGPPGPDAASAAEPPARDGDMKESQSWVTQRAQEMFQRTGTWSPERGHPDDVPNSRPNSQLVEMREMPKDG…
SIO_010081: CACNA1A
subclass of: SO_0000673
so part of: CACNA1A
location: complement(join(23586..24038,25791..26057,26590..26788,27932..27967,28517..28627,28733..28871,28942..29033,29387..29487,29558..29665,29880..29985,31716..31812,35005..35132,35566..35716,36023..36123,36243..36308,36391..36507,36611..36694,36958..37068,37347..37511,37604..37805,37883..38023,38092..38252,38339..38438,39633..39739,39832..39891,40073..40202,40457..40598,41170..41531,41742..42470,42846..42952,43028..43095,43201..43318,43421..43493,43633..43764,43934..44046,44468..44580,45374..45583,46115..46204,46334..46390,46918..47033,47622..47725,48003..48190,48851..49003,49127..49218,50725..50864,51265..51370,54294..54579))
location: region:23586-54579:-1
so has part: feature:54294-54579:-1:exon
so has part: feature:51265-51370:-1:exon
so has part: feature:50725-50864:-1:exon
so has part: feature:49127-49218:-1:exon
so has part: feature:48851-49003:-1:exon
so has part: feature:48003-48190:-1:exon
so has part: feature:47622-47725:-1:exon
so has part: feature:46918-47033:-1:exon
so has part: feature:46334-46390:-1:exon
so has part: feature:46115-46204:-1:exon
so has part: feature:45374-45583:-1:exon
so has part: feature:44468-44580:-1:exon
so has part: feature:43934-44046:-1:exon
so has part: feature:43633-43764:-1:exon
so has part: feature:43421-43493:-1:exon
so has part: feature:43201-43318:-1:exon
so has part: feature:43028-43095:-1:exon
so has part: feature:42846-42952:-1:exon
so has part: feature:41742-42470:-1:exon
so has part: feature:41170-41531:-1:exon
so has part: feature:40457-40598:-1:exon
so has part: feature:40073-40202:-1:exon
so has part: feature:39832-39891:-1:exon
so has part: feature:39633-39739:-1:exon
so has part: feature:38339-38438:-1:exon
so has part: feature:38092-38252:-1:exon
so has part: feature:37883-38023:-1:exon
so has part: feature:37604-37805:-1:exon
so has part: feature:37347-37511:-1:exon
so has part: feature:36958-37068:-1:exon
so has part: feature:36611-36694:-1:exon
so has part: feature:36391-36507:-1:exon
so has part: feature:36243-36308:-1:exon
so has part: feature:36023-36123:-1:exon
so has part: feature:35566-35716:-1:exon
so has part: feature:35005-35132:-1:exon
so has part: feature:31716-31812:-1:exon
so has part: feature:29880-29985:-1:exon
so has part: feature:29558-29665:-1:exon
so has part: feature:29387-29487:-1:exon
so has part: feature:28942-29033:-1:exon
so has part: feature:28733-28871:-1:exon
so has part: feature:28517-28627:-1:exon
so has part: feature:27932-27967:-1:exon
so has part: feature:26590-26788:-1:exon
so has part: feature:25791-26057:-1:exon
so has part: feature:23586-24038:-1:exon

XP_041567578.1
type: Protein
SIO_000068: ncbiprotein

position:23586:-1
position: 23586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54579:-1
position: 54579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54294-54579:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:51265-51370:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:50725-50864:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:49127-49218:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:48851-49003:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:48003-48190:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:47622-47725:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:46918-47033:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:46334-46390:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:46115-46204:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:45374-45583:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:44468-44580:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:43934-44046:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:43633-43764:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:43421-43493:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:43201-43318:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:43028-43095:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:42846-42952:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:41742-42470:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:41170-41531:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:40457-40598:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:40073-40202:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:39832-39891:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:39633-39739:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:38339-38438:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:38092-38252:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:37883-38023:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:37604-37805:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:37347-37511:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:36958-37068:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:36611-36694:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:36391-36507:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:36243-36308:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:36023-36123:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:35566-35716:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:35005-35132:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:31716-31812:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:29880-29985:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:29558-29665:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:29387-29487:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:28942-29033:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:28733-28871:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:28517-28627:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:27932-27967:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:26590-26788:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:25791-26057:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:23586-24038:-1:exon

YJU2B
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: YJU2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 57756..62302
location: region:57756-62302:1
so has part: feature:57756-62302:1:exon
subclass of: SO_0000010

121468330
type: Gene
SIO_000068: ncbigene

position:57756:1
position: 57756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:62302:1
position: 62302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57756-62302:1:exon

YJU2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: YJU2B
product: YJU2 splicing factor homolog B, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 60 samples with support for all annotated introns
transcript id: XM_041711796.1
SIO_010081: YJU2B
subclass of: SO_0000673
so part of: YJU2B
location: join(57756..57858,57986..58092,58366..58419,58876..58958,59046..59101,59450..59510,59588..59730,60171..60343,61297..61435,61515..62302)
location: region:57756-62302:1
so has part: feature:57756-57858:1:exon
so has part: feature:57986-58092:1:exon
so has part: feature:58366-58419:1:exon
so has part: feature:58876-58958:1:exon
so has part: feature:59046-59101:1:exon
so has part: feature:59450-59510:1:exon
so has part: feature:59588-59730:1:exon
so has part: feature:60171-60343:1:exon
so has part: feature:61297-61435:1:exon
so has part: feature:61515-62302:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:57756-57858:1:exon

position:57858:1
position: 57858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:57986-58092:1:exon

position:57986:1
position: 57986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:58092:1
position: 58092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:58366-58419:1:exon

position:58366:1
position: 58366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:58419:1
position: 58419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:58876-58958:1:exon

position:58876:1
position: 58876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:58958:1
position: 58958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:59046-59101:1:exon

position:59046:1
position: 59046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:59101:1
position: 59101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:59450-59510:1:exon

position:59450:1
position: 59450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:59510:1
position: 59510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:59588-59730:1:exon

position:59588:1
position: 59588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:59730:1
position: 59730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:60171-60343:1:exon

position:60171:1
position: 60171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:60343:1
position: 60343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:61297-61435:1:exon

position:61297:1
position: 61297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:61435:1
position: 61435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:61515-62302:1:exon

position:61515:1
position: 61515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

YJU2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: YJU2B
product: YJU2 splicing factor homolog B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_041711797.1
SIO_010081: YJU2B
subclass of: SO_0000673
so part of: YJU2B
location: join(57766..57858,57955..58092,58366..58419,58876..58958,59046..59101,59450..59510,59588..59730,60171..60343,61297..61435,61515..62302)
location: region:57766-62302:1
so has part: feature:57766-57858:1:exon
so has part: feature:57955-58092:1:exon
so has part: feature:58366-58419:1:exon
so has part: feature:58876-58958:1:exon
so has part: feature:59046-59101:1:exon
so has part: feature:59450-59510:1:exon
so has part: feature:59588-59730:1:exon
so has part: feature:60171-60343:1:exon
so has part: feature:61297-61435:1:exon
so has part: feature:61515-62302:1:exon

position:57766:1
position: 57766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57766-57858:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:57955-58092:1:exon

position:57955:1
position: 57955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:58366-58419:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:58876-58958:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:59046-59101:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:59450-59510:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:59588-59730:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:60171-60343:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:61297-61435:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:61515-62302:1:exon

YJU2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: YJU2B
product: YJU2 splicing factor homolog B, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 64 samples with support for all annotated introns
transcript id: XM_041711798.1
SIO_010081: YJU2B
subclass of: SO_0000673
so part of: YJU2B
location: join(57768..57858,57991..58092,58366..58419,58876..58958,59046..59101,59450..59510,59588..59730,60171..60343,61297..61435,61515..62302)
location: region:57768-62302:1
so has part: feature:57768-57858:1:exon
so has part: feature:57991-58092:1:exon
so has part: feature:58366-58419:1:exon
so has part: feature:58876-58958:1:exon
so has part: feature:59046-59101:1:exon
so has part: feature:59450-59510:1:exon
so has part: feature:59588-59730:1:exon
so has part: feature:60171-60343:1:exon
so has part: feature:61297-61435:1:exon
so has part: feature:61515-62302:1:exon

position:57768:1
position: 57768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57768-57858:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:57991-58092:1:exon

position:57991:1
position: 57991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:58366-58419:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:58876-58958:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:59046-59101:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:59450-59510:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:59588-59730:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:60171-60343:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:61297-61435:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:61515-62302:1:exon

YJU2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: YJU2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 130
translation: MGERKGTNKYYPPDFDPAKHGSLNKYHHSHPLRERARKLSQGILVIRFEMPFNIWCDGCQNHIGMGVRYNAEKKKVGSYYTTPVYRFRMKCHLCVNYIELQTDPGNCDYVIVSGARRKEERWEPEDSGQVLPTTPEQRERLAVDAMFRLEHGVSDRGVLERAAPTLARLQQAQDAWKDDFGLNSRLRRRFREEKKTLKEEEEEAAALQAKAGLSIPLLREEEEDRRLAALLTLRAPDSYEEKQRLKRSEISQRSWFGPRTAGGALQKLGLGSPRPPRAPLGPPPTPAGLGIVRRKAAEEGAQLVPRETPESGAEPPGAAPQDQPAAAPQSEGAPRDTPGAAALRDTPGAAHRDPPGTIPRDPPGAAHRDPPGAAPRDPPGTAAWDPPGAAPQAGGAPRDTPGAAARDPPGAAPRDPPGAAPRDPPGAAPRDTPGAAAPAPSLVADYSDSGSESP
SIO_010081: YJU2B
subclass of: SO_0000673
so part of: YJU2B
location: join(58090..58092,58366..58419,58876..58958,59046..59101,59450..59510,59588..59730,60171..60343,61297..61435,61515..62167)
location: region:58090-62167:1
so has part: feature:58090-58092:1:exon
so has part: feature:58366-58419:1:exon
so has part: feature:58876-58958:1:exon
so has part: feature:59046-59101:1:exon
so has part: feature:59450-59510:1:exon
so has part: feature:59588-59730:1:exon
so has part: feature:60171-60343:1:exon
so has part: feature:61297-61435:1:exon
so has part: feature:61515-62167:1:exon

XP_041567730.1
type: Protein
SIO_000068: ncbiprotein

position:58090:1
position: 58090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:62167:1
position: 62167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58090-58092:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:58366-58419:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:58876-58958:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:59046-59101:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:59450-59510:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:59588-59730:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:60171-60343:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:61297-61435:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:61515-62167:1:exon

YJU2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: YJU2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 130
translation: MGERKGTNKYYPPDFDPAKHGSLNKYHHSHPLRERARKLSQGILVIRFEMPFNIWCDGCQNHIGMGVRYNAEKKKVGSYYTTPVYRFRMKCHLCVNYIELQTDPGNCDYVIVSGARRKEERWEPEDSGQVLPTTPEQRERLAVDAMFRLEHGVSDRGVLERAAPTLARLQQAQDAWKDDFGLNSRLRRRFREEKKTLKEEEEEAAALQAKAGLSIPLLREEEEDRRLAALLTLRAPDSYEEKQRLKRSEISQRSWFGPRTAGGALQKLGLGSPRPPRAPLGPPPTPAGLGIVRRKAAEEGAQLVPRETPESGAEPPGAAPQDQPAAAPQSEGAPRDTPGAAALRDTPGAAHRDPPGTIPRDPPGAAHRDPPGAAPRDPPGTAAWDPPGAAPQAGGAPRDTPGAAARDPPGAAPRDPPGAAPRDPPGAAPRDTPGAAAPAPSLVADYSDSGSESP
SIO_010081: YJU2B
subclass of: SO_0000673
so part of: YJU2B
location: join(58090..58092,58366..58419,58876..58958,59046..59101,59450..59510,59588..59730,60171..60343,61297..61435,61515..62167)
location: region:58090-62167:1
so has part: feature:58090-58092:1:exon
so has part: feature:58366-58419:1:exon
so has part: feature:58876-58958:1:exon
so has part: feature:59046-59101:1:exon
so has part: feature:59450-59510:1:exon
so has part: feature:59588-59730:1:exon
so has part: feature:60171-60343:1:exon
so has part: feature:61297-61435:1:exon
so has part: feature:61515-62167:1:exon

XP_041567731.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:58090-58092:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:58366-58419:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:58876-58958:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:59046-59101:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:59450-59510:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:59588-59730:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:60171-60343:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:61297-61435:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:61515-62167:1:exon

YJU2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: YJU2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 130
translation: MGERKGTNKYYPPDFDPAKHGSLNKYHHSHPLRERARKLSQGILVIRFEMPFNIWCDGCQNHIGMGVRYNAEKKKVGSYYTTPVYRFRMKCHLCVNYIELQTDPGNCDYVIVSGARRKEERWEPEDSGQVLPTTPEQRERLAVDAMFRLEHGVSDRGVLERAAPTLARLQQAQDAWKDDFGLNSRLRRRFREEKKTLKEEEEEAAALQAKAGLSIPLLREEEEDRRLAALLTLRAPDSYEEKQRLKRSEISQRSWFGPRTAGGALQKLGLGSPRPPRAPLGPPPTPAGLGIVRRKAAEEGAQLVPRETPESGAEPPGAAPQDQPAAAPQSEGAPRDTPGAAALRDTPGAAHRDPPGTIPRDPPGAAHRDPPGAAPRDPPGTAAWDPPGAAPQAGGAPRDTPGAAARDPPGAAPRDPPGAAPRDPPGAAPRDTPGAAAPAPSLVADYSDSGSESP
SIO_010081: YJU2B
subclass of: SO_0000673
so part of: YJU2B
location: join(58090..58092,58366..58419,58876..58958,59046..59101,59450..59510,59588..59730,60171..60343,61297..61435,61515..62167)
location: region:58090-62167:1
so has part: feature:58090-58092:1:exon
so has part: feature:58366-58419:1:exon
so has part: feature:58876-58958:1:exon
so has part: feature:59046-59101:1:exon
so has part: feature:59450-59510:1:exon
so has part: feature:59588-59730:1:exon
so has part: feature:60171-60343:1:exon
so has part: feature:61297-61435:1:exon
so has part: feature:61515-62167:1:exon

XP_041567732.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:58090-58092:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:58366-58419:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:58876-58958:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:59046-59101:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:59450-59510:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:59588-59730:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:60171-60343:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:61297-61435:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:61515-62167:1:exon

MRI1
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: MRI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 62413..66213
location: region:62413-66213:1
so has part: feature:62413-66213:1:exon
subclass of: SO_0000010

121468331
type: Gene
SIO_000068: ncbigene

position:62413:1
position: 62413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:66213:1
position: 66213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62413-66213:1:exon

MRI1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: MRI1
product: methylthioribose-1-phosphate isomerase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 73 samples with support for all annotated introns
transcript id: XM_041711800.1
SIO_010081: MRI1
subclass of: SO_0000673
so part of: MRI1
location: join(62413..62592,63052..63293,63822..63994,64308..64484,64588..64812,64916..65127,65972..66027,66107..66213)
location: region:62413-66213:1
so has part: feature:62413-62592:1:exon
so has part: feature:63052-63293:1:exon
so has part: feature:63822-63994:1:exon
so has part: feature:64308-64484:1:exon
so has part: feature:64588-64812:1:exon
so has part: feature:64916-65127:1:exon
so has part: feature:65972-66027:1:exon
so has part: feature:66107-66213:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:62413-62592:1:exon

position:62592:1
position: 62592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:63052-63293:1:exon

position:63052:1
position: 63052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:63293:1
position: 63293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:63822-63994:1:exon

position:63822:1
position: 63822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:63994:1
position: 63994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:64308-64484:1:exon

position:64308:1
position: 64308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:64484:1
position: 64484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:64588-64812:1:exon

position:64588:1
position: 64588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:64812:1
position: 64812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:64916-65127:1:exon

position:64916:1
position: 64916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:65127:1
position: 65127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:65972-66027:1:exon

position:65972:1
position: 65972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:66027:1
position: 66027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:66107-66213:1:exon

position:66107:1
position: 66107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MRI1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: MRI1
product: methylthioribose-1-phosphate isomerase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 87 samples with support for all annotated introns
transcript id: XM_041711799.1
SIO_010081: MRI1
subclass of: SO_0000673
so part of: MRI1
location: join(62414..62592,63052..63293,63822..63994,64308..64484,64588..64812,64916..65059,65972..66027,66107..66213)
location: region:62414-66213:1
so has part: feature:62414-62592:1:exon
so has part: feature:63052-63293:1:exon
so has part: feature:63822-63994:1:exon
so has part: feature:64308-64484:1:exon
so has part: feature:64588-64812:1:exon
so has part: feature:64916-65059:1:exon
so has part: feature:65972-66027:1:exon
so has part: feature:66107-66213:1:exon

position:62414:1
position: 62414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62414-62592:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:63052-63293:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:63822-63994:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:64308-64484:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:64588-64812:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:64916-65059:1:exon

position:65059:1
position: 65059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:65972-66027:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:66107-66213:1:exon

MRI1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: MRI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: methylthioribose-1-phosphate isomerase
translation: MALESLRYRRGSLEVLNQRLLPGQLRYERVGGVQRAWAAIRDMEVRGAPAIALLGCLSLAVELAGGAGPQEDLGALEEFVGQKLGFLLSARPTAANLGREAERLRGWVRRRAETPGVTPQELRESIIEYIEGLLEKDRRDNRSIGAHGADAILGGLPGGGPVTLLTHCNTGTLATAGYGTALGVVRALHERGALSRVLCTETRPYNQGSRLSALELRHDGVPVTLIADSAAAAAMRLHGVHAVVVGADRVAANGDVANKIGTFQLAVAARHLRIPFYVAAPSSTCDPSLASGDLIPIEERPGTELTQLGGVLLAEPGVDVWNPAFDVTPHELITGGIITERGLFAASDVCGQLAERGER
SIO_010081: MRI1
subclass of: SO_0000673
so part of: MRI1
location: join(62461..62592,63052..63293,63822..63994,64308..64484,64588..64812,64916..65046)
location: region:62461-65046:1
so has part: feature:62461-62592:1:exon
so has part: feature:63052-63293:1:exon
so has part: feature:63822-63994:1:exon
so has part: feature:64308-64484:1:exon
so has part: feature:64588-64812:1:exon
so has part: feature:64916-65046:1:exon

XP_041567733.1
type: Protein
SIO_000068: ncbiprotein

position:62461:1
position: 62461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:65046:1
position: 65046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62461-62592:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:63052-63293:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:63822-63994:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:64308-64484:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:64588-64812:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:64916-65046:1:exon

MRI1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: MRI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: methylthioribose-1-phosphate isomerase
translation: MALESLRYRRGSLEVLNQRLLPGQLRYERVGGVQRAWAAIRDMEVRGAPAIALLGCLSLAVELAGGAGPQEDLGALEEFVGQKLGFLLSARPTAANLGREAERLRGWVRRRAETPGVTPQELRESIIEYIEGLLEKDRRDNRSIGAHGADAILGGLPGGGPVTLLTHCNTGTLATAGYGTALGVVRALHERGALSRVLCTETRPYNQGSRLSALELRHDGVPVTLIADSAAAAAMRLHGVHAVVVGADRVAANGDVANKIGTFQLAVAARHLRIPFYVAAPSSTCDPSLASGDLIPIEERPGTELTQLGGVLLAEPGVDVWNPAFDVTPHELITGGIITERGLFAASDVCGQLAERGER
SIO_010081: MRI1
subclass of: SO_0000673
so part of: MRI1
location: join(62461..62592,63052..63293,63822..63994,64308..64484,64588..64812,64916..65046)
location: region:62461-65046:1
so has part: feature:62461-62592:1:exon
so has part: feature:63052-63293:1:exon
so has part: feature:63822-63994:1:exon
so has part: feature:64308-64484:1:exon
so has part: feature:64588-64812:1:exon
so has part: feature:64916-65046:1:exon

XP_041567734.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:62461-62592:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:63052-63293:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:63822-63994:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:64308-64484:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:64588-64812:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:64916-65046:1:exon

C30H19orf53
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: C30H19orf53
note: HSPC023 protein-like; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: 65649..66332
location: region:65649-66332:1
so has part: feature:65649-66332:1:exon
subclass of: SO_0000010

100190628
type: Gene
SIO_000068: ncbigene

position:65649:1
position: 65649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:66332:1
position: 66332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65649-66332:1:exon

C30H19orf53
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: C30H19orf53
product: chromosome 30 C19orf53 homolog
inference: similar to RNA sequence, mRNA (same species):RefSeq:NM_001245586.2
exception: annotated by transcript or proteomic data
note: The RefSeq transcript has 1 substitution compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001245586.2
SIO_010081: C30H19orf53
subclass of: SO_0000673
so part of: C30H19orf53
location: join(65649..65770,65972..66027,66107..66332)
location: region:65649-66332:1
so has part: feature:65649-65770:1:exon
so has part: feature:65972-66027:1:exon
so has part: feature:66107-66332:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:65649-65770:1:exon

position:65770:1
position: 65770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:65972-66027:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:66107-66332:1:exon

C30H19orf53
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: C30H19orf53
note: leydig cell tumor 10 kDa protein homolog; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: putative HSPC023 protein
translation: MAQGRPKAAAKRPKAAKAAAAAARGARGPRKGGRSIAPKKLRVVQQQRLKKRLEVGIRLRIEREAVQRAQGALPKKLSLVRAPGPAKDGAKKGRG
SIO_010081: C30H19orf53
subclass of: SO_0000673
so part of: C30H19orf53
location: join(65674..65770,65972..66027,66107..66241)
location: region:65674-66241:1
so has part: feature:65674-65770:1:exon
so has part: feature:65972-66027:1:exon
so has part: feature:66107-66241:1:exon

NP_001232515.1
type: Protein
SIO_000068: ncbiprotein

position:65674:1
position: 65674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:66241:1
position: 66241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65674-65770:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:65972-66027:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:66107-66241:1:exon

NANOS3
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: NANOS3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 73977..78210
location: region:73977-78210:1
so has part: feature:73977-78210:1:exon
subclass of: SO_0000010

115491786
type: Gene
SIO_000068: ncbigene

position:73977:1
position: 73977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:78210:1
position: 78210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:73977-78210:1:exon

NANOS3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: NANOS3
product: nanos C2HC-type zinc finger 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_030260212.3
SIO_010081: NANOS3
subclass of: SO_0000673
so part of: NANOS3
location: join(73977..75522,75627..77144,77657..78210)
location: region:73977-78210:1
so has part: feature:73977-75522:1:exon
so has part: feature:75627-77144:1:exon
so has part: feature:77657-78210:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:73977-75522:1:exon

position:75522:1
position: 75522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:75627-77144:1:exon

position:75627:1
position: 75627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:77144:1
position: 77144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:77657-78210:1:exon

position:77657:1
position: 77657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NANOS3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: NANOS3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nanos homolog 3
translation: MEATGQFDMWRDYLGLAALVAVRLHDPAGRGDSVVPLGAVSSCAGPAPAVGTAPHVGPAPCARPAPCAGPAPAVGPAPAVGPGPHVGPAPCAGPAPAVGPAPAVGPAPAVGPGPHVGPAPCAGPAPAVGPAPAVGPSPAVGPAPAVGPSPAVGPAPAVGPSPAVGSAPAVGPAPAVGPAPAVGPAPAVGPAPAVGPAPAVGPSPAVGPAPAVGPSPAVGPAPRTNPAPRTGPAARPKPALCSFCQHNGEAPGVYQSHSLRDARGRLQCPVLRSYVCPQCGATQDQAHTRRFCPRTRRGYVSVYSHPLPAGRRQRNGRM
SIO_010081: NANOS3
subclass of: SO_0000673
so part of: NANOS3
location: 76152..77108
location: region:76152-77108:1
so has part: feature:76152-77108:1:exon

XP_030116072.3
type: Protein
SIO_000068: ncbiprotein

position:76152:1
position: 76152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:77108:1
position: 77108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:76152-77108:1:exon

BRME1
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: BRME1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(78151..81449)
location: region:78151-81449:-1
so has part: feature:78151-81449:-1:exon
subclass of: SO_0000010

115491741
type: Gene
SIO_000068: ncbigene

position:78151:-1
position: 78151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:81449:-1
position: 81449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78151-81449:-1:exon

BRME1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: BRME1
product: break repair meiotic recombinase recruitment factor 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030260108.3
SIO_010081: BRME1
subclass of: SO_0000673
so part of: BRME1
location: complement(join(78151..78326,78402..78473,78572..78630,78794..80337,80444..80481,81183..81449))
location: region:78151-81449:-1
so has part: feature:81183-81449:-1:exon
so has part: feature:80444-80481:-1:exon
so has part: feature:78794-80337:-1:exon
so has part: feature:78572-78630:-1:exon
so has part: feature:78402-78473:-1:exon
so has part: feature:78151-78326:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:81183-81449:-1:exon

position:81183:-1
position: 81183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:80444-80481:-1:exon

position:80444:-1
position: 80444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:80481:-1
position: 80481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:78794-80337:-1:exon

position:78794:-1
position: 78794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:80337:-1
position: 80337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:78572-78630:-1:exon

position:78572:-1
position: 78572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:78630:-1
position: 78630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:78402-78473:-1:exon

position:78402:-1
position: 78402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:78473:-1
position: 78473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:78151-78326:-1:exon

position:78326:-1
position: 78326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

BRME1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: BRME1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: break repair meiotic recombinase recruitment factor 1
translation: MGKRRSRPLPGDRKFHTPKPKRILQEAPGDPAGMEPELPAEGKTPQIGGFNVIFQEGRGEEIGGGRAPKWGISGGVEENHLEVPQLGILEVDGIGEDQLESPKPGILDGAGENCRESPKPAILEVDAAGEEQLESLKVGILDRTGKEKLESPKPGMLEVDGAGEEQLESPKPGILDGAGETCRESPKPAVLEVDGAGEEPPESVKCVILDGMGQNHLESSQQGILEGGGAGKEKLESPKPGMLEVDGAGEEQLESLEVGILDGMGEEQLESPKPGIPEVDGAAEEQLESLEVRILDGMGEEQLESPKPEIPDGAGEGQLESLEVGILDGTGEKQLESPKPGIPEADGAAEEQLKSPKSGIPEMDGAGEEQLESLEVGILDGMGEEQLESPKPGIPEADGAAEEHPEPNCEIPRLGVLDGMGEKEREPAAGGDSGVPKERSEVTDTAGERPEGALEEGSGAGIALGMDSGAPDGPRGPQSGAGDAESRSSQSGNSGMFTPGSGPAGTSSEPQEQQEGTSPELPAEKPRDTTGRIHTGSTGSSPWESAKAAEPADASDVVRGLIRELSDLNRLAMGARRGLELLRRPKPRRGRRAAPSGSRWKEG
SIO_010081: BRME1
subclass of: SO_0000673
so part of: BRME1
location: complement(join(78221..78326,78402..78473,78572..78630,78794..80337,80444..80474))
location: region:78221-80474:-1
so has part: feature:80444-80474:-1:exon
so has part: feature:78794-80337:-1:exon
so has part: feature:78572-78630:-1:exon
so has part: feature:78402-78473:-1:exon
so has part: feature:78221-78326:-1:exon

XP_030115968.3
type: Protein
SIO_000068: ncbiprotein

position:78221:-1
position: 78221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:80474:-1
position: 80474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:80444-80474:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:78794-80337:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:78572-78630:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:78402-78473:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:78221-78326:-1:exon

CC2D1A
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: CC2D1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 81291..90290
location: region:81291-90290:1
so has part: feature:81291-90290:1:exon
subclass of: SO_0000010

115491707
type: Gene
SIO_000068: ncbigene

position:81291:1
position: 81291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:90290:1
position: 90290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81291-90290:1:exon

CC2D1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: CC2D1A
product: coiled-coil and C2 domain containing 1A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_041711802.1
SIO_010081: CC2D1A
subclass of: SO_0000673
so part of: CC2D1A
location: join(81291..81347,81866..81939,82094..82226,82336..82448,82563..82625,82913..83059,83569..83868,83947..84001,84097..84216,84293..84423,84810..84882,84970..85272,85368..85540,85619..85741,86003..86061,86152..86268,86625..86698,86793..86851,87039..87090,87172..87271,87767..87857,88180..88314,88707..88756,88907..88970,89054..89180,89269..89345,89671..89718,89802..90290)
location: region:81291-90290:1
so has part: feature:81291-81347:1:exon
so has part: feature:81866-81939:1:exon
so has part: feature:82094-82226:1:exon
so has part: feature:82336-82448:1:exon
so has part: feature:82563-82625:1:exon
so has part: feature:82913-83059:1:exon
so has part: feature:83569-83868:1:exon
so has part: feature:83947-84001:1:exon
so has part: feature:84097-84216:1:exon
so has part: feature:84293-84423:1:exon
so has part: feature:84810-84882:1:exon
so has part: feature:84970-85272:1:exon
so has part: feature:85368-85540:1:exon
so has part: feature:85619-85741:1:exon
so has part: feature:86003-86061:1:exon
so has part: feature:86152-86268:1:exon
so has part: feature:86625-86698:1:exon
so has part: feature:86793-86851:1:exon
so has part: feature:87039-87090:1:exon
so has part: feature:87172-87271:1:exon
so has part: feature:87767-87857:1:exon
so has part: feature:88180-88314:1:exon
so has part: feature:88707-88756:1:exon
so has part: feature:88907-88970:1:exon
so has part: feature:89054-89180:1:exon
so has part: feature:89269-89345:1:exon
so has part: feature:89671-89718:1:exon
so has part: feature:89802-90290:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:81291-81347:1:exon

position:81347:1
position: 81347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:81866-81939:1:exon

position:81866:1
position: 81866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:81939:1
position: 81939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:82094-82226:1:exon

position:82094:1
position: 82094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:82226:1
position: 82226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:82336-82448:1:exon

position:82336:1
position: 82336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:82448:1
position: 82448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:82563-82625:1:exon

position:82563:1
position: 82563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:82625:1
position: 82625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:82913-83059:1:exon

position:82913:1
position: 82913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:83059:1
position: 83059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:83569-83868:1:exon

position:83569:1
position: 83569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:83868:1
position: 83868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:83947-84001:1:exon

position:83947:1
position: 83947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:84001:1
position: 84001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:84097-84216:1:exon

position:84097:1
position: 84097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:84216:1
position: 84216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:84293-84423:1:exon

position:84293:1
position: 84293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:84423:1
position: 84423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:84810-84882:1:exon

position:84810:1
position: 84810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:84882:1
position: 84882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:84970-85272:1:exon

position:84970:1
position: 84970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:85272:1
position: 85272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:85368-85540:1:exon

position:85368:1
position: 85368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:85540:1
position: 85540
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 14
SIO_000628: feature:85619-85741:1:exon

position:85619:1
position: 85619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:85741:1
position: 85741
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 15
SIO_000628: feature:86003-86061:1:exon

position:86003:1
position: 86003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:86061:1
position: 86061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:86152-86268:1:exon

position:86152:1
position: 86152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:86268:1
position: 86268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:86625-86698:1:exon

position:86625:1
position: 86625
reference: sequence
type: ForwardStrandPosition
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position:86698:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 18
SIO_000628: feature:86793-86851:1:exon

position:86793:1
position: 86793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:86851:1
position: 86851
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 19
SIO_000628: feature:87039-87090:1:exon

position:87039:1
position: 87039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:87090:1
position: 87090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:87172-87271:1:exon

position:87172:1
position: 87172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:87271:1
position: 87271
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 21
SIO_000628: feature:87767-87857:1:exon

position:87767:1
position: 87767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:87857:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 22
SIO_000628: feature:88180-88314:1:exon

position:88180:1
position: 88180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:88314:1
position: 88314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:88707-88756:1:exon

position:88707:1
position: 88707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:88756:1
position: 88756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:88907-88970:1:exon

position:88907:1
position: 88907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:88970:1
position: 88970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:89054-89180:1:exon

position:89054:1
position: 89054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:89180:1
position: 89180
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 26
SIO_000628: feature:89269-89345:1:exon

position:89269:1
position: 89269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:89345:1
position: 89345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:89671-89718:1:exon

position:89671:1
position: 89671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:89718:1
position: 89718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:89802-90290:1:exon

position:89802:1
position: 89802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CC2D1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: CC2D1A
product: coiled-coil and C2 domain containing 1A, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_030259996.3
SIO_010081: CC2D1A
subclass of: SO_0000673
so part of: CC2D1A
location: join(81291..81347,81866..81939,82094..82226,82336..82448,82563..82625,82913..83059,83569..83868,83947..84001,84097..84216,84293..84423,84810..84882,84970..85103,85191..85272,85368..85540,85619..85741,86003..86061,86152..86268,86625..86698,86793..86851,87039..87090,87172..87271,87767..87857,88180..88314,88707..88756,88907..88970,89054..89180,89269..89345,89671..89718,89802..90290)
location: region:81291-90290:1
so has part: feature:81291-81347:1:exon
so has part: feature:81866-81939:1:exon
so has part: feature:82094-82226:1:exon
so has part: feature:82336-82448:1:exon
so has part: feature:82563-82625:1:exon
so has part: feature:82913-83059:1:exon
so has part: feature:83569-83868:1:exon
so has part: feature:83947-84001:1:exon
so has part: feature:84097-84216:1:exon
so has part: feature:84293-84423:1:exon
so has part: feature:84810-84882:1:exon
so has part: feature:84970-85103:1:exon
so has part: feature:85191-85272:1:exon
so has part: feature:85368-85540:1:exon
so has part: feature:85619-85741:1:exon
so has part: feature:86003-86061:1:exon
so has part: feature:86152-86268:1:exon
so has part: feature:86625-86698:1:exon
so has part: feature:86793-86851:1:exon
so has part: feature:87039-87090:1:exon
so has part: feature:87172-87271:1:exon
so has part: feature:87767-87857:1:exon
so has part: feature:88180-88314:1:exon
so has part: feature:88707-88756:1:exon
so has part: feature:88907-88970:1:exon
so has part: feature:89054-89180:1:exon
so has part: feature:89269-89345:1:exon
so has part: feature:89671-89718:1:exon
so has part: feature:89802-90290:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:81291-81347:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:81866-81939:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:82094-82226:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:82336-82448:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:82563-82625:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:82913-83059:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:83569-83868:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:83947-84001:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:84097-84216:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:84293-84423:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:84810-84882:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:84970-85103:1:exon

position:85103:1
position: 85103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:85191-85272:1:exon

position:85191:1
position: 85191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:85368-85540:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:85619-85741:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:86003-86061:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:86152-86268:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:86625-86698:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:86793-86851:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:87039-87090:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:87172-87271:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:87767-87857:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:88180-88314:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:88707-88756:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:88907-88970:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:89054-89180:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:89269-89345:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:89671-89718:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:89802-90290:1:exon

CC2D1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: CC2D1A
product: coiled-coil and C2 domain containing 1A, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_041711804.1
SIO_010081: CC2D1A
subclass of: SO_0000673
so part of: CC2D1A
location: join(81291..81347,81866..81939,82094..82226,82336..82448,82563..82625,82913..83059,83569..83868,83947..84001,84097..84120,84166..84216,84293..84423,84810..84882,84970..85272,85368..85540,85619..85741,86003..86061,86152..86268,86625..86698,86793..86851,87039..87090,87172..87271,87767..87857,88180..88314,88707..88756,88907..88970,89054..89180,89269..89345,89671..89718,89802..90290)
location: region:81291-90290:1
so has part: feature:81291-81347:1:exon
so has part: feature:81866-81939:1:exon
so has part: feature:82094-82226:1:exon
so has part: feature:82336-82448:1:exon
so has part: feature:82563-82625:1:exon
so has part: feature:82913-83059:1:exon
so has part: feature:83569-83868:1:exon
so has part: feature:83947-84001:1:exon
so has part: feature:84097-84120:1:exon
so has part: feature:84166-84216:1:exon
so has part: feature:84293-84423:1:exon
so has part: feature:84810-84882:1:exon
so has part: feature:84970-85272:1:exon
so has part: feature:85368-85540:1:exon
so has part: feature:85619-85741:1:exon
so has part: feature:86003-86061:1:exon
so has part: feature:86152-86268:1:exon
so has part: feature:86625-86698:1:exon
so has part: feature:86793-86851:1:exon
so has part: feature:87039-87090:1:exon
so has part: feature:87172-87271:1:exon
so has part: feature:87767-87857:1:exon
so has part: feature:88180-88314:1:exon
so has part: feature:88707-88756:1:exon
so has part: feature:88907-88970:1:exon
so has part: feature:89054-89180:1:exon
so has part: feature:89269-89345:1:exon
so has part: feature:89671-89718:1:exon
so has part: feature:89802-90290:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:81291-81347:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:81866-81939:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:82094-82226:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:82336-82448:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:82563-82625:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:82913-83059:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:83569-83868:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:83947-84001:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:84097-84120:1:exon

position:84120:1
position: 84120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:84166-84216:1:exon

position:84166:1
position: 84166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:84293-84423:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:84810-84882:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:84970-85272:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:85368-85540:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:85619-85741:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:86003-86061:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:86152-86268:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:86625-86698:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:86793-86851:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:87039-87090:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:87172-87271:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:87767-87857:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:88180-88314:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:88707-88756:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:88907-88970:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:89054-89180:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:89269-89345:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:89671-89718:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:89802-90290:1:exon

CC2D1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: CC2D1A
product: coiled-coil and C2 domain containing 1A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_041711803.1
SIO_010081: CC2D1A
subclass of: SO_0000673
so part of: CC2D1A
location: join(81367..81431,81866..81939,82094..82226,82336..82448,82563..82625,82913..83059,83569..83868,83947..84001,84097..84216,84293..84423,84810..84882,84970..85272,85368..85540,85619..85741,86003..86061,86152..86268,86625..86698,86793..86851,87039..87090,87172..87271,87767..87857,88180..88314,88707..88756,88907..88970,89054..89180,89269..89345,89671..89718,89802..90290)
location: region:81367-90290:1
so has part: feature:81367-81431:1:exon
so has part: feature:81866-81939:1:exon
so has part: feature:82094-82226:1:exon
so has part: feature:82336-82448:1:exon
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so has part: feature:84810-84882:1:exon
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so has part: feature:85368-85540:1:exon
so has part: feature:85619-85741:1:exon
so has part: feature:86003-86061:1:exon
so has part: feature:86152-86268:1:exon
so has part: feature:86625-86698:1:exon
so has part: feature:86793-86851:1:exon
so has part: feature:87039-87090:1:exon
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so has part: feature:88907-88970:1:exon
so has part: feature:89054-89180:1:exon
so has part: feature:89269-89345:1:exon
so has part: feature:89671-89718:1:exon
so has part: feature:89802-90290:1:exon

position:81367:1
position: 81367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81367-81431:1:exon

position:81431:1
position: 81431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:81866-81939:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:82094-82226:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:82336-82448:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:82563-82625:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:82913-83059:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:83569-83868:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:83947-84001:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:84097-84216:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:84293-84423:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:84810-84882:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:84970-85272:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:85368-85540:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:85619-85741:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:86003-86061:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:86152-86268:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:86625-86698:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:86793-86851:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:87039-87090:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:87172-87271:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:87767-87857:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:88180-88314:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:88707-88756:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:88907-88970:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:89054-89180:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:89269-89345:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:89671-89718:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:89802-90290:1:exon

CC2D1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: CC2D1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil and C2 domain-containing protein 1A isoform X1
translation: MSRAGRVPGRGAAVARQMGLLPGPGAGGSPGDADGDAALEAELLLLLGGREAPERPQPPPRDLAAVEALAQLCLRDPPEEEEEEEEEGEEDLENEEELLAELQEVLEEGSESPADAETPQDPAPAAALLAELEERAQLYRAALGSSGNDNGNNNGSSGARLRRLQRGLKTLEQMLESVRSGKPIDQAEIPPPVALGKATGTPGAPPAVSPEPPVQPPAPAQPPPAPDPCPGPGSVPVLRLRLQELQKEALGAKRRGDNAMALEHFRAAKRLEAQLEALGQGRAPPAPDPQPEEPRDPPVRDPPARDQPARDPPARDPPARDPPATSPEPPRAPRDVREALEQRMERYRAAAGQAKDSGDARKARMHERIVKQYQAALRAHSAGKAVDLSELPVPPGFPPIQGTETPAEPSISGMLEAASRLAAPEQEEEEEEEEEKEDTKAGFWLGGVGRKSRGFAGGDIPSDSHPVLQAQPSAPPVPPPKQPARNSQAAPKPAGKAQQQLEFLELRRRQLAQAALRAKRRNDLEGAKLLLRRAKGVEGLLQAARGGLPVDIAQVPEVPLDGAEFELGPARGVPMTPEVAKTFLQLAAALRKQHQMCLTYSRQFAHLGNISETTRCEALAEECRRHMETLRREHGRGGPPPRPRYEQRTFSIIKTFPELSSSDLELGIERGIGLPVPPGVAPGDLDTFVRFEFPHPSVEEAQRDKTNVVKGTDCPEFRARFRLRLLRGHRGLRRLLSSRGIRLEVTQKGGLFRPERALGSVQLRLEGLEGSCELREQLELLDGRRRTGGRLEVWVRIREPLGPQRQLEPRSERWLVLEPAAEPTVAVPKPSAAAPKDGNNRALPTLPSLNLLLFDRERLERKMVPLGRAGRPVPPELRQQHQELQRRIQGLRARLQGGDPRFRTEYAEHLERHLRLYTEAARRLGTQGEREAAKEALYKRNLVESELRKLRG
SIO_010081: CC2D1A
subclass of: SO_0000673
so part of: CC2D1A
location: join(81889..81939,82094..82226,82336..82448,82563..82625,82913..83059,83569..83868,83947..84001,84097..84216,84293..84423,84810..84882,84970..85272,85368..85540,85619..85741,86003..86061,86152..86268,86625..86698,86793..86851,87039..87090,87172..87271,87767..87857,88180..88314,88707..88756,88907..88970,89054..89180,89269..89345,89671..89718,89802..89822)
location: region:81889-89822:1
so has part: feature:81889-81939:1:exon
so has part: feature:82094-82226:1:exon
so has part: feature:82336-82448:1:exon
so has part: feature:82563-82625:1:exon
so has part: feature:82913-83059:1:exon
so has part: feature:83569-83868:1:exon
so has part: feature:83947-84001:1:exon
so has part: feature:84097-84216:1:exon
so has part: feature:84293-84423:1:exon
so has part: feature:84810-84882:1:exon
so has part: feature:84970-85272:1:exon
so has part: feature:85368-85540:1:exon
so has part: feature:85619-85741:1:exon
so has part: feature:86003-86061:1:exon
so has part: feature:86152-86268:1:exon
so has part: feature:86625-86698:1:exon
so has part: feature:86793-86851:1:exon
so has part: feature:87039-87090:1:exon
so has part: feature:87172-87271:1:exon
so has part: feature:87767-87857:1:exon
so has part: feature:88180-88314:1:exon
so has part: feature:88707-88756:1:exon
so has part: feature:88907-88970:1:exon
so has part: feature:89054-89180:1:exon
so has part: feature:89269-89345:1:exon
so has part: feature:89671-89718:1:exon
so has part: feature:89802-89822:1:exon

XP_041567736.1
type: Protein
SIO_000068: ncbiprotein

position:81889:1
position: 81889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:89822:1
position: 89822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81889-81939:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:82094-82226:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:82336-82448:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:82563-82625:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:82913-83059:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:83569-83868:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:83947-84001:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:84097-84216:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:84293-84423:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:84810-84882:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:84970-85272:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:85368-85540:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:85619-85741:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:86003-86061:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:86152-86268:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:86625-86698:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:86793-86851:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:87039-87090:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:87172-87271:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:87767-87857:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:88180-88314:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:88707-88756:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:88907-88970:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:89054-89180:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:89269-89345:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:89671-89718:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:89802-89822:1:exon

CC2D1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: CC2D1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil and C2 domain-containing protein 1A isoform X1
translation: MSRAGRVPGRGAAVARQMGLLPGPGAGGSPGDADGDAALEAELLLLLGGREAPERPQPPPRDLAAVEALAQLCLRDPPEEEEEEEEEGEEDLENEEELLAELQEVLEEGSESPADAETPQDPAPAAALLAELEERAQLYRAALGSSGNDNGNNNGSSGARLRRLQRGLKTLEQMLESVRSGKPIDQAEIPPPVALGKATGTPGAPPAVSPEPPVQPPAPAQPPPAPDPCPGPGSVPVLRLRLQELQKEALGAKRRGDNAMALEHFRAAKRLEAQLEALGQGRAPPAPDPQPEEPRDPPVRDPPARDQPARDPPARDPPARDPPATSPEPPRAPRDVREALEQRMERYRAAAGQAKDSGDARKARMHERIVKQYQAALRAHSAGKAVDLSELPVPPGFPPIQGTETPAEPSISGMLEAASRLAAPEQEEEEEEEEEKEDTKAGFWLGGVGRKSRGFAGGDIPSDSHPVLQAQPSAPPVPPPKQPARNSQAAPKPAGKAQQQLEFLELRRRQLAQAALRAKRRNDLEGAKLLLRRAKGVEGLLQAARGGLPVDIAQVPEVPLDGAEFELGPARGVPMTPEVAKTFLQLAAALRKQHQMCLTYSRQFAHLGNISETTRCEALAEECRRHMETLRREHGRGGPPPRPRYEQRTFSIIKTFPELSSSDLELGIERGIGLPVPPGVAPGDLDTFVRFEFPHPSVEEAQRDKTNVVKGTDCPEFRARFRLRLLRGHRGLRRLLSSRGIRLEVTQKGGLFRPERALGSVQLRLEGLEGSCELREQLELLDGRRRTGGRLEVWVRIREPLGPQRQLEPRSERWLVLEPAAEPTVAVPKPSAAAPKDGNNRALPTLPSLNLLLFDRERLERKMVPLGRAGRPVPPELRQQHQELQRRIQGLRARLQGGDPRFRTEYAEHLERHLRLYTEAARRLGTQGEREAAKEALYKRNLVESELRKLRG
SIO_010081: CC2D1A
subclass of: SO_0000673
so part of: CC2D1A
location: join(81889..81939,82094..82226,82336..82448,82563..82625,82913..83059,83569..83868,83947..84001,84097..84216,84293..84423,84810..84882,84970..85272,85368..85540,85619..85741,86003..86061,86152..86268,86625..86698,86793..86851,87039..87090,87172..87271,87767..87857,88180..88314,88707..88756,88907..88970,89054..89180,89269..89345,89671..89718,89802..89822)
location: region:81889-89822:1
so has part: feature:81889-81939:1:exon
so has part: feature:82094-82226:1:exon
so has part: feature:82336-82448:1:exon
so has part: feature:82563-82625:1:exon
so has part: feature:82913-83059:1:exon
so has part: feature:83569-83868:1:exon
so has part: feature:83947-84001:1:exon
so has part: feature:84097-84216:1:exon
so has part: feature:84293-84423:1:exon
so has part: feature:84810-84882:1:exon
so has part: feature:84970-85272:1:exon
so has part: feature:85368-85540:1:exon
so has part: feature:85619-85741:1:exon
so has part: feature:86003-86061:1:exon
so has part: feature:86152-86268:1:exon
so has part: feature:86625-86698:1:exon
so has part: feature:86793-86851:1:exon
so has part: feature:87039-87090:1:exon
so has part: feature:87172-87271:1:exon
so has part: feature:87767-87857:1:exon
so has part: feature:88180-88314:1:exon
so has part: feature:88707-88756:1:exon
so has part: feature:88907-88970:1:exon
so has part: feature:89054-89180:1:exon
so has part: feature:89269-89345:1:exon
so has part: feature:89671-89718:1:exon
so has part: feature:89802-89822:1:exon

XP_041567737.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:81889-81939:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:82094-82226:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:82336-82448:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:82563-82625:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:82913-83059:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:83569-83868:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:83947-84001:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:84097-84216:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:84293-84423:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:84810-84882:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:84970-85272:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:85368-85540:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:85619-85741:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:86003-86061:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:86152-86268:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:86625-86698:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:86793-86851:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:87039-87090:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:87172-87271:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:87767-87857:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:88180-88314:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:88707-88756:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:88907-88970:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:89054-89180:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:89269-89345:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:89671-89718:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:89802-89822:1:exon

CC2D1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: CC2D1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil and C2 domain-containing protein 1A isoform X3
translation: MSRAGRVPGRGAAVARQMGLLPGPGAGGSPGDADGDAALEAELLLLLGGREAPERPQPPPRDLAAVEALAQLCLRDPPEEEEEEEEEGEEDLENEEELLAELQEVLEEGSESPADAETPQDPAPAAALLAELEERAQLYRAALGSSGNDNGNNNGSSGARLRRLQRGLKTLEQMLESVRSGKPIDQAEIPPPVALGKATGTPGAPPAVSPEPPVQPPAPAQPPPAPDPCPGPGSVPVLRLRLQELQKEALGAKRRGDNAMALEHFRAAKRLEAQLEALGQGRAPPAPDPQPEEPRDPPVRDPPARDQPARDPPARDPPARDPPATSPEPPRAPRDVREALEQRMERYRAAAGQAKDSGDARKARMHERIVKQYQAALRAHSAGKAVDLSELPVPPGFPPIQGTETPAEPSISGMLEAASRLAAPEQEEEEEEEEEKEDTKAQPSAPPVPPPKQPARNSQAAPKPAGKAQQQLEFLELRRRQLAQAALRAKRRNDLEGAKLLLRRAKGVEGLLQAARGGLPVDIAQVPEVPLDGAEFELGPARGVPMTPEVAKTFLQLAAALRKQHQMCLTYSRQFAHLGNISETTRCEALAEECRRHMETLRREHGRGGPPPRPRYEQRTFSIIKTFPELSSSDLELGIERGIGLPVPPGVAPGDLDTFVRFEFPHPSVEEAQRDKTNVVKGTDCPEFRARFRLRLLRGHRGLRRLLSSRGIRLEVTQKGGLFRPERALGSVQLRLEGLEGSCELREQLELLDGRRRTGGRLEVWVRIREPLGPQRQLEPRSERWLVLEPAAEPTVAVPKPSAAAPKDGNNRALPTLPSLNLLLFDRERLERKMVPLGRAGRPVPPELRQQHQELQRRIQGLRARLQGGDPRFRTEYAEHLERHLRLYTEAARRLGTQGEREAAKEALYKRNLVESELRKLRG
SIO_010081: CC2D1A
subclass of: SO_0000673
so part of: CC2D1A
location: join(81889..81939,82094..82226,82336..82448,82563..82625,82913..83059,83569..83868,83947..84001,84097..84216,84293..84423,84810..84882,84970..85103,85191..85272,85368..85540,85619..85741,86003..86061,86152..86268,86625..86698,86793..86851,87039..87090,87172..87271,87767..87857,88180..88314,88707..88756,88907..88970,89054..89180,89269..89345,89671..89718,89802..89822)
location: region:81889-89822:1
so has part: feature:81889-81939:1:exon
so has part: feature:82094-82226:1:exon
so has part: feature:82336-82448:1:exon
so has part: feature:82563-82625:1:exon
so has part: feature:82913-83059:1:exon
so has part: feature:83569-83868:1:exon
so has part: feature:83947-84001:1:exon
so has part: feature:84097-84216:1:exon
so has part: feature:84293-84423:1:exon
so has part: feature:84810-84882:1:exon
so has part: feature:84970-85103:1:exon
so has part: feature:85191-85272:1:exon
so has part: feature:85368-85540:1:exon
so has part: feature:85619-85741:1:exon
so has part: feature:86003-86061:1:exon
so has part: feature:86152-86268:1:exon
so has part: feature:86625-86698:1:exon
so has part: feature:86793-86851:1:exon
so has part: feature:87039-87090:1:exon
so has part: feature:87172-87271:1:exon
so has part: feature:87767-87857:1:exon
so has part: feature:88180-88314:1:exon
so has part: feature:88707-88756:1:exon
so has part: feature:88907-88970:1:exon
so has part: feature:89054-89180:1:exon
so has part: feature:89269-89345:1:exon
so has part: feature:89671-89718:1:exon
so has part: feature:89802-89822:1:exon

XP_030115856.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:81889-81939:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:82094-82226:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:82336-82448:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:82563-82625:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:82913-83059:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:83569-83868:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:83947-84001:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:84097-84216:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:84293-84423:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:84810-84882:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:84970-85103:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:85191-85272:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:85368-85540:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:85619-85741:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:86003-86061:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:86152-86268:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:86625-86698:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:86793-86851:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:87039-87090:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:87172-87271:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:87767-87857:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:88180-88314:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:88707-88756:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:88907-88970:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:89054-89180:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:89269-89345:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:89671-89718:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:89802-89822:1:exon

CC2D1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: CC2D1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil and C2 domain-containing protein 1A isoform X2
translation: MSRAGRVPGRGAAVARQMGLLPGPGAGGSPGDADGDAALEAELLLLLGGREAPERPQPPPRDLAAVEALAQLCLRDPPEEEEEEEEEGEEDLENEEELLAELQEVLEEGSESPADAETPQDPAPAAALLAELEERAQLYRAALGSSGNDNGNNNGSSGARLRRLQRGLKTLEQMLESVRSGKPIDQAEIPPPVALGKATGTPGAPPAVSPEPPVQPPAPAQPPPAPDPCPGPGSVPVLRLRLQELQKEALGAKRRGDNAMALEHFRAAKRLEAQLEALGQGRAPPAPDPQPEEPRDPPARDPPARDPPATSPEPPRAPRDVREALEQRMERYRAAAGQAKDSGDARKARMHERIVKQYQAALRAHSAGKAVDLSELPVPPGFPPIQGTETPAEPSISGMLEAASRLAAPEQEEEEEEEEEKEDTKAGFWLGGVGRKSRGFAGGDIPSDSHPVLQAQPSAPPVPPPKQPARNSQAAPKPAGKAQQQLEFLELRRRQLAQAALRAKRRNDLEGAKLLLRRAKGVEGLLQAARGGLPVDIAQVPEVPLDGAEFELGPARGVPMTPEVAKTFLQLAAALRKQHQMCLTYSRQFAHLGNISETTRCEALAEECRRHMETLRREHGRGGPPPRPRYEQRTFSIIKTFPELSSSDLELGIERGIGLPVPPGVAPGDLDTFVRFEFPHPSVEEAQRDKTNVVKGTDCPEFRARFRLRLLRGHRGLRRLLSSRGIRLEVTQKGGLFRPERALGSVQLRLEGLEGSCELREQLELLDGRRRTGGRLEVWVRIREPLGPQRQLEPRSERWLVLEPAAEPTVAVPKPSAAAPKDGNNRALPTLPSLNLLLFDRERLERKMVPLGRAGRPVPPELRQQHQELQRRIQGLRARLQGGDPRFRTEYAEHLERHLRLYTEAARRLGTQGEREAAKEALYKRNLVESELRKLRG
SIO_010081: CC2D1A
subclass of: SO_0000673
so part of: CC2D1A
location: join(81889..81939,82094..82226,82336..82448,82563..82625,82913..83059,83569..83868,83947..84001,84097..84120,84166..84216,84293..84423,84810..84882,84970..85272,85368..85540,85619..85741,86003..86061,86152..86268,86625..86698,86793..86851,87039..87090,87172..87271,87767..87857,88180..88314,88707..88756,88907..88970,89054..89180,89269..89345,89671..89718,89802..89822)
location: region:81889-89822:1
so has part: feature:81889-81939:1:exon
so has part: feature:82094-82226:1:exon
so has part: feature:82336-82448:1:exon
so has part: feature:82563-82625:1:exon
so has part: feature:82913-83059:1:exon
so has part: feature:83569-83868:1:exon
so has part: feature:83947-84001:1:exon
so has part: feature:84097-84120:1:exon
so has part: feature:84166-84216:1:exon
so has part: feature:84293-84423:1:exon
so has part: feature:84810-84882:1:exon
so has part: feature:84970-85272:1:exon
so has part: feature:85368-85540:1:exon
so has part: feature:85619-85741:1:exon
so has part: feature:86003-86061:1:exon
so has part: feature:86152-86268:1:exon
so has part: feature:86625-86698:1:exon
so has part: feature:86793-86851:1:exon
so has part: feature:87039-87090:1:exon
so has part: feature:87172-87271:1:exon
so has part: feature:87767-87857:1:exon
so has part: feature:88180-88314:1:exon
so has part: feature:88707-88756:1:exon
so has part: feature:88907-88970:1:exon
so has part: feature:89054-89180:1:exon
so has part: feature:89269-89345:1:exon
so has part: feature:89671-89718:1:exon
so has part: feature:89802-89822:1:exon

XP_041567738.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:81889-81939:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:82094-82226:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:82336-82448:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:82563-82625:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:82913-83059:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:83569-83868:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:83947-84001:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:84097-84120:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:84166-84216:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:84293-84423:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:84810-84882:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:84970-85272:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:85368-85540:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:85619-85741:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:86003-86061:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:86152-86268:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:86625-86698:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:86793-86851:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:87039-87090:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:87172-87271:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:87767-87857:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:88180-88314:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:88707-88756:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:88907-88970:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:89054-89180:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:89269-89345:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:89671-89718:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:89802-89822:1:exon

DCAF15
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: DCAF15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 90364..96818
location: region:90364-96818:1
so has part: feature:90364-96818:1:exon
subclass of: SO_0000010

115491849
type: Gene
SIO_000068: ncbigene

position:90364:1
position: 90364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:96818:1
position: 96818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90364-96818:1:exon

DCAF15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: DCAF15
product: DDB1 and CUL4 associated factor 15, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 73 samples with support for all annotated introns
transcript id: XM_032745597.2
SIO_010081: DCAF15
subclass of: SO_0000673
so part of: DCAF15
location: join(90364..90736,91110..91207,91709..91841,92060..92166,92260..92396,92929..93099,93549..93989,94097..94188,94279..94407,94801..94886,94954..95058,95663..95778,96236..96818)
location: region:90364-96818:1
so has part: feature:90364-90736:1:exon
so has part: feature:91110-91207:1:exon
so has part: feature:91709-91841:1:exon
so has part: feature:92060-92166:1:exon
so has part: feature:92260-92396:1:exon
so has part: feature:92929-93099:1:exon
so has part: feature:93549-93989:1:exon
so has part: feature:94097-94188:1:exon
so has part: feature:94279-94407:1:exon
so has part: feature:94801-94886:1:exon
so has part: feature:94954-95058:1:exon
so has part: feature:95663-95778:1:exon
so has part: feature:96236-96818:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:90364-90736:1:exon

position:90736:1
position: 90736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:91110-91207:1:exon

position:91110:1
position: 91110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:91207:1
position: 91207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:91709-91841:1:exon

position:91709:1
position: 91709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:91841:1
position: 91841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:92060-92166:1:exon

position:92060:1
position: 92060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:92166:1
position: 92166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:92260-92396:1:exon

position:92260:1
position: 92260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:92396:1
position: 92396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:92929-93099:1:exon

position:92929:1
position: 92929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:93099:1
position: 93099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:93549-93989:1:exon

position:93549:1
position: 93549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:93989:1
position: 93989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:94097-94188:1:exon

position:94097:1
position: 94097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:94188:1
position: 94188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:94279-94407:1:exon

position:94279:1
position: 94279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:94407:1
position: 94407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:94801-94886:1:exon

position:94801:1
position: 94801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:94886:1
position: 94886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:94954-95058:1:exon

position:94954:1
position: 94954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:95058:1
position: 95058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:95663-95778:1:exon

position:95663:1
position: 95663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:95778:1
position: 95778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:96236-96818:1:exon

position:96236:1
position: 96236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DCAF15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: DCAF15
product: DDB1 and CUL4 associated factor 15, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 63 samples with support for all annotated introns
transcript id: XM_032745598.2
SIO_010081: DCAF15
subclass of: SO_0000673
so part of: DCAF15
location: join(90364..90736,91110..91207,91709..91841,92060..92166,92260..92396,92929..93099,93549..93989,94097..94188,94279..94407,94801..94886,94954..95058,95669..95778,96236..96818)
location: region:90364-96818:1
so has part: feature:90364-90736:1:exon
so has part: feature:91110-91207:1:exon
so has part: feature:91709-91841:1:exon
so has part: feature:92060-92166:1:exon
so has part: feature:92260-92396:1:exon
so has part: feature:92929-93099:1:exon
so has part: feature:93549-93989:1:exon
so has part: feature:94097-94188:1:exon
so has part: feature:94279-94407:1:exon
so has part: feature:94801-94886:1:exon
so has part: feature:94954-95058:1:exon
so has part: feature:95669-95778:1:exon
so has part: feature:96236-96818:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:90364-90736:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:91110-91207:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:91709-91841:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:92060-92166:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:92260-92396:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:92929-93099:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:93549-93989:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:94097-94188:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:94279-94407:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:94801-94886:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:94954-95058:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:95669-95778:1:exon

position:95669:1
position: 95669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:96236-96818:1:exon

DCAF15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: DCAF15
product: DDB1 and CUL4 associated factor 15, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_032745599.2
SIO_010081: DCAF15
subclass of: SO_0000673
so part of: DCAF15
location: join(90364..90736,91110..91207,91709..91841,92060..92166,92260..92396,92929..93099,93549..93989,94097..94188,94279..94407,94801..94886,94954..95058,96236..96818)
location: region:90364-96818:1
so has part: feature:90364-90736:1:exon
so has part: feature:91110-91207:1:exon
so has part: feature:91709-91841:1:exon
so has part: feature:92060-92166:1:exon
so has part: feature:92260-92396:1:exon
so has part: feature:92929-93099:1:exon
so has part: feature:93549-93989:1:exon
so has part: feature:94097-94188:1:exon
so has part: feature:94279-94407:1:exon
so has part: feature:94801-94886:1:exon
so has part: feature:94954-95058:1:exon
so has part: feature:96236-96818:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:90364-90736:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:91110-91207:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:91709-91841:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:92060-92166:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:92260-92396:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:92929-93099:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:93549-93989:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:94097-94188:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:94279-94407:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:94801-94886:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:94954-95058:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:96236-96818:1:exon

DCAF15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: DCAF15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DDB1- and CUL4-associated factor 15 isoform X3
translation: MAPSSKAERGGPGGKRGTAGPAAAGTAPRGRREHLVRQLDRVRLSGQLSPRLFRKLPPRVCVALKSIVDVEFLWAGHIFLGFSKCGRYVLSYTSSSGDDFSFYLYHLYWWEFNVHSKLRLVRQVRLFQGEEIYSDLYLTVCEWPGDSDMVIVFGFNTRSAPGLQVSAMLMSDENHRDIYVSAVAVPPTRHCPACRRGAETPGEAPRACLRHGFLLHTKFQVVYPFPTFQPAFQLRKDHVVLLNTSFSLVACAIAVHPAGDSSPQQILYRRRNLLGPGRRGENAPPEPPEQLEGSGGAPPAAQPPPGPPQPPELPPGPPSLAVAKAKEFVADLFRRAQGAGGGPGGGHGEGGDDPPPSPRGAPPETPPRTPGSPPGDPSPPGTPPEPGYVNYTKLRYVLEPGEPPEELEDDKISLPFVVTDLTGRSLRPLRERATAQGQFLTVEQLTLDFEYVINEVIRKDAAWARQFCSFSDYDIVILEVCPETSQVVINIGLLLLAFPSPDGQGQLRPRTYHTSLKVAWDLNSGAFTTVGVGDLSEVRGQTRLFPEGSGGQRALHLDRAVTPGDTWGHTWILL
SIO_010081: DCAF15
subclass of: SO_0000673
so part of: DCAF15
location: join(90608..90736,91110..91207,91709..91841,92060..92166,92260..92396,92929..93099,93549..93989,94097..94188,94279..94407,94801..94886,94954..95058,96236..96332)
location: region:90608-96332:1
so has part: feature:90608-90736:1:exon
so has part: feature:91110-91207:1:exon
so has part: feature:91709-91841:1:exon
so has part: feature:92060-92166:1:exon
so has part: feature:92260-92396:1:exon
so has part: feature:92929-93099:1:exon
so has part: feature:93549-93989:1:exon
so has part: feature:94097-94188:1:exon
so has part: feature:94279-94407:1:exon
so has part: feature:94801-94886:1:exon
so has part: feature:94954-95058:1:exon
so has part: feature:96236-96332:1:exon

XP_032601490.2
type: Protein
SIO_000068: ncbiprotein

position:90608:1
position: 90608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:96332:1
position: 96332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90608-90736:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:91110-91207:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:91709-91841:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:92060-92166:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:92260-92396:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:92929-93099:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:93549-93989:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:94097-94188:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:94279-94407:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:94801-94886:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:94954-95058:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:96236-96332:1:exon

DCAF15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: DCAF15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DDB1- and CUL4-associated factor 15 isoform X1
translation: MAPSSKAERGGPGGKRGTAGPAAAGTAPRGRREHLVRQLDRVRLSGQLSPRLFRKLPPRVCVALKSIVDVEFLWAGHIFLGFSKCGRYVLSYTSSSGDDFSFYLYHLYWWEFNVHSKLRLVRQVRLFQGEEIYSDLYLTVCEWPGDSDMVIVFGFNTRSAPGLQVSAMLMSDENHRDIYVSAVAVPPTRHCPACRRGAETPGEAPRACLRHGFLLHTKFQVVYPFPTFQPAFQLRKDHVVLLNTSFSLVACAIAVHPAGDSSPQQILYRRRNLLGPGRRGENAPPEPPEQLEGSGGAPPAAQPPPGPPQPPELPPGPPSLAVAKAKEFVADLFRRAQGAGGGPGGGHGEGGDDPPPSPRGAPPETPPRTPGSPPGDPSPPGTPPEPGYVNYTKLRYVLEPGEPPEELEDDKISLPFVVTDLTGRSLRPLRERATAQGQFLTVEQLTLDFEYVINEVIRKDAAWARQFCSFSDYDIVILEVCPETSQVVINIGLLLLAFPSPDGQGQLRPRTYHTSLKVAWDLNSGAFTTVGVGDLSEVRGQTSGSVWSSYRKGCVDTVMRWLVPEAPGRGVHRMTNEALHKGCSLKVLADNERYTWIVL
SIO_010081: DCAF15
subclass of: SO_0000673
so part of: DCAF15
location: join(90608..90736,91110..91207,91709..91841,92060..92166,92260..92396,92929..93099,93549..93989,94097..94188,94279..94407,94801..94886,94954..95058,95663..95778,96236..96291)
location: region:90608-96291:1
so has part: feature:90608-90736:1:exon
so has part: feature:91110-91207:1:exon
so has part: feature:91709-91841:1:exon
so has part: feature:92060-92166:1:exon
so has part: feature:92260-92396:1:exon
so has part: feature:92929-93099:1:exon
so has part: feature:93549-93989:1:exon
so has part: feature:94097-94188:1:exon
so has part: feature:94279-94407:1:exon
so has part: feature:94801-94886:1:exon
so has part: feature:94954-95058:1:exon
so has part: feature:95663-95778:1:exon
so has part: feature:96236-96291:1:exon

XP_032601488.2
type: Protein
SIO_000068: ncbiprotein

position:96291:1
position: 96291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90608-90736:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:91110-91207:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:91709-91841:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:92060-92166:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:92260-92396:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:92929-93099:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:93549-93989:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:94097-94188:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:94279-94407:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:94801-94886:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:94954-95058:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:95663-95778:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:96236-96291:1:exon

DCAF15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: DCAF15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DDB1- and CUL4-associated factor 15 isoform X2
translation: MAPSSKAERGGPGGKRGTAGPAAAGTAPRGRREHLVRQLDRVRLSGQLSPRLFRKLPPRVCVALKSIVDVEFLWAGHIFLGFSKCGRYVLSYTSSSGDDFSFYLYHLYWWEFNVHSKLRLVRQVRLFQGEEIYSDLYLTVCEWPGDSDMVIVFGFNTRSAPGLQVSAMLMSDENHRDIYVSAVAVPPTRHCPACRRGAETPGEAPRACLRHGFLLHTKFQVVYPFPTFQPAFQLRKDHVVLLNTSFSLVACAIAVHPAGDSSPQQILYRRRNLLGPGRRGENAPPEPPEQLEGSGGAPPAAQPPPGPPQPPELPPGPPSLAVAKAKEFVADLFRRAQGAGGGPGGGHGEGGDDPPPSPRGAPPETPPRTPGSPPGDPSPPGTPPEPGYVNYTKLRYVLEPGEPPEELEDDKISLPFVVTDLTGRSLRPLRERATAQGQFLTVEQLTLDFEYVINEVIRKDAAWARQFCSFSDYDIVILEVCPETSQVVINIGLLLLAFPSPDGQGQLRPRTYHTSLKVAWDLNSGAFTTVGVGDLSEVRGQTSVWSSYRKGCVDTVMRWLVPEAPGRGVHRMTNEALHKGCSLKVLADNERYTWIVL
SIO_010081: DCAF15
subclass of: SO_0000673
so part of: DCAF15
location: join(90608..90736,91110..91207,91709..91841,92060..92166,92260..92396,92929..93099,93549..93989,94097..94188,94279..94407,94801..94886,94954..95058,95669..95778,96236..96291)
location: region:90608-96291:1
so has part: feature:90608-90736:1:exon
so has part: feature:91110-91207:1:exon
so has part: feature:91709-91841:1:exon
so has part: feature:92060-92166:1:exon
so has part: feature:92260-92396:1:exon
so has part: feature:92929-93099:1:exon
so has part: feature:93549-93989:1:exon
so has part: feature:94097-94188:1:exon
so has part: feature:94279-94407:1:exon
so has part: feature:94801-94886:1:exon
so has part: feature:94954-95058:1:exon
so has part: feature:95669-95778:1:exon
so has part: feature:96236-96291:1:exon

XP_032601489.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:90608-90736:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:91110-91207:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:91709-91841:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:92060-92166:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:92260-92396:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:92929-93099:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:93549-93989:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:94097-94188:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:94279-94407:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:94801-94886:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:94954-95058:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:95669-95778:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:96236-96291:1:exon

RFX1
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: RFX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(97169..106601)
location: region:97169-106601:-1
so has part: feature:97169-106601:-1:exon
subclass of: SO_0000010

115491714
type: Gene
SIO_000068: ncbigene

position:97169:-1
position: 97169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:106601:-1
position: 106601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:97169-106601:-1:exon

RFX1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: RFX1
product: regulatory factor X1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_041711810.1
SIO_010081: RFX1
subclass of: SO_0000673
so part of: RFX1
location: complement(join(97169..97868,98522..98567,99226..99379,99821..100029,100435..100584,100912..101009,101512..101663,101921..102009,102089..102207,102285..102400,102478..102597,103240..103421,103844..104232,104414..104499,105362..105450,105537..105736,106140..106601))
location: region:97169-106601:-1
so has part: feature:106140-106601:-1:exon
so has part: feature:105537-105736:-1:exon
so has part: feature:105362-105450:-1:exon
so has part: feature:104414-104499:-1:exon
so has part: feature:103844-104232:-1:exon
so has part: feature:103240-103421:-1:exon
so has part: feature:102478-102597:-1:exon
so has part: feature:102285-102400:-1:exon
so has part: feature:102089-102207:-1:exon
so has part: feature:101921-102009:-1:exon
so has part: feature:101512-101663:-1:exon
so has part: feature:100912-101009:-1:exon
so has part: feature:100435-100584:-1:exon
so has part: feature:99821-100029:-1:exon
so has part: feature:99226-99379:-1:exon
so has part: feature:98522-98567:-1:exon
so has part: feature:97169-97868:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:106140-106601:-1:exon

position:106140:-1
position: 106140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:105537-105736:-1:exon

position:105537:-1
position: 105537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:105736:-1
position: 105736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:105362-105450:-1:exon

position:105362:-1
position: 105362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:105450:-1
position: 105450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:104414-104499:-1:exon

position:104414:-1
position: 104414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:104499:-1
position: 104499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:103844-104232:-1:exon

position:103844:-1
position: 103844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:104232:-1
position: 104232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:103240-103421:-1:exon

position:103240:-1
position: 103240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:103421:-1
position: 103421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:102478-102597:-1:exon

position:102478:-1
position: 102478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:102597:-1
position: 102597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:102285-102400:-1:exon

position:102285:-1
position: 102285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:102400:-1
position: 102400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:102089-102207:-1:exon

position:102089:-1
position: 102089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:102207:-1
position: 102207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:101921-102009:-1:exon

position:101921:-1
position: 101921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:102009:-1
position: 102009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:101512-101663:-1:exon

position:101512:-1
position: 101512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:101663:-1
position: 101663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:100912-101009:-1:exon

position:100912:-1
position: 100912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:101009:-1
position: 101009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:100435-100584:-1:exon

position:100435:-1
position: 100435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:100584:-1
position: 100584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:99821-100029:-1:exon

position:99821:-1
position: 99821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:100029:-1
position: 100029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:99226-99379:-1:exon

position:99226:-1
position: 99226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:99379:-1
position: 99379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:98522-98567:-1:exon

position:98522:-1
position: 98522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:98567:-1
position: 98567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:97169-97868:-1:exon

position:97868:-1
position: 97868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RFX1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: RFX1
product: regulatory factor X1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_041711811.1
SIO_010081: RFX1
subclass of: SO_0000673
so part of: RFX1
location: complement(join(97169..97868,98522..98567,99226..99379,99821..100029,100435..100584,100912..101009,101512..101663,101921..102009,102089..102207,102285..102400,102478..102597,103240..103421,103844..104232,104414..104499,105362..105450,105537..105776))
location: region:97169-105776:-1
so has part: feature:105537-105776:-1:exon
so has part: feature:105362-105450:-1:exon
so has part: feature:104414-104499:-1:exon
so has part: feature:103844-104232:-1:exon
so has part: feature:103240-103421:-1:exon
so has part: feature:102478-102597:-1:exon
so has part: feature:102285-102400:-1:exon
so has part: feature:102089-102207:-1:exon
so has part: feature:101921-102009:-1:exon
so has part: feature:101512-101663:-1:exon
so has part: feature:100912-101009:-1:exon
so has part: feature:100435-100584:-1:exon
so has part: feature:99821-100029:-1:exon
so has part: feature:99226-99379:-1:exon
so has part: feature:98522-98567:-1:exon
so has part: feature:97169-97868:-1:exon

position:105776:-1
position: 105776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:105537-105776:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:105362-105450:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:104414-104499:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:103844-104232:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:103240-103421:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:102478-102597:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:102285-102400:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:102089-102207:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:101921-102009:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:101512-101663:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:100912-101009:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:100435-100584:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:99821-100029:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:99226-99379:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:98522-98567:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:97169-97868:-1:exon

RFX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: RFX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MHC class II regulatory factor RFX1
translation: MATQPSYVTEMTAAATSQPQPPSAPPPAGPAPFGAELAGGSAPGAPPPAAPAPPPPSSSWSPWPQRGCDPRRAPRAAPRPPRPPSPGPAPAGSRCSSSPRCSTSSPPPSWRGGMGPTPPPAASARARSPSPRRRSSLRTRGATSRGGEGRPRCSPAPPRPLPPPRRRPLPPPARSPPPAAPPCPCTWRGGRGGRSFWGAPPPPLPPPRGPRRPPGGGGASGTPGGGTFVIQGGYVGGTGAAYAHTTRASPATVQWLLDNYETAEGVSLPRSALYCHYLLHCQGHKLEPVNAASFGKLIRSVFMGLRTRRLGTRGNSKYHYYGLRIKAGSPLLRLVEDQQHLAMRQQPFAQKQRLKPVQKMEGGVTNGVSSAPAAPGVPDISAQVQQYQQFLDASRSLPEFPEIDVQGKGLPEGAGLEDLRAFQQLYREHCEAIVDVMINLQFSLVETLWKSFWRCSGESDAQEEAERRLPRRRLLLLARLEPVLRWVRDCDHALYQGLVEILVPDVLRPIPSALTQAIRNFAKSLESWLGNAMVSMPEELVRVKAAAAGAFAQTLRRYTSLNHLAQAARAVLQNTAQISQMLSDLNRVDFANVQEQAAWVCRCEARVVQRLEQDFKATLGQQHSLEQWAAWLDAVVARVLRPHLGTPGLPRAAKLFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMYYLVEQRVARARGTCPIAVMGEFANLTSSLNPQDPDKEEDEEEEEEESEEELPAELGLGGGAGPPGARPEPPPEPPLEPPPPKAARADPRGLLVPALPSR
SIO_010081: RFX1
subclass of: SO_0000673
so part of: RFX1
location: complement(join(97678..97868,98522..98567,99226..99379,99821..100029,100435..100584,100912..101009,101512..101663,101921..102009,102089..102207,102285..102400,102478..102597,103240..103421,103844..104232,104414..104499,105362..105450,105537..105728))
location: region:97678-105728:-1
so has part: feature:105537-105728:-1:exon
so has part: feature:105362-105450:-1:exon
so has part: feature:104414-104499:-1:exon
so has part: feature:103844-104232:-1:exon
so has part: feature:103240-103421:-1:exon
so has part: feature:102478-102597:-1:exon
so has part: feature:102285-102400:-1:exon
so has part: feature:102089-102207:-1:exon
so has part: feature:101921-102009:-1:exon
so has part: feature:101512-101663:-1:exon
so has part: feature:100912-101009:-1:exon
so has part: feature:100435-100584:-1:exon
so has part: feature:99821-100029:-1:exon
so has part: feature:99226-99379:-1:exon
so has part: feature:98522-98567:-1:exon
so has part: feature:97678-97868:-1:exon

XP_041567744.1
type: Protein
SIO_000068: ncbiprotein

position:97678:-1
position: 97678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:105728:-1
position: 105728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:105537-105728:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:105362-105450:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:104414-104499:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:103844-104232:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:103240-103421:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:102478-102597:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:102285-102400:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:102089-102207:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:101921-102009:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:101512-101663:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:100912-101009:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:100435-100584:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:99821-100029:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:99226-99379:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:98522-98567:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:97678-97868:-1:exon

RFX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: RFX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MHC class II regulatory factor RFX1
translation: MATQPSYVTEMTAAATSQPQPPSAPPPAGPAPFGAELAGGSAPGAPPPAAPAPPPPSSSWSPWPQRGCDPRRAPRAAPRPPRPPSPGPAPAGSRCSSSPRCSTSSPPPSWRGGMGPTPPPAASARARSPSPRRRSSLRTRGATSRGGEGRPRCSPAPPRPLPPPRRRPLPPPARSPPPAAPPCPCTWRGGRGGRSFWGAPPPPLPPPRGPRRPPGGGGASGTPGGGTFVIQGGYVGGTGAAYAHTTRASPATVQWLLDNYETAEGVSLPRSALYCHYLLHCQGHKLEPVNAASFGKLIRSVFMGLRTRRLGTRGNSKYHYYGLRIKAGSPLLRLVEDQQHLAMRQQPFAQKQRLKPVQKMEGGVTNGVSSAPAAPGVPDISAQVQQYQQFLDASRSLPEFPEIDVQGKGLPEGAGLEDLRAFQQLYREHCEAIVDVMINLQFSLVETLWKSFWRCSGESDAQEEAERRLPRRRLLLLARLEPVLRWVRDCDHALYQGLVEILVPDVLRPIPSALTQAIRNFAKSLESWLGNAMVSMPEELVRVKAAAAGAFAQTLRRYTSLNHLAQAARAVLQNTAQISQMLSDLNRVDFANVQEQAAWVCRCEARVVQRLEQDFKATLGQQHSLEQWAAWLDAVVARVLRPHLGTPGLPRAAKLFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMYYLVEQRVARARGTCPIAVMGEFANLTSSLNPQDPDKEEDEEEEEEESEEELPAELGLGGGAGPPGARPEPPPEPPLEPPPPKAARADPRGLLVPALPSR
SIO_010081: RFX1
subclass of: SO_0000673
so part of: RFX1
location: complement(join(97678..97868,98522..98567,99226..99379,99821..100029,100435..100584,100912..101009,101512..101663,101921..102009,102089..102207,102285..102400,102478..102597,103240..103421,103844..104232,104414..104499,105362..105450,105537..105728))
location: region:97678-105728:-1
so has part: feature:105537-105728:-1:exon
so has part: feature:105362-105450:-1:exon
so has part: feature:104414-104499:-1:exon
so has part: feature:103844-104232:-1:exon
so has part: feature:103240-103421:-1:exon
so has part: feature:102478-102597:-1:exon
so has part: feature:102285-102400:-1:exon
so has part: feature:102089-102207:-1:exon
so has part: feature:101921-102009:-1:exon
so has part: feature:101512-101663:-1:exon
so has part: feature:100912-101009:-1:exon
so has part: feature:100435-100584:-1:exon
so has part: feature:99821-100029:-1:exon
so has part: feature:99226-99379:-1:exon
so has part: feature:98522-98567:-1:exon
so has part: feature:97678-97868:-1:exon

XP_041567745.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:105537-105728:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:105362-105450:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:104414-104499:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:103844-104232:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:103240-103421:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:102478-102597:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:102285-102400:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:102089-102207:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:101921-102009:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:101512-101663:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:100912-101009:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:100435-100584:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:99821-100029:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:99226-99379:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:98522-98567:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:97678-97868:-1:exon

LOC115491796
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC115491796
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 106737..111322
location: region:106737-111322:1
so has part: feature:106737-111322:1:exon
subclass of: SO_0000010

115491796
type: Gene
SIO_000068: ncbigene

position:106737:1
position: 106737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:111322:1
position: 111322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:106737-111322:1:exon

LOC115491796
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC115491796
product: caseinolytic mitochondrial matrix peptidase proteolytic subunit, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 76 samples with support for all annotated introns
transcript id: XM_032745600.2
SIO_010081: LOC115491796
subclass of: SO_0000673
so part of: LOC115491796
location: join(106737..106931,107400..107495,107972..108043,108340..108436,109843..110030,110630..110735,111091..111322)
location: region:106737-111322:1
so has part: feature:106737-106931:1:exon
so has part: feature:107400-107495:1:exon
so has part: feature:107972-108043:1:exon
so has part: feature:108340-108436:1:exon
so has part: feature:109843-110030:1:exon
so has part: feature:110630-110735:1:exon
so has part: feature:111091-111322:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:106737-106931:1:exon

position:106931:1
position: 106931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:107400-107495:1:exon

position:107400:1
position: 107400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:107495:1
position: 107495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:107972-108043:1:exon

position:107972:1
position: 107972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108043:1
position: 108043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:108340-108436:1:exon

position:108340:1
position: 108340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108436:1
position: 108436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:109843-110030:1:exon

position:109843:1
position: 109843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:110030:1
position: 110030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:110630-110735:1:exon

position:110630:1
position: 110630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:110735:1
position: 110735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:111091-111322:1:exon

position:111091:1
position: 111091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115491796
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC115491796
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP-dependent Clp protease proteolytic subunit, mitochondrial isoform X1
translation: MAKGPKLLQNSYSGAGPAPVVREEPCALLPRWLWAGVRRRLHGTGATPAPPPPLIPIVVEQTGRGERAYDIYSRLLRERIVCVMGPIDDSLASLVIAQLLFLQSESNKKPIHMYINSPGGSVTSGLAIYDTMQYVLSPVCTWCVGQAASMGSLLLAAGRPGLRHALPNARIMVHQPSGGARGQATDIAIQAEEILQLKRQINGLYAKHTGQPLPVIEAAMERDRYLSPLEARDFGLLDQVLVHPPARGQDEPRVLPRDPPPSPPSPPGPPQSPPGAS
SIO_010081: LOC115491796
subclass of: SO_0000673
so part of: LOC115491796
location: join(106842..106931,107400..107495,107972..108043,108340..108436,109843..110030,110630..110735,111091..111275)
location: region:106842-111275:1
so has part: feature:106842-106931:1:exon
so has part: feature:107400-107495:1:exon
so has part: feature:107972-108043:1:exon
so has part: feature:108340-108436:1:exon
so has part: feature:109843-110030:1:exon
so has part: feature:110630-110735:1:exon
so has part: feature:111091-111275:1:exon

XP_032601491.2
type: Protein
SIO_000068: ncbiprotein

position:106842:1
position: 106842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:111275:1
position: 111275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:106842-106931:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:107400-107495:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:107972-108043:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:108340-108436:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:109843-110030:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:110630-110735:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:111091-111275:1:exon

LOC115491796
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC115491796
product: caseinolytic mitochondrial matrix peptidase proteolytic subunit, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 78 samples with support for all annotated introns
transcript id: XM_032745601.2
SIO_010081: LOC115491796
subclass of: SO_0000673
so part of: LOC115491796
location: join(107025..107117,107400..107495,107972..108043,108340..108436,109843..110030,110630..110735,111091..111322)
location: region:107025-111322:1
so has part: feature:107025-107117:1:exon
so has part: feature:107400-107495:1:exon
so has part: feature:107972-108043:1:exon
so has part: feature:108340-108436:1:exon
so has part: feature:109843-110030:1:exon
so has part: feature:110630-110735:1:exon
so has part: feature:111091-111322:1:exon

position:107025:1
position: 107025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:107025-107117:1:exon

position:107117:1
position: 107117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:107400-107495:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:107972-108043:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:108340-108436:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:109843-110030:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:110630-110735:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:111091-111322:1:exon

LOC115491796
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC115491796
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP-dependent Clp protease proteolytic subunit, mitochondrial isoform X2
translation: MGPGAARWLWAGVRRRLHGTGATPAPPPPLIPIVVEQTGRGERAYDIYSRLLRERIVCVMGPIDDSLASLVIAQLLFLQSESNKKPIHMYINSPGGSVTSGLAIYDTMQYVLSPVCTWCVGQAASMGSLLLAAGRPGLRHALPNARIMVHQPSGGARGQATDIAIQAEEILQLKRQINGLYAKHTGQPLPVIEAAMERDRYLSPLEARDFGLLDQVLVHPPARGQDEPRVLPRDPPPSPPSPPGPPQSPPGAS
SIO_010081: LOC115491796
subclass of: SO_0000673
so part of: LOC115491796
location: join(107100..107117,107400..107495,107972..108043,108340..108436,109843..110030,110630..110735,111091..111275)
location: region:107100-111275:1
so has part: feature:107100-107117:1:exon
so has part: feature:107400-107495:1:exon
so has part: feature:107972-108043:1:exon
so has part: feature:108340-108436:1:exon
so has part: feature:109843-110030:1:exon
so has part: feature:110630-110735:1:exon
so has part: feature:111091-111275:1:exon

XP_032601492.2
type: Protein
SIO_000068: ncbiprotein

position:107100:1
position: 107100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:107100-107117:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:107400-107495:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:107972-108043:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:108340-108436:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:109843-110030:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:110630-110735:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:111091-111275:1:exon

ALKBH7
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: ALKBH7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 111796..114201
location: region:111796-114201:1
so has part: feature:111796-114201:1:exon
subclass of: SO_0000010

115491802
type: Gene
SIO_000068: ncbigene

position:111796:1
position: 111796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:114201:1
position: 114201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:111796-114201:1:exon

ALKBH7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: ALKBH7
product: alkB homolog 7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 122 samples with support for all annotated introns
transcript id: XM_041711835.1
SIO_010081: ALKBH7
subclass of: SO_0000673
so part of: ALKBH7
location: join(111796..112086,112428..112598,113226..113350,113431..113549,114114..114201)
location: region:111796-114201:1
so has part: feature:111796-112086:1:exon
so has part: feature:112428-112598:1:exon
so has part: feature:113226-113350:1:exon
so has part: feature:113431-113549:1:exon
so has part: feature:114114-114201:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:111796-112086:1:exon

position:112086:1
position: 112086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:112428-112598:1:exon

position:112428:1
position: 112428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:112598:1
position: 112598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:113226-113350:1:exon

position:113226:1
position: 113226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:113350:1
position: 113350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:113431-113549:1:exon

position:113431:1
position: 113431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:113549:1
position: 113549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:114114-114201:1:exon

position:114114:1
position: 114114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ALKBH7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: ALKBH7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-ketoglutarate-dependent dioxygenase alkB homolog 7, mitochondrial
translation: MLRAALGALRARSGCPGPGPVRAVAGPGPGPVAVAGPGPGLVRGSRPELLRRLRGLARVRGEFVSEEEAAALLAEVEPALRRGRYQSDHWDRAISGYRETERALGGPAGGALLLRVTPEFPPRSPPRARAHVLDLQPGGRVGPHVDSVKFCGCTIAGLSLLSASVLRLRSLRDPRDHLELLLPPRSLYVLRGAARYEFTHEILGDEESFFGGLRVPRGRRVALIFRNDPPETPPEPLGDLPAFIEDPQDPPPK
SIO_010081: ALKBH7
subclass of: SO_0000673
so part of: ALKBH7
location: join(111811..112086,112428..112598,113226..113350,113431..113549,114114..114184)
location: region:111811-114184:1
so has part: feature:111811-112086:1:exon
so has part: feature:112428-112598:1:exon
so has part: feature:113226-113350:1:exon
so has part: feature:113431-113549:1:exon
so has part: feature:114114-114184:1:exon

XP_041567769.1
type: Protein
SIO_000068: ncbiprotein

position:111811:1
position: 111811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:114184:1
position: 114184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:111811-112086:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:112428-112598:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:113226-113350:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:113431-113549:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:114114-114184:1:exon

GTF2F1
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: GTF2F1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(116475..122941)
location: region:116475-122941:-1
so has part: feature:116475-122941:-1:exon
subclass of: SO_0000010

121468332
type: Gene
SIO_000068: ncbigene

position:116475:-1
position: 116475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:122941:-1
position: 122941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:116475-122941:-1:exon

GTF2F1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: GTF2F1
product: general transcription factor IIF subunit 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_041711819.1
SIO_010081: GTF2F1
subclass of: SO_0000673
so part of: GTF2F1
location: complement(join(116475..116722,117227..117347,117823..117961,118373..118446,118532..118648,118730..118791,119099..119252,119689..119873,120563..120733,121050..121243,121896..121968,122493..122542,122870..122941))
location: region:116475-122941:-1
so has part: feature:122870-122941:-1:exon
so has part: feature:122493-122542:-1:exon
so has part: feature:121896-121968:-1:exon
so has part: feature:121050-121243:-1:exon
so has part: feature:120563-120733:-1:exon
so has part: feature:119689-119873:-1:exon
so has part: feature:119099-119252:-1:exon
so has part: feature:118730-118791:-1:exon
so has part: feature:118532-118648:-1:exon
so has part: feature:118373-118446:-1:exon
so has part: feature:117823-117961:-1:exon
so has part: feature:117227-117347:-1:exon
so has part: feature:116475-116722:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:122870-122941:-1:exon

position:122870:-1
position: 122870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:122493-122542:-1:exon

position:122493:-1
position: 122493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:122542:-1
position: 122542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:121896-121968:-1:exon

position:121896:-1
position: 121896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:121968:-1
position: 121968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:121050-121243:-1:exon

position:121050:-1
position: 121050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:121243:-1
position: 121243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:120563-120733:-1:exon

position:120563:-1
position: 120563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:120733:-1
position: 120733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:119689-119873:-1:exon

position:119689:-1
position: 119689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:119873:-1
position: 119873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:119099-119252:-1:exon

position:119099:-1
position: 119099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:119252:-1
position: 119252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:118730-118791:-1:exon

position:118730:-1
position: 118730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:118791:-1
position: 118791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:118532-118648:-1:exon

position:118532:-1
position: 118532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:118648:-1
position: 118648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:118373-118446:-1:exon

position:118373:-1
position: 118373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:118446:-1
position: 118446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:117823-117961:-1:exon

position:117823:-1
position: 117823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:117961:-1
position: 117961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:117227-117347:-1:exon

position:117227:-1
position: 117227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:117347:-1
position: 117347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:116475-116722:-1:exon

position:116722:-1
position: 116722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GTF2F1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: GTF2F1
product: general transcription factor IIF subunit 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_041711818.1
SIO_010081: GTF2F1
subclass of: SO_0000673
so part of: GTF2F1
location: complement(join(116475..116722,117227..117347,117823..117961,118373..118446,118532..118648,118730..118794,119099..119252,119689..119873,120563..120733,121050..121243,121896..121968,122493..122542,122870..122941))
location: region:116475-122941:-1
so has part: feature:122870-122941:-1:exon
so has part: feature:122493-122542:-1:exon
so has part: feature:121896-121968:-1:exon
so has part: feature:121050-121243:-1:exon
so has part: feature:120563-120733:-1:exon
so has part: feature:119689-119873:-1:exon
so has part: feature:119099-119252:-1:exon
so has part: feature:118730-118794:-1:exon
so has part: feature:118532-118648:-1:exon
so has part: feature:118373-118446:-1:exon
so has part: feature:117823-117961:-1:exon
so has part: feature:117227-117347:-1:exon
so has part: feature:116475-116722:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:122870-122941:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:122493-122542:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:121896-121968:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:121050-121243:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:120563-120733:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:119689-119873:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:119099-119252:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:118730-118794:-1:exon

position:118794:-1
position: 118794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:118532-118648:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:118373-118446:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:117823-117961:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:117227-117347:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:116475-116722:-1:exon

GTF2F1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: GTF2F1
product: general transcription factor IIF subunit 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_041711820.1
SIO_010081: GTF2F1
subclass of: SO_0000673
so part of: GTF2F1
location: complement(join(116475..116722,117227..117347,117823..117961,118373..118446,118532..118648,118730..118794,119099..119252,119689..119873,120563..120733,121050..121243,121896..121968,122493..122539,122870..122909))
location: region:116475-122909:-1
so has part: feature:122870-122909:-1:exon
so has part: feature:122493-122539:-1:exon
so has part: feature:121896-121968:-1:exon
so has part: feature:121050-121243:-1:exon
so has part: feature:120563-120733:-1:exon
so has part: feature:119689-119873:-1:exon
so has part: feature:119099-119252:-1:exon
so has part: feature:118730-118794:-1:exon
so has part: feature:118532-118648:-1:exon
so has part: feature:118373-118446:-1:exon
so has part: feature:117823-117961:-1:exon
so has part: feature:117227-117347:-1:exon
so has part: feature:116475-116722:-1:exon

position:122909:-1
position: 122909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:122870-122909:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:122493-122539:-1:exon

position:122539:-1
position: 122539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:121896-121968:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:121050-121243:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:120563-120733:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:119689-119873:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:119099-119252:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:118730-118794:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:118532-118648:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:118373-118446:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:117823-117961:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:117227-117347:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:116475-116722:-1:exon

GTF2F1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: GTF2F1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: general transcription factor IIF subunit 1 isoform X3
translation: MTALGSSSQVVSEFVVRVPRSSPKRYNIMAFNSADRVSLSTWAQARMERDMSNKRIYAEEELPESGAGSEFHRRLREEARRKKLGIVLREFRAEDQPWLLRVNGKGGRRFRGVKKGGVTENASYYIFTQCPDGAFEAFPVRSWYNFTPLARHRTLTAEEAEEEWERRNKVLNHFSIMQQRRLRDQDEEEEEKEKGRKAPGKGGGLRIHDLEEDLELSSEDSEGSEAEGEKAARPKAAGGRPGRRRRRKGRKGSEDEALEDSDDGDFEGQEVDYMSDGSSSSGEEEPGKAQAPKEEEEGPKGIDEASESSEESEEEKAEEKEEEEEGKATPTPQEKKKKRESSDESQTSEESDIDSEANSALFMAKKKTPPKRERRASGGSSRGGSRPGTPPTDPGGTGGTLRAAAARLEQGRRAAPGGSEPPQKRLKAEPGPPPGKGTAQSHPGKCAASSGEVQLTEEAVRRYLSRKPMTTKDLLKKFQTKRTGLSSDATVNALAQLLKRLDPERKLIADKMHFFLKE
SIO_010081: GTF2F1
subclass of: SO_0000673
so part of: GTF2F1
location: complement(join(116518..116722,117227..117347,117823..117961,118373..118446,118532..118648,118730..118794,119099..119252,119689..119873,120563..120733,121050..121243,121896..121968,122493..122539,122870..122881))
location: region:116518-122881:-1
so has part: feature:122870-122881:-1:exon
so has part: feature:122493-122539:-1:exon
so has part: feature:121896-121968:-1:exon
so has part: feature:121050-121243:-1:exon
so has part: feature:120563-120733:-1:exon
so has part: feature:119689-119873:-1:exon
so has part: feature:119099-119252:-1:exon
so has part: feature:118730-118794:-1:exon
so has part: feature:118532-118648:-1:exon
so has part: feature:118373-118446:-1:exon
so has part: feature:117823-117961:-1:exon
so has part: feature:117227-117347:-1:exon
so has part: feature:116518-116722:-1:exon

XP_041567754.1
type: Protein
SIO_000068: ncbiprotein

position:116518:-1
position: 116518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:122881:-1
position: 122881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:122870-122881:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:122493-122539:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:121896-121968:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:121050-121243:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:120563-120733:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:119689-119873:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:119099-119252:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:118730-118794:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:118532-118648:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:118373-118446:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:117823-117961:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:117227-117347:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:116518-116722:-1:exon

GTF2F1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: GTF2F1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: general transcription factor IIF subunit 1 isoform X2
translation: MTALQGSSSQVVSEFVVRVPRSSPKRYNIMAFNSADRVSLSTWAQARMERDMSNKRIYAEEELPESGAGSEFHRRLREEARRKKLGIVLREFRAEDQPWLLRVNGKGGRRFRGVKKGGVTENASYYIFTQCPDGAFEAFPVRSWYNFTPLARHRTLTAEEAEEEWERRNKVLNHFSIMQQRRLRDQDEEEEEKEKGRKAPGKGGGLRIHDLEEDLELSSEDSEGSEAEGEKAARPKAAGGRPGRRRRRKGRKGSEDEALEDSDDGDFEGQEVDYMSDGSSSGEEEPGKAQAPKEEEEGPKGIDEASESSEESEEEKAEEKEEEEEGKATPTPQEKKKKRESSDESQTSEESDIDSEANSALFMAKKKTPPKRERRASGGSSRGGSRPGTPPTDPGGTGGTLRAAAARLEQGRRAAPGGSEPPQKRLKAEPGPPPGKGTAQSHPGKCAASSGEVQLTEEAVRRYLSRKPMTTKDLLKKFQTKRTGLSSDATVNALAQLLKRLDPERKLIADKMHFFLKE
SIO_010081: GTF2F1
subclass of: SO_0000673
so part of: GTF2F1
location: complement(join(116518..116722,117227..117347,117823..117961,118373..118446,118532..118648,118730..118791,119099..119252,119689..119873,120563..120733,121050..121243,121896..121968,122493..122542,122870..122881))
location: region:116518-122881:-1
so has part: feature:122870-122881:-1:exon
so has part: feature:122493-122542:-1:exon
so has part: feature:121896-121968:-1:exon
so has part: feature:121050-121243:-1:exon
so has part: feature:120563-120733:-1:exon
so has part: feature:119689-119873:-1:exon
so has part: feature:119099-119252:-1:exon
so has part: feature:118730-118791:-1:exon
so has part: feature:118532-118648:-1:exon
so has part: feature:118373-118446:-1:exon
so has part: feature:117823-117961:-1:exon
so has part: feature:117227-117347:-1:exon
so has part: feature:116518-116722:-1:exon

XP_041567753.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:122870-122881:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:122493-122542:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:121896-121968:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:121050-121243:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:120563-120733:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:119689-119873:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:119099-119252:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:118730-118791:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:118532-118648:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:118373-118446:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:117823-117961:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:117227-117347:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:116518-116722:-1:exon

GTF2F1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: GTF2F1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: general transcription factor IIF subunit 1 isoform X1
translation: MTALQGSSSQVVSEFVVRVPRSSPKRYNIMAFNSADRVSLSTWAQARMERDMSNKRIYAEEELPESGAGSEFHRRLREEARRKKLGIVLREFRAEDQPWLLRVNGKGGRRFRGVKKGGVTENASYYIFTQCPDGAFEAFPVRSWYNFTPLARHRTLTAEEAEEEWERRNKVLNHFSIMQQRRLRDQDEEEEEKEKGRKAPGKGGGLRIHDLEEDLELSSEDSEGSEAEGEKAARPKAAGGRPGRRRRRKGRKGSEDEALEDSDDGDFEGQEVDYMSDGSSSSGEEEPGKAQAPKEEEEGPKGIDEASESSEESEEEKAEEKEEEEEGKATPTPQEKKKKRESSDESQTSEESDIDSEANSALFMAKKKTPPKRERRASGGSSRGGSRPGTPPTDPGGTGGTLRAAAARLEQGRRAAPGGSEPPQKRLKAEPGPPPGKGTAQSHPGKCAASSGEVQLTEEAVRRYLSRKPMTTKDLLKKFQTKRTGLSSDATVNALAQLLKRLDPERKLIADKMHFFLKE
SIO_010081: GTF2F1
subclass of: SO_0000673
so part of: GTF2F1
location: complement(join(116518..116722,117227..117347,117823..117961,118373..118446,118532..118648,118730..118794,119099..119252,119689..119873,120563..120733,121050..121243,121896..121968,122493..122542,122870..122881))
location: region:116518-122881:-1
so has part: feature:122870-122881:-1:exon
so has part: feature:122493-122542:-1:exon
so has part: feature:121896-121968:-1:exon
so has part: feature:121050-121243:-1:exon
so has part: feature:120563-120733:-1:exon
so has part: feature:119689-119873:-1:exon
so has part: feature:119099-119252:-1:exon
so has part: feature:118730-118794:-1:exon
so has part: feature:118532-118648:-1:exon
so has part: feature:118373-118446:-1:exon
so has part: feature:117823-117961:-1:exon
so has part: feature:117227-117347:-1:exon
so has part: feature:116518-116722:-1:exon

XP_041567752.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:122870-122881:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:122493-122542:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:121896-121968:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:121050-121243:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:120563-120733:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:119689-119873:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:119099-119252:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:118730-118794:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:118532-118648:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:118373-118446:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:117823-117961:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:117227-117347:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:116518-116722:-1:exon

GTF2F1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: GTF2F1
product: general transcription factor IIF subunit 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 82 samples with support for all annotated introns
transcript id: XM_041711821.1
SIO_010081: GTF2F1
subclass of: SO_0000673
so part of: GTF2F1
location: complement(join(116806..116890,117227..117347,117823..117961,118373..118446,118532..118648,118730..118794,119099..119252,119689..119873,120563..120733,121050..121243,121896..121968,122493..122542,122870..122941))
location: region:116806-122941:-1
so has part: feature:122870-122941:-1:exon
so has part: feature:122493-122542:-1:exon
so has part: feature:121896-121968:-1:exon
so has part: feature:121050-121243:-1:exon
so has part: feature:120563-120733:-1:exon
so has part: feature:119689-119873:-1:exon
so has part: feature:119099-119252:-1:exon
so has part: feature:118730-118794:-1:exon
so has part: feature:118532-118648:-1:exon
so has part: feature:118373-118446:-1:exon
so has part: feature:117823-117961:-1:exon
so has part: feature:117227-117347:-1:exon
so has part: feature:116806-116890:-1:exon

position:116806:-1
position: 116806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:122870-122941:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:122493-122542:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:121896-121968:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:121050-121243:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:120563-120733:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:119689-119873:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:119099-119252:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:118730-118794:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:118532-118648:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:118373-118446:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:117823-117961:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:117227-117347:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:116806-116890:-1:exon

position:116890:-1
position: 116890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GTF2F1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: GTF2F1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: general transcription factor IIF subunit 1 isoform X4
translation: MTALQGSSSQVVSEFVVRVPRSSPKRYNIMAFNSADRVSLSTWAQARMERDMSNKRIYAEEELPESGAGSEFHRRLREEARRKKLGIVLREFRAEDQPWLLRVNGKGGRRFRGVKKGGVTENASYYIFTQCPDGAFEAFPVRSWYNFTPLARHRTLTAEEAEEEWERRNKVLNHFSIMQQRRLRDQDEEEEEKEKGRKAPGKGGGLRIHDLEEDLELSSEDSEGSEAEGEKAARPKAAGGRPGRRRRRKGRKGSEDEALEDSDDGDFEGQEVDYMSDGSSSSGEEEPGKAQAPKEEEEGPKGIDEASESSEESEEEKAEEKEEEEEGKATPTPQEKKKKRESSDESQTSEESDIDSEANSALFMAKKKTPPKRERRASGGSSRGGSRPGTPPTDPGGTGGTLRAAAARLEQGRRAAPGGSEPPQKRLKAEPGPPPGKGTAQSHPGKCAASSGEVQLTEEAVRRYLSRKPMTPV
SIO_010081: GTF2F1
subclass of: SO_0000673
so part of: GTF2F1
location: complement(join(116824..116890,117227..117347,117823..117961,118373..118446,118532..118648,118730..118794,119099..119252,119689..119873,120563..120733,121050..121243,121896..121968,122493..122542,122870..122881))
location: region:116824-122881:-1
so has part: feature:122870-122881:-1:exon
so has part: feature:122493-122542:-1:exon
so has part: feature:121896-121968:-1:exon
so has part: feature:121050-121243:-1:exon
so has part: feature:120563-120733:-1:exon
so has part: feature:119689-119873:-1:exon
so has part: feature:119099-119252:-1:exon
so has part: feature:118730-118794:-1:exon
so has part: feature:118532-118648:-1:exon
so has part: feature:118373-118446:-1:exon
so has part: feature:117823-117961:-1:exon
so has part: feature:117227-117347:-1:exon
so has part: feature:116824-116890:-1:exon

XP_041567755.1
type: Protein
SIO_000068: ncbiprotein

position:116824:-1
position: 116824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:122870-122881:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:122493-122542:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:121896-121968:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:121050-121243:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:120563-120733:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:119689-119873:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:119099-119252:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:118730-118794:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:118532-118648:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:118373-118446:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:117823-117961:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:117227-117347:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:116824-116890:-1:exon

LOC115491568
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC115491568
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(124852..137290)
location: region:124852-137290:-1
so has part: feature:124852-137290:-1:exon
subclass of: SO_0000010

115491568
type: Gene
SIO_000068: ncbigene

position:124852:-1
position: 124852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:137290:-1
position: 137290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:124852-137290:-1:exon

LOC115491568
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC115491568
product: KH-type splicing regulatory protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 52 samples with support for all annotated introns
transcript id: XM_041711817.1
SIO_010081: LOC115491568
subclass of: SO_0000673
so part of: LOC115491568
location: complement(join(124852..124973,125566..125732,126359..126436,126990..127181,127959..128047,128133..128251,128855..129015,129482..129623,130283..130383,131102..131204,131809..131907,132576..132674,133156..133327,134046..134103,134207..134278,134384..134433,134782..134821,135340..135378,135474..135582,137093..137290))
location: region:124852-137290:-1
so has part: feature:137093-137290:-1:exon
so has part: feature:135474-135582:-1:exon
so has part: feature:135340-135378:-1:exon
so has part: feature:134782-134821:-1:exon
so has part: feature:134384-134433:-1:exon
so has part: feature:134207-134278:-1:exon
so has part: feature:134046-134103:-1:exon
so has part: feature:133156-133327:-1:exon
so has part: feature:132576-132674:-1:exon
so has part: feature:131809-131907:-1:exon
so has part: feature:131102-131204:-1:exon
so has part: feature:130283-130383:-1:exon
so has part: feature:129482-129623:-1:exon
so has part: feature:128855-129015:-1:exon
so has part: feature:128133-128251:-1:exon
so has part: feature:127959-128047:-1:exon
so has part: feature:126990-127181:-1:exon
so has part: feature:126359-126436:-1:exon
so has part: feature:125566-125732:-1:exon
so has part: feature:124852-124973:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:137093-137290:-1:exon

position:137093:-1
position: 137093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:135474-135582:-1:exon

position:135474:-1
position: 135474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:135582:-1
position: 135582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:135340-135378:-1:exon

position:135340:-1
position: 135340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:135378:-1
position: 135378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:134782-134821:-1:exon

position:134782:-1
position: 134782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:134821:-1
position: 134821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:134384-134433:-1:exon

position:134384:-1
position: 134384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:134433:-1
position: 134433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:134207-134278:-1:exon

position:134207:-1
position: 134207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:134278:-1
position: 134278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:134046-134103:-1:exon

position:134046:-1
position: 134046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:134103:-1
position: 134103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:133156-133327:-1:exon

position:133156:-1
position: 133156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:133327:-1
position: 133327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:132576-132674:-1:exon

position:132576:-1
position: 132576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:132674:-1
position: 132674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:131809-131907:-1:exon

position:131809:-1
position: 131809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:131907:-1
position: 131907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:131102-131204:-1:exon

position:131102:-1
position: 131102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:131204:-1
position: 131204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:130283-130383:-1:exon

position:130283:-1
position: 130283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:130383:-1
position: 130383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:129482-129623:-1:exon

position:129482:-1
position: 129482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:129623:-1
position: 129623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:128855-129015:-1:exon

position:128855:-1
position: 128855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:129015:-1
position: 129015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:128133-128251:-1:exon

position:128133:-1
position: 128133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:128251:-1
position: 128251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:127959-128047:-1:exon

position:127959:-1
position: 127959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:128047:-1
position: 128047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:126990-127181:-1:exon

position:126990:-1
position: 126990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:127181:-1
position: 127181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:126359-126436:-1:exon

position:126359:-1
position: 126359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:126436:-1
position: 126436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:125566-125732:-1:exon

position:125566:-1
position: 125566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:125732:-1
position: 125732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:124852-124973:-1:exon

position:124973:-1
position: 124973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115491568
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC115491568
product: KH-type splicing regulatory protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_041711816.1
SIO_010081: LOC115491568
subclass of: SO_0000673
so part of: LOC115491568
location: complement(join(124852..124973,125566..125732,126359..126436,126990..127193,127959..128047,128133..128251,128855..129015,129482..129623,130283..130383,131102..131204,131809..131907,132576..132674,133156..133327,134046..134103,134207..134278,134384..134433,134782..134821,135340..135378,135474..135582,137093..137290))
location: region:124852-137290:-1
so has part: feature:137093-137290:-1:exon
so has part: feature:135474-135582:-1:exon
so has part: feature:135340-135378:-1:exon
so has part: feature:134782-134821:-1:exon
so has part: feature:134384-134433:-1:exon
so has part: feature:134207-134278:-1:exon
so has part: feature:134046-134103:-1:exon
so has part: feature:133156-133327:-1:exon
so has part: feature:132576-132674:-1:exon
so has part: feature:131809-131907:-1:exon
so has part: feature:131102-131204:-1:exon
so has part: feature:130283-130383:-1:exon
so has part: feature:129482-129623:-1:exon
so has part: feature:128855-129015:-1:exon
so has part: feature:128133-128251:-1:exon
so has part: feature:127959-128047:-1:exon
so has part: feature:126990-127193:-1:exon
so has part: feature:126359-126436:-1:exon
so has part: feature:125566-125732:-1:exon
so has part: feature:124852-124973:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:137093-137290:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:135474-135582:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:135340-135378:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:134782-134821:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:134384-134433:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:134207-134278:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:134046-134103:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:133156-133327:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:132576-132674:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:131809-131907:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:131102-131204:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:130283-130383:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:129482-129623:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:128855-129015:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:128133-128251:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:127959-128047:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:126990-127193:-1:exon

position:127193:-1
position: 127193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:126359-126436:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:125566-125732:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:124852-124973:-1:exon

LOC115491568
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC115491568
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: far upstream element-binding protein 2 isoform X2
translation: MSEFGPAPPPPPQPGAAPAAPPSAGPAAGPGGGGGGGGGGGGGGGTGRKDAFADAVQRARQIAAKIGGDAAPPVPNNNAPPPDFGGFGGQKRQLEDGDQPESKKLAAQGEALPAPMGPMHPPARTTVTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGSPEAVQKAKALLDEIVARGRGGPPGPFPDAANGQNGGVQELMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRIIGEPYKVQQACEMVLDILRERDQSGFGDRTDYGARLGGGIDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPEKIAHIMGPPERCEHAARIINELLQSLRSGPPGPPGPGLPPGGRGRGRGQGSWGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFVIRGTPQQIDHAKQLIEEKIEGPLCPVGPGPGPGGPPGPAGPMGPFNPGPFNQGPPGAPPHPGGPPPHQYPPQGWGNAYPQWQPPAPHDPSKAPAPDPNAAWAAYYSHYYQQPPGPVPPQPPPAAPPVQGEPPQPPPAGQADYTKAWEEYYKKLGQQPQQPGAPPQQDYTKAWEEYYKKQAAQVASGGGPGAPPGPQPDYSAAWAEYYRQQAAYYGQSPGAAGPAGPPPAGQQGQQAQ
SIO_010081: LOC115491568
subclass of: SO_0000673
so part of: LOC115491568
location: complement(join(124965..124973,125566..125732,126359..126436,126990..127181,127959..128047,128133..128251,128855..129015,129482..129623,130283..130383,131102..131204,131809..131907,132576..132674,133156..133327,134046..134103,134207..134278,134384..134433,134782..134821,135340..135378,135474..135582,137093..137275))
location: region:124965-137275:-1
so has part: feature:137093-137275:-1:exon
so has part: feature:135474-135582:-1:exon
so has part: feature:135340-135378:-1:exon
so has part: feature:134782-134821:-1:exon
so has part: feature:134384-134433:-1:exon
so has part: feature:134207-134278:-1:exon
so has part: feature:134046-134103:-1:exon
so has part: feature:133156-133327:-1:exon
so has part: feature:132576-132674:-1:exon
so has part: feature:131809-131907:-1:exon
so has part: feature:131102-131204:-1:exon
so has part: feature:130283-130383:-1:exon
so has part: feature:129482-129623:-1:exon
so has part: feature:128855-129015:-1:exon
so has part: feature:128133-128251:-1:exon
so has part: feature:127959-128047:-1:exon
so has part: feature:126990-127181:-1:exon
so has part: feature:126359-126436:-1:exon
so has part: feature:125566-125732:-1:exon
so has part: feature:124965-124973:-1:exon

XP_041567751.1
type: Protein
SIO_000068: ncbiprotein

position:124965:-1
position: 124965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:137275:-1
position: 137275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:137093-137275:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:135474-135582:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:135340-135378:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:134782-134821:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:134384-134433:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:134207-134278:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:134046-134103:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:133156-133327:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:132576-132674:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:131809-131907:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:131102-131204:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:130283-130383:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:129482-129623:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:128855-129015:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:128133-128251:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:127959-128047:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:126990-127181:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:126359-126436:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:125566-125732:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:124965-124973:-1:exon

LOC115491568
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC115491568
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: far upstream element-binding protein 2 isoform X1
translation: MSEFGPAPPPPPQPGAAPAAPPSAGPAAGPGGGGGGGGGGGGGGGTGRKDAFADAVQRARQIAAKIGGDAAPPVPNNNAPPPDFGGFGGQKRQLEDGDQPESKKLAAQGEALPAPMGPMHPPARTTVTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGSPEAVQKAKALLDEIVARGRGGPPGPFPDAANGQNGGVQELMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRIIGEPYKVQQACEMVLDILRERDQSGFGDRTDYGARLGGGIDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPEKIAHIMGPPERCEHAARIINELLQSLRSGPPGPPGPGLPPGGRGRGRGQGSWGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFVIRGTPQQIDHAKQLIEEKIEGPLCPVGPGPGPGGPPGPAGPMGPFNPGPFNQGPPGAPPHPGGPPPHQYPPQGWGNAYPQWQPPAPHDPSPPPGKAPAPDPNAAWAAYYSHYYQQPPGPVPPQPPPAAPPVQGEPPQPPPAGQADYTKAWEEYYKKLGQQPQQPGAPPQQDYTKAWEEYYKKQAAQVASGGGPGAPPGPQPDYSAAWAEYYRQQAAYYGQSPGAAGPAGPPPAGQQGQQAQ
SIO_010081: LOC115491568
subclass of: SO_0000673
so part of: LOC115491568
location: complement(join(124965..124973,125566..125732,126359..126436,126990..127193,127959..128047,128133..128251,128855..129015,129482..129623,130283..130383,131102..131204,131809..131907,132576..132674,133156..133327,134046..134103,134207..134278,134384..134433,134782..134821,135340..135378,135474..135582,137093..137275))
location: region:124965-137275:-1
so has part: feature:137093-137275:-1:exon
so has part: feature:135474-135582:-1:exon
so has part: feature:135340-135378:-1:exon
so has part: feature:134782-134821:-1:exon
so has part: feature:134384-134433:-1:exon
so has part: feature:134207-134278:-1:exon
so has part: feature:134046-134103:-1:exon
so has part: feature:133156-133327:-1:exon
so has part: feature:132576-132674:-1:exon
so has part: feature:131809-131907:-1:exon
so has part: feature:131102-131204:-1:exon
so has part: feature:130283-130383:-1:exon
so has part: feature:129482-129623:-1:exon
so has part: feature:128855-129015:-1:exon
so has part: feature:128133-128251:-1:exon
so has part: feature:127959-128047:-1:exon
so has part: feature:126990-127193:-1:exon
so has part: feature:126359-126436:-1:exon
so has part: feature:125566-125732:-1:exon
so has part: feature:124965-124973:-1:exon

XP_041567750.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:137093-137275:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:135474-135582:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:135340-135378:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:134782-134821:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:134384-134433:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:134207-134278:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:134046-134103:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:133156-133327:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:132576-132674:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:131809-131907:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:131102-131204:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:130283-130383:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:129482-129623:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:128855-129015:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:128133-128251:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:127959-128047:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:126990-127193:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:126359-126436:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:125566-125732:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:124965-124973:-1:exon

LOC115491721
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC115491721
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(137997..146945)
location: region:137997-146945:-1
so has part: feature:137997-146945:-1:exon
subclass of: SO_0000010

115491721
type: Gene
SIO_000068: ncbigene

position:137997:-1
position: 137997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:146945:-1
position: 146945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:137997-146945:-1:exon

LOC115491721
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC115491721
product: low-density lipoprotein receptor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_041711815.1
SIO_010081: LOC115491721
subclass of: SO_0000673
so part of: LOC115491721
location: complement(join(137997..138542,138772..138914,139391..139465,139574..139645,140192..140329,140592..140742,140825..140964,141086..141204,141625..141843,142391..142556,143034..143156,143697..143819,144262..144387,144965..145336,146483..146945))
location: region:137997-146945:-1
so has part: feature:146483-146945:-1:exon
so has part: feature:144965-145336:-1:exon
so has part: feature:144262-144387:-1:exon
so has part: feature:143697-143819:-1:exon
so has part: feature:143034-143156:-1:exon
so has part: feature:142391-142556:-1:exon
so has part: feature:141625-141843:-1:exon
so has part: feature:141086-141204:-1:exon
so has part: feature:140825-140964:-1:exon
so has part: feature:140592-140742:-1:exon
so has part: feature:140192-140329:-1:exon
so has part: feature:139574-139645:-1:exon
so has part: feature:139391-139465:-1:exon
so has part: feature:138772-138914:-1:exon
so has part: feature:137997-138542:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:146483-146945:-1:exon

position:146483:-1
position: 146483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:144965-145336:-1:exon

position:144965:-1
position: 144965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:145336:-1
position: 145336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:144262-144387:-1:exon

position:144262:-1
position: 144262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:144387:-1
position: 144387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:143697-143819:-1:exon

position:143697:-1
position: 143697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:143819:-1
position: 143819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:143034-143156:-1:exon

position:143034:-1
position: 143034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:143156:-1
position: 143156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:142391-142556:-1:exon

position:142391:-1
position: 142391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:142556:-1
position: 142556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:141625-141843:-1:exon

position:141625:-1
position: 141625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:141843:-1
position: 141843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:141086-141204:-1:exon

position:141086:-1
position: 141086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:141204:-1
position: 141204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:140825-140964:-1:exon

position:140825:-1
position: 140825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:140964:-1
position: 140964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:140592-140742:-1:exon

position:140592:-1
position: 140592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:140742:-1
position: 140742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:140192-140329:-1:exon

position:140192:-1
position: 140192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:140329:-1
position: 140329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:139574-139645:-1:exon

position:139574:-1
position: 139574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:139645:-1
position: 139645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:139391-139465:-1:exon

position:139391:-1
position: 139391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:139465:-1
position: 139465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:138772-138914:-1:exon

position:138772:-1
position: 138772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:138914:-1
position: 138914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:137997-138542:-1:exon

position:138542:-1
position: 138542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115491721
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC115491721
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: low-density lipoprotein receptor
translation: MGPGSTGRGAGTAASGSGTTGRGSGTTGILLLLLGAAAAAATPTPSTAPPSCPPDHLSCGDGSCLSRHFVCDGDRDCGDGRDEAGCAPAPPCAPPAFRCRDGSCIAALWRCDGDRDCRDGEDEAEGLCGPPPPPRPCPPLQFSCGSGECLARRWRCDGTPDCRDSSDETDCAPPPPCPPGQLLCRDRRCIPAARACDGTPDCRDGDDEEACPDASPCPPPHRFRCRSGECIAIAQVCDGRRHCRDWSDEPLKECGVNECLEGSGGCSHGCRDLSVGYECVCPAGLGLEPNNRTCMGPPGPLLVAARHQLLQLGGAAPRLLQGALKHAGPMDADIHRGALFWGDPAQGRIYTAPLAGGPAVPVPLSVPGGAPAGLALDWTHSLLYWTEPGRGRVAVADPRDGRQRTVHRDPRTRPWALVVDPPSGFLYWSDWGSRPQITRGAQDGAPPEALVTEGVERPQGLALDPLSQRLFWADGRLQTVSSVGLDGRGRRTLLRDPPSLRQPLGLAVIQDWLLWTDPARGSLVASRLRGGSAPDPPRLLAQELLSPEAVLVLHPDRQPPGQNRCLGSGCSFLCLPSPPRGLGSAPFTCACPDGEHLAGDGRTCRTEPNGTAEPQSRNLSAEGNTSSATAGDLGRPGGAGGAGPLMTSLGVLLPLGLTVAVAAAARTLWRGWRRRSSHSISFSNAAFRKVPDPPGGAGPGDSQWPLTAEEDEP
SIO_010081: LOC115491721
subclass of: SO_0000673
so part of: LOC115491721
location: complement(join(138510..138542,138772..138914,139391..139465,139574..139645,140192..140329,140592..140742,140825..140964,141086..141204,141625..141843,142391..142556,143034..143156,143697..143819,144262..144387,144965..145336,146483..146624))
location: region:138510-146624:-1
so has part: feature:146483-146624:-1:exon
so has part: feature:144965-145336:-1:exon
so has part: feature:144262-144387:-1:exon
so has part: feature:143697-143819:-1:exon
so has part: feature:143034-143156:-1:exon
so has part: feature:142391-142556:-1:exon
so has part: feature:141625-141843:-1:exon
so has part: feature:141086-141204:-1:exon
so has part: feature:140825-140964:-1:exon
so has part: feature:140592-140742:-1:exon
so has part: feature:140192-140329:-1:exon
so has part: feature:139574-139645:-1:exon
so has part: feature:139391-139465:-1:exon
so has part: feature:138772-138914:-1:exon
so has part: feature:138510-138542:-1:exon

XP_041567749.1
type: Protein
SIO_000068: ncbiprotein

position:138510:-1
position: 138510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:146624:-1
position: 146624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:146483-146624:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:144965-145336:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:144262-144387:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:143697-143819:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:143034-143156:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:142391-142556:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:141625-141843:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:141086-141204:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:140825-140964:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:140592-140742:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:140192-140329:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:139574-139645:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:139391-139465:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:138772-138914:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:138510-138542:-1:exon

SMARCA4
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: SMARCA4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(147364..178808)
location: region:147364-178808:-1
so has part: feature:147364-178808:-1:exon
subclass of: SO_0000010

115491703
type: Gene
SIO_000068: ncbigene

position:147364:-1
position: 147364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:178808:-1
position: 178808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147364-178808:-1:exon

SMARCA4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: SMARCA4
product: SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_041711801.1
SIO_010081: SMARCA4
subclass of: SO_0000673
so part of: SMARCA4
location: complement(join(147364..148241,148623..148762,149308..149440,149936..150037,150519..150627,150985..151235,151858..152076,152735..152812,155985..156071,156294..156521,158315..158478,159878..160044,160270..160316,160849..160935,161432..161539,162277..162390,163090..163332,163698..163808,164243..164309,164395..164558,165397..165547,165930..166048,166358..166415,166502..166632,167143..167193,167659..167826,168789..168962,169638..169811,170638..170764,171457..171698,172162..172260,173206..173580,174737..174869,176233..176448,177067..177119,178654..178808))
location: region:147364-178808:-1
so has part: feature:178654-178808:-1:exon
so has part: feature:177067-177119:-1:exon
so has part: feature:176233-176448:-1:exon
so has part: feature:174737-174869:-1:exon
so has part: feature:173206-173580:-1:exon
so has part: feature:172162-172260:-1:exon
so has part: feature:171457-171698:-1:exon
so has part: feature:170638-170764:-1:exon
so has part: feature:169638-169811:-1:exon
so has part: feature:168789-168962:-1:exon
so has part: feature:167659-167826:-1:exon
so has part: feature:167143-167193:-1:exon
so has part: feature:166502-166632:-1:exon
so has part: feature:166358-166415:-1:exon
so has part: feature:165930-166048:-1:exon
so has part: feature:165397-165547:-1:exon
so has part: feature:164395-164558:-1:exon
so has part: feature:164243-164309:-1:exon
so has part: feature:163698-163808:-1:exon
so has part: feature:163090-163332:-1:exon
so has part: feature:162277-162390:-1:exon
so has part: feature:161432-161539:-1:exon
so has part: feature:160849-160935:-1:exon
so has part: feature:160270-160316:-1:exon
so has part: feature:159878-160044:-1:exon
so has part: feature:158315-158478:-1:exon
so has part: feature:156294-156521:-1:exon
so has part: feature:155985-156071:-1:exon
so has part: feature:152735-152812:-1:exon
so has part: feature:151858-152076:-1:exon
so has part: feature:150985-151235:-1:exon
so has part: feature:150519-150627:-1:exon
so has part: feature:149936-150037:-1:exon
so has part: feature:149308-149440:-1:exon
so has part: feature:148623-148762:-1:exon
so has part: feature:147364-148241:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:178654-178808:-1:exon

position:178654:-1
position: 178654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:177067-177119:-1:exon

position:177067:-1
position: 177067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:177119:-1
position: 177119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:176233-176448:-1:exon

position:176233:-1
position: 176233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:176448:-1
position: 176448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:174737-174869:-1:exon

position:174737:-1
position: 174737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:174869:-1
position: 174869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:173206-173580:-1:exon

position:173206:-1
position: 173206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:173580:-1
position: 173580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:172162-172260:-1:exon

position:172162:-1
position: 172162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:172260:-1
position: 172260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:171457-171698:-1:exon

position:171457:-1
position: 171457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:171698:-1
position: 171698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:170638-170764:-1:exon

position:170638:-1
position: 170638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:170764:-1
position: 170764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:169638-169811:-1:exon

position:169638:-1
position: 169638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:169811:-1
position: 169811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:168789-168962:-1:exon

position:168789:-1
position: 168789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:168962:-1
position: 168962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:167659-167826:-1:exon

position:167659:-1
position: 167659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:167826:-1
position: 167826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:167143-167193:-1:exon

position:167143:-1
position: 167143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:167193:-1
position: 167193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:166502-166632:-1:exon

position:166502:-1
position: 166502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:166632:-1
position: 166632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:166358-166415:-1:exon

position:166358:-1
position: 166358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:166415:-1
position: 166415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:165930-166048:-1:exon

position:165930:-1
position: 165930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:166048:-1
position: 166048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:165397-165547:-1:exon

position:165397:-1
position: 165397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:165547:-1
position: 165547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:164395-164558:-1:exon

position:164395:-1
position: 164395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:164558:-1
position: 164558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:164243-164309:-1:exon

position:164243:-1
position: 164243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:164309:-1
position: 164309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:163698-163808:-1:exon

position:163698:-1
position: 163698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:163808:-1
position: 163808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:163090-163332:-1:exon

position:163090:-1
position: 163090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:163332:-1
position: 163332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:162277-162390:-1:exon

position:162277:-1
position: 162277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:162390:-1
position: 162390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:161432-161539:-1:exon

position:161432:-1
position: 161432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:161539:-1
position: 161539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:160849-160935:-1:exon

position:160849:-1
position: 160849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:160935:-1
position: 160935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:160270-160316:-1:exon

position:160270:-1
position: 160270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:160316:-1
position: 160316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:159878-160044:-1:exon

position:159878:-1
position: 159878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:160044:-1
position: 160044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:158315-158478:-1:exon

position:158315:-1
position: 158315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:158478:-1
position: 158478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:156294-156521:-1:exon

position:156294:-1
position: 156294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:156521:-1
position: 156521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:155985-156071:-1:exon

position:155985:-1
position: 155985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:156071:-1
position: 156071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:152735-152812:-1:exon

position:152735:-1
position: 152735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:152812:-1
position: 152812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:151858-152076:-1:exon

position:151858:-1
position: 151858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:152076:-1
position: 152076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:150985-151235:-1:exon

position:150985:-1
position: 150985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:151235:-1
position: 151235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:150519-150627:-1:exon

position:150519:-1
position: 150519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:150627:-1
position: 150627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:149936-150037:-1:exon

position:149936:-1
position: 149936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:150037:-1
position: 150037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:149308-149440:-1:exon

position:149308:-1
position: 149308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:149440:-1
position: 149440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:148623-148762:-1:exon

position:148623:-1
position: 148623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:148762:-1
position: 148762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:147364-148241:-1:exon

position:148241:-1
position: 148241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SMARCA4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: SMARCA4
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: transcription activator BRG1
translation: MATPEPPLGGTPRPGPSPGPGPSPGSMLGPSPGPSPGSGHSGHSGHALPAPGYAPDSIHPLHKPLEAMHEKGMSEDPRYGQMKGMGMRPGGHAGMGPPPSPMDQHSQGYPSPLGGSEHASSPVPSNGPSGGSAGGSGAALDGSGSDSPALGRGPSPFNAAQLHQLRAQIMAYKLLARGQPLPEHLQVAVQGKRPLPGMQPQIPTLPPPAGAAQGPGPAPGAGPAPPGYSRPHGIGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPLSAAAPGGAPQKLLPPPPAGRPSPVPPAVPPASPGPPPPSPGQPAPPALPMHPKQNRITPIQKPRGLDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVSGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQAPAIGPDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEESGSEEEEEEEEEEQPQPAQPALPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGVSQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDESRQSAGSGSFPHAASSLCLGAESEEAPLKEEDEVPDDETVNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLMEEDELPSWILKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYSDSLTEKQWLKAIEEGTLEEIEEEVRQKKSSRKRKREPEGPAGTAPGGRARDKDEESRKQKKRGRPPAEKLSPNPPPLTRKMRKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKVEKEEESDGEESEEEEEGEEEGSESEARSVKVKIRLGRKEKVPERGKGRRRGGRGGRPKPLLSDDESEDEQEEDRSGSGTEDD
SIO_010081: SMARCA4
subclass of: SO_0000673
so part of: SMARCA4
location: complement(join(148209..148241,148623..148762,149308..149440,149936..150037,150519..150627,150985..151235,151858..152076,152735..152812,155985..156071,156294..156521,158315..158478,159878..160044,160270..160316,160849..160935,161432..161539,162277..162390,163090..163332,163698..163808,164243..164309,164395..164558,165397..165547,165930..166048,166358..166415,166502..166632,167143..167193,167659..167826,168789..168962,169638..169811,170638..170764,171457..171698,172162..172260,173206..173580,174737..174869,176233..176421))
location: region:148209-176421:-1
so has part: feature:176233-176421:-1:exon
so has part: feature:174737-174869:-1:exon
so has part: feature:173206-173580:-1:exon
so has part: feature:172162-172260:-1:exon
so has part: feature:171457-171698:-1:exon
so has part: feature:170638-170764:-1:exon
so has part: feature:169638-169811:-1:exon
so has part: feature:168789-168962:-1:exon
so has part: feature:167659-167826:-1:exon
so has part: feature:167143-167193:-1:exon
so has part: feature:166502-166632:-1:exon
so has part: feature:166358-166415:-1:exon
so has part: feature:165930-166048:-1:exon
so has part: feature:165397-165547:-1:exon
so has part: feature:164395-164558:-1:exon
so has part: feature:164243-164309:-1:exon
so has part: feature:163698-163808:-1:exon
so has part: feature:163090-163332:-1:exon
so has part: feature:162277-162390:-1:exon
so has part: feature:161432-161539:-1:exon
so has part: feature:160849-160935:-1:exon
so has part: feature:160270-160316:-1:exon
so has part: feature:159878-160044:-1:exon
so has part: feature:158315-158478:-1:exon
so has part: feature:156294-156521:-1:exon
so has part: feature:155985-156071:-1:exon
so has part: feature:152735-152812:-1:exon
so has part: feature:151858-152076:-1:exon
so has part: feature:150985-151235:-1:exon
so has part: feature:150519-150627:-1:exon
so has part: feature:149936-150037:-1:exon
so has part: feature:149308-149440:-1:exon
so has part: feature:148623-148762:-1:exon
so has part: feature:148209-148241:-1:exon

XP_041567735.1
type: Protein
SIO_000068: ncbiprotein

position:148209:-1
position: 148209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:176421:-1
position: 176421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:176233-176421:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:174737-174869:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:173206-173580:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:172162-172260:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:171457-171698:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:170638-170764:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:169638-169811:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:168789-168962:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:167659-167826:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:167143-167193:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:166502-166632:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:166358-166415:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:165930-166048:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:165397-165547:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:164395-164558:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:164243-164309:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:163698-163808:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:163090-163332:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:162277-162390:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:161432-161539:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:160849-160935:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:160270-160316:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:159878-160044:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:158315-158478:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:156294-156521:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:155985-156071:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:152735-152812:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:151858-152076:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:150985-151235:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:150519-150627:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:149936-150037:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:149308-149440:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:148623-148762:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:148209-148241:-1:exon

FBXW9
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: FBXW9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(179952..184754)
location: region:179952-184754:-1
so has part: feature:179952-184754:-1:exon
subclass of: SO_0000010

115491763
type: Gene
SIO_000068: ncbigene

position:179952:-1
position: 179952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:184754:-1
position: 184754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:179952-184754:-1:exon

FBXW9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: FBXW9
product: F-box and WD repeat domain containing 9, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 60 samples with support for all annotated introns
transcript id: XM_041711828.1
SIO_010081: FBXW9
subclass of: SO_0000673
so part of: FBXW9
location: complement(join(179952..180173,180543..180608,181429..181541,181821..181934,182016..182164,182426..182517,182596..182708,183023..183154,183425..183576,184320..184754))
location: region:179952-184754:-1
so has part: feature:184320-184754:-1:exon
so has part: feature:183425-183576:-1:exon
so has part: feature:183023-183154:-1:exon
so has part: feature:182596-182708:-1:exon
so has part: feature:182426-182517:-1:exon
so has part: feature:182016-182164:-1:exon
so has part: feature:181821-181934:-1:exon
so has part: feature:181429-181541:-1:exon
so has part: feature:180543-180608:-1:exon
so has part: feature:179952-180173:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:184320-184754:-1:exon

position:184320:-1
position: 184320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:183425-183576:-1:exon

position:183425:-1
position: 183425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:183576:-1
position: 183576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:183023-183154:-1:exon

position:183023:-1
position: 183023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:183154:-1
position: 183154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:182596-182708:-1:exon

position:182596:-1
position: 182596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:182708:-1
position: 182708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:182426-182517:-1:exon

position:182426:-1
position: 182426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:182517:-1
position: 182517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:182016-182164:-1:exon

position:182016:-1
position: 182016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:182164:-1
position: 182164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:181821-181934:-1:exon

position:181821:-1
position: 181821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:181934:-1
position: 181934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:181429-181541:-1:exon

position:181429:-1
position: 181429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:181541:-1
position: 181541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:180543-180608:-1:exon

position:180543:-1
position: 180543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:180608:-1
position: 180608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:179952-180173:-1:exon

position:180173:-1
position: 180173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FBXW9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: FBXW9
product: F-box and WD repeat domain containing 9, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 76 samples with support for all annotated introns
transcript id: XM_041711829.1
SIO_010081: FBXW9
subclass of: SO_0000673
so part of: FBXW9
location: complement(join(179952..180173,180543..180608,181452..181541,181821..181934,182016..182076,182426..182517,182596..182708,183023..183154,183425..183576,184320..184753))
location: region:179952-184753:-1
so has part: feature:184320-184753:-1:exon
so has part: feature:183425-183576:-1:exon
so has part: feature:183023-183154:-1:exon
so has part: feature:182596-182708:-1:exon
so has part: feature:182426-182517:-1:exon
so has part: feature:182016-182076:-1:exon
so has part: feature:181821-181934:-1:exon
so has part: feature:181452-181541:-1:exon
so has part: feature:180543-180608:-1:exon
so has part: feature:179952-180173:-1:exon

position:184753:-1
position: 184753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:184320-184753:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:183425-183576:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:183023-183154:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:182596-182708:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:182426-182517:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:182016-182076:-1:exon

position:182076:-1
position: 182076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:181821-181934:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:181452-181541:-1:exon

position:181452:-1
position: 181452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:180543-180608:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:179952-180173:-1:exon

FBXW9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: FBXW9
product: F-box and WD repeat domain containing 9, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 90 samples with support for all annotated introns
transcript id: XM_041711827.1
SIO_010081: FBXW9
subclass of: SO_0000673
so part of: FBXW9
location: complement(join(179952..180173,180543..180608,181452..181541,181821..181934,182016..182164,182426..182517,182596..182708,183023..183154,183425..183576,184320..184750))
location: region:179952-184750:-1
so has part: feature:184320-184750:-1:exon
so has part: feature:183425-183576:-1:exon
so has part: feature:183023-183154:-1:exon
so has part: feature:182596-182708:-1:exon
so has part: feature:182426-182517:-1:exon
so has part: feature:182016-182164:-1:exon
so has part: feature:181821-181934:-1:exon
so has part: feature:181452-181541:-1:exon
so has part: feature:180543-180608:-1:exon
so has part: feature:179952-180173:-1:exon

position:184750:-1
position: 184750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:184320-184750:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:183425-183576:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:183023-183154:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:182596-182708:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:182426-182517:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:182016-182164:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:181821-181934:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:181452-181541:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:180543-180608:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:179952-180173:-1:exon

FBXW9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: FBXW9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box/WD repeat-containing protein 9 isoform X1
translation: MDGPPAPPAAAPVPVSVPVPVSVPVPVPVPVPVGLLALPPELLLRICGFLRARDVRRLLPRVCRALRALARDAALWRLRLRQRARRPLPVLPDPGFDWAAACEELEELEERWGAGGGAGAAPMEHFSLDSGHFASVDAVLLLQGGSLCVSGGRDRNVNLWDLRELGRGPPGRALVRALGSGRGGTHKGWVWCLAARDTRVCSGSWDSTVKLWDLGAEGQQFGEIREKAAVLCLSYRPDALVTGTYDKTVAVYDPRAGPLQVSSYKPHGSAVLALAADERLIVSGSEDRTLVVFDRRGGAVLQRLQLDNYLLAMSYRGSQLWAGDNQGRVYLFGSASGGFQPARYFDVGHRLQITGLWHSLGSLFTTSTDRTLRVHVPTDPPRTLCSWTHEDVLNGISVDGDVVAAASGGLSVEVWRLRT
SIO_010081: FBXW9
subclass of: SO_0000673
so part of: FBXW9
location: complement(join(180099..180173,180543..180608,181452..181541,181821..181934,182016..182164,182426..182517,182596..182708,183023..183154,183425..183576,184320..184596))
location: region:180099-184596:-1
so has part: feature:184320-184596:-1:exon
so has part: feature:183425-183576:-1:exon
so has part: feature:183023-183154:-1:exon
so has part: feature:182596-182708:-1:exon
so has part: feature:182426-182517:-1:exon
so has part: feature:182016-182164:-1:exon
so has part: feature:181821-181934:-1:exon
so has part: feature:181452-181541:-1:exon
so has part: feature:180543-180608:-1:exon
so has part: feature:180099-180173:-1:exon

XP_041567761.1
type: Protein
SIO_000068: ncbiprotein

position:180099:-1
position: 180099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:184596:-1
position: 184596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:184320-184596:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:183425-183576:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:183023-183154:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:182596-182708:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:182426-182517:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:182016-182164:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:181821-181934:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:181452-181541:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:180543-180608:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:180099-180173:-1:exon

FBXW9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: FBXW9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box/WD repeat-containing protein 9 isoform X3
translation: MDGPPAPPAAAPVPVSVPVPVSVPVPVPVPVPVGLLALPPELLLRICGFLRARDVRRLLPRVCRALRALARDAALWRLRLRQRARRPLPVLPDPGFDWAAACEELEELEERWGAGGGAGAAPMEHFSLDSGHFASVDAVLLLQGGSLCVSGGRDRNVNLWDLRELGRGPPGRALVRALGSGRGGTHKGWVWCLAARDTRVCSGSWDSTVKLWDLGAEGQQFGEIREKAAVLCLSYRPDALVTGTYDKTVAVYDPRARTGPSWCSTAAAAPSCSGCSWTITCWPCPTAARSSGPATTRAACTCSAAPAAASSPPGTSTWGTGCRSRGCGTRWDRSSPPPPTGRCGSTSPPTPRAPSAPGPTRTS
SIO_010081: FBXW9
subclass of: SO_0000673
so part of: FBXW9
location: complement(join(180548..180608,181452..181541,181821..181934,182016..182076,182426..182517,182596..182708,183023..183154,183425..183576,184320..184596))
location: region:180548-184596:-1
so has part: feature:184320-184596:-1:exon
so has part: feature:183425-183576:-1:exon
so has part: feature:183023-183154:-1:exon
so has part: feature:182596-182708:-1:exon
so has part: feature:182426-182517:-1:exon
so has part: feature:182016-182076:-1:exon
so has part: feature:181821-181934:-1:exon
so has part: feature:181452-181541:-1:exon
so has part: feature:180548-180608:-1:exon

XP_041567763.1
type: Protein
SIO_000068: ncbiprotein

position:180548:-1
position: 180548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:184320-184596:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:183425-183576:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:183023-183154:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:182596-182708:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:182426-182517:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:182016-182076:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:181821-181934:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:181452-181541:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:180548-180608:-1:exon

FBXW9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: FBXW9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box/WD repeat-containing protein 9 isoform X2
translation: MDGPPAPPAAAPVPVSVPVPVSVPVPVPVPVPVGLLALPPELLLRICGFLRARDVRRLLPRVCRALRALARDAALWRLRLRQRARRPLPVLPDPGFDWAAACEELEELEERWGAGGGAGAAPMEHFSLDSGHFASVDAVLLLQGGSLCVSGGRDRNVNLWDLRELGRGPPGRALVRALGSGRGGTHKGWVWCLAARDTRVCSGSWDSTVKLWDLGAEGQQFGEIREKAAVLCLSYRPDALVTGTYDKTVAVYDPRAGPLQVSSYKPHGSAVLALAADERLIVSGSEDRTLVVFDRRGGAVLQRLQLDNYLLAMSYRGSQLWAGDNQGRVYLFGSASGGFQPARYFDVGHRLQITGLWHSLGSLFTTSTDRTLRVGYRGEHGSTSPPTPRAPSAPGPTRTS
SIO_010081: FBXW9
subclass of: SO_0000673
so part of: FBXW9
location: complement(join(180548..180608,181429..181541,181821..181934,182016..182164,182426..182517,182596..182708,183023..183154,183425..183576,184320..184596))
location: region:180548-184596:-1
so has part: feature:184320-184596:-1:exon
so has part: feature:183425-183576:-1:exon
so has part: feature:183023-183154:-1:exon
so has part: feature:182596-182708:-1:exon
so has part: feature:182426-182517:-1:exon
so has part: feature:182016-182164:-1:exon
so has part: feature:181821-181934:-1:exon
so has part: feature:181429-181541:-1:exon
so has part: feature:180548-180608:-1:exon

XP_041567762.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:184320-184596:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:183425-183576:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:183023-183154:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:182596-182708:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:182426-182517:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:182016-182164:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:181821-181934:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:181429-181541:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:180548-180608:-1:exon

TNPO2
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: TNPO2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(186164..198536)
location: region:186164-198536:-1
so has part: feature:186164-198536:-1:exon
subclass of: SO_0000010

115491709
type: Gene
SIO_000068: ncbigene

position:186164:-1
position: 186164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:198536:-1
position: 198536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:186164-198536:-1:exon

TNPO2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: TNPO2
product: transportin 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 99 samples with support for all annotated introns
transcript id: XM_032745585.2
SIO_010081: TNPO2
subclass of: SO_0000673
so part of: TNPO2
location: complement(join(186164..186326,186421..186495,186940..187039,187257..187332,188334..188429,189025..189123,189213..189300,189365..189523,190128..190235,190335..190421,191213..191384,192133..192358,192894..193046,193825..193990,194405..194465,195184..195302,195533..195655,195977..196058,196308..196441,196531..196637,197322..197471,197587..197662,198381..198536))
location: region:186164-198536:-1
so has part: feature:198381-198536:-1:exon
so has part: feature:197587-197662:-1:exon
so has part: feature:197322-197471:-1:exon
so has part: feature:196531-196637:-1:exon
so has part: feature:196308-196441:-1:exon
so has part: feature:195977-196058:-1:exon
so has part: feature:195533-195655:-1:exon
so has part: feature:195184-195302:-1:exon
so has part: feature:194405-194465:-1:exon
so has part: feature:193825-193990:-1:exon
so has part: feature:192894-193046:-1:exon
so has part: feature:192133-192358:-1:exon
so has part: feature:191213-191384:-1:exon
so has part: feature:190335-190421:-1:exon
so has part: feature:190128-190235:-1:exon
so has part: feature:189365-189523:-1:exon
so has part: feature:189213-189300:-1:exon
so has part: feature:189025-189123:-1:exon
so has part: feature:188334-188429:-1:exon
so has part: feature:187257-187332:-1:exon
so has part: feature:186940-187039:-1:exon
so has part: feature:186421-186495:-1:exon
so has part: feature:186164-186326:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:198381-198536:-1:exon

position:198381:-1
position: 198381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:197587-197662:-1:exon

position:197587:-1
position: 197587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:197662:-1
position: 197662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:197322-197471:-1:exon

position:197322:-1
position: 197322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:197471:-1
position: 197471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:196531-196637:-1:exon

position:196531:-1
position: 196531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:196637:-1
position: 196637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:196308-196441:-1:exon

position:196308:-1
position: 196308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:196441:-1
position: 196441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:195977-196058:-1:exon

position:195977:-1
position: 195977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:196058:-1
position: 196058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:195533-195655:-1:exon

position:195533:-1
position: 195533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:195655:-1
position: 195655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:195184-195302:-1:exon

position:195184:-1
position: 195184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:195302:-1
position: 195302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:194405-194465:-1:exon

position:194405:-1
position: 194405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:194465:-1
position: 194465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:193825-193990:-1:exon

position:193825:-1
position: 193825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:193990:-1
position: 193990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:192894-193046:-1:exon

position:192894:-1
position: 192894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:193046:-1
position: 193046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:192133-192358:-1:exon

position:192133:-1
position: 192133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:192358:-1
position: 192358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:191213-191384:-1:exon

position:191213:-1
position: 191213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:191384:-1
position: 191384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:190335-190421:-1:exon

position:190335:-1
position: 190335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:190421:-1
position: 190421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:190128-190235:-1:exon

position:190128:-1
position: 190128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:190235:-1
position: 190235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:189365-189523:-1:exon

position:189365:-1
position: 189365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:189523:-1
position: 189523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:189213-189300:-1:exon

position:189213:-1
position: 189213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:189300:-1
position: 189300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:189025-189123:-1:exon

position:189025:-1
position: 189025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:189123:-1
position: 189123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:188334-188429:-1:exon

position:188334:-1
position: 188334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:188429:-1
position: 188429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:187257-187332:-1:exon

position:187257:-1
position: 187257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:187332:-1
position: 187332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:186940-187039:-1:exon

position:186940:-1
position: 186940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:187039:-1
position: 187039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:186421-186495:-1:exon

position:186421:-1
position: 186421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:186495:-1
position: 186495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:186164-186326:-1:exon

position:186326:-1
position: 186326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TNPO2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: TNPO2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transportin-2
translation: MEWQPDEQGLQQVLQLLKDSQSPNTATQRVVQDKLKQLNQFPDFNNYLIFVLTRLKSEDEPTRSLSGLILKNNVKAHFQSFPPPVADFIKRECLNHLGDNSSLIRATIGILITTIASKGELQMWPELLPQLCNLLNSEDYNTCEGAFGALQKICEDSSELLDSDALNRPLNVMIPKFLQFFKHCSPKIRSHAIACVNQFIMDRAQALMENIDTFIEHLFALAADEEPEVRRNVCRALVMLLEVRIDRLLPHMHSIIQYMLQRTQDGDENVALEACEFWLTLAEQPVCKEVLTAHLVQLIPILVHGMRYSEIDIILLKGDVEEDEAVPDSEQDIKPRFHKSRTVTLAHEEPHDGDEDDGDEDDDDDALSDWNLRKCSAAALDVLANVFREELLPHLLPLLKELLFHLEWVVKESGILVLGAIAEGCMQGMVPYLPELVPHLIRCLADRKALVRSIACWTLSRYAHWVVAQPPELYLKPLMTELLQRVLDGNKRVQEAACSAFATLEEEACTELVPYLSFILDTLVFAFGKYQHKNLLILYDAIGTLADSVGHHLNQPEYIQKLMPPLIQKWNELKDEDKDLFPLLECLSSVATALQSGFLPYCEPVYQRCVTLVQKTLAQAMMYNQHPEQYEAPDKDFMIVALDLLSGLAEGLGGHVEQLVARSNVMTLLFQCMQDTMPEVRQSSFALLGDLTKACFVHVKPCIAEFMPILGTNLNPEFISVCNNATWAIGEICMQMGAEMQPYVPLVLNNLVEIINRPNTPKTLLENTAITIGRLGLVCPQEVAPTLPQFIRPWCTSLRNIRDNEEKDSAFRGVCLMIGANPGGVAQDFIFFCDAVASWLSPKEDLREMFYKILHGFRAQVGEENWRRFSEQLPPLLKERLAAFYGV
SIO_010081: TNPO2
subclass of: SO_0000673
so part of: TNPO2
location: complement(join(186219..186326,186421..186495,186940..187039,187257..187332,188334..188429,189025..189123,189213..189300,189365..189523,190128..190235,190335..190421,191213..191384,192133..192358,192894..193046,193825..193990,194405..194465,195184..195302,195533..195655,195977..196058,196308..196441,196531..196637,197322..197471,197587..197662,198381..198479))
location: region:186219-198479:-1
so has part: feature:198381-198479:-1:exon
so has part: feature:197587-197662:-1:exon
so has part: feature:197322-197471:-1:exon
so has part: feature:196531-196637:-1:exon
so has part: feature:196308-196441:-1:exon
so has part: feature:195977-196058:-1:exon
so has part: feature:195533-195655:-1:exon
so has part: feature:195184-195302:-1:exon
so has part: feature:194405-194465:-1:exon
so has part: feature:193825-193990:-1:exon
so has part: feature:192894-193046:-1:exon
so has part: feature:192133-192358:-1:exon
so has part: feature:191213-191384:-1:exon
so has part: feature:190335-190421:-1:exon
so has part: feature:190128-190235:-1:exon
so has part: feature:189365-189523:-1:exon
so has part: feature:189213-189300:-1:exon
so has part: feature:189025-189123:-1:exon
so has part: feature:188334-188429:-1:exon
so has part: feature:187257-187332:-1:exon
so has part: feature:186940-187039:-1:exon
so has part: feature:186421-186495:-1:exon
so has part: feature:186219-186326:-1:exon

XP_032601476.2
type: Protein
SIO_000068: ncbiprotein

position:186219:-1
position: 186219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:198479:-1
position: 198479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:198381-198479:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:197587-197662:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:197322-197471:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:196531-196637:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:196308-196441:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:195977-196058:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:195533-195655:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:195184-195302:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:194405-194465:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:193825-193990:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:192894-193046:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:192133-192358:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:191213-191384:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:190335-190421:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:190128-190235:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:189365-189523:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:189213-189300:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:189025-189123:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:188334-188429:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:187257-187332:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:186940-187039:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:186421-186495:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:186219-186326:-1:exon

TNPO2
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 59729
gene: TNPO2
product: transportin 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 77 samples with support for all annotated introns
transcript id: XR_005978364.1
SIO_010081: TNPO2
so part of: TNPO2
location: complement(join(194405..194465,195184..195321,195533..195655,195977..196058,196308..196441,196531..196637,197322..197471,197587..197662,198381..198536))
location: region:194405-198536:-1
so has part: feature:198381-198536:-1:exon
so has part: feature:197587-197662:-1:exon
so has part: feature:197322-197471:-1:exon
so has part: feature:196531-196637:-1:exon
so has part: feature:196308-196441:-1:exon
so has part: feature:195977-196058:-1:exon
so has part: feature:195533-195655:-1:exon
so has part: feature:195184-195321:-1:exon
so has part: feature:194405-194465:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:198381-198536:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:197587-197662:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:197322-197471:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:196531-196637:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:196308-196441:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:195977-196058:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:195533-195655:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:195184-195321:-1:exon

position:195321:-1
position: 195321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:194405-194465:-1:exon

TRIR
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: TRIR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(200154..202878)
location: region:200154-202878:-1
so has part: feature:200154-202878:-1:exon
subclass of: SO_0000010

121468339
type: Gene
SIO_000068: ncbigene

position:200154:-1
position: 200154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:202878:-1
position: 202878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:200154-202878:-1:exon

TRIR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: TRIR
product: telomerase RNA component interacting RNase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 133 samples with support for all annotated introns
transcript id: XM_041711841.1
SIO_010081: TRIR
subclass of: SO_0000673
so part of: TRIR
location: complement(join(200154..201385,202255..202332,202618..202878))
location: region:200154-202878:-1
so has part: feature:202618-202878:-1:exon
so has part: feature:202255-202332:-1:exon
so has part: feature:200154-201385:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:202618-202878:-1:exon

position:202618:-1
position: 202618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:202255-202332:-1:exon

position:202255:-1
position: 202255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:202332:-1
position: 202332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:200154-201385:-1:exon

position:201385:-1
position: 201385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TRIR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: TRIR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: telomerase RNA component interacting RNase
translation: MAARGEDREAPEAPSPPPPGPGGGVNVFANDGSFLELFKRKMEAEEQQREREAAAAAAAEASGGGGGGTGLGLQRDGVKRSGGPLSFVGRRRGGNKLALKTGVVAKKQKTDEEVLTSKGDAWAKYLAEVQKYKAHQCSDDDKTRPLVK
SIO_010081: TRIR
subclass of: SO_0000673
so part of: TRIR
location: complement(join(201278..201385,202255..202332,202618..202878))
location: region:201278-202878:-1
so has part: feature:202618-202878:-1:exon
so has part: feature:202255-202332:-1:exon
so has part: feature:201278-201385:-1:exon

XP_041567775.1
type: Protein
SIO_000068: ncbiprotein

position:201278:-1
position: 201278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:202618-202878:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:202255-202332:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:201278-201385:-1:exon

GET3
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: GET3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 203006..208142
location: region:203006-208142:1
so has part: feature:203006-208142:1:exon
subclass of: SO_0000010

121468335
type: Gene
SIO_000068: ncbigene

position:203006:1
position: 203006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:208142:1
position: 208142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:203006-208142:1:exon

GET3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: GET3
product: guided entry of tail-anchored proteins factor 3, ATPase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 ESTs, 4 long SRA reads, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 115 samples with support for all annotated introns
transcript id: XM_041711836.1
SIO_010081: GET3
subclass of: SO_0000673
so part of: GET3
location: join(203006..203266,203671..203818,204310..204458,205230..205380,205825..205932,206578..206775,207750..208142)
location: region:203006-208142:1
so has part: feature:203006-203266:1:exon
so has part: feature:203671-203818:1:exon
so has part: feature:204310-204458:1:exon
so has part: feature:205230-205380:1:exon
so has part: feature:205825-205932:1:exon
so has part: feature:206578-206775:1:exon
so has part: feature:207750-208142:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:203006-203266:1:exon

position:203266:1
position: 203266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:203671-203818:1:exon

position:203671:1
position: 203671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:203818:1
position: 203818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:204310-204458:1:exon

position:204310:1
position: 204310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:204458:1
position: 204458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:205230-205380:1:exon

position:205230:1
position: 205230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:205380:1
position: 205380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:205825-205932:1:exon

position:205825:1
position: 205825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:205932:1
position: 205932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:206578-206775:1:exon

position:206578:1
position: 206578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:206775:1
position: 206775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:207750-208142:1:exon

position:207750:1
position: 207750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GET3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: GET3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATPase GET3
translation: MAAAGGWAAEGPEEFEDAPDVEPLEPTLANIIEQRSLKWIFVGGKGGVGKTTCSCSLAVQLARVRESVLIISTDPAHNISDAFDQKFSKVPTKVTGYDNLFAMEIDPSLGVAELPDEFFEEDNVLSMGKKMMQEAMSAFPGIDEAMSYAEVMRLVKGMNFSVVVFDTAPTGHTLRLLNFPTIVERGLGRLMQIKNQISPFISQMCSMLGLGDMNADQLASKLEETLPVIRSVSEQFKDPEQTTFICVCIAEFLSLYETERLIQELAKCRIDTHNIVVNQLVFPEPARPCRMCEARHKIQAKYLDQMEDLYEDFHIVKLPLLPHEVRGGDKVNTFSSLLLDPYQPPSPK
SIO_010081: GET3
subclass of: SO_0000673
so part of: GET3
location: join(203106..203266,203671..203818,204310..204458,205230..205380,205825..205932,206578..206775,207750..207881)
location: region:203106-207881:1
so has part: feature:203106-203266:1:exon
so has part: feature:203671-203818:1:exon
so has part: feature:204310-204458:1:exon
so has part: feature:205230-205380:1:exon
so has part: feature:205825-205932:1:exon
so has part: feature:206578-206775:1:exon
so has part: feature:207750-207881:1:exon

XP_041567770.1
type: Protein
SIO_000068: ncbiprotein

position:203106:1
position: 203106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:207881:1
position: 207881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:203106-203266:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:203671-203818:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:204310-204458:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:205230-205380:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:205825-205932:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:206578-206775:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:207750-207881:1:exon

TIMM29
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: TIMM29
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(208560..211102)
location: region:208560-211102:-1
so has part: feature:208560-211102:-1:exon
subclass of: SO_0000010

121468337
type: Gene
SIO_000068: ncbigene

position:208560:-1
position: 208560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:211102:-1
position: 211102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:208560-211102:-1:exon

TIMM29
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: TIMM29
product: translocase of inner mitochondrial membrane 29, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_041711839.1
SIO_010081: TIMM29
subclass of: SO_0000673
so part of: TIMM29
location: complement(join(208560..209081,209136..209777,210733..211102))
location: region:208560-211102:-1
so has part: feature:210733-211102:-1:exon
so has part: feature:209136-209777:-1:exon
so has part: feature:208560-209081:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:210733-211102:-1:exon

position:210733:-1
position: 210733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:209136-209777:-1:exon

position:209136:-1
position: 209136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:209777:-1
position: 209777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:208560-209081:-1:exon

position:209081:-1
position: 209081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TIMM29
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: TIMM29
product: translocase of inner mitochondrial membrane 29, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 149 samples with support for all annotated introns
transcript id: XM_041711838.1
SIO_010081: TIMM29
subclass of: SO_0000673
so part of: TIMM29
location: complement(join(209104..209777,210733..211098))
location: region:209104-211098:-1
so has part: feature:210733-211098:-1:exon
so has part: feature:209104-209777:-1:exon

position:209104:-1
position: 209104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:211098:-1
position: 211098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:210733-211098:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:209104-209777:-1:exon

TIMM29
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: TIMM29
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial import inner membrane translocase subunit Tim29
translation: MAAAAAAAGGAGRGLWARLGDTRLALWFRALLRDYSSSLRDAAGAARRRPLLSAAAVAGLAVTAGLARSVPDGGSLESAAVAAAAALSPIPPGSRSPRAERRVLRLLRLRERGRLRVRSLGLLSVAAAEPDGTDAALYRARCPHLRPRPWERGALLDVGFAGRWWLLEAALRDPDVNEEEFGHLPGPLRRLRPAELRSERNERLHRERLRAVVLSEADIGGEEPLEIRGSA
SIO_010081: TIMM29
subclass of: SO_0000673
so part of: TIMM29
location: complement(join(209155..209777,210733..210805))
location: region:209155-210805:-1
so has part: feature:210733-210805:-1:exon
so has part: feature:209155-209777:-1:exon

XP_041567772.1
type: Protein
SIO_000068: ncbiprotein

position:209155:-1
position: 209155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:210805:-1
position: 210805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:210733-210805:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:209155-209777:-1:exon

TIMM29
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: TIMM29
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial import inner membrane translocase subunit Tim29
translation: MAAAAAAAGGAGRGLWARLGDTRLALWFRALLRDYSSSLRDAAGAARRRPLLSAAAVAGLAVTAGLARSVPDGGSLESAAVAAAAALSPIPPGSRSPRAERRVLRLLRLRERGRLRVRSLGLLSVAAAEPDGTDAALYRARCPHLRPRPWERGALLDVGFAGRWWLLEAALRDPDVNEEEFGHLPGPLRRLRPAELRSERNERLHRERLRAVVLSEADIGGEEPLEIRGSA
SIO_010081: TIMM29
subclass of: SO_0000673
so part of: TIMM29
location: complement(join(209155..209777,210733..210805))
location: region:209155-210805:-1
so has part: feature:210733-210805:-1:exon
so has part: feature:209155-209777:-1:exon

XP_041567773.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:210733-210805:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:209155-209777:-1:exon

KEAP1
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: KEAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(212883..220089)
location: region:212883-220089:-1
so has part: feature:212883-220089:-1:exon
subclass of: SO_0000010

115491723
type: Gene
SIO_000068: ncbigene

position:212883:-1
position: 212883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:220089:-1
position: 220089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:212883-220089:-1:exon

KEAP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: KEAP1
product: kelch like ECH associated protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 43 samples with support for all annotated introns
transcript id: XM_041711813.1
SIO_010081: KEAP1
subclass of: SO_0000673
so part of: KEAP1
location: complement(join(212883..213542,214154..214330,215020..215225,215837..216519,217266..217415,218448..218922,219866..220088))
location: region:212883-220088:-1
so has part: feature:219866-220088:-1:exon
so has part: feature:218448-218922:-1:exon
so has part: feature:217266-217415:-1:exon
so has part: feature:215837-216519:-1:exon
so has part: feature:215020-215225:-1:exon
so has part: feature:214154-214330:-1:exon
so has part: feature:212883-213542:-1:exon

position:220088:-1
position: 220088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:219866-220088:-1:exon

position:219866:-1
position: 219866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:218448-218922:-1:exon

position:218448:-1
position: 218448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:218922:-1
position: 218922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:217266-217415:-1:exon

position:217266:-1
position: 217266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:217415:-1
position: 217415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:215837-216519:-1:exon

position:215837:-1
position: 215837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:216519:-1
position: 216519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:215020-215225:-1:exon

position:215020:-1
position: 215020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:215225:-1
position: 215225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:214154-214330:-1:exon

position:214154:-1
position: 214154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:214330:-1
position: 214330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:212883-213542:-1:exon

position:213542:-1
position: 213542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KEAP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: KEAP1
product: kelch like ECH associated protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 86 samples with support for all annotated introns
transcript id: XM_032745622.2
SIO_010081: KEAP1
subclass of: SO_0000673
so part of: KEAP1
location: complement(join(212883..213542,214154..214330,215020..215225,215837..216519,217266..217415,218448..218969))
location: region:212883-218969:-1
so has part: feature:218448-218969:-1:exon
so has part: feature:217266-217415:-1:exon
so has part: feature:215837-216519:-1:exon
so has part: feature:215020-215225:-1:exon
so has part: feature:214154-214330:-1:exon
so has part: feature:212883-213542:-1:exon

position:218969:-1
position: 218969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:218448-218969:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:217266-217415:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:215837-216519:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:215020-215225:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:214154-214330:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:212883-213542:-1:exon

KEAP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: KEAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kelch-like ECH-associated protein 1 isoform X1
translation: MSGPSPPLRDCGAEELLPPPSSSSSSSSSSSSCCRYPRPEHPAAALAAMNRLRLEGQLCDVTLRLRPHTELRAHRVVLAAASPVFRAMFTGGLRERGQAEVPIEGVQPRAMERLVEFAYTAAVAVGERCVLPLLHGALMYQVDAVVSACCAFLGGQLHPSNAIGIAALAERLGCLELQQKAQQYIYMNFAEVSKQEEFLSLSHCQLASLLSRDELNVRCESEVFQACVAWVQQERAARAPLLPLLLRAVRCHALTPRFLRAQLRRRRELGRDALRYLGRVFRELALHRPCGDRPPGRSPRARQLIYAAGGYLRRSLGTLEAFDPERGSWLRLAALEPPRSGLGGCAVGGLFYAVGGRNNSPQGNTDSAAVDCYNPVSGRWAPCAPMSVPRNRIGVGVIDGLIYAVGGSHGCTHHCSVERYEPERDEWAQVAPMGTRRIGLGVAVLHRLLYAVGGFDGSARLRSAERYHPERDRWQNIAPMNSVRSGAGVCALGNCLYAMGGYDGTQQLRSAERFRADTGTWSFVAPMGHRRSALGVAAFGGRIYVLGGYDGRSFLQSVECYDPAADAWTELAPMPAGRSGLGVAVTVEPCHPRDPRDPPPGPPPTRGPPPRRLLLTPAPPRGLGGWGGAGFPKFRIFPFPTPPPNPSPAGGGLRGAVGGSCQRDPSPKWHRGVPCPARGRFWGRFWRFTDRIKEMTDLWFNGEGVGGLGRGHGASGSVGSTGGLRGLHSVGTSPHR
SIO_010081: KEAP1
subclass of: SO_0000673
so part of: KEAP1
location: complement(join(212971..213542,214154..214330,215020..215225,215837..216519,217266..217415,218448..218870))
location: region:212971-218870:-1
so has part: feature:218448-218870:-1:exon
so has part: feature:217266-217415:-1:exon
so has part: feature:215837-216519:-1:exon
so has part: feature:215020-215225:-1:exon
so has part: feature:214154-214330:-1:exon
so has part: feature:212971-213542:-1:exon

XP_041567747.1
type: Protein
SIO_000068: ncbiprotein

position:212971:-1
position: 212971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:218870:-1
position: 218870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:218448-218870:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:217266-217415:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:215837-216519:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:215020-215225:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:214154-214330:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:212971-213542:-1:exon

KEAP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: KEAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kelch-like ECH-associated protein 1 isoform X1
translation: MSGPSPPLRDCGAEELLPPPSSSSSSSSSSSSCCRYPRPEHPAAALAAMNRLRLEGQLCDVTLRLRPHTELRAHRVVLAAASPVFRAMFTGGLRERGQAEVPIEGVQPRAMERLVEFAYTAAVAVGERCVLPLLHGALMYQVDAVVSACCAFLGGQLHPSNAIGIAALAERLGCLELQQKAQQYIYMNFAEVSKQEEFLSLSHCQLASLLSRDELNVRCESEVFQACVAWVQQERAARAPLLPLLLRAVRCHALTPRFLRAQLRRRRELGRDALRYLGRVFRELALHRPCGDRPPGRSPRARQLIYAAGGYLRRSLGTLEAFDPERGSWLRLAALEPPRSGLGGCAVGGLFYAVGGRNNSPQGNTDSAAVDCYNPVSGRWAPCAPMSVPRNRIGVGVIDGLIYAVGGSHGCTHHCSVERYEPERDEWAQVAPMGTRRIGLGVAVLHRLLYAVGGFDGSARLRSAERYHPERDRWQNIAPMNSVRSGAGVCALGNCLYAMGGYDGTQQLRSAERFRADTGTWSFVAPMGHRRSALGVAAFGGRIYVLGGYDGRSFLQSVECYDPAADAWTELAPMPAGRSGLGVAVTVEPCHPRDPRDPPPGPPPTRGPPPRRLLLTPAPPRGLGGWGGAGFPKFRIFPFPTPPPNPSPAGGGLRGAVGGSCQRDPSPKWHRGVPCPARGRFWGRFWRFTDRIKEMTDLWFNGEGVGGLGRGHGASGSVGSTGGLRGLHSVGTSPHR
SIO_010081: KEAP1
subclass of: SO_0000673
so part of: KEAP1
location: complement(join(212971..213542,214154..214330,215020..215225,215837..216519,217266..217415,218448..218870))
location: region:212971-218870:-1
so has part: feature:218448-218870:-1:exon
so has part: feature:217266-217415:-1:exon
so has part: feature:215837-216519:-1:exon
so has part: feature:215020-215225:-1:exon
so has part: feature:214154-214330:-1:exon
so has part: feature:212971-213542:-1:exon

XP_032601513.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:218448-218870:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:217266-217415:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:215837-216519:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:215020-215225:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:214154-214330:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:212971-213542:-1:exon

KEAP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: KEAP1
product: kelch like ECH associated protein 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_041711814.1
SIO_010081: KEAP1
subclass of: SO_0000673
so part of: KEAP1
location: complement(join(213205..213542,214154..214330,215036..215225,215837..216519,217266..217415,218448..218922,219866..220089))
location: region:213205-220089:-1
so has part: feature:219866-220089:-1:exon
so has part: feature:218448-218922:-1:exon
so has part: feature:217266-217415:-1:exon
so has part: feature:215837-216519:-1:exon
so has part: feature:215036-215225:-1:exon
so has part: feature:214154-214330:-1:exon
so has part: feature:213205-213542:-1:exon

position:213205:-1
position: 213205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:219866-220089:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:218448-218922:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:217266-217415:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:215837-216519:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:215036-215225:-1:exon

position:215036:-1
position: 215036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:214154-214330:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:213205-213542:-1:exon

KEAP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: KEAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kelch-like ECH-associated protein 1 isoform X2
translation: MSGPSPPLRDCGAEELLPPPSSSSSSSSSSSSCCRYPRPEHPAAALAAMNRLRLEGQLCDVTLRLRPHTELRAHRVVLAAASPVFRAMFTGGLRERGQAEVPIEGVQPRAMERLVEFAYTAAVAVGERCVLPLLHGALMYQVDAVVSACCAFLGGQLHPSNAIGIAALAERLGCLELQQKAQQYIYMNFAEVSKQEEFLSLSHCQLASLLSRDELNVRCESEVFQACVAWVQQERAARAPLLPLLLRAVRCHALTPRFLRAQLRRRRELGRDALRYLGRVFRELALHRPCGDRPPGRSPRARQLIYAAGGYLRRSLGTLEAFDPERGSWLRLAALEPPRSGLGGCAVGGLFYAVGGRNNSPQGNTDSAAVDCYNPVSGRWAPCAPMSVPRNRIGVGVIDGLIYAVGGSHGCTHHCSVERYEPERDEWAQVAPMGTRRIGLGVAVLHRLLYAVGGFDGSARLRSAERYHPERDRWQNIAPMNSGCAPWGTACTPWGGTTARSSCAAPSASAPTPAPGASWHPWDTGAAPWAWRPSGAGSTCWGATMAARSCSRWSATTPRPTPGPSWRRCPRGAAGWGWPSPWSPATPGTPGTPPQDPPPPGDPPPGGSC
SIO_010081: KEAP1
subclass of: SO_0000673
so part of: KEAP1
location: complement(join(213336..213542,214154..214330,215036..215225,215837..216519,217266..217415,218448..218870))
location: region:213336-218870:-1
so has part: feature:218448-218870:-1:exon
so has part: feature:217266-217415:-1:exon
so has part: feature:215837-216519:-1:exon
so has part: feature:215036-215225:-1:exon
so has part: feature:214154-214330:-1:exon
so has part: feature:213336-213542:-1:exon

XP_041567748.1
type: Protein
SIO_000068: ncbiprotein

position:213336:-1
position: 213336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:218448-218870:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:217266-217415:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:215837-216519:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:215036-215225:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:214154-214330:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:213336-213542:-1:exon

ATG4D
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: ATG4D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <220547..225013
location: region:220547-225013:1
so has part: feature:220547-225013:1:exon
subclass of: SO_0000010

115491854
type: Gene
SIO_000068: ncbigene

position:220547:1
position: 220547
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:225013:1
position: 225013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:220547-225013:1:exon

ATG4D
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: ATG4D
product: autophagy related 4D cysteine peptidase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041711645.1
SIO_010081: ATG4D
subclass of: SO_0000673
so part of: ATG4D
location: join(<220547..220691,221338..221421,221957..222133,222262..222728,222771..223084,223175..223239,223360..223808,223901..223979,224236..224312,224402..224518,224591..225013)
location: region:220547-225013:1
so has part: feature:220547-220691:1:exon
so has part: feature:221338-221421:1:exon
so has part: feature:221957-222133:1:exon
so has part: feature:222262-222728:1:exon
so has part: feature:222771-223084:1:exon
so has part: feature:223175-223239:1:exon
so has part: feature:223360-223808:1:exon
so has part: feature:223901-223979:1:exon
so has part: feature:224236-224312:1:exon
so has part: feature:224402-224518:1:exon
so has part: feature:224591-225013:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:220547-220691:1:exon

position:220691:1
position: 220691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:221338-221421:1:exon

position:221338:1
position: 221338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:221421:1
position: 221421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:221957-222133:1:exon

position:221957:1
position: 221957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:222133:1
position: 222133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:222262-222728:1:exon

position:222262:1
position: 222262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:222728:1
position: 222728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:222771-223084:1:exon

position:222771:1
position: 222771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:223084:1
position: 223084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:223175-223239:1:exon

position:223175:1
position: 223175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:223239:1
position: 223239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:223360-223808:1:exon

position:223360:1
position: 223360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:223808:1
position: 223808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:223901-223979:1:exon

position:223901:1
position: 223901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:223979:1
position: 223979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:224236-224312:1:exon

position:224236:1
position: 224236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:224312:1
position: 224312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:224402-224518:1:exon

position:224402:1
position: 224402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:224518:1
position: 224518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:224591-225013:1:exon

position:224591:1
position: 224591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ATG4D
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: ATG4D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cysteine protease ATG4D
translation: GGGGGPGPPPEPGPAPRPGPGPGPPPGAERSGQRVRGRVLAAWNSVKYGWTLRPRPHFSPRDPLYLLGRVYAPGNGEELARFRRDFCSRLWLTYRSGFPALPGTPARSSDCGWGCTLRSAQMLLGQGLLLHLLGRDWMWPEAPLEPEPRGSRRTRDPPGRTRDPRDGPRVSRDGHGSPRVDTATPGRMRNTPGPTRDPPGLTRPPQNGQGPPGMDTERSGRTRDPSGRARDPPGQPRDPSGRSQHPPGRVRDPPGQPRDPSGRVRDPSGQPRDPPGQPRDPSGRSQDPPGQPRDPPGRARDSPGQPRDPPGQPRDPSGRSQHPPGQPRDPPGQPRDPSGPPRAPRDAEQRHRAIVSWFSDHPRAPFGIHRLVELGREFGRSAGDWFGPAIAAHLLRGAVESCTETPGLAVYVAQDCTVYKEDVARLVRGDRDGRTAGHGAPGPGTPGLGSPGAPGPGTPGAPGPGTSGAPGPGTPGAPGLGSPGAPGPGTPGAPGPGTSGAPGPGTPGLGSPGAPGPGTPGAPGFGTSGAPGTPAAPEPGHRRGLVLLVPARLGGENLNPVYVECVKELLQLRSCLGIIGGKPRHSLYFLGFQGDSLLYLDPHLCQPCVDTAREDFPLQSFHCCFPRKMSFGKMDPSCTFGFYTAGTELEQLWGDLARALSPRSAPERYPIFTLAEGRARDHQTPDPPPGPPPPLPRRGKRPKKPNSEEFVLL
SIO_010081: ATG4D
subclass of: SO_0000673
so part of: ATG4D
location: join(<220547..220691,221338..221421,221957..222133,222262..222728,222771..223084,223175..223239,223360..223808,223901..223979,224236..224312,224402..224518,224591..224758)
location: region:220547-224758:1
so has part: feature:220547-220691:1:exon
so has part: feature:221338-221421:1:exon
so has part: feature:221957-222133:1:exon
so has part: feature:222262-222728:1:exon
so has part: feature:222771-223084:1:exon
so has part: feature:223175-223239:1:exon
so has part: feature:223360-223808:1:exon
so has part: feature:223901-223979:1:exon
so has part: feature:224236-224312:1:exon
so has part: feature:224402-224518:1:exon
so has part: feature:224591-224758:1:exon

XP_041567579.1
type: Protein
SIO_000068: ncbiprotein

position:224758:1
position: 224758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:220547-220691:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:221338-221421:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:221957-222133:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:222262-222728:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:222771-223084:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:223175-223239:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:223360-223808:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:223901-223979:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:224236-224312:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:224402-224518:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:224591-224758:1:exon

KRI1
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: KRI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(224931..231614)
location: region:224931-231614:-1
so has part: feature:224931-231614:-1:exon
subclass of: SO_0000010

115491847
type: Gene
SIO_000068: ncbigene

position:224931:-1
position: 224931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:231614:-1
position: 231614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:224931-231614:-1:exon

KRI1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: KRI1
product: KRI1 homolog, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_041711812.1
SIO_010081: KRI1
subclass of: SO_0000673
so part of: KRI1
location: complement(join(224931..225278,225320..225960,226063..226158,226261..226325,226402..226532,227184..227328,227560..227636,227725..227800,227868..228038,228116..228211,228719..228824,229052..229161,229278..229352,229846..229939,230028..230077,230169..230226,230705..230825,230925..231030,231103..231179,231493..231614))
location: region:224931-231614:-1
so has part: feature:231493-231614:-1:exon
so has part: feature:231103-231179:-1:exon
so has part: feature:230925-231030:-1:exon
so has part: feature:230705-230825:-1:exon
so has part: feature:230169-230226:-1:exon
so has part: feature:230028-230077:-1:exon
so has part: feature:229846-229939:-1:exon
so has part: feature:229278-229352:-1:exon
so has part: feature:229052-229161:-1:exon
so has part: feature:228719-228824:-1:exon
so has part: feature:228116-228211:-1:exon
so has part: feature:227868-228038:-1:exon
so has part: feature:227725-227800:-1:exon
so has part: feature:227560-227636:-1:exon
so has part: feature:227184-227328:-1:exon
so has part: feature:226402-226532:-1:exon
so has part: feature:226261-226325:-1:exon
so has part: feature:226063-226158:-1:exon
so has part: feature:225320-225960:-1:exon
so has part: feature:224931-225278:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:231493-231614:-1:exon

position:231493:-1
position: 231493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:231103-231179:-1:exon

position:231103:-1
position: 231103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:231179:-1
position: 231179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:230925-231030:-1:exon

position:230925:-1
position: 230925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:231030:-1
position: 231030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:230705-230825:-1:exon

position:230705:-1
position: 230705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:230825:-1
position: 230825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:230169-230226:-1:exon

position:230169:-1
position: 230169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:230226:-1
position: 230226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:230028-230077:-1:exon

position:230028:-1
position: 230028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:230077:-1
position: 230077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:229846-229939:-1:exon

position:229846:-1
position: 229846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:229939:-1
position: 229939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:229278-229352:-1:exon

position:229278:-1
position: 229278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:229352:-1
position: 229352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:229052-229161:-1:exon

position:229052:-1
position: 229052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:229161:-1
position: 229161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:228719-228824:-1:exon

position:228719:-1
position: 228719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:228824:-1
position: 228824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:228116-228211:-1:exon

position:228116:-1
position: 228116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:228211:-1
position: 228211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:227868-228038:-1:exon

position:227868:-1
position: 227868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:228038:-1
position: 228038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:227725-227800:-1:exon

position:227725:-1
position: 227725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:227800:-1
position: 227800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:227560-227636:-1:exon

position:227560:-1
position: 227560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:227636:-1
position: 227636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:227184-227328:-1:exon

position:227184:-1
position: 227184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:227328:-1
position: 227328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:226402-226532:-1:exon

position:226402:-1
position: 226402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:226532:-1
position: 226532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:226261-226325:-1:exon

position:226261:-1
position: 226261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:226325:-1
position: 226325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:226063-226158:-1:exon

position:226063:-1
position: 226063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:226158:-1
position: 226158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:225320-225960:-1:exon

position:225320:-1
position: 225320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:225960:-1
position: 225960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:224931-225278:-1:exon

position:225278:-1
position: 225278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KRI1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: KRI1
product: KRI1 homolog, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
transcript id: XM_030260320.3
SIO_010081: KRI1
subclass of: SO_0000673
so part of: KRI1
location: complement(join(224931..225960,226063..226158,226261..226325,226402..226532,227184..227328,227560..227636,227725..227800,227868..228038,228116..228211,228719..228824,229052..229161,229278..229352,229846..229939,230028..230077,230169..230226,230705..230825,230925..231030,231103..231179,231493..231614))
location: region:224931-231614:-1
so has part: feature:231493-231614:-1:exon
so has part: feature:231103-231179:-1:exon
so has part: feature:230925-231030:-1:exon
so has part: feature:230705-230825:-1:exon
so has part: feature:230169-230226:-1:exon
so has part: feature:230028-230077:-1:exon
so has part: feature:229846-229939:-1:exon
so has part: feature:229278-229352:-1:exon
so has part: feature:229052-229161:-1:exon
so has part: feature:228719-228824:-1:exon
so has part: feature:228116-228211:-1:exon
so has part: feature:227868-228038:-1:exon
so has part: feature:227725-227800:-1:exon
so has part: feature:227560-227636:-1:exon
so has part: feature:227184-227328:-1:exon
so has part: feature:226402-226532:-1:exon
so has part: feature:226261-226325:-1:exon
so has part: feature:226063-226158:-1:exon
so has part: feature:224931-225960:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:231493-231614:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:231103-231179:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:230925-231030:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:230705-230825:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:230169-230226:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:230028-230077:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:229846-229939:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:229278-229352:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:229052-229161:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:228719-228824:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:228116-228211:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:227868-228038:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:227725-227800:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:227560-227636:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:227184-227328:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:226402-226532:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:226261-226325:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:226063-226158:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:224931-225960:-1:exon

KRI1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: KRI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein KRI1 homolog
translation: MAEPELRVNAAFAERYGRYRRREELQRLRDRYGDSGDSTDSDSDSSESSGDDVPRDPRQDREFYRTLALLKTRDPRIYREDSTFFTGHESAEEDDDEDEDDEDEDDEERPARPMFLRDYERKVVLEKDGKFVDEEDEEDEEAAAKRRKAEASPSYAEEQRALKESFRAFVEEEEEEEEEGGGGALLRPRIRSREEKAQEEDQYLRWLRGQAEPPPEPLQDLEPLQKFWSDPGLEPGERFLRDFLLGCGQEEEEEGEEGAPLEDSSDEGEQFLQRQQDFERRHNFRFEEPGAAQIQTFPRHVPTSVRRRDERRKEKREQTRERKRKERARRREELKQLKNLKRQELAARIARIRHASGSAAFGLSRSLLLEDFDPARHDRLMAEWFGEEYYGREEEEKPQFEEEEGLDDDWNWDAWTGREEPPREPHCEDPDFVMDADYVPEAPPDPVAPPGRAPPEVTFGRKRRKTRFREALEREKPPFDPASGPFEQYLDEFYALDFEDVVGDLPCRFKYRRVLPCDFGLTTDEILAADDKELNRWCSLRKTCMYRSEQEERQDQANYSRRAQNVGKKLQILRSLVADPEEEEAAPAKLKFGKKRREKRKRLKEEEEEEEGEAPPAAPRNPGGPRRRGGPPLGAAVRLGGREFSGRRLEAFGLNPRRLRFRQLRRQQRRGKGGEPPEKARENGGNTGKNPGKNAGNSEKNPGNSGKNSGNTGKNTENTEKNPGNTEKNPGKNLGNTEKNPGNTGKNPGKNAGNTEKNPGENLGNTGKTAAVNGKKQKRRKNAPNPQENT
SIO_010081: KRI1
subclass of: SO_0000673
so part of: KRI1
location: complement(join(225324..225960,226063..226158,226261..226325,226402..226532,227184..227328,227560..227636,227725..227800,227868..228038,228116..228211,228719..228824,229052..229161,229278..229352,229846..229939,230028..230077,230169..230226,230705..230825,230925..231030,231103..231179,231493..231574))
location: region:225324-231574:-1
so has part: feature:231493-231574:-1:exon
so has part: feature:231103-231179:-1:exon
so has part: feature:230925-231030:-1:exon
so has part: feature:230705-230825:-1:exon
so has part: feature:230169-230226:-1:exon
so has part: feature:230028-230077:-1:exon
so has part: feature:229846-229939:-1:exon
so has part: feature:229278-229352:-1:exon
so has part: feature:229052-229161:-1:exon
so has part: feature:228719-228824:-1:exon
so has part: feature:228116-228211:-1:exon
so has part: feature:227868-228038:-1:exon
so has part: feature:227725-227800:-1:exon
so has part: feature:227560-227636:-1:exon
so has part: feature:227184-227328:-1:exon
so has part: feature:226402-226532:-1:exon
so has part: feature:226261-226325:-1:exon
so has part: feature:226063-226158:-1:exon
so has part: feature:225324-225960:-1:exon

XP_030116180.3
type: Protein
SIO_000068: ncbiprotein

position:225324:-1
position: 225324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:231574:-1
position: 231574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:231493-231574:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:231103-231179:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:230925-231030:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:230705-230825:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:230169-230226:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:230028-230077:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:229846-229939:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:229278-229352:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:229052-229161:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:228719-228824:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:228116-228211:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:227868-228038:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:227725-227800:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:227560-227636:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:227184-227328:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:226402-226532:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:226261-226325:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:226063-226158:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:225324-225960:-1:exon

KRI1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: KRI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein KRI1 homolog
translation: MAEPELRVNAAFAERYGRYRRREELQRLRDRYGDSGDSTDSDSDSSESSGDDVPRDPRQDREFYRTLALLKTRDPRIYREDSTFFTGHESAEEDDDEDEDDEDEDDEERPARPMFLRDYERKVVLEKDGKFVDEEDEEDEEAAAKRRKAEASPSYAEEQRALKESFRAFVEEEEEEEEEGGGGALLRPRIRSREEKAQEEDQYLRWLRGQAEPPPEPLQDLEPLQKFWSDPGLEPGERFLRDFLLGCGQEEEEEGEEGAPLEDSSDEGEQFLQRQQDFERRHNFRFEEPGAAQIQTFPRHVPTSVRRRDERRKEKREQTRERKRKERARRREELKQLKNLKRQELAARIARIRHASGSAAFGLSRSLLLEDFDPARHDRLMAEWFGEEYYGREEEEKPQFEEEEGLDDDWNWDAWTGREEPPREPHCEDPDFVMDADYVPEAPPDPVAPPGRAPPEVTFGRKRRKTRFREALEREKPPFDPASGPFEQYLDEFYALDFEDVVGDLPCRFKYRRVLPCDFGLTTDEILAADDKELNRWCSLRKTCMYRSEQEERQDQANYSRRAQNVGKKLQILRSLVADPEEEEAAPAKLKFGKKRREKRKRLKEEEEEEEGEAPPAAPRNPGGPRRRGGPPLGAAVRLGGREFSGRRLEAFGLNPRRLRFRQLRRQQRRGKGGEPPEKARENGGNTGKNPGKNAGNSEKNPGNSGKNSGNTGKNTENTEKNPGNTEKNPGKNLGNTEKNPGNTGKNPGKNAGNTEKNPGENLGNTGKTAAVNGKKQKRRKNAPNPQENT
SIO_010081: KRI1
subclass of: SO_0000673
so part of: KRI1
location: complement(join(225324..225960,226063..226158,226261..226325,226402..226532,227184..227328,227560..227636,227725..227800,227868..228038,228116..228211,228719..228824,229052..229161,229278..229352,229846..229939,230028..230077,230169..230226,230705..230825,230925..231030,231103..231179,231493..231574))
location: region:225324-231574:-1
so has part: feature:231493-231574:-1:exon
so has part: feature:231103-231179:-1:exon
so has part: feature:230925-231030:-1:exon
so has part: feature:230705-230825:-1:exon
so has part: feature:230169-230226:-1:exon
so has part: feature:230028-230077:-1:exon
so has part: feature:229846-229939:-1:exon
so has part: feature:229278-229352:-1:exon
so has part: feature:229052-229161:-1:exon
so has part: feature:228719-228824:-1:exon
so has part: feature:228116-228211:-1:exon
so has part: feature:227868-228038:-1:exon
so has part: feature:227725-227800:-1:exon
so has part: feature:227560-227636:-1:exon
so has part: feature:227184-227328:-1:exon
so has part: feature:226402-226532:-1:exon
so has part: feature:226261-226325:-1:exon
so has part: feature:226063-226158:-1:exon
so has part: feature:225324-225960:-1:exon

XP_041567746.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:231493-231574:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:231103-231179:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:230925-231030:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:230705-230825:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:230169-230226:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:230028-230077:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:229846-229939:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:229278-229352:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:229052-229161:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:228719-228824:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:228116-228211:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:227868-228038:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:227725-227800:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:227560-227636:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:227184-227328:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:226402-226532:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:226261-226325:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:226063-226158:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:225324-225960:-1:exon

AP1M2
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: AP1M2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(231978..237022)
location: region:231978-237022:-1
so has part: feature:231978-237022:-1:exon
subclass of: SO_0000010

115491761
type: Gene
SIO_000068: ncbigene

position:231978:-1
position: 231978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:237022:-1
position: 237022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:231978-237022:-1:exon

AP1M2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: AP1M2
product: adaptor related protein complex 1 subunit mu 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_041711825.1
SIO_010081: AP1M2
subclass of: SO_0000673
so part of: AP1M2
location: complement(join(231978..232078,232399..232474,232840..232965,233513..233671,233739..233810,234190..234332,234409..234535,235249..235396,235785..235915,236018..236085,236167..236323,236678..237022))
location: region:231978-237022:-1
so has part: feature:236678-237022:-1:exon
so has part: feature:236167-236323:-1:exon
so has part: feature:236018-236085:-1:exon
so has part: feature:235785-235915:-1:exon
so has part: feature:235249-235396:-1:exon
so has part: feature:234409-234535:-1:exon
so has part: feature:234190-234332:-1:exon
so has part: feature:233739-233810:-1:exon
so has part: feature:233513-233671:-1:exon
so has part: feature:232840-232965:-1:exon
so has part: feature:232399-232474:-1:exon
so has part: feature:231978-232078:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:236678-237022:-1:exon

position:236678:-1
position: 236678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:236167-236323:-1:exon

position:236167:-1
position: 236167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:236323:-1
position: 236323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:236018-236085:-1:exon

position:236018:-1
position: 236018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:236085:-1
position: 236085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:235785-235915:-1:exon

position:235785:-1
position: 235785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:235915:-1
position: 235915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:235249-235396:-1:exon

position:235249:-1
position: 235249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:235396:-1
position: 235396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:234409-234535:-1:exon

position:234409:-1
position: 234409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:234535:-1
position: 234535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:234190-234332:-1:exon

position:234190:-1
position: 234190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:234332:-1
position: 234332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:233739-233810:-1:exon

position:233739:-1
position: 233739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:233810:-1
position: 233810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:233513-233671:-1:exon

position:233513:-1
position: 233513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:233671:-1
position: 233671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:232840-232965:-1:exon

position:232840:-1
position: 232840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:232965:-1
position: 232965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:232399-232474:-1:exon

position:232399:-1
position: 232399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:232474:-1
position: 232474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:231978-232078:-1:exon

position:232078:-1
position: 232078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

AP1M2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: AP1M2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AP-1 complex subunit mu-2
translation: MAASSLFILDLKGKPLISRNYKGDVGPGEIENFMGVLLQREEEGTLTPVLSHGHVHFLWIKHANLYLVATTKKNGNASLVFSFLYKVVEVFCEYFKELEEESVRDNFVIVYELLDELMDFGFPQTTDSKILQEYITQEGNRLERGGGRVPSTVTNAVSWRSEGIRYKKNEVFIDVVEAVNLLVSASGSVVLSEVLGTIRLKVFLSGMPELRLGLNDRVLFELTGRGKNKSVELEDVKFHQCVRLSRFDNDRTIAFIPPDGDFELMSYRLHTQVKPLILIESIIEKFSHSRLEILVKAKGQFKKQSVANAVEIAVPVPSDADSPKVKTTAGSARYVPERNVLLWSIKSLPGGKEHLMRAHFGLPSVEKEEEEGRPPIAVRFEIPYFTVSGIQVRYMKIIEKSGYQALPWVRYITQSGDYQIRTS
SIO_010081: AP1M2
subclass of: SO_0000673
so part of: AP1M2
location: complement(join(232056..232078,232399..232474,232840..232965,233513..233671,233739..233810,234190..234332,234409..234535,235249..235396,235785..235915,236018..236085,236167..236323,236678..236719))
location: region:232056-236719:-1
so has part: feature:236678-236719:-1:exon
so has part: feature:236167-236323:-1:exon
so has part: feature:236018-236085:-1:exon
so has part: feature:235785-235915:-1:exon
so has part: feature:235249-235396:-1:exon
so has part: feature:234409-234535:-1:exon
so has part: feature:234190-234332:-1:exon
so has part: feature:233739-233810:-1:exon
so has part: feature:233513-233671:-1:exon
so has part: feature:232840-232965:-1:exon
so has part: feature:232399-232474:-1:exon
so has part: feature:232056-232078:-1:exon

XP_041567759.1
type: Protein
SIO_000068: ncbiprotein

position:232056:-1
position: 232056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:236719:-1
position: 236719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:236678-236719:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:236167-236323:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:236018-236085:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:235785-235915:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:235249-235396:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:234409-234535:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:234190-234332:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:233739-233810:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:233513-233671:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:232840-232965:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:232399-232474:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:232056-232078:-1:exon

SLC44A2
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: SLC44A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 237358..251282
location: region:237358-251282:1
so has part: feature:237358-251282:1:exon
subclass of: SO_0000010

115491718
type: Gene
SIO_000068: ncbigene

position:237358:1
position: 237358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:251282:1
position: 251282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:237358-251282:1:exon

SLC44A2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: SLC44A2
product: solute carrier family 44 member 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 4 long SRA reads, 8 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_041711808.1
SIO_010081: SLC44A2
subclass of: SO_0000673
so part of: SLC44A2
location: join(237358..237484,240097..240145,240469..240542,240622..240706,240800..240884,241236..241352,241609..241669,241803..241926,242163..242246,242679..242791,242974..243105,243602..243701,244317..244409,244666..244750,244839..245101,245178..245272,245642..245745,246085..246158,246262..246332,246461..246549,246910..246994,248680..251282)
location: region:237358-251282:1
so has part: feature:237358-237484:1:exon
so has part: feature:240097-240145:1:exon
so has part: feature:240469-240542:1:exon
so has part: feature:240622-240706:1:exon
so has part: feature:240800-240884:1:exon
so has part: feature:241236-241352:1:exon
so has part: feature:241609-241669:1:exon
so has part: feature:241803-241926:1:exon
so has part: feature:242163-242246:1:exon
so has part: feature:242679-242791:1:exon
so has part: feature:242974-243105:1:exon
so has part: feature:243602-243701:1:exon
so has part: feature:244317-244409:1:exon
so has part: feature:244666-244750:1:exon
so has part: feature:244839-245101:1:exon
so has part: feature:245178-245272:1:exon
so has part: feature:245642-245745:1:exon
so has part: feature:246085-246158:1:exon
so has part: feature:246262-246332:1:exon
so has part: feature:246461-246549:1:exon
so has part: feature:246910-246994:1:exon
so has part: feature:248680-251282:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:237358-237484:1:exon

position:237484:1
position: 237484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:240097-240145:1:exon

position:240097:1
position: 240097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:240145:1
position: 240145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:240469-240542:1:exon

position:240469:1
position: 240469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:240542:1
position: 240542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:240622-240706:1:exon

position:240622:1
position: 240622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:240706:1
position: 240706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:240800-240884:1:exon

position:240800:1
position: 240800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:240884:1
position: 240884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:241236-241352:1:exon

position:241236:1
position: 241236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:241352:1
position: 241352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:241609-241669:1:exon

position:241609:1
position: 241609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:241669:1
position: 241669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:241803-241926:1:exon

position:241803:1
position: 241803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:241926:1
position: 241926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:242163-242246:1:exon

position:242163:1
position: 242163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:242246:1
position: 242246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:242679-242791:1:exon

position:242679:1
position: 242679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:242791:1
position: 242791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:242974-243105:1:exon

position:242974:1
position: 242974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:243105:1
position: 243105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:243602-243701:1:exon

position:243602:1
position: 243602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:243701:1
position: 243701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:244317-244409:1:exon

position:244317:1
position: 244317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:244409:1
position: 244409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:244666-244750:1:exon

position:244666:1
position: 244666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:244750:1
position: 244750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:244839-245101:1:exon

position:244839:1
position: 244839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:245101:1
position: 245101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:245178-245272:1:exon

position:245178:1
position: 245178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:245272:1
position: 245272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:245642-245745:1:exon

position:245642:1
position: 245642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:245745:1
position: 245745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:246085-246158:1:exon

position:246085:1
position: 246085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:246158:1
position: 246158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:246262-246332:1:exon

position:246262:1
position: 246262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:246332:1
position: 246332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:246461-246549:1:exon

position:246461:1
position: 246461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:246549:1
position: 246549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:246910-246994:1:exon

position:246910:1
position: 246910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:246994:1
position: 246994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:248680-251282:1:exon

position:248680:1
position: 248680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SLC44A2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: SLC44A2
product: solute carrier family 44 member 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 2 long SRA reads, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_041711807.1
SIO_010081: SLC44A2
subclass of: SO_0000673
so part of: SLC44A2
location: join(237404..237484,240097..240145,240469..240542,240622..240706,240800..240884,241236..241352,241609..241669,241803..241926,242163..242246,242679..242791,242974..243105,243602..243701,244317..244409,244666..244750,244839..245101,245178..245272,245642..245745,246085..246158,246262..246332,246461..246549,246910..246994,247405..251282)
location: region:237404-251282:1
so has part: feature:237404-237484:1:exon
so has part: feature:240097-240145:1:exon
so has part: feature:240469-240542:1:exon
so has part: feature:240622-240706:1:exon
so has part: feature:240800-240884:1:exon
so has part: feature:241236-241352:1:exon
so has part: feature:241609-241669:1:exon
so has part: feature:241803-241926:1:exon
so has part: feature:242163-242246:1:exon
so has part: feature:242679-242791:1:exon
so has part: feature:242974-243105:1:exon
so has part: feature:243602-243701:1:exon
so has part: feature:244317-244409:1:exon
so has part: feature:244666-244750:1:exon
so has part: feature:244839-245101:1:exon
so has part: feature:245178-245272:1:exon
so has part: feature:245642-245745:1:exon
so has part: feature:246085-246158:1:exon
so has part: feature:246262-246332:1:exon
so has part: feature:246461-246549:1:exon
so has part: feature:246910-246994:1:exon
so has part: feature:247405-251282:1:exon

position:237404:1
position: 237404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:237404-237484:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:240097-240145:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:240469-240542:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:240622-240706:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:240800-240884:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:241236-241352:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:241609-241669:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:241803-241926:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:242163-242246:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:242679-242791:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:242974-243105:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:243602-243701:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:244317-244409:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:244666-244750:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:244839-245101:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:245178-245272:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:245642-245745:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:246085-246158:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:246262-246332:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:246461-246549:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:246910-246994:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:247405-251282:1:exon

position:247405:1
position: 247405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SLC44A2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: SLC44A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: choline transporter-like protein 2 isoform X4
translation: MDRPAGRRDPDGDYGTPQKYDPTFKGPIYDRGCTDIVCCVLLVVAIVGYVVVGVVAWTHGDPRKVIHPTDSRGQFCGQQGTPNEKKPFLFYFDIVKCASPLVLLEFQCPTTQICVSKCPDRYMTYLTAHGNAAALQYYRNFCTPESKSSKKAPLEVLRDKECPAMLIPSTPLARRCFPAIQAKKGVIMVGNETTYDDGHGRRRNVTELLEGAKKANVVLETRQLAMKIFEDYTVSWYWIIIGLVIAMVASLIFIVLLRFLAGVMVWVMIVMVILVLGYGIFHCYMEYAKLKGEAGSDVSLADLGFQTDLRVYLHLRQTWLAFLIILCVLELVIVLLLIFLRKRILIAIALIKEASRAVGHIMSSLLFPLCTFFLLCLCIAYWASTAVFLSTSNEAVYKVFNESACPFSGQTCRPETFNTSNVTKLCPDAQCLFAFYGGETAYHKYLIVLQFFNVFMFFWLANFVIALGQVTLAGAFASYYWAFKKPDDMPAFPLFSAFGRALRYHTGSLAFGSLVLAVVQVIRVTLEYLDHRLKAAENKFAKFLLSCLKCCFWCLEKFIKFLNRNAYIMIAIYGTNFCTSARNAFFLLMRNIIRVAVLDKVTDFLFFLGKLLIVGSVGILAFFFFTHRIKLVQDTAPPLNYYWVPILTVIVGSYLIAHGFFSVYGMCVDTLFLCFLEDLERNDGSAEKPYFMSQNLRKLLKKTNKGQPDA
SIO_010081: SLC44A2
subclass of: SO_0000673
so part of: SLC44A2
location: join(237442..237484,240097..240145,240469..240542,240622..240706,240800..240884,241236..241352,241609..241669,241803..241926,242163..242246,242679..242791,242974..243105,243602..243701,244317..244409,244666..244750,244839..245101,245178..245272,245642..245745,246085..246158,246262..246332,246461..246549,246910..246994,248680..248786)
location: region:237442-248786:1
so has part: feature:237442-237484:1:exon
so has part: feature:240097-240145:1:exon
so has part: feature:240469-240542:1:exon
so has part: feature:240622-240706:1:exon
so has part: feature:240800-240884:1:exon
so has part: feature:241236-241352:1:exon
so has part: feature:241609-241669:1:exon
so has part: feature:241803-241926:1:exon
so has part: feature:242163-242246:1:exon
so has part: feature:242679-242791:1:exon
so has part: feature:242974-243105:1:exon
so has part: feature:243602-243701:1:exon
so has part: feature:244317-244409:1:exon
so has part: feature:244666-244750:1:exon
so has part: feature:244839-245101:1:exon
so has part: feature:245178-245272:1:exon
so has part: feature:245642-245745:1:exon
so has part: feature:246085-246158:1:exon
so has part: feature:246262-246332:1:exon
so has part: feature:246461-246549:1:exon
so has part: feature:246910-246994:1:exon
so has part: feature:248680-248786:1:exon

XP_041567742.1
type: Protein
SIO_000068: ncbiprotein

position:237442:1
position: 237442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:248786:1
position: 248786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:237442-237484:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:240097-240145:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:240469-240542:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:240622-240706:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:240800-240884:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:241236-241352:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:241609-241669:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:241803-241926:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:242163-242246:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:242679-242791:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:242974-243105:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:243602-243701:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:244317-244409:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:244666-244750:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:244839-245101:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:245178-245272:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:245642-245745:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:246085-246158:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:246262-246332:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:246461-246549:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:246910-246994:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:248680-248786:1:exon

SLC44A2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: SLC44A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: choline transporter-like protein 2 isoform X3
translation: MDRPAGRRDPDGDYGTPQKYDPTFKGPIYDRGCTDIVCCVLLVVAIVGYVVVGVVAWTHGDPRKVIHPTDSRGQFCGQQGTPNEKKPFLFYFDIVKCASPLVLLEFQCPTTQICVSKCPDRYMTYLTAHGNAAALQYYRNFCTPESKSSKKAPLEVLRDKECPAMLIPSTPLARRCFPAIQAKKGVIMVGNETTYDDGHGRRRNVTELLEGAKKANVVLETRQLAMKIFEDYTVSWYWIIIGLVIAMVASLIFIVLLRFLAGVMVWVMIVMVILVLGYGIFHCYMEYAKLKGEAGSDVSLADLGFQTDLRVYLHLRQTWLAFLIILCVLELVIVLLLIFLRKRILIAIALIKEASRAVGHIMSSLLFPLCTFFLLCLCIAYWASTAVFLSTSNEAVYKVFNESACPFSGQTCRPETFNTSNVTKLCPDAQCLFAFYGGETAYHKYLIVLQFFNVFMFFWLANFVIALGQVTLAGAFASYYWAFKKPDDMPAFPLFSAFGRALRYHTGSLAFGSLVLAVVQVIRVTLEYLDHRLKAAENKFAKFLLSCLKCCFWCLEKFIKFLNRNAYIMIAIYGTNFCTSARNAFFLLMRNIIRVAVLDKVTDFLFFLGKLLIVGSVGILAFFFFTHRIKLVQDTAPPLNYYWVPILTVIVGSYLIAHGFFSVYGMCVDTLFLCFCEDLERNDGSPERPYYMSPELSEILLKGHLEPSKSADSQG
SIO_010081: SLC44A2
subclass of: SO_0000673
so part of: SLC44A2
location: join(237442..237484,240097..240145,240469..240542,240622..240706,240800..240884,241236..241352,241609..241669,241803..241926,242163..242246,242679..242791,242974..243105,243602..243701,244317..244409,244666..244750,244839..245101,245178..245272,245642..245745,246085..246158,246262..246332,246461..246549,246910..246994,247405..247526)
location: region:237442-247526:1
so has part: feature:237442-237484:1:exon
so has part: feature:240097-240145:1:exon
so has part: feature:240469-240542:1:exon
so has part: feature:240622-240706:1:exon
so has part: feature:240800-240884:1:exon
so has part: feature:241236-241352:1:exon
so has part: feature:241609-241669:1:exon
so has part: feature:241803-241926:1:exon
so has part: feature:242163-242246:1:exon
so has part: feature:242679-242791:1:exon
so has part: feature:242974-243105:1:exon
so has part: feature:243602-243701:1:exon
so has part: feature:244317-244409:1:exon
so has part: feature:244666-244750:1:exon
so has part: feature:244839-245101:1:exon
so has part: feature:245178-245272:1:exon
so has part: feature:245642-245745:1:exon
so has part: feature:246085-246158:1:exon
so has part: feature:246262-246332:1:exon
so has part: feature:246461-246549:1:exon
so has part: feature:246910-246994:1:exon
so has part: feature:247405-247526:1:exon

XP_041567741.1
type: Protein
SIO_000068: ncbiprotein

position:247526:1
position: 247526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:237442-237484:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:240097-240145:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:240469-240542:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:240622-240706:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:240800-240884:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:241236-241352:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:241609-241669:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:241803-241926:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:242163-242246:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:242679-242791:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:242974-243105:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:243602-243701:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:244317-244409:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:244666-244750:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:244839-245101:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:245178-245272:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:245642-245745:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:246085-246158:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:246262-246332:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:246461-246549:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:246910-246994:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:247405-247526:1:exon

SLC44A2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: SLC44A2
product: solute carrier family 44 member 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 2 long SRA reads, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 51 samples with support for all annotated introns
transcript id: XM_041711805.1
SIO_010081: SLC44A2
subclass of: SO_0000673
so part of: SLC44A2
location: join(238164..238860,240097..240145,240469..240542,240622..240706,240800..240884,241236..241352,241609..241669,241803..241926,242163..242246,242679..242791,242974..243105,243602..243701,244317..244409,244666..244750,244839..245101,245178..245272,245642..245745,246085..246158,246262..246332,246461..246549,246910..246994,247405..251282)
location: region:238164-251282:1
so has part: feature:238164-238860:1:exon
so has part: feature:240097-240145:1:exon
so has part: feature:240469-240542:1:exon
so has part: feature:240622-240706:1:exon
so has part: feature:240800-240884:1:exon
so has part: feature:241236-241352:1:exon
so has part: feature:241609-241669:1:exon
so has part: feature:241803-241926:1:exon
so has part: feature:242163-242246:1:exon
so has part: feature:242679-242791:1:exon
so has part: feature:242974-243105:1:exon
so has part: feature:243602-243701:1:exon
so has part: feature:244317-244409:1:exon
so has part: feature:244666-244750:1:exon
so has part: feature:244839-245101:1:exon
so has part: feature:245178-245272:1:exon
so has part: feature:245642-245745:1:exon
so has part: feature:246085-246158:1:exon
so has part: feature:246262-246332:1:exon
so has part: feature:246461-246549:1:exon
so has part: feature:246910-246994:1:exon
so has part: feature:247405-251282:1:exon

position:238164:1
position: 238164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:238164-238860:1:exon

position:238860:1
position: 238860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:240097-240145:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:240469-240542:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:240622-240706:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:240800-240884:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:241236-241352:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:241609-241669:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:241803-241926:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:242163-242246:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:242679-242791:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:242974-243105:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:243602-243701:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:244317-244409:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:244666-244750:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:244839-245101:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:245178-245272:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:245642-245745:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:246085-246158:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:246262-246332:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:246461-246549:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:246910-246994:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:247405-251282:1:exon

SLC44A2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: SLC44A2
product: solute carrier family 44 member 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 6 long SRA reads, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 52 samples with support for all annotated introns
transcript id: XM_041711806.1
SIO_010081: SLC44A2
subclass of: SO_0000673
so part of: SLC44A2
location: join(238171..238860,240097..240145,240469..240542,240622..240706,240800..240884,241236..241352,241609..241669,241803..241926,242163..242246,242679..242791,242974..243105,243602..243701,244317..244409,244666..244750,244839..245101,245178..245272,245642..245745,246085..246158,246262..246332,246461..246549,246910..246994,248680..251282)
location: region:238171-251282:1
so has part: feature:238171-238860:1:exon
so has part: feature:240097-240145:1:exon
so has part: feature:240469-240542:1:exon
so has part: feature:240622-240706:1:exon
so has part: feature:240800-240884:1:exon
so has part: feature:241236-241352:1:exon
so has part: feature:241609-241669:1:exon
so has part: feature:241803-241926:1:exon
so has part: feature:242163-242246:1:exon
so has part: feature:242679-242791:1:exon
so has part: feature:242974-243105:1:exon
so has part: feature:243602-243701:1:exon
so has part: feature:244317-244409:1:exon
so has part: feature:244666-244750:1:exon
so has part: feature:244839-245101:1:exon
so has part: feature:245178-245272:1:exon
so has part: feature:245642-245745:1:exon
so has part: feature:246085-246158:1:exon
so has part: feature:246262-246332:1:exon
so has part: feature:246461-246549:1:exon
so has part: feature:246910-246994:1:exon
so has part: feature:248680-251282:1:exon

position:238171:1
position: 238171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:238171-238860:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:240097-240145:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:240469-240542:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:240622-240706:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:240800-240884:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:241236-241352:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:241609-241669:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:241803-241926:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:242163-242246:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:242679-242791:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:242974-243105:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:243602-243701:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:244317-244409:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:244666-244750:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:244839-245101:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:245178-245272:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:245642-245745:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:246085-246158:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:246262-246332:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:246461-246549:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:246910-246994:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:248680-251282:1:exon

SLC44A2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: SLC44A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: choline transporter-like protein 2 isoform X2
translation: MGPASPRGERAPPAGPSRQEPDISRPFPTSALGLAGPHRAPGLPGTGAAAPRFAPVPEFPGNPGIGAAPGSLRCHPETEPGLAGAPRSPPEPPGAPRCPPVPVPAPPRSLRGGVRAPSVPRRADFGGAVTEAGSAEPCPARPSPARPGPGRTGTERGRRRDRGIAGMGGHGDNYYGKHGTPQKYDPTFKGPIYDRGCTDIVCCVLLVVAIVGYVVVGVVAWTHGDPRKVIHPTDSRGQFCGQQGTPNEKKPFLFYFDIVKCASPLVLLEFQCPTTQICVSKCPDRYMTYLTAHGNAAALQYYRNFCTPESKSSKKAPLEVLRDKECPAMLIPSTPLARRCFPAIQAKKGVIMVGNETTYDDGHGRRRNVTELLEGAKKANVVLETRQLAMKIFEDYTVSWYWIIIGLVIAMVASLIFIVLLRFLAGVMVWVMIVMVILVLGYGIFHCYMEYAKLKGEAGSDVSLADLGFQTDLRVYLHLRQTWLAFLIILCVLELVIVLLLIFLRKRILIAIALIKEASRAVGHIMSSLLFPLCTFFLLCLCIAYWASTAVFLSTSNEAVYKVFNESACPFSGQTCRPETFNTSNVTKLCPDAQCLFAFYGGETAYHKYLIVLQFFNVFMFFWLANFVIALGQVTLAGAFASYYWAFKKPDDMPAFPLFSAFGRALRYHTGSLAFGSLVLAVVQVIRVTLEYLDHRLKAAENKFAKFLLSCLKCCFWCLEKFIKFLNRNAYIMIAIYGTNFCTSARNAFFLLMRNIIRVAVLDKVTDFLFFLGKLLIVGSVGILAFFFFTHRIKLVQDTAPPLNYYWVPILTVIVGSYLIAHGFFSVYGMCVDTLFLCFLEDLERNDGSAEKPYFMSQNLRKLLKKTNKGQPDA
SIO_010081: SLC44A2
subclass of: SO_0000673
so part of: SLC44A2
location: join(238326..238860,240097..240145,240469..240542,240622..240706,240800..240884,241236..241352,241609..241669,241803..241926,242163..242246,242679..242791,242974..243105,243602..243701,244317..244409,244666..244750,244839..245101,245178..245272,245642..245745,246085..246158,246262..246332,246461..246549,246910..246994,248680..248786)
location: region:238326-248786:1
so has part: feature:238326-238860:1:exon
so has part: feature:240097-240145:1:exon
so has part: feature:240469-240542:1:exon
so has part: feature:240622-240706:1:exon
so has part: feature:240800-240884:1:exon
so has part: feature:241236-241352:1:exon
so has part: feature:241609-241669:1:exon
so has part: feature:241803-241926:1:exon
so has part: feature:242163-242246:1:exon
so has part: feature:242679-242791:1:exon
so has part: feature:242974-243105:1:exon
so has part: feature:243602-243701:1:exon
so has part: feature:244317-244409:1:exon
so has part: feature:244666-244750:1:exon
so has part: feature:244839-245101:1:exon
so has part: feature:245178-245272:1:exon
so has part: feature:245642-245745:1:exon
so has part: feature:246085-246158:1:exon
so has part: feature:246262-246332:1:exon
so has part: feature:246461-246549:1:exon
so has part: feature:246910-246994:1:exon
so has part: feature:248680-248786:1:exon

XP_041567740.1
type: Protein
SIO_000068: ncbiprotein

position:238326:1
position: 238326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:238326-238860:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:240097-240145:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:240469-240542:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:240622-240706:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:240800-240884:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:241236-241352:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:241609-241669:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:241803-241926:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:242163-242246:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:242679-242791:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:242974-243105:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:243602-243701:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:244317-244409:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:244666-244750:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:244839-245101:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:245178-245272:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:245642-245745:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:246085-246158:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:246262-246332:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:246461-246549:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:246910-246994:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:248680-248786:1:exon

SLC44A2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: SLC44A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: choline transporter-like protein 2 isoform X1
translation: MGPASPRGERAPPAGPSRQEPDISRPFPTSALGLAGPHRAPGLPGTGAAAPRFAPVPEFPGNPGIGAAPGSLRCHPETEPGLAGAPRSPPEPPGAPRCPPVPVPAPPRSLRGGVRAPSVPRRADFGGAVTEAGSAEPCPARPSPARPGPGRTGTERGRRRDRGIAGMGGHGDNYYGKHGTPQKYDPTFKGPIYDRGCTDIVCCVLLVVAIVGYVVVGVVAWTHGDPRKVIHPTDSRGQFCGQQGTPNEKKPFLFYFDIVKCASPLVLLEFQCPTTQICVSKCPDRYMTYLTAHGNAAALQYYRNFCTPESKSSKKAPLEVLRDKECPAMLIPSTPLARRCFPAIQAKKGVIMVGNETTYDDGHGRRRNVTELLEGAKKANVVLETRQLAMKIFEDYTVSWYWIIIGLVIAMVASLIFIVLLRFLAGVMVWVMIVMVILVLGYGIFHCYMEYAKLKGEAGSDVSLADLGFQTDLRVYLHLRQTWLAFLIILCVLELVIVLLLIFLRKRILIAIALIKEASRAVGHIMSSLLFPLCTFFLLCLCIAYWASTAVFLSTSNEAVYKVFNESACPFSGQTCRPETFNTSNVTKLCPDAQCLFAFYGGETAYHKYLIVLQFFNVFMFFWLANFVIALGQVTLAGAFASYYWAFKKPDDMPAFPLFSAFGRALRYHTGSLAFGSLVLAVVQVIRVTLEYLDHRLKAAENKFAKFLLSCLKCCFWCLEKFIKFLNRNAYIMIAIYGTNFCTSARNAFFLLMRNIIRVAVLDKVTDFLFFLGKLLIVGSVGILAFFFFTHRIKLVQDTAPPLNYYWVPILTVIVGSYLIAHGFFSVYGMCVDTLFLCFCEDLERNDGSPERPYYMSPELSEILLKGHLEPSKSADSQG
SIO_010081: SLC44A2
subclass of: SO_0000673
so part of: SLC44A2
location: join(238326..238860,240097..240145,240469..240542,240622..240706,240800..240884,241236..241352,241609..241669,241803..241926,242163..242246,242679..242791,242974..243105,243602..243701,244317..244409,244666..244750,244839..245101,245178..245272,245642..245745,246085..246158,246262..246332,246461..246549,246910..246994,247405..247526)
location: region:238326-247526:1
so has part: feature:238326-238860:1:exon
so has part: feature:240097-240145:1:exon
so has part: feature:240469-240542:1:exon
so has part: feature:240622-240706:1:exon
so has part: feature:240800-240884:1:exon
so has part: feature:241236-241352:1:exon
so has part: feature:241609-241669:1:exon
so has part: feature:241803-241926:1:exon
so has part: feature:242163-242246:1:exon
so has part: feature:242679-242791:1:exon
so has part: feature:242974-243105:1:exon
so has part: feature:243602-243701:1:exon
so has part: feature:244317-244409:1:exon
so has part: feature:244666-244750:1:exon
so has part: feature:244839-245101:1:exon
so has part: feature:245178-245272:1:exon
so has part: feature:245642-245745:1:exon
so has part: feature:246085-246158:1:exon
so has part: feature:246262-246332:1:exon
so has part: feature:246461-246549:1:exon
so has part: feature:246910-246994:1:exon
so has part: feature:247405-247526:1:exon

XP_041567739.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:238326-238860:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:240097-240145:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:240469-240542:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:240622-240706:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:240800-240884:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:241236-241352:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:241609-241669:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:241803-241926:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:242163-242246:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:242679-242791:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:242974-243105:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:243602-243701:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:244317-244409:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:244666-244750:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:244839-245101:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:245178-245272:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:245642-245745:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:246085-246158:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:246262-246332:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:246461-246549:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:246910-246994:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:247405-247526:1:exon

ILF3
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: ILF3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 252301..268733
location: region:252301-268733:1
so has part: feature:252301-268733:1:exon
subclass of: SO_0000010

100219622
type: Gene
SIO_000068: ncbigene

position:252301:1
position: 252301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:268733:1
position: 268733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:252301-268733:1:exon

ILF3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: ILF3
product: interleukin enhancer binding factor 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 89 samples with support for all annotated introns
transcript id: XM_030260007.3
SIO_010081: ILF3
subclass of: SO_0000673
so part of: ILF3
location: join(252301..252423,254988..255083,255175..255401,255629..255809,256375..256522,257846..257937,258467..258562,260238..260349,260628..260725,261161..261272,261365..261493,262137..262336,262541..262711,262870..263007,263267..263443,264012..264168,264630..264683,267202..267561,268027..268155,268253..268733)
location: region:252301-268733:1
so has part: feature:252301-252423:1:exon
so has part: feature:254988-255083:1:exon
so has part: feature:255175-255401:1:exon
so has part: feature:255629-255809:1:exon
so has part: feature:256375-256522:1:exon
so has part: feature:257846-257937:1:exon
so has part: feature:258467-258562:1:exon
so has part: feature:260238-260349:1:exon
so has part: feature:260628-260725:1:exon
so has part: feature:261161-261272:1:exon
so has part: feature:261365-261493:1:exon
so has part: feature:262137-262336:1:exon
so has part: feature:262541-262711:1:exon
so has part: feature:262870-263007:1:exon
so has part: feature:263267-263443:1:exon
so has part: feature:264012-264168:1:exon
so has part: feature:264630-264683:1:exon
so has part: feature:267202-267561:1:exon
so has part: feature:268027-268155:1:exon
so has part: feature:268253-268733:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:252301-252423:1:exon

position:252423:1
position: 252423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:254988-255083:1:exon

position:254988:1
position: 254988
reference: sequence
type: ForwardStrandPosition
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position:255083:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 3
SIO_000628: feature:255175-255401:1:exon

position:255175:1
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reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:255401:1
position: 255401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:255629-255809:1:exon

position:255629:1
position: 255629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:255809:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 5
SIO_000628: feature:256375-256522:1:exon

position:256375:1
position: 256375
reference: sequence
type: ForwardStrandPosition
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position:256522:1
position: 256522
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 6
SIO_000628: feature:257846-257937:1:exon

position:257846:1
position: 257846
reference: sequence
type: ForwardStrandPosition
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position:257937:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 7
SIO_000628: feature:258467-258562:1:exon

position:258467:1
position: 258467
reference: sequence
type: ForwardStrandPosition
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position:258562:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 8
SIO_000628: feature:260238-260349:1:exon

position:260238:1
position: 260238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:260349:1
position: 260349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:260628-260725:1:exon

position:260628:1
position: 260628
reference: sequence
type: ForwardStrandPosition
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position:260725:1
position: 260725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:261161-261272:1:exon

position:261161:1
position: 261161
reference: sequence
type: ForwardStrandPosition
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position:261272:1
position: 261272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:261365-261493:1:exon

position:261365:1
position: 261365
reference: sequence
type: ForwardStrandPosition
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position:261493:1
position: 261493
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 12
SIO_000628: feature:262137-262336:1:exon

position:262137:1
position: 262137
reference: sequence
type: ForwardStrandPosition
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position:262336:1
position: 262336
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 13
SIO_000628: feature:262541-262711:1:exon

position:262541:1
position: 262541
reference: sequence
type: ForwardStrandPosition
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position:262711:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 14
SIO_000628: feature:262870-263007:1:exon

position:262870:1
position: 262870
reference: sequence
type: ForwardStrandPosition
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position:263007:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 15
SIO_000628: feature:263267-263443:1:exon

position:263267:1
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reference: sequence
type: ForwardStrandPosition
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position:263443:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 16
SIO_000628: feature:264012-264168:1:exon

position:264012:1
position: 264012
reference: sequence
type: ForwardStrandPosition
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position:264168:1
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reference: sequence
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urn:…
SIO_000300: 17
SIO_000628: feature:264630-264683:1:exon

position:264630:1
position: 264630
reference: sequence
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position:264683:1
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reference: sequence
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urn:…
SIO_000300: 18
SIO_000628: feature:267202-267561:1:exon

position:267202:1
position: 267202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:267561:1
position: 267561
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 19
SIO_000628: feature:268027-268155:1:exon

position:268027:1
position: 268027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:268155:1
position: 268155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:268253-268733:1:exon

position:268253:1
position: 268253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ILF3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: ILF3
product: interleukin enhancer binding factor 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 66 samples with support for all annotated introns
transcript id: XM_030260006.3
SIO_010081: ILF3
subclass of: SO_0000673
so part of: ILF3
location: join(252573..252659,254988..255083,255175..255401,255629..255809,256375..256522,257846..257937,258467..258562,260238..260349,260628..260725,261161..261272,261365..261493,262137..262336,262541..262711,262870..263007,263267..263443,264012..264168,264630..264683,267202..267561,268027..268155,268253..268733)
location: region:252573-268733:1
so has part: feature:252573-252659:1:exon
so has part: feature:254988-255083:1:exon
so has part: feature:255175-255401:1:exon
so has part: feature:255629-255809:1:exon
so has part: feature:256375-256522:1:exon
so has part: feature:257846-257937:1:exon
so has part: feature:258467-258562:1:exon
so has part: feature:260238-260349:1:exon
so has part: feature:260628-260725:1:exon
so has part: feature:261161-261272:1:exon
so has part: feature:261365-261493:1:exon
so has part: feature:262137-262336:1:exon
so has part: feature:262541-262711:1:exon
so has part: feature:262870-263007:1:exon
so has part: feature:263267-263443:1:exon
so has part: feature:264012-264168:1:exon
so has part: feature:264630-264683:1:exon
so has part: feature:267202-267561:1:exon
so has part: feature:268027-268155:1:exon
so has part: feature:268253-268733:1:exon

position:252573:1
position: 252573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:252573-252659:1:exon

position:252659:1
position: 252659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:254988-255083:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:255175-255401:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:255629-255809:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:256375-256522:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:257846-257937:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:258467-258562:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:260238-260349:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:260628-260725:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:261161-261272:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:261365-261493:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:262137-262336:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:262541-262711:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:262870-263007:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:263267-263443:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:264012-264168:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:264630-264683:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:267202-267561:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:268027-268155:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:268253-268733:1:exon

ILF3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: ILF3
product: interleukin enhancer binding factor 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 66 samples with support for all annotated introns
transcript id: XM_030260008.3
SIO_010081: ILF3
subclass of: SO_0000673
so part of: ILF3
location: join(252573..252659,254988..255083,255175..255401,255629..255809,256375..256522,257846..257937,258467..258562,260238..260349,260628..260725,261161..261272,261365..261493,262137..262336,262541..262711,262870..263007,263267..263443,264015..264168,264630..264683,267202..267561,268027..268155,268253..268733)
location: region:252573-268733:1
so has part: feature:252573-252659:1:exon
so has part: feature:254988-255083:1:exon
so has part: feature:255175-255401:1:exon
so has part: feature:255629-255809:1:exon
so has part: feature:256375-256522:1:exon
so has part: feature:257846-257937:1:exon
so has part: feature:258467-258562:1:exon
so has part: feature:260238-260349:1:exon
so has part: feature:260628-260725:1:exon
so has part: feature:261161-261272:1:exon
so has part: feature:261365-261493:1:exon
so has part: feature:262137-262336:1:exon
so has part: feature:262541-262711:1:exon
so has part: feature:262870-263007:1:exon
so has part: feature:263267-263443:1:exon
so has part: feature:264015-264168:1:exon
so has part: feature:264630-264683:1:exon
so has part: feature:267202-267561:1:exon
so has part: feature:268027-268155:1:exon
so has part: feature:268253-268733:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:252573-252659:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:254988-255083:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:255175-255401:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:255629-255809:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:256375-256522:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:257846-257937:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:258467-258562:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:260238-260349:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:260628-260725:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:261161-261272:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:261365-261493:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:262137-262336:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:262541-262711:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:262870-263007:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:263267-263443:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:264015-264168:1:exon

position:264015:1
position: 264015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:264630-264683:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:267202-267561:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:268027-268155:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:268253-268733:1:exon

ILF3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: ILF3
product: interleukin enhancer binding factor 3, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 67 samples with support for all annotated introns
transcript id: XM_030260011.3
SIO_010081: ILF3
subclass of: SO_0000673
so part of: ILF3
location: join(252573..252659,254988..255083,255175..255401,255629..255809,256375..256522,257846..257937,258467..258562,260238..260349,260628..260725,261161..261272,261365..261475,262137..262336,262541..262711,262870..263007,263267..263443,264015..264168,264630..264683,267202..267561,268027..268155,268253..268733)
location: region:252573-268733:1
so has part: feature:252573-252659:1:exon
so has part: feature:254988-255083:1:exon
so has part: feature:255175-255401:1:exon
so has part: feature:255629-255809:1:exon
so has part: feature:256375-256522:1:exon
so has part: feature:257846-257937:1:exon
so has part: feature:258467-258562:1:exon
so has part: feature:260238-260349:1:exon
so has part: feature:260628-260725:1:exon
so has part: feature:261161-261272:1:exon
so has part: feature:261365-261475:1:exon
so has part: feature:262137-262336:1:exon
so has part: feature:262541-262711:1:exon
so has part: feature:262870-263007:1:exon
so has part: feature:263267-263443:1:exon
so has part: feature:264015-264168:1:exon
so has part: feature:264630-264683:1:exon
so has part: feature:267202-267561:1:exon
so has part: feature:268027-268155:1:exon
so has part: feature:268253-268733:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:252573-252659:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:254988-255083:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:255175-255401:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:255629-255809:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:256375-256522:1:exon

urn:…
SIO_000300: 6
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urn:…
SIO_000300: 7
SIO_000628: feature:258467-258562:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:260238-260349:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:260628-260725:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:261161-261272:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:261365-261475:1:exon

position:261475:1
position: 261475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:262137-262336:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:262541-262711:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:262870-263007:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:263267-263443:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:264015-264168:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:264630-264683:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:267202-267561:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:268027-268155:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:268253-268733:1:exon

ILF3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: ILF3
product: interleukin enhancer binding factor 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 ESTs, 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 66 samples with support for all annotated introns
transcript id: XM_030260009.3
SIO_010081: ILF3
subclass of: SO_0000673
so part of: ILF3
location: join(252574..252659,254988..255083,255175..255401,255629..255809,256375..256522,257846..257937,258467..258562,260238..260349,260628..260725,261161..261272,261365..261493,262137..262336,262541..262711,262870..263007,263267..263443,264012..264168,264630..264683,267202..267561,268027..268146,268253..268733)
location: region:252574-268733:1
so has part: feature:252574-252659:1:exon
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so has part: feature:267202-267561:1:exon
so has part: feature:268027-268146:1:exon
so has part: feature:268253-268733:1:exon

position:252574:1
position: 252574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:252574-252659:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:254988-255083:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:255175-255401:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:255629-255809:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:256375-256522:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:257846-257937:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:258467-258562:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:260238-260349:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:260628-260725:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:261161-261272:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:261365-261493:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:262137-262336:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:262541-262711:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:262870-263007:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:263267-263443:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:264012-264168:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:264630-264683:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:267202-267561:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:268027-268146:1:exon

position:268146:1
position: 268146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:268253-268733:1:exon

ILF3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: ILF3
product: interleukin enhancer binding factor 3, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 ESTs, 1 long SRA read, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 67 samples with support for all annotated introns
transcript id: XM_030260010.3
SIO_010081: ILF3
subclass of: SO_0000673
so part of: ILF3
location: join(252574..252659,254988..255083,255175..255401,255629..255809,256375..256522,257846..257937,258467..258562,260238..260349,260628..260725,261161..261272,261365..261475,262137..262336,262541..262711,262870..263007,263267..263443,264012..264168,264630..264683,267202..267561,268027..268155,268253..268733)
location: region:252574-268733:1
so has part: feature:252574-252659:1:exon
so has part: feature:254988-255083:1:exon
so has part: feature:255175-255401:1:exon
so has part: feature:255629-255809:1:exon
so has part: feature:256375-256522:1:exon
so has part: feature:257846-257937:1:exon
so has part: feature:258467-258562:1:exon
so has part: feature:260238-260349:1:exon
so has part: feature:260628-260725:1:exon
so has part: feature:261161-261272:1:exon
so has part: feature:261365-261475:1:exon
so has part: feature:262137-262336:1:exon
so has part: feature:262541-262711:1:exon
so has part: feature:262870-263007:1:exon
so has part: feature:263267-263443:1:exon
so has part: feature:264012-264168:1:exon
so has part: feature:264630-264683:1:exon
so has part: feature:267202-267561:1:exon
so has part: feature:268027-268155:1:exon
so has part: feature:268253-268733:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:252574-252659:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:254988-255083:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:255175-255401:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:255629-255809:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:256375-256522:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:257846-257937:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:258467-258562:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:260238-260349:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:260628-260725:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:261161-261272:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:261365-261475:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:262137-262336:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:262541-262711:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:262870-263007:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:263267-263443:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:264012-264168:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:264630-264683:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:267202-267561:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:268027-268155:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:268253-268733:1:exon

ILF3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: ILF3
product: interleukin enhancer binding factor 3, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 ESTs, 1 long SRA read, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 67 samples with support for all annotated introns
transcript id: XM_030260014.3
SIO_010081: ILF3
subclass of: SO_0000673
so part of: ILF3
location: join(252574..252659,254988..255083,255175..255401,255629..255809,256375..256522,257846..257937,258467..258562,260238..260349,260628..260725,261161..261272,261365..261475,262137..262336,262541..262711,262870..263007,263267..263443,264015..264168,264630..264683,267202..267561,268027..268146,268253..268733)
location: region:252574-268733:1
so has part: feature:252574-252659:1:exon
so has part: feature:254988-255083:1:exon
so has part: feature:255175-255401:1:exon
so has part: feature:255629-255809:1:exon
so has part: feature:256375-256522:1:exon
so has part: feature:257846-257937:1:exon
so has part: feature:258467-258562:1:exon
so has part: feature:260238-260349:1:exon
so has part: feature:260628-260725:1:exon
so has part: feature:261161-261272:1:exon
so has part: feature:261365-261475:1:exon
so has part: feature:262137-262336:1:exon
so has part: feature:262541-262711:1:exon
so has part: feature:262870-263007:1:exon
so has part: feature:263267-263443:1:exon
so has part: feature:264015-264168:1:exon
so has part: feature:264630-264683:1:exon
so has part: feature:267202-267561:1:exon
so has part: feature:268027-268146:1:exon
so has part: feature:268253-268733:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:252574-252659:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:254988-255083:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:255175-255401:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:255629-255809:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:256375-256522:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:257846-257937:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:258467-258562:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:260238-260349:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:260628-260725:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:261161-261272:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:261365-261475:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:262137-262336:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:262541-262711:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:262870-263007:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:263267-263443:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:264015-264168:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:264630-264683:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:267202-267561:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:268027-268146:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:268253-268733:1:exon

ILF3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: ILF3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin enhancer-binding factor 3 isoform X1
translation: MRPMRIFVNDDRHVMAKHSAVYPTQEELEAVQNMVSHTERALKAVSDWIDEQEKVSGEQPETESMETAAEEENKEGGDQKATEQLTRTLRGVMRVGLVAKGLLLKGDLDLELVLLCKDKPTAKLLEKVADNLGVQLAAITEDKYEIIQSVGDAAIVIKNTKEPPLSLTIHLTSPVVREELEKQLAGETLSVTDSPDVLDRQKCLAALASLRHAKWFQARANGLKSCVIVIRVLRDLCTRVPTWAPLRGWPLELLCEKSIGTANRPMGAGEALRRVLECLASGIVMPDGSGIYDPCEKEATDAIGHLDRQQREDITQSAQHALRLAAFGQLHKVLGMDPLPSKMPKKPKNENPVDYTVQIPPSTTYAVTPMKRPMEEDGEEKSPSKKKKKIQKKGIELTREEKLEPPQAMNALMKLNQLKPGLQYKLVSQTGPVHAPIFTMSVEIDGSTFEASGPSKKTAKLHVAVKVLQDMGLPTGVEGKDSGKGDESAEETETKPVVVAPPPVVETVSTPTAASPPSDQTPENVKQQGPILTKHGKNPVMELNEKRRGLKYELISETGGSHDKRFVMEVEVDGQKFQGAGSNKKVAKAYAALAALEKLFPDAPVAIEQNKKKRAPVPARGGPKFPVKQHNPGFGMGGGPMHNEAPPPPNMRGRGRGGNMRGRGRGRGGFGGNHGGYMNTGAGYGNYGYGGNSATAGYSQFYSNGGHSNSGGGGGGGGGGGGSSGYGSYYQGGDGYTAPAPPKHGGKKQQHGGGQKASYGSGYASHQGQQSYGQGQYGSYGPGQGKQKGYGHGQGGYSYSNSYNSPGGGSDYNYESKYSYSGNSGRGGGGNNYSGGGSYNSGSHGGYGGSGGGGSSYQGKAGGYSSQSNYNSPGSQNYSGPPSSYQASQGGYGRNEHSMSYQYR
SIO_010081: ILF3
subclass of: SO_0000673
so part of: ILF3
location: join(255081..255083,255175..255401,255629..255809,256375..256522,257846..257937,258467..258562,260238..260349,260628..260725,261161..261272,261365..261493,262137..262336,262541..262711,262870..263007,263267..263443,264012..264168,264630..264683,267202..267561,268027..268155,268253..268383)
location: region:255081-268383:1
so has part: feature:255081-255083:1:exon
so has part: feature:255175-255401:1:exon
so has part: feature:255629-255809:1:exon
so has part: feature:256375-256522:1:exon
so has part: feature:257846-257937:1:exon
so has part: feature:258467-258562:1:exon
so has part: feature:260238-260349:1:exon
so has part: feature:260628-260725:1:exon
so has part: feature:261161-261272:1:exon
so has part: feature:261365-261493:1:exon
so has part: feature:262137-262336:1:exon
so has part: feature:262541-262711:1:exon
so has part: feature:262870-263007:1:exon
so has part: feature:263267-263443:1:exon
so has part: feature:264012-264168:1:exon
so has part: feature:264630-264683:1:exon
so has part: feature:267202-267561:1:exon
so has part: feature:268027-268155:1:exon
so has part: feature:268253-268383:1:exon

XP_030115866.3
type: Protein
SIO_000068: ncbiprotein

position:255081:1
position: 255081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:268383:1
position: 268383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:255081-255083:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:255175-255401:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:255629-255809:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:256375-256522:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:257846-257937:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:258467-258562:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:260238-260349:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:260628-260725:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:261161-261272:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:261365-261493:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:262137-262336:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:262541-262711:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:262870-263007:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:263267-263443:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:264012-264168:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:264630-264683:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:267202-267561:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:268027-268155:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:268253-268383:1:exon

ILF3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: ILF3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin enhancer-binding factor 3 isoform X1
translation: MRPMRIFVNDDRHVMAKHSAVYPTQEELEAVQNMVSHTERALKAVSDWIDEQEKVSGEQPETESMETAAEEENKEGGDQKATEQLTRTLRGVMRVGLVAKGLLLKGDLDLELVLLCKDKPTAKLLEKVADNLGVQLAAITEDKYEIIQSVGDAAIVIKNTKEPPLSLTIHLTSPVVREELEKQLAGETLSVTDSPDVLDRQKCLAALASLRHAKWFQARANGLKSCVIVIRVLRDLCTRVPTWAPLRGWPLELLCEKSIGTANRPMGAGEALRRVLECLASGIVMPDGSGIYDPCEKEATDAIGHLDRQQREDITQSAQHALRLAAFGQLHKVLGMDPLPSKMPKKPKNENPVDYTVQIPPSTTYAVTPMKRPMEEDGEEKSPSKKKKKIQKKGIELTREEKLEPPQAMNALMKLNQLKPGLQYKLVSQTGPVHAPIFTMSVEIDGSTFEASGPSKKTAKLHVAVKVLQDMGLPTGVEGKDSGKGDESAEETETKPVVVAPPPVVETVSTPTAASPPSDQTPENVKQQGPILTKHGKNPVMELNEKRRGLKYELISETGGSHDKRFVMEVEVDGQKFQGAGSNKKVAKAYAALAALEKLFPDAPVAIEQNKKKRAPVPARGGPKFPVKQHNPGFGMGGGPMHNEAPPPPNMRGRGRGGNMRGRGRGRGGFGGNHGGYMNTGAGYGNYGYGGNSATAGYSQFYSNGGHSNSGGGGGGGGGGGGSSGYGSYYQGGDGYTAPAPPKHGGKKQQHGGGQKASYGSGYASHQGQQSYGQGQYGSYGPGQGKQKGYGHGQGGYSYSNSYNSPGGGSDYNYESKYSYSGNSGRGGGGNNYSGGGSYNSGSHGGYGGSGGGGSSYQGKAGGYSSQSNYNSPGSQNYSGPPSSYQASQGGYGRNEHSMSYQYR
SIO_010081: ILF3
subclass of: SO_0000673
so part of: ILF3
location: join(255081..255083,255175..255401,255629..255809,256375..256522,257846..257937,258467..258562,260238..260349,260628..260725,261161..261272,261365..261493,262137..262336,262541..262711,262870..263007,263267..263443,264012..264168,264630..264683,267202..267561,268027..268155,268253..268383)
location: region:255081-268383:1
so has part: feature:255081-255083:1:exon
so has part: feature:255175-255401:1:exon
so has part: feature:255629-255809:1:exon
so has part: feature:256375-256522:1:exon
so has part: feature:257846-257937:1:exon
so has part: feature:258467-258562:1:exon
so has part: feature:260238-260349:1:exon
so has part: feature:260628-260725:1:exon
so has part: feature:261161-261272:1:exon
so has part: feature:261365-261493:1:exon
so has part: feature:262137-262336:1:exon
so has part: feature:262541-262711:1:exon
so has part: feature:262870-263007:1:exon
so has part: feature:263267-263443:1:exon
so has part: feature:264012-264168:1:exon
so has part: feature:264630-264683:1:exon
so has part: feature:267202-267561:1:exon
so has part: feature:268027-268155:1:exon
so has part: feature:268253-268383:1:exon

XP_030115867.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:255081-255083:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:255175-255401:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:255629-255809:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:256375-256522:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:257846-257937:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:258467-258562:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:260238-260349:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:260628-260725:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:261161-261272:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:261365-261493:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:262137-262336:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:262541-262711:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:262870-263007:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:263267-263443:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:264012-264168:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:264630-264683:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:267202-267561:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:268027-268155:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:268253-268383:1:exon

ILF3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: ILF3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin enhancer-binding factor 3 isoform X3
translation: MRPMRIFVNDDRHVMAKHSAVYPTQEELEAVQNMVSHTERALKAVSDWIDEQEKVSGEQPETESMETAAEEENKEGGDQKATEQLTRTLRGVMRVGLVAKGLLLKGDLDLELVLLCKDKPTAKLLEKVADNLGVQLAAITEDKYEIIQSVGDAAIVIKNTKEPPLSLTIHLTSPVVREELEKQLAGETLSVTDSPDVLDRQKCLAALASLRHAKWFQARANGLKSCVIVIRVLRDLCTRVPTWAPLRGWPLELLCEKSIGTANRPMGAGEALRRVLECLASGIVMPDGSGIYDPCEKEATDAIGHLDRQQREDITQSAQHALRLAAFGQLHKVLGMDPLPSKMPKKPKNENPVDYTVQIPPSTTYAVTPMKRPMEEDGEEKSPSKKKKKIQKKGIELTREEKLEPPQAMNALMKLNQLKPGLQYKLVSQTGPVHAPIFTMSVEIDGSTFEASGPSKKTAKLHVAVKVLQDMGLPTGVEGKDSGKGDESAEETETKPVVVAPPPVVETVSTPTAASPPSDQTPENVKQQGPILTKHGKNPVMELNEKRRGLKYELISETGGSHDKRFVMEVEVDGQKFQGAGSNKKVAKAYAALAALEKLFPDAPVAIEQNKKKRAPVPARGGPKFPVKQHNPGFGMGGGPMHNEAPPPPNMRGRGRGGNMRGRGRGRGGFGGNHGGYMNTGAGYGNYGYGGNSATAGYSQFYSNGGHSNSGGGGGGGGGGGGSSGYGSYYQGGDGYTAPAPPKHGGKKQQHGGGQKASYGSGYASHQGQQSYGQGQYGSYGPGQGKQKGYGHGQGGYSYSNSYNSPGGGSDYNYESKYSYSGNSGRGGGGNNYSGGGSYNSGSHGGYGGSGGGGSSYQGGYSSQSNYNSPGSQNYSGPPSSYQASQGGYGRNEHSMSYQYR
SIO_010081: ILF3
subclass of: SO_0000673
so part of: ILF3
location: join(255081..255083,255175..255401,255629..255809,256375..256522,257846..257937,258467..258562,260238..260349,260628..260725,261161..261272,261365..261493,262137..262336,262541..262711,262870..263007,263267..263443,264012..264168,264630..264683,267202..267561,268027..268146,268253..268383)
location: region:255081-268383:1
so has part: feature:255081-255083:1:exon
so has part: feature:255175-255401:1:exon
so has part: feature:255629-255809:1:exon
so has part: feature:256375-256522:1:exon
so has part: feature:257846-257937:1:exon
so has part: feature:258467-258562:1:exon
so has part: feature:260238-260349:1:exon
so has part: feature:260628-260725:1:exon
so has part: feature:261161-261272:1:exon
so has part: feature:261365-261493:1:exon
so has part: feature:262137-262336:1:exon
so has part: feature:262541-262711:1:exon
so has part: feature:262870-263007:1:exon
so has part: feature:263267-263443:1:exon
so has part: feature:264012-264168:1:exon
so has part: feature:264630-264683:1:exon
so has part: feature:267202-267561:1:exon
so has part: feature:268027-268146:1:exon
so has part: feature:268253-268383:1:exon

XP_030115869.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:255081-255083:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:255175-255401:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:255629-255809:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:256375-256522:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:257846-257937:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:258467-258562:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:260238-260349:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:260628-260725:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:261161-261272:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:261365-261493:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:262137-262336:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:262541-262711:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:262870-263007:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:263267-263443:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:264012-264168:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:264630-264683:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:267202-267561:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:268027-268146:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:268253-268383:1:exon

ILF3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: ILF3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin enhancer-binding factor 3 isoform X2
translation: MRPMRIFVNDDRHVMAKHSAVYPTQEELEAVQNMVSHTERALKAVSDWIDEQEKVSGEQPETESMETAAEEENKEGGDQKATEQLTRTLRGVMRVGLVAKGLLLKGDLDLELVLLCKDKPTAKLLEKVADNLGVQLAAITEDKYEIIQSVGDAAIVIKNTKEPPLSLTIHLTSPVVREELEKQLAGETLSVTDSPDVLDRQKCLAALASLRHAKWFQARANGLKSCVIVIRVLRDLCTRVPTWAPLRGWPLELLCEKSIGTANRPMGAGEALRRVLECLASGIVMPDGSGIYDPCEKEATDAIGHLDRQQREDITQSAQHALRLAAFGQLHKVLGMDPLPSKMPKKPKNENPVDYTVQIPPSTTYAVTPMKRPMEEDGEEKSPSKKKKKIQKKGIELTREEKLEPPQAMNALMKLNQLKPGLQYKLVSQTGPVHAPIFTMSVEIDGSTFEASGPSKKTAKLHVAVKVLQDMGLPTGVEGKDSGKGDESAEETETKPVVVAPPPVVETVSTPTAASPPSDQTPENVKQQGPILTKHGKNPVMELNEKRRGLKYELISETGGSHDKRFVMEVEVDGQKFQGAGSNKKVAKAYAALAALEKLFPDAPVAIEQNKKKRAPVPARGGPKFPVKHNPGFGMGGGPMHNEAPPPPNMRGRGRGGNMRGRGRGRGGFGGNHGGYMNTGAGYGNYGYGGNSATAGYSQFYSNGGHSNSGGGGGGGGGGGGSSGYGSYYQGGDGYTAPAPPKHGGKKQQHGGGQKASYGSGYASHQGQQSYGQGQYGSYGPGQGKQKGYGHGQGGYSYSNSYNSPGGGSDYNYESKYSYSGNSGRGGGGNNYSGGGSYNSGSHGGYGGSGGGGSSYQGKAGGYSSQSNYNSPGSQNYSGPPSSYQASQGGYGRNEHSMSYQYR
SIO_010081: ILF3
subclass of: SO_0000673
so part of: ILF3
location: join(255081..255083,255175..255401,255629..255809,256375..256522,257846..257937,258467..258562,260238..260349,260628..260725,261161..261272,261365..261493,262137..262336,262541..262711,262870..263007,263267..263443,264015..264168,264630..264683,267202..267561,268027..268155,268253..268383)
location: region:255081-268383:1
so has part: feature:255081-255083:1:exon
so has part: feature:255175-255401:1:exon
so has part: feature:255629-255809:1:exon
so has part: feature:256375-256522:1:exon
so has part: feature:257846-257937:1:exon
so has part: feature:258467-258562:1:exon
so has part: feature:260238-260349:1:exon
so has part: feature:260628-260725:1:exon
so has part: feature:261161-261272:1:exon
so has part: feature:261365-261493:1:exon
so has part: feature:262137-262336:1:exon
so has part: feature:262541-262711:1:exon
so has part: feature:262870-263007:1:exon
so has part: feature:263267-263443:1:exon
so has part: feature:264015-264168:1:exon
so has part: feature:264630-264683:1:exon
so has part: feature:267202-267561:1:exon
so has part: feature:268027-268155:1:exon
so has part: feature:268253-268383:1:exon

XP_030115868.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:255081-255083:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:255175-255401:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:255629-255809:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:256375-256522:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:257846-257937:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:258467-258562:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:260238-260349:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:260628-260725:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:261161-261272:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:261365-261493:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:262137-262336:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:262541-262711:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:262870-263007:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:263267-263443:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:264015-264168:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:264630-264683:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:267202-267561:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:268027-268155:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:268253-268383:1:exon

ILF3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: ILF3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin enhancer-binding factor 3 isoform X4
translation: MRPMRIFVNDDRHVMAKHSAVYPTQEELEAVQNMVSHTERALKAVSDWIDEQEKVSGEQPETESMETAAEEENKEGGDQKATEQLTRTLRGVMRVGLVAKGLLLKGDLDLELVLLCKDKPTAKLLEKVADNLGVQLAAITEDKYEIIQSVGDAAIVIKNTKEPPLSLTIHLTSPVVREELEKQLAGETLSVTDSPDVLDRQKCLAALASLRHAKWFQARANGLKSCVIVIRVLRDLCTRVPTWAPLRGWPLELLCEKSIGTANRPMGAGEALRRVLECLASGIVMPDGSGIYDPCEKEATDAIGHLDRQQREDITQSAQHALRLAAFGQLHKVLGMDPLPSKMPKKPKNENPVDYTVQIPPSTTYAVTPMKRPMEEDGEEKSPSKKKKKIQKKEEKLEPPQAMNALMKLNQLKPGLQYKLVSQTGPVHAPIFTMSVEIDGSTFEASGPSKKTAKLHVAVKVLQDMGLPTGVEGKDSGKGDESAEETETKPVVVAPPPVVETVSTPTAASPPSDQTPENVKQQGPILTKHGKNPVMELNEKRRGLKYELISETGGSHDKRFVMEVEVDGQKFQGAGSNKKVAKAYAALAALEKLFPDAPVAIEQNKKKRAPVPARGGPKFPVKQHNPGFGMGGGPMHNEAPPPPNMRGRGRGGNMRGRGRGRGGFGGNHGGYMNTGAGYGNYGYGGNSATAGYSQFYSNGGHSNSGGGGGGGGGGGGSSGYGSYYQGGDGYTAPAPPKHGGKKQQHGGGQKASYGSGYASHQGQQSYGQGQYGSYGPGQGKQKGYGHGQGGYSYSNSYNSPGGGSDYNYESKYSYSGNSGRGGGGNNYSGGGSYNSGSHGGYGGSGGGGSSYQGKAGGYSSQSNYNSPGSQNYSGPPSSYQASQGGYGRNEHSMSYQYR
SIO_010081: ILF3
subclass of: SO_0000673
so part of: ILF3
location: join(255081..255083,255175..255401,255629..255809,256375..256522,257846..257937,258467..258562,260238..260349,260628..260725,261161..261272,261365..261475,262137..262336,262541..262711,262870..263007,263267..263443,264012..264168,264630..264683,267202..267561,268027..268155,268253..268383)
location: region:255081-268383:1
so has part: feature:255081-255083:1:exon
so has part: feature:255175-255401:1:exon
so has part: feature:255629-255809:1:exon
so has part: feature:256375-256522:1:exon
so has part: feature:257846-257937:1:exon
so has part: feature:258467-258562:1:exon
so has part: feature:260238-260349:1:exon
so has part: feature:260628-260725:1:exon
so has part: feature:261161-261272:1:exon
so has part: feature:261365-261475:1:exon
so has part: feature:262137-262336:1:exon
so has part: feature:262541-262711:1:exon
so has part: feature:262870-263007:1:exon
so has part: feature:263267-263443:1:exon
so has part: feature:264012-264168:1:exon
so has part: feature:264630-264683:1:exon
so has part: feature:267202-267561:1:exon
so has part: feature:268027-268155:1:exon
so has part: feature:268253-268383:1:exon

XP_030115870.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:255081-255083:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:255175-255401:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:255629-255809:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:256375-256522:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:257846-257937:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:258467-258562:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:260238-260349:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:260628-260725:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:261161-261272:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:261365-261475:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:262137-262336:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:262541-262711:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:262870-263007:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:263267-263443:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:264012-264168:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:264630-264683:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:267202-267561:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:268027-268155:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:268253-268383:1:exon

ILF3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: ILF3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin enhancer-binding factor 3 isoform X5
translation: MRPMRIFVNDDRHVMAKHSAVYPTQEELEAVQNMVSHTERALKAVSDWIDEQEKVSGEQPETESMETAAEEENKEGGDQKATEQLTRTLRGVMRVGLVAKGLLLKGDLDLELVLLCKDKPTAKLLEKVADNLGVQLAAITEDKYEIIQSVGDAAIVIKNTKEPPLSLTIHLTSPVVREELEKQLAGETLSVTDSPDVLDRQKCLAALASLRHAKWFQARANGLKSCVIVIRVLRDLCTRVPTWAPLRGWPLELLCEKSIGTANRPMGAGEALRRVLECLASGIVMPDGSGIYDPCEKEATDAIGHLDRQQREDITQSAQHALRLAAFGQLHKVLGMDPLPSKMPKKPKNENPVDYTVQIPPSTTYAVTPMKRPMEEDGEEKSPSKKKKKIQKKEEKLEPPQAMNALMKLNQLKPGLQYKLVSQTGPVHAPIFTMSVEIDGSTFEASGPSKKTAKLHVAVKVLQDMGLPTGVEGKDSGKGDESAEETETKPVVVAPPPVVETVSTPTAASPPSDQTPENVKQQGPILTKHGKNPVMELNEKRRGLKYELISETGGSHDKRFVMEVEVDGQKFQGAGSNKKVAKAYAALAALEKLFPDAPVAIEQNKKKRAPVPARGGPKFPVKHNPGFGMGGGPMHNEAPPPPNMRGRGRGGNMRGRGRGRGGFGGNHGGYMNTGAGYGNYGYGGNSATAGYSQFYSNGGHSNSGGGGGGGGGGGGSSGYGSYYQGGDGYTAPAPPKHGGKKQQHGGGQKASYGSGYASHQGQQSYGQGQYGSYGPGQGKQKGYGHGQGGYSYSNSYNSPGGGSDYNYESKYSYSGNSGRGGGGNNYSGGGSYNSGSHGGYGGSGGGGSSYQGKAGGYSSQSNYNSPGSQNYSGPPSSYQASQGGYGRNEHSMSYQYR
SIO_010081: ILF3
subclass of: SO_0000673
so part of: ILF3
location: join(255081..255083,255175..255401,255629..255809,256375..256522,257846..257937,258467..258562,260238..260349,260628..260725,261161..261272,261365..261475,262137..262336,262541..262711,262870..263007,263267..263443,264015..264168,264630..264683,267202..267561,268027..268155,268253..268383)
location: region:255081-268383:1
so has part: feature:255081-255083:1:exon
so has part: feature:255175-255401:1:exon
so has part: feature:255629-255809:1:exon
so has part: feature:256375-256522:1:exon
so has part: feature:257846-257937:1:exon
so has part: feature:258467-258562:1:exon
so has part: feature:260238-260349:1:exon
so has part: feature:260628-260725:1:exon
so has part: feature:261161-261272:1:exon
so has part: feature:261365-261475:1:exon
so has part: feature:262137-262336:1:exon
so has part: feature:262541-262711:1:exon
so has part: feature:262870-263007:1:exon
so has part: feature:263267-263443:1:exon
so has part: feature:264015-264168:1:exon
so has part: feature:264630-264683:1:exon
so has part: feature:267202-267561:1:exon
so has part: feature:268027-268155:1:exon
so has part: feature:268253-268383:1:exon

XP_030115871.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:255081-255083:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:255175-255401:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:255629-255809:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:256375-256522:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:257846-257937:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:258467-258562:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:260238-260349:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:260628-260725:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:261161-261272:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:261365-261475:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:262137-262336:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:262541-262711:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:262870-263007:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:263267-263443:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:264015-264168:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:264630-264683:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:267202-267561:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:268027-268155:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:268253-268383:1:exon

ILF3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: ILF3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin enhancer-binding factor 3 isoform X6
translation: MRPMRIFVNDDRHVMAKHSAVYPTQEELEAVQNMVSHTERALKAVSDWIDEQEKVSGEQPETESMETAAEEENKEGGDQKATEQLTRTLRGVMRVGLVAKGLLLKGDLDLELVLLCKDKPTAKLLEKVADNLGVQLAAITEDKYEIIQSVGDAAIVIKNTKEPPLSLTIHLTSPVVREELEKQLAGETLSVTDSPDVLDRQKCLAALASLRHAKWFQARANGLKSCVIVIRVLRDLCTRVPTWAPLRGWPLELLCEKSIGTANRPMGAGEALRRVLECLASGIVMPDGSGIYDPCEKEATDAIGHLDRQQREDITQSAQHALRLAAFGQLHKVLGMDPLPSKMPKKPKNENPVDYTVQIPPSTTYAVTPMKRPMEEDGEEKSPSKKKKKIQKKEEKLEPPQAMNALMKLNQLKPGLQYKLVSQTGPVHAPIFTMSVEIDGSTFEASGPSKKTAKLHVAVKVLQDMGLPTGVEGKDSGKGDESAEETETKPVVVAPPPVVETVSTPTAASPPSDQTPENVKQQGPILTKHGKNPVMELNEKRRGLKYELISETGGSHDKRFVMEVEVDGQKFQGAGSNKKVAKAYAALAALEKLFPDAPVAIEQNKKKRAPVPARGGPKFPVKHNPGFGMGGGPMHNEAPPPPNMRGRGRGGNMRGRGRGRGGFGGNHGGYMNTGAGYGNYGYGGNSATAGYSQFYSNGGHSNSGGGGGGGGGGGGSSGYGSYYQGGDGYTAPAPPKHGGKKQQHGGGQKASYGSGYASHQGQQSYGQGQYGSYGPGQGKQKGYGHGQGGYSYSNSYNSPGGGSDYNYESKYSYSGNSGRGGGGNNYSGGGSYNSGSHGGYGGSGGGGSSYQGGYSSQSNYNSPGSQNYSGPPSSYQASQGGYGRNEHSMSYQYR
SIO_010081: ILF3
subclass of: SO_0000673
so part of: ILF3
location: join(255081..255083,255175..255401,255629..255809,256375..256522,257846..257937,258467..258562,260238..260349,260628..260725,261161..261272,261365..261475,262137..262336,262541..262711,262870..263007,263267..263443,264015..264168,264630..264683,267202..267561,268027..268146,268253..268383)
location: region:255081-268383:1
so has part: feature:255081-255083:1:exon
so has part: feature:255175-255401:1:exon
so has part: feature:255629-255809:1:exon
so has part: feature:256375-256522:1:exon
so has part: feature:257846-257937:1:exon
so has part: feature:258467-258562:1:exon
so has part: feature:260238-260349:1:exon
so has part: feature:260628-260725:1:exon
so has part: feature:261161-261272:1:exon
so has part: feature:261365-261475:1:exon
so has part: feature:262137-262336:1:exon
so has part: feature:262541-262711:1:exon
so has part: feature:262870-263007:1:exon
so has part: feature:263267-263443:1:exon
so has part: feature:264015-264168:1:exon
so has part: feature:264630-264683:1:exon
so has part: feature:267202-267561:1:exon
so has part: feature:268027-268146:1:exon
so has part: feature:268253-268383:1:exon

XP_030115874.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:255081-255083:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:255175-255401:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:255629-255809:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:256375-256522:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:257846-257937:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:258467-258562:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:260238-260349:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:260628-260725:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:261161-261272:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:261365-261475:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:262137-262336:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:262541-262711:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:262870-263007:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:263267-263443:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:264015-264168:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:264630-264683:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:267202-267561:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:268027-268146:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:268253-268383:1:exon

LOC115491783
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC115491783
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(270067..273019)
location: region:270067-273019:-1
so has part: feature:270067-273019:-1:exon
subclass of: SO_0000010

115491783
type: Gene
SIO_000068: ncbigene

position:270067:-1
position: 270067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:273019:-1
position: 273019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:270067-273019:-1:exon

LOC115491783
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC115491783
product: beta-1,3-galactosyltransferase 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_030260205.3
SIO_010081: LOC115491783
subclass of: SO_0000673
so part of: LOC115491783
location: complement(join(270067..271161,272923..273019))
location: region:270067-273019:-1
so has part: feature:272923-273019:-1:exon
so has part: feature:270067-271161:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:272923-273019:-1:exon

position:272923:-1
position: 272923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:270067-271161:-1:exon

position:271161:-1
position: 271161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115491783
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC115491783
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-1,3-galactosyltransferase 2-like
translation: MKLPPSCRLLLLPVAAALTLLALQARHSAVPPPSTTAAPAPTPRPGNATEPPRPPRHPLQPPYPYPYRFLLNHPDKCRERAPFLVLLVVTSPADLAARDAVRRTWGDESAVPGLSVLRLFLLGLHPVFSAELRPVLQEEDALHGDLLQQDFLDTYNNLTLKTLMGLEWVSRFCPNASYVMKADHDVFLNLEYLAGLLRPPRSDFLTGYVYRWTGPLRNRAYKWFVPREVYPNDTYPPYCGGPAYVLSGDLALRVFGVAQTLPVINMEDAFVGICLHALGVAVTDPPPGAFTMYRLDYDRCRFSRLVMVHHYGPQELLRVWPHFRNASDKCP
SIO_010081: LOC115491783
subclass of: SO_0000673
so part of: LOC115491783
location: complement(270159..271154)
location: region:270159-271154:-1
so has part: feature:270159-271154:-1:exon

XP_030116065.2
type: Protein
SIO_000068: ncbiprotein

position:270159:-1
position: 270159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:271154:-1
position: 271154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:270159-271154:-1:exon

QTRT1
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: QTRT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(272941..278607)
location: region:272941-278607:-1
so has part: feature:272941-278607:-1:exon
subclass of: SO_0000010

115491767
type: Gene
SIO_000068: ncbigene

position:272941:-1
position: 272941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:278607:-1
position: 278607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:272941-278607:-1:exon

QTRT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: QTRT1
product: queuine tRNA-ribosyltransferase catalytic subunit 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_030260168.3
SIO_010081: QTRT1
subclass of: SO_0000673
so part of: QTRT1
location: complement(join(272941..273026,274410..274494,274585..274694,274786..274861,274939..275077,275749..275864,276448..276526,276599..276737,277404..277472,277837..278607))
location: region:272941-278607:-1
so has part: feature:277837-278607:-1:exon
so has part: feature:277404-277472:-1:exon
so has part: feature:276599-276737:-1:exon
so has part: feature:276448-276526:-1:exon
so has part: feature:275749-275864:-1:exon
so has part: feature:274939-275077:-1:exon
so has part: feature:274786-274861:-1:exon
so has part: feature:274585-274694:-1:exon
so has part: feature:274410-274494:-1:exon
so has part: feature:272941-273026:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:277837-278607:-1:exon

position:277837:-1
position: 277837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:277404-277472:-1:exon

position:277404:-1
position: 277404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:277472:-1
position: 277472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:276599-276737:-1:exon

position:276599:-1
position: 276599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:276737:-1
position: 276737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:276448-276526:-1:exon

position:276448:-1
position: 276448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:276526:-1
position: 276526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:275749-275864:-1:exon

position:275749:-1
position: 275749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:275864:-1
position: 275864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:274939-275077:-1:exon

position:274939:-1
position: 274939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:275077:-1
position: 275077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:274786-274861:-1:exon

position:274786:-1
position: 274786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:274861:-1
position: 274861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:274585-274694:-1:exon

position:274585:-1
position: 274585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:274694:-1
position: 274694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:274410-274494:-1:exon

position:274410:-1
position: 274410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:274494:-1
position: 274494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:272941-273026:-1:exon

position:273026:-1
position: 273026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

QTRT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: QTRT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: queuine tRNA-ribosyltransferase catalytic subunit 1 isoform X2
translation: MAAPAAGPPPVLRIVAECGRSRARAGELRLPHGTVPCPVFMPVGTRGTAKGLTAAQLAALGCRICLGNTFHLGTRPGPELVRRSGGLHGFMDWPHNLLTDSGGFQMVSLLELSEVSEEGVLFQPPHGGDPVLLSPERAMEIQNALGADIVMQLDDVVSSTTTGPRLEEAMLRSVRWLDRCVAAHARPQQQRLFAIVQGGTEPELRLRCLRAMTQRAVSGFAIGGLSGGEAKARFWRAVKLCTEHLPRDKPRYLMGVGYATDLVVCVALGCDMFDCVFPTRTARFGSALVPWGSLQLKNQKFAKDFRPIDADCGCPTCQRHSRAYLHALLRCNTAALHLLTLHNVAYQRRHRAAAGGILGALGRAGSGSWS
SIO_010081: QTRT1
subclass of: SO_0000673
so part of: QTRT1
location: complement(join(272955..273026,274410..274494,274585..274694,274786..274861,274939..275077,275749..275864,276448..276526,276599..276737,277404..277472,277837..278064))
location: region:272955-278064:-1
so has part: feature:277837-278064:-1:exon
so has part: feature:277404-277472:-1:exon
so has part: feature:276599-276737:-1:exon
so has part: feature:276448-276526:-1:exon
so has part: feature:275749-275864:-1:exon
so has part: feature:274939-275077:-1:exon
so has part: feature:274786-274861:-1:exon
so has part: feature:274585-274694:-1:exon
so has part: feature:274410-274494:-1:exon
so has part: feature:272955-273026:-1:exon

XP_030116028.3
type: Protein
SIO_000068: ncbiprotein

position:272955:-1
position: 272955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:278064:-1
position: 278064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:277837-278064:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:277404-277472:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:276599-276737:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:276448-276526:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:275749-275864:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:274939-275077:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:274786-274861:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:274585-274694:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:274410-274494:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:272955-273026:-1:exon

QTRT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: QTRT1
product: queuine tRNA-ribosyltransferase catalytic subunit 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 80 samples with support for all annotated introns
transcript id: XM_030260167.3
SIO_010081: QTRT1
subclass of: SO_0000673
so part of: QTRT1
location: complement(join(273630..274317,274410..274494,274585..274694,274786..274861,274939..275077,275749..275864,276448..276526,276599..276737,277404..277472,277837..278597))
location: region:273630-278597:-1
so has part: feature:277837-278597:-1:exon
so has part: feature:277404-277472:-1:exon
so has part: feature:276599-276737:-1:exon
so has part: feature:276448-276526:-1:exon
so has part: feature:275749-275864:-1:exon
so has part: feature:274939-275077:-1:exon
so has part: feature:274786-274861:-1:exon
so has part: feature:274585-274694:-1:exon
so has part: feature:274410-274494:-1:exon
so has part: feature:273630-274317:-1:exon

position:273630:-1
position: 273630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:278597:-1
position: 278597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:277837-278597:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:277404-277472:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:276599-276737:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:276448-276526:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:275749-275864:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:274939-275077:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:274786-274861:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:274585-274694:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:274410-274494:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:273630-274317:-1:exon

position:274317:-1
position: 274317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

QTRT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: QTRT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: queuine tRNA-ribosyltransferase catalytic subunit 1 isoform X1
translation: MAAPAAGPPPVLRIVAECGRSRARAGELRLPHGTVPCPVFMPVGTRGTAKGLTAAQLAALGCRICLGNTFHLGTRPGPELVRRSGGLHGFMDWPHNLLTDSGGFQMVSLLELSEVSEEGVLFQPPHGGDPVLLSPERAMEIQNALGADIVMQLDDVVSSTTTGPRLEEAMLRSVRWLDRCVAAHARPQQQRLFAIVQGGTEPELRLRCLRAMTQRAVSGFAIGGLSGGEAKARFWRAVKLCTEHLPRDKPRYLMGVGYATDLVVCVALGCDMFDCVFPTRTARFGSALVPWGSLQLKNQKFAKDFRPIDADCGCPTCQRHSRAYLHALLRCNTAALHLLTLHNVAYQMKLMGSIRDSILRQRFPEFVREFMAAMYGGRGGPPAWAREALESVGITLG
SIO_010081: QTRT1
subclass of: SO_0000673
so part of: QTRT1
location: complement(join(274165..274317,274410..274494,274585..274694,274786..274861,274939..275077,275749..275864,276448..276526,276599..276737,277404..277472,277837..278064))
location: region:274165-278064:-1
so has part: feature:277837-278064:-1:exon
so has part: feature:277404-277472:-1:exon
so has part: feature:276599-276737:-1:exon
so has part: feature:276448-276526:-1:exon
so has part: feature:275749-275864:-1:exon
so has part: feature:274939-275077:-1:exon
so has part: feature:274786-274861:-1:exon
so has part: feature:274585-274694:-1:exon
so has part: feature:274410-274494:-1:exon
so has part: feature:274165-274317:-1:exon

XP_030116027.3
type: Protein
SIO_000068: ncbiprotein

position:274165:-1
position: 274165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:277837-278064:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:277404-277472:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:276599-276737:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:276448-276526:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:275749-275864:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:274939-275077:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:274786-274861:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:274585-274694:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:274410-274494:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:274165-274317:-1:exon

DNM2
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: DNM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 278776..298642
location: region:278776-298642:1
so has part: feature:278776-298642:1:exon
subclass of: SO_0000010

100219487
type: Gene
SIO_000068: ncbigene

position:278776:1
position: 278776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:298642:1
position: 298642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:278776-298642:1:exon

DNM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: DNM2
product: dynamin 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_032745606.2
SIO_010081: DNM2
subclass of: SO_0000673
so part of: DNM2
location: join(278776..279038,283256..283329,284581..284730,284876..285079,285226..285324,285792..285952,286081..286223,286489..286624,287010..287077,287809..287947,288990..289076,289151..289221,289760..289789,290894..290945,291448..291459,293602..293715,294219..294328,294482..294593,295091..295255,296150..296382,297080..297325,297892..298642)
location: region:278776-298642:1
so has part: feature:278776-279038:1:exon
so has part: feature:283256-283329:1:exon
so has part: feature:284581-284730:1:exon
so has part: feature:284876-285079:1:exon
so has part: feature:285226-285324:1:exon
so has part: feature:285792-285952:1:exon
so has part: feature:286081-286223:1:exon
so has part: feature:286489-286624:1:exon
so has part: feature:287010-287077:1:exon
so has part: feature:287809-287947:1:exon
so has part: feature:288990-289076:1:exon
so has part: feature:289151-289221:1:exon
so has part: feature:289760-289789:1:exon
so has part: feature:290894-290945:1:exon
so has part: feature:291448-291459:1:exon
so has part: feature:293602-293715:1:exon
so has part: feature:294219-294328:1:exon
so has part: feature:294482-294593:1:exon
so has part: feature:295091-295255:1:exon
so has part: feature:296150-296382:1:exon
so has part: feature:297080-297325:1:exon
so has part: feature:297892-298642:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:278776-279038:1:exon

position:279038:1
position: 279038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:283256-283329:1:exon

position:283256:1
position: 283256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:283329:1
position: 283329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:284581-284730:1:exon

position:284581:1
position: 284581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:284730:1
position: 284730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:284876-285079:1:exon

position:284876:1
position: 284876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:285079:1
position: 285079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:285226-285324:1:exon

position:285226:1
position: 285226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:285324:1
position: 285324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:285792-285952:1:exon

position:285792:1
position: 285792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:285952:1
position: 285952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:286081-286223:1:exon

position:286081:1
position: 286081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:286223:1
position: 286223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:286489-286624:1:exon

position:286489:1
position: 286489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:286624:1
position: 286624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:287010-287077:1:exon

position:287010:1
position: 287010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:287077:1
position: 287077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:287809-287947:1:exon

position:287809:1
position: 287809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:287947:1
position: 287947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:288990-289076:1:exon

position:288990:1
position: 288990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:289076:1
position: 289076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:289151-289221:1:exon

position:289151:1
position: 289151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:289221:1
position: 289221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:289760-289789:1:exon

position:289760:1
position: 289760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:289789:1
position: 289789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:290894-290945:1:exon

position:290894:1
position: 290894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:290945:1
position: 290945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:291448-291459:1:exon

position:291448:1
position: 291448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:291459:1
position: 291459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:293602-293715:1:exon

position:293602:1
position: 293602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:293715:1
position: 293715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:294219-294328:1:exon

position:294219:1
position: 294219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:294328:1
position: 294328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:294482-294593:1:exon

position:294482:1
position: 294482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:294593:1
position: 294593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:295091-295255:1:exon

position:295091:1
position: 295091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:295255:1
position: 295255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:296150-296382:1:exon

position:296150:1
position: 296150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:296382:1
position: 296382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:297080-297325:1:exon

position:297080:1
position: 297080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:297325:1
position: 297325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:297892-298642:1:exon

position:297892:1
position: 297892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DNM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: DNM2
product: dynamin 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_032745607.2
SIO_010081: DNM2
subclass of: SO_0000673
so part of: DNM2
location: join(278776..279038,283256..283329,284581..284730,284876..285079,285226..285324,285792..285952,286081..286223,286489..286624,287010..287077,287809..287947,288990..289076,289151..289221,289760..289789,290894..290945,293602..293715,294219..294328,294482..294593,295091..295255,296150..296382,297080..297325,297892..298642)
location: region:278776-298642:1
so has part: feature:278776-279038:1:exon
so has part: feature:283256-283329:1:exon
so has part: feature:284581-284730:1:exon
so has part: feature:284876-285079:1:exon
so has part: feature:285226-285324:1:exon
so has part: feature:285792-285952:1:exon
so has part: feature:286081-286223:1:exon
so has part: feature:286489-286624:1:exon
so has part: feature:287010-287077:1:exon
so has part: feature:287809-287947:1:exon
so has part: feature:288990-289076:1:exon
so has part: feature:289151-289221:1:exon
so has part: feature:289760-289789:1:exon
so has part: feature:290894-290945:1:exon
so has part: feature:293602-293715:1:exon
so has part: feature:294219-294328:1:exon
so has part: feature:294482-294593:1:exon
so has part: feature:295091-295255:1:exon
so has part: feature:296150-296382:1:exon
so has part: feature:297080-297325:1:exon
so has part: feature:297892-298642:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:278776-279038:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:283256-283329:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:284581-284730:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:284876-285079:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:285226-285324:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:285792-285952:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:286081-286223:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:286489-286624:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:287010-287077:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:287809-287947:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:288990-289076:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:289151-289221:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:289760-289789:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:290894-290945:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:293602-293715:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:294219-294328:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:294482-294593:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:295091-295255:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:296150-296382:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:297080-297325:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:297892-298642:1:exon

DNM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: DNM2
product: dynamin 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_032745608.2
SIO_010081: DNM2
subclass of: SO_0000673
so part of: DNM2
location: join(278776..279038,283256..283329,284581..284730,284876..285079,285226..285324,285792..285952,286081..286223,286489..286624,287010..287077,287809..287947,288990..289076,289151..289221,290894..290945,291448..291459,293602..293715,294219..294328,294482..294593,295091..295255,296150..296382,297080..297325,297892..298642)
location: region:278776-298642:1
so has part: feature:278776-279038:1:exon
so has part: feature:283256-283329:1:exon
so has part: feature:284581-284730:1:exon
so has part: feature:284876-285079:1:exon
so has part: feature:285226-285324:1:exon
so has part: feature:285792-285952:1:exon
so has part: feature:286081-286223:1:exon
so has part: feature:286489-286624:1:exon
so has part: feature:287010-287077:1:exon
so has part: feature:287809-287947:1:exon
so has part: feature:288990-289076:1:exon
so has part: feature:289151-289221:1:exon
so has part: feature:290894-290945:1:exon
so has part: feature:291448-291459:1:exon
so has part: feature:293602-293715:1:exon
so has part: feature:294219-294328:1:exon
so has part: feature:294482-294593:1:exon
so has part: feature:295091-295255:1:exon
so has part: feature:296150-296382:1:exon
so has part: feature:297080-297325:1:exon
so has part: feature:297892-298642:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:278776-279038:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:283256-283329:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:284581-284730:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:284876-285079:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:285226-285324:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:285792-285952:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:286081-286223:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:286489-286624:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:287010-287077:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:287809-287947:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:288990-289076:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:289151-289221:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:290894-290945:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:291448-291459:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:293602-293715:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:294219-294328:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:294482-294593:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:295091-295255:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:296150-296382:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:297080-297325:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:297892-298642:1:exon

DNM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: DNM2
product: dynamin 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_032745609.2
SIO_010081: DNM2
subclass of: SO_0000673
so part of: DNM2
location: join(278776..279038,283256..283329,284581..284730,284876..285079,285226..285324,285792..285952,286081..286223,286489..286624,287010..287077,287809..287947,288990..289076,289151..289221,290894..290945,293602..293715,294219..294328,294482..294593,295091..295255,296150..296382,297080..297325,297892..298642)
location: region:278776-298642:1
so has part: feature:278776-279038:1:exon
so has part: feature:283256-283329:1:exon
so has part: feature:284581-284730:1:exon
so has part: feature:284876-285079:1:exon
so has part: feature:285226-285324:1:exon
so has part: feature:285792-285952:1:exon
so has part: feature:286081-286223:1:exon
so has part: feature:286489-286624:1:exon
so has part: feature:287010-287077:1:exon
so has part: feature:287809-287947:1:exon
so has part: feature:288990-289076:1:exon
so has part: feature:289151-289221:1:exon
so has part: feature:290894-290945:1:exon
so has part: feature:293602-293715:1:exon
so has part: feature:294219-294328:1:exon
so has part: feature:294482-294593:1:exon
so has part: feature:295091-295255:1:exon
so has part: feature:296150-296382:1:exon
so has part: feature:297080-297325:1:exon
so has part: feature:297892-298642:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:278776-279038:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:283256-283329:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:284581-284730:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:284876-285079:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:285226-285324:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:285792-285952:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:286081-286223:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:286489-286624:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:287010-287077:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:287809-287947:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:288990-289076:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:289151-289221:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:290894-290945:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:293602-293715:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:294219-294328:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:294482-294593:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:295091-295255:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:296150-296382:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:297080-297325:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:297892-298642:1:exon

DNM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: DNM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dynamin-2 isoform X1
translation: MGNRGMEELIPLVNKLQDAFSSIGQSCHLDLPQIAVVGGQSAGKSSVLENFVGRDFLPRGSGIVTRRPLILQLIFSKTEYAEFLHCKSKKFTDFDEVRQEIEAETDRVTGTNKGISPVPINLRVYSPHVLNLTLIDLPGITKVPVGDQPQDIEFQIRDMILQFISRESSLILAVTPANMDLANSDALKMAKEVDPQGLRTIGVITKLDLMDEGTDARDVLENKLLPLRRGYIGVVNRSQKDIDGKKDIRAALAAERKFFLSHPAYRHMAERMGTPHLQRVLNQQLTNHIRETLPSLRSKLQSQLLSLEKEVEEYKNFRPDDPARKTKALLQMVQQFGVDFEKRIEGSGDQVDTLELSGGARINRIFHERFPFELVKMEFDEKDLRREISYAIKNIHGVRTGLFTPDLAFEAIVKKQVVKLKEPCLKCVDLVIQELINTVRQCTSKLGSYPRLREETERIVTTHIREREGKTKDQILLLIDIELSYINTNHEDFIGFANCFTEQHVATGAQQRNTQTNKKRAIPNQGEILVIRRGWLTINNISIMKGGSKEYWFVLTAESLSWYKDEEEKEKKYMLPLDNLKIRDVEKGFMSTKHIFAIFNTEQRNVYKDLRQIELACDSQEDVDSWKASFLRAGVYPEKDQTESEDGAQENTFSMDPQLERQVETIRNLVDSYVGIINKSIRDLMPKTIMHLMINNTKDFIHSELLAFLYSSSDQSSLMEESAEQAQRRDEMLRMYHALKEALAIIGDISTSTVSTPVPPPVDDTWLQPAAGHSPPPQRRPPSALLPPGRPPSLRAPAPGPPLLPLPGGAPPAFAAPPIPSRLGPFAAASDPFSAPPQIPARPARIPPGIPPGVPRRPPAAPSRPTIIRPAEPSLLD
SIO_010081: DNM2
subclass of: SO_0000673
so part of: DNM2
location: join(278878..279038,283256..283329,284581..284730,284876..285079,285226..285324,285792..285952,286081..286223,286489..286624,287010..287077,287809..287947,288990..289076,289151..289221,289760..289789,290894..290945,291448..291459,293602..293715,294219..294328,294482..294593,295091..295255,296150..296382,297080..297325,297892..297958)
location: region:278878-297958:1
so has part: feature:278878-279038:1:exon
so has part: feature:283256-283329:1:exon
so has part: feature:284581-284730:1:exon
so has part: feature:284876-285079:1:exon
so has part: feature:285226-285324:1:exon
so has part: feature:285792-285952:1:exon
so has part: feature:286081-286223:1:exon
so has part: feature:286489-286624:1:exon
so has part: feature:287010-287077:1:exon
so has part: feature:287809-287947:1:exon
so has part: feature:288990-289076:1:exon
so has part: feature:289151-289221:1:exon
so has part: feature:289760-289789:1:exon
so has part: feature:290894-290945:1:exon
so has part: feature:291448-291459:1:exon
so has part: feature:293602-293715:1:exon
so has part: feature:294219-294328:1:exon
so has part: feature:294482-294593:1:exon
so has part: feature:295091-295255:1:exon
so has part: feature:296150-296382:1:exon
so has part: feature:297080-297325:1:exon
so has part: feature:297892-297958:1:exon

XP_032601497.1
type: Protein
SIO_000068: ncbiprotein

position:278878:1
position: 278878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:297958:1
position: 297958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:278878-279038:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:283256-283329:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:284581-284730:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:284876-285079:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:285226-285324:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:285792-285952:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:286081-286223:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:286489-286624:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:287010-287077:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:287809-287947:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:288990-289076:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:289151-289221:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:289760-289789:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:290894-290945:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:291448-291459:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:293602-293715:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:294219-294328:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:294482-294593:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:295091-295255:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:296150-296382:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:297080-297325:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:297892-297958:1:exon

DNM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: DNM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dynamin-2 isoform X2
translation: MGNRGMEELIPLVNKLQDAFSSIGQSCHLDLPQIAVVGGQSAGKSSVLENFVGRDFLPRGSGIVTRRPLILQLIFSKTEYAEFLHCKSKKFTDFDEVRQEIEAETDRVTGTNKGISPVPINLRVYSPHVLNLTLIDLPGITKVPVGDQPQDIEFQIRDMILQFISRESSLILAVTPANMDLANSDALKMAKEVDPQGLRTIGVITKLDLMDEGTDARDVLENKLLPLRRGYIGVVNRSQKDIDGKKDIRAALAAERKFFLSHPAYRHMAERMGTPHLQRVLNQQLTNHIRETLPSLRSKLQSQLLSLEKEVEEYKNFRPDDPARKTKALLQMVQQFGVDFEKRIEGSGDQVDTLELSGGARINRIFHERFPFELVKMEFDEKDLRREISYAIKNIHGVRTGLFTPDLAFEAIVKKQVVKLKEPCLKCVDLVIQELINTVRQCTSKLGSYPRLREETERIVTTHIREREGKTKDQILLLIDIELSYINTNHEDFIGFANCFTEQHVATGAQQRNTQTNKKRAIPNQVIRRGWLTINNISIMKGGSKEYWFVLTAESLSWYKDEEEKEKKYMLPLDNLKIRDVEKGFMSTKHIFAIFNTEQRNVYKDLRQIELACDSQEDVDSWKASFLRAGVYPEKDQTESEDGAQENTFSMDPQLERQVETIRNLVDSYVGIINKSIRDLMPKTIMHLMINNTKDFIHSELLAFLYSSSDQSSLMEESAEQAQRRDEMLRMYHALKEALAIIGDISTSTVSTPVPPPVDDTWLQPAAGHSPPPQRRPPSALLPPGRPPSLRAPAPGPPLLPLPGGAPPAFAAPPIPSRLGPFAAASDPFSAPPQIPARPARIPPGIPPGVPRRPPAAPSRPTIIRPAEPSLLD
SIO_010081: DNM2
subclass of: SO_0000673
so part of: DNM2
location: join(278878..279038,283256..283329,284581..284730,284876..285079,285226..285324,285792..285952,286081..286223,286489..286624,287010..287077,287809..287947,288990..289076,289151..289221,289760..289789,290894..290945,293602..293715,294219..294328,294482..294593,295091..295255,296150..296382,297080..297325,297892..297958)
location: region:278878-297958:1
so has part: feature:278878-279038:1:exon
so has part: feature:283256-283329:1:exon
so has part: feature:284581-284730:1:exon
so has part: feature:284876-285079:1:exon
so has part: feature:285226-285324:1:exon
so has part: feature:285792-285952:1:exon
so has part: feature:286081-286223:1:exon
so has part: feature:286489-286624:1:exon
so has part: feature:287010-287077:1:exon
so has part: feature:287809-287947:1:exon
so has part: feature:288990-289076:1:exon
so has part: feature:289151-289221:1:exon
so has part: feature:289760-289789:1:exon
so has part: feature:290894-290945:1:exon
so has part: feature:293602-293715:1:exon
so has part: feature:294219-294328:1:exon
so has part: feature:294482-294593:1:exon
so has part: feature:295091-295255:1:exon
so has part: feature:296150-296382:1:exon
so has part: feature:297080-297325:1:exon
so has part: feature:297892-297958:1:exon

XP_032601498.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:278878-279038:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:283256-283329:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:284581-284730:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:284876-285079:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:285226-285324:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:285792-285952:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:286081-286223:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:286489-286624:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:287010-287077:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:287809-287947:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:288990-289076:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:289151-289221:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:289760-289789:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:290894-290945:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:293602-293715:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:294219-294328:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:294482-294593:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:295091-295255:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:296150-296382:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:297080-297325:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:297892-297958:1:exon

DNM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: DNM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dynamin-2 isoform X3
translation: MGNRGMEELIPLVNKLQDAFSSIGQSCHLDLPQIAVVGGQSAGKSSVLENFVGRDFLPRGSGIVTRRPLILQLIFSKTEYAEFLHCKSKKFTDFDEVRQEIEAETDRVTGTNKGISPVPINLRVYSPHVLNLTLIDLPGITKVPVGDQPQDIEFQIRDMILQFISRESSLILAVTPANMDLANSDALKMAKEVDPQGLRTIGVITKLDLMDEGTDARDVLENKLLPLRRGYIGVVNRSQKDIDGKKDIRAALAAERKFFLSHPAYRHMAERMGTPHLQRVLNQQLTNHIRETLPSLRSKLQSQLLSLEKEVEEYKNFRPDDPARKTKALLQMVQQFGVDFEKRIEGSGDQVDTLELSGGARINRIFHERFPFELVKMEFDEKDLRREISYAIKNIHGVRTGLFTPDLAFEAIVKKQVVKLKEPCLKCVDLVIQELINTVRQCTSKLGSYPRLREETERIVTTHIREREGKTKDQILLLIDIELSYINTNHEDFIGFANAQQRNTQTNKKRAIPNQGEILVIRRGWLTINNISIMKGGSKEYWFVLTAESLSWYKDEEEKEKKYMLPLDNLKIRDVEKGFMSTKHIFAIFNTEQRNVYKDLRQIELACDSQEDVDSWKASFLRAGVYPEKDQTESEDGAQENTFSMDPQLERQVETIRNLVDSYVGIINKSIRDLMPKTIMHLMINNTKDFIHSELLAFLYSSSDQSSLMEESAEQAQRRDEMLRMYHALKEALAIIGDISTSTVSTPVPPPVDDTWLQPAAGHSPPPQRRPPSALLPPGRPPSLRAPAPGPPLLPLPGGAPPAFAAPPIPSRLGPFAAASDPFSAPPQIPARPARIPPGIPPGVPRRPPAAPSRPTIIRPAEPSLLD
SIO_010081: DNM2
subclass of: SO_0000673
so part of: DNM2
location: join(278878..279038,283256..283329,284581..284730,284876..285079,285226..285324,285792..285952,286081..286223,286489..286624,287010..287077,287809..287947,288990..289076,289151..289221,290894..290945,291448..291459,293602..293715,294219..294328,294482..294593,295091..295255,296150..296382,297080..297325,297892..297958)
location: region:278878-297958:1
so has part: feature:278878-279038:1:exon
so has part: feature:283256-283329:1:exon
so has part: feature:284581-284730:1:exon
so has part: feature:284876-285079:1:exon
so has part: feature:285226-285324:1:exon
so has part: feature:285792-285952:1:exon
so has part: feature:286081-286223:1:exon
so has part: feature:286489-286624:1:exon
so has part: feature:287010-287077:1:exon
so has part: feature:287809-287947:1:exon
so has part: feature:288990-289076:1:exon
so has part: feature:289151-289221:1:exon
so has part: feature:290894-290945:1:exon
so has part: feature:291448-291459:1:exon
so has part: feature:293602-293715:1:exon
so has part: feature:294219-294328:1:exon
so has part: feature:294482-294593:1:exon
so has part: feature:295091-295255:1:exon
so has part: feature:296150-296382:1:exon
so has part: feature:297080-297325:1:exon
so has part: feature:297892-297958:1:exon

XP_032601499.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:278878-279038:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:283256-283329:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:284581-284730:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:284876-285079:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:285226-285324:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:285792-285952:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:286081-286223:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:286489-286624:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:287010-287077:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:287809-287947:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:288990-289076:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:289151-289221:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:290894-290945:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:291448-291459:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:293602-293715:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:294219-294328:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:294482-294593:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:295091-295255:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:296150-296382:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:297080-297325:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:297892-297958:1:exon

DNM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: DNM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dynamin-2 isoform X4
translation: MGNRGMEELIPLVNKLQDAFSSIGQSCHLDLPQIAVVGGQSAGKSSVLENFVGRDFLPRGSGIVTRRPLILQLIFSKTEYAEFLHCKSKKFTDFDEVRQEIEAETDRVTGTNKGISPVPINLRVYSPHVLNLTLIDLPGITKVPVGDQPQDIEFQIRDMILQFISRESSLILAVTPANMDLANSDALKMAKEVDPQGLRTIGVITKLDLMDEGTDARDVLENKLLPLRRGYIGVVNRSQKDIDGKKDIRAALAAERKFFLSHPAYRHMAERMGTPHLQRVLNQQLTNHIRETLPSLRSKLQSQLLSLEKEVEEYKNFRPDDPARKTKALLQMVQQFGVDFEKRIEGSGDQVDTLELSGGARINRIFHERFPFELVKMEFDEKDLRREISYAIKNIHGVRTGLFTPDLAFEAIVKKQVVKLKEPCLKCVDLVIQELINTVRQCTSKLGSYPRLREETERIVTTHIREREGKTKDQILLLIDIELSYINTNHEDFIGFANAQQRNTQTNKKRAIPNQVIRRGWLTINNISIMKGGSKEYWFVLTAESLSWYKDEEEKEKKYMLPLDNLKIRDVEKGFMSTKHIFAIFNTEQRNVYKDLRQIELACDSQEDVDSWKASFLRAGVYPEKDQTESEDGAQENTFSMDPQLERQVETIRNLVDSYVGIINKSIRDLMPKTIMHLMINNTKDFIHSELLAFLYSSSDQSSLMEESAEQAQRRDEMLRMYHALKEALAIIGDISTSTVSTPVPPPVDDTWLQPAAGHSPPPQRRPPSALLPPGRPPSLRAPAPGPPLLPLPGGAPPAFAAPPIPSRLGPFAAASDPFSAPPQIPARPARIPPGIPPGVPRRPPAAPSRPTIIRPAEPSLLD
SIO_010081: DNM2
subclass of: SO_0000673
so part of: DNM2
location: join(278878..279038,283256..283329,284581..284730,284876..285079,285226..285324,285792..285952,286081..286223,286489..286624,287010..287077,287809..287947,288990..289076,289151..289221,290894..290945,293602..293715,294219..294328,294482..294593,295091..295255,296150..296382,297080..297325,297892..297958)
location: region:278878-297958:1
so has part: feature:278878-279038:1:exon
so has part: feature:283256-283329:1:exon
so has part: feature:284581-284730:1:exon
so has part: feature:284876-285079:1:exon
so has part: feature:285226-285324:1:exon
so has part: feature:285792-285952:1:exon
so has part: feature:286081-286223:1:exon
so has part: feature:286489-286624:1:exon
so has part: feature:287010-287077:1:exon
so has part: feature:287809-287947:1:exon
so has part: feature:288990-289076:1:exon
so has part: feature:289151-289221:1:exon
so has part: feature:290894-290945:1:exon
so has part: feature:293602-293715:1:exon
so has part: feature:294219-294328:1:exon
so has part: feature:294482-294593:1:exon
so has part: feature:295091-295255:1:exon
so has part: feature:296150-296382:1:exon
so has part: feature:297080-297325:1:exon
so has part: feature:297892-297958:1:exon

XP_032601500.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:278878-279038:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:283256-283329:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:284581-284730:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:284876-285079:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:285226-285324:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:285792-285952:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:286081-286223:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:286489-286624:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:287010-287077:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:287809-287947:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:288990-289076:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:289151-289221:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:290894-290945:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:293602-293715:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:294219-294328:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:294482-294593:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:295091-295255:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:296150-296382:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:297080-297325:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:297892-297958:1:exon

LOC115491799
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC115491799
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 300430..302069
location: region:300430-302069:1
so has part: feature:300430-302069:1:exon
subclass of: SO_0000010

115491799
type: Gene
SIO_000068: ncbigene

position:300430:1
position: 300430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:302069:1
position: 302069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:300430-302069:1:exon

LOC115491799
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC115491799
product: translation initiation factor IF-2-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_030260240.3
SIO_010081: LOC115491799
subclass of: SO_0000673
so part of: LOC115491799
location: join(300430..300881,300974..301174,301294..301380,301699..301742,301833..302069)
location: region:300430-302069:1
so has part: feature:300430-300881:1:exon
so has part: feature:300974-301174:1:exon
so has part: feature:301294-301380:1:exon
so has part: feature:301699-301742:1:exon
so has part: feature:301833-302069:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:300430-300881:1:exon

position:300881:1
position: 300881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:300974-301174:1:exon

position:300974:1
position: 300974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:301174:1
position: 301174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:301294-301380:1:exon

position:301294:1
position: 301294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:301380:1
position: 301380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:301699-301742:1:exon

position:301699:1
position: 301699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:301742:1
position: 301742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:301833-302069:1:exon

position:301833:1
position: 301833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115491799
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC115491799
product: translation initiation factor IF-2-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_041711832.1
SIO_010081: LOC115491799
subclass of: SO_0000673
so part of: LOC115491799
location: join(300430..300881,300974..301153,301294..301380,301699..301742,301833..302069)
location: region:300430-302069:1
so has part: feature:300430-300881:1:exon
so has part: feature:300974-301153:1:exon
so has part: feature:301294-301380:1:exon
so has part: feature:301699-301742:1:exon
so has part: feature:301833-302069:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:300430-300881:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:300974-301153:1:exon

position:301153:1
position: 301153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:301294-301380:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:301699-301742:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:301833-302069:1:exon

LOC115491799
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC115491799
product: translation initiation factor IF-2-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_030260242.3
SIO_010081: LOC115491799
subclass of: SO_0000673
so part of: LOC115491799
location: join(300430..300881,300974..301111,301294..301380,301699..301742,301833..302069)
location: region:300430-302069:1
so has part: feature:300430-300881:1:exon
so has part: feature:300974-301111:1:exon
so has part: feature:301294-301380:1:exon
so has part: feature:301699-301742:1:exon
so has part: feature:301833-302069:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:300430-300881:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:300974-301111:1:exon

position:301111:1
position: 301111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:301294-301380:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:301699-301742:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:301833-302069:1:exon

LOC115491799
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC115491799
product: translation initiation factor IF-2-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_041711833.1
SIO_010081: LOC115491799
subclass of: SO_0000673
so part of: LOC115491799
location: join(300430..300881,300974..301090,301294..301380,301699..301742,301833..302069)
location: region:300430-302069:1
so has part: feature:300430-300881:1:exon
so has part: feature:300974-301090:1:exon
so has part: feature:301294-301380:1:exon
so has part: feature:301699-301742:1:exon
so has part: feature:301833-302069:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:300430-300881:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:300974-301090:1:exon

position:301090:1
position: 301090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:301294-301380:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:301699-301742:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:301833-302069:1:exon

LOC115491799
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC115491799
product: translation initiation factor IF-2-like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_041711834.1
SIO_010081: LOC115491799
subclass of: SO_0000673
so part of: LOC115491799
location: join(300430..300881,300974..301048,301294..301380,301699..301742,301833..302069)
location: region:300430-302069:1
so has part: feature:300430-300881:1:exon
so has part: feature:300974-301048:1:exon
so has part: feature:301294-301380:1:exon
so has part: feature:301699-301742:1:exon
so has part: feature:301833-302069:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:300430-300881:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:300974-301048:1:exon

position:301048:1
position: 301048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:301294-301380:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:301699-301742:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:301833-302069:1:exon

LOC115491799
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC115491799
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: translation initiation factor IF-2-like isoform X1
translation: MRMRMGMRMRMRLEFLLLVVAAFASCWSQTGHDPSGDSRRDFGDSRRDSRRDPGPAAPRLLPPPLLLRLPPEPGPARIRCLAPRRFTGSTFELLRGVPPVPVRSVPAAPDRHWVEFSVPGAARCLRCRYRSHNGSAWLESEPSPATGGPDLGDAECEPSTGTGTPQNGTGTPQSGTGIPRNGTGTPQNGTGIPQNGTGTPRNGTGTPQNGTGIPQNDPSWLLPVSVGAAVPGLLLLLGAAAVGWRGLRRRRGQSPTVPAPSLPLTPAPTPLSR
SIO_010081: LOC115491799
subclass of: SO_0000673
so part of: LOC115491799
location: join(300434..300881,300974..301174,301294..301380,301699..301742,301833..301874)
location: region:300434-301874:1
so has part: feature:300434-300881:1:exon
so has part: feature:300974-301174:1:exon
so has part: feature:301294-301380:1:exon
so has part: feature:301699-301742:1:exon
so has part: feature:301833-301874:1:exon

XP_030116100.3
type: Protein
SIO_000068: ncbiprotein

position:300434:1
position: 300434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:301874:1
position: 301874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:300434-300881:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:300974-301174:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:301294-301380:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:301699-301742:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:301833-301874:1:exon

LOC115491799
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC115491799
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC115491799 isoform X2
translation: MRMRMGMRMRMRLEFLLLVVAAFASCWSQTGHDPSGDSRRDFGDSRRDSRRDPGPAAPRLLPPPLLLRLPPEPGPARIRCLAPRRFTGSTFELLRGVPPVPVRSVPAAPDRHWVEFSVPGAARCLRCRYRSHNGSAWLESEPSPATGGPDLGDAECEPSTGTGTPQNGTGTPQSGTGIPRNGTGTPQNGTGIPQNGTGTPRNGTGTPQNDPSWLLPVSVGAAVPGLLLLLGAAAVGWRGLRRRRGQSPTVPAPSLPLTPAPTPLSR
SIO_010081: LOC115491799
subclass of: SO_0000673
so part of: LOC115491799
location: join(300434..300881,300974..301153,301294..301380,301699..301742,301833..301874)
location: region:300434-301874:1
so has part: feature:300434-300881:1:exon
so has part: feature:300974-301153:1:exon
so has part: feature:301294-301380:1:exon
so has part: feature:301699-301742:1:exon
so has part: feature:301833-301874:1:exon

XP_041567766.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:300434-300881:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:300974-301153:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:301294-301380:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:301699-301742:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:301833-301874:1:exon

LOC115491799
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC115491799
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC115491799 isoform X3
translation: MRMRMGMRMRMRLEFLLLVVAAFASCWSQTGHDPSGDSRRDFGDSRRDSRRDPGPAAPRLLPPPLLLRLPPEPGPARIRCLAPRRFTGSTFELLRGVPPVPVRSVPAAPDRHWVEFSVPGAARCLRCRYRSHNGSAWLESEPSPATGGPDLGDAECEPSTGTGTPQNGTGTPQSGTGIPRNGTGTPQNGTGIPQNDPSWLLPVSVGAAVPGLLLLLGAAAVGWRGLRRRRGQSPTVPAPSLPLTPAPTPLSR
SIO_010081: LOC115491799
subclass of: SO_0000673
so part of: LOC115491799
location: join(300434..300881,300974..301111,301294..301380,301699..301742,301833..301874)
location: region:300434-301874:1
so has part: feature:300434-300881:1:exon
so has part: feature:300974-301111:1:exon
so has part: feature:301294-301380:1:exon
so has part: feature:301699-301742:1:exon
so has part: feature:301833-301874:1:exon

XP_030116102.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:300434-300881:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:300974-301111:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:301294-301380:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:301699-301742:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:301833-301874:1:exon

LOC115491799
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC115491799
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC115491799 isoform X4
translation: MRMRMGMRMRMRLEFLLLVVAAFASCWSQTGHDPSGDSRRDFGDSRRDSRRDPGPAAPRLLPPPLLLRLPPEPGPARIRCLAPRRFTGSTFELLRGVPPVPVRSVPAAPDRHWVEFSVPGAARCLRCRYRSHNGSAWLESEPSPATGGPDLGDAECEPSTGTGTPQNGTGTPQSGTGIPRNGTGTPQNDPSWLLPVSVGAAVPGLLLLLGAAAVGWRGLRRRRGQSPTVPAPSLPLTPAPTPLSR
SIO_010081: LOC115491799
subclass of: SO_0000673
so part of: LOC115491799
location: join(300434..300881,300974..301090,301294..301380,301699..301742,301833..301874)
location: region:300434-301874:1
so has part: feature:300434-300881:1:exon
so has part: feature:300974-301090:1:exon
so has part: feature:301294-301380:1:exon
so has part: feature:301699-301742:1:exon
so has part: feature:301833-301874:1:exon

XP_041567767.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:300434-300881:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:300974-301090:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:301294-301380:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:301699-301742:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:301833-301874:1:exon

LOC115491799
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC115491799
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC115491799 isoform X5
translation: MRMRMGMRMRMRLEFLLLVVAAFASCWSQTGHDPSGDSRRDFGDSRRDSRRDPGPAAPRLLPPPLLLRLPPEPGPARIRCLAPRRFTGSTFELLRGVPPVPVRSVPAAPDRHWVEFSVPGAARCLRCRYRSHNGSAWLESEPSPATGGPDLGDAECEPSTGTGTPQNGTGTPQSDPSWLLPVSVGAAVPGLLLLLGAAAVGWRGLRRRRGQSPTVPAPSLPLTPAPTPLSR
SIO_010081: LOC115491799
subclass of: SO_0000673
so part of: LOC115491799
location: join(300434..300881,300974..301048,301294..301380,301699..301742,301833..301874)
location: region:300434-301874:1
so has part: feature:300434-300881:1:exon
so has part: feature:300974-301048:1:exon
so has part: feature:301294-301380:1:exon
so has part: feature:301699-301742:1:exon
so has part: feature:301833-301874:1:exon

XP_041567768.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:300434-300881:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:300974-301048:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:301294-301380:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:301699-301742:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:301833-301874:1:exon

CARM1
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: CARM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 302881..312944
location: region:302881-312944:1
so has part: feature:302881-312944:1:exon
subclass of: SO_0000010

115491736
type: Gene
SIO_000068: ncbigene

position:302881:1
position: 302881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:312944:1
position: 312944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:302881-312944:1:exon

CARM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: CARM1
product: coactivator associated arginine methyltransferase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 94 samples with support for all annotated introns
transcript id: XM_032745610.2
SIO_010081: CARM1
subclass of: SO_0000673
so part of: CARM1
location: join(302881..303060,305237..305362,305454..305560,306055..306159,307389..307499,308294..308471,308550..308640,309142..309223,309655..309740,309843..309932,310007..310144,311262..311351,311427..311539,311633..311710,312181..312249,312362..312944)
location: region:302881-312944:1
so has part: feature:302881-303060:1:exon
so has part: feature:305237-305362:1:exon
so has part: feature:305454-305560:1:exon
so has part: feature:306055-306159:1:exon
so has part: feature:307389-307499:1:exon
so has part: feature:308294-308471:1:exon
so has part: feature:308550-308640:1:exon
so has part: feature:309142-309223:1:exon
so has part: feature:309655-309740:1:exon
so has part: feature:309843-309932:1:exon
so has part: feature:310007-310144:1:exon
so has part: feature:311262-311351:1:exon
so has part: feature:311427-311539:1:exon
so has part: feature:311633-311710:1:exon
so has part: feature:312181-312249:1:exon
so has part: feature:312362-312944:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:302881-303060:1:exon

position:303060:1
position: 303060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:305237-305362:1:exon

position:305237:1
position: 305237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:305362:1
position: 305362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:305454-305560:1:exon

position:305454:1
position: 305454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:305560:1
position: 305560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:306055-306159:1:exon

position:306055:1
position: 306055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:306159:1
position: 306159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:307389-307499:1:exon

position:307389:1
position: 307389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:307499:1
position: 307499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:308294-308471:1:exon

position:308294:1
position: 308294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:308471:1
position: 308471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:308550-308640:1:exon

position:308550:1
position: 308550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:308640:1
position: 308640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:309142-309223:1:exon

position:309142:1
position: 309142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:309223:1
position: 309223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:309655-309740:1:exon

position:309655:1
position: 309655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:309740:1
position: 309740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:309843-309932:1:exon

position:309843:1
position: 309843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:309932:1
position: 309932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:310007-310144:1:exon

position:310007:1
position: 310007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:310144:1
position: 310144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:311262-311351:1:exon

position:311262:1
position: 311262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:311351:1
position: 311351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:311427-311539:1:exon

position:311427:1
position: 311427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:311539:1
position: 311539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:311633-311710:1:exon

position:311633:1
position: 311633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:311710:1
position: 311710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:312181-312249:1:exon

position:312181:1
position: 312181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:312249:1
position: 312249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:312362-312944:1:exon

position:312362:1
position: 312362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CARM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: CARM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone-arginine methyltransferase CARM1
translation: MAAVSVFPGVRLLTVGDANGEIQRHQEQQPLRLEVRTGPDSAAIALYGHEDVCVFKCSVSRETECSRVGKQSFIITLGCNSVLLQFGTPTDFCSFYNILKNCRGHNTERSVFSERTEESSAVQYFQFYGYLSQQQNMMQDYVRTGTYQRAILQNHSDFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEASTMAQHAEVLVKSNNLTERIVVIPGKVEEVSLPEQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPTIGDVHLAPFTDEQLYMEQFTKANFWYQPSFHGVDLSALRGAAVDEYFRQPVVDTFDIRILMAKSVKYTVNFLEAKEGDLHRIEIPFKFHMLHSGLVHGLAFWFDVAFIGSIMTVWLSTAPTEPLTHWYQVRCLFQSPLFAKAGDTLSGTCLLVANKRQSYDISIVAQVDQTGSKSSNLLDLKNPFFRYTGTTPSPPPGSHYTSPSENMWSTGSTYNMSTGMAVAGMPAAYDLSSVIAGGSNVGHNNLIPLANTGIVNHTHSRMGSIMSTGIVQGSSGGQSGAGSSGHYPLNSQFTMGGPPISMASPMSITTNTMHYGS
SIO_010081: CARM1
subclass of: SO_0000673
so part of: CARM1
location: join(302916..303060,305237..305362,305454..305560,306055..306159,307389..307499,308294..308471,308550..308640,309142..309223,309655..309740,309843..309932,310007..310144,311262..311351,311427..311539,311633..311710,312181..312249,312362..312498)
location: region:302916-312498:1
so has part: feature:302916-303060:1:exon
so has part: feature:305237-305362:1:exon
so has part: feature:305454-305560:1:exon
so has part: feature:306055-306159:1:exon
so has part: feature:307389-307499:1:exon
so has part: feature:308294-308471:1:exon
so has part: feature:308550-308640:1:exon
so has part: feature:309142-309223:1:exon
so has part: feature:309655-309740:1:exon
so has part: feature:309843-309932:1:exon
so has part: feature:310007-310144:1:exon
so has part: feature:311262-311351:1:exon
so has part: feature:311427-311539:1:exon
so has part: feature:311633-311710:1:exon
so has part: feature:312181-312249:1:exon
so has part: feature:312362-312498:1:exon

XP_032601501.1
type: Protein
SIO_000068: ncbiprotein

position:302916:1
position: 302916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:312498:1
position: 312498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:302916-303060:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:305237-305362:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:305454-305560:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:306055-306159:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:307389-307499:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:308294-308471:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:308550-308640:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:309142-309223:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:309655-309740:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:309843-309932:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:310007-310144:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:311262-311351:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:311427-311539:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:311633-311710:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:312181-312249:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:312362-312498:1:exon

PDE4A
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: PDE4A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(315782..330869)
location: region:315782-330869:-1
so has part: feature:315782-330869:-1:exon
subclass of: SO_0000010

115491570
type: Gene
SIO_000068: ncbigene

position:315782:-1
position: 315782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:330869:-1
position: 330869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:315782-330869:-1:exon

PDE4A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: PDE4A
product: phosphodiesterase 4A
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
transcript id: XM_041711809.1
SIO_010081: PDE4A
subclass of: SO_0000673
so part of: PDE4A
location: complement(join(315782..316495,317312..317494,317917..318039,318643..318797,319013..319112,320285..320449,321037..321135,321785..321958,322533..322626,325780..325892,326313..326356,326460..326533,326692..326728,327205..327378,330278..330869))
location: region:315782-330869:-1
so has part: feature:330278-330869:-1:exon
so has part: feature:327205-327378:-1:exon
so has part: feature:326692-326728:-1:exon
so has part: feature:326460-326533:-1:exon
so has part: feature:326313-326356:-1:exon
so has part: feature:325780-325892:-1:exon
so has part: feature:322533-322626:-1:exon
so has part: feature:321785-321958:-1:exon
so has part: feature:321037-321135:-1:exon
so has part: feature:320285-320449:-1:exon
so has part: feature:319013-319112:-1:exon
so has part: feature:318643-318797:-1:exon
so has part: feature:317917-318039:-1:exon
so has part: feature:317312-317494:-1:exon
so has part: feature:315782-316495:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:330278-330869:-1:exon

position:330278:-1
position: 330278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:327205-327378:-1:exon

position:327205:-1
position: 327205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:327378:-1
position: 327378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:326692-326728:-1:exon

position:326692:-1
position: 326692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:326728:-1
position: 326728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:326460-326533:-1:exon

position:326460:-1
position: 326460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:326533:-1
position: 326533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:326313-326356:-1:exon

position:326313:-1
position: 326313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:326356:-1
position: 326356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:325780-325892:-1:exon

position:325780:-1
position: 325780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:325892:-1
position: 325892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:322533-322626:-1:exon

position:322533:-1
position: 322533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:322626:-1
position: 322626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:321785-321958:-1:exon

position:321785:-1
position: 321785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:321958:-1
position: 321958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:321037-321135:-1:exon

position:321037:-1
position: 321037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:321135:-1
position: 321135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:320285-320449:-1:exon

position:320285:-1
position: 320285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:320449:-1
position: 320449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:319013-319112:-1:exon

position:319013:-1
position: 319013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:319112:-1
position: 319112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:318643-318797:-1:exon

position:318643:-1
position: 318643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:318797:-1
position: 318797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:317917-318039:-1:exon

position:317917:-1
position: 317917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:318039:-1
position: 318039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:317312-317494:-1:exon

position:317312:-1
position: 317312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:317494:-1
position: 317494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:315782-316495:-1:exon

position:316495:-1
position: 316495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PDE4A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: PDE4A
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: cAMP-specific 3',5'-cyclic phosphodiesterase 4A
translation: MMEPVPGSGKSLSLSLPVPREGPGALRPPQHLWRQPRTPIRIRHRGFSDTDRHRPRPMERADAVDTGDRPGLRSARMSWPSSLHGTPGTGKRSEVENGPWGGGPSPPEARGLQAGAPPGQRRESFLYRSDSECPASPRSGSRSSSVASDAHAEDLIVTPFAQVLASLRSVRTNFSILTKATTPPGSTQSPLGSQPPKATLSEDTARQLARDTLEELDWCLEQLETLQTHRAVSEMASNKFKRLLNRELTHLAEMSRSGNQVSEFIASTFLDKQPEVEIPSPGPPEREKRRRPPPXGRVGGGARALPPGCNPPPVPRYGVETDREEQLGKELDSLNQWGLNIFRVSEFSNNRSLSCIMFTVFQERDLVRAFGIPERALLGYARALERHYHPEVAYHNSLHAADVLQSTHVLLATPALQDVFTDLEVLAALFAAAIHDVDHPGVSNQFLINTNSELALLYNDESVLENHHLAVGFKLLQERDCDIFQNLSRRQRQALRQMVIDMVLATDMSKHMSLLADLKTMVETRKVTSSGVLLLDNYTDRIQVLRNMVHCADLSNPTKPLGLYRQWTERIMEEFFRQGDRERERGMEISPMCDKHSASVERSQVGFIDFVVQPLWEAWAELVHPDGREMLRALHENREWFRLRAPPSPEPVPAPGSEPGTGTAPGTARFCFETALEPAPGTGTAPGTPRFCFETALEPGMEPGTEPGTGTPPGTLRIHFEPPPGTVPGSAPGSVPGTPPGSAPGTPPGTLQFYFEPVPEPSPGPGTVPGTPPGTLRFRSEPPPEPPPGPAPGTPPGAGAAPGPPRFRLEPPPGEDGEGREPPREG
SIO_010081: PDE4A
subclass of: SO_0000673
so part of: PDE4A
location: complement(join(315827..316495,317312..317494,317917..318039,318643..318797,319013..319112,320285..320449,321037..321135,321785..321958,322533..322626,325780..325892,326313..326356,326460..326533,326692..326728,327205..327378,330278..330552))
location: region:315827-330552:-1
so has part: feature:330278-330552:-1:exon
so has part: feature:327205-327378:-1:exon
so has part: feature:326692-326728:-1:exon
so has part: feature:326460-326533:-1:exon
so has part: feature:326313-326356:-1:exon
so has part: feature:325780-325892:-1:exon
so has part: feature:322533-322626:-1:exon
so has part: feature:321785-321958:-1:exon
so has part: feature:321037-321135:-1:exon
so has part: feature:320285-320449:-1:exon
so has part: feature:319013-319112:-1:exon
so has part: feature:318643-318797:-1:exon
so has part: feature:317917-318039:-1:exon
so has part: feature:317312-317494:-1:exon
so has part: feature:315827-316495:-1:exon

XP_041567743.1
type: Protein
SIO_000068: ncbiprotein

position:315827:-1
position: 315827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:330552:-1
position: 330552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:330278-330552:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:327205-327378:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:326692-326728:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:326460-326533:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:326313-326356:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:325780-325892:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:322533-322626:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:321785-321958:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:321037-321135:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:320285-320449:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:319013-319112:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:318643-318797:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:317917-318039:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:317312-317494:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:315827-316495:-1:exon

LOC121468340
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121468340
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 334121..334897
location: region:334121-334897:1
so has part: feature:334121-334897:1:exon
subclass of: SO_0000011

121468340
type: Gene
SIO_000068: ncbigene

position:334121:1
position: 334121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:334897:1
position: 334897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:334121-334897:1:exon

LOC121468340
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC121468340
product: uncharacterized LOC121468340
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XR_005978366.1
SIO_010081: LOC121468340
subclass of: SO_0000673
so part of: LOC121468340
location: join(334121..334325,334433..334897)
location: region:334121-334897:1
so has part: feature:334121-334325:1:exon
so has part: feature:334433-334897:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:334121-334325:1:exon

position:334325:1
position: 334325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:334433-334897:1:exon

position:334433:1
position: 334433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115491753
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC115491753
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(335638..342667)
location: region:335638-342667:-1
so has part: feature:335638-342667:-1:exon
subclass of: SO_0000010

115491753
type: Gene
SIO_000068: ncbigene

position:335638:-1
position: 335638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:342667:-1
position: 342667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:335638-342667:-1:exon

LOC115491753
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC115491753
product: protein Hook homolog 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_032745662.2
SIO_010081: LOC115491753
subclass of: SO_0000673
so part of: LOC115491753
location: complement(join(335638..335977,336053..336124,336206..336348,336586..336650,336729..336760,336913..336958,337043..337111,337197..337266,337481..337568,337652..337762,337835..338036,338683..338823,338898..339046,339409..339486,339563..339625,340265..340332,340426..340558,340681..340731,341290..341362,341433..341518,342353..342667))
location: region:335638-342667:-1
so has part: feature:342353-342667:-1:exon
so has part: feature:341433-341518:-1:exon
so has part: feature:341290-341362:-1:exon
so has part: feature:340681-340731:-1:exon
so has part: feature:340426-340558:-1:exon
so has part: feature:340265-340332:-1:exon
so has part: feature:339563-339625:-1:exon
so has part: feature:339409-339486:-1:exon
so has part: feature:338898-339046:-1:exon
so has part: feature:338683-338823:-1:exon
so has part: feature:337835-338036:-1:exon
so has part: feature:337652-337762:-1:exon
so has part: feature:337481-337568:-1:exon
so has part: feature:337197-337266:-1:exon
so has part: feature:337043-337111:-1:exon
so has part: feature:336913-336958:-1:exon
so has part: feature:336729-336760:-1:exon
so has part: feature:336586-336650:-1:exon
so has part: feature:336206-336348:-1:exon
so has part: feature:336053-336124:-1:exon
so has part: feature:335638-335977:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:342353-342667:-1:exon