Taeniopygia guttata isolate Blue55 chromosome 28, bTaeGut1.4.pri, whole genome shotgun sequence.
type: Entry
definition: Taeniopygia guttata isolate Blue55 chromosome 28, bTaeGut1.4.pri, whole genome shotgun sequence.
sequence version: NC_044240.2
sequence date: 2021-05-26
sequence: sequence
division: CON
label: NC_044240.2
type: RefSeq
SIO_000068: refseq
dblink: PRJNA558048
dblink: SAMN02981239
keyword: WGS
keyword: RefSeq
source: Taeniopygia guttata (zebra finch)
organism: Taeniopygia guttata
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Taeniopygia.
reference: 1
references: 33911273
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM012112.2.\nOn May 24, 2021 this sequence version replaced NC_044240.1.\nAssembly name: bTaeGut1.4.pri\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2021/05/04. The original whole-genome shotgun project has the\naccession RRCB00000000.2.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 09-APR-2021\nAssembly Method :: FALCON v. 5.1.1; FALCON unzip v.\n Nov2017(uc4); Purge_dups v. 1.0.1;\n Scaff10X v. 4.1.0; Bionano Solve\n BspQI/BssSI v. 3.4; Salsa2 v. 2.2.; Arrow\n polishing v. variantCaller 2.3.3; Merfin\n filtering v. 0.1; longranger align v.\n 2.2.2; freebayes polishing v. 1.3.1;\n gEVAL manual curation v. 2021-04-09; VGP\n pipeline v. 1.7\nAssembly Name :: bTaeGut1.4.pri\nDiploid :: Principal Pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 88.2x\nSequencing Technology :: PacBio RSII; 10X Genomics linked reads;\n Bionano Genomics two enzymes; Arima\n Genomics Hi-C\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Taeniopygia guttata Annotation\n Release 106\nAnnotation Version :: 106\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.6\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 5866305
topology: linear
so has quality: SO_0000987
location: 1..5866305
location: region:1-5866305:1
RO_0002162: 59729

NC_044240
type: RefSeq
SIO_000068: refseq

PRJNA558048
type: BioProject
SIO_000068: bioproject

SAMN02981239
type: BioSample
SIO_000068: biosample

1
title: Towards complete and error-free genome assemblies of all vertebrate species
author: Rhie, A.
author: McCarthy, S.A.
author: Fedrigo, O.
author: Damas, J.
author: Formenti, G.
author: Koren, S.
author: Uliano-Silva, M.
author: Chow, W.
author: Fungtammasan, A.
author: Kim, J.
author: Lee, C.
author: Ko, B.J.
author: Chaisson, M.
author: Gedman, G.L.
author: Cantin, L.J.
author: Thibaud-Nissen, F.
author: Haggerty, L.
author: Bista, I.
author: Smith, M.
author: Haase, B.
author: Mountcastle, J.
author: Winkler, S.
author: Paez, S.
author: Howard, J.
author: Vernes, S.C.
author: Lama, T.M.
author: Grutzner, F.
author: Warren, W.C.
author: Balakrishnan, C.N.
author: Burt, D.
author: George, J.M.
author: Biegler, M.T.
author: Iorns, D.
author: Digby, A.
author: Eason, D.
author: Robertson, B.
author: Edwards, T.
author: Wilkinson, M.
author: Turner, G.
author: Meyer, A.
author: Kautt, A.F.
author: Franchini, P.
author: Detrich, H.W. 3rd
author: Svardal, H.
author: Wagner, M.
author: Naylor, G.J.P.
author: Pippel, M.
author: Malinsky, M.
author: Mooney, M.
author: Simbirsky, M.
author: Hannigan, B.T.
author: Pesout, T.
author: Houck, M.
author: Misuraca, A.
author: Kingan, S.B.
author: Hall, R.
author: Kronenberg, Z.
author: Sovic, I.
author: Dunn, C.
author: Ning, Z.
author: Hastie, A.
author: Lee, J.
author: Selvaraj, S.
author: Green, R.E.
author: Putnam, N.H.
author: Gut, I.
author: Ghurye, J.
author: Garrison, E.
author: Sims, Y.
author: Collins, J.
author: Pelan, S.
author: Torrance, J.
author: Tracey, A.
author: Wood, J.
author: Dagnew, R.E.
author: Guan, D.
author: London, S.E.
author: Clayton, D.F.

33911273
type: PubMed
SIO_000068: pubmed

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5866305:1
position: 5866305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-5866305:1:source
so part of: sequence
organism: Taeniopygia guttata
mol type: genomic DNA
isolate: Blue55
chromosome: 28
sex: female
tissue type: Muscle, blood, brain
dev stage: adult
country: USA
lat lon: 36.0014 N 78.9382 W
collected by: Matt Biegler, Duke University and Rockefeller University

59729
type: Taxonomy
SIO_000068: taxonomy

OCLN
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: OCLN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1702..10491
location: region:1702-10491:1
so has part: feature:1702-10491:1:exon
subclass of: SO_0000010

115490801
type: Gene
SIO_000068: ncbigene

position:1702:1
position: 1702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10491:1
position: 10491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1702-10491:1:exon

OCLN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: OCLN
product: occludin, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041710928.1
SIO_010081: OCLN
subclass of: SO_0000673
so part of: OCLN
location: join(1702..1798,4040..4752,5996..6154,7991..8130,8578..8787,9288..9459,9760..9801,9906..10491)
location: region:1702-10491:1
so has part: feature:1702-1798:1:exon
so has part: feature:4040-4752:1:exon
so has part: feature:5996-6154:1:exon
so has part: feature:7991-8130:1:exon
so has part: feature:8578-8787:1:exon
so has part: feature:9288-9459:1:exon
so has part: feature:9760-9801:1:exon
so has part: feature:9906-10491:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1702-1798:1:exon

position:1798:1
position: 1798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4040-4752:1:exon

position:4040:1
position: 4040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4752:1
position: 4752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5996-6154:1:exon

position:5996:1
position: 5996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6154:1
position: 6154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7991-8130:1:exon

position:7991:1
position: 7991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8130:1
position: 8130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8578-8787:1:exon

position:8578:1
position: 8578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8787:1
position: 8787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:9288-9459:1:exon

position:9288:1
position: 9288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9459:1
position: 9459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:9760-9801:1:exon

position:9760:1
position: 9760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9801:1
position: 9801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:9906-10491:1:exon

position:9906:1
position: 9906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

OCLN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: OCLN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: occludin isoform X1
translation: MPGGRVCPLPMRRAGMFTKKPYDSPASGYGPPPLTSYGPPAGDYGYDFRARSPPPGSYYVEDAPQHFYRWWSPPGLVRVLEAAVLLLCVAVFACVASTLAWDYGYGYGYGGVLGSGPGGYYGSGYYGSGVNYGYGYGGYYGGVTNPRAANGFMIAMAVLCFLAQLGLLVASLSKSSGSRSRRFYLVVIVVCAVLALLMLVASIVYVVGVNPQAQMSGGYYYSPLLAMCNQVYAGGAVLNQYLYHYCTVDPQEAVAIACGFLMVLLLCLICLFAHKTRSKIWKYGKHNIYWDRPPAGHEGPDVEEWVKNVSGGTSVPDEAATVAYSEKGETPGPAPPYSPPSYSDPPQKGWKSDPPQDPPSPPEEEQDAAPPHPKPPARRGRRRGRRQPEREGSQCSQCSQYDTEPTTAAESGDERDSEQWHRLYPPIGSPSDRQRYKADFGAELRRYKELCAHMDGVNERLAQLAAQLDQVPEDSAQYQALAEEYNHLKDLKRSPEYQEKKRESKTLRNKLFHIKRMVSDYDKLRG
SIO_010081: OCLN
subclass of: SO_0000673
so part of: OCLN
location: join(1756..1798,4040..4752,5996..6154,7991..8130,8578..8787,9288..9459,9760..9801,9906..10007)
location: region:1756-10007:1
so has part: feature:1756-1798:1:exon
so has part: feature:4040-4752:1:exon
so has part: feature:5996-6154:1:exon
so has part: feature:7991-8130:1:exon
so has part: feature:8578-8787:1:exon
so has part: feature:9288-9459:1:exon
so has part: feature:9760-9801:1:exon
so has part: feature:9906-10007:1:exon

XP_041566862.1
type: Protein
SIO_000068: ncbiprotein

position:1756:1
position: 1756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10007:1
position: 10007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1756-1798:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4040-4752:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5996-6154:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7991-8130:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8578-8787:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9288-9459:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9760-9801:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9906-10007:1:exon

OCLN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: OCLN
product: occludin, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_041710929.1
SIO_010081: OCLN
subclass of: SO_0000673
so part of: OCLN
location: join(2263..2335,4040..4752,5996..6154,7991..8130,8578..8787,9288..9459,9760..9801,9906..10491)
location: region:2263-10491:1
so has part: feature:2263-2335:1:exon
so has part: feature:4040-4752:1:exon
so has part: feature:5996-6154:1:exon
so has part: feature:7991-8130:1:exon
so has part: feature:8578-8787:1:exon
so has part: feature:9288-9459:1:exon
so has part: feature:9760-9801:1:exon
so has part: feature:9906-10491:1:exon

position:2263:1
position: 2263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2263-2335:1:exon

position:2335:1
position: 2335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4040-4752:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5996-6154:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7991-8130:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8578-8787:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9288-9459:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9760-9801:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9906-10491:1:exon

OCLN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: OCLN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: occludin isoform X2
translation: MFTKKPYDSPASGYGPPPLTSYGPPAGDYGYDFRARSPPPGSYYVEDAPQHFYRWWSPPGLVRVLEAAVLLLCVAVFACVASTLAWDYGYGYGYGGVLGSGPGGYYGSGYYGSGVNYGYGYGGYYGGVTNPRAANGFMIAMAVLCFLAQLGLLVASLSKSSGSRSRRFYLVVIVVCAVLALLMLVASIVYVVGVNPQAQMSGGYYYSPLLAMCNQVYAGGAVLNQYLYHYCTVDPQEAVAIACGFLMVLLLCLICLFAHKTRSKIWKYGKHNIYWDRPPAGHEGPDVEEWVKNVSGGTSVPDEAATVAYSEKGETPGPAPPYSPPSYSDPPQKGWKSDPPQDPPSPPEEEQDAAPPHPKPPARRGRRRGRRQPEREGSQCSQCSQYDTEPTTAAESGDERDSEQWHRLYPPIGSPSDRQRYKADFGAELRRYKELCAHMDGVNERLAQLAAQLDQVPEDSAQYQALAEEYNHLKDLKRSPEYQEKKRESKTLRNKLFHIKRMVSDYDKLRG
SIO_010081: OCLN
subclass of: SO_0000673
so part of: OCLN
location: join(4042..4752,5996..6154,7991..8130,8578..8787,9288..9459,9760..9801,9906..10007)
location: region:4042-10007:1
so has part: feature:4042-4752:1:exon
so has part: feature:5996-6154:1:exon
so has part: feature:7991-8130:1:exon
so has part: feature:8578-8787:1:exon
so has part: feature:9288-9459:1:exon
so has part: feature:9760-9801:1:exon
so has part: feature:9906-10007:1:exon

XP_041566863.1
type: Protein
SIO_000068: ncbiprotein

position:4042:1
position: 4042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4042-4752:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5996-6154:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7991-8130:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8578-8787:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9288-9459:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9760-9801:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9906-10007:1:exon

NR2F6
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: NR2F6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(11128..17943)
location: region:11128-17943:-1
so has part: feature:11128-17943:-1:exon
subclass of: SO_0000010

100232002
type: Gene
SIO_000068: ncbigene

position:11128:-1
position: 11128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17943:-1
position: 17943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11128-17943:-1:exon

NR2F6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: NR2F6
product: nuclear receptor subfamily 2 group F member 6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 30 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 100 samples with support for all annotated introns
transcript id: XM_030256571.3
SIO_010081: NR2F6
subclass of: SO_0000673
so part of: NR2F6
location: complement(join(11128..12646,13175..13705,14548..14642,17673..17943))
location: region:11128-17943:-1
so has part: feature:17673-17943:-1:exon
so has part: feature:14548-14642:-1:exon
so has part: feature:13175-13705:-1:exon
so has part: feature:11128-12646:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:17673-17943:-1:exon

position:17673:-1
position: 17673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:14548-14642:-1:exon

position:14548:-1
position: 14548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14642:-1
position: 14642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:13175-13705:-1:exon

position:13175:-1
position: 13175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13705:-1
position: 13705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:11128-12646:-1:exon

position:12646:-1
position: 12646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NR2F6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: NR2F6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear receptor subfamily 2 group F member 6
translation: MAMVAGAWGEPNGGGAGGTGGGGGGAEEAASPGGGGSDAEHGEEERPGAGADCVVCGDKSSGKHYGVFTCEGCKSFFKRSIRRNLSYTCRSNRDCQIDQHHRNQCQYCRLKKCFRVGMRKEAVQRGRIPPSHSGGSPNALPAAGDFFNGQPVSELISQLLRAEPYPAARYGAQYAQQPGGAMAIDNICELAARLLFSTVEWARNIPFFPELPVSDQVALLRLSWSELFVLNAAQSALPLHMAPLLAAAGFHASPMSADRVVAFMDQIRVFQEQVEKLNRLQVDSAEYSCLKAIALFTPDACGLSDPAHVETLQEKAQVALTEYERAQFPAQPQRFGRLLLRLPALRAVPAALISQLFFMRLVGKTPIETLIRDMLLSGSTFNWPYGAGQ
SIO_010081: NR2F6
subclass of: SO_0000673
so part of: NR2F6
location: complement(join(12372..12646,13175..13705,14548..14642,17673..17941))
location: region:12372-17941:-1
so has part: feature:17673-17941:-1:exon
so has part: feature:14548-14642:-1:exon
so has part: feature:13175-13705:-1:exon
so has part: feature:12372-12646:-1:exon

XP_030112431.1
type: Protein
SIO_000068: ncbiprotein

position:12372:-1
position: 12372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17941:-1
position: 17941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17673-17941:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:14548-14642:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13175-13705:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12372-12646:-1:exon

USHBP1
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: USHBP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(20652..27268)
location: region:20652-27268:-1
so has part: feature:20652-27268:-1:exon
subclass of: SO_0000010

115490908
type: Gene
SIO_000068: ncbigene

position:20652:-1
position: 20652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27268:-1
position: 27268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20652-27268:-1:exon

USHBP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: USHBP1
product: USH1 protein network component harmonin binding protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041710924.1
SIO_010081: USHBP1
subclass of: SO_0000673
so part of: USHBP1
location: complement(join(20652..21632,22155..22277,22622..22713,22793..23014,23426..23654,23737..23902,24186..24265,24669..24809,25013..25065,25237..25401,25476..25676,25748..26030,26236..26519,26710..27268))
location: region:20652-27268:-1
so has part: feature:26710-27268:-1:exon
so has part: feature:26236-26519:-1:exon
so has part: feature:25748-26030:-1:exon
so has part: feature:25476-25676:-1:exon
so has part: feature:25237-25401:-1:exon
so has part: feature:25013-25065:-1:exon
so has part: feature:24669-24809:-1:exon
so has part: feature:24186-24265:-1:exon
so has part: feature:23737-23902:-1:exon
so has part: feature:23426-23654:-1:exon
so has part: feature:22793-23014:-1:exon
so has part: feature:22622-22713:-1:exon
so has part: feature:22155-22277:-1:exon
so has part: feature:20652-21632:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:26710-27268:-1:exon

position:26710:-1
position: 26710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:26236-26519:-1:exon

position:26236:-1
position: 26236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26519:-1
position: 26519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:25748-26030:-1:exon

position:25748:-1
position: 25748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26030:-1
position: 26030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:25476-25676:-1:exon

position:25476:-1
position: 25476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25676:-1
position: 25676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:25237-25401:-1:exon

position:25237:-1
position: 25237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25401:-1
position: 25401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:25013-25065:-1:exon

position:25013:-1
position: 25013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25065:-1
position: 25065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:24669-24809:-1:exon

position:24669:-1
position: 24669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24809:-1
position: 24809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:24186-24265:-1:exon

position:24186:-1
position: 24186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24265:-1
position: 24265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:23737-23902:-1:exon

position:23737:-1
position: 23737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23902:-1
position: 23902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:23426-23654:-1:exon

position:23426:-1
position: 23426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23654:-1
position: 23654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:22793-23014:-1:exon

position:22793:-1
position: 22793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23014:-1
position: 23014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:22622-22713:-1:exon

position:22622:-1
position: 22622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22713:-1
position: 22713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:22155-22277:-1:exon

position:22155:-1
position: 22155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22277:-1
position: 22277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:20652-21632:-1:exon

position:21632:-1
position: 21632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

USHBP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: USHBP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Usher syndrome type-1C protein-binding protein 1 isoform X2
translation: MGDWERTREPRENWGSRKEWGKRERMGTPGLDWDLLGARVWSQDILDPQMEPGPAGSTSLELGRAGSPESLGQDDPGMEEERPVGATRSAPGAERDAATGTATAARAPRGEEEDEEEEEEEEEEEEEEEEEEEEEEEEEDEEEEEEEDEDEDVASDTEDIPLLAGAAPPQQRPASEDEDGWEATATVPTVATASGPDGKRRAPRHRVCHCRSVPALTAAVSPSLSPARSPDLFERLQHAVSSLERAAFSRHRQPPAWPPPAPAWHRALQSLEELSRSPGWARPGRAAGPGLPAEAAEAAARNASLRAALEQRDRELGRATAALRALRGERERLQGKVRDLREALARLEELEASGSDTPGVGDTSGVGDTPGTGDSPGTGDTPGPSSPPGHRPSTGPSQEQEERLQQLQGLLARLQEANRELAAALGECKGEAERLSMELGRRESRCSGLRMALRCSERCGEAYAALLDRVRAKVAPEGGTRGGTAAEPSPGRAPGPGPATPEPGPSPATPEPGPGPATPEPAEPDSREDPADSPGARSSRGMEEGALRELIRRLRAEQAAVEGSLLDAPEPSEPPRERDPRGRAERALREARALLPGWRRPEKEELLQELAVLKEALAELRTRLQLAQKEKRALELLLAGHGPRQAALRLLLQHRQRERRRDRDRERDGASDSSGSSSSSNSGSSSEQDARMGRGAAMAPQSPPDPERTREELLRIRARAERLRGRARELLRALERGSAASRARQQRSAAATAGLLQAHRSLALALRGARRRQAEQLRRLRARAAALRGQHGRTERALARSLRDLQRGGETCI
SIO_010081: USHBP1
subclass of: SO_0000673
so part of: USHBP1
location: complement(join(21470..21632,22155..22277,22622..22713,22793..23014,23426..23654,23737..23902,24186..24265,24669..24809,25013..25065,25237..25401,25476..25676,25748..26030,26236..26519,26710..26949))
location: region:21470-26949:-1
so has part: feature:26710-26949:-1:exon
so has part: feature:26236-26519:-1:exon
so has part: feature:25748-26030:-1:exon
so has part: feature:25476-25676:-1:exon
so has part: feature:25237-25401:-1:exon
so has part: feature:25013-25065:-1:exon
so has part: feature:24669-24809:-1:exon
so has part: feature:24186-24265:-1:exon
so has part: feature:23737-23902:-1:exon
so has part: feature:23426-23654:-1:exon
so has part: feature:22793-23014:-1:exon
so has part: feature:22622-22713:-1:exon
so has part: feature:22155-22277:-1:exon
so has part: feature:21470-21632:-1:exon

XP_041566858.1
type: Protein
SIO_000068: ncbiprotein

position:21470:-1
position: 21470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26949:-1
position: 26949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26710-26949:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:26236-26519:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:25748-26030:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:25476-25676:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:25237-25401:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:25013-25065:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:24669-24809:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:24186-24265:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:23737-23902:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:23426-23654:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:22793-23014:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:22622-22713:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:22155-22277:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:21470-21632:-1:exon

USHBP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: USHBP1
product: USH1 protein network component harmonin binding protein 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_041710926.1
SIO_010081: USHBP1
subclass of: SO_0000673
so part of: USHBP1
location: complement(join(21822..22277,22622..22713,22793..23014,23426..23654,23737..23902,24186..24265,24669..24809,25013..25065,25237..25401,25476..25676,25748..26030,26236..26519,26710..26802,27115..27268))
location: region:21822-27268:-1
so has part: feature:27115-27268:-1:exon
so has part: feature:26710-26802:-1:exon
so has part: feature:26236-26519:-1:exon
so has part: feature:25748-26030:-1:exon
so has part: feature:25476-25676:-1:exon
so has part: feature:25237-25401:-1:exon
so has part: feature:25013-25065:-1:exon
so has part: feature:24669-24809:-1:exon
so has part: feature:24186-24265:-1:exon
so has part: feature:23737-23902:-1:exon
so has part: feature:23426-23654:-1:exon
so has part: feature:22793-23014:-1:exon
so has part: feature:22622-22713:-1:exon
so has part: feature:21822-22277:-1:exon

position:21822:-1
position: 21822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27115-27268:-1:exon

position:27115:-1
position: 27115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:26710-26802:-1:exon

position:26802:-1
position: 26802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:26236-26519:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:25748-26030:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:25476-25676:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:25237-25401:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:25013-25065:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:24669-24809:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:24186-24265:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:23737-23902:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:23426-23654:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:22793-23014:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:22622-22713:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:21822-22277:-1:exon

USHBP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: USHBP1
product: USH1 protein network component harmonin binding protein 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_041710925.1
SIO_010081: USHBP1
subclass of: SO_0000673
so part of: USHBP1
location: complement(join(21822..22277,22622..22713,22793..23014,23426..23654,23737..23902,24186..24265,24669..24809,25013..25065,25237..25401,25476..25676,25748..25875,25963..26030,26236..26519,26710..27268))
location: region:21822-27268:-1
so has part: feature:26710-27268:-1:exon
so has part: feature:26236-26519:-1:exon
so has part: feature:25963-26030:-1:exon
so has part: feature:25748-25875:-1:exon
so has part: feature:25476-25676:-1:exon
so has part: feature:25237-25401:-1:exon
so has part: feature:25013-25065:-1:exon
so has part: feature:24669-24809:-1:exon
so has part: feature:24186-24265:-1:exon
so has part: feature:23737-23902:-1:exon
so has part: feature:23426-23654:-1:exon
so has part: feature:22793-23014:-1:exon
so has part: feature:22622-22713:-1:exon
so has part: feature:21822-22277:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:26710-27268:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:26236-26519:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:25963-26030:-1:exon

position:25963:-1
position: 25963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:25748-25875:-1:exon

position:25875:-1
position: 25875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:25476-25676:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:25237-25401:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:25013-25065:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:24669-24809:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:24186-24265:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:23737-23902:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:23426-23654:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:22793-23014:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:22622-22713:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:21822-22277:-1:exon

USHBP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: USHBP1
product: USH1 protein network component harmonin binding protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_041710923.1
SIO_010081: USHBP1
subclass of: SO_0000673
so part of: USHBP1
location: complement(join(21822..22277,22622..22713,22793..23014,23426..23654,23737..23902,24186..24265,24669..24809,25013..25065,25237..25401,25476..25676,25748..26030,26236..26519,26710..27268))
location: region:21822-27268:-1
so has part: feature:26710-27268:-1:exon
so has part: feature:26236-26519:-1:exon
so has part: feature:25748-26030:-1:exon
so has part: feature:25476-25676:-1:exon
so has part: feature:25237-25401:-1:exon
so has part: feature:25013-25065:-1:exon
so has part: feature:24669-24809:-1:exon
so has part: feature:24186-24265:-1:exon
so has part: feature:23737-23902:-1:exon
so has part: feature:23426-23654:-1:exon
so has part: feature:22793-23014:-1:exon
so has part: feature:22622-22713:-1:exon
so has part: feature:21822-22277:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:26710-27268:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:26236-26519:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:25748-26030:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:25476-25676:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:25237-25401:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:25013-25065:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:24669-24809:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:24186-24265:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:23737-23902:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:23426-23654:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:22793-23014:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:22622-22713:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:21822-22277:-1:exon

USHBP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: USHBP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Usher syndrome type-1C protein-binding protein 1 isoform X3
translation: MGDWERTREPRENWGSRKEWGKRERMGTPGLDWDLLGARVWSQDILDPQMEPGPAGSTSLELGRAGSPESLGQDDPGMEEERPVGATRSAPGAERDAATGTATAARAPRGEEEDEEEEEEEEEEEEEEEEEEEEEEEEEDEEEEEEEDEDEDVASDTEDIPLLAGAAPPQQRPASEDEDGWEATATVPTVATASGPDARSPDLFERLQHAVSSLERAAFSRHRQPPAWPPPAPAWHRALQSLEELSRSPGWARPGRAAGPGLPAEAAEAAARNASLRAALEQRDRELGRATAALRALRGERERLQGKVRDLREALARLEELEASGSDTPGVGDTSGVGDTPGTGDSPGTGDTPGPSSPPGHRPSTGPSQEQEERLQQLQGLLARLQEANRELAAALGECKGEAERLSMELGRRESRCSGLRMALRCSERCGEAYAALLDRVRAKVAPEGGTRGGTAAEPSPGRAPGPGPATPEPGPSPATPEPGPGPATPEPAEPDSREDPADSPGARSSRGMEEGALRELIRRLRAEQAAVEGSLLDAPEPSEPPRERDPRGRAERALREARALLPGWRRPEKEELLQELAVLKEALAELRTRLQLAQKEKRALELLLAGHGPRQAALRLLLQHRQRERRRDRDRERDGASDSSGSSSSSNSGSSSEQDARMGRGAAMAPQSPPDPERTREELLRIRARAERLRGRARELLRALERGSAASRARQQRSAAATAGLLQAHRWARGAGRRPAGSPGCPLGVVWVSWVSPGSPGCPGSPGPLSPLVLSGSPHAPGSPSSLIPKIPKSRAPLDPSAPLTP
SIO_010081: USHBP1
subclass of: SO_0000673
so part of: USHBP1
location: complement(join(21923..22277,22622..22713,22793..23014,23426..23654,23737..23902,24186..24265,24669..24809,25013..25065,25237..25401,25476..25676,25748..25875,25963..26030,26236..26519,26710..26949))
location: region:21923-26949:-1
so has part: feature:26710-26949:-1:exon
so has part: feature:26236-26519:-1:exon
so has part: feature:25963-26030:-1:exon
so has part: feature:25748-25875:-1:exon
so has part: feature:25476-25676:-1:exon
so has part: feature:25237-25401:-1:exon
so has part: feature:25013-25065:-1:exon
so has part: feature:24669-24809:-1:exon
so has part: feature:24186-24265:-1:exon
so has part: feature:23737-23902:-1:exon
so has part: feature:23426-23654:-1:exon
so has part: feature:22793-23014:-1:exon
so has part: feature:22622-22713:-1:exon
so has part: feature:21923-22277:-1:exon

XP_041566859.1
type: Protein
SIO_000068: ncbiprotein

position:21923:-1
position: 21923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26710-26949:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:26236-26519:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:25963-26030:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:25748-25875:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:25476-25676:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:25237-25401:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:25013-25065:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:24669-24809:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:24186-24265:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:23737-23902:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:23426-23654:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:22793-23014:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:22622-22713:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:21923-22277:-1:exon

USHBP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: USHBP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Usher syndrome type-1C protein-binding protein 1 isoform X1
translation: MGDWERTREPRENWGSRKEWGKRERMGTPGLDWDLLGARVWSQDILDPQMEPGPAGSTSLELGRAGSPESLGQDDPGMEEERPVGATRSAPGAERDAATGTATAARAPRGEEEDEEEEEEEEEEEEEEEEEEEEEEEEEDEEEEEEEDEDEDVASDTEDIPLLAGAAPPQQRPASEDEDGWEATATVPTVATASGPDGKRRAPRHRVCHCRSVPALTAAVSPSLSPARSPDLFERLQHAVSSLERAAFSRHRQPPAWPPPAPAWHRALQSLEELSRSPGWARPGRAAGPGLPAEAAEAAARNASLRAALEQRDRELGRATAALRALRGERERLQGKVRDLREALARLEELEASGSDTPGVGDTSGVGDTPGTGDSPGTGDTPGPSSPPGHRPSTGPSQEQEERLQQLQGLLARLQEANRELAAALGECKGEAERLSMELGRRESRCSGLRMALRCSERCGEAYAALLDRVRAKVAPEGGTRGGTAAEPSPGRAPGPGPATPEPGPSPATPEPGPGPATPEPAEPDSREDPADSPGARSSRGMEEGALRELIRRLRAEQAAVEGSLLDAPEPSEPPRERDPRGRAERALREARALLPGWRRPEKEELLQELAVLKEALAELRTRLQLAQKEKRALELLLAGHGPRQAALRLLLQHRQRERRRDRDRERDGASDSSGSSSSSNSGSSSEQDARMGRGAAMAPQSPPDPERTREELLRIRARAERLRGRARELLRALERGSAASRARQQRSAAATAGLLQAHRWARGAGRRPAGSPGCPLGVVWVSWVSPGSPGCPGSPGPLSPLVLSGSPHAPGSPSSLIPKIPKSRAPLDPSAPLTP
SIO_010081: USHBP1
subclass of: SO_0000673
so part of: USHBP1
location: complement(join(21923..22277,22622..22713,22793..23014,23426..23654,23737..23902,24186..24265,24669..24809,25013..25065,25237..25401,25476..25676,25748..26030,26236..26519,26710..26949))
location: region:21923-26949:-1
so has part: feature:26710-26949:-1:exon
so has part: feature:26236-26519:-1:exon
so has part: feature:25748-26030:-1:exon
so has part: feature:25476-25676:-1:exon
so has part: feature:25237-25401:-1:exon
so has part: feature:25013-25065:-1:exon
so has part: feature:24669-24809:-1:exon
so has part: feature:24186-24265:-1:exon
so has part: feature:23737-23902:-1:exon
so has part: feature:23426-23654:-1:exon
so has part: feature:22793-23014:-1:exon
so has part: feature:22622-22713:-1:exon
so has part: feature:21923-22277:-1:exon

XP_041566857.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26710-26949:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:26236-26519:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:25748-26030:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:25476-25676:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:25237-25401:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:25013-25065:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:24669-24809:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:24186-24265:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:23737-23902:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:23426-23654:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:22793-23014:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:22622-22713:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:21923-22277:-1:exon

USHBP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: USHBP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Usher syndrome type-1C protein-binding protein 1 isoform X4
translation: MEPGPAGSTSLELGRAGSPESLGQDDPGMEEERPVGATRSAPGAERDAATGTATAARAPRGEEEDEEEEEEEEEEEEEEEEEEEEEEEEEDEEEEEEEDEDEDVASDTEDIPLLAGAAPPQQRPASEDEDGWEATATVPTVATASGPDGKRRAPRHRVCHCRSVPALTAAVSPSLSPARSPDLFERLQHAVSSLERAAFSRHRQPPAWPPPAPAWHRALQSLEELSRSPGWARPGRAAGPGLPAEAAEAAARNASLRAALEQRDRELGRATAALRALRGERERLQGKVRDLREALARLEELEASGSDTPGVGDTSGVGDTPGTGDSPGTGDTPGPSSPPGHRPSTGPSQEQEERLQQLQGLLARLQEANRELAAALGECKGEAERLSMELGRRESRCSGLRMALRCSERCGEAYAALLDRVRAKVAPEGGTRGGTAAEPSPGRAPGPGPATPEPGPSPATPEPGPGPATPEPAEPDSREDPADSPGARSSRGMEEGALRELIRRLRAEQAAVEGSLLDAPEPSEPPRERDPRGRAERALREARALLPGWRRPEKEELLQELAVLKEALAELRTRLQLAQKEKRALELLLAGHGPRQAALRLLLQHRQRERRRDRDRERDGASDSSGSSSSSNSGSSSEQDARMGRGAAMAPQSPPDPERTREELLRIRARAERLRGRARELLRALERGSAASRARQQRSAAATAGLLQAHRWARGAGRRPAGSPGCPLGVVWVSWVSPGSPGCPGSPGPLSPLVLSGSPHAPGSPSSLIPKIPKSRAPLDPSAPLTP
SIO_010081: USHBP1
subclass of: SO_0000673
so part of: USHBP1
location: complement(join(21923..22277,22622..22713,22793..23014,23426..23654,23737..23902,24186..24265,24669..24809,25013..25065,25237..25401,25476..25676,25748..26030,26236..26519,26710..26802))
location: region:21923-26802:-1
so has part: feature:26710-26802:-1:exon
so has part: feature:26236-26519:-1:exon
so has part: feature:25748-26030:-1:exon
so has part: feature:25476-25676:-1:exon
so has part: feature:25237-25401:-1:exon
so has part: feature:25013-25065:-1:exon
so has part: feature:24669-24809:-1:exon
so has part: feature:24186-24265:-1:exon
so has part: feature:23737-23902:-1:exon
so has part: feature:23426-23654:-1:exon
so has part: feature:22793-23014:-1:exon
so has part: feature:22622-22713:-1:exon
so has part: feature:21923-22277:-1:exon

XP_041566860.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26710-26802:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:26236-26519:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:25748-26030:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:25476-25676:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:25237-25401:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:25013-25065:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:24669-24809:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:24186-24265:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:23737-23902:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:23426-23654:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:22793-23014:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:22622-22713:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:21923-22277:-1:exon

BABAM1
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: BABAM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 28016..32073
location: region:28016-32073:1
so has part: feature:28016-32073:1:exon
subclass of: SO_0000010

115490804
type: Gene
SIO_000068: ncbigene

position:28016:1
position: 28016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32073:1
position: 32073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28016-32073:1:exon

BABAM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: BABAM1
product: BRISC and BRCA1 A complex member 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_041710930.1
SIO_010081: BABAM1
subclass of: SO_0000673
so part of: BABAM1
location: join(28016..28101,28330..28900,29310..29368,29826..29946,30191..30269,30550..30574,30728..30851,31127..31213,31755..32073)
location: region:28016-32073:1
so has part: feature:28016-28101:1:exon
so has part: feature:28330-28900:1:exon
so has part: feature:29310-29368:1:exon
so has part: feature:29826-29946:1:exon
so has part: feature:30191-30269:1:exon
so has part: feature:30550-30574:1:exon
so has part: feature:30728-30851:1:exon
so has part: feature:31127-31213:1:exon
so has part: feature:31755-32073:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:28016-28101:1:exon

position:28101:1
position: 28101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:28330-28900:1:exon

position:28330:1
position: 28330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28900:1
position: 28900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:29310-29368:1:exon

position:29310:1
position: 29310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29368:1
position: 29368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:29826-29946:1:exon

position:29826:1
position: 29826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29946:1
position: 29946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:30191-30269:1:exon

position:30191:1
position: 30191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30269:1
position: 30269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:30550-30574:1:exon

position:30550:1
position: 30550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30574:1
position: 30574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:30728-30851:1:exon

position:30728:1
position: 30728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30851:1
position: 30851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:31127-31213:1:exon

position:31127:1
position: 31127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31213:1
position: 31213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:31755-32073:1:exon

position:31755:1
position: 31755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

BABAM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: BABAM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BRISC and BRCA1-A complex member 1
translation: MDTSEPSSAAEDEEEKAPEVRPRTRSNPEGAEDRAPSGPGGAGGQREPVGNRGDAVGNLREPVGNRGEAVGNQREPVGNRGDAVGNQREPVGNRGDAVGNRGEAVGNQREAVGSRSEGEGEAASAGHSPPGPAQPGTAWHGPGEVTVRTPRVNCPEKLIICLDLAEEMALPKLESFNGTRSNALTVAQKMIEMFVRTKHKIDKSHEFALVVVNNDSTWLSGFTSDPREVCSCLYDLDTVVCQSFNLDGLFNLIQQKVELPVTESVPTIPPPFVLRTILVLGRCQPPFGGAEQAKKLLQCPYFFFDVVYIHNGLDEKEDESSWKDMFGFLGSLDTKGTSYKFEVALAGPALELHNCMAKLLAHPLQRPCQSHARYGLLDGDSGDGEATP
SIO_010081: BABAM1
subclass of: SO_0000673
so part of: BABAM1
location: join(28427..28900,29310..29368,29826..29946,30191..30269,30550..30574,30728..30851,31127..31213,31755..31952)
location: region:28427-31952:1
so has part: feature:28427-28900:1:exon
so has part: feature:29310-29368:1:exon
so has part: feature:29826-29946:1:exon
so has part: feature:30191-30269:1:exon
so has part: feature:30550-30574:1:exon
so has part: feature:30728-30851:1:exon
so has part: feature:31127-31213:1:exon
so has part: feature:31755-31952:1:exon

XP_041566864.1
type: Protein
SIO_000068: ncbiprotein

position:28427:1
position: 28427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31952:1
position: 31952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28427-28900:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:29310-29368:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:29826-29946:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:30191-30269:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:30550-30574:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:30728-30851:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:31127-31213:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:31755-31952:1:exon

ABHD8
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: ABHD8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(33979..40817)
location: region:33979-40817:-1
so has part: feature:33979-40817:-1:exon
subclass of: SO_0000010

100228634
type: Gene
SIO_000068: ncbigene

position:33979:-1
position: 33979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:40817:-1
position: 40817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33979-40817:-1:exon

ABHD8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: ABHD8
product: abhydrolase domain containing 8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 86 samples with support for all annotated introns
transcript id: XM_032743954.2
SIO_010081: ABHD8
subclass of: SO_0000673
so part of: ABHD8
location: complement(join(33979..34260,34937..35153,35536..35706,37003..37864,40421..40817))
location: region:33979-40817:-1
so has part: feature:40421-40817:-1:exon
so has part: feature:37003-37864:-1:exon
so has part: feature:35536-35706:-1:exon
so has part: feature:34937-35153:-1:exon
so has part: feature:33979-34260:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:40421-40817:-1:exon

position:40421:-1
position: 40421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:37003-37864:-1:exon

position:37003:-1
position: 37003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37864:-1
position: 37864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:35536-35706:-1:exon

position:35536:-1
position: 35536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35706:-1
position: 35706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:34937-35153:-1:exon

position:34937:-1
position: 34937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35153:-1
position: 35153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:33979-34260:-1:exon

position:34260:-1
position: 34260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ABHD8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: ABHD8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein ABHD8
translation: MLTSLTDGFLCCLLGKTPNAVGPLDSVESCDGFTFLEVKPGRVLRIRHGVPERRDPPASPGPAGSPERPALRCQRRITLYRNGQLLIENLPEATGPGSPRRPRPEPDGESGAPEATKDGTATKDGTTTKDGTATKDGVATKDGTATAATKDSTATKDGAATKDGTVTKDGMATTATAAKRRKRKPKRVVTVDCKKRITSCKGTHSDVVLFFIHGVGGSLDIWKEQLEFFSKLGYEVVAPDLAGHGGSSAPPVAAAYTFYALAEDMRVVFKRYAKKRNILIGHSYGVSFCTFLAHEYPELVHKVIMINGGGPTALEPSLCSIFNLPPCVLHCLSPCLAWSFLKAGFARQGAKEKQLLKEGNAFNVSSFVLRATMSGQYWPEGDELYHAELAVPVLLVHGMHDKFVPIEEDQRMAEILLIAFLKVIDEGSHMVMLECPDTVNTLLHEFVLWEPDTPAARGDTK
SIO_010081: ABHD8
subclass of: SO_0000673
so part of: ABHD8
location: complement(join(34117..34260,34937..35153,35536..35706,37003..37856))
location: region:34117-37856:-1
so has part: feature:37003-37856:-1:exon
so has part: feature:35536-35706:-1:exon
so has part: feature:34937-35153:-1:exon
so has part: feature:34117-34260:-1:exon

XP_032599845.2
type: Protein
SIO_000068: ncbiprotein

position:34117:-1
position: 34117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37856:-1
position: 37856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37003-37856:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:35536-35706:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:34937-35153:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:34117-34260:-1:exon

MRPL34
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: MRPL34
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 41533..42363
location: region:41533-42363:1
so has part: feature:41533-42363:1:exon
subclass of: SO_0000010

100231505
type: Gene
SIO_000068: ncbigene

position:41533:1
position: 41533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42363:1
position: 42363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41533-42363:1:exon

MRPL34
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: MRPL34
product: mitochondrial ribosomal protein L34
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs, 3 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 142 samples with support for all annotated introns
transcript id: XM_002189618.6
SIO_010081: MRPL34
subclass of: SO_0000673
so part of: MRPL34
location: join(41533..41804,41895..42363)
location: region:41533-42363:1
so has part: feature:41533-41804:1:exon
so has part: feature:41895-42363:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:41533-41804:1:exon

position:41804:1
position: 41804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:41895-42363:1:exon

position:41895:1
position: 41895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MRPL34
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: MRPL34
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 39S ribosomal protein L34, mitochondrial
translation: MGSGVVGERDNMAALRPVSRSFSLLRGFPFPPLPNALEPLTGSSSAAVLRRLPVLPWGFQQSRGKSRGNEYQPNNWKRKKTHGWIKRIRTAGGIAVILRRMLKGRKSLSH
SIO_010081: MRPL34
subclass of: SO_0000673
so part of: MRPL34
location: join(41743..41804,41895..42165)
location: region:41743-42165:1
so has part: feature:41743-41804:1:exon
so has part: feature:41895-42165:1:exon

XP_002189654.4
type: Protein
SIO_000068: ncbiprotein

position:41743:1
position: 41743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42165:1
position: 42165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41743-41804:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:41895-42165:1:exon

DDA1
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: DDA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 42778..47486
location: region:42778-47486:1
so has part: feature:42778-47486:1:exon
subclass of: SO_0000010

115490565
type: Gene
SIO_000068: ncbigene

position:42778:1
position: 42778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47486:1
position: 47486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42778-47486:1:exon

DDA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: DDA1
product: DET1 and DDB1 associated 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 4 long SRA reads, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 65 samples with support for all annotated introns
transcript id: XM_032743963.2
SIO_010081: DDA1
subclass of: SO_0000673
so part of: DDA1
location: join(42778..42862,43448..43528,44005..44056,44501..44562,44993..47486)
location: region:42778-47486:1
so has part: feature:42778-42862:1:exon
so has part: feature:43448-43528:1:exon
so has part: feature:44005-44056:1:exon
so has part: feature:44501-44562:1:exon
so has part: feature:44993-47486:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:42778-42862:1:exon

position:42862:1
position: 42862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:43448-43528:1:exon

position:43448:1
position: 43448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43528:1
position: 43528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:44005-44056:1:exon

position:44005:1
position: 44005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44056:1
position: 44056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:44501-44562:1:exon

position:44501:1
position: 44501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44562:1
position: 44562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:44993-47486:1:exon

position:44993:1
position: 44993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DDA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: DDA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DET1- and DDB1-associated protein 1
translation: MADFLKGLPVYNKSNFSRFHADSVCKASNRRPSVYLPTREFPSEQIIVTEKTNILLRYLHQQWDKKNAAKKREQEQGELEGENSAPPRKIARTGSQDMTEDT
SIO_010081: DDA1
subclass of: SO_0000673
so part of: DDA1
location: join(42860..42862,43448..43528,44005..44056,44501..44562,44993..45103)
location: region:42860-45103:1
so has part: feature:42860-42862:1:exon
so has part: feature:43448-43528:1:exon
so has part: feature:44005-44056:1:exon
so has part: feature:44501-44562:1:exon
so has part: feature:44993-45103:1:exon

XP_032599854.1
type: Protein
SIO_000068: ncbiprotein

position:42860:1
position: 42860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45103:1
position: 45103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42860-42862:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:43448-43528:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:44005-44056:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:44501-44562:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:44993-45103:1:exon

ANO8
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: ANO8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(48493..62577)
location: region:48493-62577:-1
so has part: feature:48493-62577:-1:exon
subclass of: SO_0000010

105760450
type: Gene
SIO_000068: ncbigene

position:48493:-1
position: 48493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:62577:-1
position: 62577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48493-62577:-1:exon

ANO8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: ANO8
product: anoctamin 8, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_041710915.1
SIO_010081: ANO8
subclass of: SO_0000673
so part of: ANO8
location: complement(join(48493..50647,51429..51599,51860..51970,52484..52615,53003..53194,53632..54270,54619..54762,55009..55083,55560..55615,55706..55832,56346..56498,56970..57152,57411..57538,57713..57829,58266..58362,58629..58767,59425..59557,60153..60263,62433..62577))
location: region:48493-62577:-1
so has part: feature:62433-62577:-1:exon
so has part: feature:60153-60263:-1:exon
so has part: feature:59425-59557:-1:exon
so has part: feature:58629-58767:-1:exon
so has part: feature:58266-58362:-1:exon
so has part: feature:57713-57829:-1:exon
so has part: feature:57411-57538:-1:exon
so has part: feature:56970-57152:-1:exon
so has part: feature:56346-56498:-1:exon
so has part: feature:55706-55832:-1:exon
so has part: feature:55560-55615:-1:exon
so has part: feature:55009-55083:-1:exon
so has part: feature:54619-54762:-1:exon
so has part: feature:53632-54270:-1:exon
so has part: feature:53003-53194:-1:exon
so has part: feature:52484-52615:-1:exon
so has part: feature:51860-51970:-1:exon
so has part: feature:51429-51599:-1:exon
so has part: feature:48493-50647:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:62433-62577:-1:exon

position:62433:-1
position: 62433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:60153-60263:-1:exon

position:60153:-1
position: 60153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:60263:-1
position: 60263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:59425-59557:-1:exon

position:59425:-1
position: 59425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:59557:-1
position: 59557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:58629-58767:-1:exon

position:58629:-1
position: 58629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:58767:-1
position: 58767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:58266-58362:-1:exon

position:58266:-1
position: 58266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:58362:-1
position: 58362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:57713-57829:-1:exon

position:57713:-1
position: 57713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57829:-1
position: 57829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:57411-57538:-1:exon

position:57411:-1
position: 57411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57538:-1
position: 57538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:56970-57152:-1:exon

position:56970:-1
position: 56970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57152:-1
position: 57152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:56346-56498:-1:exon

position:56346:-1
position: 56346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:56498:-1
position: 56498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:55706-55832:-1:exon

position:55706:-1
position: 55706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:55832:-1
position: 55832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:55560-55615:-1:exon

position:55560:-1
position: 55560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:55615:-1
position: 55615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:55009-55083:-1:exon

position:55009:-1
position: 55009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:55083:-1
position: 55083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:54619-54762:-1:exon

position:54619:-1
position: 54619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54762:-1
position: 54762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:53632-54270:-1:exon

position:53632:-1
position: 53632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54270:-1
position: 54270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:53003-53194:-1:exon

position:53003:-1
position: 53003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53194:-1
position: 53194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:52484-52615:-1:exon

position:52484:-1
position: 52484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:52615:-1
position: 52615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:51860-51970:-1:exon

position:51860:-1
position: 51860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51970:-1
position: 51970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:51429-51599:-1:exon

position:51429:-1
position: 51429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51599:-1
position: 51599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:48493-50647:-1:exon

position:50647:-1
position: 50647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ANO8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: ANO8
product: anoctamin 8, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_030256845.3
SIO_010081: ANO8
subclass of: SO_0000673
so part of: ANO8
location: complement(join(48493..50647,51429..51602,51860..51970,52484..52615,53003..53194,53632..54270,54619..54762,55009..55083,55560..55615,55706..55832,56346..56498,56970..57131,57411..57538,57713..57829,58266..58362,58629..58767,59425..59557,60153..60263,62433..62576))
location: region:48493-62576:-1
so has part: feature:62433-62576:-1:exon
so has part: feature:60153-60263:-1:exon
so has part: feature:59425-59557:-1:exon
so has part: feature:58629-58767:-1:exon
so has part: feature:58266-58362:-1:exon
so has part: feature:57713-57829:-1:exon
so has part: feature:57411-57538:-1:exon
so has part: feature:56970-57131:-1:exon
so has part: feature:56346-56498:-1:exon
so has part: feature:55706-55832:-1:exon
so has part: feature:55560-55615:-1:exon
so has part: feature:55009-55083:-1:exon
so has part: feature:54619-54762:-1:exon
so has part: feature:53632-54270:-1:exon
so has part: feature:53003-53194:-1:exon
so has part: feature:52484-52615:-1:exon
so has part: feature:51860-51970:-1:exon
so has part: feature:51429-51602:-1:exon
so has part: feature:48493-50647:-1:exon

position:62576:-1
position: 62576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62433-62576:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:60153-60263:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:59425-59557:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:58629-58767:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:58266-58362:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:57713-57829:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:57411-57538:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:56970-57131:-1:exon

position:57131:-1
position: 57131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:56346-56498:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:55706-55832:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:55560-55615:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:55009-55083:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:54619-54762:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:53632-54270:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:53003-53194:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:52484-52615:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:51860-51970:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:51429-51602:-1:exon

position:51602:-1
position: 51602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:48493-50647:-1:exon

ANO8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: ANO8
product: anoctamin 8, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_030256846.3
SIO_010081: ANO8
subclass of: SO_0000673
so part of: ANO8
location: complement(join(48493..50647,51429..51602,51860..51970,52484..52615,53003..53194,53632..54270,55009..55083,55560..55615,55706..55832,56346..56498,56970..57152,57411..57538,57713..57829,58266..58362,58629..58767,59425..59557,60153..60263,62433..62576))
location: region:48493-62576:-1
so has part: feature:62433-62576:-1:exon
so has part: feature:60153-60263:-1:exon
so has part: feature:59425-59557:-1:exon
so has part: feature:58629-58767:-1:exon
so has part: feature:58266-58362:-1:exon
so has part: feature:57713-57829:-1:exon
so has part: feature:57411-57538:-1:exon
so has part: feature:56970-57152:-1:exon
so has part: feature:56346-56498:-1:exon
so has part: feature:55706-55832:-1:exon
so has part: feature:55560-55615:-1:exon
so has part: feature:55009-55083:-1:exon
so has part: feature:53632-54270:-1:exon
so has part: feature:53003-53194:-1:exon
so has part: feature:52484-52615:-1:exon
so has part: feature:51860-51970:-1:exon
so has part: feature:51429-51602:-1:exon
so has part: feature:48493-50647:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:62433-62576:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:60153-60263:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:59425-59557:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:58629-58767:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:58266-58362:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:57713-57829:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:57411-57538:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:56970-57152:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:56346-56498:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:55706-55832:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:55560-55615:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:55009-55083:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:53632-54270:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:53003-53194:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:52484-52615:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:51860-51970:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:51429-51602:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:48493-50647:-1:exon

ANO8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: ANO8
product: anoctamin 8, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_030256844.3
SIO_010081: ANO8
subclass of: SO_0000673
so part of: ANO8
location: complement(join(48493..50647,51429..51602,51860..51970,52484..52615,53003..53194,53632..54270,54619..54762,55009..55083,55560..55615,55706..55832,56346..56498,56970..57152,57411..57538,57713..57829,58266..58362,58629..58767,59425..59557,60153..60263,62433..62576))
location: region:48493-62576:-1
so has part: feature:62433-62576:-1:exon
so has part: feature:60153-60263:-1:exon
so has part: feature:59425-59557:-1:exon
so has part: feature:58629-58767:-1:exon
so has part: feature:58266-58362:-1:exon
so has part: feature:57713-57829:-1:exon
so has part: feature:57411-57538:-1:exon
so has part: feature:56970-57152:-1:exon
so has part: feature:56346-56498:-1:exon
so has part: feature:55706-55832:-1:exon
so has part: feature:55560-55615:-1:exon
so has part: feature:55009-55083:-1:exon
so has part: feature:54619-54762:-1:exon
so has part: feature:53632-54270:-1:exon
so has part: feature:53003-53194:-1:exon
so has part: feature:52484-52615:-1:exon
so has part: feature:51860-51970:-1:exon
so has part: feature:51429-51602:-1:exon
so has part: feature:48493-50647:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:62433-62576:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:60153-60263:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:59425-59557:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:58629-58767:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:58266-58362:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:57713-57829:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:57411-57538:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:56970-57152:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:56346-56498:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:55706-55832:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:55560-55615:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:55009-55083:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:54619-54762:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:53632-54270:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:53003-53194:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:52484-52615:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:51860-51970:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:51429-51602:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:48493-50647:-1:exon

ANO8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: ANO8
product: anoctamin 8, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 65 samples with support for all annotated introns
transcript id: XM_030256847.3
SIO_010081: ANO8
subclass of: SO_0000673
so part of: ANO8
location: complement(join(48493..50647,51429..51602,51860..51970,52484..52615,53003..53194,53632..54270,55009..55083,55560..55615,55706..55832,56346..56498,56970..57131,57411..57538,57713..57829,58266..58362,58629..58767,59425..59557,60153..60263,62433..62575))
location: region:48493-62575:-1
so has part: feature:62433-62575:-1:exon
so has part: feature:60153-60263:-1:exon
so has part: feature:59425-59557:-1:exon
so has part: feature:58629-58767:-1:exon
so has part: feature:58266-58362:-1:exon
so has part: feature:57713-57829:-1:exon
so has part: feature:57411-57538:-1:exon
so has part: feature:56970-57131:-1:exon
so has part: feature:56346-56498:-1:exon
so has part: feature:55706-55832:-1:exon
so has part: feature:55560-55615:-1:exon
so has part: feature:55009-55083:-1:exon
so has part: feature:53632-54270:-1:exon
so has part: feature:53003-53194:-1:exon
so has part: feature:52484-52615:-1:exon
so has part: feature:51860-51970:-1:exon
so has part: feature:51429-51602:-1:exon
so has part: feature:48493-50647:-1:exon

position:62575:-1
position: 62575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62433-62575:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:60153-60263:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:59425-59557:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:58629-58767:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:58266-58362:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:57713-57829:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:57411-57538:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:56970-57131:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:56346-56498:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:55706-55832:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:55560-55615:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:55009-55083:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:53632-54270:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:53003-53194:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:52484-52615:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:51860-51970:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:51429-51602:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:48493-50647:-1:exon

ANO8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: ANO8
product: anoctamin 8, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_032743934.2
SIO_010081: ANO8
subclass of: SO_0000673
so part of: ANO8
location: complement(join(48493..50647,51429..51602,51860..51970,52484..52615,53003..53194,53632..54270,54619..54762,55009..55083,55560..55615,55706..55832,56346..56498,56970..57152,57411..57538,57713..57829,58266..58362,58629..58767,59425..59557,60153..60263,61761..61914))
location: region:48493-61914:-1
so has part: feature:61761-61914:-1:exon
so has part: feature:60153-60263:-1:exon
so has part: feature:59425-59557:-1:exon
so has part: feature:58629-58767:-1:exon
so has part: feature:58266-58362:-1:exon
so has part: feature:57713-57829:-1:exon
so has part: feature:57411-57538:-1:exon
so has part: feature:56970-57152:-1:exon
so has part: feature:56346-56498:-1:exon
so has part: feature:55706-55832:-1:exon
so has part: feature:55560-55615:-1:exon
so has part: feature:55009-55083:-1:exon
so has part: feature:54619-54762:-1:exon
so has part: feature:53632-54270:-1:exon
so has part: feature:53003-53194:-1:exon
so has part: feature:52484-52615:-1:exon
so has part: feature:51860-51970:-1:exon
so has part: feature:51429-51602:-1:exon
so has part: feature:48493-50647:-1:exon

position:61914:-1
position: 61914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61761-61914:-1:exon

position:61761:-1
position: 61761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:60153-60263:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:59425-59557:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:58629-58767:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:58266-58362:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:57713-57829:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:57411-57538:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:56970-57152:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:56346-56498:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:55706-55832:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:55560-55615:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:55009-55083:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:54619-54762:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:53632-54270:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:53003-53194:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:52484-52615:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:51860-51970:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:51429-51602:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:48493-50647:-1:exon

ANO8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: ANO8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: anoctamin-8 isoform X6
translation: MPEPPTAAQDGERPRRAPAAEERAEPAAPTGVLDKLFGKRLLQAGRYIMSHKAWMKTVPTENCDVLMTFPDSTDDHTLLWLLNHIRLGIPELIVQVRHHRHTRVYAFFVTATYESLLRGADEMGLRKPVKAEFGGGMRGFSCEEDYIYENIENELGFFSSQERQSIIRYWLENLRAKQGESLHNIHFLEGQPIIPELAARGVIQQLFPLHEQRILKRLMKSWVQAVCEAQPLDDICDYFGVKIAMYFAWLGFYTSAMVYPAVFGSILYTFTDSDQTSQDISCVVFAIFNVVWATLFLEEWKRRGAEFAYKWGTLDTPAESLEEPRPQFRGTRRISPVTSAEEFYYPPWKRLLFQSLVSVPVCLACLAIVFLLMLGCFQLQEFVLSVQELPRVLRFLPKIILAVIVAACDELYKKVALWLNDMENYRLQSAYEKHLIIKIVLFQFVNSYLSLFYVGFYLKDMERLKEMLATLLITRQLLQNVREVSQPQLQLGARSLRQLCRALLRRLGPQPPQPPQPPGPRGHKKCLNGGCGVPEEEEEEEEEEERRGSEAEEEGALDCGLRLRKVSFIERGERRAEPAGPGDEPFLEEGSPTMVEKGMDPAAVFELADDEEEEAEAQPGSPGRAEEPAVLARRRRREEEEGEEEGRKRNRASWIDPPEEDYSTQLTQAEVESCMKKYEDTFQDYQEMFIQFGYVVLFSSAFPLAAACALLNNVLEIRSDAFKLCTGLQRPFGQRVASIGQWQAVMEAMGVLAIVVNCYLLAQCGQLRRLCPWLSPEGAIVSVVVLEHFALLLKYVIQVAIPDIPAWVAEEMAKLEYQRREAFKKHERQAQHHFQQQQRRRREEEERQRQAELQARRDRDPTRDEATKSEATGQDPAHDKGQAKGKSSGGSSAHGPDKPKRPSSLLATNNVLKLKQIIPLQGKFLPGAGAAAGAGAGAGARSPQSPTGGENKLPAFLSFRFLRPPEARRDAAPEKAQSPTKPFNPGKLFGFGRSDGPGGNGGAAPQPRAGPSADAAPGKAQLSEDGAREDAENRAEEEGGGARL
SIO_010081: ANO8
subclass of: SO_0000673
so part of: ANO8
location: complement(join(50159..50647,51429..51602,51860..51970,52484..52615,53003..53194,53632..54270,55009..55083,55560..55615,55706..55832,56346..56498,56970..57131,57411..57538,57713..57829,58266..58362,58629..58767,59425..59557,60153..60263,62433..62532))
location: region:50159-62532:-1
so has part: feature:62433-62532:-1:exon
so has part: feature:60153-60263:-1:exon
so has part: feature:59425-59557:-1:exon
so has part: feature:58629-58767:-1:exon
so has part: feature:58266-58362:-1:exon
so has part: feature:57713-57829:-1:exon
so has part: feature:57411-57538:-1:exon
so has part: feature:56970-57131:-1:exon
so has part: feature:56346-56498:-1:exon
so has part: feature:55706-55832:-1:exon
so has part: feature:55560-55615:-1:exon
so has part: feature:55009-55083:-1:exon
so has part: feature:53632-54270:-1:exon
so has part: feature:53003-53194:-1:exon
so has part: feature:52484-52615:-1:exon
so has part: feature:51860-51970:-1:exon
so has part: feature:51429-51602:-1:exon
so has part: feature:50159-50647:-1:exon

XP_030112707.3
type: Protein
SIO_000068: ncbiprotein

position:50159:-1
position: 50159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:62532:-1
position: 62532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62433-62532:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:60153-60263:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:59425-59557:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:58629-58767:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:58266-58362:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:57713-57829:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:57411-57538:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:56970-57131:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:56346-56498:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:55706-55832:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:55560-55615:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:55009-55083:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:53632-54270:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:53003-53194:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:52484-52615:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:51860-51970:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:51429-51602:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:50159-50647:-1:exon

ANO8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: ANO8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: anoctamin-8 isoform X3
translation: MPEPPTAAQDGERPRRAPAAEERAEPAAPTGVLDKLFGKRLLQAGRYIMSHKAWMKTVPTENCDVLMTFPDSTDDHTLLWLLNHIRLGIPELIVQVRHHRHTRVYAFFVTATYESLLRGADEMGLRKPVKAEFGGGMRGFSCEEDYIYENIENELGFFSSQERQSIIRYWLENLRAKQGESLHNIHFLEGQPIIPELAARGVIQQLFPLHEQRILKRLMKSWVQAVCEAQPLDDICDYFGVKIAMYFAWLGFYTSAMVYPAVFGSILYTFTDSDQTSQDISCVVFAIFNVVWATLFLEEWKRRGAEFAYKWGTLDTPAESLEEPRPQFRGTRRISPVTSAEEFYYPPWKRLLFQSLVSVPVCLACLAIVFLLMLGCFQLQEFVLSVQELPRVLRFLPKIILAVIVAACDELYKKVALWLNDMENYRLQSAYEKHLIIKIVLFQFVNSYLSLFYVGFYLKDMERLKELLLILSLSQSLARQLREALLPSILLHLHLSLIFLRRLLRLSWTLALSKMLATLLITRQLLQNVREVSQPQLQLGARSLRQLCRALLRRLGPQPPQPPQPPGPRGHKKCLNGGCGVPEEEEEEEEEEERRGSEAEEEGALDCGLRLRKVSFIERGERRAEPAGPGDEPFLEEGSPTMVEKGMDPAAVFELADDEEEEAEAQPGSPGRAEEPAVLARRRRREEEEGEEEGRKRNRASWIDPPEEDYSTQLTQAEVESCMKKYEDTFQDYQEMFIQFGYVVLFSSAFPLAAACALLNNVLEIRSDAFKLCTGLQRPFGQRVASIGQWQAVMEAMGVLAIVVNCYLLAQCGQLRRLCPWLSPEGAIVSVVVLEHFALLLKYVIQVAIPDIPAWVAEEMAKLEYQRREAFKKHERQAQHHFQQQQRRRREEEERQRQAELQARRDRDPTRDEATKSEATGQDPAHDKGQAKGKSSGGSSAHGPDKPKRPSSLLATNNVLKLKQIIPLQGKFLPGAGAAAGAGAGAGARSPQSPTGGENKLPAFLSFRFLRPPEARRDAAPEKAQSPTKPFNPGKLFGFGRSDGPGGNGGAAPQPRAGPSADAAPGKAQLSEDGAREDAENRAEEEGGGARL
SIO_010081: ANO8
subclass of: SO_0000673
so part of: ANO8
location: complement(join(50159..50647,51429..51602,51860..51970,52484..52615,53003..53194,53632..54270,54619..54762,55009..55083,55560..55615,55706..55832,56346..56498,56970..57131,57411..57538,57713..57829,58266..58362,58629..58767,59425..59557,60153..60263,62433..62532))
location: region:50159-62532:-1
so has part: feature:62433-62532:-1:exon
so has part: feature:60153-60263:-1:exon
so has part: feature:59425-59557:-1:exon
so has part: feature:58629-58767:-1:exon
so has part: feature:58266-58362:-1:exon
so has part: feature:57713-57829:-1:exon
so has part: feature:57411-57538:-1:exon
so has part: feature:56970-57131:-1:exon
so has part: feature:56346-56498:-1:exon
so has part: feature:55706-55832:-1:exon
so has part: feature:55560-55615:-1:exon
so has part: feature:55009-55083:-1:exon
so has part: feature:54619-54762:-1:exon
so has part: feature:53632-54270:-1:exon
so has part: feature:53003-53194:-1:exon
so has part: feature:52484-52615:-1:exon
so has part: feature:51860-51970:-1:exon
so has part: feature:51429-51602:-1:exon
so has part: feature:50159-50647:-1:exon

XP_030112705.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:62433-62532:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:60153-60263:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:59425-59557:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:58629-58767:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:58266-58362:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:57713-57829:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:57411-57538:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:56970-57131:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:56346-56498:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:55706-55832:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:55560-55615:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:55009-55083:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:54619-54762:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:53632-54270:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:53003-53194:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:52484-52615:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:51860-51970:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:51429-51602:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:50159-50647:-1:exon

ANO8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: ANO8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: anoctamin-8 isoform X4
translation: MPEPPTAAQDGERPRRAPAAEERAEPAAPTGVLDKLFGKRLLQAGRYIMSHKAWMKTVPTENCDVLMTFPDSTDDHTLLWLLNHIRLGIPELIVQVRHHRHTRVYAFFVTATYESLLRGADEMGLRKPVKAEFGGGMRGFSCEEDYIYENIENELGFFSSQERQSIIRYWLENLRAKQGESLHNIHFLEGQPIIPELAARGVIQQLFPLHEQRILKRLMKSWVQAVCEAQPLDDICDYFGVKIAMYFAWLGFYTSAMVYPAVFGSILYTFTDSDQSALSIPQTSQDISCVVFAIFNVVWATLFLEEWKRRGAEFAYKWGTLDTPAESLEEPRPQFRGTRRISPVTSAEEFYYPPWKRLLFQSLVSVPVCLACLAIVFLLMLGCFQLQEFVLSVQELPRVLRFLPKIILAVIVAACDELYKKVALWLNDMENYRLQSAYEKHLIIKIVLFQFVNSYLSLFYVGFYLKDMERLKEMLATLLITRQLLQNVREVSQPQLQLGARSLRQLCRALLRRLGPQPPQPPQPPGPRGHKKCLNGGCGVPEEEEEEEEEEERRGSEAEEEGALDCGLRLRKVSFIERGERRAEPAGPGDEPFLEEGSPTMVEKGMDPAAVFELADDEEEEAEAQPGSPGRAEEPAVLARRRRREEEEGEEEGRKRNRASWIDPPEEDYSTQLTQAEVESCMKKYEDTFQDYQEMFIQFGYVVLFSSAFPLAAACALLNNVLEIRSDAFKLCTGLQRPFGQRVASIGQWQAVMEAMGVLAIVVNCYLLAQCGQLRRLCPWLSPEGAIVSVVVLEHFALLLKYVIQVAIPDIPAWVAEEMAKLEYQRREAFKKHERQAQHHFQQQQRRRREEEERQRQAELQARRDRDPTRDEATKSEATGQDPAHDKGQAKGKSSGGSSAHGPDKPKRPSSLLATNNVLKLKQIIPLQGKFLPGAGAAAGAGAGAGARSPQSPTGGENKLPAFLSFRFLRPPEARRDAAPEKAQSPTKPFNPGKLFGFGRSDGPGGNGGAAPQPRAGPSADAAPGKAQLSEDGAREDAENRAEEEGGGARL
SIO_010081: ANO8
subclass of: SO_0000673
so part of: ANO8
location: complement(join(50159..50647,51429..51602,51860..51970,52484..52615,53003..53194,53632..54270,55009..55083,55560..55615,55706..55832,56346..56498,56970..57152,57411..57538,57713..57829,58266..58362,58629..58767,59425..59557,60153..60263,62433..62532))
location: region:50159-62532:-1
so has part: feature:62433-62532:-1:exon
so has part: feature:60153-60263:-1:exon
so has part: feature:59425-59557:-1:exon
so has part: feature:58629-58767:-1:exon
so has part: feature:58266-58362:-1:exon
so has part: feature:57713-57829:-1:exon
so has part: feature:57411-57538:-1:exon
so has part: feature:56970-57152:-1:exon
so has part: feature:56346-56498:-1:exon
so has part: feature:55706-55832:-1:exon
so has part: feature:55560-55615:-1:exon
so has part: feature:55009-55083:-1:exon
so has part: feature:53632-54270:-1:exon
so has part: feature:53003-53194:-1:exon
so has part: feature:52484-52615:-1:exon
so has part: feature:51860-51970:-1:exon
so has part: feature:51429-51602:-1:exon
so has part: feature:50159-50647:-1:exon

XP_030112706.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:62433-62532:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:60153-60263:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:59425-59557:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:58629-58767:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:58266-58362:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:57713-57829:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:57411-57538:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:56970-57152:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:56346-56498:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:55706-55832:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:55560-55615:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:55009-55083:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:53632-54270:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:53003-53194:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:52484-52615:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:51860-51970:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:51429-51602:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:50159-50647:-1:exon

ANO8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: ANO8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: anoctamin-8 isoform X2
translation: MPEPPTAAQDGERPRRAPAAEERAEPAAPTGVLDKLFGKRLLQAGRYIMSHKAWMKTVPTENCDVLMTFPDSTDDHTLLWLLNHIRLGIPELIVQVRHHRHTRVYAFFVTATYESLLRGADEMGLRKPVKAEFGGGMRGFSCEEDYIYENIENELGFFSSQERQSIIRYWLENLRAKQGESLHNIHFLEGQPIIPELAARGVIQQLFPLHEQRILKRLMKSWVQAVCEAQPLDDICDYFGVKIAMYFAWLGFYTSAMVYPAVFGSILYTFTDSDQSALSIPQTSQDISCVVFAIFNVVWATLFLEEWKRRGAEFAYKWGTLDTPAESLEEPRPQFRGTRRISPVTSAEEFYYPPWKRLLFQSLVSVPVCLACLAIVFLLMLGCFQLQEFVLSVQELPRVLRFLPKIILAVIVAACDELYKKVALWLNDMENYRLQSAYEKHLIIKIVLFQFVNSYLSLFYVGFYLKDMERLKELLLILSLSQSLARQLREALLPSILLHLHLSLIFLRRLLRLSWTLALSKMLATLLITRQLLQNVREVSQPQLQLGARSLRQLCRALLRRLGPQPPQPPQPPGPRGHKKCLNGGCGVPEEEEEEEEEEERRGSEAEEEGALDCGLRLRKVSFIERGERRAEPAGPGDEPFLEEGSPTMVEKGMDPAAVFELADDEEEEAEAQPGSPGRAEEPAVLARRRRREEEEGEEEGRKRNRASWIDPPEEDYSTQLTQAEVESCMKKYEDTFQDYQEMFIQFGYVVLFSSAFPLAAACALLNNVLEIRSDAFKLCTGLQRPFGQRVASIGQWQAVMEAMGVLAIVVNCYLLAQCGQLRRLCPWLSPEGAIVSVVVLEHFALLLKYVIQVAIPDIPAWVAEEMAKLEYQRREAFKHERQAQHHFQQQQRRRREEEERQRQAELQARRDRDPTRDEATKSEATGQDPAHDKGQAKGKSSGGSSAHGPDKPKRPSSLLATNNVLKLKQIIPLQGKFLPGAGAAAGAGAGAGARSPQSPTGGENKLPAFLSFRFLRPPEARRDAAPEKAQSPTKPFNPGKLFGFGRSDGPGGNGGAAPQPRAGPSADAAPGKAQLSEDGAREDAENRAEEEGGGARL
SIO_010081: ANO8
subclass of: SO_0000673
so part of: ANO8
location: complement(join(50159..50647,51429..51599,51860..51970,52484..52615,53003..53194,53632..54270,54619..54762,55009..55083,55560..55615,55706..55832,56346..56498,56970..57152,57411..57538,57713..57829,58266..58362,58629..58767,59425..59557,60153..60263,62433..62532))
location: region:50159-62532:-1
so has part: feature:62433-62532:-1:exon
so has part: feature:60153-60263:-1:exon
so has part: feature:59425-59557:-1:exon
so has part: feature:58629-58767:-1:exon
so has part: feature:58266-58362:-1:exon
so has part: feature:57713-57829:-1:exon
so has part: feature:57411-57538:-1:exon
so has part: feature:56970-57152:-1:exon
so has part: feature:56346-56498:-1:exon
so has part: feature:55706-55832:-1:exon
so has part: feature:55560-55615:-1:exon
so has part: feature:55009-55083:-1:exon
so has part: feature:54619-54762:-1:exon
so has part: feature:53632-54270:-1:exon
so has part: feature:53003-53194:-1:exon
so has part: feature:52484-52615:-1:exon
so has part: feature:51860-51970:-1:exon
so has part: feature:51429-51599:-1:exon
so has part: feature:50159-50647:-1:exon

XP_041566849.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:62433-62532:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:60153-60263:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:59425-59557:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:58629-58767:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:58266-58362:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:57713-57829:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:57411-57538:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:56970-57152:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:56346-56498:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:55706-55832:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:55560-55615:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:55009-55083:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:54619-54762:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:53632-54270:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:53003-53194:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:52484-52615:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:51860-51970:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:51429-51599:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:50159-50647:-1:exon

ANO8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: ANO8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: anoctamin-8 isoform X1
translation: MPEPPTAAQDGERPRRAPAAEERAEPAAPTGVLDKLFGKRLLQAGRYIMSHKAWMKTVPTENCDVLMTFPDSTDDHTLLWLLNHIRLGIPELIVQVRHHRHTRVYAFFVTATYESLLRGADEMGLRKPVKAEFGGGMRGFSCEEDYIYENIENELGFFSSQERQSIIRYWLENLRAKQGESLHNIHFLEGQPIIPELAARGVIQQLFPLHEQRILKRLMKSWVQAVCEAQPLDDICDYFGVKIAMYFAWLGFYTSAMVYPAVFGSILYTFTDSDQSALSIPQTSQDISCVVFAIFNVVWATLFLEEWKRRGAEFAYKWGTLDTPAESLEEPRPQFRGTRRISPVTSAEEFYYPPWKRLLFQSLVSVPVCLACLAIVFLLMLGCFQLQEFVLSVQELPRVLRFLPKIILAVIVAACDELYKKVALWLNDMENYRLQSAYEKHLIIKIVLFQFVNSYLSLFYVGFYLKDMERLKELLLILSLSQSLARQLREALLPSILLHLHLSLIFLRRLLRLSWTLALSKMLATLLITRQLLQNVREVSQPQLQLGARSLRQLCRALLRRLGPQPPQPPQPPGPRGHKKCLNGGCGVPEEEEEEEEEEERRGSEAEEEGALDCGLRLRKVSFIERGERRAEPAGPGDEPFLEEGSPTMVEKGMDPAAVFELADDEEEEAEAQPGSPGRAEEPAVLARRRRREEEEGEEEGRKRNRASWIDPPEEDYSTQLTQAEVESCMKKYEDTFQDYQEMFIQFGYVVLFSSAFPLAAACALLNNVLEIRSDAFKLCTGLQRPFGQRVASIGQWQAVMEAMGVLAIVVNCYLLAQCGQLRRLCPWLSPEGAIVSVVVLEHFALLLKYVIQVAIPDIPAWVAEEMAKLEYQRREAFKKHERQAQHHFQQQQRRRREEEERQRQAELQARRDRDPTRDEATKSEATGQDPAHDKGQAKGKSSGGSSAHGPDKPKRPSSLLATNNVLKLKQIIPLQGKFLPGAGAAAGAGAGAGARSPQSPTGGENKLPAFLSFRFLRPPEARRDAAPEKAQSPTKPFNPGKLFGFGRSDGPGGNGGAAPQPRAGPSADAAPGKAQLSEDGAREDAENRAEEEGGGARL
SIO_010081: ANO8
subclass of: SO_0000673
so part of: ANO8
location: complement(join(50159..50647,51429..51602,51860..51970,52484..52615,53003..53194,53632..54270,54619..54762,55009..55083,55560..55615,55706..55832,56346..56498,56970..57152,57411..57538,57713..57829,58266..58362,58629..58767,59425..59557,60153..60263,62433..62532))
location: region:50159-62532:-1
so has part: feature:62433-62532:-1:exon
so has part: feature:60153-60263:-1:exon
so has part: feature:59425-59557:-1:exon
so has part: feature:58629-58767:-1:exon
so has part: feature:58266-58362:-1:exon
so has part: feature:57713-57829:-1:exon
so has part: feature:57411-57538:-1:exon
so has part: feature:56970-57152:-1:exon
so has part: feature:56346-56498:-1:exon
so has part: feature:55706-55832:-1:exon
so has part: feature:55560-55615:-1:exon
so has part: feature:55009-55083:-1:exon
so has part: feature:54619-54762:-1:exon
so has part: feature:53632-54270:-1:exon
so has part: feature:53003-53194:-1:exon
so has part: feature:52484-52615:-1:exon
so has part: feature:51860-51970:-1:exon
so has part: feature:51429-51602:-1:exon
so has part: feature:50159-50647:-1:exon

XP_030112704.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:62433-62532:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:60153-60263:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:59425-59557:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:58629-58767:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:58266-58362:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:57713-57829:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:57411-57538:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:56970-57152:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:56346-56498:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:55706-55832:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:55560-55615:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:55009-55083:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:54619-54762:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:53632-54270:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:53003-53194:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:52484-52615:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:51860-51970:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:51429-51602:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:50159-50647:-1:exon

ANO8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: ANO8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: anoctamin-8 isoform X5
translation: MSHKAWMKTVPTENCDVLMTFPDSTDDHTLLWLLNHIRLGIPELIVQVRHHRHTRVYAFFVTATYESLLRGADEMGLRKPVKAEFGGGMRGFSCEEDYIYENIENELGFFSSQERQSIIRYWLENLRAKQGESLHNIHFLEGQPIIPELAARGVIQQLFPLHEQRILKRLMKSWVQAVCEAQPLDDICDYFGVKIAMYFAWLGFYTSAMVYPAVFGSILYTFTDSDQSALSIPQTSQDISCVVFAIFNVVWATLFLEEWKRRGAEFAYKWGTLDTPAESLEEPRPQFRGTRRISPVTSAEEFYYPPWKRLLFQSLVSVPVCLACLAIVFLLMLGCFQLQEFVLSVQELPRVLRFLPKIILAVIVAACDELYKKVALWLNDMENYRLQSAYEKHLIIKIVLFQFVNSYLSLFYVGFYLKDMERLKELLLILSLSQSLARQLREALLPSILLHLHLSLIFLRRLLRLSWTLALSKMLATLLITRQLLQNVREVSQPQLQLGARSLRQLCRALLRRLGPQPPQPPQPPGPRGHKKCLNGGCGVPEEEEEEEEEEERRGSEAEEEGALDCGLRLRKVSFIERGERRAEPAGPGDEPFLEEGSPTMVEKGMDPAAVFELADDEEEEAEAQPGSPGRAEEPAVLARRRRREEEEGEEEGRKRNRASWIDPPEEDYSTQLTQAEVESCMKKYEDTFQDYQEMFIQFGYVVLFSSAFPLAAACALLNNVLEIRSDAFKLCTGLQRPFGQRVASIGQWQAVMEAMGVLAIVVNCYLLAQCGQLRRLCPWLSPEGAIVSVVVLEHFALLLKYVIQVAIPDIPAWVAEEMAKLEYQRREAFKKHERQAQHHFQQQQRRRREEEERQRQAELQARRDRDPTRDEATKSEATGQDPAHDKGQAKGKSSGGSSAHGPDKPKRPSSLLATNNVLKLKQIIPLQGKFLPGAGAAAGAGAGAGARSPQSPTGGENKLPAFLSFRFLRPPEARRDAAPEKAQSPTKPFNPGKLFGFGRSDGPGGNGGAAPQPRAGPSADAAPGKAQLSEDGAREDAENRAEEEGGGARL
SIO_010081: ANO8
subclass of: SO_0000673
so part of: ANO8
location: complement(join(50159..50647,51429..51602,51860..51970,52484..52615,53003..53194,53632..54270,54619..54762,55009..55083,55560..55615,55706..55832,56346..56498,56970..57152,57411..57538,57713..57829,58266..58362,58629..58767,59425..59557,60153..60219))
location: region:50159-60219:-1
so has part: feature:60153-60219:-1:exon
so has part: feature:59425-59557:-1:exon
so has part: feature:58629-58767:-1:exon
so has part: feature:58266-58362:-1:exon
so has part: feature:57713-57829:-1:exon
so has part: feature:57411-57538:-1:exon
so has part: feature:56970-57152:-1:exon
so has part: feature:56346-56498:-1:exon
so has part: feature:55706-55832:-1:exon
so has part: feature:55560-55615:-1:exon
so has part: feature:55009-55083:-1:exon
so has part: feature:54619-54762:-1:exon
so has part: feature:53632-54270:-1:exon
so has part: feature:53003-53194:-1:exon
so has part: feature:52484-52615:-1:exon
so has part: feature:51860-51970:-1:exon
so has part: feature:51429-51602:-1:exon
so has part: feature:50159-50647:-1:exon

XP_032599825.2
type: Protein
SIO_000068: ncbiprotein

position:60219:-1
position: 60219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60153-60219:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:59425-59557:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:58629-58767:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:58266-58362:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:57713-57829:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:57411-57538:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:56970-57152:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:56346-56498:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:55706-55832:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:55560-55615:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:55009-55083:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:54619-54762:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:53632-54270:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:53003-53194:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:52484-52615:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:51860-51970:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:51429-51602:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:50159-50647:-1:exon

GTPBP3
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: GTPBP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 64349..69207
location: region:64349-69207:1
so has part: feature:64349-69207:1:exon
subclass of: SO_0000010

115490844
type: Gene
SIO_000068: ncbigene

position:64349:1
position: 64349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:69207:1
position: 69207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64349-69207:1:exon

GTPBP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: GTPBP3
product: GTP binding protein 3, mitochondrial
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
transcript id: XM_030256856.3
SIO_010081: GTPBP3
subclass of: SO_0000673
so part of: GTPBP3
location: join(64349..64425,64836..65122,65439..65525,66040..66242,66370..66442,66735..66878,67465..67630,67983..68303,68905..69207)
location: region:64349-69207:1
so has part: feature:64349-64425:1:exon
so has part: feature:64836-65122:1:exon
so has part: feature:65439-65525:1:exon
so has part: feature:66040-66242:1:exon
so has part: feature:66370-66442:1:exon
so has part: feature:66735-66878:1:exon
so has part: feature:67465-67630:1:exon
so has part: feature:67983-68303:1:exon
so has part: feature:68905-69207:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:64349-64425:1:exon

position:64425:1
position: 64425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:64836-65122:1:exon

position:64836:1
position: 64836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:65122:1
position: 65122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:65439-65525:1:exon

position:65439:1
position: 65439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:65525:1
position: 65525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:66040-66242:1:exon

position:66040:1
position: 66040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:66242:1
position: 66242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:66370-66442:1:exon

position:66370:1
position: 66370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:66442:1
position: 66442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:66735-66878:1:exon

position:66735:1
position: 66735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:66878:1
position: 66878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:67465-67630:1:exon

position:67465:1
position: 67465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:67630:1
position: 67630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:67983-68303:1:exon

position:67983:1
position: 67983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:68303:1
position: 68303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:68905-69207:1:exon

position:68905:1
position: 68905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GTPBP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: GTPBP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA modification GTPase GTPBP3, mitochondrial
translation: MALSVAVRAARGRWARGLSSTVPPAGGTGGGTAGGTAGGTGDTIFALSSAPGRCGVAVIRASGPGSAGLLRSLTGTPGPPPPRVLALRRIRDPRSAETLDRGLVVWFPGPNSFTGEDCAELHVHGGPAVVSGVLQALGRLPGLRPAEPGEFTRRAFAHGKLDLTAAEGLRDLIAAETEAQRRQALRQMEGDLGRLYQRWSHALTQALAHLEAYIDFSEDDNVEEEVLARVAVTVRALLQEIRGHLRDGRRGELLRGGVRAVIAGPPNVGKSSLLNLLCRRPAAIVSPSAGTTRDVLEVALDIGGYPLLLSDTAGLRRAADPVEREGVRRARERLCQADLVLAVLDATSVSPAPAALGAALAALEPPPGTPCLLVLNKADLLGGPRGSAGGDQGPPAALLSCEGSPSATPAQGPPATLLSCKTGEGLEALLELLAQQLAQLCGDPLSGWPSLTQSRHSRHLGACAAALARFGDLGDSGDLALAAEQLRLARRELGRITGHVGAEDVLDIIFRDFCVGK
SIO_010081: GTPBP3
subclass of: SO_0000673
so part of: GTPBP3
location: join(64388..64425,64836..65122,65439..65525,66040..66242,66370..66442,66735..66878,67465..67630,67983..68303,68905..69139)
location: region:64388-69139:1
so has part: feature:64388-64425:1:exon
so has part: feature:64836-65122:1:exon
so has part: feature:65439-65525:1:exon
so has part: feature:66040-66242:1:exon
so has part: feature:66370-66442:1:exon
so has part: feature:66735-66878:1:exon
so has part: feature:67465-67630:1:exon
so has part: feature:67983-68303:1:exon
so has part: feature:68905-69139:1:exon

XP_030112716.3
type: Protein
SIO_000068: ncbiprotein

position:64388:1
position: 64388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:69139:1
position: 69139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64388-64425:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:64836-65122:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:65439-65525:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:66040-66242:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:66370-66442:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:66735-66878:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:67465-67630:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:67983-68303:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:68905-69139:1:exon

LOC115490803
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC115490803
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(70339..73213)
location: region:70339-73213:-1
so has part: feature:70339-73213:-1:exon
subclass of: SO_0000010

115490803
type: Gene
SIO_000068: ncbigene

position:70339:-1
position: 70339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:73213:-1
position: 73213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70339-73213:-1:exon

LOC115490803
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC115490803
product: plasmalemma vesicle associated protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_030256570.3
SIO_010081: LOC115490803
subclass of: SO_0000673
so part of: LOC115490803
location: complement(join(70339..70549,70633..70708,70856..70976,71478..72070,72276..72354,72744..73213))
location: region:70339-73213:-1
so has part: feature:72744-73213:-1:exon
so has part: feature:72276-72354:-1:exon
so has part: feature:71478-72070:-1:exon
so has part: feature:70856-70976:-1:exon
so has part: feature:70633-70708:-1:exon
so has part: feature:70339-70549:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:72744-73213:-1:exon

position:72744:-1
position: 72744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:72276-72354:-1:exon

position:72276:-1
position: 72276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:72354:-1
position: 72354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:71478-72070:-1:exon

position:71478:-1
position: 71478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:72070:-1
position: 72070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:70856-70976:-1:exon

position:70856:-1
position: 70856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:70976:-1
position: 70976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:70633-70708:-1:exon

position:70633:-1
position: 70633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:70708:-1
position: 70708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:70339-70549:-1:exon

position:70549:-1
position: 70549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115490803
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC115490803
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: plasmalemma vesicle-associated protein
translation: MEKSSFAMAKFGLEPKQAMPKRDCGFYLKYIFLFTSLIQFLIILGLVLFMVYGNAQAGTDTHLRLLEERVQSHYRRIVALDATNANLSRVLNATLKDKDKLQGLALKVQRELEKCNSSQASRSIPQLQELLFRQVRLTECQVITTLINTTCNAEKLQLQRQLDQASSSKKSLEDSGRQSQAQLAKATQERDRCQEELRSARTQEELSRMELEVQRHRCSSLQSDIGEKFPRIAELVKQLRCGEAEAELRQIRERVEGLLRRQQERDSQFVWRSSCELSVQQCRLNCSRDLQELRRSLQGLQQRQKDGEEEGKRLQAEKEKALKELEEKRKAAAALAESLREQLGVCMGTKMSQLDLPGSQALGSAGRSGSFPGTGTYMELLRSPATLGTMGMQNPAELQRMLQLIEQYTATLKNASG
SIO_010081: LOC115490803
subclass of: SO_0000673
so part of: LOC115490803
location: complement(join(70543..70549,70633..70708,70856..70976,71478..72070,72276..72354,72744..73121))
location: region:70543-73121:-1
so has part: feature:72744-73121:-1:exon
so has part: feature:72276-72354:-1:exon
so has part: feature:71478-72070:-1:exon
so has part: feature:70856-70976:-1:exon
so has part: feature:70633-70708:-1:exon
so has part: feature:70543-70549:-1:exon

XP_030112430.3
type: Protein
SIO_000068: ncbiprotein

position:70543:-1
position: 70543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:73121:-1
position: 73121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72744-73121:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:72276-72354:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:71478-72070:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:70856-70976:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:70633-70708:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:70543-70549:-1:exon

LOC115490806
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC115490806
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 72900..73373
location: region:72900-73373:1
so has part: feature:72900-73373:1:exon
subclass of: SO_0000011

115490806
type: Gene
SIO_000068: ncbigene

position:72900:1
position: 72900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:73373:1
position: 73373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72900-73373:1:exon

LOC115490806
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC115490806
product: uncharacterized LOC115490806
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 55 samples with support for all annotated introns
transcript id: XR_003956751.3
SIO_010081: LOC115490806
subclass of: SO_0000673
so part of: LOC115490806
location: join(72900..73040,73220..73373)
location: region:72900-73373:1
so has part: feature:72900-73040:1:exon
so has part: feature:73220-73373:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:72900-73040:1:exon

position:73040:1
position: 73040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:73220-73373:1:exon

position:73220:1
position: 73220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116806695
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC116806695
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(76482..78902)
location: region:76482-78902:-1
so has part: feature:76482-78902:-1:exon
subclass of: SO_0000010

116806695
type: Gene
SIO_000068: ncbigene

position:76482:-1
position: 76482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:78902:-1
position: 78902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:76482-78902:-1:exon

LOC116806695
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC116806695
product: coiled-coil domain-containing protein 194-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032743801.2
SIO_010081: LOC116806695
subclass of: SO_0000673
so part of: LOC116806695
location: complement(join(76482..76491,76709..76840,77097..77229,77319..77415,78525..78902))
location: region:76482-78902:-1
so has part: feature:78525-78902:-1:exon
so has part: feature:77319-77415:-1:exon
so has part: feature:77097-77229:-1:exon
so has part: feature:76709-76840:-1:exon
so has part: feature:76482-76491:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:78525-78902:-1:exon

position:78525:-1
position: 78525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:77319-77415:-1:exon

position:77319:-1
position: 77319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:77415:-1
position: 77415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:77097-77229:-1:exon

position:77097:-1
position: 77097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:77229:-1
position: 77229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:76709-76840:-1:exon

position:76709:-1
position: 76709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:76840:-1
position: 76840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:76482-76491:-1:exon

position:76491:-1
position: 76491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116806695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC116806695
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 194-like
translation: MDPAVPRATLKALGLSAALLLLVAAVTVAVAVLARRSEALGELRGCRERAANASRELGARLEELRRQRERLRRDGDALRRELARARGDSSRDSASLGSCRQRAARLEANVTALGDELAALRRERARLAGDKVALQEEAARGAEEARGLRRRLQEALEQQRELREHRERCEARQRELQDSLRDHAAELEALRRRGRDRGSGRRCPPGRYCWGDPGTGDSPERGTGKG
SIO_010081: LOC116806695
subclass of: SO_0000673
so part of: LOC116806695
location: complement(join(76482..76491,76709..76840,77097..77229,77319..77415,78525..78833))
location: region:76482-78833:-1
so has part: feature:78525-78833:-1:exon
so has part: feature:77319-77415:-1:exon
so has part: feature:77097-77229:-1:exon
so has part: feature:76709-76840:-1:exon
so has part: feature:76482-76491:-1:exon

XP_032599692.1
type: Protein
SIO_000068: ncbiprotein

position:78833:-1
position: 78833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78525-78833:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:77319-77415:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:77097-77229:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:76709-76840:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:76482-76491:-1:exon

CILP2
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: CILP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(84651..91461)
location: region:84651-91461:-1
so has part: feature:84651-91461:-1:exon
subclass of: SO_0000010

115490911
type: Gene
SIO_000068: ncbigene

position:84651:-1
position: 84651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:91461:-1
position: 91461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:84651-91461:-1:exon

CILP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: CILP2
product: cartilage intermediate layer protein 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 86% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041721611.1
SIO_010081: CILP2
subclass of: SO_0000673
so part of: CILP2
location: complement(join(84651..87145,87223..87380,87479..87587,87676..88230,88570..88752,89204..89464,91398..91461))
location: region:84651-91461:-1
so has part: feature:91398-91461:-1:exon
so has part: feature:89204-89464:-1:exon
so has part: feature:88570-88752:-1:exon
so has part: feature:87676-88230:-1:exon
so has part: feature:87479-87587:-1:exon
so has part: feature:87223-87380:-1:exon
so has part: feature:84651-87145:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:91398-91461:-1:exon

position:91398:-1
position: 91398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:89204-89464:-1:exon

position:89204:-1
position: 89204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:89464:-1
position: 89464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:88570-88752:-1:exon

position:88570:-1
position: 88570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:88752:-1
position: 88752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:87676-88230:-1:exon

position:87676:-1
position: 87676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:88230:-1
position: 88230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:87479-87587:-1:exon

position:87479:-1
position: 87479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:87587:-1
position: 87587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:87223-87380:-1:exon

position:87223:-1
position: 87223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:87380:-1
position: 87380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:84651-87145:-1:exon

position:87145:-1
position: 87145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CILP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: CILP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cartilage intermediate layer protein 2
translation: MAQLACLLAQLAMLAALALGAGEGTVWTPWFSIAPPGGAGGRRVPVTGRARLGARPCSRPVAIEARGGGRAPAPGLGASPAGGPRCPPRQRPPGTACASYRLRFLCPPDHPDWSPWSPWSPCSRSACGTRGTQSRSRRCRGARGPAVPPEPRCQGEATERRPCSAGPCPGIPVPVRDRGVITGPPQAGAGAQPIPVGNVPPEPGWTEWGAWGPCSRSCGRSGKRVRRRSCRDSGSRPCPGRASEAQRCPRPPCPGNGPGAPSAEPPAGCPGRTLRGTVRTAAGAALPGARVYLEGGPPVPLARSDARGRFTASGLCPGPAANLSAHRDGFAAAWAPIVTDGSGAAAAHLRLRRLEKPYMVLQPVDRVREAGQDVTFCCEASGTPAPHKYYWYHNGTLLEGSAERSRGRLALRALAPEQAGTYHCKASSEAGAIRSAPAQLTVLAQGQQSCRAEPEPSLVELPSECPQDATGSRYYNVGRCPASPCPGGPAEPSGCGGESGRCCGVRRMELRQVPCAGAALPLKVVAECGCGPCARPRALVQGRVTAADTGEPLRFGHIFLGGTQVGFTGYQGSFTIEVPPGTQRLVARFVDGQQRLVDAVKVLPFDRRGGAVYHEVKMLRKKEPVELDGGRSNAIPLGEAGGREPVGELLLPAGAFLRPSGEVFNGTVKASVTFVDPRDVATADAASSDLSFADADGEIVPLRTYGMFAVDFREGDSGAALQAGPVRVRMDAAQVRMPEHLQKMKLWSLNPESGLWEEEAELRPAGGSRRKREERTFLVGNLEIRERRLFNLDVPEDRRCFVKVRAYSNEKFNPYEQLEGVVVSLINLEPRPGFPSNPRAWGRFDSAVTGPNGACLPAFCDARRPDAYTALLSATLGGEELEAVASSPKLNPNAVGVAQPYLDKLGYRRSDHEDAALKKTAFQINVAKPDPNNADESNGPVYSYRSLRECEEAPVSANHLRFYRVEVDKYEYNVVPFKESDVTSWTGDFLAWWPNPQEFRACFIKVRLEGPQEYMVRSRNVGGTHPRTRGQLYGLRDSRSVRDPLLGDASAACLEFKCGGMLFDQGLADRTLVSVVPQGSCRRTAVNGLLRDYLSRHPPLADNNHTGAFSMLAPLDPLGHNYGIYTVTDQSPRLAKEIAIGRCFAGTSDGFSREMRAGEGTAVTFECQERPAGSESLFQRLLSAPAEALAEIRREMGRSELRRAPPEVMDFASGAPGPTPRTPGGQRRPARPRGRP
SIO_010081: CILP2
subclass of: SO_0000673
so part of: CILP2
location: complement(join(84765..87145,87223..87380,87479..87587,87676..88230,88570..88752,89204..89464,91398..91461))
location: region:84765-91461:-1
so has part: feature:91398-91461:-1:exon
so has part: feature:89204-89464:-1:exon
so has part: feature:88570-88752:-1:exon
so has part: feature:87676-88230:-1:exon
so has part: feature:87479-87587:-1:exon
so has part: feature:87223-87380:-1:exon
so has part: feature:84765-87145:-1:exon

XP_041577545.1
type: Protein
SIO_000068: ncbiprotein

position:84765:-1
position: 84765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:91398-91461:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:89204-89464:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:88570-88752:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:87676-88230:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:87479-87587:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:87223-87380:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:84765-87145:-1:exon

YJEFN3
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: YJEFN3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(92982..98996)
location: region:92982-98996:-1
so has part: feature:92982-98996:-1:exon
subclass of: SO_0000010

115490853
type: Gene
SIO_000068: ncbigene

position:92982:-1
position: 92982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:98996:-1
position: 98996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92982-98996:-1:exon

YJEFN3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: YJEFN3
product: YjeF N-terminal domain containing 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 72 samples with support for all annotated introns
transcript id: XM_030256878.3
SIO_010081: YJEFN3
subclass of: SO_0000673
so part of: YJEFN3
location: complement(join(92982..93605,93903..94056,94731..94844,94934..95044,96489..96597,98710..98996))
location: region:92982-98996:-1
so has part: feature:98710-98996:-1:exon
so has part: feature:96489-96597:-1:exon
so has part: feature:94934-95044:-1:exon
so has part: feature:94731-94844:-1:exon
so has part: feature:93903-94056:-1:exon
so has part: feature:92982-93605:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:98710-98996:-1:exon

position:98710:-1
position: 98710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:96489-96597:-1:exon

position:96489:-1
position: 96489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:96597:-1
position: 96597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:94934-95044:-1:exon

position:94934:-1
position: 94934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:95044:-1
position: 95044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:94731-94844:-1:exon

position:94731:-1
position: 94731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:94844:-1
position: 94844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:93903-94056:-1:exon

position:93903:-1
position: 93903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:94056:-1
position: 94056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:92982-93605:-1:exon

position:93605:-1
position: 93605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

YJEFN3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: YJEFN3
product: YjeF N-terminal domain containing 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 73 samples with support for all annotated introns
transcript id: XM_032743841.2
SIO_010081: YJEFN3
subclass of: SO_0000673
so part of: YJEFN3
location: complement(join(92982..93605,93903..94056,94731..94844,94934..95044,96489..96601,98710..98756))
location: region:92982-98756:-1
so has part: feature:98710-98756:-1:exon
so has part: feature:96489-96601:-1:exon
so has part: feature:94934-95044:-1:exon
so has part: feature:94731-94844:-1:exon
so has part: feature:93903-94056:-1:exon
so has part: feature:92982-93605:-1:exon

position:98756:-1
position: 98756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:98710-98756:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:96489-96601:-1:exon

position:96601:-1
position: 96601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:94934-95044:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:94731-94844:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:93903-94056:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:92982-93605:-1:exon

YJEFN3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: YJEFN3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: yjeF N-terminal domain-containing protein 3 isoform X1
translation: MSSAPCPPREPPRYLSRAEAEAMEKELLEDYRFGRQQLIEIWGHACAVAVTKAFPLPSLPRRQPTLLVACGPAQNGAIGLVCARHLRSFDYEPTIFYPKRSPDPLHRDFTTQCEKMDIPFLSYLPTEVQLINDAYNAVVDAVLGAEGTEGTAGTEPCAAILATLRLVRIPIVSLDVPSGWAAGPGGSGDISPDVLVSLAAPKEVARRFQGRRHFLAGRFVPEELQRKFGISPREYPGSDCVVAL
SIO_010081: YJEFN3
subclass of: SO_0000673
so part of: YJEFN3
location: complement(join(93406..93605,93903..94056,94731..94844,94934..95044,96489..96597,98710..98756))
location: region:93406-98756:-1
so has part: feature:98710-98756:-1:exon
so has part: feature:96489-96597:-1:exon
so has part: feature:94934-95044:-1:exon
so has part: feature:94731-94844:-1:exon
so has part: feature:93903-94056:-1:exon
so has part: feature:93406-93605:-1:exon

XP_030112738.1
type: Protein
SIO_000068: ncbiprotein

position:93406:-1
position: 93406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:98710-98756:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:96489-96597:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:94934-95044:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:94731-94844:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:93903-94056:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:93406-93605:-1:exon

YJEFN3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: YJEFN3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: yjeF N-terminal domain-containing protein 3 isoform X2
translation: MEKELLEDYRFGRQQLIEIWGHACAVAVTKAFPLPSLPRRQPTLLVACGPAQNGAIGLVCARHLRSFDYEPTIFYPKRSPDPLHRDFTTQCEKMDIPFLSYLPTEVQLINDAYNAVVDAVLGAEGTEGTAGTEPCAAILATLRLVRIPIVSLDVPSGWAAGPGGSGDISPDVLVSLAAPKEVARRFQGRRHFLAGRFVPEELQRKFGISPREYPGSDCVVAL
SIO_010081: YJEFN3
subclass of: SO_0000673
so part of: YJEFN3
location: complement(join(93406..93605,93903..94056,94731..94844,94934..95044,96489..96578))
location: region:93406-96578:-1
so has part: feature:96489-96578:-1:exon
so has part: feature:94934-95044:-1:exon
so has part: feature:94731-94844:-1:exon
so has part: feature:93903-94056:-1:exon
so has part: feature:93406-93605:-1:exon

XP_032599732.1
type: Protein
SIO_000068: ncbiprotein

position:96578:-1
position: 96578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:96489-96578:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:94934-95044:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:94731-94844:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:93903-94056:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:93406-93605:-1:exon

NDUFA13
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: NDUFA13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(99181..101438)
location: region:99181-101438:-1
so has part: feature:99181-101438:-1:exon
subclass of: SO_0000010

115490854
type: Gene
SIO_000068: ncbigene

position:99181:-1
position: 99181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:101438:-1
position: 101438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:99181-101438:-1:exon

NDUFA13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: NDUFA13
product: NADH:ubiquinone oxidoreductase subunit A13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 6 long SRA reads, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 159 samples with support for all annotated introns
transcript id: XM_041710950.1
SIO_010081: NDUFA13
subclass of: SO_0000673
so part of: NDUFA13
location: complement(join(99181..99475,100256..100325,100623..100694,101031..101109,101292..101438))
location: region:99181-101438:-1
so has part: feature:101292-101438:-1:exon
so has part: feature:101031-101109:-1:exon
so has part: feature:100623-100694:-1:exon
so has part: feature:100256-100325:-1:exon
so has part: feature:99181-99475:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:101292-101438:-1:exon

position:101292:-1
position: 101292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:101031-101109:-1:exon

position:101031:-1
position: 101031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:101109:-1
position: 101109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:100623-100694:-1:exon

position:100623:-1
position: 100623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:100694:-1
position: 100694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:100256-100325:-1:exon

position:100256:-1
position: 100256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:100325:-1
position: 100325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:99181-99475:-1:exon

position:99475:-1
position: 99475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NDUFA13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: NDUFA13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13
translation: MAAPKVKQDMAPPGGYGPIDYRRHLPRRGLSGYSLFALGAGSLLLGYYTLVKWNRERRRLLIEELEARIALMPLLQAESDRRTLRMLRENLEEEAKIMRDVPGWKVGESRFHTERWVPPTLEELYFLRPRSELEREKFGLQNYV
SIO_010081: NDUFA13
subclass of: SO_0000673
so part of: NDUFA13
location: complement(join(99356..99475,100256..100325,100623..100694,101031..101109,101292..101385))
location: region:99356-101385:-1
so has part: feature:101292-101385:-1:exon
so has part: feature:101031-101109:-1:exon
so has part: feature:100623-100694:-1:exon
so has part: feature:100256-100325:-1:exon
so has part: feature:99356-99475:-1:exon

XP_041566884.1
type: Protein
SIO_000068: ncbiprotein

position:99356:-1
position: 99356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:101385:-1
position: 101385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:101292-101385:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:101031-101109:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:100623-100694:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:100256-100325:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:99356-99475:-1:exon

GATAD2A
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: GATAD2A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(103116..123115)
location: region:103116-123115:-1
so has part: feature:103116-123115:-1:exon
subclass of: SO_0000010

115490843
type: Gene
SIO_000068: ncbigene

position:103116:-1
position: 103116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:123115:-1
position: 123115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:103116-123115:-1:exon

GATAD2A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: GATAD2A
product: GATA zinc finger domain containing 2A
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_032743837.2
SIO_010081: GATAD2A
subclass of: SO_0000673
so part of: GATAD2A
location: complement(join(103116..106531,107492..107666,108231..108520,109203..109482,110004..110171,110940..111072,112581..112673,113493..113621,114337..114466,115001..115263,119459..119509,122884..123115))
location: region:103116-123115:-1
so has part: feature:122884-123115:-1:exon
so has part: feature:119459-119509:-1:exon
so has part: feature:115001-115263:-1:exon
so has part: feature:114337-114466:-1:exon
so has part: feature:113493-113621:-1:exon
so has part: feature:112581-112673:-1:exon
so has part: feature:110940-111072:-1:exon
so has part: feature:110004-110171:-1:exon
so has part: feature:109203-109482:-1:exon
so has part: feature:108231-108520:-1:exon
so has part: feature:107492-107666:-1:exon
so has part: feature:103116-106531:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:122884-123115:-1:exon

position:122884:-1
position: 122884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:119459-119509:-1:exon

position:119459:-1
position: 119459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:119509:-1
position: 119509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:115001-115263:-1:exon

position:115001:-1
position: 115001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:115263:-1
position: 115263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:114337-114466:-1:exon

position:114337:-1
position: 114337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:114466:-1
position: 114466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:113493-113621:-1:exon

position:113493:-1
position: 113493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:113621:-1
position: 113621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:112581-112673:-1:exon

position:112581:-1
position: 112581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:112673:-1
position: 112673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:110940-111072:-1:exon

position:110940:-1
position: 110940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:111072:-1
position: 111072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:110004-110171:-1:exon

position:110004:-1
position: 110004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:110171:-1
position: 110171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:109203-109482:-1:exon

position:109203:-1
position: 109203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:109482:-1
position: 109482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:108231-108520:-1:exon

position:108231:-1
position: 108231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:108520:-1
position: 108520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:107492-107666:-1:exon

position:107492:-1
position: 107492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:107666:-1
position: 107666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:103116-106531:-1:exon

position:106531:-1
position: 106531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GATAD2A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: GATAD2A
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: transcriptional repressor p66-alpha
translation: MSEDSCRTRSQKRALERESEPDNKKLRMDKGILGSDLGSEGDVKIKADPGAGKIPGMLKSGEVKATIKVELPAGDEPVDMSTSKGECRRERRVPSPDVIVLSDNEPSSPRLNGLARLGLPEPGAEALLRSPEQRERLIKQLQEELRLEEAKLVLLKKLRQSQSQKETPAPKLSSGPSGSSAATPPPLVRGPQAVPAGKTSLQPSSSRIPGTGIPPPLLRGGQAAASKLGSQQSPQIVMPPLVRGAQQIHTIRQHSSTGPPPLLLAPRASVPSVQIQGQRIIQQGLIRVANVPNASLLVNIPQASPTSLKGSAVSSGQAGAAPAGGAALGGAGEAPGSRQAAAKLALRKQLEKTLLEIPPPKPPAPEMNFLPSAANNEFIYLVGLEEVVQNLLESQGKVAVAVSCREPYLCAQCHTDFTCRWREEKNGTIMCETCMASNQKKALKAEHTNRLKAAFVKALQQEQEIEQRILQQAAPPGQPKAEPMGQHHALKQSSGQMSRGASRGVLHAFSSSPKLQSSSGGAALGGRPGKHAERAGGKGGAAWKKNPIGTGGALPFVSPSLAVHKSASAVDRQREYLLDMIPPRSIPQSATWK
SIO_010081: GATAD2A
subclass of: SO_0000673
so part of: GATAD2A
location: complement(join(106401..106531,107492..107666,108231..108520,109203..109482,110004..110171,110940..111072,112581..112673,113493..113621,114337..114466,115001..115254))
location: region:106401-115254:-1
so has part: feature:115001-115254:-1:exon
so has part: feature:114337-114466:-1:exon
so has part: feature:113493-113621:-1:exon
so has part: feature:112581-112673:-1:exon
so has part: feature:110940-111072:-1:exon
so has part: feature:110004-110171:-1:exon
so has part: feature:109203-109482:-1:exon
so has part: feature:108231-108520:-1:exon
so has part: feature:107492-107666:-1:exon
so has part: feature:106401-106531:-1:exon

XP_032599728.2
type: Protein
SIO_000068: ncbiprotein

position:106401:-1
position: 106401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:115254:-1
position: 115254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:115001-115254:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:114337-114466:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:113493-113621:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:112581-112673:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:110940-111072:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:110004-110171:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:109203-109482:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:108231-108520:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:107492-107666:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:106401-106531:-1:exon

MAU2
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: MAU2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(129582..143970)
location: region:129582-143970:-1
so has part: feature:129582-143970:-1:exon
subclass of: SO_0000010

100224279
type: Gene
SIO_000068: ncbigene

position:129582:-1
position: 129582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:143970:-1
position: 143970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:129582-143970:-1:exon

MAU2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: MAU2
product: MAU2 sister chromatid cohesion factor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 1 long SRA read, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 110 samples with support for all annotated introns
transcript id: XM_030256855.3
SIO_010081: MAU2
subclass of: SO_0000673
so part of: MAU2
location: complement(join(129582..131744,132353..132480,133056..133146,134006..134117,134735..134812,135027..135076,136443..136526,136755..136820,137444..137521,138443..138546,138811..138901,139737..139883,140305..140460,140940..140967,141298..141392,142319..142414,143116..143181,143429..143446,143687..143970))
location: region:129582-143970:-1
so has part: feature:143687-143970:-1:exon
so has part: feature:143429-143446:-1:exon
so has part: feature:143116-143181:-1:exon
so has part: feature:142319-142414:-1:exon
so has part: feature:141298-141392:-1:exon
so has part: feature:140940-140967:-1:exon
so has part: feature:140305-140460:-1:exon
so has part: feature:139737-139883:-1:exon
so has part: feature:138811-138901:-1:exon
so has part: feature:138443-138546:-1:exon
so has part: feature:137444-137521:-1:exon
so has part: feature:136755-136820:-1:exon
so has part: feature:136443-136526:-1:exon
so has part: feature:135027-135076:-1:exon
so has part: feature:134735-134812:-1:exon
so has part: feature:134006-134117:-1:exon
so has part: feature:133056-133146:-1:exon
so has part: feature:132353-132480:-1:exon
so has part: feature:129582-131744:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:143687-143970:-1:exon

position:143687:-1
position: 143687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:143429-143446:-1:exon

position:143429:-1
position: 143429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:143446:-1
position: 143446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:143116-143181:-1:exon

position:143116:-1
position: 143116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:143181:-1
position: 143181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:142319-142414:-1:exon

position:142319:-1
position: 142319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:142414:-1
position: 142414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:141298-141392:-1:exon

position:141298:-1
position: 141298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:141392:-1
position: 141392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:140940-140967:-1:exon

position:140940:-1
position: 140940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:140967:-1
position: 140967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:140305-140460:-1:exon

position:140305:-1
position: 140305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:140460:-1
position: 140460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:139737-139883:-1:exon

position:139737:-1
position: 139737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:139883:-1
position: 139883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:138811-138901:-1:exon

position:138811:-1
position: 138811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:138901:-1
position: 138901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:138443-138546:-1:exon

position:138443:-1
position: 138443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:138546:-1
position: 138546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:137444-137521:-1:exon

position:137444:-1
position: 137444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:137521:-1
position: 137521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:136755-136820:-1:exon

position:136755:-1
position: 136755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:136820:-1
position: 136820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:136443-136526:-1:exon

position:136443:-1
position: 136443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:136526:-1
position: 136526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:135027-135076:-1:exon

position:135027:-1
position: 135027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:135076:-1
position: 135076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:134735-134812:-1:exon

position:134735:-1
position: 134735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:134812:-1
position: 134812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:134006-134117:-1:exon

position:134006:-1
position: 134006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:134117:-1
position: 134117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:133056-133146:-1:exon

position:133056:-1
position: 133056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:133146:-1
position: 133146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:132353-132480:-1:exon

position:132353:-1
position: 132353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:132480:-1
position: 132480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:129582-131744:-1:exon

position:131744:-1
position: 131744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MAU2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: MAU2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MAU2 chromatid cohesion factor homolog
translation: MEARTHLQLGSVLYHHTRNGDQARGHLEKAWLISQQIPQFEDVKFEAASLLSELYCQENSVDTAKPLLRKAIQISQQTPYWHCRLLFQLAQLHTLEKDLVSACDLLGVGAEYARVVGSEYTRALFLLSKGMLLLMERKLQEVHPLLTLCGQIVENWQGNPIQKESLRVFFLVLQVTHYLDAGQVKSVKPCLKQLQQCIQTISTLHDDEILPSNPADLFHWLPKEHMCVLVYLVTVMHSMQAGYLEKAQKYTDKALMQLEKLKMLDCSPILSSFQVILLEHIIMCRLVTGHKATALQEISQVCQLCQQSPRLFSNHAAQLHTLLGLYCISVNCMDNAEAQFTTALRLTTHQELWAFIVTNLASVYIREGNRHQELYSLLERINPDHNFPVSSHCLRAAAFYIRGLFSFFQGRYNEAKRFLRETLKMSNAEDLNRLTACSLVLLGHIFYVLGNHRESNNMVVPAMQLASKIPDMSVQLWSSALLRDLNKACGNAMDAHEAAQMHQNFSQQLLQDHIEACSLPEHNLITWTDGPPPVQFQAQNGPTTSLASLL
SIO_010081: MAU2
subclass of: SO_0000673
so part of: MAU2
location: complement(join(131670..131744,132353..132480,133056..133146,134006..134117,134735..134812,135027..135076,136443..136526,136755..136820,137444..137521,138443..138546,138811..138901,139737..139883,140305..140460,140940..140967,141298..141392,142319..142414,143116..143181,143429..143446,143687..143776))
location: region:131670-143776:-1
so has part: feature:143687-143776:-1:exon
so has part: feature:143429-143446:-1:exon
so has part: feature:143116-143181:-1:exon
so has part: feature:142319-142414:-1:exon
so has part: feature:141298-141392:-1:exon
so has part: feature:140940-140967:-1:exon
so has part: feature:140305-140460:-1:exon
so has part: feature:139737-139883:-1:exon
so has part: feature:138811-138901:-1:exon
so has part: feature:138443-138546:-1:exon
so has part: feature:137444-137521:-1:exon
so has part: feature:136755-136820:-1:exon
so has part: feature:136443-136526:-1:exon
so has part: feature:135027-135076:-1:exon
so has part: feature:134735-134812:-1:exon
so has part: feature:134006-134117:-1:exon
so has part: feature:133056-133146:-1:exon
so has part: feature:132353-132480:-1:exon
so has part: feature:131670-131744:-1:exon

XP_030112715.1
type: Protein
SIO_000068: ncbiprotein

position:131670:-1
position: 131670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:143776:-1
position: 143776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:143687-143776:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:143429-143446:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:143116-143181:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:142319-142414:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:141298-141392:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:140940-140967:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:140305-140460:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:139737-139883:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:138811-138901:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:138443-138546:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:137444-137521:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:136755-136820:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:136443-136526:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:135027-135076:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:134735-134812:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:134006-134117:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:133056-133146:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:132353-132480:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:131670-131744:-1:exon

SUGP1
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: SUGP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 144227..159073
location: region:144227-159073:1
so has part: feature:144227-159073:1:exon
subclass of: SO_0000010

100221359
type: Gene
SIO_000068: ncbigene

position:144227:1
position: 144227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:159073:1
position: 159073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:144227-159073:1:exon

SUGP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: SUGP1
product: SURP and G-patch domain containing 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 49 samples with support for all annotated introns
transcript id: XM_041710970.1
SIO_010081: SUGP1
subclass of: SO_0000673
so part of: SUGP1
location: join(144227..144458,145857..146028,146581..146684,147140..147231,147389..147521,149938..150061,150667..150770,151945..152068,152607..153217,153491..153597,154484..154661,155353..155459,156135..156280,157112..157241,158454..159073)
location: region:144227-159073:1
so has part: feature:144227-144458:1:exon
so has part: feature:145857-146028:1:exon
so has part: feature:146581-146684:1:exon
so has part: feature:147140-147231:1:exon
so has part: feature:147389-147521:1:exon
so has part: feature:149938-150061:1:exon
so has part: feature:150667-150770:1:exon
so has part: feature:151945-152068:1:exon
so has part: feature:152607-153217:1:exon
so has part: feature:153491-153597:1:exon
so has part: feature:154484-154661:1:exon
so has part: feature:155353-155459:1:exon
so has part: feature:156135-156280:1:exon
so has part: feature:157112-157241:1:exon
so has part: feature:158454-159073:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:144227-144458:1:exon

position:144458:1
position: 144458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:145857-146028:1:exon

position:145857:1
position: 145857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:146028:1
position: 146028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:146581-146684:1:exon

position:146581:1
position: 146581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:146684:1
position: 146684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:147140-147231:1:exon

position:147140:1
position: 147140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:147231:1
position: 147231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:147389-147521:1:exon

position:147389:1
position: 147389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:147521:1
position: 147521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:149938-150061:1:exon

position:149938:1
position: 149938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:150061:1
position: 150061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:150667-150770:1:exon

position:150667:1
position: 150667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:150770:1
position: 150770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:151945-152068:1:exon

position:151945:1
position: 151945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:152068:1
position: 152068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:152607-153217:1:exon

position:152607:1
position: 152607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:153217:1
position: 153217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:153491-153597:1:exon

position:153491:1
position: 153491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:153597:1
position: 153597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:154484-154661:1:exon

position:154484:1
position: 154484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:154661:1
position: 154661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:155353-155459:1:exon

position:155353:1
position: 155353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:155459:1
position: 155459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:156135-156280:1:exon

position:156135:1
position: 156135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:156280:1
position: 156280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:157112-157241:1:exon

position:157112:1
position: 157112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:157241:1
position: 157241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:158454-159073:1:exon

position:158454:1
position: 158454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SUGP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: SUGP1
product: SURP and G-patch domain containing 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 4 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 56 samples with support for all annotated introns
transcript id: XM_041710968.1
SIO_010081: SUGP1
subclass of: SO_0000673
so part of: SUGP1
location: join(144227..144458,145857..146028,146581..146684,147297..147521,149938..150061,150667..150770,151945..152068,152607..153217,153491..153597,154484..154661,155353..155459,156135..156280,157112..157241,158454..159073)
location: region:144227-159073:1
so has part: feature:144227-144458:1:exon
so has part: feature:145857-146028:1:exon
so has part: feature:146581-146684:1:exon
so has part: feature:147297-147521:1:exon
so has part: feature:149938-150061:1:exon
so has part: feature:150667-150770:1:exon
so has part: feature:151945-152068:1:exon
so has part: feature:152607-153217:1:exon
so has part: feature:153491-153597:1:exon
so has part: feature:154484-154661:1:exon
so has part: feature:155353-155459:1:exon
so has part: feature:156135-156280:1:exon
so has part: feature:157112-157241:1:exon
so has part: feature:158454-159073:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:144227-144458:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:145857-146028:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:146581-146684:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:147297-147521:1:exon

position:147297:1
position: 147297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:149938-150061:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:150667-150770:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:151945-152068:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:152607-153217:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:153491-153597:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:154484-154661:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:155353-155459:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:156135-156280:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:157112-157241:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:158454-159073:1:exon

SUGP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: SUGP1
product: SURP and G-patch domain containing 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 1 long SRA read, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 48 samples with support for all annotated introns
transcript id: XM_041710971.1
SIO_010081: SUGP1
subclass of: SO_0000673
so part of: SUGP1
location: join(144227..144458,145857..146028,146581..146684,147297..147521,149938..150061,150667..150770,151957..152068,152607..153217,153491..153597,154484..154661,155353..155459,156135..156280,157112..157241,158454..159073)
location: region:144227-159073:1
so has part: feature:144227-144458:1:exon
so has part: feature:145857-146028:1:exon
so has part: feature:146581-146684:1:exon
so has part: feature:147297-147521:1:exon
so has part: feature:149938-150061:1:exon
so has part: feature:150667-150770:1:exon
so has part: feature:151957-152068:1:exon
so has part: feature:152607-153217:1:exon
so has part: feature:153491-153597:1:exon
so has part: feature:154484-154661:1:exon
so has part: feature:155353-155459:1:exon
so has part: feature:156135-156280:1:exon
so has part: feature:157112-157241:1:exon
so has part: feature:158454-159073:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:144227-144458:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:145857-146028:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:146581-146684:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:147297-147521:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:149938-150061:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:150667-150770:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:151957-152068:1:exon

position:151957:1
position: 151957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:152607-153217:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:153491-153597:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:154484-154661:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:155353-155459:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:156135-156280:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:157112-157241:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:158454-159073:1:exon

SUGP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: SUGP1
product: SURP and G-patch domain containing 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
transcript id: XM_041710972.1
SIO_010081: SUGP1
subclass of: SO_0000673
so part of: SUGP1
location: join(144227..144458,145857..146028,146581..146684,147297..147521,149950..150061,150667..150770,151945..152068,152607..153217,153491..153597,154484..154661,155353..155459,156135..156280,157112..157241,158454..159073)
location: region:144227-159073:1
so has part: feature:144227-144458:1:exon
so has part: feature:145857-146028:1:exon
so has part: feature:146581-146684:1:exon
so has part: feature:147297-147521:1:exon
so has part: feature:149950-150061:1:exon
so has part: feature:150667-150770:1:exon
so has part: feature:151945-152068:1:exon
so has part: feature:152607-153217:1:exon
so has part: feature:153491-153597:1:exon
so has part: feature:154484-154661:1:exon
so has part: feature:155353-155459:1:exon
so has part: feature:156135-156280:1:exon
so has part: feature:157112-157241:1:exon
so has part: feature:158454-159073:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:144227-144458:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:145857-146028:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:146581-146684:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:147297-147521:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:149950-150061:1:exon

position:149950:1
position: 149950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:150667-150770:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:151945-152068:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:152607-153217:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:153491-153597:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:154484-154661:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:155353-155459:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:156135-156280:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:157112-157241:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:158454-159073:1:exon

SUGP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: SUGP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SURP and G-patch domain-containing protein 1 isoform X2
translation: MTVAAEPPERGDSAAPPAGLGAAGGAGRAAGWRPEGLHLPGALALARPLARRARRGARWEGGSKMDNHRDAPGKASRWFGVSQSKSAKTSVNILQQEELIAQKKREIEARLEQQARQNSLSIPQLPLLGDDDGSESEASVSNKFVNDGSFLQQFLKLQREKSNAENAPNPPNSTGSAPTPQPGKKPALLGKRPGQALSRMLQARSLSLPKPSPVLSRLSVFQGPDEDEEEDYEQWLEIKVLPPEDSETRQVVEKLARFVAEGGPELEKVAMEDYKDNPAFSFLHDKNSREFLYYRKKVAEIRKENQNSQAASSQKVSPPADQETRNSAEKLAQFVAAGGPEVEAIALQNNRENPAFRFLYEPHSKGHRYYRQKLEEFRRARAAPGNPPFSGNPPFSGNPPFSGNPPFPGNPPFPGGSPFPGDSGLKRKSSPEASPSPLCFPPLPVPVPSPLPIPIPVPPPLPLPVPSPVLPAALPVPSASPAPSSSSTSPPDQLAPNSAPIPNPATTPNPSVTPNPGPIPSPAPGSTKKKRKSRWGPEEEKVELPLPQLVQQLDSPSPLSVQDLKGLGYEKGKPVGLVGVTELSEAQKKQLKEQQEMQQMYDMIMKHKRAMQEMQLLWERALQQHQHGYDSDEEVDSELGTWEHRLRRMEMDKTREWAEQLTQMGRGKHFIGDFLPPDELEKFMETFKALKEGREPDYSEYKEFKLTVENIGYQMLMKMGWKEGEGLGSDGQGIKNPVSKGTTTMDGAGFGIERPAELTKEDDEYEAFRKRMMLAYRFRPNPLNNPRRPYY
SIO_010081: SUGP1
subclass of: SO_0000673
so part of: SUGP1
location: join(144242..144458,145857..146028,146581..146684,147140..147231,147389..147521,149938..150061,150667..150770,151945..152068,152607..153217,153491..153597,154484..154661,155353..155459,156135..156280,157112..157241,158454..158480)
location: region:144242-158480:1
so has part: feature:144242-144458:1:exon
so has part: feature:145857-146028:1:exon
so has part: feature:146581-146684:1:exon
so has part: feature:147140-147231:1:exon
so has part: feature:147389-147521:1:exon
so has part: feature:149938-150061:1:exon
so has part: feature:150667-150770:1:exon
so has part: feature:151945-152068:1:exon
so has part: feature:152607-153217:1:exon
so has part: feature:153491-153597:1:exon
so has part: feature:154484-154661:1:exon
so has part: feature:155353-155459:1:exon
so has part: feature:156135-156280:1:exon
so has part: feature:157112-157241:1:exon
so has part: feature:158454-158480:1:exon

XP_041566904.1
type: Protein
SIO_000068: ncbiprotein

position:144242:1
position: 144242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:158480:1
position: 158480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:144242-144458:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:145857-146028:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:146581-146684:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:147140-147231:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:147389-147521:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:149938-150061:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:150667-150770:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:151945-152068:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:152607-153217:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:153491-153597:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:154484-154661:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:155353-155459:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:156135-156280:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:157112-157241:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:158454-158480:1:exon

SUGP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: SUGP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SURP and G-patch domain-containing protein 1 isoform X1
translation: MTVAAEPPERGDSAAPPAGLGAAGGAGRAAGWRPEGLHLPGALALARPLARRARRGARWEGGSKMDNHRDAPGKASRWFGVSQSKSAKTSVNILQQEELIAQKKREIEARLEQQARQNSLSIPQLPLLGDDDGSESEASVSNKFVNDGSFLQQFLKLQREKSNAENAPNPPNSTGSTPTPQPGKKPALLGKRPGQALSRMLQARSLSLPKPSPVLSRLSVFQGPDEDEEEDYEQWLEIKVLPPEDSETRQVVEKLARFVAEGGPELEKVAMEDYKDNPAFSFLHDKNSREFLYYRKKVAEIRKENQNSQAASSQKVSPPADQETRNSAEKLAQFVAAGGPEVEAIALQNNRENPAFRFLYEPHSKGHRYYRQKLEEFRRARAAPGNPPFSGNPPFSGNPPFSGNPPFPGNPPFPGGSPFPGDSGLKRKSSPEASPSPLCFPPLPVPVPSPLPIPIPVPPPLPLPVPSPVLPAALPVPSASPAPSSSSTSPPDQLAPNSAPIPNPATTPNPSVTPNPGPIPSPAPGSTKKKRKSRWGPEEEKVELPLPQLVQQLDSPSPLSVQDLKGLGYEKGKPVGLVGVTELSEAQKKQLKEQQEMQQMYDMIMKHKRAMQEMQLLWERALQQHQHGYDSDEEVDSELGTWEHRLRRMEMDKTREWAEQLTQMGRGKHFIGDFLPPDELEKFMETFKALKEGREPDYSEYKEFKLTVENIGYQMLMKMGWKEGEGLGSDGQGIKNPVSKGTTTMDGAGFGIERPAELTKEDDEYEAFRKRMMLAYRFRPNPLNNPRRPYY
SIO_010081: SUGP1
subclass of: SO_0000673
so part of: SUGP1
location: join(144242..144458,145857..146028,146581..146684,147297..147521,149938..150061,150667..150770,151945..152068,152607..153217,153491..153597,154484..154661,155353..155459,156135..156280,157112..157241,158454..158480)
location: region:144242-158480:1
so has part: feature:144242-144458:1:exon
so has part: feature:145857-146028:1:exon
so has part: feature:146581-146684:1:exon
so has part: feature:147297-147521:1:exon
so has part: feature:149938-150061:1:exon
so has part: feature:150667-150770:1:exon
so has part: feature:151945-152068:1:exon
so has part: feature:152607-153217:1:exon
so has part: feature:153491-153597:1:exon
so has part: feature:154484-154661:1:exon
so has part: feature:155353-155459:1:exon
so has part: feature:156135-156280:1:exon
so has part: feature:157112-157241:1:exon
so has part: feature:158454-158480:1:exon

XP_041566902.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:144242-144458:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:145857-146028:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:146581-146684:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:147297-147521:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:149938-150061:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:150667-150770:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:151945-152068:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:152607-153217:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:153491-153597:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:154484-154661:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:155353-155459:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:156135-156280:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:157112-157241:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:158454-158480:1:exon

SUGP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: SUGP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SURP and G-patch domain-containing protein 1 isoform X3
translation: MTVAAEPPERGDSAAPPAGLGAAGGAGRAAGWRPEGLHLPGALALARPLARRARRGARWEGGSKMDNHRDAPGKASRWFGVSQSKSAKTSVNILQQEELIAQKKREIEARLEQQARQNSLSIPQLPLLGDDDGSESEASVSNKFVNDGSFLQQFLKLQREKSNAENAPNPPNSTGSTPTPQPGKKPALLGKRPGQALSRMLQARSLSLPKPSPVLSRLSVFQGPDEDEEEDYEQWLEIKVLPPEDSETRQVVEKLARFVAEGGPELEKVAMEDYKDNPAFSFLHDKNSREFLYYRKKVAEIRKENQNSQAASSQKADQETRNSAEKLAQFVAAGGPEVEAIALQNNRENPAFRFLYEPHSKGHRYYRQKLEEFRRARAAPGNPPFSGNPPFSGNPPFSGNPPFPGNPPFPGGSPFPGDSGLKRKSSPEASPSPLCFPPLPVPVPSPLPIPIPVPPPLPLPVPSPVLPAALPVPSASPAPSSSSTSPPDQLAPNSAPIPNPATTPNPSVTPNPGPIPSPAPGSTKKKRKSRWGPEEEKVELPLPQLVQQLDSPSPLSVQDLKGLGYEKGKPVGLVGVTELSEAQKKQLKEQQEMQQMYDMIMKHKRAMQEMQLLWERALQQHQHGYDSDEEVDSELGTWEHRLRRMEMDKTREWAEQLTQMGRGKHFIGDFLPPDELEKFMETFKALKEGREPDYSEYKEFKLTVENIGYQMLMKMGWKEGEGLGSDGQGIKNPVSKGTTTMDGAGFGIERPAELTKEDDEYEAFRKRMMLAYRFRPNPLNNPRRPYY
SIO_010081: SUGP1
subclass of: SO_0000673
so part of: SUGP1
location: join(144242..144458,145857..146028,146581..146684,147297..147521,149938..150061,150667..150770,151957..152068,152607..153217,153491..153597,154484..154661,155353..155459,156135..156280,157112..157241,158454..158480)
location: region:144242-158480:1
so has part: feature:144242-144458:1:exon
so has part: feature:145857-146028:1:exon
so has part: feature:146581-146684:1:exon
so has part: feature:147297-147521:1:exon
so has part: feature:149938-150061:1:exon
so has part: feature:150667-150770:1:exon
so has part: feature:151957-152068:1:exon
so has part: feature:152607-153217:1:exon
so has part: feature:153491-153597:1:exon
so has part: feature:154484-154661:1:exon
so has part: feature:155353-155459:1:exon
so has part: feature:156135-156280:1:exon
so has part: feature:157112-157241:1:exon
so has part: feature:158454-158480:1:exon

XP_041566905.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:144242-144458:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:145857-146028:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:146581-146684:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:147297-147521:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:149938-150061:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:150667-150770:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:151957-152068:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:152607-153217:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:153491-153597:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:154484-154661:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:155353-155459:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:156135-156280:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:157112-157241:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:158454-158480:1:exon

SUGP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: SUGP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SURP and G-patch domain-containing protein 1 isoform X4
translation: MTVAAEPPERGDSAAPPAGLGAAGGAGRAAGWRPEGLHLPGALALARPLARRARRGARWEGGSKMDNHRDAPGKASRWFGVSQSKSAKTSVNILQQEELIAQKKREIEARLEQQARQNSLSIPQLPLLGDDDGSESEASVSNKFVNDGSFLQQFLKLQREKSNAENAPNPPNSTGSTPTPQPGKKPALLGKRPGQALSRMLQARSLSLPKPSPVLSRLSVFQGPDEDEEEDYEQWLEIKEDSETRQVVEKLARFVAEGGPELEKVAMEDYKDNPAFSFLHDKNSREFLYYRKKVAEIRKENQNSQAASSQKVSPPADQETRNSAEKLAQFVAAGGPEVEAIALQNNRENPAFRFLYEPHSKGHRYYRQKLEEFRRARAAPGNPPFSGNPPFSGNPPFSGNPPFPGNPPFPGGSPFPGDSGLKRKSSPEASPSPLCFPPLPVPVPSPLPIPIPVPPPLPLPVPSPVLPAALPVPSASPAPSSSSTSPPDQLAPNSAPIPNPATTPNPSVTPNPGPIPSPAPGSTKKKRKSRWGPEEEKVELPLPQLVQQLDSPSPLSVQDLKGLGYEKGKPVGLVGVTELSEAQKKQLKEQQEMQQMYDMIMKHKRAMQEMQLLWERALQQHQHGYDSDEEVDSELGTWEHRLRRMEMDKTREWAEQLTQMGRGKHFIGDFLPPDELEKFMETFKALKEGREPDYSEYKEFKLTVENIGYQMLMKMGWKEGEGLGSDGQGIKNPVSKGTTTMDGAGFGIERPAELTKEDDEYEAFRKRMMLAYRFRPNPLNNPRRPYY
SIO_010081: SUGP1
subclass of: SO_0000673
so part of: SUGP1
location: join(144242..144458,145857..146028,146581..146684,147297..147521,149950..150061,150667..150770,151945..152068,152607..153217,153491..153597,154484..154661,155353..155459,156135..156280,157112..157241,158454..158480)
location: region:144242-158480:1
so has part: feature:144242-144458:1:exon
so has part: feature:145857-146028:1:exon
so has part: feature:146581-146684:1:exon
so has part: feature:147297-147521:1:exon
so has part: feature:149950-150061:1:exon
so has part: feature:150667-150770:1:exon
so has part: feature:151945-152068:1:exon
so has part: feature:152607-153217:1:exon
so has part: feature:153491-153597:1:exon
so has part: feature:154484-154661:1:exon
so has part: feature:155353-155459:1:exon
so has part: feature:156135-156280:1:exon
so has part: feature:157112-157241:1:exon
so has part: feature:158454-158480:1:exon

XP_041566906.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:144242-144458:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:145857-146028:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:146581-146684:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:147297-147521:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:149950-150061:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:150667-150770:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:151945-152068:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:152607-153217:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:153491-153597:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:154484-154661:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:155353-155459:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:156135-156280:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:157112-157241:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:158454-158480:1:exon

TM6SF2
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: TM6SF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 159746..164327
location: region:159746-164327:1
so has part: feature:159746-164327:1:exon
subclass of: SO_0000010

100225256
type: Gene
SIO_000068: ncbigene

position:159746:1
position: 159746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:164327:1
position: 164327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:159746-164327:1:exon

TM6SF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: TM6SF2
product: transmembrane 6 superfamily member 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030256971.3
SIO_010081: TM6SF2
subclass of: SO_0000673
so part of: TM6SF2
location: join(159746..159904,161205..161311,161586..161683,161819..161922,162337..162419,162532..162656,162751..162852,163212..163304,163378..163497,164053..164327)
location: region:159746-164327:1
so has part: feature:159746-159904:1:exon
so has part: feature:161205-161311:1:exon
so has part: feature:161586-161683:1:exon
so has part: feature:161819-161922:1:exon
so has part: feature:162337-162419:1:exon
so has part: feature:162532-162656:1:exon
so has part: feature:162751-162852:1:exon
so has part: feature:163212-163304:1:exon
so has part: feature:163378-163497:1:exon
so has part: feature:164053-164327:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:159746-159904:1:exon

position:159904:1
position: 159904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:161205-161311:1:exon

position:161205:1
position: 161205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:161311:1
position: 161311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:161586-161683:1:exon

position:161586:1
position: 161586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:161683:1
position: 161683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:161819-161922:1:exon

position:161819:1
position: 161819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:161922:1
position: 161922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:162337-162419:1:exon

position:162337:1
position: 162337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:162419:1
position: 162419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:162532-162656:1:exon

position:162532:1
position: 162532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:162656:1
position: 162656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:162751-162852:1:exon

position:162751:1
position: 162751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:162852:1
position: 162852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:163212-163304:1:exon

position:163212:1
position: 163212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:163304:1
position: 163304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:163378-163497:1:exon

position:163378:1
position: 163378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:163497:1
position: 163497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:164053-164327:1:exon

position:164053:1
position: 164053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TM6SF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: TM6SF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane 6 superfamily member 2
translation: MQLPAGPAALAAPLLALPVAFGVSAVTSLDRPPAPALALLLLLLGLASLLILTGSIGLVQDPLFCVFVLFSAVSLVDLLIALEEDGIISGIAELYVREGDPHLRTAHGLLTCYWDGAVHGGLGLAMAGAAGRRKSCRGLGLFWLGSLLMSAVVFLLGSLIGKYSPELSPSFLFNLPYLLLLAWTGPRLFQQPRALPSLSPEQIAEEQRKPLYRRPQDLLLILILILTAAFTFFRGLVVLDCPADSCFDYTYLQEPYLRDPVGYPKVQMLIYLFYLLPFLLLAAYGLARPGCSWLPDWSLLVAGGVAQAQFAHLGSSLHPRTPFPYRTPEEALGTFLLSNALYALGPQLLALRCLRSPAFFLRPSAAAKKHH
SIO_010081: TM6SF2
subclass of: SO_0000673
so part of: TM6SF2
location: join(159816..159904,161205..161311,161586..161683,161819..161922,162337..162419,162532..162656,162751..162852,163212..163304,163378..163497,164053..164247)
location: region:159816-164247:1
so has part: feature:159816-159904:1:exon
so has part: feature:161205-161311:1:exon
so has part: feature:161586-161683:1:exon
so has part: feature:161819-161922:1:exon
so has part: feature:162337-162419:1:exon
so has part: feature:162532-162656:1:exon
so has part: feature:162751-162852:1:exon
so has part: feature:163212-163304:1:exon
so has part: feature:163378-163497:1:exon
so has part: feature:164053-164247:1:exon

XP_030112831.3
type: Protein
SIO_000068: ncbiprotein

position:159816:1
position: 159816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:164247:1
position: 164247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:159816-159904:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:161205-161311:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:161586-161683:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:161819-161922:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:162337-162419:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:162532-162656:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:162751-162852:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:163212-163304:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:163378-163497:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:164053-164247:1:exon

HAPLN4
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: HAPLN4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 164859..170519
location: region:164859-170519:1
so has part: feature:164859-170519:1:exon
subclass of: SO_0000010

100222357
type: Gene
SIO_000068: ncbigene

position:164859:1
position: 164859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:170519:1
position: 170519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:164859-170519:1:exon

HAPLN4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: HAPLN4
product: hyaluronan and proteoglycan link protein 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 83 samples with support for all annotated introns
transcript id: XM_030256673.3
SIO_010081: HAPLN4
subclass of: SO_0000673
so part of: HAPLN4
location: join(164859..165203,166322..166439,167129..167491,168499..168801,169609..170519)
location: region:164859-170519:1
so has part: feature:164859-165203:1:exon
so has part: feature:166322-166439:1:exon
so has part: feature:167129-167491:1:exon
so has part: feature:168499-168801:1:exon
so has part: feature:169609-170519:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:164859-165203:1:exon

position:165203:1
position: 165203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:166322-166439:1:exon

position:166322:1
position: 166322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:166439:1
position: 166439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:167129-167491:1:exon

position:167129:1
position: 167129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:167491:1
position: 167491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:168499-168801:1:exon

position:168499:1
position: 168499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:168801:1
position: 168801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:169609-170519:1:exon

position:169609:1
position: 169609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HAPLN4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: HAPLN4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hyaluronan and proteoglycan link protein 4
translation: MRPQSPWAAAPAALLLLAALAAPEALPGARGRKKVVHVMEGDSGAVVVQTAPGKVVTHRGGTIILPCRYHYDVSAHDPAEIRLKWTKVTEPMDFVDVFVALGKARRAFGPYRGRTALQEDGAGDASLIIRNVTLQDYGRYECEVTNELEDDTGVVKLDLEGVIFPYHPRLGRYTLNFREAQQACLQQDGILASHEQLHQAWLEGLDWCNAGWLQDGSVQYPIARPRERCGRKDTPVGVRSYGYRHKESERYDAFCFTSNLNGKVYFLKTFRKLSYPEAVQACEKNGAAVAKVGQLYAAWKIQLLDRCEAGWLADGSIRYPIVNPRARCGGREPGVRNLGFPDKKYKLFGVYCFQKAGPAPPAAAAGLPKRV
SIO_010081: HAPLN4
subclass of: SO_0000673
so part of: HAPLN4
location: join(166322..166439,167129..167491,168499..168801,169609..169940)
location: region:166322-169940:1
so has part: feature:166322-166439:1:exon
so has part: feature:167129-167491:1:exon
so has part: feature:168499-168801:1:exon
so has part: feature:169609-169940:1:exon

XP_030112533.1
type: Protein
SIO_000068: ncbiprotein

position:169940:1
position: 169940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:166322-166439:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:167129-167491:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:168499-168801:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:169609-169940:1:exon

NCAN
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: NCAN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(171057..182885)
location: region:171057-182885:-1
so has part: feature:171057-182885:-1:exon
subclass of: SO_0000010

105758953
type: Gene
SIO_000068: ncbigene

position:171057:-1
position: 171057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:182885:-1
position: 182885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:171057-182885:-1:exon

NCAN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: NCAN
product: neurocan
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 72 samples with support for all annotated introns
transcript id: XM_030256670.3
SIO_010081: NCAN
subclass of: SO_0000673
so part of: NCAN
location: complement(join(171057..171885,171969..172152,172781..172925,173005..173087,173167..173325,173427..173540,173652..173768,173949..175013,175092..176102,176364..176657,177292..177419,177706..177880,178347..178748,179628..179707,182713..182885))
location: region:171057-182885:-1
so has part: feature:182713-182885:-1:exon
so has part: feature:179628-179707:-1:exon
so has part: feature:178347-178748:-1:exon
so has part: feature:177706-177880:-1:exon
so has part: feature:177292-177419:-1:exon
so has part: feature:176364-176657:-1:exon
so has part: feature:175092-176102:-1:exon
so has part: feature:173949-175013:-1:exon
so has part: feature:173652-173768:-1:exon
so has part: feature:173427-173540:-1:exon
so has part: feature:173167-173325:-1:exon
so has part: feature:173005-173087:-1:exon
so has part: feature:172781-172925:-1:exon
so has part: feature:171969-172152:-1:exon
so has part: feature:171057-171885:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:182713-182885:-1:exon

position:182713:-1
position: 182713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:179628-179707:-1:exon

position:179628:-1
position: 179628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:179707:-1
position: 179707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:178347-178748:-1:exon

position:178347:-1
position: 178347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:178748:-1
position: 178748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:177706-177880:-1:exon

position:177706:-1
position: 177706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:177880:-1
position: 177880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:177292-177419:-1:exon

position:177292:-1
position: 177292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:177419:-1
position: 177419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:176364-176657:-1:exon

position:176364:-1
position: 176364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:176657:-1
position: 176657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:175092-176102:-1:exon

position:175092:-1
position: 175092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:176102:-1
position: 176102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:173949-175013:-1:exon

position:173949:-1
position: 173949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:175013:-1
position: 175013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:173652-173768:-1:exon

position:173652:-1
position: 173652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:173768:-1
position: 173768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:173427-173540:-1:exon

position:173427:-1
position: 173427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:173540:-1
position: 173540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:173167-173325:-1:exon

position:173167:-1
position: 173167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:173325:-1
position: 173325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:173005-173087:-1:exon

position:173005:-1
position: 173005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:173087:-1
position: 173087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:172781-172925:-1:exon

position:172781:-1
position: 172781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:172925:-1
position: 172925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:171969-172152:-1:exon

position:171969:-1
position: 171969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:172152:-1
position: 172152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:171057-171885:-1:exon

position:171885:-1
position: 171885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NCAN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: NCAN
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: neurocan core protein
translation: MVPVMGDAACWVLLGLSLLPIAALGSQDEGKVIRISRVQRQAVRVGLGEPAALPCLFLLRSSSSPGPSEPPEPPRIKWSKVRSAGGRREDSPVLVAKEGAVKVAHAYEGRAWLPGYGRDRGNATLRLRAARASDAGLYRCQVVAGIDDEQDLLPLEVTGVVFHYRPAGRRYALSFAAARRACRDSSAVIASPQHLQAAFEDGYDNCDAGWLSDQSVRYPITLSRPGCYGDRDRLPGVRSYGRRDSAELYDVYCYSRELRGTVFHASGPGRFTWQGARRHCRSRGAALATAGQLHLAWRAGLDRCDPGWLADGSVRYPIRQPRSKCGGEAPGVRTLYQFPNRTGFPPAASRFDAYCYKAAGPGDTEQPVSPVPPTPDPPGSDNALVEHGEDPGTSGDTRDIPRDSYDPLPPPGPAGLGGDEDEQLRPASGSPVARRGDLPGTALAPAPAAAGLGTGAATSPVPTVTSPAPTATSPAPTATSPVPTGTSPLPTGTSPMPTATSPVPTGTSPVPTGTSPPPTVTSPPPSGPASLAWPREEESLNLVDPESSRRDPPSASPARGDPAGPPATLRSHPQGPALELSTGSSLSPPGPGTVPSAAPESPGTPAGSSGAPRRSYPGLNGRHFAFQRHSRDPAAAAGDTAVTAAIVTRAPVRAQEVEGGAANAVELWSPPRAGSPRRKGPHASPNALEEDAGPELEAPATAPVSLPPAPRDSGTPAGTPPVPSPSPATPRDARDHRDPPAGGAQPRVPGARGDSPRPPADIPEEFSGFAASQEGSVPPLPPLPPAPLVAEGPELAPQPRGDGSDGSGAPGDGALERQRKAVPFLQPDGPSEGRPATPGLAEGAPPGPRARSGPAAPHGAAEPGSEAAASPPAWGVPSAPPSPAATEALLWAGTERPEALAGLEPVAEEGSAGFAPPDPQPSQRSEPGPGPAEQLLLSPPDPRQPPATPGPPAVPGDEEDASGEAGREEPPTPLGSAARGPWPSPSAPQPGGTEPAGSPSAGLLPEPSAEPGGAGGAPLPDADSGSGEEPALDERELLAWAGTGSAGGHAPPDPCRSNPCLHGGTSRANGTVCGCSCAPGFTGENCEIDIDDCLSSPCRNGGTCIDEVNSFVCLCLPSYGGSRCEKDTEGCDHNWHKFQGHCYRYFSRRRSWEDAERDCRRRAGHLTSIHSQEEHAFINGFGHENTWIGLNDRIVEQDFQWTDNTGLQYENWRENQPDNFFAGGEDCVVLVSHEIGKWNDVPCNYNLPYICKKGTVLCGPPPGVPNAFPVGKKREKYNIHSSVRYQCREGFTQRHVPTIKCHSSGKWDRPKILCTKPRRSHRARRHRRHRHSHPHHQHRRHQPRKERRKHRQRLRLDWMEEGHYF
SIO_010081: NCAN
subclass of: SO_0000673
so part of: NCAN
location: complement(join(171737..171885,171969..172152,172781..172925,173005..173087,173167..173325,173427..173540,173652..173768,173949..175013,175092..176102,176364..176657,177292..177419,177706..177880,178347..178748,179628..179700))
location: region:171737-179700:-1
so has part: feature:179628-179700:-1:exon
so has part: feature:178347-178748:-1:exon
so has part: feature:177706-177880:-1:exon
so has part: feature:177292-177419:-1:exon
so has part: feature:176364-176657:-1:exon
so has part: feature:175092-176102:-1:exon
so has part: feature:173949-175013:-1:exon
so has part: feature:173652-173768:-1:exon
so has part: feature:173427-173540:-1:exon
so has part: feature:173167-173325:-1:exon
so has part: feature:173005-173087:-1:exon
so has part: feature:172781-172925:-1:exon
so has part: feature:171969-172152:-1:exon
so has part: feature:171737-171885:-1:exon

XP_030112530.3
type: Protein
SIO_000068: ncbiprotein

position:171737:-1
position: 171737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:179700:-1
position: 179700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:179628-179700:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:178347-178748:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:177706-177880:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:177292-177419:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:176364-176657:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:175092-176102:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:173949-175013:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:173652-173768:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:173427-173540:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:173167-173325:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:173005-173087:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:172781-172925:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:171969-172152:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:171737-171885:-1:exon

LOC115490856
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC115490856
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 188220..190101
location: region:188220-190101:1
so has part: feature:188220-190101:1:exon
subclass of: SO_0000010

115490856
type: Gene
SIO_000068: ncbigene

position:188220:1
position: 188220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:190101:1
position: 190101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:188220-190101:1:exon

LOC115490856
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC115490856
product: nuclear receptor 2C2 associated protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 95 samples with support for all annotated introns
transcript id: XM_030256891.3
SIO_010081: LOC115490856
subclass of: SO_0000673
so part of: LOC115490856
location: join(188220..188356,188756..188802,188883..188973,189123..189228,189684..189751,189884..190101)
location: region:188220-190101:1
so has part: feature:188220-188356:1:exon
so has part: feature:188756-188802:1:exon
so has part: feature:188883-188973:1:exon
so has part: feature:189123-189228:1:exon
so has part: feature:189684-189751:1:exon
so has part: feature:189884-190101:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:188220-188356:1:exon

position:188356:1
position: 188356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:188756-188802:1:exon

position:188756:1
position: 188756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:188802:1
position: 188802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:188883-188973:1:exon

position:188883:1
position: 188883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:188973:1
position: 188973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:189123-189228:1:exon

position:189123:1
position: 189123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:189228:1
position: 189228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:189684-189751:1:exon

position:189684:1
position: 189684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:189751:1
position: 189751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:189884-190101:1:exon

position:189884:1
position: 189884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115490856
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC115490856
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear receptor 2C2-associated protein
translation: MPLESLVCARTATRVSSVLNRDVKHFGKQNLFDGSEETCWNSGQGTAQWVTLDFPSPVRVSQLHIQFQGGFSSRLCTLEGCRTGEELVKISELYPQDSHAMQRFQVEETVLDKLKITFGSSTDFFGRVVVYHLGVLGERL
SIO_010081: LOC115490856
subclass of: SO_0000673
so part of: LOC115490856
location: join(188762..188802,188883..188973,189123..189228,189684..189751,189884..190000)
location: region:188762-190000:1
so has part: feature:188762-188802:1:exon
so has part: feature:188883-188973:1:exon
so has part: feature:189123-189228:1:exon
so has part: feature:189684-189751:1:exon
so has part: feature:189884-190000:1:exon

XP_030112751.1
type: Protein
SIO_000068: ncbiprotein

position:188762:1
position: 188762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:190000:1
position: 190000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:188762-188802:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:188883-188973:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:189123-189228:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:189684-189751:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:189884-190000:1:exon

RFXANK
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: RFXANK
note: regulatory factor X associated ankyrin containing protein; Derived by automated computational analysis using gene prediction method: BestRefSeq,Gnomon.
so part of: sequence
location: complement(190441..195172)
location: region:190441-195172:-1
so has part: feature:190441-195172:-1:exon
subclass of: SO_0000010

101234131
type: Gene
SIO_000068: ncbigene

position:190441:-1
position: 190441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:195172:-1
position: 195172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:190441-195172:-1:exon

RFXANK
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: RFXANK
product: regulatory factor X associated ankyrin containing protein, transcript variant 1
inference: similar to RNA sequence, mRNA (same species):RefSeq:NM_001245725.1
exception: annotated by transcript or proteomic data
note: The RefSeq transcript has 9 substitutions, 3 non-frameshifting indels compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001245725.1
SIO_010081: RFXANK
subclass of: SO_0000673
so part of: RFXANK
location: complement(join(190441..190673,190947..191027,191177..191243,191745..191870,192383..192483,192752..192817,193152..193232,193869..193940,194055..194199,194644..194769))
location: region:190441-194769:-1
so has part: feature:194644-194769:-1:exon
so has part: feature:194055-194199:-1:exon
so has part: feature:193869-193940:-1:exon
so has part: feature:193152-193232:-1:exon
so has part: feature:192752-192817:-1:exon
so has part: feature:192383-192483:-1:exon
so has part: feature:191745-191870:-1:exon
so has part: feature:191177-191243:-1:exon
so has part: feature:190947-191027:-1:exon
so has part: feature:190441-190673:-1:exon

position:194769:-1
position: 194769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:194644-194769:-1:exon

position:194644:-1
position: 194644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:194055-194199:-1:exon

position:194055:-1
position: 194055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:194199:-1
position: 194199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:193869-193940:-1:exon

position:193869:-1
position: 193869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:193940:-1
position: 193940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:193152-193232:-1:exon

position:193152:-1
position: 193152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:193232:-1
position: 193232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:192752-192817:-1:exon

position:192752:-1
position: 192752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:192817:-1
position: 192817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:192383-192483:-1:exon

position:192383:-1
position: 192383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:192483:-1
position: 192483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:191745-191870:-1:exon

position:191745:-1
position: 191745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:191870:-1
position: 191870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:191177-191243:-1:exon

position:191177:-1
position: 191177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:191243:-1
position: 191243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:190947-191027:-1:exon

position:190947:-1
position: 190947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:191027:-1
position: 191027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:190441-190673:-1:exon

position:190673:-1
position: 190673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RFXANK
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: RFXANK
product: regulatory factor X associated ankyrin containing protein, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 104 samples with support for all annotated introns
transcript id: XM_030256516.3
SIO_010081: RFXANK
subclass of: SO_0000673
so part of: RFXANK
location: complement(join(190455..190673,190947..191027,191177..191243,191745..191870,192383..192483,192752..192817,193152..193232,193869..193940,194055..194199,195089..195172))
location: region:190455-195172:-1
so has part: feature:195089-195172:-1:exon
so has part: feature:194055-194199:-1:exon
so has part: feature:193869-193940:-1:exon
so has part: feature:193152-193232:-1:exon
so has part: feature:192752-192817:-1:exon
so has part: feature:192383-192483:-1:exon
so has part: feature:191745-191870:-1:exon
so has part: feature:191177-191243:-1:exon
so has part: feature:190947-191027:-1:exon
so has part: feature:190455-190673:-1:exon

position:190455:-1
position: 190455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:195089-195172:-1:exon

position:195089:-1
position: 195089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:194055-194199:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:193869-193940:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:193152-193232:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:192752-192817:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:192383-192483:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:191745-191870:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:191177-191243:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:190947-191027:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:190455-190673:-1:exon

RFXANK
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: RFXANK
product: regulatory factor X associated ankyrin containing protein, transcript variant 2
inference: similar to RNA sequence, mRNA (same species):RefSeq:NM_001309504.1
exception: annotated by transcript or proteomic data
note: The RefSeq transcript has 8 substitutions, 1 non-frameshifting indel compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001309504.1
SIO_010081: RFXANK
subclass of: SO_0000673
so part of: RFXANK
location: complement(join(190455..190678,190947..191027,191177..191243,191745..191870,192383..192483,192752..192817,193152..193232,193869..193940,194055..194199,195089..195149))
location: region:190455-195149:-1
so has part: feature:195089-195149:-1:exon
so has part: feature:194055-194199:-1:exon
so has part: feature:193869-193940:-1:exon
so has part: feature:193152-193232:-1:exon
so has part: feature:192752-192817:-1:exon
so has part: feature:192383-192483:-1:exon
so has part: feature:191745-191870:-1:exon
so has part: feature:191177-191243:-1:exon
so has part: feature:190947-191027:-1:exon
so has part: feature:190455-190678:-1:exon

position:195149:-1
position: 195149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:195089-195149:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:194055-194199:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:193869-193940:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:193152-193232:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:192752-192817:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:192383-192483:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:191745-191870:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:191177-191243:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:190947-191027:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:190455-190678:-1:exon

position:190678:-1
position: 190678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RFXANK
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: RFXANK
product: regulatory factor X associated ankyrin containing protein, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 94 samples with support for all annotated introns
transcript id: XM_030256517.3
SIO_010081: RFXANK
subclass of: SO_0000673
so part of: RFXANK
location: complement(join(190455..190673,190947..191027,191177..191243,191745..191870,192383..192483,192752..192817,193152..193232,193869..193940,194055..194199,194760..195045))
location: region:190455-195045:-1
so has part: feature:194760-195045:-1:exon
so has part: feature:194055-194199:-1:exon
so has part: feature:193869-193940:-1:exon
so has part: feature:193152-193232:-1:exon
so has part: feature:192752-192817:-1:exon
so has part: feature:192383-192483:-1:exon
so has part: feature:191745-191870:-1:exon
so has part: feature:191177-191243:-1:exon
so has part: feature:190947-191027:-1:exon
so has part: feature:190455-190673:-1:exon

position:195045:-1
position: 195045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:194760-195045:-1:exon

position:194760:-1
position: 194760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:194055-194199:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:193869-193940:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:193152-193232:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:192752-192817:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:192383-192483:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:191745-191870:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:191177-191243:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:190947-191027:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:190455-190673:-1:exon

RFXANK
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: RFXANK
product: regulatory factor X associated ankyrin containing protein, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 54 samples with support for all annotated introns
transcript id: XM_030256518.3
SIO_010081: RFXANK
subclass of: SO_0000673
so part of: RFXANK
location: complement(join(190455..190673,190947..191027,191177..191243,191745..191870,192383..192483,192752..192817,193152..193232,193869..193940,194055..194199,194779..194829))
location: region:190455-194829:-1
so has part: feature:194779-194829:-1:exon
so has part: feature:194055-194199:-1:exon
so has part: feature:193869-193940:-1:exon
so has part: feature:193152-193232:-1:exon
so has part: feature:192752-192817:-1:exon
so has part: feature:192383-192483:-1:exon
so has part: feature:191745-191870:-1:exon
so has part: feature:191177-191243:-1:exon
so has part: feature:190947-191027:-1:exon
so has part: feature:190455-190673:-1:exon

position:194829:-1
position: 194829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:194779-194829:-1:exon

position:194779:-1
position: 194779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:194055-194199:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:193869-193940:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:193152-193232:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:192752-192817:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:192383-192483:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:191745-191870:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:191177-191243:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:190947-191027:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:190455-190673:-1:exon

RFXANK
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: RFXANK
product: regulatory factor X associated ankyrin containing protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 131 samples with support for all annotated introns
transcript id: XM_030256514.3
SIO_010081: RFXANK
subclass of: SO_0000673
so part of: RFXANK
location: complement(join(190455..190673,190947..191027,191177..191243,191745..191870,192383..192483,192752..192817,193152..193232,193869..193940,194055..194339))
location: region:190455-194339:-1
so has part: feature:194055-194339:-1:exon
so has part: feature:193869-193940:-1:exon
so has part: feature:193152-193232:-1:exon
so has part: feature:192752-192817:-1:exon
so has part: feature:192383-192483:-1:exon
so has part: feature:191745-191870:-1:exon
so has part: feature:191177-191243:-1:exon
so has part: feature:190947-191027:-1:exon
so has part: feature:190455-190673:-1:exon

position:194339:-1
position: 194339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:194055-194339:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:193869-193940:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:193152-193232:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:192752-192817:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:192383-192483:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:191745-191870:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:191177-191243:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:190947-191027:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:190455-190673:-1:exon

RFXANK
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: RFXANK
product: regulatory factor X associated ankyrin containing protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 150 samples with support for all annotated introns
transcript id: XM_030256515.3
SIO_010081: RFXANK
subclass of: SO_0000673
so part of: RFXANK
location: complement(join(190455..190678,190947..191027,191177..191243,191745..191870,192383..192483,192752..192817,193152..193232,193869..193940,194055..194334))
location: region:190455-194334:-1
so has part: feature:194055-194334:-1:exon
so has part: feature:193869-193940:-1:exon
so has part: feature:193152-193232:-1:exon
so has part: feature:192752-192817:-1:exon
so has part: feature:192383-192483:-1:exon
so has part: feature:191745-191870:-1:exon
so has part: feature:191177-191243:-1:exon
so has part: feature:190947-191027:-1:exon
so has part: feature:190455-190678:-1:exon

position:194334:-1
position: 194334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:194055-194334:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:193869-193940:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:193152-193232:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:192752-192817:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:192383-192483:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:191745-191870:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:191177-191243:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:190947-191027:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:190455-190678:-1:exon

RFXANK
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: RFXANK
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA-binding protein RFXANK isoform X1
translation: MGSTKGTPDPAAAWGSQALGVCPPVSPLSQLKEPSGTPLEPGTPRNRVGKGGKERRGGMGDAACPQQDGDPALPEAGDGGAGTPRNSSVAPGDSQSPGEALDGFPLKHSNTLTNRQRGNEVSALPATLDTLSIHQLAAQGELIQLKEHLRKGENLVNKPDERGFTPLIWAAAFGEIETVRHLLEWGADPHALAKERESALALASMGGYTDIVTLLLDRDVDINTYDWNGGTPLLYAVRGNHVKCVEALLACGADLTEEADSGYTPMDLAVALGHKKAGDREPHPEAVPEQEEEEMRRQLQTQRNPGISALMDPGLPTAAAHKIQGRSFQPWLGSAAPCLPSEVKSNCN
SIO_010081: RFXANK
subclass of: SO_0000673
so part of: RFXANK
location: complement(join(190456..190673,190947..191027,191177..191243,191745..191870,192383..192483,192752..192817,193152..193232,193869..193940,194055..194289))
location: region:190456-194289:-1
so has part: feature:194055-194289:-1:exon
so has part: feature:193869-193940:-1:exon
so has part: feature:193152-193232:-1:exon
so has part: feature:192752-192817:-1:exon
so has part: feature:192383-192483:-1:exon
so has part: feature:191745-191870:-1:exon
so has part: feature:191177-191243:-1:exon
so has part: feature:190947-191027:-1:exon
so has part: feature:190456-190673:-1:exon

XP_030112374.3
type: Protein
SIO_000068: ncbiprotein

position:190456:-1
position: 190456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:194289:-1
position: 194289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:194055-194289:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:193869-193940:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:193152-193232:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:192752-192817:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:192383-192483:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:191745-191870:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:191177-191243:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:190947-191027:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:190456-190673:-1:exon

RFXANK
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: RFXANK
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA-binding protein RFXANK isoform X3
translation: MGDAACPQQDGDPALPEAGDGGAGTPRNSSVAPGDSQSPGEALDGFPLKHSNTLTNRQRGNEVSALPATLDTLSIHQLAAQGELIQLKEHLRKGENLVNKPDERGFTPLIWAAAFGEIETVRHLLEWGADPHALAKERESALALASMGGYTDIVTLLLDRDVDINTYDWNGGTPLLYAVRGNHVKCVEALLACGADLTEEADSGYTPMDLAVALGHKKAGDREPHPEAVPEQEEEEMRRQLQTQRNPGISALMDPGLPTAAAHKIQGRSFQPWLGSAAPCLPSEVKSNCN
SIO_010081: RFXANK
subclass of: SO_0000673
so part of: RFXANK
location: complement(join(190456..190673,190947..191027,191177..191243,191745..191870,192383..192483,192752..192817,193152..193232,193869..193940,194055..194115))
location: region:190456-194115:-1
so has part: feature:194055-194115:-1:exon
so has part: feature:193869-193940:-1:exon
so has part: feature:193152-193232:-1:exon
so has part: feature:192752-192817:-1:exon
so has part: feature:192383-192483:-1:exon
so has part: feature:191745-191870:-1:exon
so has part: feature:191177-191243:-1:exon
so has part: feature:190947-191027:-1:exon
so has part: feature:190456-190673:-1:exon

XP_030112376.3
type: Protein
SIO_000068: ncbiprotein

position:194115:-1
position: 194115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:194055-194115:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:193869-193940:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:193152-193232:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:192752-192817:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:192383-192483:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:191745-191870:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:191177-191243:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:190947-191027:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:190456-190673:-1:exon

RFXANK
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: RFXANK
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA-binding protein RFXANK isoform X3
translation: MGDAACPQQDGDPALPEAGDGGAGTPRNSSVAPGDSQSPGEALDGFPLKHSNTLTNRQRGNEVSALPATLDTLSIHQLAAQGELIQLKEHLRKGENLVNKPDERGFTPLIWAAAFGEIETVRHLLEWGADPHALAKERESALALASMGGYTDIVTLLLDRDVDINTYDWNGGTPLLYAVRGNHVKCVEALLACGADLTEEADSGYTPMDLAVALGHKKAGDREPHPEAVPEQEEEEMRRQLQTQRNPGISALMDPGLPTAAAHKIQGRSFQPWLGSAAPCLPSEVKSNCN
SIO_010081: RFXANK
subclass of: SO_0000673
so part of: RFXANK
location: complement(join(190456..190673,190947..191027,191177..191243,191745..191870,192383..192483,192752..192817,193152..193232,193869..193940,194055..194115))
location: region:190456-194115:-1
so has part: feature:194055-194115:-1:exon
so has part: feature:193869-193940:-1:exon
so has part: feature:193152-193232:-1:exon
so has part: feature:192752-192817:-1:exon
so has part: feature:192383-192483:-1:exon
so has part: feature:191745-191870:-1:exon
so has part: feature:191177-191243:-1:exon
so has part: feature:190947-191027:-1:exon
so has part: feature:190456-190673:-1:exon

XP_030112377.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:194055-194115:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:193869-193940:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:193152-193232:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:192752-192817:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:192383-192483:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:191745-191870:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:191177-191243:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:190947-191027:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:190456-190673:-1:exon

RFXANK
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: RFXANK
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA-binding protein RFXANK isoform X3
translation: MGDAACPQQDGDPALPEAGDGGAGTPRNSSVAPGDSQSPGEALDGFPLKHSNTLTNRQRGNEVSALPATLDTLSIHQLAAQGELIQLKEHLRKGENLVNKPDERGFTPLIWAAAFGEIETVRHLLEWGADPHALAKERESALALASMGGYTDIVTLLLDRDVDINTYDWNGGTPLLYAVRGNHVKCVEALLACGADLTEEADSGYTPMDLAVALGHKKAGDREPHPEAVPEQEEEEMRRQLQTQRNPGISALMDPGLPTAAAHKIQGRSFQPWLGSAAPCLPSEVKSNCN
SIO_010081: RFXANK
subclass of: SO_0000673
so part of: RFXANK
location: complement(join(190456..190673,190947..191027,191177..191243,191745..191870,192383..192483,192752..192817,193152..193232,193869..193940,194055..194115))
location: region:190456-194115:-1
so has part: feature:194055-194115:-1:exon
so has part: feature:193869-193940:-1:exon
so has part: feature:193152-193232:-1:exon
so has part: feature:192752-192817:-1:exon
so has part: feature:192383-192483:-1:exon
so has part: feature:191745-191870:-1:exon
so has part: feature:191177-191243:-1:exon
so has part: feature:190947-191027:-1:exon
so has part: feature:190456-190673:-1:exon

XP_030112378.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:194055-194115:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:193869-193940:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:193152-193232:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:192752-192817:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:192383-192483:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:191745-191870:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:191177-191243:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:190947-191027:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:190456-190673:-1:exon

RFXANK
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: RFXANK
inference: similar to AA sequence (same species):RefSeq:NP_001232654.1
exception: annotated by transcript or proteomic data
note: isoform 1 is encoded by transcript variant 1; The RefSeq protein has 4 substitutions compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: DNA-binding protein RFXANK isoform 1
translation: MGDAACPQQDGDPALPEAGDGGAGTPRNSSAAPGDSQSPGEALDGFPLKHSNTLTNRQRGNEVSALPATLDTLSIHQLAAQGELIQLKEHLRKGENLVNKPDERGFTPLIWAAAFGEIETVRHLLEWGADPHALAKERESALALASMGGYTDIVTLLLDRDVDINTYDWNGGTPLLYAVRGNHVKCVEALLACGADLTEEADSGYTPMDLAVALGHKKAGDREPHPEAVPEQEEEEMKRQLQTRRNPGISALMDPGLPTAAAHKIQGRSFQPWLGSAAPCLLSEVKSNCN
SIO_010081: RFXANK
subclass of: SO_0000673
so part of: RFXANK
location: complement(join(190456..190673,190947..191027,191177..191243,191745..191870,192383..192483,192752..192817,193152..193232,193869..193940,194055..194115))
location: region:190456-194115:-1
so has part: feature:194055-194115:-1:exon
so has part: feature:193869-193940:-1:exon
so has part: feature:193152-193232:-1:exon
so has part: feature:192752-192817:-1:exon
so has part: feature:192383-192483:-1:exon
so has part: feature:191745-191870:-1:exon
so has part: feature:191177-191243:-1:exon
so has part: feature:190947-191027:-1:exon
so has part: feature:190456-190673:-1:exon

NP_001232654.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:194055-194115:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:193869-193940:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:193152-193232:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:192752-192817:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:192383-192483:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:191745-191870:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:191177-191243:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:190947-191027:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:190456-190673:-1:exon

RFXANK
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: RFXANK
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA-binding protein RFXANK isoform X2
translation: MGSTKGTPDPAAAWGSQALGVCPPVSPLSQLKEPSGTPLEPGTPRNRVGKGGKERRGGMGDAACPQQDGDPALPEAGDGGAGTPRNSSVAPGDSQSPGEALDGFPLKHSNTLTNRQRGNEVSALPATLDTLSIHQLAAQGELIQLKEHLRKGENLVNKPDERGFTPLIWAAAFGEIETVRHLLEWGADPHALAKERESALALASMGGYTDIVTLLLDRDVDINTYDWNGGTPLLYAVRGNHVKCVEALLACGADLTEEADSGYTPMDLAVALGHKKVQQVIENHILKLFRNKKKKK
SIO_010081: RFXANK
subclass of: SO_0000673
so part of: RFXANK
location: complement(join(190617..190678,190947..191027,191177..191243,191745..191870,192383..192483,192752..192817,193152..193232,193869..193940,194055..194289))
location: region:190617-194289:-1
so has part: feature:194055-194289:-1:exon
so has part: feature:193869-193940:-1:exon
so has part: feature:193152-193232:-1:exon
so has part: feature:192752-192817:-1:exon
so has part: feature:192383-192483:-1:exon
so has part: feature:191745-191870:-1:exon
so has part: feature:191177-191243:-1:exon
so has part: feature:190947-191027:-1:exon
so has part: feature:190617-190678:-1:exon

XP_030112375.3
type: Protein
SIO_000068: ncbiprotein

position:190617:-1
position: 190617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:194055-194289:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:193869-193940:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:193152-193232:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:192752-192817:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:192383-192483:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:191745-191870:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:191177-191243:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:190947-191027:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:190617-190678:-1:exon

RFXANK
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: RFXANK
inference: similar to AA sequence (same species):RefSeq:NP_001296433.1
exception: annotated by transcript or proteomic data
note: isoform 2 is encoded by transcript variant 2; The RefSeq protein has 1 substitution compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: DNA-binding protein RFXANK isoform 2
translation: MGDAACPQQDGDPALPEAGDGGAGTPRNSSAAPGDSQSPGEALDGFPLKHSNTLTNRQRGNEVSALPATLDTLSIHQLAAQGELIQLKEHLRKGENLVNKPDERGFTPLIWAAAFGEIETVRHLLEWGADPHALAKERESALALASMGGYTDIVTLLLDRDVDINTYDWNGGTPLLYAVRGNHVKCVEALLACGADLTEEADSGYTPMDLAVALGHKKVQQVIENHILKLFRNKKKKK
SIO_010081: RFXANK
subclass of: SO_0000673
so part of: RFXANK
location: complement(join(190617..190678,190947..191027,191177..191243,191745..191870,192383..192483,192752..192817,193152..193232,193869..193940,194055..194115))
location: region:190617-194115:-1
so has part: feature:194055-194115:-1:exon
so has part: feature:193869-193940:-1:exon
so has part: feature:193152-193232:-1:exon
so has part: feature:192752-192817:-1:exon
so has part: feature:192383-192483:-1:exon
so has part: feature:191745-191870:-1:exon
so has part: feature:191177-191243:-1:exon
so has part: feature:190947-191027:-1:exon
so has part: feature:190617-190678:-1:exon

NP_001296433.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:194055-194115:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:193869-193940:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:193152-193232:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:192752-192817:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:192383-192483:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:191745-191870:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:191177-191243:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:190947-191027:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:190617-190678:-1:exon

BORCS8
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: BORCS8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 195112..199455
location: region:195112-199455:1
so has part: feature:195112-199455:1:exon
subclass of: SO_0000010

115490857
type: Gene
SIO_000068: ncbigene

position:195112:1
position: 195112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:199455:1
position: 199455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:195112-199455:1:exon

BORCS8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: BORCS8
product: BLOC-1 related complex subunit 8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 14 ESTs, 5 long SRA reads, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 133 samples with support for all annotated introns
transcript id: XM_030256893.3
SIO_010081: BORCS8
subclass of: SO_0000673
so part of: BORCS8
location: join(195112..195240,195998..196110,197163..197227,198033..198140,199222..199455)
location: region:195112-199455:1
so has part: feature:195112-195240:1:exon
so has part: feature:195998-196110:1:exon
so has part: feature:197163-197227:1:exon
so has part: feature:198033-198140:1:exon
so has part: feature:199222-199455:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:195112-195240:1:exon

position:195240:1
position: 195240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:195998-196110:1:exon

position:195998:1
position: 195998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:196110:1
position: 196110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:197163-197227:1:exon

position:197163:1
position: 197163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:197227:1
position: 197227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:198033-198140:1:exon

position:198033:1
position: 198033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:198140:1
position: 198140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:199222-199455:1:exon

position:199222:1
position: 199222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

BORCS8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: BORCS8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BLOC-1-related complex subunit 8
translation: MEEAEMQLKVKKVTDKFTESLYVLANEPSVALYRLQEHVRRSLPELAQHKSDMQSWEEQSQGAIYTVEYACSAIKSMADSSVYFRSIDSLLRHSIALRERLGSAQGRSTIAPQSKNPPGTS
SIO_010081: BORCS8
subclass of: SO_0000673
so part of: BORCS8
location: join(195204..195240,195998..196110,197163..197227,198033..198140,199222..199264)
location: region:195204-199264:1
so has part: feature:195204-195240:1:exon
so has part: feature:195998-196110:1:exon
so has part: feature:197163-197227:1:exon
so has part: feature:198033-198140:1:exon
so has part: feature:199222-199264:1:exon

XP_030112753.3
type: Protein
SIO_000068: ncbiprotein

position:195204:1
position: 195204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:199264:1
position: 199264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:195204-195240:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:195998-196110:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:197163-197227:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:198033-198140:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:199222-199264:1:exon

LOC100221477
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC100221477
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 201407..210824
location: region:201407-210824:1
so has part: feature:201407-210824:1:exon
subclass of: SO_0000010

100221477
type: Gene
SIO_000068: ncbigene

position:201407:1
position: 201407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:210824:1
position: 210824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:201407-210824:1:exon

LOC100221477
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC100221477
product: myocyte-specific enhancer factor 2B, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_030256997.3
SIO_010081: LOC100221477
subclass of: SO_0000673
so part of: LOC100221477
location: join(201407..201720,206542..206621,206878..207285,207829..207991,208611..208756,209229..209328,209510..209594,210005..210824)
location: region:201407-210824:1
so has part: feature:201407-201720:1:exon
so has part: feature:206542-206621:1:exon
so has part: feature:206878-207285:1:exon
so has part: feature:207829-207991:1:exon
so has part: feature:208611-208756:1:exon
so has part: feature:209229-209328:1:exon
so has part: feature:209510-209594:1:exon
so has part: feature:210005-210824:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:201407-201720:1:exon

position:201720:1
position: 201720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:206542-206621:1:exon

position:206542:1
position: 206542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:206621:1
position: 206621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:206878-207285:1:exon

position:206878:1
position: 206878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:207285:1
position: 207285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:207829-207991:1:exon

position:207829:1
position: 207829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:207991:1
position: 207991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:208611-208756:1:exon

position:208611:1
position: 208611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:208756:1
position: 208756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:209229-209328:1:exon

position:209229:1
position: 209229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:209328:1
position: 209328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:209510-209594:1:exon

position:209510:1
position: 209510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:209594:1
position: 209594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:210005-210824:1:exon

position:210005:1
position: 210005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100221477
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC100221477
product: myocyte-specific enhancer factor 2B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030256998.3
SIO_010081: LOC100221477
subclass of: SO_0000673
so part of: LOC100221477
location: join(201408..201720,206542..206621,206878..207081,207154..207285,207829..207991,208611..208756,209229..209328,209510..209594,210005..210824)
location: region:201408-210824:1
so has part: feature:201408-201720:1:exon
so has part: feature:206542-206621:1:exon
so has part: feature:206878-207081:1:exon
so has part: feature:207154-207285:1:exon
so has part: feature:207829-207991:1:exon
so has part: feature:208611-208756:1:exon
so has part: feature:209229-209328:1:exon
so has part: feature:209510-209594:1:exon
so has part: feature:210005-210824:1:exon

position:201408:1
position: 201408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:201408-201720:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:206542-206621:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:206878-207081:1:exon

position:207081:1
position: 207081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:207154-207285:1:exon

position:207154:1
position: 207154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:207829-207991:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:208611-208756:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:209229-209328:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:209510-209594:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:210005-210824:1:exon

LOC100221477
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC100221477
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myocyte-specific enhancer factor 2B isoform X1
translation: MGRKKIQISRILDQRNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSTNRLFQYASSDMDKVLLKYTEYSEPHESRTNSDILEVAAGAAPGPGHRRAPLTVPVASPQTLKRKGLGLESHELELEEGPEPPGDRGRRLGEGADLALARARFYSPVPLPEAAYGSSPPAPEAALGSGSSSPQGQGRSPTARAAAPKPPGRSPGPLPPGLGHPLFPAATLGRALATRMSPPLFLGAEGRRGECQGGLASGRSGGSVARPLFPGLQPLSPGSSGLPSHGLAAFPFLSPAPADFGAAEVPPPPGFLQPPAWQHPRDVAALGASSRIVPAEEPPAVPCASPQRHQAISIKSERVSPGLGCPPGTPQPPLTSLATLSEASRAPGDLQPRGDFAKGFFPPCAPGPPPAGQRVPVPARRGTPVDVWQR
SIO_010081: LOC100221477
subclass of: SO_0000673
so part of: LOC100221477
location: join(206568..206621,206878..207285,207829..207991,208611..208756,209229..209328,209510..209594,210005..210317)
location: region:206568-210317:1
so has part: feature:206568-206621:1:exon
so has part: feature:206878-207285:1:exon
so has part: feature:207829-207991:1:exon
so has part: feature:208611-208756:1:exon
so has part: feature:209229-209328:1:exon
so has part: feature:209510-209594:1:exon
so has part: feature:210005-210317:1:exon

XP_030112857.3
type: Protein
SIO_000068: ncbiprotein

position:206568:1
position: 206568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:210317:1
position: 210317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:206568-206621:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:206878-207285:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:207829-207991:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:208611-208756:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:209229-209328:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:209510-209594:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:210005-210317:1:exon

LOC100221477
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC100221477
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myocyte-specific enhancer factor 2B isoform X2
translation: MGRKKIQISRILDQRNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSTNRLFQYASSDMDKVLLKYTEYSEPHESRTNSDILETLKRKGLGLESHELELEEGPEPPGDRGRRLGEGADLALARARFYSPVPLPEAAYGSSPPAPEAALGSGSSSPQGQGRSPTARAAAPKPPGRSPGPLPPGLGHPLFPAATLGRALATRMSPPLFLGAEGRRGECQGGLASGRSGGSVARPLFPGLQPLSPGSSGLPSHGLAAFPFLSPAPADFGAAEVPPPPGFLQPPAWQHPRDVAALGASSRIVPAEEPPAVPCASPQRHQAISIKSERVSPGLGCPPGTPQPPLTSLATLSEASRAPGDLQPRGDFAKGFFPPCAPGPPPAGQRVPVPARRGTPVDVWQR
SIO_010081: LOC100221477
subclass of: SO_0000673
so part of: LOC100221477
location: join(206568..206621,206878..207081,207154..207285,207829..207991,208611..208756,209229..209328,209510..209594,210005..210317)
location: region:206568-210317:1
so has part: feature:206568-206621:1:exon
so has part: feature:206878-207081:1:exon
so has part: feature:207154-207285:1:exon
so has part: feature:207829-207991:1:exon
so has part: feature:208611-208756:1:exon
so has part: feature:209229-209328:1:exon
so has part: feature:209510-209594:1:exon
so has part: feature:210005-210317:1:exon

XP_030112858.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:206568-206621:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:206878-207081:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:207154-207285:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:207829-207991:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:208611-208756:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:209229-209328:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:209510-209594:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:210005-210317:1:exon

TMEM161A
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: TMEM161A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 211620..247843
location: region:211620-247843:1
so has part: feature:211620-247843:1:exon
subclass of: SO_0000010

115490896
type: Gene
SIO_000068: ncbigene

position:211620:1
position: 211620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:247843:1
position: 247843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:211620-247843:1:exon

TMEM161A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: TMEM161A
product: transmembrane protein 161A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_030257048.3
SIO_010081: TMEM161A
subclass of: SO_0000673
so part of: TMEM161A
location: join(211620..211762,211914..211974,217493..217588,243178..243281,243510..243590,243689..243786,243968..244124,244419..244570,244782..244842,244960..245103,245547..245660,246126..246300,246776..246872,247214..247843)
location: region:211620-247843:1
so has part: feature:211620-211762:1:exon
so has part: feature:211914-211974:1:exon
so has part: feature:217493-217588:1:exon
so has part: feature:243178-243281:1:exon
so has part: feature:243510-243590:1:exon
so has part: feature:243689-243786:1:exon
so has part: feature:243968-244124:1:exon
so has part: feature:244419-244570:1:exon
so has part: feature:244782-244842:1:exon
so has part: feature:244960-245103:1:exon
so has part: feature:245547-245660:1:exon
so has part: feature:246126-246300:1:exon
so has part: feature:246776-246872:1:exon
so has part: feature:247214-247843:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:211620-211762:1:exon

position:211762:1
position: 211762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:211914-211974:1:exon

position:211914:1
position: 211914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:211974:1
position: 211974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:217493-217588:1:exon

position:217493:1
position: 217493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:217588:1
position: 217588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:243178-243281:1:exon

position:243178:1
position: 243178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:243281:1
position: 243281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:243510-243590:1:exon

position:243510:1
position: 243510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:243590:1
position: 243590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:243689-243786:1:exon

position:243689:1
position: 243689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:243786:1
position: 243786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:243968-244124:1:exon

position:243968:1
position: 243968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:244124:1
position: 244124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:244419-244570:1:exon

position:244419:1
position: 244419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:244570:1
position: 244570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:244782-244842:1:exon

position:244782:1
position: 244782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:244842:1
position: 244842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:244960-245103:1:exon

position:244960:1
position: 244960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:245103:1
position: 245103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:245547-245660:1:exon

position:245547:1
position: 245547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:245660:1
position: 245660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:246126-246300:1:exon

position:246126:1
position: 246126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:246300:1
position: 246300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:246776-246872:1:exon

position:246776:1
position: 246776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:246872:1
position: 246872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:247214-247843:1:exon

position:247214:1
position: 247214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TMEM161A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: TMEM161A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 161A isoform X1
translation: MATRWHGRSARKCQGEVGTAGRRRGHRTPGEAEVTAAVPPEHRRDAWQAVMGVQVVVTLLAASLMQKLAPHCSFARWLLCNGSLYRYKHPTDEELCALAGKQRPRSRRDRRAGGVAEDKELSVPCDIELQLDTSPITAVDALVLRYFLEYQWFVDFAVYAGAVYVFSEGYFCLASPARESNLGVLWCLLTLLFCLKVFLMVLRHYFRSEEGGERSVCLSAALFFLLLAMLALLVREEYLEFGLEAGLAGVAASLEPILKPRGWEWTLPLATLAFKVGLVALSSFLGACLTFPGLRLAQTHLDALSMARDRPLTQALLHVGFLAPVLVVLLWVRPLGRDFLRQAPLGRQPGQMLSDSAFDTLRLWAVVSLSLLRLLGTRHHLQAYLGLAQRWARRLRREAGRVPARMVQQRIARIYCYVSVVSLQYLGPVILTLHCALLLKTLGHHSWGLYPESPAVSPAAPVAPPRPEGDVDGDVQVVVQEISGVLGCIFTPLFFRGLFSFLTWWVAACQVVTSLFGLYFHQYLAAS
SIO_010081: TMEM161A
subclass of: SO_0000673
so part of: TMEM161A
location: join(211927..211974,217493..217588,243178..243281,243510..243590,243689..243786,243968..244124,244419..244570,244782..244842,244960..245103,245547..245660,246126..246300,246776..246872,247214..247470)
location: region:211927-247470:1
so has part: feature:211927-211974:1:exon
so has part: feature:217493-217588:1:exon
so has part: feature:243178-243281:1:exon
so has part: feature:243510-243590:1:exon
so has part: feature:243689-243786:1:exon
so has part: feature:243968-244124:1:exon
so has part: feature:244419-244570:1:exon
so has part: feature:244782-244842:1:exon
so has part: feature:244960-245103:1:exon
so has part: feature:245547-245660:1:exon
so has part: feature:246126-246300:1:exon
so has part: feature:246776-246872:1:exon
so has part: feature:247214-247470:1:exon

XP_030112908.3
type: Protein
SIO_000068: ncbiprotein

position:211927:1
position: 211927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:247470:1
position: 247470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:211927-211974:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:217493-217588:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:243178-243281:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:243510-243590:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:243689-243786:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:243968-244124:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:244419-244570:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:244782-244842:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:244960-245103:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:245547-245660:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:246126-246300:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:246776-246872:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:247214-247470:1:exon

LOC121468085
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121468085
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 237864..240081
location: region:237864-240081:1
so has part: feature:237864-240081:1:exon
subclass of: SO_0000011

121468085
type: Gene
SIO_000068: ncbigene

position:237864:1
position: 237864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:240081:1
position: 240081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:237864-240081:1:exon

LOC121468085
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC121468085
product: uncharacterized LOC121468085
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XR_005978041.1
SIO_010081: LOC121468085
subclass of: SO_0000673
so part of: LOC121468085
location: join(237864..238199,240040..240081)
location: region:237864-240081:1
so has part: feature:237864-238199:1:exon
so has part: feature:240040-240081:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:237864-238199:1:exon

position:238199:1
position: 238199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:240040-240081:1:exon

position:240040:1
position: 240040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TMEM161A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: TMEM161A
product: transmembrane protein 161A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 long SRA reads, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 55 samples with support for all annotated introns
transcript id: XM_030257046.3
SIO_010081: TMEM161A
subclass of: SO_0000673
so part of: TMEM161A
location: join(242874..242955,243178..243281,243510..243590,243689..243786,243968..244124,244419..244570,244782..244842,244960..245103,245547..245660,246126..246300,246776..246872,247214..247843)
location: region:242874-247843:1
so has part: feature:242874-242955:1:exon
so has part: feature:243178-243281:1:exon
so has part: feature:243510-243590:1:exon
so has part: feature:243689-243786:1:exon
so has part: feature:243968-244124:1:exon
so has part: feature:244419-244570:1:exon
so has part: feature:244782-244842:1:exon
so has part: feature:244960-245103:1:exon
so has part: feature:245547-245660:1:exon
so has part: feature:246126-246300:1:exon
so has part: feature:246776-246872:1:exon
so has part: feature:247214-247843:1:exon

position:242874:1
position: 242874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:242874-242955:1:exon

position:242955:1
position: 242955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:243178-243281:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:243510-243590:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:243689-243786:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:243968-244124:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:244419-244570:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:244782-244842:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:244960-245103:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:245547-245660:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:246126-246300:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:246776-246872:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:247214-247843:1:exon

TMEM161A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: TMEM161A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 161A isoform X2
translation: MAVMGVQVVVTLLAASLMQKLAPHCSFARWLLCNGSLYRYKHPTDEELCALAGKQRPRSRRDRRAGGVAEDKELSVPCDIELQLDTSPITAVDALVLRYFLEYQWFVDFAVYAGAVYVFSEGYFCLASPARESNLGVLWCLLTLLFCLKVFLMVLRHYFRSEEGGERSVCLSAALFFLLLAMLALLVREEYLEFGLEAGLAGVAASLEPILKPRGWEWTLPLATLAFKVGLVALSSFLGACLTFPGLRLAQTHLDALSMARDRPLTQALLHVGFLAPVLVVLLWVRPLGRDFLRQAPLGRQPGQMLSDSAFDTLRLWAVVSLSLLRLLGTRHHLQAYLGLAQRWARRLRREAGRVPARMVQQRIARIYCYVSVVSLQYLGPVILTLHCALLLKTLGHHSWGLYPESPAVSPAAPVAPPRPEGDVDGDVQVVVQEISGVLGCIFTPLFFRGLFSFLTWWVAACQVVTSLFGLYFHQYLAAS
SIO_010081: TMEM161A
subclass of: SO_0000673
so part of: TMEM161A
location: join(242953..242955,243178..243281,243510..243590,243689..243786,243968..244124,244419..244570,244782..244842,244960..245103,245547..245660,246126..246300,246776..246872,247214..247470)
location: region:242953-247470:1
so has part: feature:242953-242955:1:exon
so has part: feature:243178-243281:1:exon
so has part: feature:243510-243590:1:exon
so has part: feature:243689-243786:1:exon
so has part: feature:243968-244124:1:exon
so has part: feature:244419-244570:1:exon
so has part: feature:244782-244842:1:exon
so has part: feature:244960-245103:1:exon
so has part: feature:245547-245660:1:exon
so has part: feature:246126-246300:1:exon
so has part: feature:246776-246872:1:exon
so has part: feature:247214-247470:1:exon

XP_030112906.3
type: Protein
SIO_000068: ncbiprotein

position:242953:1
position: 242953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:242953-242955:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:243178-243281:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:243510-243590:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:243689-243786:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:243968-244124:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:244419-244570:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:244782-244842:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:244960-245103:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:245547-245660:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:246126-246300:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:246776-246872:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:247214-247470:1:exon

SLC25A42
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: SLC25A42
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(250712..266024)
location: region:250712-266024:-1
so has part: feature:250712-266024:-1:exon
subclass of: SO_0000010

105758952
type: Gene
SIO_000068: ncbigene

position:250712:-1
position: 250712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:266024:-1
position: 266024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:250712-266024:-1:exon

SLC25A42
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: SLC25A42
product: solute carrier family 25 member 42, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 73 samples with support for all annotated introns
transcript id: XM_030257051.3
SIO_010081: SLC25A42
subclass of: SO_0000673
so part of: SLC25A42
location: complement(join(250712..254024,255096..255275,255602..255718,256957..257123,258168..258193,260006..260117,261543..263294))
location: region:250712-263294:-1
so has part: feature:261543-263294:-1:exon
so has part: feature:260006-260117:-1:exon
so has part: feature:258168-258193:-1:exon
so has part: feature:256957-257123:-1:exon
so has part: feature:255602-255718:-1:exon
so has part: feature:255096-255275:-1:exon
so has part: feature:250712-254024:-1:exon

position:263294:-1
position: 263294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:261543-263294:-1:exon

position:261543:-1
position: 261543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:260006-260117:-1:exon

position:260006:-1
position: 260006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:260117:-1
position: 260117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:258168-258193:-1:exon

position:258168:-1
position: 258168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:258193:-1
position: 258193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:256957-257123:-1:exon

position:256957:-1
position: 256957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:257123:-1
position: 257123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:255602-255718:-1:exon

position:255602:-1
position: 255602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:255718:-1
position: 255718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:255096-255275:-1:exon

position:255096:-1
position: 255096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:255275:-1
position: 255275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:250712-254024:-1:exon

position:254024:-1
position: 254024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC25A42
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: SLC25A42
product: solute carrier family 25 member 42, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 48 samples with support for all annotated introns
transcript id: XM_030257052.3
SIO_010081: SLC25A42
subclass of: SO_0000673
so part of: SLC25A42
location: complement(join(250712..253857,255096..255247,255602..255718,256957..257123,258168..258193,260006..260117,261543..263289))
location: region:250712-263289:-1
so has part: feature:261543-263289:-1:exon
so has part: feature:260006-260117:-1:exon
so has part: feature:258168-258193:-1:exon
so has part: feature:256957-257123:-1:exon
so has part: feature:255602-255718:-1:exon
so has part: feature:255096-255247:-1:exon
so has part: feature:250712-253857:-1:exon

position:263289:-1
position: 263289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:261543-263289:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:260006-260117:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:258168-258193:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:256957-257123:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:255602-255718:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:255096-255247:-1:exon

position:255247:-1
position: 255247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:250712-253857:-1:exon

position:253857:-1
position: 253857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC25A42
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: SLC25A42
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial coenzyme A transporter SLC25A42 isoform X2
translation: MGNGVRGGPVELQRDVEPVPARIPAEESQEKEKVLNSLMSGALAGAVAKTAVAPLDRTKIMFQVSSKRFSAKEAYRLIYHTYLNEGFWSLWRGNSATMVRVIPYAAIQFCAHEEYKQILGNYYGFQGKALTPFPRFIAGSLAGTTAAMVTYPLDMVRARMAVTPKEMYSSIVHVFIRISREEGLKTLYRGFTPTILGVIPYAGLSFFTYETLKKVHAGHRPRGGAGARPVQRAQHELGEGPHRRGHQLHHLRPDADPAPQAAARPRPPEVVALWPTTCRKSSLFFPGLPRAPAAGNSPVCWGFFWFFLSFPGIFGFSLFNLEA
SIO_010081: SLC25A42
subclass of: SO_0000673
so part of: SLC25A42
location: complement(join(253538..253857,255096..255247,255602..255718,256957..257123,258168..258193,260006..260117,261543..261620))
location: region:253538-261620:-1
so has part: feature:261543-261620:-1:exon
so has part: feature:260006-260117:-1:exon
so has part: feature:258168-258193:-1:exon
so has part: feature:256957-257123:-1:exon
so has part: feature:255602-255718:-1:exon
so has part: feature:255096-255247:-1:exon
so has part: feature:253538-253857:-1:exon

XP_030112912.3
type: Protein
SIO_000068: ncbiprotein

position:253538:-1
position: 253538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:261620:-1
position: 261620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:261543-261620:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:260006-260117:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:258168-258193:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:256957-257123:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:255602-255718:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:255096-255247:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:253538-253857:-1:exon

SLC25A42
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: SLC25A42
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial coenzyme A transporter SLC25A42 isoform X1
translation: MGNGVRGGPVELQRDVEPVPARIPAEESQEKEKVLNSLMSGALAGAVAKTAVAPLDRTKIMFQVSSKRFSAKEAYRLIYHTYLNEGFWSLWRGNSATMVRVIPYAAIQFCAHEEYKQILGNYYGFQGKALTPFPRFIAGSLAGTTAAMVTYPLDMVRARMAVTPKEMSALPVSPRQVQQHCPRLHPDIPGGGAENLVQGLHAHHPGRHSLRWPQLLHLRDAEESARRAQREGAALAPGAAAVRGVRRPHRAVGLVPAGRGAAPHADGRRAGPQLQLHPAHHAGHRPRGGAGARPVQRAQHELGEGPHRRGHQLHHLRPDADPAPQAAARPRPPEVVALWPTTCRKSSLFFPGLPRAPAAGNSPVCWGFFWFFLSFPGIFGFSLFNLEA
SIO_010081: SLC25A42
subclass of: SO_0000673
so part of: SLC25A42
location: complement(join(253538..254024,255096..255275,255602..255718,256957..257123,258168..258193,260006..260117,261543..261620))
location: region:253538-261620:-1
so has part: feature:261543-261620:-1:exon
so has part: feature:260006-260117:-1:exon
so has part: feature:258168-258193:-1:exon
so has part: feature:256957-257123:-1:exon
so has part: feature:255602-255718:-1:exon
so has part: feature:255096-255275:-1:exon
so has part: feature:253538-254024:-1:exon

XP_030112911.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:261543-261620:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:260006-260117:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:258168-258193:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:256957-257123:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:255602-255718:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:255096-255275:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:253538-254024:-1:exon

SLC25A42
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: SLC25A42
product: solute carrier family 25 member 42, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 79 samples with support for all annotated introns
transcript id: XM_030257053.3
SIO_010081: SLC25A42
subclass of: SO_0000673
so part of: SLC25A42
location: complement(join(253550..254024,255096..255247,255602..255718,256957..257123,258168..258193,260006..260117,261543..261659,265950..266024))
location: region:253550-266024:-1
so has part: feature:265950-266024:-1:exon
so has part: feature:261543-261659:-1:exon
so has part: feature:260006-260117:-1:exon
so has part: feature:258168-258193:-1:exon
so has part: feature:256957-257123:-1:exon
so has part: feature:255602-255718:-1:exon
so has part: feature:255096-255247:-1:exon
so has part: feature:253550-254024:-1:exon

position:253550:-1
position: 253550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:265950-266024:-1:exon

position:265950:-1
position: 265950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:261543-261659:-1:exon

position:261659:-1
position: 261659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:260006-260117:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:258168-258193:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:256957-257123:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:255602-255718:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:255096-255247:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:253550-254024:-1:exon

SLC25A42
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: SLC25A42
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial coenzyme A transporter SLC25A42 isoform X3
translation: MGNGVRGGPVELQRDVEPVPARIPAEESQEKEKVLNSLMSGALAGAVAKTAVAPLDRTKIMFQVSSKRFSAKEAYRLIYHTYLNEGFWSLWRGNSATMVRVIPYAAIQFCAHEEYKQILGNYYGFQGKALTPFPRFIAGSLAGTTAAMVTYPLDMVRARMAVTPKEMYSSIVHVFIRISREEGLKTLYRGFTPTILGVIPYAGLSFFTYETLKKVHAEHSGKAQPSPPERLLFGACAGLIGQSASYPLDVVRRRMQTAGVLGHSYSSILLTMQDIVREEGLVRGLYKGLSMNWVKGPIAVGISFTTFDLTQILLRKLQRGPGLQR
SIO_010081: SLC25A42
subclass of: SO_0000673
so part of: SLC25A42
location: complement(join(253699..254024,255096..255247,255602..255718,256957..257123,258168..258193,260006..260117,261543..261620))
location: region:253699-261620:-1
so has part: feature:261543-261620:-1:exon
so has part: feature:260006-260117:-1:exon
so has part: feature:258168-258193:-1:exon
so has part: feature:256957-257123:-1:exon
so has part: feature:255602-255718:-1:exon
so has part: feature:255096-255247:-1:exon
so has part: feature:253699-254024:-1:exon

XP_030112913.3
type: Protein
SIO_000068: ncbiprotein

position:253699:-1
position: 253699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:261543-261620:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:260006-260117:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:258168-258193:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:256957-257123:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:255602-255718:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:255096-255247:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:253699-254024:-1:exon

ARMC6
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: ARMC6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(267651..274376)
location: region:267651-274376:-1
so has part: feature:267651-274376:-1:exon
subclass of: SO_0000010

100230923
type: Gene
SIO_000068: ncbigene

position:267651:-1
position: 267651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:274376:-1
position: 274376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:267651-274376:-1:exon

ARMC6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: ARMC6
product: armadillo repeat containing 6, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 94 samples with support for all annotated introns
transcript id: XM_030257049.3
SIO_010081: ARMC6
subclass of: SO_0000673
so part of: ARMC6
location: complement(join(267651..268084,269086..269223,269669..269800,270333..270478,271243..271801,272418..272497,272888..273017,274269..274376))
location: region:267651-274376:-1
so has part: feature:274269-274376:-1:exon
so has part: feature:272888-273017:-1:exon
so has part: feature:272418-272497:-1:exon
so has part: feature:271243-271801:-1:exon
so has part: feature:270333-270478:-1:exon
so has part: feature:269669-269800:-1:exon
so has part: feature:269086-269223:-1:exon
so has part: feature:267651-268084:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:274269-274376:-1:exon

position:274269:-1
position: 274269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:272888-273017:-1:exon

position:272888:-1
position: 272888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:273017:-1
position: 273017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:272418-272497:-1:exon

position:272418:-1
position: 272418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:272497:-1
position: 272497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:271243-271801:-1:exon

position:271243:-1
position: 271243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:271801:-1
position: 271801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:270333-270478:-1:exon

position:270333:-1
position: 270333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:270478:-1
position: 270478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:269669-269800:-1:exon

position:269669:-1
position: 269669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:269800:-1
position: 269800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:269086-269223:-1:exon

position:269086:-1
position: 269086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:269223:-1
position: 269223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:267651-268084:-1:exon

position:268084:-1
position: 268084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ARMC6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: ARMC6
product: armadillo repeat containing 6, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 79 samples with support for all annotated introns
transcript id: XM_030257050.3
SIO_010081: ARMC6
subclass of: SO_0000673
so part of: ARMC6
location: complement(join(267651..268084,269086..269223,269669..269800,270333..270478,271243..271801,272418..272497,272888..273017,273987..274086))
location: region:267651-274086:-1
so has part: feature:273987-274086:-1:exon
so has part: feature:272888-273017:-1:exon
so has part: feature:272418-272497:-1:exon
so has part: feature:271243-271801:-1:exon
so has part: feature:270333-270478:-1:exon
so has part: feature:269669-269800:-1:exon
so has part: feature:269086-269223:-1:exon
so has part: feature:267651-268084:-1:exon

position:274086:-1
position: 274086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:273987-274086:-1:exon

position:273987:-1
position: 273987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:272888-273017:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:272418-272497:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:271243-271801:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:270333-270478:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:269669-269800:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:269086-269223:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:267651-268084:-1:exon

ARMC6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: ARMC6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: armadillo repeat-containing protein 6
translation: MGSRQIAQETFDEAVQENITEFQMEPEEAVREAVQQFQSQGVDLSNIVKAVRPVSENGQRQKHQILLSLESLGRAVAEQDVAQLPELLAALAAQCKQEPACRCLAARHGAYPTLLSACQLAAGHGAALPAALGALAALLDGQPELLDAPGRELLLRGLREREAALAGLRCVRHACLRHEHNRQAFVSAGVLPLLTAAIAQHGGDAELVRAAAATLRAMTLDDDIRVPFGHAHEHARMIVLENDGLRVLIEAARAFRDDCGVLSELCATLSRLAVRNEFCQEIVDLGGLNFLVTLLADCVEHPDVVRQVLGALRAVAGNDDVKDAVVSAGATDLIVLAINRHLGNPQICEQGCAALCMLALRKPENCSVIVEGGGALAALQAMKAHPGEAAVQRQACMLLRNLVARSRELRGPILAMGAEPLIAEARALHRDCDDVARAALRDLGCHVELRELWTGQKGSLAQ
SIO_010081: ARMC6
subclass of: SO_0000673
so part of: ARMC6
location: complement(join(267872..268084,269086..269223,269669..269800,270333..270478,271243..271801,272418..272497,272888..273008))
location: region:267872-273008:-1
so has part: feature:272888-273008:-1:exon
so has part: feature:272418-272497:-1:exon
so has part: feature:271243-271801:-1:exon
so has part: feature:270333-270478:-1:exon
so has part: feature:269669-269800:-1:exon
so has part: feature:269086-269223:-1:exon
so has part: feature:267872-268084:-1:exon

XP_030112909.3
type: Protein
SIO_000068: ncbiprotein

position:267872:-1
position: 267872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:273008:-1
position: 273008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:272888-273008:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:272418-272497:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:271243-271801:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:270333-270478:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:269669-269800:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:269086-269223:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:267872-268084:-1:exon

ARMC6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: ARMC6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: armadillo repeat-containing protein 6
translation: MGSRQIAQETFDEAVQENITEFQMEPEEAVREAVQQFQSQGVDLSNIVKAVRPVSENGQRQKHQILLSLESLGRAVAEQDVAQLPELLAALAAQCKQEPACRCLAARHGAYPTLLSACQLAAGHGAALPAALGALAALLDGQPELLDAPGRELLLRGLREREAALAGLRCVRHACLRHEHNRQAFVSAGVLPLLTAAIAQHGGDAELVRAAAATLRAMTLDDDIRVPFGHAHEHARMIVLENDGLRVLIEAARAFRDDCGVLSELCATLSRLAVRNEFCQEIVDLGGLNFLVTLLADCVEHPDVVRQVLGALRAVAGNDDVKDAVVSAGATDLIVLAINRHLGNPQICEQGCAALCMLALRKPENCSVIVEGGGALAALQAMKAHPGEAAVQRQACMLLRNLVARSRELRGPILAMGAEPLIAEARALHRDCDDVARAALRDLGCHVELRELWTGQKGSLAQ
SIO_010081: ARMC6
subclass of: SO_0000673
so part of: ARMC6
location: complement(join(267872..268084,269086..269223,269669..269800,270333..270478,271243..271801,272418..272497,272888..273008))
location: region:267872-273008:-1
so has part: feature:272888-273008:-1:exon
so has part: feature:272418-272497:-1:exon
so has part: feature:271243-271801:-1:exon
so has part: feature:270333-270478:-1:exon
so has part: feature:269669-269800:-1:exon
so has part: feature:269086-269223:-1:exon
so has part: feature:267872-268084:-1:exon

XP_030112910.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:272888-273008:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:272418-272497:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:271243-271801:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:270333-270478:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:269669-269800:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:269086-269223:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:267872-268084:-1:exon

SUGP2
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: SUGP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 274921..287832
location: region:274921-287832:1
so has part: feature:274921-287832:1:exon
subclass of: SO_0000010

100218451
type: Gene
SIO_000068: ncbigene

position:274921:1
position: 274921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:287832:1
position: 287832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:274921-287832:1:exon

SUGP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: SUGP2
product: SURP and G-patch domain containing 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 48 samples with support for all annotated introns
transcript id: XM_030256632.3
SIO_010081: SUGP2
subclass of: SO_0000673
so part of: SUGP2
location: join(274921..275246,276171..277739,279105..279222,280324..280793,281769..281880,282919..283175,283295..283409,284649..284703)
location: region:274921-284703:1
so has part: feature:274921-275246:1:exon
so has part: feature:276171-277739:1:exon
so has part: feature:279105-279222:1:exon
so has part: feature:280324-280793:1:exon
so has part: feature:281769-281880:1:exon
so has part: feature:282919-283175:1:exon
so has part: feature:283295-283409:1:exon
so has part: feature:284649-284703:1:exon

position:284703:1
position: 284703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:274921-275246:1:exon

position:275246:1
position: 275246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:276171-277739:1:exon

position:276171:1
position: 276171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:277739:1
position: 277739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:279105-279222:1:exon

position:279105:1
position: 279105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:279222:1
position: 279222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:280324-280793:1:exon

position:280324:1
position: 280324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:280793:1
position: 280793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:281769-281880:1:exon

position:281769:1
position: 281769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:281880:1
position: 281880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:282919-283175:1:exon

position:282919:1
position: 282919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:283175:1
position: 283175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:283295-283409:1:exon

position:283295:1
position: 283295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:283409:1
position: 283409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:284649-284703:1:exon

position:284649:1
position: 284649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SUGP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: SUGP2
product: SURP and G-patch domain containing 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 51 samples with support for all annotated introns
transcript id: XM_030256631.3
SIO_010081: SUGP2
subclass of: SO_0000673
so part of: SUGP2
location: join(274926..275246,276171..277739,279105..279222,280324..280793,281769..281880,282919..283409,284649..284713,285004..285140,286215..286335,286841..287832)
location: region:274926-287832:1
so has part: feature:274926-275246:1:exon
so has part: feature:276171-277739:1:exon
so has part: feature:279105-279222:1:exon
so has part: feature:280324-280793:1:exon
so has part: feature:281769-281880:1:exon
so has part: feature:282919-283409:1:exon
so has part: feature:284649-284713:1:exon
so has part: feature:285004-285140:1:exon
so has part: feature:286215-286335:1:exon
so has part: feature:286841-287832:1:exon

position:274926:1
position: 274926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:274926-275246:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:276171-277739:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:279105-279222:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:280324-280793:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:281769-281880:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:282919-283409:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:284649-284713:1:exon

position:284713:1
position: 284713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:285004-285140:1:exon

position:285004:1
position: 285004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:285140:1
position: 285140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:286215-286335:1:exon

position:286215:1
position: 286215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:286335:1
position: 286335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:286841-287832:1:exon

position:286841:1
position: 286841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SUGP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: SUGP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SURP and G-patch domain-containing protein 2 isoform X1
translation: MASRRMPRPALEAAAQDKVPRYRLERSAAPGDAAHPFRAHSRPLPRPRYNESFHHDGRFPHANCQHEDWSEDPGEDYPGENYPGEDYPGENYPGENYPGENYPGENYPGPSYRAASPLLRKENYFHGHFSRPAPREQEFARDYGKFGRGAAPSREYGHHEYGQRDREYPQGYGPADSWEAGAGFGSPDVLGNFGPPGPVEEEFGGAEDPEYEEEFGAPPRRGGVGRGRVLRGKRPARGVVKPKVFKGELRSPLKKWGLKKAQPGLDADALDQPLDVAEPLQQRPGPQLPPHPGAAQRPVLRLPKPDHVSRSLSFDLVDKSDIFSTFGVEIIKWAGFHAIKNDAEFSRLFGALFELETETCAKMLASFKCSLRPEHRDYCFFTIRSLQHAALKTPKVDNEFLNMLLDKGAVKTKNCFFEIIKPFDKYIMRLQDRLLKGVTPLLMACNAYELSVKTNGFGHPGDVAGALETTVSLCRKSLALLGQTFALASVFRQEKILEAVGLQEMAPAPTAFPNFDDSTLFGREYIENLKAWLEKSGYPIQMKRGEAGAAEQLPAAAPGSKAPQRADRKVVDTIEQLVSSIVSGTLSAKDRSAQKNSPEYWFLCDEDSLEYKYYRLRLSEVQRRSQPGEEAAPESLRALLYARRVASIKRRLFKRKKKPGTALPRASRARRVRRASRATQTLLSAGTVLKQPDPNPPGPVQAQGAPTEPGVAPGAAQGAAQGASSCQVPMPGQDRASPEPSAASPEPLPAPGSPCADVDARSRDTAERLARFVAQEGPEMEQFSIAHSADSPELWFLQDPTSPAFQFYRRKVLELCPSITFSPEAAGAAPAAGTALQLQQDEEDEEEEEEEEEEEEEEEAEFEPSQPAEDEEDDEEDVAAGRRVADLEEELVSRAGEEMAGGDVRLSSPPDGAVPNLSTQAPGPAPGARFPRKRVSSKSLKVGLIPAPKRVCLVQEPKVHEPVRIAYDRPRGCPITKKKKKPKDPEVPPKRLSPRNVGFQMLQRMGWQEGHGLGTRGRGIREPVHLGATSAGEGLGVAGEENREDAFDVFRQRMMQMYRQKRASK
SIO_010081: SUGP2
subclass of: SO_0000673
so part of: SUGP2
location: join(275132..275246,276171..277739,279105..279222,280324..280793,281769..281880,282919..283409,284649..284713,285004..285140,286215..286335)
location: region:275132-286335:1
so has part: feature:275132-275246:1:exon
so has part: feature:276171-277739:1:exon
so has part: feature:279105-279222:1:exon
so has part: feature:280324-280793:1:exon
so has part: feature:281769-281880:1:exon
so has part: feature:282919-283409:1:exon
so has part: feature:284649-284713:1:exon
so has part: feature:285004-285140:1:exon
so has part: feature:286215-286335:1:exon

XP_030112491.3
type: Protein
SIO_000068: ncbiprotein

position:275132:1
position: 275132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:275132-275246:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:276171-277739:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:279105-279222:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:280324-280793:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:281769-281880:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:282919-283409:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:284649-284713:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:285004-285140:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:286215-286335:1:exon

SUGP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: SUGP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SURP and G-patch domain-containing protein 2 isoform X2
translation: MASRRMPRPALEAAAQDKVPRYRLERSAAPGDAAHPFRAHSRPLPRPRYNESFHHDGRFPHANCQHEDWSEDPGEDYPGENYPGEDYPGENYPGENYPGENYPGENYPGPSYRAASPLLRKENYFHGHFSRPAPREQEFARDYGKFGRGAAPSREYGHHEYGQRDREYPQGYGPADSWEAGAGFGSPDVLGNFGPPGPVEEEFGGAEDPEYEEEFGAPPRRGGVGRGRVLRGKRPARGVVKPKVFKGELRSPLKKWGLKKAQPGLDADALDQPLDVAEPLQQRPGPQLPPHPGAAQRPVLRLPKPDHVSRSLSFDLVDKSDIFSTFGVEIIKWAGFHAIKNDAEFSRLFGALFELETETCAKMLASFKCSLRPEHRDYCFFTIRSLQHAALKTPKVDNEFLNMLLDKGAVKTKNCFFEIIKPFDKYIMRLQDRLLKGVTPLLMACNAYELSVKTNGFGHPGDVAGALETTVSLCRKSLALLGQTFALASVFRQEKILEAVGLQEMAPAPTAFPNFDDSTLFGREYIENLKAWLEKSGYPIQMKRGEAGAAEQLPAAAPGSKAPQRADRKVVDTIEQLVSSIVSGTLSAKDRSAQKNSPEYWFLCDEDSLEYKYYRLRLSEVQRRSQPGEEAAPESLRALLYARRVASIKRRLFKRKKKPGTALPRASRARRVRRASRATQTLLSAGTVLKQPDPNPPGPVQAQGAPTEPGVAPGAAQGAAQGASSCQVPMPGQDRASPEPSAASPEPLPAPGSPCADVDARSRDTAERLARFVAQEGPEMEQFSIAHSADSPELWFLQDPTSPAFQFYRRKVLELCPSITFSPEAAGAAPAAGTALQLQQDEEDEEEEEEEEEEEEEEEAEFEPSQPAEDEEDDEEDVAAGTRPGPRRALPPQTRQLQVAEGGPDPRPQTGLPRPGAQSARTCQDCL
SIO_010081: SUGP2
subclass of: SO_0000673
so part of: SUGP2
location: join(275132..275246,276171..277739,279105..279222,280324..280793,281769..281880,282919..283175,283295..283409,284649..284676)
location: region:275132-284676:1
so has part: feature:275132-275246:1:exon
so has part: feature:276171-277739:1:exon
so has part: feature:279105-279222:1:exon
so has part: feature:280324-280793:1:exon
so has part: feature:281769-281880:1:exon
so has part: feature:282919-283175:1:exon
so has part: feature:283295-283409:1:exon
so has part: feature:284649-284676:1:exon

XP_030112492.3
type: Protein
SIO_000068: ncbiprotein

position:284676:1
position: 284676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:275132-275246:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:276171-277739:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:279105-279222:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:280324-280793:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:281769-281880:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:282919-283175:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:283295-283409:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:284649-284676:1:exon

HOMER3
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: HOMER3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 290575..307223
location: region:290575-307223:1
so has part: feature:290575-307223:1:exon
subclass of: SO_0000010

115490807
type: Gene
SIO_000068: ncbigene

position:290575:1
position: 290575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:307223:1
position: 307223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:290575-307223:1:exon

HOMER3
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 59729
gene: HOMER3
product: homer scaffold protein 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_005978000.1
SIO_010081: HOMER3
so part of: HOMER3
location: join(290575..290622,297355..297482,298758..298914,299494..299625,300246..300353,301349..301470,302461..302617,303139..304583,304663..304773)
location: region:290575-304773:1
so has part: feature:290575-290622:1:exon
so has part: feature:297355-297482:1:exon
so has part: feature:298758-298914:1:exon
so has part: feature:299494-299625:1:exon
so has part: feature:300246-300353:1:exon
so has part: feature:301349-301470:1:exon
so has part: feature:302461-302617:1:exon
so has part: feature:303139-304583:1:exon
so has part: feature:304663-304773:1:exon

position:304773:1
position: 304773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:290575-290622:1:exon

position:290622:1
position: 290622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:297355-297482:1:exon

position:297355:1
position: 297355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:297482:1
position: 297482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:298758-298914:1:exon

position:298758:1
position: 298758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:298914:1
position: 298914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:299494-299625:1:exon

position:299494:1
position: 299494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:299625:1
position: 299625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:300246-300353:1:exon

position:300246:1
position: 300246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:300353:1
position: 300353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:301349-301470:1:exon

position:301349:1
position: 301349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:301470:1
position: 301470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:302461-302617:1:exon

position:302461:1
position: 302461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:302617:1
position: 302617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:303139-304583:1:exon

position:303139:1
position: 303139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:304583:1
position: 304583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:304663-304773:1:exon

position:304663:1
position: 304663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HOMER3
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 59729
gene: HOMER3
product: homer scaffold protein 3, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_005978002.1
SIO_010081: HOMER3
so part of: HOMER3
location: join(290636..291181,298758..298914,299494..299625,300246..300353,301349..301470,302461..302617,303139..304583,304663..304773)
location: region:290636-304773:1
so has part: feature:290636-291181:1:exon
so has part: feature:298758-298914:1:exon
so has part: feature:299494-299625:1:exon
so has part: feature:300246-300353:1:exon
so has part: feature:301349-301470:1:exon
so has part: feature:302461-302617:1:exon
so has part: feature:303139-304583:1:exon
so has part: feature:304663-304773:1:exon

position:290636:1
position: 290636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:290636-291181:1:exon

position:291181:1
position: 291181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:298758-298914:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:299494-299625:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:300246-300353:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:301349-301470:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:302461-302617:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:303139-304583:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:304663-304773:1:exon

HOMER3
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 59729
gene: HOMER3
product: homer scaffold protein 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_005977998.1
SIO_010081: HOMER3
so part of: HOMER3
location: join(290662..291181,297355..297482,298758..298914,299494..299625,300246..300353,301349..301470,302461..302617,303139..304583,304663..304773)
location: region:290662-304773:1
so has part: feature:290662-291181:1:exon
so has part: feature:297355-297482:1:exon
so has part: feature:298758-298914:1:exon
so has part: feature:299494-299625:1:exon
so has part: feature:300246-300353:1:exon
so has part: feature:301349-301470:1:exon
so has part: feature:302461-302617:1:exon
so has part: feature:303139-304583:1:exon
so has part: feature:304663-304773:1:exon

position:290662:1
position: 290662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:290662-291181:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:297355-297482:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:298758-298914:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:299494-299625:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:300246-300353:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:301349-301470:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:302461-302617:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:303139-304583:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:304663-304773:1:exon

HOMER3
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 59729
gene: HOMER3
product: homer scaffold protein 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_005978001.1
SIO_010081: HOMER3
so part of: HOMER3
location: join(290662..291181,297355..297482,298758..298914,299494..299625,300246..300353,301349..301470,302461..302617,303142..304583,304663..304773)
location: region:290662-304773:1
so has part: feature:290662-291181:1:exon
so has part: feature:297355-297482:1:exon
so has part: feature:298758-298914:1:exon
so has part: feature:299494-299625:1:exon
so has part: feature:300246-300353:1:exon
so has part: feature:301349-301470:1:exon
so has part: feature:302461-302617:1:exon
so has part: feature:303142-304583:1:exon
so has part: feature:304663-304773:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:290662-291181:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:297355-297482:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:298758-298914:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:299494-299625:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:300246-300353:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:301349-301470:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:302461-302617:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:303142-304583:1:exon

position:303142:1
position: 303142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:304663-304773:1:exon

HOMER3
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 59729
gene: HOMER3
product: homer scaffold protein 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_005977999.1
SIO_010081: HOMER3
so part of: HOMER3
location: join(290662..291181,297358..297482,298758..298914,299494..299625,300246..300353,301349..301470,302461..302617,303139..304583,304663..304773)
location: region:290662-304773:1
so has part: feature:290662-291181:1:exon
so has part: feature:297358-297482:1:exon
so has part: feature:298758-298914:1:exon
so has part: feature:299494-299625:1:exon
so has part: feature:300246-300353:1:exon
so has part: feature:301349-301470:1:exon
so has part: feature:302461-302617:1:exon
so has part: feature:303139-304583:1:exon
so has part: feature:304663-304773:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:290662-291181:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:297358-297482:1:exon

position:297358:1
position: 297358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:298758-298914:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:299494-299625:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:300246-300353:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:301349-301470:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:302461-302617:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:303139-304583:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:304663-304773:1:exon

HOMER3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: HOMER3
product: homer scaffold protein 3, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 2 long SRA reads, 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_030256633.3
SIO_010081: HOMER3
subclass of: SO_0000673
so part of: HOMER3
location: join(290682..291181,297355..297482,298758..298914,299494..299625,300246..300353,301349..301470,302461..302617,304663..304773,305357..305437,305912..307223)
location: region:290682-307223:1
so has part: feature:290682-291181:1:exon
so has part: feature:297355-297482:1:exon
so has part: feature:298758-298914:1:exon
so has part: feature:299494-299625:1:exon
so has part: feature:300246-300353:1:exon
so has part: feature:301349-301470:1:exon
so has part: feature:302461-302617:1:exon
so has part: feature:304663-304773:1:exon
so has part: feature:305357-305437:1:exon
so has part: feature:305912-307223:1:exon

position:290682:1
position: 290682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:290682-291181:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:297355-297482:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:298758-298914:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:299494-299625:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:300246-300353:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:301349-301470:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:302461-302617:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:304663-304773:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:305357-305437:1:exon

position:305357:1
position: 305357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:305437:1
position: 305437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:305912-307223:1:exon

position:305912:1
position: 305912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HOMER3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: HOMER3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homer protein homolog 3
translation: MSATREQPIFSTRAHVFQIDPATKRNWIPASKHALTVSYFYDATRSVYRIISVGGTKAIINSTVTPNMTFTKTSQKFGQWADSRANTVYGLGFASEQHLAQFAEKFQEVKEAARLAREKSQDKTELTNPALSITSHQVLPSPIISSNGPGEDKLFRSQSADVEITTEKERLKKMLSEGSVSEVQWEAEFFSLQDNNTKLVAALHEANASVEQWKKQLAAYQEETESLRQRVAELEAQGTPDSCGDSSKEELSQSLEELELLVKAKDEEIQLLKSQRCGRWEAEGEREETLQKLQELEARNAELERRLQLAEQSLAESLADREKVQHEVAKVAEMMDVKVFELSELRQGLAKLLESN
SIO_010081: HOMER3
subclass of: SO_0000673
so part of: HOMER3
location: join(297469..297482,298758..298914,299494..299625,300246..300353,301349..301470,302461..302617,304663..304773,305357..305437,305912..306100)
location: region:297469-306100:1
so has part: feature:297469-297482:1:exon
so has part: feature:298758-298914:1:exon
so has part: feature:299494-299625:1:exon
so has part: feature:300246-300353:1:exon
so has part: feature:301349-301470:1:exon
so has part: feature:302461-302617:1:exon
so has part: feature:304663-304773:1:exon
so has part: feature:305357-305437:1:exon
so has part: feature:305912-306100:1:exon

XP_030112493.1
type: Protein
SIO_000068: ncbiprotein

position:297469:1
position: 297469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:306100:1
position: 306100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:297469-297482:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:298758-298914:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:299494-299625:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:300246-300353:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:301349-301470:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:302461-302617:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:304663-304773:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:305357-305437:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:305912-306100:1:exon

DDX49
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: DDX49
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(307817..315561)
location: region:307817-315561:-1
so has part: feature:307817-315561:-1:exon
subclass of: SO_0000010

100221294
type: Gene
SIO_000068: ncbigene

position:307817:-1
position: 307817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:315561:-1
position: 315561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:307817-315561:-1:exon

DDX49
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: DDX49
product: DEAD-box helicase 49
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 91 samples with support for all annotated introns
transcript id: XM_041710949.1
SIO_010081: DDX49
subclass of: SO_0000673
so part of: DDX49
location: complement(join(307817..308276,309334..309405,309621..309709,310301..310375,310691..310788,311518..311594,311672..311747,312040..312180,313089..313276,314321..314442,314860..314945,315179..315302,315430..315561))
location: region:307817-315561:-1
so has part: feature:315430-315561:-1:exon
so has part: feature:315179-315302:-1:exon
so has part: feature:314860-314945:-1:exon
so has part: feature:314321-314442:-1:exon
so has part: feature:313089-313276:-1:exon
so has part: feature:312040-312180:-1:exon
so has part: feature:311672-311747:-1:exon
so has part: feature:311518-311594:-1:exon
so has part: feature:310691-310788:-1:exon
so has part: feature:310301-310375:-1:exon
so has part: feature:309621-309709:-1:exon
so has part: feature:309334-309405:-1:exon
so has part: feature:307817-308276:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:315430-315561:-1:exon

position:315430:-1
position: 315430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:315179-315302:-1:exon

position:315179:-1
position: 315179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:315302:-1
position: 315302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:314860-314945:-1:exon

position:314860:-1
position: 314860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:314945:-1
position: 314945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:314321-314442:-1:exon

position:314321:-1
position: 314321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:314442:-1
position: 314442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:313089-313276:-1:exon

position:313089:-1
position: 313089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:313276:-1
position: 313276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:312040-312180:-1:exon

position:312040:-1
position: 312040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:312180:-1
position: 312180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:311672-311747:-1:exon

position:311672:-1
position: 311672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:311747:-1
position: 311747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:311518-311594:-1:exon

position:311518:-1
position: 311518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:311594:-1
position: 311594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:310691-310788:-1:exon

position:310691:-1
position: 310691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:310788:-1
position: 310788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:310301-310375:-1:exon

position:310301:-1
position: 310301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:310375:-1
position: 310375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:309621-309709:-1:exon

position:309621:-1
position: 309621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:309709:-1
position: 309709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:309334-309405:-1:exon

position:309334:-1
position: 309334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:309405:-1
position: 309405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:307817-308276:-1:exon

position:308276:-1
position: 308276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DDX49
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: DDX49
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable ATP-dependent RNA helicase DDX49
translation: MAAFRALGLAPWLAEQARQMGLLRPTPVQAACIPAVLQGRDCLGCAQTGSGKTAAFVLPVLQRLSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCVVVGGLDMVAQALELARRPHVVIATPGRLADHLRSSSTFSLAKVQFLVLDEADRLLEQGSADFSADLELILGAVPARRQTLLFSATLTATLGQLRALAANSPFFWEATAPVKTVEELEQRYLLVPEALKDAYLVHLVQSFQDQHEDWAIIIFTKTCKDCQVLNMMLRKFSFPSVALHSMMKQKQRFAALAKFKSSIFKILIATDVAARGLDIPAVQVVINHNTPGLPRIYIHRVGRTARAGRQGLAITLVTQYDIHLVHAIEEEIKLQLQEFPVQEQEVLQILTHVNVTRRECEIELEGTDFDEKKEINKRKQLILEGKDPERAARGRAELAGIRRRNRECREKARQSLERRRQLRLSRKRQRGVERRRRRMERQQEEQQ
SIO_010081: DDX49
subclass of: SO_0000673
so part of: DDX49
location: complement(join(308091..308276,309334..309405,309621..309709,310301..310375,310691..310788,311518..311594,311672..311747,312040..312180,313089..313276,314321..314442,314860..314945,315179..315302,315430..315544))
location: region:308091-315544:-1
so has part: feature:315430-315544:-1:exon
so has part: feature:315179-315302:-1:exon
so has part: feature:314860-314945:-1:exon
so has part: feature:314321-314442:-1:exon
so has part: feature:313089-313276:-1:exon
so has part: feature:312040-312180:-1:exon
so has part: feature:311672-311747:-1:exon
so has part: feature:311518-311594:-1:exon
so has part: feature:310691-310788:-1:exon
so has part: feature:310301-310375:-1:exon
so has part: feature:309621-309709:-1:exon
so has part: feature:309334-309405:-1:exon
so has part: feature:308091-308276:-1:exon

XP_041566883.1
type: Protein
SIO_000068: ncbiprotein

position:308091:-1
position: 308091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:315544:-1
position: 315544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:315430-315544:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:315179-315302:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:314860-314945:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:314321-314442:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:313089-313276:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:312040-312180:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:311672-311747:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:311518-311594:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:310691-310788:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:310301-310375:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:309621-309709:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:309334-309405:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:308091-308276:-1:exon

COPE
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: COPE
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 315696..322428
location: region:315696-322428:1
so has part: feature:315696-322428:1:exon
subclass of: SO_0000010

100217565
type: Gene
SIO_000068: ncbigene

position:315696:1
position: 315696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:322428:1
position: 322428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:315696-322428:1:exon

COPE
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: COPE
product: COPI coat complex subunit epsilon
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 ESTs, 8 long SRA reads, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 153 samples with support for all annotated introns
transcript id: XM_041710976.1
SIO_010081: COPE
subclass of: SO_0000673
so part of: COPE
location: join(315696..315850,316127..316189,317032..317132,317806..317958,318794..318847,319068..319149,319682..319837,320423..320491,321010..321084,321575..322428)
location: region:315696-322428:1
so has part: feature:315696-315850:1:exon
so has part: feature:316127-316189:1:exon
so has part: feature:317032-317132:1:exon
so has part: feature:317806-317958:1:exon
so has part: feature:318794-318847:1:exon
so has part: feature:319068-319149:1:exon
so has part: feature:319682-319837:1:exon
so has part: feature:320423-320491:1:exon
so has part: feature:321010-321084:1:exon
so has part: feature:321575-322428:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:315696-315850:1:exon

position:315850:1
position: 315850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:316127-316189:1:exon

position:316127:1
position: 316127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:316189:1
position: 316189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:317032-317132:1:exon

position:317032:1
position: 317032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:317132:1
position: 317132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:317806-317958:1:exon

position:317806:1
position: 317806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:317958:1
position: 317958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:318794-318847:1:exon

position:318794:1
position: 318794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:318847:1
position: 318847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:319068-319149:1:exon

position:319068:1
position: 319068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:319149:1
position: 319149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:319682-319837:1:exon

position:319682:1
position: 319682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:319837:1
position: 319837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:320423-320491:1:exon

position:320423:1
position: 320423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:320491:1
position: 320491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:321010-321084:1:exon

position:321010:1
position: 321010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:321084:1
position: 321084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:321575-322428:1:exon

position:321575:1
position: 321575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

COPE
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: COPE
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coatomer subunit epsilon
translation: MAAPAAEPDELFDLRNNFYIGAYQAAINEAQRAKPRSPEQALQRDVFLFRAYIAQRKFGVVLEELQGSCSPELQAVRMLAQFLASESQRDSIVAELDKKMAKSVEVANCTFLLLAASIYLHDQNPEAALRALHQGDSLECLAMTVQILLKLDRLDLARKELKKMQEQDEDATLTQLATAWVNLALGGEKLQDAFYTFQELAERGCPSLLLLNGQAAAAMGQGRWEQAEGLLQEALDKDSGHPETLLNLVVLSQHLGKAPEVTNRYLSQLKDAHKNHPFIKEYQAKENDFDRLALQYAPSA
SIO_010081: COPE
subclass of: SO_0000673
so part of: COPE
location: join(315749..315850,316127..316189,317032..317132,317806..317958,318794..318847,319068..319149,319682..319837,320423..320491,321010..321084,321575..321622)
location: region:315749-321622:1
so has part: feature:315749-315850:1:exon
so has part: feature:316127-316189:1:exon
so has part: feature:317032-317132:1:exon
so has part: feature:317806-317958:1:exon
so has part: feature:318794-318847:1:exon
so has part: feature:319068-319149:1:exon
so has part: feature:319682-319837:1:exon
so has part: feature:320423-320491:1:exon
so has part: feature:321010-321084:1:exon
so has part: feature:321575-321622:1:exon

XP_041566910.1
type: Protein
SIO_000068: ncbiprotein

position:315749:1
position: 315749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:321622:1
position: 321622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:315749-315850:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:316127-316189:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:317032-317132:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:317806-317958:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:318794-318847:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:319068-319149:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:319682-319837:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:320423-320491:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:321010-321084:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:321575-321622:1:exon

CERS1
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: CERS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 323471..333725
location: region:323471-333725:1
so has part: feature:323471-333725:1:exon
subclass of: SO_0000010

100230030
type: Gene
SIO_000068: ncbigene

position:323471:1
position: 323471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:333725:1
position: 333725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:323471-333725:1:exon

CERS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: CERS1
product: ceramide synthase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 88 samples with support for all annotated introns
transcript id: XM_030257151.3
SIO_010081: CERS1
subclass of: SO_0000673
so part of: CERS1
location: join(323471..323862,329165..329324,330164..330344,330737..330898,331885..332032,332623..332759,333177..333725)
location: region:323471-333725:1
so has part: feature:323471-323862:1:exon
so has part: feature:329165-329324:1:exon
so has part: feature:330164-330344:1:exon
so has part: feature:330737-330898:1:exon
so has part: feature:331885-332032:1:exon
so has part: feature:332623-332759:1:exon
so has part: feature:333177-333725:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:323471-323862:1:exon

position:323862:1
position: 323862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:329165-329324:1:exon

position:329165:1
position: 329165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:329324:1
position: 329324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:330164-330344:1:exon

position:330164:1
position: 330164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:330344:1
position: 330344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:330737-330898:1:exon

position:330737:1
position: 330737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:330898:1
position: 330898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:331885-332032:1:exon

position:331885:1
position: 331885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:332032:1
position: 332032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:332623-332759:1:exon

position:332623:1
position: 332623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:332759:1
position: 332759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:333177-333725:1:exon

position:333177:1
position: 333177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CERS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: CERS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ceramide synthase 1
translation: MPPPEPMPGYGELLRRGYGSLAAAARGCGDCGWRLALRTWAENAHLGWAELLLCGLCALGWTALRRACSRRLFRPFGEWCQLQPRDAAKMPESAWKLLFYSVSWSYGAYLLFCTEYPFFHDPPAAFRGWQRGMAVPADIALAYLLQGSFYGHALYATAYMDTWRKDSLVMLLHHVVALTLIASSYAFRYHNVGILVLFLHDVNDVQLEFTKLNVYFKHRAGVYHRLNDIVSNIGCLAFSVSWFWFRLYWFPLKVLYATCHSSLQAVPNIPFYFFFNALLLVLTLMNIYWFLYIVLFVAKVLLGQMQEVNDVREYDVEESRKAGKEAGIPLPPALKEGLHLKNGLVKDKRL
SIO_010081: CERS1
subclass of: SO_0000673
so part of: CERS1
location: join(323641..323862,329165..329324,330164..330344,330737..330898,331885..332032,332623..332759,333177..333219)
location: region:323641-333219:1
so has part: feature:323641-323862:1:exon
so has part: feature:329165-329324:1:exon
so has part: feature:330164-330344:1:exon
so has part: feature:330737-330898:1:exon
so has part: feature:331885-332032:1:exon
so has part: feature:332623-332759:1:exon
so has part: feature:333177-333219:1:exon

XP_030113011.1
type: Protein
SIO_000068: ncbiprotein

position:323641:1
position: 323641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:333219:1
position: 333219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:323641-323862:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:329165-329324:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:330164-330344:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:330737-330898:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:331885-332032:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:332623-332759:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:333177-333219:1:exon

GDF1
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: GDF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 333870..338452
location: region:333870-338452:1
so has part: feature:333870-338452:1:exon
subclass of: SO_0000010

100227213
type: Gene
SIO_000068: ncbigene

position:333870:1
position: 333870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:338452:1
position: 338452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:333870-338452:1:exon

GDF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: GDF1
product: growth differentiation factor 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 1 long SRA read, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 79 samples with support for all annotated introns
transcript id: XM_030257150.3
SIO_010081: GDF1
subclass of: SO_0000673
so part of: GDF1
location: join(333870..334988,335967..338452)
location: region:333870-338452:1
so has part: feature:333870-334988:1:exon
so has part: feature:335967-338452:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:333870-334988:1:exon

position:334988:1
position: 334988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:335967-338452:1:exon

position:335967:1
position: 335967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GDF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: GDF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: embryonic growth/differentiation factor 1
translation: MWLLRSLAWALLSPLLAGLGPQESALLRSLGLSAKPSPRSPGPVPPVLWRIFHKGRTLPRPGGEPEPCRVEEFNVPGNIVRVFADQGRFLPEGQPQGRLCLRKLLFFNLSALQEGERLTMAQLELQFHHNSYHWPSPGQVLELRLYRASPRGLPRPGRSPLVERSFVQLRKSLLLDLSAALKDGTAPGRNLALVLEISASGDGGTVRGPCAGSDAFAATSLLLVTLGPRCRAARSRRSAPSPPLTPSPLCKPRRLYISFSDVGWENWIIAPQGYLANYCGGECPFPLAAELNSTNHAVLQTMVHSLDPQGTPQPCCVPVRLSPISILYYDNSDNVVLRHYEDMVVDECGCR
SIO_010081: GDF1
subclass of: SO_0000673
so part of: GDF1
location: join(334730..334988,335967..336763)
location: region:334730-336763:1
so has part: feature:334730-334988:1:exon
so has part: feature:335967-336763:1:exon

XP_030113010.3
type: Protein
SIO_000068: ncbiprotein

position:334730:1
position: 334730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:336763:1
position: 336763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:334730-334988:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:335967-336763:1:exon

UPF1
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: UPF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(338443..362783)
location: region:338443-362783:-1
so has part: feature:338443-362783:-1:exon
subclass of: SO_0000010

100223354
type: Gene
SIO_000068: ncbigene

position:338443:-1
position: 338443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:362783:-1
position: 362783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:338443-362783:-1:exon

UPF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: UPF1
product: UPF1 RNA helicase and ATPase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 ESTs, 10 long SRA reads, 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 106 samples with support for all annotated introns
transcript id: XM_030257130.3
SIO_010081: UPF1
subclass of: SO_0000673
so part of: UPF1
location: complement(join(338443..340894,341291..341413,341742..341959,342667..342828,343442..343523,344169..344343,345002..345144,346024..346180,347183..347300,348069..348282,349209..349352,349951..350065,350245..350409,350677..350795,350884..351043,351822..351930,352138..352236,352380..352464,353067..353228,353691..353871,354667..354834,355996..356085,356420..356562,362207..362783))
location: region:338443-362783:-1
so has part: feature:362207-362783:-1:exon
so has part: feature:356420-356562:-1:exon
so has part: feature:355996-356085:-1:exon
so has part: feature:354667-354834:-1:exon
so has part: feature:353691-353871:-1:exon
so has part: feature:353067-353228:-1:exon
so has part: feature:352380-352464:-1:exon
so has part: feature:352138-352236:-1:exon
so has part: feature:351822-351930:-1:exon
so has part: feature:350884-351043:-1:exon
so has part: feature:350677-350795:-1:exon
so has part: feature:350245-350409:-1:exon
so has part: feature:349951-350065:-1:exon
so has part: feature:349209-349352:-1:exon
so has part: feature:348069-348282:-1:exon
so has part: feature:347183-347300:-1:exon
so has part: feature:346024-346180:-1:exon
so has part: feature:345002-345144:-1:exon
so has part: feature:344169-344343:-1:exon
so has part: feature:343442-343523:-1:exon
so has part: feature:342667-342828:-1:exon
so has part: feature:341742-341959:-1:exon
so has part: feature:341291-341413:-1:exon
so has part: feature:338443-340894:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:362207-362783:-1:exon

position:362207:-1
position: 362207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:356420-356562:-1:exon

position:356420:-1
position: 356420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:356562:-1
position: 356562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:355996-356085:-1:exon

position:355996:-1
position: 355996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:356085:-1
position: 356085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:354667-354834:-1:exon

position:354667:-1
position: 354667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:354834:-1
position: 354834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:353691-353871:-1:exon

position:353691:-1
position: 353691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:353871:-1
position: 353871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:353067-353228:-1:exon

position:353067:-1
position: 353067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:353228:-1
position: 353228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:352380-352464:-1:exon

position:352380:-1
position: 352380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:352464:-1
position: 352464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:352138-352236:-1:exon

position:352138:-1
position: 352138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:352236:-1
position: 352236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:351822-351930:-1:exon

position:351822:-1
position: 351822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:351930:-1
position: 351930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:350884-351043:-1:exon

position:350884:-1
position: 350884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:351043:-1
position: 351043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:350677-350795:-1:exon

position:350677:-1
position: 350677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:350795:-1
position: 350795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:350245-350409:-1:exon

position:350245:-1
position: 350245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:350409:-1
position: 350409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:349951-350065:-1:exon

position:349951:-1
position: 349951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:350065:-1
position: 350065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:349209-349352:-1:exon

position:349209:-1
position: 349209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:349352:-1
position: 349352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:348069-348282:-1:exon

position:348069:-1
position: 348069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:348282:-1
position: 348282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:347183-347300:-1:exon

position:347183:-1
position: 347183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:347300:-1
position: 347300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:346024-346180:-1:exon

position:346024:-1
position: 346024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:346180:-1
position: 346180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:345002-345144:-1:exon

position:345002:-1
position: 345002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:345144:-1
position: 345144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:344169-344343:-1:exon

position:344169:-1
position: 344169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:344343:-1
position: 344343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:343442-343523:-1:exon

position:343442:-1
position: 343442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:343523:-1
position: 343523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:342667-342828:-1:exon

position:342667:-1
position: 342667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:342828:-1
position: 342828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:341742-341959:-1:exon

position:341742:-1
position: 341742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:341959:-1
position: 341959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:341291-341413:-1:exon

position:341291:-1
position: 341291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:341413:-1
position: 341413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:338443-340894:-1:exon

position:340894:-1
position: 340894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

UPF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: UPF1
product: UPF1 RNA helicase and ATPase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 ESTs, 4 long SRA reads, 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 102 samples with support for all annotated introns
transcript id: XM_030257129.3
SIO_010081: UPF1
subclass of: SO_0000673
so part of: UPF1
location: complement(join(338443..340894,341291..341413,341742..341959,342667..342828,343442..343523,344169..344343,345002..345144,346024..346180,347183..347300,348069..348282,349209..349352,349951..350065,350245..350409,350677..350795,350884..351043,351822..351939,352138..352236,352380..352464,353067..353228,353691..353871,354667..354834,355996..356085,356420..356562,362207..362783))
location: region:338443-362783:-1
so has part: feature:362207-362783:-1:exon
so has part: feature:356420-356562:-1:exon
so has part: feature:355996-356085:-1:exon
so has part: feature:354667-354834:-1:exon
so has part: feature:353691-353871:-1:exon
so has part: feature:353067-353228:-1:exon
so has part: feature:352380-352464:-1:exon
so has part: feature:352138-352236:-1:exon
so has part: feature:351822-351939:-1:exon
so has part: feature:350884-351043:-1:exon
so has part: feature:350677-350795:-1:exon
so has part: feature:350245-350409:-1:exon
so has part: feature:349951-350065:-1:exon
so has part: feature:349209-349352:-1:exon
so has part: feature:348069-348282:-1:exon
so has part: feature:347183-347300:-1:exon
so has part: feature:346024-346180:-1:exon
so has part: feature:345002-345144:-1:exon
so has part: feature:344169-344343:-1:exon
so has part: feature:343442-343523:-1:exon
so has part: feature:342667-342828:-1:exon
so has part: feature:341742-341959:-1:exon
so has part: feature:341291-341413:-1:exon
so has part: feature:338443-340894:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:362207-362783:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:356420-356562:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:355996-356085:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:354667-354834:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:353691-353871:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:353067-353228:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:352380-352464:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:352138-352236:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:351822-351939:-1:exon

position:351939:-1
position: 351939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:350884-351043:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:350677-350795:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:350245-350409:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:349951-350065:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:349209-349352:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:348069-348282:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:347183-347300:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:346024-346180:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:345002-345144:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:344169-344343:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:343442-343523:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:342667-342828:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:341742-341959:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:341291-341413:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:338443-340894:-1:exon

UPF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: UPF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: regulator of nonsense transcripts 1 isoform X2
translation: MSVEAYGPSSQTLTFLDTEEAELLGADTQGSEFEFTDFTLPSQTQTPPGPGQAGPAQGQGPPGAGQGAPGPLEAQVNGPDGILQNGAVDENVAKTSQLLAELNFEEDEEDTYYTKDLPVHACSYCGIHDPACVVYCNTSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLGFIPAKADSVVVLLCRQPCASQSSLKDINWDSSQWQPLIQDRCFLSWLVKIPSEQEQLRARQITAQQINKLEELWKENPSATLEDLEKPGVDEEPQHVLLRYEDAYQYQNIFGPLVKLEADYDKKLKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSDMRLMQGDEICLRYKGDLAPLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLVEGPLNNLRESLMQFSKPRKLVNTINPGARFMTTAMYDAREAIIPGSVYDRSSQGRPSNMYFQTHDQIGMISAGPSHVTAMNIPIPFNLVMPPMPPPGYFGQANGPAAGRGAPKGKTGRGGRQKNRFGIPGTSQSNLPNSQASQDVVSQPFSQGPLTQGYISMSQPSQMSQPGLSQPELSQDSYLGDEFKSQIDVALSQDSTYQGERAYQHGGVTGLSQY
SIO_010081: UPF1
subclass of: SO_0000673
so part of: UPF1
location: complement(join(341294..341413,341742..341959,342667..342828,343442..343523,344169..344343,345002..345144,346024..346180,347183..347300,348069..348282,349209..349352,349951..350065,350245..350409,350677..350795,350884..351043,351822..351930,352138..352236,352380..352464,353067..353228,353691..353871,354667..354834,355996..356085,356420..356562,362207..362431))
location: region:341294-362431:-1
so has part: feature:362207-362431:-1:exon
so has part: feature:356420-356562:-1:exon
so has part: feature:355996-356085:-1:exon
so has part: feature:354667-354834:-1:exon
so has part: feature:353691-353871:-1:exon
so has part: feature:353067-353228:-1:exon
so has part: feature:352380-352464:-1:exon
so has part: feature:352138-352236:-1:exon
so has part: feature:351822-351930:-1:exon
so has part: feature:350884-351043:-1:exon
so has part: feature:350677-350795:-1:exon
so has part: feature:350245-350409:-1:exon
so has part: feature:349951-350065:-1:exon
so has part: feature:349209-349352:-1:exon
so has part: feature:348069-348282:-1:exon
so has part: feature:347183-347300:-1:exon
so has part: feature:346024-346180:-1:exon
so has part: feature:345002-345144:-1:exon
so has part: feature:344169-344343:-1:exon
so has part: feature:343442-343523:-1:exon
so has part: feature:342667-342828:-1:exon
so has part: feature:341742-341959:-1:exon
so has part: feature:341294-341413:-1:exon

XP_030112990.1
type: Protein
SIO_000068: ncbiprotein

position:341294:-1
position: 341294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:362431:-1
position: 362431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:362207-362431:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:356420-356562:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:355996-356085:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:354667-354834:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:353691-353871:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:353067-353228:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:352380-352464:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:352138-352236:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:351822-351930:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:350884-351043:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:350677-350795:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:350245-350409:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:349951-350065:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:349209-349352:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:348069-348282:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:347183-347300:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:346024-346180:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:345002-345144:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:344169-344343:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:343442-343523:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:342667-342828:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:341742-341959:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:341294-341413:-1:exon

UPF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: UPF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: regulator of nonsense transcripts 1 isoform X1
translation: MSVEAYGPSSQTLTFLDTEEAELLGADTQGSEFEFTDFTLPSQTQTPPGPGQAGPAQGQGPPGAGQGAPGPLEAQVNGPDGILQNGAVDENVAKTSQLLAELNFEEDEEDTYYTKDLPVHACSYCGIHDPACVVYCNTSKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLGFIPAKADSVVVLLCRQPCASQSSLKDINWDSSQWQPLIQDRCFLSWLVKIPSEQEQLRARQITAQQINKLEELWKENPSATLEDLEKPGVDEEPQHVLLRYEDAYQYQNIFGPLVKLEADYDKKLKESQTQDNITVRWDLGLNKKRIAYFTLPKTDSDMRLMQGDEICLRYKGDLAPLWKGIGHVIKVPDSSTDYGDEIAIELRSSVGAPVEVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQKLQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLVEGPLNNLRESLMQFSKPRKLVNTINPGARFMTTAMYDAREAIIPGSVYDRSSQGRPSNMYFQTHDQIGMISAGPSHVTAMNIPIPFNLVMPPMPPPGYFGQANGPAAGRGAPKGKTGRGGRQKNRFGIPGTSQSNLPNSQASQDVVSQPFSQGPLTQGYISMSQPSQMSQPGLSQPELSQDSYLGDEFKSQIDVALSQDSTYQGERAYQHGGVTGLSQY
SIO_010081: UPF1
subclass of: SO_0000673
so part of: UPF1
location: complement(join(341294..341413,341742..341959,342667..342828,343442..343523,344169..344343,345002..345144,346024..346180,347183..347300,348069..348282,349209..349352,349951..350065,350245..350409,350677..350795,350884..351043,351822..351939,352138..352236,352380..352464,353067..353228,353691..353871,354667..354834,355996..356085,356420..356562,362207..362431))
location: region:341294-362431:-1
so has part: feature:362207-362431:-1:exon
so has part: feature:356420-356562:-1:exon
so has part: feature:355996-356085:-1:exon
so has part: feature:354667-354834:-1:exon
so has part: feature:353691-353871:-1:exon
so has part: feature:353067-353228:-1:exon
so has part: feature:352380-352464:-1:exon
so has part: feature:352138-352236:-1:exon
so has part: feature:351822-351939:-1:exon
so has part: feature:350884-351043:-1:exon
so has part: feature:350677-350795:-1:exon
so has part: feature:350245-350409:-1:exon
so has part: feature:349951-350065:-1:exon
so has part: feature:349209-349352:-1:exon
so has part: feature:348069-348282:-1:exon
so has part: feature:347183-347300:-1:exon
so has part: feature:346024-346180:-1:exon
so has part: feature:345002-345144:-1:exon
so has part: feature:344169-344343:-1:exon
so has part: feature:343442-343523:-1:exon
so has part: feature:342667-342828:-1:exon
so has part: feature:341742-341959:-1:exon
so has part: feature:341294-341413:-1:exon

XP_030112989.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:362207-362431:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:356420-356562:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:355996-356085:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:354667-354834:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:353691-353871:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:353067-353228:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:352380-352464:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:352138-352236:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:351822-351939:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:350884-351043:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:350677-350795:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:350245-350409:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:349951-350065:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:349209-349352:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:348069-348282:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:347183-347300:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:346024-346180:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:345002-345144:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:344169-344343:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:343442-343523:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:342667-342828:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:341742-341959:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:341294-341413:-1:exon

LOC100218446
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC100218446
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 362284..393919
location: region:362284-393919:1
so has part: feature:362284-393919:1:exon
subclass of: SO_0000010

100218446
type: Gene
SIO_000068: ncbigene

position:362284:1
position: 362284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:393919:1
position: 393919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:362284-393919:1:exon

LOC100218446
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC100218446
product: cartilage oligomeric matrix protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 37 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_041710909.1
SIO_010081: LOC100218446
subclass of: SO_0000673
so part of: LOC100218446
location: join(362284..362390,363974..364259,364735..364923,366090..366218,367398..367525,376220..376321,377561..377614,382415..382495,383351..383436,383682..383733,384642..384814,386414..386551,387470..387547,387943..388110,388872..388976,389104..389211,389662..389821,390249..390367,390599..390651,390947..391140,391843..392021,392181..392229,392425..392621,392727..392899,393071..393210,393350..393919)
location: region:362284-393919:1
so has part: feature:362284-362390:1:exon
so has part: feature:363974-364259:1:exon
so has part: feature:364735-364923:1:exon
so has part: feature:366090-366218:1:exon
so has part: feature:367398-367525:1:exon
so has part: feature:376220-376321:1:exon
so has part: feature:377561-377614:1:exon
so has part: feature:382415-382495:1:exon
so has part: feature:383351-383436:1:exon
so has part: feature:383682-383733:1:exon
so has part: feature:384642-384814:1:exon
so has part: feature:386414-386551:1:exon
so has part: feature:387470-387547:1:exon
so has part: feature:387943-388110:1:exon
so has part: feature:388872-388976:1:exon
so has part: feature:389104-389211:1:exon
so has part: feature:389662-389821:1:exon
so has part: feature:390249-390367:1:exon
so has part: feature:390599-390651:1:exon
so has part: feature:390947-391140:1:exon
so has part: feature:391843-392021:1:exon
so has part: feature:392181-392229:1:exon
so has part: feature:392425-392621:1:exon
so has part: feature:392727-392899:1:exon
so has part: feature:393071-393210:1:exon
so has part: feature:393350-393919:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:362284-362390:1:exon

position:362390:1
position: 362390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:363974-364259:1:exon

position:363974:1
position: 363974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:364259:1
position: 364259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:364735-364923:1:exon

position:364735:1
position: 364735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:364923:1
position: 364923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:366090-366218:1:exon

position:366090:1
position: 366090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:366218:1
position: 366218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:367398-367525:1:exon

position:367398:1
position: 367398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:367525:1
position: 367525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:376220-376321:1:exon

position:376220:1
position: 376220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:376321:1
position: 376321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:377561-377614:1:exon

position:377561:1
position: 377561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:377614:1
position: 377614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:382415-382495:1:exon

position:382415:1
position: 382415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:382495:1
position: 382495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:383351-383436:1:exon

position:383351:1
position: 383351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:383436:1
position: 383436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:383682-383733:1:exon

position:383682:1
position: 383682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:383733:1
position: 383733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:384642-384814:1:exon

position:384642:1
position: 384642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:384814:1
position: 384814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:386414-386551:1:exon

position:386414:1
position: 386414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:386551:1
position: 386551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:387470-387547:1:exon

position:387470:1
position: 387470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:387547:1
position: 387547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:387943-388110:1:exon

position:387943:1
position: 387943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:388110:1
position: 388110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:388872-388976:1:exon

position:388872:1
position: 388872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:388976:1
position: 388976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:389104-389211:1:exon

position:389104:1
position: 389104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:389211:1
position: 389211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:389662-389821:1:exon

position:389662:1
position: 389662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:389821:1
position: 389821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:390249-390367:1:exon

position:390249:1
position: 390249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:390367:1
position: 390367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:390599-390651:1:exon

position:390599:1
position: 390599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:390651:1
position: 390651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:390947-391140:1:exon

position:390947:1
position: 390947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:391140:1
position: 391140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:391843-392021:1:exon

position:391843:1
position: 391843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:392021:1
position: 392021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:392181-392229:1:exon

position:392181:1
position: 392181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:392229:1
position: 392229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:392425-392621:1:exon

position:392425:1
position: 392425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:392621:1
position: 392621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:392727-392899:1:exon

position:392727:1
position: 392727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:392899:1
position: 392899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:393071-393210:1:exon

position:393071:1
position: 393071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:393210:1
position: 393210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:393350-393919:1:exon

position:393350:1
position: 393350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100218446
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC100218446
product: cartilage oligomeric matrix protein, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 37 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041710912.1
SIO_010081: LOC100218446
subclass of: SO_0000673
so part of: LOC100218446
location: join(362284..362390,363974..364259,364735..364923,366090..366218,367398..367525,376220..376321,377561..377614,383351..383436,383682..383733,384642..384814,386414..386551,387470..387547,387943..388110,388872..388976,389104..389211,389662..389821,390249..390367,390599..390651,390947..391140,391843..392021,392181..392229,392425..392621,392727..392899,393071..393210,393350..393919)
location: region:362284-393919:1
so has part: feature:362284-362390:1:exon
so has part: feature:363974-364259:1:exon
so has part: feature:364735-364923:1:exon
so has part: feature:366090-366218:1:exon
so has part: feature:367398-367525:1:exon
so has part: feature:376220-376321:1:exon
so has part: feature:377561-377614:1:exon
so has part: feature:383351-383436:1:exon
so has part: feature:383682-383733:1:exon
so has part: feature:384642-384814:1:exon
so has part: feature:386414-386551:1:exon
so has part: feature:387470-387547:1:exon
so has part: feature:387943-388110:1:exon
so has part: feature:388872-388976:1:exon
so has part: feature:389104-389211:1:exon
so has part: feature:389662-389821:1:exon
so has part: feature:390249-390367:1:exon
so has part: feature:390599-390651:1:exon
so has part: feature:390947-391140:1:exon
so has part: feature:391843-392021:1:exon
so has part: feature:392181-392229:1:exon
so has part: feature:392425-392621:1:exon
so has part: feature:392727-392899:1:exon
so has part: feature:393071-393210:1:exon
so has part: feature:393350-393919:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:362284-362390:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:363974-364259:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:364735-364923:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:366090-366218:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:367398-367525:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:376220-376321:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:377561-377614:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:383351-383436:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:383682-383733:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:384642-384814:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:386414-386551:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:387470-387547:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:387943-388110:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:388872-388976:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:389104-389211:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:389662-389821:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:390249-390367:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:390599-390651:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:390947-391140:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:391843-392021:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:392181-392229:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:392425-392621:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:392727-392899:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:393071-393210:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:393350-393919:1:exon

LOC100218446
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC100218446
product: cartilage oligomeric matrix protein, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 37 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_041710913.1
SIO_010081: LOC100218446
subclass of: SO_0000673
so part of: LOC100218446
location: join(362284..362390,363974..364259,364735..364923,366090..366218,367398..367525,376220..376321,383351..383436,383682..383733,384642..384814,386414..386551,387470..387547,387943..388110,388872..388976,389104..389211,389662..389821,390249..390367,390599..390651,390947..391140,391843..392021,392181..392229,392425..392621,392727..392899,393071..393210,393350..393919)
location: region:362284-393919:1
so has part: feature:362284-362390:1:exon
so has part: feature:363974-364259:1:exon
so has part: feature:364735-364923:1:exon
so has part: feature:366090-366218:1:exon
so has part: feature:367398-367525:1:exon
so has part: feature:376220-376321:1:exon
so has part: feature:383351-383436:1:exon
so has part: feature:383682-383733:1:exon
so has part: feature:384642-384814:1:exon
so has part: feature:386414-386551:1:exon
so has part: feature:387470-387547:1:exon
so has part: feature:387943-388110:1:exon
so has part: feature:388872-388976:1:exon
so has part: feature:389104-389211:1:exon
so has part: feature:389662-389821:1:exon
so has part: feature:390249-390367:1:exon
so has part: feature:390599-390651:1:exon
so has part: feature:390947-391140:1:exon
so has part: feature:391843-392021:1:exon
so has part: feature:392181-392229:1:exon
so has part: feature:392425-392621:1:exon
so has part: feature:392727-392899:1:exon
so has part: feature:393071-393210:1:exon
so has part: feature:393350-393919:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:362284-362390:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:363974-364259:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:364735-364923:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:366090-366218:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:367398-367525:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:376220-376321:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:383351-383436:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:383682-383733:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:384642-384814:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:386414-386551:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:387470-387547:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:387943-388110:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:388872-388976:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:389104-389211:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:389662-389821:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:390249-390367:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:390599-390651:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:390947-391140:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:391843-392021:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:392181-392229:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:392425-392621:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:392727-392899:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:393071-393210:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:393350-393919:1:exon

LOC100218446
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC100218446
product: cartilage oligomeric matrix protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 37 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_041710910.1
SIO_010081: LOC100218446
subclass of: SO_0000673
so part of: LOC100218446
location: join(362284..362390,363974..364259,364735..364923,367398..367525,376220..376321,377561..377614,382415..382495,383351..383436,383682..383733,384642..384814,386414..386551,387470..387547,387943..388110,388872..388976,389104..389211,389662..389821,390249..390367,390599..390651,390947..391140,391843..392021,392181..392229,392425..392621,392727..392899,393071..393210,393350..393919)
location: region:362284-393919:1
so has part: feature:362284-362390:1:exon
so has part: feature:363974-364259:1:exon
so has part: feature:364735-364923:1:exon
so has part: feature:367398-367525:1:exon
so has part: feature:376220-376321:1:exon
so has part: feature:377561-377614:1:exon
so has part: feature:382415-382495:1:exon
so has part: feature:383351-383436:1:exon
so has part: feature:383682-383733:1:exon
so has part: feature:384642-384814:1:exon
so has part: feature:386414-386551:1:exon
so has part: feature:387470-387547:1:exon
so has part: feature:387943-388110:1:exon
so has part: feature:388872-388976:1:exon
so has part: feature:389104-389211:1:exon
so has part: feature:389662-389821:1:exon
so has part: feature:390249-390367:1:exon
so has part: feature:390599-390651:1:exon
so has part: feature:390947-391140:1:exon
so has part: feature:391843-392021:1:exon
so has part: feature:392181-392229:1:exon
so has part: feature:392425-392621:1:exon
so has part: feature:392727-392899:1:exon
so has part: feature:393071-393210:1:exon
so has part: feature:393350-393919:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:362284-362390:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:363974-364259:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:364735-364923:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:367398-367525:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:376220-376321:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:377561-377614:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:382415-382495:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:383351-383436:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:383682-383733:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:384642-384814:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:386414-386551:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:387470-387547:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:387943-388110:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:388872-388976:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:389104-389211:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:389662-389821:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:390249-390367:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:390599-390651:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:390947-391140:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:391843-392021:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:392181-392229:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:392425-392621:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:392727-392899:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:393071-393210:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:393350-393919:1:exon

LOC100218446
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC100218446
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cartilage oligomeric matrix protein isoform X1
translation: MTRLGHLAGEDRDWHLGTWMVLSTWSKKPKGNNLACQLCGFDPSRPLPGAAARPAAAFSRNPGNAAGAGGEVGPEMLQEMRETNRVLLEVRDLLKQQIKEITFLKNTVMECDACGMRPEVTGPVVTVTQFSRCVPNPCFPGVPCTESGGGFRCGPCPAGYTGNGTHCADVNECNANPCFPKVQCINTNPGFRCDPCPPGFTGQLLEGVGLAFARANKQVCTDINECETGAATNCVPNSICINTRGSYKCGACKPGFVGDQISGCRSQTAPGTRRCPNGEISPCHEKAECIVERDGSLSCQCLVGWAGNGYVCGKDTDIDGVPDEKQRCSDKKCRKDNCMTVPNSGQEDADRDGIGDACDDDADGDGIPNAEDNCVYTRNADQRNADKDNFGDACDNCRQVKNNDQRDIDGDGRGDECDEDMDGDGIKNPMDNCRRVPNPDQRDGDGDGVGDACDSCPTLSNPDQKDTDHDLVGDVCDTNQDSDGDGHQDSRDNCPTVPNSSQLDTDGDGLGDECDEDDDDDGVPDFRPPGPDNCRLVPNPTQEDSDGDGVGNLCEDDFDRDMVIDRIDVCPENAEVTLTDFRAFQTVVLDPEGDAQIDPNWIVLNQGMEIVQTMNSDPGLAVGYTAFNGVDFEGTFHVNTATDDDYAGFIFGYQDSSSFYVVMWKQMEQTYWQANPFRAVAEPGIQLKAVKSKTGPGEYLRNSLWHTGDTTDQVKLLWKDPRNSGWKDKTSYRWFLQHRPQVGYIRARFYEGPEVVADTGVVVDTTMRGGRLGVFCFSQENIIWSNLRYRCNDTIPEDYETFRFQQD
SIO_010081: LOC100218446
subclass of: SO_0000673
so part of: LOC100218446
location: join(376252..376321,377561..377614,382415..382495,383351..383436,383682..383733,384642..384814,386414..386551,387470..387547,387943..388110,388872..388976,389104..389211,389662..389821,390249..390367,390599..390651,390947..391140,391843..392021,392181..392229,392425..392621,392727..392899,393071..393210,393350..393396)
location: region:376252-393396:1
so has part: feature:376252-376321:1:exon
so has part: feature:377561-377614:1:exon
so has part: feature:382415-382495:1:exon
so has part: feature:383351-383436:1:exon
so has part: feature:383682-383733:1:exon
so has part: feature:384642-384814:1:exon
so has part: feature:386414-386551:1:exon
so has part: feature:387470-387547:1:exon
so has part: feature:387943-388110:1:exon
so has part: feature:388872-388976:1:exon
so has part: feature:389104-389211:1:exon
so has part: feature:389662-389821:1:exon
so has part: feature:390249-390367:1:exon
so has part: feature:390599-390651:1:exon
so has part: feature:390947-391140:1:exon
so has part: feature:391843-392021:1:exon
so has part: feature:392181-392229:1:exon
so has part: feature:392425-392621:1:exon
so has part: feature:392727-392899:1:exon
so has part: feature:393071-393210:1:exon
so has part: feature:393350-393396:1:exon

XP_041566843.1
type: Protein
SIO_000068: ncbiprotein

position:376252:1
position: 376252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:393396:1
position: 393396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:376252-376321:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:377561-377614:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:382415-382495:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:383351-383436:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:383682-383733:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:384642-384814:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:386414-386551:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:387470-387547:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:387943-388110:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:388872-388976:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:389104-389211:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:389662-389821:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:390249-390367:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:390599-390651:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:390947-391140:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:391843-392021:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:392181-392229:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:392425-392621:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:392727-392899:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:393071-393210:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:393350-393396:1:exon

LOC100218446
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC100218446
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cartilage oligomeric matrix protein isoform X1
translation: MTRLGHLAGEDRDWHLGTWMVLSTWSKKPKGNNLACQLCGFDPSRPLPGAAARPAAAFSRNPGNAAGAGGEVGPEMLQEMRETNRVLLEVRDLLKQQIKEITFLKNTVMECDACGMRPEVTGPVVTVTQFSRCVPNPCFPGVPCTESGGGFRCGPCPAGYTGNGTHCADVNECNANPCFPKVQCINTNPGFRCDPCPPGFTGQLLEGVGLAFARANKQVCTDINECETGAATNCVPNSICINTRGSYKCGACKPGFVGDQISGCRSQTAPGTRRCPNGEISPCHEKAECIVERDGSLSCQCLVGWAGNGYVCGKDTDIDGVPDEKQRCSDKKCRKDNCMTVPNSGQEDADRDGIGDACDDDADGDGIPNAEDNCVYTRNADQRNADKDNFGDACDNCRQVKNNDQRDIDGDGRGDECDEDMDGDGIKNPMDNCRRVPNPDQRDGDGDGVGDACDSCPTLSNPDQKDTDHDLVGDVCDTNQDSDGDGHQDSRDNCPTVPNSSQLDTDGDGLGDECDEDDDDDGVPDFRPPGPDNCRLVPNPTQEDSDGDGVGNLCEDDFDRDMVIDRIDVCPENAEVTLTDFRAFQTVVLDPEGDAQIDPNWIVLNQGMEIVQTMNSDPGLAVGYTAFNGVDFEGTFHVNTATDDDYAGFIFGYQDSSSFYVVMWKQMEQTYWQANPFRAVAEPGIQLKAVKSKTGPGEYLRNSLWHTGDTTDQVKLLWKDPRNSGWKDKTSYRWFLQHRPQVGYIRARFYEGPEVVADTGVVVDTTMRGGRLGVFCFSQENIIWSNLRYRCNDTIPEDYETFRFQQD
SIO_010081: LOC100218446
subclass of: SO_0000673
so part of: LOC100218446
location: join(376252..376321,377561..377614,382415..382495,383351..383436,383682..383733,384642..384814,386414..386551,387470..387547,387943..388110,388872..388976,389104..389211,389662..389821,390249..390367,390599..390651,390947..391140,391843..392021,392181..392229,392425..392621,392727..392899,393071..393210,393350..393396)
location: region:376252-393396:1
so has part: feature:376252-376321:1:exon
so has part: feature:377561-377614:1:exon
so has part: feature:382415-382495:1:exon
so has part: feature:383351-383436:1:exon
so has part: feature:383682-383733:1:exon
so has part: feature:384642-384814:1:exon
so has part: feature:386414-386551:1:exon
so has part: feature:387470-387547:1:exon
so has part: feature:387943-388110:1:exon
so has part: feature:388872-388976:1:exon
so has part: feature:389104-389211:1:exon
so has part: feature:389662-389821:1:exon
so has part: feature:390249-390367:1:exon
so has part: feature:390599-390651:1:exon
so has part: feature:390947-391140:1:exon
so has part: feature:391843-392021:1:exon
so has part: feature:392181-392229:1:exon
so has part: feature:392425-392621:1:exon
so has part: feature:392727-392899:1:exon
so has part: feature:393071-393210:1:exon
so has part: feature:393350-393396:1:exon

XP_041566844.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:376252-376321:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:377561-377614:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:382415-382495:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:383351-383436:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:383682-383733:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:384642-384814:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:386414-386551:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:387470-387547:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:387943-388110:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:388872-388976:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:389104-389211:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:389662-389821:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:390249-390367:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:390599-390651:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:390947-391140:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:391843-392021:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:392181-392229:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:392425-392621:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:392727-392899:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:393071-393210:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:393350-393396:1:exon

LOC100218446
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC100218446
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cartilage oligomeric matrix protein isoform X3
translation: MTRLGHLAGEDRDWHLGTWMVLSTWSKKPKGNNLACQLCGFGGEVGPEMLQEMRETNRVLLEVRDLLKQQIKEITFLKNTVMECDACGMRPEVTGPVVTVTQFSRCVPNPCFPGVPCTESGGGFRCGPCPAGYTGNGTHCADVNECNANPCFPKVQCINTNPGFRCDPCPPGFTGQLLEGVGLAFARANKQVCTDINECETGAATNCVPNSICINTRGSYKCGACKPGFVGDQISGCRSQTAPGTRRCPNGEISPCHEKAECIVERDGSLSCQCLVGWAGNGYVCGKDTDIDGVPDEKQRCSDKKCRKDNCMTVPNSGQEDADRDGIGDACDDDADGDGIPNAEDNCVYTRNADQRNADKDNFGDACDNCRQVKNNDQRDIDGDGRGDECDEDMDGDGIKNPMDNCRRVPNPDQRDGDGDGVGDACDSCPTLSNPDQKDTDHDLVGDVCDTNQDSDGDGHQDSRDNCPTVPNSSQLDTDGDGLGDECDEDDDDDGVPDFRPPGPDNCRLVPNPTQEDSDGDGVGNLCEDDFDRDMVIDRIDVCPENAEVTLTDFRAFQTVVLDPEGDAQIDPNWIVLNQGMEIVQTMNSDPGLAVGYTAFNGVDFEGTFHVNTATDDDYAGFIFGYQDSSSFYVVMWKQMEQTYWQANPFRAVAEPGIQLKAVKSKTGPGEYLRNSLWHTGDTTDQVKLLWKDPRNSGWKDKTSYRWFLQHRPQVGYIRARFYEGPEVVADTGVVVDTTMRGGRLGVFCFSQENIIWSNLRYRCNDTIPEDYETFRFQQD
SIO_010081: LOC100218446
subclass of: SO_0000673
so part of: LOC100218446
location: join(376252..376321,377561..377614,383351..383436,383682..383733,384642..384814,386414..386551,387470..387547,387943..388110,388872..388976,389104..389211,389662..389821,390249..390367,390599..390651,390947..391140,391843..392021,392181..392229,392425..392621,392727..392899,393071..393210,393350..393396)
location: region:376252-393396:1
so has part: feature:376252-376321:1:exon
so has part: feature:377561-377614:1:exon
so has part: feature:383351-383436:1:exon
so has part: feature:383682-383733:1:exon
so has part: feature:384642-384814:1:exon
so has part: feature:386414-386551:1:exon
so has part: feature:387470-387547:1:exon
so has part: feature:387943-388110:1:exon
so has part: feature:388872-388976:1:exon
so has part: feature:389104-389211:1:exon
so has part: feature:389662-389821:1:exon
so has part: feature:390249-390367:1:exon
so has part: feature:390599-390651:1:exon
so has part: feature:390947-391140:1:exon
so has part: feature:391843-392021:1:exon
so has part: feature:392181-392229:1:exon
so has part: feature:392425-392621:1:exon
so has part: feature:392727-392899:1:exon
so has part: feature:393071-393210:1:exon
so has part: feature:393350-393396:1:exon

XP_041566846.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:376252-376321:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:377561-377614:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:383351-383436:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:383682-383733:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:384642-384814:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:386414-386551:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:387470-387547:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:387943-388110:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:388872-388976:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:389104-389211:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:389662-389821:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:390249-390367:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:390599-390651:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:390947-391140:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:391843-392021:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:392181-392229:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:392425-392621:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:392727-392899:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:393071-393210:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:393350-393396:1:exon

LOC100218446
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC100218446
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cartilage oligomeric matrix protein isoform X5
translation: MTRLGHLAGEDRDWHLGTWMVLSRGEVGPEMLQEMRETNRVLLEVRDLLKQQIKEITFLKNTVMECDACGMRPEVTGPVVTVTQFSRCVPNPCFPGVPCTESGGGFRCGPCPAGYTGNGTHCADVNECNANPCFPKVQCINTNPGFRCDPCPPGFTGQLLEGVGLAFARANKQVCTDINECETGAATNCVPNSICINTRGSYKCGACKPGFVGDQISGCRSQTAPGTRRCPNGEISPCHEKAECIVERDGSLSCQCLVGWAGNGYVCGKDTDIDGVPDEKQRCSDKKCRKDNCMTVPNSGQEDADRDGIGDACDDDADGDGIPNAEDNCVYTRNADQRNADKDNFGDACDNCRQVKNNDQRDIDGDGRGDECDEDMDGDGIKNPMDNCRRVPNPDQRDGDGDGVGDACDSCPTLSNPDQKDTDHDLVGDVCDTNQDSDGDGHQDSRDNCPTVPNSSQLDTDGDGLGDECDEDDDDDGVPDFRPPGPDNCRLVPNPTQEDSDGDGVGNLCEDDFDRDMVIDRIDVCPENAEVTLTDFRAFQTVVLDPEGDAQIDPNWIVLNQGMEIVQTMNSDPGLAVGYTAFNGVDFEGTFHVNTATDDDYAGFIFGYQDSSSFYVVMWKQMEQTYWQANPFRAVAEPGIQLKAVKSKTGPGEYLRNSLWHTGDTTDQVKLLWKDPRNSGWKDKTSYRWFLQHRPQVGYIRARFYEGPEVVADTGVVVDTTMRGGRLGVFCFSQENIIWSNLRYRCNDTIPEDYETFRFQQD
SIO_010081: LOC100218446
subclass of: SO_0000673
so part of: LOC100218446
location: join(376252..376321,383351..383436,383682..383733,384642..384814,386414..386551,387470..387547,387943..388110,388872..388976,389104..389211,389662..389821,390249..390367,390599..390651,390947..391140,391843..392021,392181..392229,392425..392621,392727..392899,393071..393210,393350..393396)
location: region:376252-393396:1
so has part: feature:376252-376321:1:exon
so has part: feature:383351-383436:1:exon
so has part: feature:383682-383733:1:exon
so has part: feature:384642-384814:1:exon
so has part: feature:386414-386551:1:exon
so has part: feature:387470-387547:1:exon
so has part: feature:387943-388110:1:exon
so has part: feature:388872-388976:1:exon
so has part: feature:389104-389211:1:exon
so has part: feature:389662-389821:1:exon
so has part: feature:390249-390367:1:exon
so has part: feature:390599-390651:1:exon
so has part: feature:390947-391140:1:exon
so has part: feature:391843-392021:1:exon
so has part: feature:392181-392229:1:exon
so has part: feature:392425-392621:1:exon
so has part: feature:392727-392899:1:exon
so has part: feature:393071-393210:1:exon
so has part: feature:393350-393396:1:exon

XP_041566847.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:376252-376321:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:383351-383436:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:383682-383733:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:384642-384814:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:386414-386551:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:387470-387547:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:387943-388110:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:388872-388976:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:389104-389211:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:389662-389821:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:390249-390367:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:390599-390651:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:390947-391140:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:391843-392021:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:392181-392229:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:392425-392621:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:392727-392899:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:393071-393210:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:393350-393396:1:exon

LOC100218446
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC100218446
product: cartilage oligomeric matrix protein, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 38 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_041710911.1
SIO_010081: LOC100218446
subclass of: SO_0000673
so part of: LOC100218446
location: join(380542..380683,382415..382495,383351..383436,383682..383733,384642..384814,386414..386551,387470..387547,387943..388110,388872..388976,389104..389211,389662..389821,390249..390367,390599..390651,390947..391140,391843..392021,392181..392229,392425..392621,392727..392899,393071..393210,393350..393919)
location: region:380542-393919:1
so has part: feature:380542-380683:1:exon
so has part: feature:382415-382495:1:exon
so has part: feature:383351-383436:1:exon
so has part: feature:383682-383733:1:exon
so has part: feature:384642-384814:1:exon
so has part: feature:386414-386551:1:exon
so has part: feature:387470-387547:1:exon
so has part: feature:387943-388110:1:exon
so has part: feature:388872-388976:1:exon
so has part: feature:389104-389211:1:exon
so has part: feature:389662-389821:1:exon
so has part: feature:390249-390367:1:exon
so has part: feature:390599-390651:1:exon
so has part: feature:390947-391140:1:exon
so has part: feature:391843-392021:1:exon
so has part: feature:392181-392229:1:exon
so has part: feature:392425-392621:1:exon
so has part: feature:392727-392899:1:exon
so has part: feature:393071-393210:1:exon
so has part: feature:393350-393919:1:exon

position:380542:1
position: 380542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:380542-380683:1:exon

position:380683:1
position: 380683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:382415-382495:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:383351-383436:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:383682-383733:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:384642-384814:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:386414-386551:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:387470-387547:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:387943-388110:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:388872-388976:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:389104-389211:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:389662-389821:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:390249-390367:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:390599-390651:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:390947-391140:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:391843-392021:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:392181-392229:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:392425-392621:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:392727-392899:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:393071-393210:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:393350-393919:1:exon

LOC100218446
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC100218446
product: cartilage oligomeric matrix protein, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 4 long SRA reads, 38 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_030257138.3
SIO_010081: LOC100218446
subclass of: SO_0000673
so part of: LOC100218446
location: join(380542..380683,383351..383436,383682..383733,384642..384814,386414..386551,387470..387547,387943..388110,388872..388976,389104..389211,389662..389821,390249..390367,390599..390651,390947..391140,391843..392021,392181..392229,392425..392621,392727..392899,393071..393210,393350..393919)
location: region:380542-393919:1
so has part: feature:380542-380683:1:exon
so has part: feature:383351-383436:1:exon
so has part: feature:383682-383733:1:exon
so has part: feature:384642-384814:1:exon
so has part: feature:386414-386551:1:exon
so has part: feature:387470-387547:1:exon
so has part: feature:387943-388110:1:exon
so has part: feature:388872-388976:1:exon
so has part: feature:389104-389211:1:exon
so has part: feature:389662-389821:1:exon
so has part: feature:390249-390367:1:exon
so has part: feature:390599-390651:1:exon
so has part: feature:390947-391140:1:exon
so has part: feature:391843-392021:1:exon
so has part: feature:392181-392229:1:exon
so has part: feature:392425-392621:1:exon
so has part: feature:392727-392899:1:exon
so has part: feature:393071-393210:1:exon
so has part: feature:393350-393919:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:380542-380683:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:383351-383436:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:383682-383733:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:384642-384814:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:386414-386551:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:387470-387547:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:387943-388110:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:388872-388976:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:389104-389211:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:389662-389821:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:390249-390367:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:390599-390651:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:390947-391140:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:391843-392021:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:392181-392229:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:392425-392621:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:392727-392899:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:393071-393210:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:393350-393919:1:exon

LOC100218446
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC100218446
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cartilage oligomeric matrix protein isoform X2
translation: MAAAPLPLLLLLLLCAPLGWGQQRRIDPSRPLPGAAARPAAAFSRNPGNAAGAGGEVGPEMLQEMRETNRVLLEVRDLLKQQIKEITFLKNTVMECDACGMRPEVTGPVVTVTQFSRCVPNPCFPGVPCTESGGGFRCGPCPAGYTGNGTHCADVNECNANPCFPKVQCINTNPGFRCDPCPPGFTGQLLEGVGLAFARANKQVCTDINECETGAATNCVPNSICINTRGSYKCGACKPGFVGDQISGCRSQTAPGTRRCPNGEISPCHEKAECIVERDGSLSCQCLVGWAGNGYVCGKDTDIDGVPDEKQRCSDKKCRKDNCMTVPNSGQEDADRDGIGDACDDDADGDGIPNAEDNCVYTRNADQRNADKDNFGDACDNCRQVKNNDQRDIDGDGRGDECDEDMDGDGIKNPMDNCRRVPNPDQRDGDGDGVGDACDSCPTLSNPDQKDTDHDLVGDVCDTNQDSDGDGHQDSRDNCPTVPNSSQLDTDGDGLGDECDEDDDDDGVPDFRPPGPDNCRLVPNPTQEDSDGDGVGNLCEDDFDRDMVIDRIDVCPENAEVTLTDFRAFQTVVLDPEGDAQIDPNWIVLNQGMEIVQTMNSDPGLAVGYTAFNGVDFEGTFHVNTATDDDYAGFIFGYQDSSSFYVVMWKQMEQTYWQANPFRAVAEPGIQLKAVKSKTGPGEYLRNSLWHTGDTTDQVKLLWKDPRNSGWKDKTSYRWFLQHRPQVGYIRARFYEGPEVVADTGVVVDTTMRGGRLGVFCFSQENIIWSNLRYRCNDTIPEDYETFRFQQD
SIO_010081: LOC100218446
subclass of: SO_0000673
so part of: LOC100218446
location: join(380605..380683,382415..382495,383351..383436,383682..383733,384642..384814,386414..386551,387470..387547,387943..388110,388872..388976,389104..389211,389662..389821,390249..390367,390599..390651,390947..391140,391843..392021,392181..392229,392425..392621,392727..392899,393071..393210,393350..393396)
location: region:380605-393396:1
so has part: feature:380605-380683:1:exon
so has part: feature:382415-382495:1:exon
so has part: feature:383351-383436:1:exon
so has part: feature:383682-383733:1:exon
so has part: feature:384642-384814:1:exon
so has part: feature:386414-386551:1:exon
so has part: feature:387470-387547:1:exon
so has part: feature:387943-388110:1:exon
so has part: feature:388872-388976:1:exon
so has part: feature:389104-389211:1:exon
so has part: feature:389662-389821:1:exon
so has part: feature:390249-390367:1:exon
so has part: feature:390599-390651:1:exon
so has part: feature:390947-391140:1:exon
so has part: feature:391843-392021:1:exon
so has part: feature:392181-392229:1:exon
so has part: feature:392425-392621:1:exon
so has part: feature:392727-392899:1:exon
so has part: feature:393071-393210:1:exon
so has part: feature:393350-393396:1:exon

XP_041566845.1
type: Protein
SIO_000068: ncbiprotein

position:380605:1
position: 380605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:380605-380683:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:382415-382495:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:383351-383436:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:383682-383733:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:384642-384814:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:386414-386551:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:387470-387547:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:387943-388110:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:388872-388976:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:389104-389211:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:389662-389821:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:390249-390367:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:390599-390651:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:390947-391140:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:391843-392021:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:392181-392229:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:392425-392621:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:392727-392899:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:393071-393210:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:393350-393396:1:exon

LOC100218446
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC100218446
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cartilage oligomeric matrix protein isoform X4
translation: MAAAPLPLLLLLLLCAPLGWGQQRRIGGEVGPEMLQEMRETNRVLLEVRDLLKQQIKEITFLKNTVMECDACGMRPEVTGPVVTVTQFSRCVPNPCFPGVPCTESGGGFRCGPCPAGYTGNGTHCADVNECNANPCFPKVQCINTNPGFRCDPCPPGFTGQLLEGVGLAFARANKQVCTDINECETGAATNCVPNSICINTRGSYKCGACKPGFVGDQISGCRSQTAPGTRRCPNGEISPCHEKAECIVERDGSLSCQCLVGWAGNGYVCGKDTDIDGVPDEKQRCSDKKCRKDNCMTVPNSGQEDADRDGIGDACDDDADGDGIPNAEDNCVYTRNADQRNADKDNFGDACDNCRQVKNNDQRDIDGDGRGDECDEDMDGDGIKNPMDNCRRVPNPDQRDGDGDGVGDACDSCPTLSNPDQKDTDHDLVGDVCDTNQDSDGDGHQDSRDNCPTVPNSSQLDTDGDGLGDECDEDDDDDGVPDFRPPGPDNCRLVPNPTQEDSDGDGVGNLCEDDFDRDMVIDRIDVCPENAEVTLTDFRAFQTVVLDPEGDAQIDPNWIVLNQGMEIVQTMNSDPGLAVGYTAFNGVDFEGTFHVNTATDDDYAGFIFGYQDSSSFYVVMWKQMEQTYWQANPFRAVAEPGIQLKAVKSKTGPGEYLRNSLWHTGDTTDQVKLLWKDPRNSGWKDKTSYRWFLQHRPQVGYIRARFYEGPEVVADTGVVVDTTMRGGRLGVFCFSQENIIWSNLRYRCNDTIPEDYETFRFQQD
SIO_010081: LOC100218446
subclass of: SO_0000673
so part of: LOC100218446
location: join(380605..380683,383351..383436,383682..383733,384642..384814,386414..386551,387470..387547,387943..388110,388872..388976,389104..389211,389662..389821,390249..390367,390599..390651,390947..391140,391843..392021,392181..392229,392425..392621,392727..392899,393071..393210,393350..393396)
location: region:380605-393396:1
so has part: feature:380605-380683:1:exon
so has part: feature:383351-383436:1:exon
so has part: feature:383682-383733:1:exon
so has part: feature:384642-384814:1:exon
so has part: feature:386414-386551:1:exon
so has part: feature:387470-387547:1:exon
so has part: feature:387943-388110:1:exon
so has part: feature:388872-388976:1:exon
so has part: feature:389104-389211:1:exon
so has part: feature:389662-389821:1:exon
so has part: feature:390249-390367:1:exon
so has part: feature:390599-390651:1:exon
so has part: feature:390947-391140:1:exon
so has part: feature:391843-392021:1:exon
so has part: feature:392181-392229:1:exon
so has part: feature:392425-392621:1:exon
so has part: feature:392727-392899:1:exon
so has part: feature:393071-393210:1:exon
so has part: feature:393350-393396:1:exon

XP_030112998.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:380605-380683:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:383351-383436:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:383682-383733:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:384642-384814:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:386414-386551:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:387470-387547:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:387943-388110:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:388872-388976:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:389104-389211:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:389662-389821:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:390249-390367:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:390599-390651:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:390947-391140:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:391843-392021:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:392181-392229:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:392425-392621:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:392727-392899:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:393071-393210:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:393350-393396:1:exon

CRTC1
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: CRTC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(395443..440472)
location: region:395443-440472:-1
so has part: feature:395443-440472:-1:exon
subclass of: SO_0000010

100227217
type: Gene
SIO_000068: ncbigene

position:395443:-1
position: 395443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:440472:-1
position: 440472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:395443-440472:-1:exon

CRTC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: CRTC1
product: CREB regulated transcription coactivator 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 3 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
transcript id: XM_030257145.3
SIO_010081: CRTC1
subclass of: SO_0000673
so part of: CRTC1
location: complement(join(395443..400322,401073..401253,403344..403430,409894..410145,410934..411070,413485..413708,414810..414853,415243..415328,416616..416710,417476..417537,418976..419113,421778..421825,423148..423264,440288..440472))
location: region:395443-440472:-1
so has part: feature:440288-440472:-1:exon
so has part: feature:423148-423264:-1:exon
so has part: feature:421778-421825:-1:exon
so has part: feature:418976-419113:-1:exon
so has part: feature:417476-417537:-1:exon
so has part: feature:416616-416710:-1:exon
so has part: feature:415243-415328:-1:exon
so has part: feature:414810-414853:-1:exon
so has part: feature:413485-413708:-1:exon
so has part: feature:410934-411070:-1:exon
so has part: feature:409894-410145:-1:exon
so has part: feature:403344-403430:-1:exon
so has part: feature:401073-401253:-1:exon
so has part: feature:395443-400322:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:440288-440472:-1:exon

position:440288:-1
position: 440288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:423148-423264:-1:exon

position:423148:-1
position: 423148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:423264:-1
position: 423264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:421778-421825:-1:exon

position:421778:-1
position: 421778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:421825:-1
position: 421825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:418976-419113:-1:exon

position:418976:-1
position: 418976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:419113:-1
position: 419113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:417476-417537:-1:exon

position:417476:-1
position: 417476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:417537:-1
position: 417537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:416616-416710:-1:exon

position:416616:-1
position: 416616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:416710:-1
position: 416710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:415243-415328:-1:exon

position:415243:-1
position: 415243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:415328:-1
position: 415328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:414810-414853:-1:exon

position:414810:-1
position: 414810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:414853:-1
position: 414853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:413485-413708:-1:exon

position:413485:-1
position: 413485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:413708:-1
position: 413708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:410934-411070:-1:exon

position:410934:-1
position: 410934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:411070:-1
position: 411070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:409894-410145:-1:exon

position:409894:-1
position: 409894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:410145:-1
position: 410145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:403344-403430:-1:exon

position:403344:-1
position: 403344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:403430:-1
position: 403430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:401073-401253:-1:exon

position:401073:-1
position: 401073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:401253:-1
position: 401253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:395443-400322:-1:exon

position:400322:-1
position: 400322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CRTC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: CRTC1
product: CREB regulated transcription coactivator 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 3 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 49 samples with support for all annotated introns
transcript id: XM_030257144.3
SIO_010081: CRTC1
subclass of: SO_0000673
so part of: CRTC1
location: complement(join(395443..400322,401073..401253,407374..407475,409894..410145,410934..411070,413485..413708,414810..414853,415243..415328,416616..416710,417476..417537,418976..419113,421778..421825,423148..423264,440288..440472))
location: region:395443-440472:-1
so has part: feature:440288-440472:-1:exon
so has part: feature:423148-423264:-1:exon
so has part: feature:421778-421825:-1:exon
so has part: feature:418976-419113:-1:exon
so has part: feature:417476-417537:-1:exon
so has part: feature:416616-416710:-1:exon
so has part: feature:415243-415328:-1:exon
so has part: feature:414810-414853:-1:exon
so has part: feature:413485-413708:-1:exon
so has part: feature:410934-411070:-1:exon
so has part: feature:409894-410145:-1:exon
so has part: feature:407374-407475:-1:exon
so has part: feature:401073-401253:-1:exon
so has part: feature:395443-400322:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:440288-440472:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:423148-423264:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:421778-421825:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:418976-419113:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:417476-417537:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:416616-416710:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:415243-415328:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:414810-414853:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:413485-413708:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:410934-411070:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:409894-410145:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:407374-407475:-1:exon

position:407374:-1
position: 407374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:407475:-1
position: 407475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:401073-401253:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:395443-400322:-1:exon

CRTC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: CRTC1
product: CREB regulated transcription coactivator 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 3 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 55 samples with support for all annotated introns
transcript id: XM_030257140.3
SIO_010081: CRTC1
subclass of: SO_0000673
so part of: CRTC1
location: complement(join(395443..400322,401073..401253,403344..403430,407374..407475,409894..410145,410934..411070,413485..413708,414810..414853,415243..415328,416616..416710,417476..417537,418976..419113,421778..421825,423148..423264,440288..440472))
location: region:395443-440472:-1
so has part: feature:440288-440472:-1:exon
so has part: feature:423148-423264:-1:exon
so has part: feature:421778-421825:-1:exon
so has part: feature:418976-419113:-1:exon
so has part: feature:417476-417537:-1:exon
so has part: feature:416616-416710:-1:exon
so has part: feature:415243-415328:-1:exon
so has part: feature:414810-414853:-1:exon
so has part: feature:413485-413708:-1:exon
so has part: feature:410934-411070:-1:exon
so has part: feature:409894-410145:-1:exon
so has part: feature:407374-407475:-1:exon
so has part: feature:403344-403430:-1:exon
so has part: feature:401073-401253:-1:exon
so has part: feature:395443-400322:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:440288-440472:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:423148-423264:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:421778-421825:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:418976-419113:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:417476-417537:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:416616-416710:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:415243-415328:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:414810-414853:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:413485-413708:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:410934-411070:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:409894-410145:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:407374-407475:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:403344-403430:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:401073-401253:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:395443-400322:-1:exon

CRTC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: CRTC1
product: CREB regulated transcription coactivator 1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs, 3 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 58 samples with support for all annotated introns
transcript id: XM_030257146.3
SIO_010081: CRTC1
subclass of: SO_0000673
so part of: CRTC1
location: complement(join(395443..400322,401073..401253,407374..407475,409894..410145,410934..411067,413485..413708,414810..414853,415243..415328,416616..416710,417476..417537,418976..419113,423148..423264,440288..440471))
location: region:395443-440471:-1
so has part: feature:440288-440471:-1:exon
so has part: feature:423148-423264:-1:exon
so has part: feature:418976-419113:-1:exon
so has part: feature:417476-417537:-1:exon
so has part: feature:416616-416710:-1:exon
so has part: feature:415243-415328:-1:exon
so has part: feature:414810-414853:-1:exon
so has part: feature:413485-413708:-1:exon
so has part: feature:410934-411067:-1:exon
so has part: feature:409894-410145:-1:exon
so has part: feature:407374-407475:-1:exon
so has part: feature:401073-401253:-1:exon
so has part: feature:395443-400322:-1:exon

position:440471:-1
position: 440471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:440288-440471:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:423148-423264:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:418976-419113:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:417476-417537:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:416616-416710:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:415243-415328:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:414810-414853:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:413485-413708:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:410934-411067:-1:exon

position:411067:-1
position: 411067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:409894-410145:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:407374-407475:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:401073-401253:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:395443-400322:-1:exon

CRTC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: CRTC1
product: CREB regulated transcription coactivator 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 8 ESTs, 6 long SRA reads, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 75 samples with support for all annotated introns
transcript id: XM_030257143.3
SIO_010081: CRTC1
subclass of: SO_0000673
so part of: CRTC1
location: complement(join(395443..400322,401073..401253,403344..403430,407374..407475,409894..410145,410934..411067,413485..413708,414810..414853,415243..415328,416616..416710,417476..417537,418976..419113,423148..423264,440288..440471))
location: region:395443-440471:-1
so has part: feature:440288-440471:-1:exon
so has part: feature:423148-423264:-1:exon
so has part: feature:418976-419113:-1:exon
so has part: feature:417476-417537:-1:exon
so has part: feature:416616-416710:-1:exon
so has part: feature:415243-415328:-1:exon
so has part: feature:414810-414853:-1:exon
so has part: feature:413485-413708:-1:exon
so has part: feature:410934-411067:-1:exon
so has part: feature:409894-410145:-1:exon
so has part: feature:407374-407475:-1:exon
so has part: feature:403344-403430:-1:exon
so has part: feature:401073-401253:-1:exon
so has part: feature:395443-400322:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:440288-440471:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:423148-423264:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:418976-419113:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:417476-417537:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:416616-416710:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:415243-415328:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:414810-414853:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:413485-413708:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:410934-411067:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:409894-410145:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:407374-407475:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:403344-403430:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:401073-401253:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:395443-400322:-1:exon

CRTC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: CRTC1
product: CREB regulated transcription coactivator 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 8 ESTs, 3 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 77 samples with support for all annotated introns
transcript id: XM_030257142.3
SIO_010081: CRTC1
subclass of: SO_0000673
so part of: CRTC1
location: complement(join(395443..400322,401073..401253,403344..403430,407374..407475,409894..410145,410934..411070,413485..413708,414810..414853,415243..415328,416616..416710,417476..417537,418976..419113,423148..423264,440288..440471))
location: region:395443-440471:-1
so has part: feature:440288-440471:-1:exon
so has part: feature:423148-423264:-1:exon
so has part: feature:418976-419113:-1:exon
so has part: feature:417476-417537:-1:exon
so has part: feature:416616-416710:-1:exon
so has part: feature:415243-415328:-1:exon
so has part: feature:414810-414853:-1:exon
so has part: feature:413485-413708:-1:exon
so has part: feature:410934-411070:-1:exon
so has part: feature:409894-410145:-1:exon
so has part: feature:407374-407475:-1:exon
so has part: feature:403344-403430:-1:exon
so has part: feature:401073-401253:-1:exon
so has part: feature:395443-400322:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:440288-440471:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:423148-423264:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:418976-419113:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:417476-417537:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:416616-416710:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:415243-415328:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:414810-414853:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:413485-413708:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:410934-411070:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:409894-410145:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:407374-407475:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:403344-403430:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:401073-401253:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:395443-400322:-1:exon

CRTC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: CRTC1
product: CREB regulated transcription coactivator 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 3 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 54 samples with support for all annotated introns
transcript id: XM_030257141.3
SIO_010081: CRTC1
subclass of: SO_0000673
so part of: CRTC1
location: complement(join(395443..400322,401073..401253,403344..403430,407374..407475,409894..410145,410934..411067,413485..413708,414810..414853,415243..415328,416616..416710,417476..417537,418976..419113,421778..421825,423148..423264,440288..440471))
location: region:395443-440471:-1
so has part: feature:440288-440471:-1:exon
so has part: feature:423148-423264:-1:exon
so has part: feature:421778-421825:-1:exon
so has part: feature:418976-419113:-1:exon
so has part: feature:417476-417537:-1:exon
so has part: feature:416616-416710:-1:exon
so has part: feature:415243-415328:-1:exon
so has part: feature:414810-414853:-1:exon
so has part: feature:413485-413708:-1:exon
so has part: feature:410934-411067:-1:exon
so has part: feature:409894-410145:-1:exon
so has part: feature:407374-407475:-1:exon
so has part: feature:403344-403430:-1:exon
so has part: feature:401073-401253:-1:exon
so has part: feature:395443-400322:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:440288-440471:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:423148-423264:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:421778-421825:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:418976-419113:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:417476-417537:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:416616-416710:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:415243-415328:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:414810-414853:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:413485-413708:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:410934-411067:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:409894-410145:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:407374-407475:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:403344-403430:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:401073-401253:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:395443-400322:-1:exon

CRTC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: CRTC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CREB-regulated transcription coactivator 1 isoform X7
translation: MRAAPPRPRGGGCGRGKMAASNNPRKFSEKIALHNQKQAEETAAFEEVMKDLSLTRAHRLQLQKTQYLQLGQSRGQYYGGSLPNVNQIGNSAMDLPFQTPFQSSALDTSRTTRHHGLVDRVYRERNRLGSPHRRPLSVDKHGRQVDSCPYGTVYLSPPSDTSWRRTNSDSALHQSTMTPAQQESFSGGSQDMQQKRVLLLTVPGMEETTSDADKSLSKQGWDTKKAGSSRPKSCEVPGINIFPSAEQEGGAAALVPAAHSTGGSLPDLSNIHFPSPLPTPLDPEEAPFPALSSSGSAGSLAANLTQLGIGSASPGMTTTPAPSQHRQPSVSPLSLGTDSRRPQSQQMSPTLSPLSPITQAVAMDALSLEQQLPPYPFFTQTSSQQQQQPPVASSLPQTPPLLQSSGLQRGPQLPPLSVTVPSTIPQSPPGSQSQPSMGIDINSASLQQYRSNAGSPANQSPTSPVSNQGFSPGSSPQLEQFNMIENAISSNSLYSPCSTLNYSQAAMMGLTGSHGSLQDSQQLNYSSHSNIPNIILTVTGESPPSLSKELTSSLAGVGDVSFDTDSQFPLDELKIDPLTLDGLHMLNDPDMVLTDPATEDTFRMDRL
SIO_010081: CRTC1
subclass of: SO_0000673
so part of: CRTC1
location: complement(join(400111..400322,401073..401253,407374..407475,409894..410145,410934..411067,413485..413708,414810..414853,415243..415328,416616..416710,417476..417537,418976..419113,423148..423264,440288..440464))
location: region:400111-440464:-1
so has part: feature:440288-440464:-1:exon
so has part: feature:423148-423264:-1:exon
so has part: feature:418976-419113:-1:exon
so has part: feature:417476-417537:-1:exon
so has part: feature:416616-416710:-1:exon
so has part: feature:415243-415328:-1:exon
so has part: feature:414810-414853:-1:exon
so has part: feature:413485-413708:-1:exon
so has part: feature:410934-411067:-1:exon
so has part: feature:409894-410145:-1:exon
so has part: feature:407374-407475:-1:exon
so has part: feature:401073-401253:-1:exon
so has part: feature:400111-400322:-1:exon

XP_030113006.1
type: Protein
SIO_000068: ncbiprotein

position:400111:-1
position: 400111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:440464:-1
position: 440464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:440288-440464:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:423148-423264:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:418976-419113:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:417476-417537:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:416616-416710:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:415243-415328:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:414810-414853:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:413485-413708:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:410934-411067:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:409894-410145:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:407374-407475:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:401073-401253:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:400111-400322:-1:exon

CRTC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: CRTC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CREB-regulated transcription coactivator 1 isoform X4
translation: MRAAPPRPRGGGCGRGKMAASNNPRKFSEKIALHNQKQAEETAAFEEVMKDLSLTRAHRLQLQKTQYLQLGQSRGQYYGGSLPNVNQIGNSAMDLPFQTPFQSSALDTSRTTRHHGLVDRVYRERNRLGSPHRRPLSVDKHGRQVDSCPYGTVYLSPPSDTSWRRTNSDSALHQSTMTPAQQESFSGGSQDMQQKRVLLLTVPGMEETTSDADKSLSKQGWDTKKAGSSRPKSCEVPGINIFPSAEQEGGAAALVPAAHSTGGSLPDLSNIHFPSPLPTPLDPEEAPFPALSSSGSAGSLAANLTQLGIGSASPGMTTTPAPSQHRQPSVSPLSLGTDSRRPQSQQMSPTLSPLSPITQAVAMDALSLEQQLPPYPFFTQTSSQQQQQPPVASSLPQTPPLLQSSGLQRGPQLPPLSVTVPSTIPQSPPGSQSQPSMGIDINSASLQQYRSNAGSPANQSPTSPVSNQGFSPGSSPQHSSMLGSVFGDSYYEQQLTARQANALSHQLEQFNMIENAISSNSLYSPCSTLNYSQAAMMGLTGSHGSLQDSQQLNYSSHSNIPNIILTVTGESPPSLSKELTSSLAGVGDVSFDTDSQFPLDELKIDPLTLDGLHMLNDPDMVLTDPATEDTFRMDRL
SIO_010081: CRTC1
subclass of: SO_0000673
so part of: CRTC1
location: complement(join(400111..400322,401073..401253,403344..403430,407374..407475,409894..410145,410934..411067,413485..413708,414810..414853,415243..415328,416616..416710,417476..417537,418976..419113,423148..423264,440288..440464))
location: region:400111-440464:-1
so has part: feature:440288-440464:-1:exon
so has part: feature:423148-423264:-1:exon
so has part: feature:418976-419113:-1:exon
so has part: feature:417476-417537:-1:exon
so has part: feature:416616-416710:-1:exon
so has part: feature:415243-415328:-1:exon
so has part: feature:414810-414853:-1:exon
so has part: feature:413485-413708:-1:exon
so has part: feature:410934-411067:-1:exon
so has part: feature:409894-410145:-1:exon
so has part: feature:407374-407475:-1:exon
so has part: feature:403344-403430:-1:exon
so has part: feature:401073-401253:-1:exon
so has part: feature:400111-400322:-1:exon

XP_030113003.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:440288-440464:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:423148-423264:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:418976-419113:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:417476-417537:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:416616-416710:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:415243-415328:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:414810-414853:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:413485-413708:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:410934-411067:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:409894-410145:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:407374-407475:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:403344-403430:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:401073-401253:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:400111-400322:-1:exon

CRTC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: CRTC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CREB-regulated transcription coactivator 1 isoform X3
translation: MRAAPPRPRGGGCGRGKMAASNNPRKFSEKIALHNQKQAEETAAFEEVMKDLSLTRAHRLQLQKTQYLQLGQSRGQYYGGSLPNVNQIGNSAMDLPFQTPFQSSALDTSRTTRHHGLVDRVYRERNRLGSPHRRPLSVDKHGRQVDSCPYGTVYLSPPSDTSWRRTNSDSALHQSTMTPAQQESFSGGSQDMQQKRVLLLTVPGMEETTSDADKSLSKQGWDTKKAGSSRPKSCEVPGINIFPSAEQEGGAAALVPAAHSTGGSLPDLSNIHFPSPLPTPLDPEEAPFPALSSSGSAGSLAANLTQLGIGSASPAGMTTTPAPSQHRQPSVSPLSLGTDSRRPQSQQMSPTLSPLSPITQAVAMDALSLEQQLPPYPFFTQTSSQQQQQPPVASSLPQTPPLLQSSGLQRGPQLPPLSVTVPSTIPQSPPGSQSQPSMGIDINSASLQQYRSNAGSPANQSPTSPVSNQGFSPGSSPQHSSMLGSVFGDSYYEQQLTARQANALSHQLEQFNMIENAISSNSLYSPCSTLNYSQAAMMGLTGSHGSLQDSQQLNYSSHSNIPNIILTVTGESPPSLSKELTSSLAGVGDVSFDTDSQFPLDELKIDPLTLDGLHMLNDPDMVLTDPATEDTFRMDRL
SIO_010081: CRTC1
subclass of: SO_0000673
so part of: CRTC1
location: complement(join(400111..400322,401073..401253,403344..403430,407374..407475,409894..410145,410934..411070,413485..413708,414810..414853,415243..415328,416616..416710,417476..417537,418976..419113,423148..423264,440288..440464))
location: region:400111-440464:-1
so has part: feature:440288-440464:-1:exon
so has part: feature:423148-423264:-1:exon
so has part: feature:418976-419113:-1:exon
so has part: feature:417476-417537:-1:exon
so has part: feature:416616-416710:-1:exon
so has part: feature:415243-415328:-1:exon
so has part: feature:414810-414853:-1:exon
so has part: feature:413485-413708:-1:exon
so has part: feature:410934-411070:-1:exon
so has part: feature:409894-410145:-1:exon
so has part: feature:407374-407475:-1:exon
so has part: feature:403344-403430:-1:exon
so has part: feature:401073-401253:-1:exon
so has part: feature:400111-400322:-1:exon

XP_030113002.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:440288-440464:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:423148-423264:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:418976-419113:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:417476-417537:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:416616-416710:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:415243-415328:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:414810-414853:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:413485-413708:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:410934-411070:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:409894-410145:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:407374-407475:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:403344-403430:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:401073-401253:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:400111-400322:-1:exon

CRTC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: CRTC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CREB-regulated transcription coactivator 1 isoform X2
translation: MRAAPPRPRGGGCGRGKMAASNNPRKFSEKIALHNQKQAEETAAFEEVMKDLSLTRAHRLQLQKTQYLQLGQSRGQYYGGSLPNVNQIGNSAMDLPFQHNGALAEAFGAVPVSLTPFQSSALDTSRTTRHHGLVDRVYRERNRLGSPHRRPLSVDKHGRQVDSCPYGTVYLSPPSDTSWRRTNSDSALHQSTMTPAQQESFSGGSQDMQQKRVLLLTVPGMEETTSDADKSLSKQGWDTKKAGSSRPKSCEVPGINIFPSAEQEGGAAALVPAAHSTGGSLPDLSNIHFPSPLPTPLDPEEAPFPALSSSGSAGSLAANLTQLGIGSASPGMTTTPAPSQHRQPSVSPLSLGTDSRRPQSQQMSPTLSPLSPITQAVAMDALSLEQQLPPYPFFTQTSSQQQQQPPVASSLPQTPPLLQSSGLQRGPQLPPLSVTVPSTIPQSPPGSQSQPSMGIDINSASLQQYRSNAGSPANQSPTSPVSNQGFSPGSSPQHSSMLGSVFGDSYYEQQLTARQANALSHQLEQFNMIENAISSNSLYSPCSTLNYSQAAMMGLTGSHGSLQDSQQLNYSSHSNIPNIILTVTGESPPSLSKELTSSLAGVGDVSFDTDSQFPLDELKIDPLTLDGLHMLNDPDMVLTDPATEDTFRMDRL
SIO_010081: CRTC1
subclass of: SO_0000673
so part of: CRTC1
location: complement(join(400111..400322,401073..401253,403344..403430,407374..407475,409894..410145,410934..411067,413485..413708,414810..414853,415243..415328,416616..416710,417476..417537,418976..419113,421778..421825,423148..423264,440288..440464))
location: region:400111-440464:-1
so has part: feature:440288-440464:-1:exon
so has part: feature:423148-423264:-1:exon
so has part: feature:421778-421825:-1:exon
so has part: feature:418976-419113:-1:exon
so has part: feature:417476-417537:-1:exon
so has part: feature:416616-416710:-1:exon
so has part: feature:415243-415328:-1:exon
so has part: feature:414810-414853:-1:exon
so has part: feature:413485-413708:-1:exon
so has part: feature:410934-411067:-1:exon
so has part: feature:409894-410145:-1:exon
so has part: feature:407374-407475:-1:exon
so has part: feature:403344-403430:-1:exon
so has part: feature:401073-401253:-1:exon
so has part: feature:400111-400322:-1:exon

XP_030113001.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:440288-440464:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:423148-423264:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:421778-421825:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:418976-419113:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:417476-417537:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:416616-416710:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:415243-415328:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:414810-414853:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:413485-413708:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:410934-411067:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:409894-410145:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:407374-407475:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:403344-403430:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:401073-401253:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:400111-400322:-1:exon

CRTC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: CRTC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CREB-regulated transcription coactivator 1 isoform X6
translation: MRAAPPRPRGGGCGRGKMAASNNPRKFSEKIALHNQKQAEETAAFEEVMKDLSLTRAHRLQLQKTQYLQLGQSRGQYYGGSLPNVNQIGNSAMDLPFQHNGALAEAFGAVPVSLTPFQSSALDTSRTTRHHGLVDRVYRERNRLGSPHRRPLSVDKHGRQVDSCPYGTVYLSPPSDTSWRRTNSDSALHQSTMTPAQQESFSGGSQDMQQKRVLLLTVPGMEETTSDADKSLSKQGWDTKKAGSSRPKSCEVPGINIFPSAEQEGGAAALVPAAHSTGGSLPDLSNIHFPSPLPTPLDPEEAPFPALSSSGSAGSLAANLTQLGIGSASPAGMTTTPAPSQHRQPSVSPLSLGTDSRRPQSQQMSPTLSPLSPITQAVAMDALSLEQQLPPYPFFTQTSSQQQQQPPVASSLPQTPPLLQSSGLQRGPQLPPLSVTVPSTIPQSPPGSQSQPSMGIDINSHSSMLGSVFGDSYYEQQLTARQANALSHQLEQFNMIENAISSNSLYSPCSTLNYSQAAMMGLTGSHGSLQDSQQLNYSSHSNIPNIILTVTGESPPSLSKELTSSLAGVGDVSFDTDSQFPLDELKIDPLTLDGLHMLNDPDMVLTDPATEDTFRMDRL
SIO_010081: CRTC1
subclass of: SO_0000673
so part of: CRTC1
location: complement(join(400111..400322,401073..401253,403344..403430,409894..410145,410934..411070,413485..413708,414810..414853,415243..415328,416616..416710,417476..417537,418976..419113,421778..421825,423148..423264,440288..440464))
location: region:400111-440464:-1
so has part: feature:440288-440464:-1:exon
so has part: feature:423148-423264:-1:exon
so has part: feature:421778-421825:-1:exon
so has part: feature:418976-419113:-1:exon
so has part: feature:417476-417537:-1:exon
so has part: feature:416616-416710:-1:exon
so has part: feature:415243-415328:-1:exon
so has part: feature:414810-414853:-1:exon
so has part: feature:413485-413708:-1:exon
so has part: feature:410934-411070:-1:exon
so has part: feature:409894-410145:-1:exon
so has part: feature:403344-403430:-1:exon
so has part: feature:401073-401253:-1:exon
so has part: feature:400111-400322:-1:exon

XP_030113005.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:440288-440464:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:423148-423264:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:421778-421825:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:418976-419113:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:417476-417537:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:416616-416710:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:415243-415328:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:414810-414853:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:413485-413708:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:410934-411070:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:409894-410145:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:403344-403430:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:401073-401253:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:400111-400322:-1:exon

CRTC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: CRTC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CREB-regulated transcription coactivator 1 isoform X5
translation: MRAAPPRPRGGGCGRGKMAASNNPRKFSEKIALHNQKQAEETAAFEEVMKDLSLTRAHRLQLQKTQYLQLGQSRGQYYGGSLPNVNQIGNSAMDLPFQHNGALAEAFGAVPVSLTPFQSSALDTSRTTRHHGLVDRVYRERNRLGSPHRRPLSVDKHGRQVDSCPYGTVYLSPPSDTSWRRTNSDSALHQSTMTPAQQESFSGGSQDMQQKRVLLLTVPGMEETTSDADKSLSKQGWDTKKAGSSRPKSCEVPGINIFPSAEQEGGAAALVPAAHSTGGSLPDLSNIHFPSPLPTPLDPEEAPFPALSSSGSAGSLAANLTQLGIGSASPAGMTTTPAPSQHRQPSVSPLSLGTDSRRPQSQQMSPTLSPLSPITQAVAMDALSLEQQLPPYPFFTQTSSQQQQQPPVASSLPQTPPLLQSSGLQRGPQLPPLSVTVPSTIPQSPPGSQSQPSMGIDINSASLQQYRSNAGSPANQSPTSPVSNQGFSPGSSPQLEQFNMIENAISSNSLYSPCSTLNYSQAAMMGLTGSHGSLQDSQQLNYSSHSNIPNIILTVTGESPPSLSKELTSSLAGVGDVSFDTDSQFPLDELKIDPLTLDGLHMLNDPDMVLTDPATEDTFRMDRL
SIO_010081: CRTC1
subclass of: SO_0000673
so part of: CRTC1
location: complement(join(400111..400322,401073..401253,407374..407475,409894..410145,410934..411070,413485..413708,414810..414853,415243..415328,416616..416710,417476..417537,418976..419113,421778..421825,423148..423264,440288..440464))
location: region:400111-440464:-1
so has part: feature:440288-440464:-1:exon
so has part: feature:423148-423264:-1:exon
so has part: feature:421778-421825:-1:exon
so has part: feature:418976-419113:-1:exon
so has part: feature:417476-417537:-1:exon
so has part: feature:416616-416710:-1:exon
so has part: feature:415243-415328:-1:exon
so has part: feature:414810-414853:-1:exon
so has part: feature:413485-413708:-1:exon
so has part: feature:410934-411070:-1:exon
so has part: feature:409894-410145:-1:exon
so has part: feature:407374-407475:-1:exon
so has part: feature:401073-401253:-1:exon
so has part: feature:400111-400322:-1:exon

XP_030113004.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:440288-440464:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:423148-423264:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:421778-421825:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:418976-419113:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:417476-417537:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:416616-416710:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:415243-415328:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:414810-414853:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:413485-413708:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:410934-411070:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:409894-410145:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:407374-407475:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:401073-401253:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:400111-400322:-1:exon

CRTC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: CRTC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CREB-regulated transcription coactivator 1 isoform X1
translation: MRAAPPRPRGGGCGRGKMAASNNPRKFSEKIALHNQKQAEETAAFEEVMKDLSLTRAHRLQLQKTQYLQLGQSRGQYYGGSLPNVNQIGNSAMDLPFQHNGALAEAFGAVPVSLTPFQSSALDTSRTTRHHGLVDRVYRERNRLGSPHRRPLSVDKHGRQVDSCPYGTVYLSPPSDTSWRRTNSDSALHQSTMTPAQQESFSGGSQDMQQKRVLLLTVPGMEETTSDADKSLSKQGWDTKKAGSSRPKSCEVPGINIFPSAEQEGGAAALVPAAHSTGGSLPDLSNIHFPSPLPTPLDPEEAPFPALSSSGSAGSLAANLTQLGIGSASPAGMTTTPAPSQHRQPSVSPLSLGTDSRRPQSQQMSPTLSPLSPITQAVAMDALSLEQQLPPYPFFTQTSSQQQQQPPVASSLPQTPPLLQSSGLQRGPQLPPLSVTVPSTIPQSPPGSQSQPSMGIDINSASLQQYRSNAGSPANQSPTSPVSNQGFSPGSSPQHSSMLGSVFGDSYYEQQLTARQANALSHQLEQFNMIENAISSNSLYSPCSTLNYSQAAMMGLTGSHGSLQDSQQLNYSSHSNIPNIILTVTGESPPSLSKELTSSLAGVGDVSFDTDSQFPLDELKIDPLTLDGLHMLNDPDMVLTDPATEDTFRMDRL
SIO_010081: CRTC1
subclass of: SO_0000673
so part of: CRTC1
location: complement(join(400111..400322,401073..401253,403344..403430,407374..407475,409894..410145,410934..411070,413485..413708,414810..414853,415243..415328,416616..416710,417476..417537,418976..419113,421778..421825,423148..423264,440288..440464))
location: region:400111-440464:-1
so has part: feature:440288-440464:-1:exon
so has part: feature:423148-423264:-1:exon
so has part: feature:421778-421825:-1:exon
so has part: feature:418976-419113:-1:exon
so has part: feature:417476-417537:-1:exon
so has part: feature:416616-416710:-1:exon
so has part: feature:415243-415328:-1:exon
so has part: feature:414810-414853:-1:exon
so has part: feature:413485-413708:-1:exon
so has part: feature:410934-411070:-1:exon
so has part: feature:409894-410145:-1:exon
so has part: feature:407374-407475:-1:exon
so has part: feature:403344-403430:-1:exon
so has part: feature:401073-401253:-1:exon
so has part: feature:400111-400322:-1:exon

XP_030113000.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:440288-440464:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:423148-423264:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:421778-421825:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:418976-419113:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:417476-417537:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:416616-416710:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:415243-415328:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:414810-414853:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:413485-413708:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:410934-411070:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:409894-410145:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:407374-407475:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:403344-403430:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:401073-401253:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:400111-400322:-1:exon

KLHL26
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: KLHL26
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(449099..466019)
location: region:449099-466019:-1
so has part: feature:449099-466019:-1:exon
subclass of: SO_0000010

100230034
type: Gene
SIO_000068: ncbigene

position:449099:-1
position: 449099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:466019:-1
position: 466019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:449099-466019:-1:exon

KLHL26
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: KLHL26
product: kelch like family member 26, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 63 samples with support for all annotated introns
transcript id: XM_041710964.1
SIO_010081: KLHL26
subclass of: SO_0000673
so part of: KLHL26
location: complement(join(449099..451892,454468..454650,465920..466019))
location: region:449099-466019:-1
so has part: feature:465920-466019:-1:exon
so has part: feature:454468-454650:-1:exon
so has part: feature:449099-451892:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:465920-466019:-1:exon

position:465920:-1
position: 465920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:454468-454650:-1:exon

position:454468:-1
position: 454468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:454650:-1
position: 454650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:449099-451892:-1:exon

position:451892:-1
position: 451892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KLHL26
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: KLHL26
product: kelch like family member 26, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_041710965.1
SIO_010081: KLHL26
subclass of: SO_0000673
so part of: KLHL26
location: complement(join(449099..451892,465920..466005))
location: region:449099-466005:-1
so has part: feature:465920-466005:-1:exon
so has part: feature:449099-451892:-1:exon

position:466005:-1
position: 466005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:465920-466005:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:449099-451892:-1:exon

KLHL26
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: KLHL26
product: kelch like family member 26, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_030257147.3
SIO_010081: KLHL26
subclass of: SO_0000673
so part of: KLHL26
location: complement(join(449099..451892,454468..454650,454766..456539))
location: region:449099-456539:-1
so has part: feature:454766-456539:-1:exon
so has part: feature:454468-454650:-1:exon
so has part: feature:449099-451892:-1:exon

position:456539:-1
position: 456539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:454766-456539:-1:exon

position:454766:-1
position: 454766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:454468-454650:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:449099-451892:-1:exon

KLHL26
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: KLHL26
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kelch-like protein 26 isoform X3
translation: MAESGGAEFGAERPSRAMFTGGMREASQDVIELKGVSAKGLKHIIDFAYSAEVTLDLDCIQDVLGAAVFLQMVPVVELCEEFLKSAMSVETCLNIGQMATTFSLASLKESVDAFTFRHFLQISEEEDFLHLPLERLVFFLQSNKLKSCSEIELFRAAVRWLQFDPARRASASQVLCHIRFPLMKSSELVDSVQTLDIMVEDVLCRQYLLEAFNYQILPFRQHEMQSPRTAIRSDALSLVTFGGTPYTDNDRTVSPKVFCLPDAGGRQFRELTEMEVGSSHSCVAVLDNFVYLVGGQQLQYRSGEGAVDVSYRYDPHLNQWLRIQAMQESRIQFQLNVLRGMVYATGGRNRSGSLASVEKYCPKDNEWTYVCSLKRRTWGHAGATAGDKLYISGGYGISVEDKKALHCYDPAADQWEFKTPMNEPRVLHAMVSANGRIYALGGRMDHVDRCFDVLAVEYYVPETDQWTTVSPMRTGQSEAGCCLLERKIYIVGGYNWHLNNVTSIVQVYNTETDEWERDLHFPESFAGIACAPVILPQVTSQR
SIO_010081: KLHL26
subclass of: SO_0000673
so part of: KLHL26
location: complement(join(450311..451892,465920..465966))
location: region:450311-465966:-1
so has part: feature:465920-465966:-1:exon
so has part: feature:450311-451892:-1:exon

XP_041566899.1
type: Protein
SIO_000068: ncbiprotein

position:450311:-1
position: 450311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:465966:-1
position: 465966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:465920-465966:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:450311-451892:-1:exon

KLHL26
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: KLHL26
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kelch-like protein 26 isoform X2
translation: MAESGGAEFGAERPSSMADKNSTLKCTFSAPGHSTTLLQGLASLRAQAQLLDVILTINNEVFQVHKVVLAACSDYFRAMFTGGMREASQDVIELKGVSAKGLKHIIDFAYSAEVTLDLDCIQDVLGAAVFLQMVPVVELCEEFLKSAMSVETCLNIGQMATTFSLASLKESVDAFTFRHFLQISEEEDFLHLPLERLVFFLQSNKLKSCSEIELFRAAVRWLQFDPARRASASQVLCHIRFPLMKSSELVDSVQTLDIMVEDVLCRQYLLEAFNYQILPFRQHEMQSPRTAIRSDALSLVTFGGTPYTDNDRTVSPKVFCLPDAGGRQFRELTEMEVGSSHSCVAVLDNFVYLVGGQQLQYRSGEGAVDVSYRYDPHLNQWLRIQAMQESRIQFQLNVLRGMVYATGGRNRSGSLASVEKYCPKDNEWTYVCSLKRRTWGHAGATAGDKLYISGGYGISVEDKKALHCYDPAADQWEFKTPMNEPRVLHAMVSANGRIYALGGRMDHVDRCFDVLAVEYYVPETDQWTTVSPMRTGQSEAGCCLLERKIYIVGGYNWHLNNVTSIVQVYNTETDEWERDLHFPESFAGIACAPVILPQVTSQR
SIO_010081: KLHL26
subclass of: SO_0000673
so part of: KLHL26
location: complement(join(450311..451892,454468..454650,465920..465966))
location: region:450311-465966:-1
so has part: feature:465920-465966:-1:exon
so has part: feature:454468-454650:-1:exon
so has part: feature:450311-451892:-1:exon

XP_041566898.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:465920-465966:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:454468-454650:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:450311-451892:-1:exon

KLHL26
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: KLHL26
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kelch-like protein 26 isoform X1
translation: MSPIWNPMCHRCQRISGQPGSVLWRRQLEVLMFSGWLPSMADKNSTLKCTFSAPGHSTTLLQGLASLRAQAQLLDVILTINNEVFQVHKVVLAACSDYFRAMFTGGMREASQDVIELKGVSAKGLKHIIDFAYSAEVTLDLDCIQDVLGAAVFLQMVPVVELCEEFLKSAMSVETCLNIGQMATTFSLASLKESVDAFTFRHFLQISEEEDFLHLPLERLVFFLQSNKLKSCSEIELFRAAVRWLQFDPARRASASQVLCHIRFPLMKSSELVDSVQTLDIMVEDVLCRQYLLEAFNYQILPFRQHEMQSPRTAIRSDALSLVTFGGTPYTDNDRTVSPKVFCLPDAGGRQFRELTEMEVGSSHSCVAVLDNFVYLVGGQQLQYRSGEGAVDVSYRYDPHLNQWLRIQAMQESRIQFQLNVLRGMVYATGGRNRSGSLASVEKYCPKDNEWTYVCSLKRRTWGHAGATAGDKLYISGGYGISVEDKKALHCYDPAADQWEFKTPMNEPRVLHAMVSANGRIYALGGRMDHVDRCFDVLAVEYYVPETDQWTTVSPMRTGQSEAGCCLLERKIYIVGGYNWHLNNVTSIVQVYNTETDEWERDLHFPESFAGIACAPVILPQVTSQR
SIO_010081: KLHL26
subclass of: SO_0000673
so part of: KLHL26
location: complement(join(450311..451892,454468..454650,454766..454881))
location: region:450311-454881:-1
so has part: feature:454766-454881:-1:exon
so has part: feature:454468-454650:-1:exon
so has part: feature:450311-451892:-1:exon

XP_030113007.3
type: Protein
SIO_000068: ncbiprotein

position:454881:-1
position: 454881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:454766-454881:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:454468-454650:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:450311-451892:-1:exon

TMEM59L
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: TMEM59L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(474112..480431)
location: region:474112-480431:-1
so has part: feature:474112-480431:-1:exon
subclass of: SO_0000010

105758951
type: Gene
SIO_000068: ncbigene

position:474112:-1
position: 474112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:480431:-1
position: 480431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:474112-480431:-1:exon

TMEM59L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: TMEM59L
product: transmembrane protein 59 like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 87 samples with support for all annotated introns
transcript id: XM_030256908.3
SIO_010081: TMEM59L
subclass of: SO_0000673
so part of: TMEM59L
location: complement(join(474112..475880,476034..476151,476257..476368,476659..476764,476856..477002,478554..478651,478860..478965,480249..480431))
location: region:474112-480431:-1
so has part: feature:480249-480431:-1:exon
so has part: feature:478860-478965:-1:exon
so has part: feature:478554-478651:-1:exon
so has part: feature:476856-477002:-1:exon
so has part: feature:476659-476764:-1:exon
so has part: feature:476257-476368:-1:exon
so has part: feature:476034-476151:-1:exon
so has part: feature:474112-475880:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:480249-480431:-1:exon

position:480249:-1
position: 480249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:478860-478965:-1:exon

position:478860:-1
position: 478860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:478965:-1
position: 478965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:478554-478651:-1:exon

position:478554:-1
position: 478554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:478651:-1
position: 478651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:476856-477002:-1:exon

position:476856:-1
position: 476856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:477002:-1
position: 477002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:476659-476764:-1:exon

position:476659:-1
position: 476659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:476764:-1
position: 476764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:476257-476368:-1:exon

position:476257:-1
position: 476257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:476368:-1
position: 476368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:476034-476151:-1:exon

position:476034:-1
position: 476034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:476151:-1
position: 476151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:474112-475880:-1:exon

position:475880:-1
position: 475880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TMEM59L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: TMEM59L
product: transmembrane protein 59 like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 85 samples with support for all annotated introns
transcript id: XM_030256907.3
SIO_010081: TMEM59L
subclass of: SO_0000673
so part of: TMEM59L
location: complement(join(474112..475880,476034..476175,476257..476368,476659..476764,476856..477002,478554..478651,478860..478965,480249..480431))
location: region:474112-480431:-1
so has part: feature:480249-480431:-1:exon
so has part: feature:478860-478965:-1:exon
so has part: feature:478554-478651:-1:exon
so has part: feature:476856-477002:-1:exon
so has part: feature:476659-476764:-1:exon
so has part: feature:476257-476368:-1:exon
so has part: feature:476034-476175:-1:exon
so has part: feature:474112-475880:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:480249-480431:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:478860-478965:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:478554-478651:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:476856-477002:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:476659-476764:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:476257-476368:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:476034-476175:-1:exon

position:476175:-1
position: 476175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:474112-475880:-1:exon

TMEM59L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: TMEM59L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 59-like isoform X2
translation: MAAPARRPRAPLALGLALLAAAAAAAAATDPFSPQLGDTGGCRGQCGRSLQRRAAADAVLNACYRGCRLFSICHFVDASAELNTTRAECEAACAEAYGNAEEQFGCVTGCRKQLPEVEESRKEKSLGLKAPSFSMLDLVSTFCNDIVSSAQSFISSTWTFYLQADDGKVVVFQSQPEMEFPAPEALEIQPAQPGSGLGSSPGVPQPHTGPRAKGDKPPVKEPRGRAKAHPPDPPQQEHDFLGCMSKRSGLPRWILAACLFLSIMVMLWLSCASLVTAPEQHVKPQPLSINGDKEYLEDLDGPGTFPLPPVIAVTLCPAHGGEDAGPLPLKVDLDKTIL
SIO_010081: TMEM59L
subclass of: SO_0000673
so part of: TMEM59L
location: complement(join(475719..475880,476034..476151,476257..476368,476659..476764,476856..477002,478554..478651,478860..478965,480249..480416))
location: region:475719-480416:-1
so has part: feature:480249-480416:-1:exon
so has part: feature:478860-478965:-1:exon
so has part: feature:478554-478651:-1:exon
so has part: feature:476856-477002:-1:exon
so has part: feature:476659-476764:-1:exon
so has part: feature:476257-476368:-1:exon
so has part: feature:476034-476151:-1:exon
so has part: feature:475719-475880:-1:exon

XP_030112768.3
type: Protein
SIO_000068: ncbiprotein

position:475719:-1
position: 475719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:480416:-1
position: 480416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:480249-480416:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:478860-478965:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:478554-478651:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:476856-477002:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:476659-476764:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:476257-476368:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:476034-476151:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:475719-475880:-1:exon

TMEM59L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: TMEM59L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 59-like isoform X1
translation: MAAPARRPRAPLALGLALLAAAAAAAAATDPFSPQLGDTGGCRGQCGRSLQRRAAADAVLNACYRGCRLFSICHFVDASAELNTTRAECEAACAEAYGNAEEQFGCVTGCRKQLPEVEESRKEKSLGLKAPSFSMLDLVSTFCNDIVSSAQSFISSTWTFYLQADDGKVVVFQSQPEMEFPAPEALEIQPAQPGSGLGSSPGVPQPHTGPRAKGDKPPVKEPRGRAKAHPPDPPQQEHDFLGCMSKRGVAGCYRRSGLPRWILAACLFLSIMVMLWLSCASLVTAPEQHVKPQPLSINGDKEYLEDLDGPGTFPLPPVIAVTLCPAHGGEDAGPLPLKVDLDKTIL
SIO_010081: TMEM59L
subclass of: SO_0000673
so part of: TMEM59L
location: complement(join(475719..475880,476034..476175,476257..476368,476659..476764,476856..477002,478554..478651,478860..478965,480249..480416))
location: region:475719-480416:-1
so has part: feature:480249-480416:-1:exon
so has part: feature:478860-478965:-1:exon
so has part: feature:478554-478651:-1:exon
so has part: feature:476856-477002:-1:exon
so has part: feature:476659-476764:-1:exon
so has part: feature:476257-476368:-1:exon
so has part: feature:476034-476175:-1:exon
so has part: feature:475719-475880:-1:exon

XP_030112767.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:480249-480416:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:478860-478965:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:478554-478651:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:476856-477002:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:476659-476764:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:476257-476368:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:476034-476175:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:475719-475880:-1:exon

CRLF1
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: CRLF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 484644..492964
location: region:484644-492964:1
so has part: feature:484644-492964:1:exon
subclass of: SO_0000010

100220468
type: Gene
SIO_000068: ncbigene

position:484644:1
position: 484644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:492964:1
position: 492964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:484644-492964:1:exon

CRLF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: CRLF1
product: cytokine receptor like factor 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_030256974.3
SIO_010081: CRLF1
subclass of: SO_0000673
so part of: CRLF1
location: join(484644..484814,489268..489546,490595..490724,491032..491201,491427..491584,491656..491824,492090..492272,492406..492964)
location: region:484644-492964:1
so has part: feature:484644-484814:1:exon
so has part: feature:489268-489546:1:exon
so has part: feature:490595-490724:1:exon
so has part: feature:491032-491201:1:exon
so has part: feature:491427-491584:1:exon
so has part: feature:491656-491824:1:exon
so has part: feature:492090-492272:1:exon
so has part: feature:492406-492964:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:484644-484814:1:exon

position:484814:1
position: 484814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:489268-489546:1:exon

position:489268:1
position: 489268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:489546:1
position: 489546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:490595-490724:1:exon

position:490595:1
position: 490595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:490724:1
position: 490724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:491032-491201:1:exon

position:491032:1
position: 491032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:491201:1
position: 491201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:491427-491584:1:exon

position:491427:1
position: 491427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:491584:1
position: 491584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:491656-491824:1:exon

position:491656:1
position: 491656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:491824:1
position: 491824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:492090-492272:1:exon

position:492090:1
position: 492090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:492272:1
position: 492272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:492406-492964:1:exon

position:492406:1
position: 492406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CRLF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: CRLF1
product: cytokine receptor like factor 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_030256973.3
SIO_010081: CRLF1
subclass of: SO_0000673
so part of: CRLF1
location: join(484645..484814,489268..489546,490595..490724,491032..491201,491427..491584,491656..491824,492090..492268,492406..492964)
location: region:484645-492964:1
so has part: feature:484645-484814:1:exon
so has part: feature:489268-489546:1:exon
so has part: feature:490595-490724:1:exon
so has part: feature:491032-491201:1:exon
so has part: feature:491427-491584:1:exon
so has part: feature:491656-491824:1:exon
so has part: feature:492090-492268:1:exon
so has part: feature:492406-492964:1:exon

position:484645:1
position: 484645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:484645-484814:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:489268-489546:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:490595-490724:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:491032-491201:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:491427-491584:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:491656-491824:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:492090-492268:1:exon

position:492268:1
position: 492268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:492406-492964:1:exon

CRLF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: CRLF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytokine receptor-like factor 1 isoform X1
translation: MPPPPLLPMLPLLLVLCPRLPRADPLSYPAVISPQDPTLLIGSSLVATCTVSPGVPLRAQDLYWTLNGRRLPHASYAALGPATLSVALARLNGSRQQSGDNLVCHSRDGSILAGSCLYVGLPPEKPVNITCWSKNMKDLTCKWAPGTEGETFLHTNYTLKYKRRWYGQDNTCQEYHTAGTYSCHIPKDLALFTPYEIWVEASNRLGVAVSDVVMLDILDVVTTDPPSDVHVSRVGDLEDQLSVRWSSPPALKDFLFQAKYQIQYRVEDSSEWKVVDDVGNQTSCRLAGLRPGTVYFVQVRCNPFSIYGSKKAGIWSDWSNPTAASTPRSERVAGGCDPKGGEQNTTLRRELKQFFGWVKKHAYGCSNLGIKLYDQWRVWLQKSHKTRNQVLPGDKL
SIO_010081: CRLF1
subclass of: SO_0000673
so part of: CRLF1
location: join(484733..484814,489268..489546,490595..490724,491032..491201,491427..491584,491656..491824,492090..492268,492406..492429)
location: region:484733-492429:1
so has part: feature:484733-484814:1:exon
so has part: feature:489268-489546:1:exon
so has part: feature:490595-490724:1:exon
so has part: feature:491032-491201:1:exon
so has part: feature:491427-491584:1:exon
so has part: feature:491656-491824:1:exon
so has part: feature:492090-492268:1:exon
so has part: feature:492406-492429:1:exon

XP_030112833.3
type: Protein
SIO_000068: ncbiprotein

position:484733:1
position: 484733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:492429:1
position: 492429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:484733-484814:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:489268-489546:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:490595-490724:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:491032-491201:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:491427-491584:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:491656-491824:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:492090-492268:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:492406-492429:1:exon

CRLF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: CRLF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytokine receptor-like factor 1 isoform X2
translation: MPPPPLLPMLPLLLVLCPRLPRADPLSYPAVISPQDPTLLIGSSLVATCTVSPGVPLRAQDLYWTLNGRRLPHASYAALGPATLSVALARLNGSRQQSGDNLVCHSRDGSILAGSCLYVGLPPEKPVNITCWSKNMKDLTCKWAPGTEGETFLHTNYTLKYKRRWYGQDNTCQEYHTAGTYSCHIPKDLALFTPYEIWVEASNRLGVAVSDVVMLDILDVVTTDPPSDVHVSRVGDLEDQLSVRWSSPPALKDFLFQAKYQIQYRVEDSSEWKVVDDVGNQTSCRLAGLRPGTVYFVQVRCNPFSIYGSKKAGIWSDWSNPTAASTPRSERVAGGCDPKGGEQNTTLRRELKQFFGWVKKHAYGCSNLGIKLYDQWRVWLQKSHKTRNQVGSSRR
SIO_010081: CRLF1
subclass of: SO_0000673
so part of: CRLF1
location: join(484733..484814,489268..489546,490595..490724,491032..491201,491427..491584,491656..491824,492090..492272,492406..492422)
location: region:484733-492422:1
so has part: feature:484733-484814:1:exon
so has part: feature:489268-489546:1:exon
so has part: feature:490595-490724:1:exon
so has part: feature:491032-491201:1:exon
so has part: feature:491427-491584:1:exon
so has part: feature:491656-491824:1:exon
so has part: feature:492090-492272:1:exon
so has part: feature:492406-492422:1:exon

XP_030112834.3
type: Protein
SIO_000068: ncbiprotein

position:492422:1
position: 492422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:484733-484814:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:489268-489546:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:490595-490724:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:491032-491201:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:491427-491584:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:491656-491824:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:492090-492272:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:492406-492422:1:exon

REX1BD
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: REX1BD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(493153..495750)
location: region:493153-495750:-1
so has part: feature:493153-495750:-1:exon
subclass of: SO_0000010

115490874
type: Gene
SIO_000068: ncbigene

position:493153:-1
position: 493153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:495750:-1
position: 495750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:493153-495750:-1:exon

REX1BD
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: REX1BD
product: required for excision 1-B domain containing
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 45 samples with support for all annotated introns
transcript id: XM_030256975.3
SIO_010081: REX1BD
subclass of: SO_0000673
so part of: REX1BD
location: complement(join(493153..493684,494066..494154,494238..494442,494909..494991,495677..495750))
location: region:493153-495750:-1
so has part: feature:495677-495750:-1:exon
so has part: feature:494909-494991:-1:exon
so has part: feature:494238-494442:-1:exon
so has part: feature:494066-494154:-1:exon
so has part: feature:493153-493684:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:495677-495750:-1:exon

position:495677:-1
position: 495677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:494909-494991:-1:exon

position:494909:-1
position: 494909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:494991:-1
position: 494991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:494238-494442:-1:exon

position:494238:-1
position: 494238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:494442:-1
position: 494442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:494066-494154:-1:exon

position:494066:-1
position: 494066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:494154:-1
position: 494154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:493153-493684:-1:exon

position:493684:-1
position: 493684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

REX1BD
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: REX1BD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: required for excision 1-B domain-containing protein
translation: MTGEAVRELLQRLRALQSERVETYRLFEEGHRAYLSSAPHYDFPRYRQLVHEVTVAFSGISREVLGIAGRLRDELGRPELAQHLARLQEREQEKLQLTARLQLAQQQAQEQPEVDAHQQEVRELKHKLIKTIEAISEILQDLKYDSEEVE
SIO_010081: REX1BD
subclass of: SO_0000673
so part of: REX1BD
location: complement(join(493612..493684,494066..494154,494238..494442,494909..494991,495677..495679))
location: region:493612-495679:-1
so has part: feature:495677-495679:-1:exon
so has part: feature:494909-494991:-1:exon
so has part: feature:494238-494442:-1:exon
so has part: feature:494066-494154:-1:exon
so has part: feature:493612-493684:-1:exon

XP_030112835.1
type: Protein
SIO_000068: ncbiprotein

position:493612:-1
position: 493612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:495679:-1
position: 495679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:495677-495679:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:494909-494991:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:494238-494442:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:494066-494154:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:493612-493684:-1:exon

UBA52
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: UBA52
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(496379..497601)
location: region:496379-497601:-1
so has part: feature:496379-497601:-1:exon
subclass of: SO_0000010

115490814
type: Gene
SIO_000068: ncbigene

position:496379:-1
position: 496379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:497601:-1
position: 497601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:496379-497601:-1:exon

UBA52
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: UBA52
product: ubiquitin A-52 residue ribosomal protein fusion product 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 2 long SRA reads, 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 140 samples with support for all annotated introns
transcript id: XM_030256684.3
SIO_010081: UBA52
subclass of: SO_0000673
so part of: UBA52
location: complement(join(496379..496519,496600..496702,496803..496889,496969..497087,497525..497601))
location: region:496379-497601:-1
so has part: feature:497525-497601:-1:exon
so has part: feature:496969-497087:-1:exon
so has part: feature:496803-496889:-1:exon
so has part: feature:496600-496702:-1:exon
so has part: feature:496379-496519:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:497525-497601:-1:exon

position:497525:-1
position: 497525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:496969-497087:-1:exon

position:496969:-1
position: 496969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:497087:-1
position: 497087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:496803-496889:-1:exon

position:496803:-1
position: 496803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:496889:-1
position: 496889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:496600-496702:-1:exon

position:496600:-1
position: 496600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:496702:-1
position: 496702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:496379-496519:-1:exon

position:496519:-1
position: 496519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

UBA52
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: UBA52
product: ubiquitin A-52 residue ribosomal protein fusion product 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 4 long SRA reads, 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 144 samples with support for all annotated introns
transcript id: XM_030256683.3
SIO_010081: UBA52
subclass of: SO_0000673
so part of: UBA52
location: complement(join(496379..496519,496600..496702,496803..496889,496969..497087,497516..497585))
location: region:496379-497585:-1
so has part: feature:497516-497585:-1:exon
so has part: feature:496969-497087:-1:exon
so has part: feature:496803-496889:-1:exon
so has part: feature:496600-496702:-1:exon
so has part: feature:496379-496519:-1:exon

position:497585:-1
position: 497585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:497516-497585:-1:exon

position:497516:-1
position: 497516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:496969-497087:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:496803-496889:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:496600-496702:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:496379-496519:-1:exon

UBA52
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: UBA52
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-60S ribosomal protein L40
translation: MQIFVKTLTGKTITLEVEPNDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTNNLRPKKKVK
SIO_010081: UBA52
subclass of: SO_0000673
so part of: UBA52
location: complement(join(496426..496519,496600..496702,496803..496889,496969..497071))
location: region:496426-497071:-1
so has part: feature:496969-497071:-1:exon
so has part: feature:496803-496889:-1:exon
so has part: feature:496600-496702:-1:exon
so has part: feature:496426-496519:-1:exon

XP_030112543.1
type: Protein
SIO_000068: ncbiprotein

position:496426:-1
position: 496426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:497071:-1
position: 497071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:496969-497071:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:496803-496889:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:496600-496702:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:496426-496519:-1:exon

UBA52
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: UBA52
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-60S ribosomal protein L40
translation: MQIFVKTLTGKTITLEVEPNDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGIIEPSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTNNLRPKKKVK
SIO_010081: UBA52
subclass of: SO_0000673
so part of: UBA52
location: complement(join(496426..496519,496600..496702,496803..496889,496969..497071))
location: region:496426-497071:-1
so has part: feature:496969-497071:-1:exon
so has part: feature:496803-496889:-1:exon
so has part: feature:496600-496702:-1:exon
so has part: feature:496426-496519:-1:exon

XP_030112544.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:496969-497071:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:496803-496889:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:496600-496702:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:496426-496519:-1:exon

KXD1
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: KXD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(498548..500851)
location: region:498548-500851:-1
so has part: feature:498548-500851:-1:exon
subclass of: SO_0000010

100229067
type: Gene
SIO_000068: ncbigene

position:498548:-1
position: 498548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:500851:-1
position: 500851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:498548-500851:-1:exon

KXD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: KXD1
product: KxDL motif containing 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 148 samples with support for all annotated introns
transcript id: XM_030256682.3
SIO_010081: KXD1
subclass of: SO_0000673
so part of: KXD1
location: complement(join(498548..499010,499562..499608,500070..500222,500318..500418,500720..500851))
location: region:498548-500851:-1
so has part: feature:500720-500851:-1:exon
so has part: feature:500318-500418:-1:exon
so has part: feature:500070-500222:-1:exon
so has part: feature:499562-499608:-1:exon
so has part: feature:498548-499010:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:500720-500851:-1:exon

position:500720:-1
position: 500720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:500318-500418:-1:exon

position:500318:-1
position: 500318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:500418:-1
position: 500418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:500070-500222:-1:exon

position:500070:-1
position: 500070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:500222:-1
position: 500222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:499562-499608:-1:exon

position:499562:-1
position: 499562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:499608:-1
position: 499608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:498548-499010:-1:exon

position:499010:-1
position: 499010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KXD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: KXD1
product: KxDL motif containing 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 137 samples with support for all annotated introns
transcript id: XM_030256681.3
SIO_010081: KXD1
subclass of: SO_0000673
so part of: KXD1
location: complement(join(498548..499010,499562..499608,500070..500222,500318..500418,500703..500828))
location: region:498548-500828:-1
so has part: feature:500703-500828:-1:exon
so has part: feature:500318-500418:-1:exon
so has part: feature:500070-500222:-1:exon
so has part: feature:499562-499608:-1:exon
so has part: feature:498548-499010:-1:exon

position:500828:-1
position: 500828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:500703-500828:-1:exon

position:500703:-1
position: 500703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:500318-500418:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:500070-500222:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:499562-499608:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:498548-499010:-1:exon

KXD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: KXD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kxDL motif-containing protein 1
translation: MEPTASQVFCGRVLGMVNAEDVNAIILAQKNMLDRFEKTNEMLLNFNNLSSVRMQQMSERFVHHTRTLVEMKKDLDSIFRRIRTLKGKLAKQYPEAFSNIHESPILEDDDDFDPVPKSTTTTIATSEQSTESCDTSPDVISPTTSQDFEDLSQGQYEGPAVNGQSLTDEDTASGLD
SIO_010081: KXD1
subclass of: SO_0000673
so part of: KXD1
location: complement(join(498775..499010,499562..499608,500070..500222,500318..500412))
location: region:498775-500412:-1
so has part: feature:500318-500412:-1:exon
so has part: feature:500070-500222:-1:exon
so has part: feature:499562-499608:-1:exon
so has part: feature:498775-499010:-1:exon

XP_030112541.1
type: Protein
SIO_000068: ncbiprotein

position:498775:-1
position: 498775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:500412:-1
position: 500412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:500318-500412:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:500070-500222:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:499562-499608:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:498775-499010:-1:exon

KXD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: KXD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kxDL motif-containing protein 1
translation: MEPTASQVFCGRVLGMVNAEDVNAIILAQKNMLDRFEKTNEMLLNFNNLSSVRMQQMSERFVHHTRTLVEMKKDLDSIFRRIRTLKGKLAKQYPEAFSNIHESPILEDDDDFDPVPKSTTTTIATSEQSTESCDTSPDVISPTTSQDFEDLSQGQYEGPAVNGQSLTDEDTASGLD
SIO_010081: KXD1
subclass of: SO_0000673
so part of: KXD1
location: complement(join(498775..499010,499562..499608,500070..500222,500318..500412))
location: region:498775-500412:-1
so has part: feature:500318-500412:-1:exon
so has part: feature:500070-500222:-1:exon
so has part: feature:499562-499608:-1:exon
so has part: feature:498775-499010:-1:exon

XP_030112542.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:500318-500412:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:500070-500222:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:499562-499608:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:498775-499010:-1:exon

FKBP8
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: FKBP8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 500839..506369
location: region:500839-506369:1
so has part: feature:500839-506369:1:exon
subclass of: SO_0000010

100231977
type: Gene
SIO_000068: ncbigene

position:500839:1
position: 500839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:506369:1
position: 506369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:500839-506369:1:exon

FKBP8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: FKBP8
product: FKBP prolyl isomerase 8, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 70 samples with support for all annotated introns
transcript id: XM_030256680.3
SIO_010081: FKBP8
subclass of: SO_0000673
so part of: FKBP8
location: join(500839..500919,501421..501708,501845..502014,502273..502361,502614..502831,502905..503077,503160..503237,505088..505225,505617..506369)
location: region:500839-506369:1
so has part: feature:500839-500919:1:exon
so has part: feature:501421-501708:1:exon
so has part: feature:501845-502014:1:exon
so has part: feature:502273-502361:1:exon
so has part: feature:502614-502831:1:exon
so has part: feature:502905-503077:1:exon
so has part: feature:503160-503237:1:exon
so has part: feature:505088-505225:1:exon
so has part: feature:505617-506369:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:500839-500919:1:exon

position:500919:1
position: 500919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:501421-501708:1:exon

position:501421:1
position: 501421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:501708:1
position: 501708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:501845-502014:1:exon

position:501845:1
position: 501845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:502014:1
position: 502014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:502273-502361:1:exon

position:502273:1
position: 502273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:502361:1
position: 502361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:502614-502831:1:exon

position:502614:1
position: 502614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:502831:1
position: 502831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:502905-503077:1:exon

position:502905:1
position: 502905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:503077:1
position: 503077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:503160-503237:1:exon

position:503160:1
position: 503160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:503237:1
position: 503237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:505088-505225:1:exon

position:505088:1
position: 505088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:505225:1
position: 505225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:505617-506369:1:exon

position:505617:1
position: 505617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FKBP8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: FKBP8
product: FKBP prolyl isomerase 8, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 63 samples with support for all annotated introns
transcript id: XM_002195887.6
SIO_010081: FKBP8
subclass of: SO_0000673
so part of: FKBP8
location: join(501062..501113,501421..501708,501845..502014,502273..502361,502614..502831,502905..503077,503160..503237,505088..505225,505617..506369)
location: region:501062-506369:1
so has part: feature:501062-501113:1:exon
so has part: feature:501421-501708:1:exon
so has part: feature:501845-502014:1:exon
so has part: feature:502273-502361:1:exon
so has part: feature:502614-502831:1:exon
so has part: feature:502905-503077:1:exon
so has part: feature:503160-503237:1:exon
so has part: feature:505088-505225:1:exon
so has part: feature:505617-506369:1:exon

position:501062:1
position: 501062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:501062-501113:1:exon

position:501113:1
position: 501113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:501421-501708:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:501845-502014:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:502273-502361:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:502614-502831:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:502905-503077:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:503160-503237:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:505088-505225:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:505617-506369:1:exon

FKBP8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: FKBP8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peptidyl-prolyl cis-trans isomerase FKBP8
translation: MASSGEEARSGSPERAGTGTEPAADAAQLDTAEDFEVLEDEEEEEEEDDLSELPPLEAVGRPAAPAREDAQPPERGAGGAAGDPEQWLDVLGNGLLKKKTLVPGQGVDSRPQKGQDVTIRLKATLEDGTVVEEDPALTFTLGDCDVLQALDLCVQLLEMGETALIVSEAKYCYGAQGRSPDIPPNASLTLEVELLAARDAPDLELLSGKEKIQLANRKRERGNFFYQQADYVLAINSYDIALRIAGSSSKVDFSPDEEAELLDVKVKCLNNLAASQLKLDHFKAALKSCNLVLEHQPGNIKALFRKGKVLAQQGEYREAIPILKAALKLEPSNKTIHAELSKLVKKHADQRNVETEMYRKMLGNPSTASTPRKCKDKLPWSIPWKWLFGATAIALGGVALSVVIAARN
SIO_010081: FKBP8
subclass of: SO_0000673
so part of: FKBP8
location: join(501435..501708,501845..502014,502273..502361,502614..502831,502905..503077,503160..503237,505088..505225,505617..505703)
location: region:501435-505703:1
so has part: feature:501435-501708:1:exon
so has part: feature:501845-502014:1:exon
so has part: feature:502273-502361:1:exon
so has part: feature:502614-502831:1:exon
so has part: feature:502905-503077:1:exon
so has part: feature:503160-503237:1:exon
so has part: feature:505088-505225:1:exon
so has part: feature:505617-505703:1:exon

XP_030112540.3
type: Protein
SIO_000068: ncbiprotein

position:501435:1
position: 501435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:505703:1
position: 505703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:501435-501708:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:501845-502014:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:502273-502361:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:502614-502831:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:502905-503077:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:503160-503237:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:505088-505225:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:505617-505703:1:exon

FKBP8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: FKBP8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peptidyl-prolyl cis-trans isomerase FKBP8
translation: MASSGEEARSGSPERAGTGTEPAADAAQLDTAEDFEVLEDEEEEEEEDDLSELPPLEAVGRPAAPAREDAQPPERGAGGAAGDPEQWLDVLGNGLLKKKTLVPGQGVDSRPQKGQDVTIRLKATLEDGTVVEEDPALTFTLGDCDVLQALDLCVQLLEMGETALIVSEAKYCYGAQGRSPDIPPNASLTLEVELLAARDAPDLELLSGKEKIQLANRKRERGNFFYQQADYVLAINSYDIALRIAGSSSKVDFSPDEEAELLDVKVKCLNNLAASQLKLDHFKAALKSCNLVLEHQPGNIKALFRKGKVLAQQGEYREAIPILKAALKLEPSNKTIHAELSKLVKKHADQRNVETEMYRKMLGNPSTASTPRKCKDKLPWSIPWKWLFGATAIALGGVALSVVIAARN
SIO_010081: FKBP8
subclass of: SO_0000673
so part of: FKBP8
location: join(501435..501708,501845..502014,502273..502361,502614..502831,502905..503077,503160..503237,505088..505225,505617..505703)
location: region:501435-505703:1
so has part: feature:501435-501708:1:exon
so has part: feature:501845-502014:1:exon
so has part: feature:502273-502361:1:exon
so has part: feature:502614-502831:1:exon
so has part: feature:502905-503077:1:exon
so has part: feature:503160-503237:1:exon
so has part: feature:505088-505225:1:exon
so has part: feature:505617-505703:1:exon

XP_002195923.5
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:501435-501708:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:501845-502014:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:502273-502361:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:502614-502831:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:502905-503077:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:503160-503237:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:505088-505225:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:505617-505703:1:exon

ELL
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: ELL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 507303..559399
location: region:507303-559399:1
so has part: feature:507303-559399:1:exon
subclass of: SO_0000010

100225261
type: Gene
SIO_000068: ncbigene

position:507303:1
position: 507303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:559399:1
position: 559399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:507303-559399:1:exon

ELL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: ELL
product: elongation factor for RNA polymerase II
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs, 13 long SRA reads, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 95 samples with support for all annotated introns
transcript id: XM_030256638.3
SIO_010081: ELL
subclass of: SO_0000673
so part of: ELL
location: join(507303..507480,531377..531424,536204..536325,536625..536788,539637..539890,542901..543025,545967..546063,548805..549303,551803..551869,554212..554383,555378..555422,556436..559399)
location: region:507303-559399:1
so has part: feature:507303-507480:1:exon
so has part: feature:531377-531424:1:exon
so has part: feature:536204-536325:1:exon
so has part: feature:536625-536788:1:exon
so has part: feature:539637-539890:1:exon
so has part: feature:542901-543025:1:exon
so has part: feature:545967-546063:1:exon
so has part: feature:548805-549303:1:exon
so has part: feature:551803-551869:1:exon
so has part: feature:554212-554383:1:exon
so has part: feature:555378-555422:1:exon
so has part: feature:556436-559399:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:507303-507480:1:exon

position:507480:1
position: 507480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:531377-531424:1:exon

position:531377:1
position: 531377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:531424:1
position: 531424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:536204-536325:1:exon

position:536204:1
position: 536204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:536325:1
position: 536325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:536625-536788:1:exon

position:536625:1
position: 536625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:536788:1
position: 536788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:539637-539890:1:exon

position:539637:1
position: 539637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:539890:1
position: 539890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:542901-543025:1:exon

position:542901:1
position: 542901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:543025:1
position: 543025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:545967-546063:1:exon

position:545967:1
position: 545967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:546063:1
position: 546063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:548805-549303:1:exon

position:548805:1
position: 548805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:549303:1
position: 549303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:551803-551869:1:exon

position:551803:1
position: 551803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:551869:1
position: 551869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:554212-554383:1:exon

position:554212:1
position: 554212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:554383:1
position: 554383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:555378-555422:1:exon

position:555378:1
position: 555378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:555422:1
position: 555422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:556436-559399:1:exon

position:556436:1
position: 556436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ELL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: ELL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA polymerase II elongation factor ELL
translation: MAALQAERGYGLSCGRLGRGTRVSVFHVKLTESALRAFESYQACKDAVTSKPVIQFQGSQGHIAIPRPDRPAEVRTFTFYLSNIGKDSPQGSFDCIQQYVSSNGNIHLDCLGSIQDKITVCATDDSYQKARQSMAQAEEETRSRSAIVIKPGGRYVGKKVQVRKPAPGASDAVPSRKRPTPVNLASAIKRGNSAISQRPFKDRVVHLLALKPYKKPELILRLQKDGLSQQDKDLLDNLLQQVANLSAKDSTFTLKDCVYKEVQKDWPGYSEGDQQLLKRILVRKLCQPQNSSAFQGEAPSLSPPKDTLNSSSPPQKRPLPAEFIDPLANKKPRISHLAHRAQPTLNGKLNSSNGKDSLAPPALPVPLPEPVGSSSSLPALELPRPHDPLADVSNDLAHNGRDCESTEPPERLSHPLPTDCAQSSKHNCGSYVKSKKKSKKHKDKEKERKEKKSEEKCKEEKQNCEVIKNADLVSVPQEQVPGLNGTCNNSSVPTSTSEMPDYLLKYAAISSSEQRQSYKNDFNAEYNEYRDLHARIERITRRFTQLDAKLKQLLQGSEEYKTIHDQILQEYRKIKKTNPNYSQEKNRCEYLHNKLAHIKKLIAEYDQQQF
SIO_010081: ELL
subclass of: SO_0000673
so part of: ELL
location: join(507346..507480,531377..531424,536204..536325,536625..536788,539637..539890,542901..543025,545967..546063,548805..549303,551803..551869,554212..554383,555378..555422,556436..556540)
location: region:507346-556540:1
so has part: feature:507346-507480:1:exon
so has part: feature:531377-531424:1:exon
so has part: feature:536204-536325:1:exon
so has part: feature:536625-536788:1:exon
so has part: feature:539637-539890:1:exon
so has part: feature:542901-543025:1:exon
so has part: feature:545967-546063:1:exon
so has part: feature:548805-549303:1:exon
so has part: feature:551803-551869:1:exon
so has part: feature:554212-554383:1:exon
so has part: feature:555378-555422:1:exon
so has part: feature:556436-556540:1:exon

XP_030112498.2
type: Protein
SIO_000068: ncbiprotein

position:507346:1
position: 507346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:556540:1
position: 556540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:507346-507480:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:531377-531424:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:536204-536325:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:536625-536788:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:539637-539890:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:542901-543025:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:545967-546063:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:548805-549303:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:551803-551869:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:554212-554383:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:555378-555422:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:556436-556540:1:exon

LOC121471223
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121471223
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 507505..527936
location: region:507505-527936:1
so has part: feature:507505-527936:1:exon
subclass of: SO_0000011

121471223
type: Gene
SIO_000068: ncbigene

position:507505:1
position: 507505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:527936:1
position: 527936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:507505-527936:1:exon

LOC121471223
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC121471223
product: uncharacterized LOC121471223
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_005982636.1
SIO_010081: LOC121471223
subclass of: SO_0000673
so part of: LOC121471223
location: join(507505..508784,511784..527936)
location: region:507505-527936:1
so has part: feature:507505-508784:1:exon
so has part: feature:511784-527936:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:507505-508784:1:exon

position:508784:1
position: 508784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:511784-527936:1:exon

position:511784:1
position: 511784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ISYNA1
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: ISYNA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 564184..569149
location: region:564184-569149:1
so has part: feature:564184-569149:1:exon
subclass of: SO_0000010

115490861
type: Gene
SIO_000068: ncbigene

position:564184:1
position: 564184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:569149:1
position: 569149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:564184-569149:1:exon

ISYNA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: ISYNA1
product: inositol-3-phosphate synthase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 1 long SRA read, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 114 samples with support for all annotated introns
transcript id: XM_032743860.2
SIO_010081: ISYNA1
subclass of: SO_0000673
so part of: ISYNA1
location: join(564184..564326,564432..564593,565315..565444,565517..565710,566182..566331,566409..566624,566698..566862,566967..567080,567160..567377,568750..569149)
location: region:564184-569149:1
so has part: feature:564184-564326:1:exon
so has part: feature:564432-564593:1:exon
so has part: feature:565315-565444:1:exon
so has part: feature:565517-565710:1:exon
so has part: feature:566182-566331:1:exon
so has part: feature:566409-566624:1:exon
so has part: feature:566698-566862:1:exon
so has part: feature:566967-567080:1:exon
so has part: feature:567160-567377:1:exon
so has part: feature:568750-569149:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:564184-564326:1:exon

position:564326:1
position: 564326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:564432-564593:1:exon

position:564432:1
position: 564432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:564593:1
position: 564593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:565315-565444:1:exon

position:565315:1
position: 565315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:565444:1
position: 565444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:565517-565710:1:exon

position:565517:1
position: 565517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:565710:1
position: 565710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:566182-566331:1:exon

position:566182:1
position: 566182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:566331:1
position: 566331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:566409-566624:1:exon

position:566409:1
position: 566409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:566624:1
position: 566624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:566698-566862:1:exon

position:566698:1
position: 566698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:566862:1
position: 566862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:566967-567080:1:exon

position:566967:1
position: 566967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:567080:1
position: 567080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:567160-567377:1:exon

position:567160:1
position: 567160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:567377:1
position: 567377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:568750-569149:1:exon

position:568750:1
position: 568750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ISYNA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: ISYNA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inositol-3-phosphate synthase 1
translation: MAEPFLVESPDVTYSQDFIEAKYTYSTAHVCRENGVTKVRPCSTRFTFRTGRQVPRLGVMLVGWGGNNGTTVTAAVLANRLGLSWMTKTGRKTANYYGSLLQASTVCLGTGPSGDVYVPFRDLLPMVHPNDIVFDGWDISSLNLAEAMRRAEVLEWPLQEQLWPHMEKMKPRPSIYIPQFIAANQEERADNVLSGSMAEQVEQIRRDIRDFKESSGVDKVIVLWTANTERFCDIVPGLNDTADNLLRAIERGLEVSPSTLFAVASVLEGCAYINGSPQNTFVPGAVELAAQRRVFIGGDDFKSGQTKLKSVLVDFLVGAGLKTKSIVSYNHLGNNDGKNLSAPQQFRSKEISKSNVVDDTVQANPVLYGPQDKPDHCVVIKYVPYVGDSKRALDEYTSEIMMGGTNTIVIHNTCEDSLLASPIILDLAILTELCQRITFCTEADPEFQGFHSVLSILAFLCKAPLVPEGTPVVNALFRQRSCIENILRACLGLPPQTHMLLEHKMQRPAPTPGRACPGGPACPLHPKKSPAAPAQLNGHPCAPRAPRAPLHIDGTD
SIO_010081: ISYNA1
subclass of: SO_0000673
so part of: ISYNA1
location: join(564213..564326,564432..564593,565315..565444,565517..565710,566182..566331,566409..566624,566698..566862,566967..567080,567160..567377,568750..568957)
location: region:564213-568957:1
so has part: feature:564213-564326:1:exon
so has part: feature:564432-564593:1:exon
so has part: feature:565315-565444:1:exon
so has part: feature:565517-565710:1:exon
so has part: feature:566182-566331:1:exon
so has part: feature:566409-566624:1:exon
so has part: feature:566698-566862:1:exon
so has part: feature:566967-567080:1:exon
so has part: feature:567160-567377:1:exon
so has part: feature:568750-568957:1:exon

XP_032599751.2
type: Protein
SIO_000068: ncbiprotein

position:564213:1
position: 564213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:568957:1
position: 568957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:564213-564326:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:564432-564593:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:565315-565444:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:565517-565710:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:566182-566331:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:566409-566624:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:566698-566862:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:566967-567080:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:567160-567377:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:568750-568957:1:exon

SSBP4
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: SSBP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(571276..581311)
location: region:571276-581311:-1
so has part: feature:571276-581311:-1:exon
subclass of: SO_0000010

115490821
type: Gene
SIO_000068: ncbigene

position:571276:-1
position: 571276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:581311:-1
position: 581311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:571276-581311:-1:exon

SSBP4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: SSBP4
product: single stranded DNA binding protein 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 28 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 97 samples with support for all annotated introns
transcript id: XM_032743866.2
SIO_010081: SSBP4
subclass of: SO_0000673
so part of: SSBP4
location: complement(join(571276..571549,572071..572172,572967..572995,573511..573589,573689..573759,574019..574073,574168..574203,574292..574337,574433..574500,575688..575758,575856..575925,575998..576057,576583..576672,578682..578766,579476..579537,579661..579733,581124..581311))
location: region:571276-581311:-1
so has part: feature:581124-581311:-1:exon
so has part: feature:579661-579733:-1:exon
so has part: feature:579476-579537:-1:exon
so has part: feature:578682-578766:-1:exon
so has part: feature:576583-576672:-1:exon
so has part: feature:575998-576057:-1:exon
so has part: feature:575856-575925:-1:exon
so has part: feature:575688-575758:-1:exon
so has part: feature:574433-574500:-1:exon
so has part: feature:574292-574337:-1:exon
so has part: feature:574168-574203:-1:exon
so has part: feature:574019-574073:-1:exon
so has part: feature:573689-573759:-1:exon
so has part: feature:573511-573589:-1:exon
so has part: feature:572967-572995:-1:exon
so has part: feature:572071-572172:-1:exon
so has part: feature:571276-571549:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:581124-581311:-1:exon

position:581124:-1
position: 581124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:579661-579733:-1:exon

position:579661:-1
position: 579661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:579733:-1
position: 579733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:579476-579537:-1:exon

position:579476:-1
position: 579476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:579537:-1
position: 579537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:578682-578766:-1:exon

position:578682:-1
position: 578682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:578766:-1
position: 578766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:576583-576672:-1:exon

position:576583:-1
position: 576583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:576672:-1
position: 576672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:575998-576057:-1:exon

position:575998:-1
position: 575998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:576057:-1
position: 576057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:575856-575925:-1:exon

position:575856:-1
position: 575856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:575925:-1
position: 575925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:575688-575758:-1:exon

position:575688:-1
position: 575688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:575758:-1
position: 575758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:574433-574500:-1:exon

position:574433:-1
position: 574433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:574500:-1
position: 574500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:574292-574337:-1:exon

position:574292:-1
position: 574292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:574337:-1
position: 574337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:574168-574203:-1:exon

position:574168:-1
position: 574168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:574203:-1
position: 574203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:574019-574073:-1:exon

position:574019:-1
position: 574019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:574073:-1
position: 574073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:573689-573759:-1:exon

position:573689:-1
position: 573689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:573759:-1
position: 573759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:573511-573589:-1:exon

position:573511:-1
position: 573511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:573589:-1
position: 573589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:572967-572995:-1:exon

position:572967:-1
position: 572967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:572995:-1
position: 572995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:572071-572172:-1:exon

position:572071:-1
position: 572071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:572172:-1
position: 572172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:571276-571549:-1:exon

position:571549:-1
position: 571549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SSBP4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: SSBP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: single-stranded DNA-binding protein 4
translation: MYAKGKGSGVPSDGQAREKLALYVYEYLLHVGAQKSAQTFLSEIRWEKNITLGEPPGFLHSWWCVFWDLYCAAPDRRETCEHSSEAKAFHDYSAAAAPSPVMGSLPPGDGMAGGPVPPAFFQPFMSPRYPGGPRPPLRMPTQPPVGVPGSQPLLPSAMDPAARSQGHPGMGGPMQRMNPPRGMAGMGPQSYGSGMRPPPSSLAGPGMPTMNMGPGGRGPWPNPNANSIAYSSSSPGNYVGPPGGGGPPGTPILPSPGDSTNSSENMYTMMNPIGPAGNRPNFPMGPGPEGPMGGMSAMEPHHMNGSLGSGDMDGLPKSSPSNLGALSNPPGTPRDDAELSSNFLNPFQSDSYSPSMTMSV
SIO_010081: SSBP4
subclass of: SO_0000673
so part of: SSBP4
location: complement(join(571520..571549,572071..572172,572967..572995,573511..573589,573689..573759,574019..574073,574168..574203,574292..574337,574433..574500,575688..575758,575856..575925,575998..576057,576583..576672,578682..578766,579476..579537,579661..579733,581124..581179))
location: region:571520-581179:-1
so has part: feature:581124-581179:-1:exon
so has part: feature:579661-579733:-1:exon
so has part: feature:579476-579537:-1:exon
so has part: feature:578682-578766:-1:exon
so has part: feature:576583-576672:-1:exon
so has part: feature:575998-576057:-1:exon
so has part: feature:575856-575925:-1:exon
so has part: feature:575688-575758:-1:exon
so has part: feature:574433-574500:-1:exon
so has part: feature:574292-574337:-1:exon
so has part: feature:574168-574203:-1:exon
so has part: feature:574019-574073:-1:exon
so has part: feature:573689-573759:-1:exon
so has part: feature:573511-573589:-1:exon
so has part: feature:572967-572995:-1:exon
so has part: feature:572071-572172:-1:exon
so has part: feature:571520-571549:-1:exon

XP_032599757.1
type: Protein
SIO_000068: ncbiprotein

position:571520:-1
position: 571520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:581179:-1
position: 581179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:581124-581179:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:579661-579733:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:579476-579537:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:578682-578766:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:576583-576672:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:575998-576057:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:575856-575925:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:575688-575758:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:574433-574500:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:574292-574337:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:574168-574203:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:574019-574073:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:573689-573759:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:573511-573589:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:572967-572995:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:572071-572172:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:571520-571549:-1:exon

LOC115490883
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC115490883
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 581826..584892
location: region:581826-584892:1
so has part: feature:581826-584892:1:exon
subclass of: SO_0000010

115490883
type: Gene
SIO_000068: ncbigene

position:581826:1
position: 581826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:584892:1
position: 584892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:581826-584892:1:exon

LOC115490883
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC115490883
product: leucine-rich repeat-containing protein 25-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_032743885.2
SIO_010081: LOC115490883
subclass of: SO_0000673
so part of: LOC115490883
location: join(581826..582684,582867..583716,584251..584892)
location: region:581826-584892:1
so has part: feature:581826-582684:1:exon
so has part: feature:582867-583716:1:exon
so has part: feature:584251-584892:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:581826-582684:1:exon

position:582684:1
position: 582684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:582867-583716:1:exon

position:582867:1
position: 582867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:583716:1
position: 583716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:584251-584892:1:exon

position:584251:1
position: 584251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115490883
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC115490883
product: leucine-rich repeat-containing protein 25-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 60 samples with support for all annotated introns
transcript id: XM_041721625.1
SIO_010081: LOC115490883
subclass of: SO_0000673
so part of: LOC115490883
location: join(582719..583716,584251..584892)
location: region:582719-584892:1
so has part: feature:582719-583716:1:exon
so has part: feature:584251-584892:1:exon

position:582719:1
position: 582719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:582719-583716:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:584251-584892:1:exon

LOC115490883
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC115490883
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat-containing protein 25-like isoform X1
translation: MGGPDSRFPPGCRRWGRTMGLPAAPLVLLLLLLQPMSSLLLLSPCFPLLLDISEELDLSNRSSGCAELDWSPFQRHRRLLLRHNGIEALSPSARLGPALEELDLAENRLRELPRGFFSNATALRELRLEGNPLRALPRAAFQPQLRSLSLSCRCDLLATVVTLCARSGLRCLCFTPPPQQHPFNATEFHARHCGLGAGLVAAVAAAVAGLVALAVVAALWWRRRRAGAAVGGVGRGKQNPTGNLRQPRYISRDTGSGPADVADVPDYENVFVSPGTAPGAAHGWAPAWREPRYSPQVPLDEDYFLESAADPGAQPIYANTLGPTEDIYIVPAH
SIO_010081: LOC115490883
subclass of: SO_0000673
so part of: LOC115490883
location: join(582836..583716,584251..584371)
location: region:582836-584371:1
so has part: feature:582836-583716:1:exon
so has part: feature:584251-584371:1:exon

XP_041577559.1
type: Protein
SIO_000068: ncbiprotein

position:582836:1
position: 582836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:584371:1
position: 584371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:582836-583716:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:584251-584371:1:exon

LOC115490883
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC115490883
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat-containing protein 25-like isoform X2
translation: MGLPAAPLVLLLLLLQPMSSLLLLSPCFPLLLDISEELDLSNRSSGCAELDWSPFQRHRRLLLRHNGIEALSPSARLGPALEELDLAENRLRELPRGFFSNATALRELRLEGNPLRALPRAAFQPQLRSLSLSCRCDLLATVVTLCARSGLRCLCFTPPPQQHPFNATEFHARHCGLGAGLVAAVAAAVAGLVALAVVAALWWRRRRAGAAVGGVGRGKQNPTGNLRQPRYISRDTGSGPADVADVPDYENVFVSPGTAPGAAHGWAPAWREPRYSPQVPLDEDYFLESAADPGAQPIYANTLGPTEDIYIVPAH
SIO_010081: LOC115490883
subclass of: SO_0000673
so part of: LOC115490883
location: join(582890..583716,584251..584371)
location: region:582890-584371:1
so has part: feature:582890-583716:1:exon
so has part: feature:584251-584371:1:exon

XP_032599776.2
type: Protein
SIO_000068: ncbiprotein

position:582890:1
position: 582890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:582890-583716:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:584251-584371:1:exon

GDF15
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: GDF15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(585185..588469)
location: region:585185-588469:-1
so has part: feature:585185-588469:-1:exon
subclass of: SO_0000010

115490882
type: Gene
SIO_000068: ncbigene

position:585185:-1
position: 585185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:588469:-1
position: 588469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:585185-588469:-1:exon

GDF15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: GDF15
product: growth differentiation factor 15
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030256990.3
SIO_010081: GDF15
subclass of: SO_0000673
so part of: GDF15
location: complement(join(585185..586793,587483..588469))
location: region:585185-588469:-1
so has part: feature:587483-588469:-1:exon
so has part: feature:585185-586793:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:587483-588469:-1:exon

position:587483:-1
position: 587483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:585185-586793:-1:exon

position:586793:-1
position: 586793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GDF15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: GDF15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: growth/differentiation factor 15
translation: MPRGAMPGALRGFGAALTCLQLLLLPAAVDPRPHAWQQDRLQLEAVKKELLERLGMPAPPVLRRPLDQESIQRAQRLYQQKVAELAGNRSREEEEEEEEEEEDAVSRTRRLHRLTPTLLDIPESQRDSQGHRDAPGHREPRGPYRYHLLLSRSADFHRQLRVVRAELKLSEQPPEDTEEPPRVSISIPRGAEGSRRRLRRLRELRGDSRSLDLTGALQLWVAGPEPTLLLRLDSSSALGTSAGKTPVLEVETLEKPARASRRARGLEEECGKSDGKCCLKSLKVSFQDIGWSDWVIAPHSYYMRFCEGSCPHNYKPASMHAQIQSRVHSLSKAAPPPCCVPAGYDPMVLMHLDSEGRLVSSLFQDMLVTRCHCA
SIO_010081: GDF15
subclass of: SO_0000673
so part of: GDF15
location: complement(join(586021..586793,587483..587834))
location: region:586021-587834:-1
so has part: feature:587483-587834:-1:exon
so has part: feature:586021-586793:-1:exon

XP_030112850.3
type: Protein
SIO_000068: ncbiprotein

position:586021:-1
position: 586021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:587834:-1
position: 587834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:587483-587834:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:586021-586793:-1:exon

LOC115490863
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC115490863
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 588503..595252
location: region:588503-595252:1
so has part: feature:588503-595252:1:exon
subclass of: SO_0000011

115490863
type: Gene
SIO_000068: ncbigene

position:588503:1
position: 588503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:595252:1
position: 595252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:588503-595252:1:exon

LOC115490863
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC115490863
product: uncharacterized LOC115490863
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XR_003956800.3
SIO_010081: LOC115490863
subclass of: SO_0000673
so part of: LOC115490863
location: join(588503..592309,593736..595252)
location: region:588503-595252:1
so has part: feature:588503-592309:1:exon
so has part: feature:593736-595252:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:588503-592309:1:exon

position:592309:1
position: 592309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:593736-595252:1:exon

position:593736:1
position: 593736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PGPEP1
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: PGPEP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(593704..610912)
location: region:593704-610912:-1
so has part: feature:593704-610912:-1:exon
subclass of: SO_0000010

105758950
type: Gene
SIO_000068: ncbigene

position:593704:-1
position: 593704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:610912:-1
position: 610912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:593704-610912:-1:exon

PGPEP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: PGPEP1
product: pyroglutamyl-peptidase I, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 49 samples with support for all annotated introns
transcript id: XM_030256782.3
SIO_010081: PGPEP1
subclass of: SO_0000673
so part of: PGPEP1
location: complement(join(593704..599808,601430..601662,602400..602516,607691..607743,610801..610912))
location: region:593704-610912:-1
so has part: feature:610801-610912:-1:exon
so has part: feature:607691-607743:-1:exon
so has part: feature:602400-602516:-1:exon
so has part: feature:601430-601662:-1:exon
so has part: feature:593704-599808:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:610801-610912:-1:exon

position:610801:-1
position: 610801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:607691-607743:-1:exon

position:607691:-1
position: 607691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:607743:-1
position: 607743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:602400-602516:-1:exon

position:602400:-1
position: 602400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:602516:-1
position: 602516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:601430-601662:-1:exon

position:601430:-1
position: 601430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:601662:-1
position: 601662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:593704-599808:-1:exon