Taeniopygia guttata isolate Blue55 chromosome 26, bTaeGut1.4.pri, whole genome shotgun sequence.
type: Entry
definition: Taeniopygia guttata isolate Blue55 chromosome 26, bTaeGut1.4.pri, whole genome shotgun sequence.
sequence version: NC_044238.2
sequence date: 2021-05-26
sequence: sequence
division: CON
label: NC_044238.2
type: RefSeq
SIO_000068: refseq
dblink: PRJNA558048
dblink: SAMN02981239
keyword: WGS
keyword: RefSeq
source: Taeniopygia guttata (zebra finch)
organism: Taeniopygia guttata
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Taeniopygia.
reference: 1
references: 33911273
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM012108.2.\nOn May 24, 2021 this sequence version replaced NC_044238.1.\nAssembly name: bTaeGut1.4.pri\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2021/05/04. The original whole-genome shotgun project has the\naccession RRCB00000000.2.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 09-APR-2021\nAssembly Method :: FALCON v. 5.1.1; FALCON unzip v.\n Nov2017(uc4); Purge_dups v. 1.0.1;\n Scaff10X v. 4.1.0; Bionano Solve\n BspQI/BssSI v. 3.4; Salsa2 v. 2.2.; Arrow\n polishing v. variantCaller 2.3.3; Merfin\n filtering v. 0.1; longranger align v.\n 2.2.2; freebayes polishing v. 1.3.1;\n gEVAL manual curation v. 2021-04-09; VGP\n pipeline v. 1.7\nAssembly Name :: bTaeGut1.4.pri\nDiploid :: Principal Pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 88.2x\nSequencing Technology :: PacBio RSII; 10X Genomics linked reads;\n Bionano Genomics two enzymes; Arima\n Genomics Hi-C\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Taeniopygia guttata Annotation\n Release 106\nAnnotation Version :: 106\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.6\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 6804938
topology: linear
so has quality: SO_0000987
location: 1..6804938
location: region:1-6804938:1
RO_0002162: 59729

NC_044238
type: RefSeq
SIO_000068: refseq

PRJNA558048
type: BioProject
SIO_000068: bioproject

SAMN02981239
type: BioSample
SIO_000068: biosample

1
title: Towards complete and error-free genome assemblies of all vertebrate species
author: Rhie, A.
author: McCarthy, S.A.
author: Fedrigo, O.
author: Damas, J.
author: Formenti, G.
author: Koren, S.
author: Uliano-Silva, M.
author: Chow, W.
author: Fungtammasan, A.
author: Kim, J.
author: Lee, C.
author: Ko, B.J.
author: Chaisson, M.
author: Gedman, G.L.
author: Cantin, L.J.
author: Thibaud-Nissen, F.
author: Haggerty, L.
author: Bista, I.
author: Smith, M.
author: Haase, B.
author: Mountcastle, J.
author: Winkler, S.
author: Paez, S.
author: Howard, J.
author: Vernes, S.C.
author: Lama, T.M.
author: Grutzner, F.
author: Warren, W.C.
author: Balakrishnan, C.N.
author: Burt, D.
author: George, J.M.
author: Biegler, M.T.
author: Iorns, D.
author: Digby, A.
author: Eason, D.
author: Robertson, B.
author: Edwards, T.
author: Wilkinson, M.
author: Turner, G.
author: Meyer, A.
author: Kautt, A.F.
author: Franchini, P.
author: Detrich, H.W. 3rd
author: Svardal, H.
author: Wagner, M.
author: Naylor, G.J.P.
author: Pippel, M.
author: Malinsky, M.
author: Mooney, M.
author: Simbirsky, M.
author: Hannigan, B.T.
author: Pesout, T.
author: Houck, M.
author: Misuraca, A.
author: Kingan, S.B.
author: Hall, R.
author: Kronenberg, Z.
author: Sovic, I.
author: Dunn, C.
author: Ning, Z.
author: Hastie, A.
author: Lee, J.
author: Selvaraj, S.
author: Green, R.E.
author: Putnam, N.H.
author: Gut, I.
author: Ghurye, J.
author: Garrison, E.
author: Sims, Y.
author: Collins, J.
author: Pelan, S.
author: Torrance, J.
author: Tracey, A.
author: Wood, J.
author: Dagnew, R.E.
author: Guan, D.
author: London, S.E.
author: Clayton, D.F.

33911273
type: PubMed
SIO_000068: pubmed

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6804938:1
position: 6804938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-6804938:1:source
so part of: sequence
organism: Taeniopygia guttata
mol type: genomic DNA
isolate: Blue55
chromosome: 26
sex: female
tissue type: Muscle, blood, brain
dev stage: adult
country: USA
lat lon: 36.0014 N 78.9382 W
collected by: Matt Biegler, Duke University and Rockefeller University

59729
type: Taxonomy
SIO_000068: taxonomy

LOC121471154
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121471154
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2885..10503)
location: region:2885-10503:-1
so has part: feature:2885-10503:-1:exon
subclass of: SO_0000010

121471154
type: Gene
SIO_000068: ncbigene

position:2885:-1
position: 2885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10503:-1
position: 10503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2885-10503:-1:exon

LOC121471154
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC121471154
product: CD2 antigen cytoplasmic tail-binding protein 2-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 82% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041721303.1
SIO_010081: LOC121471154
subclass of: SO_0000673
so part of: LOC121471154
location: complement(join(2885..3069,3663..3754,4804..5264,6201..6364,7762..7873,9333..9415,10064..10240,10341..10503))
location: region:2885-10503:-1
so has part: feature:10341-10503:-1:exon
so has part: feature:10064-10240:-1:exon
so has part: feature:9333-9415:-1:exon
so has part: feature:7762-7873:-1:exon
so has part: feature:6201-6364:-1:exon
so has part: feature:4804-5264:-1:exon
so has part: feature:3663-3754:-1:exon
so has part: feature:2885-3069:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10341-10503:-1:exon

position:10341:-1
position: 10341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10064-10240:-1:exon

position:10064:-1
position: 10064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10240:-1
position: 10240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9333-9415:-1:exon

position:9333:-1
position: 9333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9415:-1
position: 9415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7762-7873:-1:exon

position:7762:-1
position: 7762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7873:-1
position: 7873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6201-6364:-1:exon

position:6201:-1
position: 6201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6364:-1
position: 6364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4804-5264:-1:exon

position:4804:-1
position: 4804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5264:-1
position: 5264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3663-3754:-1:exon

position:3663:-1
position: 3663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3754:-1
position: 3754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2885-3069:-1:exon

position:3069:-1
position: 3069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121471154
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC121471154
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: CD2 antigen cytoplasmic tail-binding protein 2-like
translation: MEKNARNGPKRRKNNGRINPSGNSRGERGKGGAAAVANLRTRHFRHVPVPRCAPARGESAVLREGAAPVCDVTSAARRRTVRDVTASAGSRRRVRGASAADLHMQMSPGAANEAMSRRRVWFQDPPGEGEGPEEPKTKRRRPEGGPGSRFPALPPPDSDEEEEEEEEEELRAGGPPVEGQEPGPAPGVGEGPVPLTPFNLEEEMGEGRFDPHGHFLPLPRRETPDPWLETLEGMPIKPRPLPPPGRASPPPSPPPLPQLLRGALALLRPRETVGGALRRWGGGGGAEGEGRGEGQGARPSPPELEALVALSDALVARGVLGVLGESRERLRGRLRALGGEGRGEGQEGEEEEGEEEEEEEEEGEGEGQAAPALDMFAPPEEGEGREALPEVLWEYHWGGEGDPPTPLYGPFSSAQMQAWADQGYFRGGGGARCRRLNPPDPPGPFYDCGRVDFQLYT
SIO_010081: LOC121471154
subclass of: SO_0000673
so part of: LOC121471154
location: complement(join(2947..3069,3663..3754,4804..5264,6201..6364,7762..7873,9333..9415,10064..10240,10341..10503))
location: region:2947-10503:-1
so has part: feature:10341-10503:-1:exon
so has part: feature:10064-10240:-1:exon
so has part: feature:9333-9415:-1:exon
so has part: feature:7762-7873:-1:exon
so has part: feature:6201-6364:-1:exon
so has part: feature:4804-5264:-1:exon
so has part: feature:3663-3754:-1:exon
so has part: feature:2947-3069:-1:exon

XP_041577237.1
type: Protein
SIO_000068: ncbiprotein

position:2947:-1
position: 2947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10341-10503:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10064-10240:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9333-9415:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7762-7873:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6201-6364:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4804-5264:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3663-3754:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2947-3069:-1:exon

LOC121471138
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121471138
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 10515..>24370
location: region:10515-24370:1
so has part: feature:10515-24370:1:exon
subclass of: SO_0000010

121471138
type: Gene
SIO_000068: ncbigene

position:10515:1
position: 10515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24370:1
position: 24370
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10515-24370:1:exon

LOC121471138
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC121471138
product: histone-lysine N-methyltransferase SETD1A-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041721195.1
SIO_010081: LOC121471138
subclass of: SO_0000673
so part of: LOC121471138
location: join(10515..10770,11305..11352,12410..12565,16424..16522,18990..19260,21309..21412,22864..23066,24214..>24370)
location: region:10515-24370:1
so has part: feature:10515-10770:1:exon
so has part: feature:11305-11352:1:exon
so has part: feature:12410-12565:1:exon
so has part: feature:16424-16522:1:exon
so has part: feature:18990-19260:1:exon
so has part: feature:21309-21412:1:exon
so has part: feature:22864-23066:1:exon
so has part: feature:24214-24370:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10515-10770:1:exon

position:10770:1
position: 10770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11305-11352:1:exon

position:11305:1
position: 11305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11352:1
position: 11352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:12410-12565:1:exon

position:12410:1
position: 12410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12565:1
position: 12565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:16424-16522:1:exon

position:16424:1
position: 16424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16522:1
position: 16522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:18990-19260:1:exon

position:18990:1
position: 18990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19260:1
position: 19260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:21309-21412:1:exon

position:21309:1
position: 21309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21412:1
position: 21412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:22864-23066:1:exon

position:22864:1
position: 22864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23066:1
position: 23066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:24214-24370:1:exon

position:24214:1
position: 24214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121471138
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC121471138
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone-lysine N-methyltransferase SETD1A-like
translation: MEPEPGGDGPRTPNVPWRSYKLLLDPALRRGGQKLYRYDGVHFSLPDSGFPPAGPVQDPRPRRIWAKHRDLSLPVPKFKLDEFYVGQVPLKEVTFARLNDNIREGFLREMCRKFGEVEEVEVLLHPKTRKHLGLARVTFGSSRGARDTVRHLHNATVMGTAIHAQLDVRGQQRMKLYELIVSGSYTPQTVPTGSGKNSAESPDTPPPPADPPRRRPSAEGPFAPPPPPGGSATPQDGGGGGAGGGFGPFAPPPPPPPFGAFADGSPSPYGSRLPFPPDPFPSPRRPPEGGGGVPGGSFPSRRAPPPPPPPPPPPPPSGGSFLPF
SIO_010081: LOC121471138
subclass of: SO_0000673
so part of: LOC121471138
location: join(12428..12565,16424..16522,18990..19260,21309..21412,22864..23066,24214..>24370)
location: region:12428-24370:1
so has part: feature:12428-12565:1:exon
so has part: feature:16424-16522:1:exon
so has part: feature:18990-19260:1:exon
so has part: feature:21309-21412:1:exon
so has part: feature:22864-23066:1:exon
so has part: feature:24214-24370:1:exon

XP_041577129.1
type: Protein
SIO_000068: ncbiprotein

position:12428:1
position: 12428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12428-12565:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:16424-16522:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:18990-19260:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:21309-21412:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:22864-23066:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:24214-24370:1:exon

LOC121471139
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121471139
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 24761..>30484
location: region:24761-30484:1
so has part: feature:24761-30484:1:exon
subclass of: SO_0000010

121471139
type: Gene
SIO_000068: ncbigene

position:24761:1
position: 24761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30484:1
position: 30484
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24761-30484:1:exon

LOC121471139
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC121471139
product: histone-lysine N-methyltransferase SETD1A-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 99% coverage of the annotated genomic feature by RNAseq alignments, including 93 samples with support for all annotated introns
transcript id: XM_041721196.1
SIO_010081: LOC121471139
subclass of: SO_0000673
so part of: LOC121471139
location: join(24761..24853,26227..26850,27749..27889,28829..28916,30345..>30484)
location: region:24761-30484:1
so has part: feature:24761-24853:1:exon
so has part: feature:26227-26850:1:exon
so has part: feature:27749-27889:1:exon
so has part: feature:28829-28916:1:exon
so has part: feature:30345-30484:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:24761-24853:1:exon

position:24853:1
position: 24853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:26227-26850:1:exon

position:26227:1
position: 26227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26850:1
position: 26850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:27749-27889:1:exon

position:27749:1
position: 27749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27889:1
position: 27889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:28829-28916:1:exon

position:28829:1
position: 28829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28916:1
position: 28916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:30345-30484:1:exon

position:30345:1
position: 30345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121471139
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC121471139
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone-lysine N-methyltransferase SETD1A-like
translation: MEISSDDNSDAPHAPPPLPPSPFPEPPPPPPSFPPPPPPQPLMAVPLPPPPPRPLPDFGGSPPALLELLGRPGGRWGGVPTPLPLLSRLRAPKSAFGGGGGGGGGAPFAPPPPPHFAPPPPPRFPPPPPPFEPPTAEERPPGTDPPAPPAPPEPPGPVEGVLAALVQEMKATMQRDLNRKMVENVAFRAFDAWWERKEEQLKPFQSGRGREEAPRPKEPPPALLSLSLVDWARGGGAGLRGALRLPSFKVKRKEPSELNEGGEEKRPRPPTPPEEDEDEKEPPRAAEGPGKRRKLFRLDSEGEEASEESSSAKVGPPPILGTPPD
SIO_010081: LOC121471139
subclass of: SO_0000673
so part of: LOC121471139
location: join(26245..26850,27749..27889,28829..28916,30345..>30484)
location: region:26245-30484:1
so has part: feature:26245-26850:1:exon
so has part: feature:27749-27889:1:exon
so has part: feature:28829-28916:1:exon
so has part: feature:30345-30484:1:exon

XP_041577130.1
type: Protein
SIO_000068: ncbiprotein

position:26245:1
position: 26245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26245-26850:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:27749-27889:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:28829-28916:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:30345-30484:1:exon

LOC121471140
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121471140
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(52445..>75302)
location: region:52445-75302:-1
so has part: feature:52445-75302:-1:exon
subclass of: SO_0000010

121471140
type: Gene
SIO_000068: ncbigene

position:52445:-1
position: 52445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:75302:-1
position: 75302
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52445-75302:-1:exon

LOC121471140
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC121471140
product: histone-lysine N-methyltransferase SETD1A-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 1 Protein, and 77% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041721197.1
SIO_010081: LOC121471140
subclass of: SO_0000673
so part of: LOC121471140
location: complement(join(52445..53707,54218..54355,55512..55631,56485..56595,56666..56835,58150..59118,59815..59866,61551..61657,62604..62691,63625..63765,65504..65713,66073..66129,67413..67473,69356..69558,70777..70907,74987..>75302))
location: region:52445-75302:-1
so has part: feature:74987-75302:-1:exon
so has part: feature:70777-70907:-1:exon
so has part: feature:69356-69558:-1:exon
so has part: feature:67413-67473:-1:exon
so has part: feature:66073-66129:-1:exon
so has part: feature:65504-65713:-1:exon
so has part: feature:63625-63765:-1:exon
so has part: feature:62604-62691:-1:exon
so has part: feature:61551-61657:-1:exon
so has part: feature:59815-59866:-1:exon
so has part: feature:58150-59118:-1:exon
so has part: feature:56666-56835:-1:exon
so has part: feature:56485-56595:-1:exon
so has part: feature:55512-55631:-1:exon
so has part: feature:54218-54355:-1:exon
so has part: feature:52445-53707:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:74987-75302:-1:exon

position:74987:-1
position: 74987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:70777-70907:-1:exon

position:70777:-1
position: 70777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:70907:-1
position: 70907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:69356-69558:-1:exon

position:69356:-1
position: 69356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:69558:-1
position: 69558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:67413-67473:-1:exon

position:67413:-1
position: 67413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:67473:-1
position: 67473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:66073-66129:-1:exon

position:66073:-1
position: 66073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:66129:-1
position: 66129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:65504-65713:-1:exon

position:65504:-1
position: 65504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:65713:-1
position: 65713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:63625-63765:-1:exon

position:63625:-1
position: 63625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:63765:-1
position: 63765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:62604-62691:-1:exon

position:62604:-1
position: 62604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:62691:-1
position: 62691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:61551-61657:-1:exon

position:61551:-1
position: 61551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:61657:-1
position: 61657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:59815-59866:-1:exon

position:59815:-1
position: 59815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:59866:-1
position: 59866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:58150-59118:-1:exon

position:58150:-1
position: 58150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:59118:-1
position: 59118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:56666-56835:-1:exon

position:56666:-1
position: 56666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:56835:-1
position: 56835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:56485-56595:-1:exon

position:56485:-1
position: 56485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:56595:-1
position: 56595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:55512-55631:-1:exon

position:55512:-1
position: 55512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:55631:-1
position: 55631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:54218-54355:-1:exon

position:54218:-1
position: 54218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54355:-1
position: 54355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:52445-53707:-1:exon

position:53707:-1
position: 53707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121471140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC121471140
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone-lysine N-methyltransferase SETD1A-like
translation: FGVFFGVFFGVFGSQLDEFYVGQVPLKEVTFARLNDNIREGFLREMCRKFGEVEEVEVLLHPKTRKHLGLARVTFGSSRGARDTVRHLHNATVMGTAIHAQLDVRGQQRMKLYELIVSGSYTPQTVPTGSGKNSAESPDTVRFWGKFGGPPPPADPPPRRPSAEGPFAPPPPPGGSATPQDGGGGGAGGGFGPFAPPPPPPPFGAFADGSPSPYGSSLDSRIEALLKEQRSHFFPAPTSSGEDMEISSDDNSDAPHPPTAEERPPGTDPPAPPAPPEPPGPVEGVLAALVQEMKATMQRDLNRKMVENVAFRAFDAWWERKEEQLKPFQSGRGREEAPRPKEPPPALLSLSLVDWARGGGAGLRGALRLPSFKVKRKEPSELNEGGEEKRPRPPTPPEEDEDAEKESPRAAEGPGKRRKLFRLDSEGEEASEESSSAKDEAEEPPEPPRPPSPKPAPPPPPPRPSSPIPLLPPPKKRRKAEEPPPAPPQPPPPSPPSPPSPPKPPTPLPRRREPPARPPAPAPRLVANLPADHASLVKSCADTSTNATNATDGGPARRPPPRRPPRAAAEHLGASSLLELSRGAHSAPRRSPQRGVGGDLAVLAAIALTDDNDTDAPPVLLEHNYAKTPPAAPAGHAPCLEEVLEAPEEVVAELPPVGGTDSDAAVPSAVPPRRKRHRPPPPSSSSSSSSSSDSDSDSDSSEGGARRWLRPRGGGTAPVAPVAFTPRSEFEQMTILYDIWSAGLDAEDARFLRVTYERLLQQDGAAHWLNDTHWVPHTVTRAGSPRRRRRWPESREHRTGSARSEGYYPISRREKARYLRPCPAPRPDPDAPDAQGPNRVLSERRSEQRRLLSAIGAAALPDSDLLKLNQLKFRKKRLRFGRSRIHEWGLFAMEPIAADEMVIEYVGQNIRQVVADMREKRYAQEGIGSSYLFRVDHDTIIDATKCGNLARFINHCCTPNCYAKVITIEAQKKIVIYSKQPIGVNEEITYDYKFPIEDTKIPCLCRTESCRGTLN
SIO_010081: LOC121471140
subclass of: SO_0000673
so part of: LOC121471140
location: complement(join(53534..53707,54218..54355,55512..55631,56485..56595,56666..56835,58150..59118,59815..59866,61551..61657,62604..62691,63625..63765,65504..65713,66073..66129,67413..67473,69356..69558,70777..70907,74987..>75302))
location: region:53534-75302:-1
so has part: feature:74987-75302:-1:exon
so has part: feature:70777-70907:-1:exon
so has part: feature:69356-69558:-1:exon
so has part: feature:67413-67473:-1:exon
so has part: feature:66073-66129:-1:exon
so has part: feature:65504-65713:-1:exon
so has part: feature:63625-63765:-1:exon
so has part: feature:62604-62691:-1:exon
so has part: feature:61551-61657:-1:exon
so has part: feature:59815-59866:-1:exon
so has part: feature:58150-59118:-1:exon
so has part: feature:56666-56835:-1:exon
so has part: feature:56485-56595:-1:exon
so has part: feature:55512-55631:-1:exon
so has part: feature:54218-54355:-1:exon
so has part: feature:53534-53707:-1:exon

XP_041577131.1
type: Protein
SIO_000068: ncbiprotein

position:53534:-1
position: 53534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74987-75302:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:70777-70907:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:69356-69558:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:67413-67473:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:66073-66129:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:65504-65713:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:63625-63765:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:62604-62691:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:61551-61657:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:59815-59866:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:58150-59118:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:56666-56835:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:56485-56595:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:55512-55631:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:54218-54355:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:53534-53707:-1:exon

MAGI3
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: MAGI3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(85424..139863)
location: region:85424-139863:-1
so has part: feature:85424-139863:-1:exon
subclass of: SO_0000010

100231301
type: Gene
SIO_000068: ncbigene

position:85424:-1
position: 85424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:139863:-1
position: 139863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:85424-139863:-1:exon

MAGI3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: MAGI3
product: membrane associated guanylate kinase, WW and PDZ domain containing 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 4 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_030291737.3
SIO_010081: MAGI3
subclass of: SO_0000673
so part of: MAGI3
location: complement(join(85424..88447,90206..90344,92495..92638,93196..93316,93405..93498,96916..97101,98832..99017,99702..99894,101552..101643,102139..102292,104031..104062,105091..105690,107071..107259,107847..107941,108953..109010,110368..110447,111222..111396,112675..112884,114312..114431,115840..115956,139471..139862))
location: region:85424-139862:-1
so has part: feature:139471-139862:-1:exon
so has part: feature:115840-115956:-1:exon
so has part: feature:114312-114431:-1:exon
so has part: feature:112675-112884:-1:exon
so has part: feature:111222-111396:-1:exon
so has part: feature:110368-110447:-1:exon
so has part: feature:108953-109010:-1:exon
so has part: feature:107847-107941:-1:exon
so has part: feature:107071-107259:-1:exon
so has part: feature:105091-105690:-1:exon
so has part: feature:104031-104062:-1:exon
so has part: feature:102139-102292:-1:exon
so has part: feature:101552-101643:-1:exon
so has part: feature:99702-99894:-1:exon
so has part: feature:98832-99017:-1:exon
so has part: feature:96916-97101:-1:exon
so has part: feature:93405-93498:-1:exon
so has part: feature:93196-93316:-1:exon
so has part: feature:92495-92638:-1:exon
so has part: feature:90206-90344:-1:exon
so has part: feature:85424-88447:-1:exon

position:139862:-1
position: 139862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:139471-139862:-1:exon

position:139471:-1
position: 139471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:115840-115956:-1:exon

position:115840:-1
position: 115840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:115956:-1
position: 115956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:114312-114431:-1:exon

position:114312:-1
position: 114312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:114431:-1
position: 114431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:112675-112884:-1:exon

position:112675:-1
position: 112675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:112884:-1
position: 112884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:111222-111396:-1:exon

position:111222:-1
position: 111222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:111396:-1
position: 111396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:110368-110447:-1:exon

position:110368:-1
position: 110368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:110447:-1
position: 110447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:108953-109010:-1:exon

position:108953:-1
position: 108953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:109010:-1
position: 109010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:107847-107941:-1:exon

position:107847:-1
position: 107847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:107941:-1
position: 107941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:107071-107259:-1:exon

position:107071:-1
position: 107071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:107259:-1
position: 107259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:105091-105690:-1:exon

position:105091:-1
position: 105091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:105690:-1
position: 105690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:104031-104062:-1:exon

position:104031:-1
position: 104031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:104062:-1
position: 104062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:102139-102292:-1:exon

position:102139:-1
position: 102139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:102292:-1
position: 102292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:101552-101643:-1:exon

position:101552:-1
position: 101552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:101643:-1
position: 101643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:99702-99894:-1:exon

position:99702:-1
position: 99702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:99894:-1
position: 99894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:98832-99017:-1:exon

position:98832:-1
position: 98832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:99017:-1
position: 99017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:96916-97101:-1:exon

position:96916:-1
position: 96916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:97101:-1
position: 97101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:93405-93498:-1:exon

position:93405:-1
position: 93405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:93498:-1
position: 93498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:93196-93316:-1:exon

position:93196:-1
position: 93196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:93316:-1
position: 93316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:92495-92638:-1:exon

position:92495:-1
position: 92495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:92638:-1
position: 92638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:90206-90344:-1:exon

position:90206:-1
position: 90206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:90344:-1
position: 90344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:85424-88447:-1:exon

position:88447:-1
position: 88447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MAGI3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: MAGI3
product: membrane associated guanylate kinase, WW and PDZ domain containing 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 4 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030291738.3
SIO_010081: MAGI3
subclass of: SO_0000673
so part of: MAGI3
location: complement(join(85424..88447,90206..90344,92495..92638,93196..93316,93405..93498,96916..97101,98832..99017,99702..99894,101552..101643,102139..102292,104031..104062,105091..105690,107071..107259,107847..107941,108953..109010,110368..110447,111222..111396,112675..112884,114312..114431,115840..115956,136162..139342))
location: region:85424-139342:-1
so has part: feature:136162-139342:-1:exon
so has part: feature:115840-115956:-1:exon
so has part: feature:114312-114431:-1:exon
so has part: feature:112675-112884:-1:exon
so has part: feature:111222-111396:-1:exon
so has part: feature:110368-110447:-1:exon
so has part: feature:108953-109010:-1:exon
so has part: feature:107847-107941:-1:exon
so has part: feature:107071-107259:-1:exon
so has part: feature:105091-105690:-1:exon
so has part: feature:104031-104062:-1:exon
so has part: feature:102139-102292:-1:exon
so has part: feature:101552-101643:-1:exon
so has part: feature:99702-99894:-1:exon
so has part: feature:98832-99017:-1:exon
so has part: feature:96916-97101:-1:exon
so has part: feature:93405-93498:-1:exon
so has part: feature:93196-93316:-1:exon
so has part: feature:92495-92638:-1:exon
so has part: feature:90206-90344:-1:exon
so has part: feature:85424-88447:-1:exon

position:139342:-1
position: 139342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:136162-139342:-1:exon

position:136162:-1
position: 136162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:115840-115956:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:114312-114431:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:112675-112884:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:111222-111396:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:110368-110447:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:108953-109010:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:107847-107941:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:107071-107259:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:105091-105690:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:104031-104062:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:102139-102292:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:101552-101643:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:99702-99894:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:98832-99017:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:96916-97101:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:93405-93498:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:93196-93316:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:92495-92638:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:90206-90344:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:85424-88447:-1:exon

MAGI3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: MAGI3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3 isoform X1
translation: MSKTLRKKRHWLSKVQECVVSWGGPAGPDPDLLRGGAERGEFPYLAGRLPAGGEGSPGPALLSGKAPAPGDVLLEVNGTPVSGLTHRDTLAVVRHFREPVRLKTVRPGKVINKDLRHYLSLQFQKGSIDHKLQQVIRDNLYLRTIPCTTRAPRDGEVPGVDYNFIPVEQFKALEESGALLESGTYDGNFYGTPKPPAEPSPFQPDPVDQVLFDNDFDTESQRKRTTSVSKMQRMESSLPEEEEEEEKEAVNGSGGIENKEKHSDSPDWMKPVPSYNQTSSNMDFRNYLSRDETLEPLPKNWEMAYTDTGMIYFIDHNTKTTTWLDPRLCKKAKAPEDCEDGELPYGWEKIEDPQYGTYYVDHINQKTQFENPVLEAKRKKQLGQTDAGPSKSGLGRSVFTRDPSQLTGALIRTSLKKSTMGFGFTIIGGDRPDEFLQVKNVLKDGPAAQDGRIAPGDVIVDINGSCVLGHTHADVVQMFQLIPINQYVNMTLCRGYPLPDDSEDPVVDIVTATPVINGLPLAKGDTSVSSQDLVAATVGLDQNGKVLVNGRLNGPSVDSAEQRVSFASSGGSQPELVTIPLVKGPKGFGFAIADSPTGQKVKMILDSQWCQGLQKGDVIKEICHQNVQSLTHLQVVEVLKQFPVGAEVPLLILRGGPPSPTKAAKGKDKQDSSGSLEAVSDTIPQPMPFPPSAVRPGSPKLDPSEVYLKSKTIYEDKPPNTRDLDVFLRKQESGFGFRVLGGDGPDQPIYIGAIIPLGAAEKDGRLRAADELMCIDGVPVKGKSHKQVLDLMTSAARNGQVLLTVRRKIFFSGEKQAEEEEPQPVLAQNGSPRLNRVDFANQPCPEVYDVRLQRKENEGFGFVILTSKNKPPPGVIPHKIGRVIEGSPADQCGKLKVGDRISAVNSQSIVELSHDSIVQLIKDAGNVVTLTVVAEEEQRGPPSGTNSARQSPAPQHRPLGLALINPDRGATEGEAGKEVSNSYRLSWPEHKHMAQLDAASGVGSRHSQNAGCFPVELERGPRGFGFSLRGGKEYNMGLFILRLAEDGPAVKDGRVHVGDQIVEINGEPTQGITHTRAIELIQAGGNKVLLLLRPGTGLIPDHSDWDSYNPASSNVIYEEQSPLLSSSSHSASPSEVCYLAVPGEALTRVQLSEELEQAENTVPDKLSTLTENLCERKPQSSPQRAKNRWECPSSPGFGITKGSSEAGTRTGRPASPAKSGAAEGYPQMGFHNPRKGDSEKSNLSHKSDSSRSESKTTGKEMKNSDKKESSHGNRGRSASPQRHLGKPGSTETVGRIQTSRSVEQLKGGSDKPEVTRKEMKQKTLGKTEGCSADQHYLVFGGDNLLFRDSRRNASEDDLLTKSNSRDVGSSRFKTSSLSNIPLLSMEKKRRAEAQEVLTLNRHHGERHMELPNETKDGTSQLERSSPVRKTLVTPGPWRVPSGCKGTPVPGKQL
SIO_010081: MAGI3
subclass of: SO_0000673
so part of: MAGI3
location: complement(join(87393..88447,90206..90344,92495..92638,93196..93316,93405..93498,96916..97101,98832..99017,99702..99894,101552..101643,102139..102292,104031..104062,105091..105690,107071..107259,107847..107941,108953..109010,110368..110447,111222..111396,112675..112884,114312..114431,115840..115956,139471..139792))
location: region:87393-139792:-1
so has part: feature:139471-139792:-1:exon
so has part: feature:115840-115956:-1:exon
so has part: feature:114312-114431:-1:exon
so has part: feature:112675-112884:-1:exon
so has part: feature:111222-111396:-1:exon
so has part: feature:110368-110447:-1:exon
so has part: feature:108953-109010:-1:exon
so has part: feature:107847-107941:-1:exon
so has part: feature:107071-107259:-1:exon
so has part: feature:105091-105690:-1:exon
so has part: feature:104031-104062:-1:exon
so has part: feature:102139-102292:-1:exon
so has part: feature:101552-101643:-1:exon
so has part: feature:99702-99894:-1:exon
so has part: feature:98832-99017:-1:exon
so has part: feature:96916-97101:-1:exon
so has part: feature:93405-93498:-1:exon
so has part: feature:93196-93316:-1:exon
so has part: feature:92495-92638:-1:exon
so has part: feature:90206-90344:-1:exon
so has part: feature:87393-88447:-1:exon

XP_030147597.1
type: Protein
SIO_000068: ncbiprotein

position:87393:-1
position: 87393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:139792:-1
position: 139792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:139471-139792:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:115840-115956:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:114312-114431:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:112675-112884:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:111222-111396:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:110368-110447:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:108953-109010:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:107847-107941:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:107071-107259:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:105091-105690:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:104031-104062:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:102139-102292:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:101552-101643:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:99702-99894:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:98832-99017:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:96916-97101:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:93405-93498:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:93196-93316:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:92495-92638:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:90206-90344:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:87393-88447:-1:exon

MAGI3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: MAGI3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3 isoform X2
translation: MFRMRMVSGKVINKDLRHYLSLQFQKGSIDHKLQQVIRDNLYLRTIPCTTRAPRDGEVPGVDYNFIPVEQFKALEESGALLESGTYDGNFYGTPKPPAEPSPFQPDPVDQVLFDNDFDTESQRKRTTSVSKMQRMESSLPEEEEEEEKEAVNGSGGIENKEKHSDSPDWMKPVPSYNQTSSNMDFRNYLSRDETLEPLPKNWEMAYTDTGMIYFIDHNTKTTTWLDPRLCKKAKAPEDCEDGELPYGWEKIEDPQYGTYYVDHINQKTQFENPVLEAKRKKQLGQTDAGPSKSGLGRSVFTRDPSQLTGALIRTSLKKSTMGFGFTIIGGDRPDEFLQVKNVLKDGPAAQDGRIAPGDVIVDINGSCVLGHTHADVVQMFQLIPINQYVNMTLCRGYPLPDDSEDPVVDIVTATPVINGLPLAKGDTSVSSQDLVAATVGLDQNGKVLVNGRLNGPSVDSAEQRVSFASSGGSQPELVTIPLVKGPKGFGFAIADSPTGQKVKMILDSQWCQGLQKGDVIKEICHQNVQSLTHLQVVEVLKQFPVGAEVPLLILRGGPPSPTKAAKGKDKQDSSGSLEAVSDTIPQPMPFPPSAVRPGSPKLDPSEVYLKSKTIYEDKPPNTRDLDVFLRKQESGFGFRVLGGDGPDQPIYIGAIIPLGAAEKDGRLRAADELMCIDGVPVKGKSHKQVLDLMTSAARNGQVLLTVRRKIFFSGEKQAEEEEPQPVLAQNGSPRLNRVDFANQPCPEVYDVRLQRKENEGFGFVILTSKNKPPPGVIPHKIGRVIEGSPADQCGKLKVGDRISAVNSQSIVELSHDSIVQLIKDAGNVVTLTVVAEEEQRGPPSGTNSARQSPAPQHRPLGLALINPDRGATEGEAGKEVSNSYRLSWPEHKHMAQLDAASGVGSRHSQNAGCFPVELERGPRGFGFSLRGGKEYNMGLFILRLAEDGPAVKDGRVHVGDQIVEINGEPTQGITHTRAIELIQAGGNKVLLLLRPGTGLIPDHSDWDSYNPASSNVIYEEQSPLLSSSSHSASPSEVCYLAVPGEALTRVQLSEELEQAENTVPDKLSTLTENLCERKPQSSPQRAKNRWECPSSPGFGITKGSSEAGTRTGRPASPAKSGAAEGYPQMGFHNPRKGDSEKSNLSHKSDSSRSESKTTGKEMKNSDKKESSHGNRGRSASPQRHLGKPGSTETVGRIQTSRSVEQLKGGSDKPEVTRKEMKQKTLGKTEGCSADQHYLVFGGDNLLFRDSRRNASEDDLLTKSNSRDVGSSRFKTSSLSNIPLLSMEKKRRAEAQEVLTLNRHHGERHMELPNETKDGTSQLERSSPVRKTLVTPGPWRVPSGCKGTPVPGKQL
SIO_010081: MAGI3
subclass of: SO_0000673
so part of: MAGI3
location: complement(join(87393..88447,90206..90344,92495..92638,93196..93316,93405..93498,96916..97101,98832..99017,99702..99894,101552..101643,102139..102292,104031..104062,105091..105690,107071..107259,107847..107941,108953..109010,110368..110447,111222..111396,112675..112884,114312..114431,115840..115956,136162..136186))
location: region:87393-136186:-1
so has part: feature:136162-136186:-1:exon
so has part: feature:115840-115956:-1:exon
so has part: feature:114312-114431:-1:exon
so has part: feature:112675-112884:-1:exon
so has part: feature:111222-111396:-1:exon
so has part: feature:110368-110447:-1:exon
so has part: feature:108953-109010:-1:exon
so has part: feature:107847-107941:-1:exon
so has part: feature:107071-107259:-1:exon
so has part: feature:105091-105690:-1:exon
so has part: feature:104031-104062:-1:exon
so has part: feature:102139-102292:-1:exon
so has part: feature:101552-101643:-1:exon
so has part: feature:99702-99894:-1:exon
so has part: feature:98832-99017:-1:exon
so has part: feature:96916-97101:-1:exon
so has part: feature:93405-93498:-1:exon
so has part: feature:93196-93316:-1:exon
so has part: feature:92495-92638:-1:exon
so has part: feature:90206-90344:-1:exon
so has part: feature:87393-88447:-1:exon

XP_030147598.1
type: Protein
SIO_000068: ncbiprotein

position:136186:-1
position: 136186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:136162-136186:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:115840-115956:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:114312-114431:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:112675-112884:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:111222-111396:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:110368-110447:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:108953-109010:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:107847-107941:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:107071-107259:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:105091-105690:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:104031-104062:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:102139-102292:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:101552-101643:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:99702-99894:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:98832-99017:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:96916-97101:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:93405-93498:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:93196-93316:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:92495-92638:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:90206-90344:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:87393-88447:-1:exon

MAGI3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: MAGI3
product: membrane associated guanylate kinase, WW and PDZ domain containing 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 64 samples with support for all annotated introns
transcript id: XM_012571039.3
SIO_010081: MAGI3
subclass of: SO_0000673
so part of: MAGI3
location: complement(join(88310..88447,88860..88949,90206..90344,92495..92638,93196..93316,93405..93498,96916..97101,98832..99017,99702..99894,101552..101643,102139..102292,104031..104062,105091..105690,107071..107259,107847..107941,108953..109010,110368..110447,111222..111396,112675..112884,114312..114431,115840..115956,139471..139863))
location: region:88310-139863:-1
so has part: feature:139471-139863:-1:exon
so has part: feature:115840-115956:-1:exon
so has part: feature:114312-114431:-1:exon
so has part: feature:112675-112884:-1:exon
so has part: feature:111222-111396:-1:exon
so has part: feature:110368-110447:-1:exon
so has part: feature:108953-109010:-1:exon
so has part: feature:107847-107941:-1:exon
so has part: feature:107071-107259:-1:exon
so has part: feature:105091-105690:-1:exon
so has part: feature:104031-104062:-1:exon
so has part: feature:102139-102292:-1:exon
so has part: feature:101552-101643:-1:exon
so has part: feature:99702-99894:-1:exon
so has part: feature:98832-99017:-1:exon
so has part: feature:96916-97101:-1:exon
so has part: feature:93405-93498:-1:exon
so has part: feature:93196-93316:-1:exon
so has part: feature:92495-92638:-1:exon
so has part: feature:90206-90344:-1:exon
so has part: feature:88860-88949:-1:exon
so has part: feature:88310-88447:-1:exon

position:88310:-1
position: 88310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:139471-139863:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:115840-115956:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:114312-114431:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:112675-112884:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:111222-111396:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:110368-110447:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:108953-109010:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:107847-107941:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:107071-107259:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:105091-105690:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:104031-104062:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:102139-102292:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:101552-101643:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:99702-99894:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:98832-99017:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:96916-97101:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:93405-93498:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:93196-93316:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:92495-92638:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:90206-90344:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:88860-88949:-1:exon

position:88860:-1
position: 88860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:88949:-1
position: 88949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:88310-88447:-1:exon

MAGI3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: MAGI3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3 isoform X4
translation: MSKTLRKKRHWLSKVQECVVSWGGPAGPDPDLLRGGAERGEFPYLAGRLPAGGEGSPGPALLSGKAPAPGDVLLEVNGTPVSGLTHRDTLAVVRHFREPVRLKTVRPGKVINKDLRHYLSLQFQKGSIDHKLQQVIRDNLYLRTIPCTTRAPRDGEVPGVDYNFIPVEQFKALEESGALLESGTYDGNFYGTPKPPAEPSPFQPDPVDQVLFDNDFDTESQRKRTTSVSKMQRMESSLPEEEEEEEKEAVNGSGGIENKEKHSDSPDWMKPVPSYNQTSSNMDFRNYLSRDETLEPLPKNWEMAYTDTGMIYFIDHNTKTTTWLDPRLCKKAKAPEDCEDGELPYGWEKIEDPQYGTYYVDHINQKTQFENPVLEAKRKKQLGQTDAGPSKSGLGRSVFTRDPSQLTGALIRTSLKKSTMGFGFTIIGGDRPDEFLQVKNVLKDGPAAQDGRIAPGDVIVDINGSCVLGHTHADVVQMFQLIPINQYVNMTLCRGYPLPDDSEDPVVDIVTATPVINGLPLAKGDTSVSSQDLVAATVGLDQNGKVLVNGRLNGPSVDSAEQRVSFASSGGSQPELVTIPLVKGPKGFGFAIADSPTGQKVKMILDSQWCQGLQKGDVIKEICHQNVQSLTHLQVVEVLKQFPVGAEVPLLILRGGPPSPTKAAKGKDKQDSSGSLEAVSDTIPQPMPFPPSAVRPGSPKLDPSEVYLKSKTIYEDKPPNTRDLDVFLRKQESGFGFRVLGGDGPDQPIYIGAIIPLGAAEKDGRLRAADELMCIDGVPVKGKSHKQVLDLMTSAARNGQVLLTVRRKIFFSGEKQAEEEEPQPVLAQNGSPRLNRVDFANQPCPEVYDVRLQRKENEGFGFVILTSKNKPPPGVIPHKIGRVIEGSPADQCGKLKVGDRISAVNSQSIVELSHDSIVQLIKDAGNVVTLTVVAEEEQRGPPSGTNSARQSPAPQHRPLGLALINPDRGATEGEAGKEVSNSYRLSWPEHKHMAQLDAASGVGSRHSQNAGCFPVELERGPRGFGFSLRGGKEYNMGLFILRLAEDGPAVKDGRVHVGDQIVEINGEPTQGITHTRAIELIQAGGNKVLLLLRPGTGLIPDHSLAPSSLCPYVKPEQH
SIO_010081: MAGI3
subclass of: SO_0000673
so part of: MAGI3
location: complement(join(88900..88949,90206..90344,92495..92638,93196..93316,93405..93498,96916..97101,98832..99017,99702..99894,101552..101643,102139..102292,104031..104062,105091..105690,107071..107259,107847..107941,108953..109010,110368..110447,111222..111396,112675..112884,114312..114431,115840..115956,139471..139792))
location: region:88900-139792:-1
so has part: feature:139471-139792:-1:exon
so has part: feature:115840-115956:-1:exon
so has part: feature:114312-114431:-1:exon
so has part: feature:112675-112884:-1:exon
so has part: feature:111222-111396:-1:exon
so has part: feature:110368-110447:-1:exon
so has part: feature:108953-109010:-1:exon
so has part: feature:107847-107941:-1:exon
so has part: feature:107071-107259:-1:exon
so has part: feature:105091-105690:-1:exon
so has part: feature:104031-104062:-1:exon
so has part: feature:102139-102292:-1:exon
so has part: feature:101552-101643:-1:exon
so has part: feature:99702-99894:-1:exon
so has part: feature:98832-99017:-1:exon
so has part: feature:96916-97101:-1:exon
so has part: feature:93405-93498:-1:exon
so has part: feature:93196-93316:-1:exon
so has part: feature:92495-92638:-1:exon
so has part: feature:90206-90344:-1:exon
so has part: feature:88900-88949:-1:exon

XP_012426493.1
type: Protein
SIO_000068: ncbiprotein

position:88900:-1
position: 88900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:139471-139792:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:115840-115956:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:114312-114431:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:112675-112884:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:111222-111396:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:110368-110447:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:108953-109010:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:107847-107941:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:107071-107259:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:105091-105690:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:104031-104062:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:102139-102292:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:101552-101643:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:99702-99894:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:98832-99017:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:96916-97101:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:93405-93498:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:93196-93316:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:92495-92638:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:90206-90344:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:88900-88949:-1:exon

MAGI3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: MAGI3
product: membrane associated guanylate kinase, WW and PDZ domain containing 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 64 samples with support for all annotated introns
transcript id: XM_041721219.1
SIO_010081: MAGI3
subclass of: SO_0000673
so part of: MAGI3
location: complement(join(90047..90344,92495..92638,93196..93316,93405..93498,96916..97101,98832..99017,99702..99894,101552..101643,102139..102292,104031..104062,105091..105690,107071..107259,107847..107941,108953..109010,110368..110447,111222..111396,112675..112884,114312..114431,115840..115956,139471..139863))
location: region:90047-139863:-1
so has part: feature:139471-139863:-1:exon
so has part: feature:115840-115956:-1:exon
so has part: feature:114312-114431:-1:exon
so has part: feature:112675-112884:-1:exon
so has part: feature:111222-111396:-1:exon
so has part: feature:110368-110447:-1:exon
so has part: feature:108953-109010:-1:exon
so has part: feature:107847-107941:-1:exon
so has part: feature:107071-107259:-1:exon
so has part: feature:105091-105690:-1:exon
so has part: feature:104031-104062:-1:exon
so has part: feature:102139-102292:-1:exon
so has part: feature:101552-101643:-1:exon
so has part: feature:99702-99894:-1:exon
so has part: feature:98832-99017:-1:exon
so has part: feature:96916-97101:-1:exon
so has part: feature:93405-93498:-1:exon
so has part: feature:93196-93316:-1:exon
so has part: feature:92495-92638:-1:exon
so has part: feature:90047-90344:-1:exon

position:90047:-1
position: 90047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:139471-139863:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:115840-115956:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:114312-114431:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:112675-112884:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:111222-111396:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:110368-110447:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:108953-109010:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:107847-107941:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:107071-107259:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:105091-105690:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:104031-104062:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:102139-102292:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:101552-101643:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:99702-99894:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:98832-99017:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:96916-97101:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:93405-93498:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:93196-93316:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:92495-92638:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:90047-90344:-1:exon

MAGI3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: MAGI3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3 isoform X3
translation: MSKTLRKKRHWLSKVQECVVSWGGPAGPDPDLLRGGAERGEFPYLAGRLPAGGEGSPGPALLSGKAPAPGDVLLEVNGTPVSGLTHRDTLAVVRHFREPVRLKTVRPGKVINKDLRHYLSLQFQKGSIDHKLQQVIRDNLYLRTIPCTTRAPRDGEVPGVDYNFIPVEQFKALEESGALLESGTYDGNFYGTPKPPAEPSPFQPDPVDQVLFDNDFDTESQRKRTTSVSKMQRMESSLPEEEEEEEKEAVNGSGGIENKEKHSDSPDWMKPVPSYNQTSSNMDFRNYLSRDETLEPLPKNWEMAYTDTGMIYFIDHNTKTTTWLDPRLCKKAKAPEDCEDGELPYGWEKIEDPQYGTYYVDHINQKTQFENPVLEAKRKKQLGQTDAGPSKSGLGRSVFTRDPSQLTGALIRTSLKKSTMGFGFTIIGGDRPDEFLQVKNVLKDGPAAQDGRIAPGDVIVDINGSCVLGHTHADVVQMFQLIPINQYVNMTLCRGYPLPDDSEDPVVDIVTATPVINGLPLAKGDTSVSSQDLVAATVGLDQNGKVLVNGRLNGPSVDSAEQRVSFASSGGSQPELVTIPLVKGPKGFGFAIADSPTGQKVKMILDSQWCQGLQKGDVIKEICHQNVQSLTHLQVVEVLKQFPVGAEVPLLILRGGPPSPTKAAKGKDKQDSSGSLEAVSDTIPQPMPFPPSAVRPGSPKLDPSEVYLKSKTIYEDKPPNTRDLDVFLRKQESGFGFRVLGGDGPDQPIYIGAIIPLGAAEKDGRLRAADELMCIDGVPVKGKSHKQVLDLMTSAARNGQVLLTVRRKIFFSGEKQAEEEEPQPVLAQNGSPRLNRVDFANQPCPEVYDVRLQRKENEGFGFVILTSKNKPPPGVIPHKIGRVIEGSPADQCGKLKVGDRISAVNSQSIVELSHDSIVQLIKDAGNVVTLTVVAEEEQRGPPSGTNSARQSPAPQHRPLGLALINPDRGATEGEAGKEVSNSYRLSWPEHKHMAQLDAASGVGSRHSQNAGCFPVELERGPRGFGFSLRGGKEYNMGLFILRLAEDGPAVKDGRVHVGDQIVEINGEPTQGITHTRAIELIQAGGNKVLLLLRPGTGLIPDHSTLSQGLFGVEAARQGSKVV
SIO_010081: MAGI3
subclass of: SO_0000673
so part of: MAGI3
location: complement(join(90144..90344,92495..92638,93196..93316,93405..93498,96916..97101,98832..99017,99702..99894,101552..101643,102139..102292,104031..104062,105091..105690,107071..107259,107847..107941,108953..109010,110368..110447,111222..111396,112675..112884,114312..114431,115840..115956,139471..139792))
location: region:90144-139792:-1
so has part: feature:139471-139792:-1:exon
so has part: feature:115840-115956:-1:exon
so has part: feature:114312-114431:-1:exon
so has part: feature:112675-112884:-1:exon
so has part: feature:111222-111396:-1:exon
so has part: feature:110368-110447:-1:exon
so has part: feature:108953-109010:-1:exon
so has part: feature:107847-107941:-1:exon
so has part: feature:107071-107259:-1:exon
so has part: feature:105091-105690:-1:exon
so has part: feature:104031-104062:-1:exon
so has part: feature:102139-102292:-1:exon
so has part: feature:101552-101643:-1:exon
so has part: feature:99702-99894:-1:exon
so has part: feature:98832-99017:-1:exon
so has part: feature:96916-97101:-1:exon
so has part: feature:93405-93498:-1:exon
so has part: feature:93196-93316:-1:exon
so has part: feature:92495-92638:-1:exon
so has part: feature:90144-90344:-1:exon

XP_041577153.1
type: Protein
SIO_000068: ncbiprotein

position:90144:-1
position: 90144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:139471-139792:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:115840-115956:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:114312-114431:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:112675-112884:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:111222-111396:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:110368-110447:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:108953-109010:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:107847-107941:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:107071-107259:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:105091-105690:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:104031-104062:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:102139-102292:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:101552-101643:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:99702-99894:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:98832-99017:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:96916-97101:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:93405-93498:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:93196-93316:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:92495-92638:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:90144-90344:-1:exon

LRIG2
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LRIG2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(162365..186797)
location: region:162365-186797:-1
so has part: feature:162365-186797:-1:exon
subclass of: SO_0000010

100224664
type: Gene
SIO_000068: ncbigene

position:162365:-1
position: 162365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:186797:-1
position: 186797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:162365-186797:-1:exon

LRIG2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LRIG2
product: leucine rich repeats and immunoglobulin like domains 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
transcript id: XM_030291740.3
SIO_010081: LRIG2
subclass of: SO_0000673
so part of: LRIG2
location: complement(join(162365..165422,166307..166588,167473..167622,168097..168546,169787..170068,171089..171409,172652..172815,174288..174356,174496..174567,175414..175494,178107..178250,178484..178627,179350..179493,179624..179767,180293..180427,180923..180997,181484..181555,186604..186797))
location: region:162365-186797:-1
so has part: feature:186604-186797:-1:exon
so has part: feature:181484-181555:-1:exon
so has part: feature:180923-180997:-1:exon
so has part: feature:180293-180427:-1:exon
so has part: feature:179624-179767:-1:exon
so has part: feature:179350-179493:-1:exon
so has part: feature:178484-178627:-1:exon
so has part: feature:178107-178250:-1:exon
so has part: feature:175414-175494:-1:exon
so has part: feature:174496-174567:-1:exon
so has part: feature:174288-174356:-1:exon
so has part: feature:172652-172815:-1:exon
so has part: feature:171089-171409:-1:exon
so has part: feature:169787-170068:-1:exon
so has part: feature:168097-168546:-1:exon
so has part: feature:167473-167622:-1:exon
so has part: feature:166307-166588:-1:exon
so has part: feature:162365-165422:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:186604-186797:-1:exon

position:186604:-1
position: 186604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:181484-181555:-1:exon

position:181484:-1
position: 181484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:181555:-1
position: 181555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:180923-180997:-1:exon

position:180923:-1
position: 180923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:180997:-1
position: 180997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:180293-180427:-1:exon

position:180293:-1
position: 180293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:180427:-1
position: 180427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:179624-179767:-1:exon

position:179624:-1
position: 179624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:179767:-1
position: 179767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:179350-179493:-1:exon

position:179350:-1
position: 179350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:179493:-1
position: 179493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:178484-178627:-1:exon

position:178484:-1
position: 178484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:178627:-1
position: 178627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:178107-178250:-1:exon

position:178107:-1
position: 178107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:178250:-1
position: 178250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:175414-175494:-1:exon

position:175414:-1
position: 175414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:175494:-1
position: 175494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:174496-174567:-1:exon

position:174496:-1
position: 174496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:174567:-1
position: 174567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:174288-174356:-1:exon

position:174288:-1
position: 174288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:174356:-1
position: 174356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:172652-172815:-1:exon

position:172652:-1
position: 172652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:172815:-1
position: 172815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:171089-171409:-1:exon

position:171089:-1
position: 171089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:171409:-1
position: 171409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:169787-170068:-1:exon

position:169787:-1
position: 169787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:170068:-1
position: 170068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:168097-168546:-1:exon

position:168097:-1
position: 168097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:168546:-1
position: 168546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:167473-167622:-1:exon

position:167473:-1
position: 167473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:167622:-1
position: 167622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:166307-166588:-1:exon

position:166307:-1
position: 166307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:166588:-1
position: 166588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:162365-165422:-1:exon

position:165422:-1
position: 165422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LRIG2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LRIG2
product: leucine rich repeats and immunoglobulin like domains 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_030291739.3
SIO_010081: LRIG2
subclass of: SO_0000673
so part of: LRIG2
location: complement(join(162365..165422,166307..166588,167473..167622,168097..168546,169787..170068,171089..171409,172652..172815,174288..174356,174496..174567,175414..175494,178107..178250,178484..178627,179350..179493,179624..179767,180293..180427,180923..180997,181484..181555,182693..186722))
location: region:162365-186722:-1
so has part: feature:182693-186722:-1:exon
so has part: feature:181484-181555:-1:exon
so has part: feature:180923-180997:-1:exon
so has part: feature:180293-180427:-1:exon
so has part: feature:179624-179767:-1:exon
so has part: feature:179350-179493:-1:exon
so has part: feature:178484-178627:-1:exon
so has part: feature:178107-178250:-1:exon
so has part: feature:175414-175494:-1:exon
so has part: feature:174496-174567:-1:exon
so has part: feature:174288-174356:-1:exon
so has part: feature:172652-172815:-1:exon
so has part: feature:171089-171409:-1:exon
so has part: feature:169787-170068:-1:exon
so has part: feature:168097-168546:-1:exon
so has part: feature:167473-167622:-1:exon
so has part: feature:166307-166588:-1:exon
so has part: feature:162365-165422:-1:exon

position:186722:-1
position: 186722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:182693-186722:-1:exon

position:182693:-1
position: 182693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:181484-181555:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:180923-180997:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:180293-180427:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:179624-179767:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:179350-179493:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:178484-178627:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:178107-178250:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:175414-175494:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:174496-174567:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:174288-174356:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:172652-172815:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:171089-171409:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:169787-170068:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:168097-168546:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:167473-167622:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:166307-166588:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:162365-165422:-1:exon

LRIG2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LRIG2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeats and immunoglobulin-like domains protein 2 isoform X1
translation: MLRERRYQSCPLGGSCRPWDLSHNHLLSSNWSIDLSVPTLQEVKMNYNELSEIPYFGETTSNITLLSLVHNTIPEINAEHLQVYLSLENLDLSSNLISEIKASSFPRMQLKYLNLSNNRITTLEAGCLDNLSSSLMVIKLNRNRISMIPPKIFRLPHVQFLELKRNRIKIVESLTFQGLESLKSLKMQRNGISRLMDGAFFGLGNIEELELEHNNLTEVNKGWLYGLRTLQQLYVSQNAITRISPDAWEFCQRLAELDLSYNQLTRLKESAFVGLGLLEKLNLGDNRINHIADGVFRGLTNLQTLDLRNNEISWAIEDANEAFVGLSRLDKLILQGNQIKSITKKAFSGLEGLEHLDLSNNAIMSIQENAFALAHLKELVLNTSSLLCDCQLKWLPQWLSESHLLQSVSVSCAHPEWLAGQSLLSVDPDDFVCDNFPKPQIRVHPETTVALRGTNVTLMCTAVSSSDSPMATAWRKDSEVLYDADIENFARYQQQSGEVLEYTTVLHLLNVNFTDEGKYQCIVTNHFGSNYSNKAKLTVNELPSFLKTPMDLTIRTGAMARLECAAEGHPPPQISWQKDGGTDFPAARERRMHVMPEDDVFFIANVKMEDMGIYSCMAQNIAGGLSANATLTVLETPSFVRPLEDRTVTRGETAVLQCIAGGSPAPRLNWTKDDGPLTVTERHFFAAANQLLIIVDAGLEDAGKYTCIMSNTLGTERGHIYLNVLASPNCDSSQSAIVHEEDGWTTVGIVIIVVVCCVVGTSLVWVIVIYHMRRKNEDYSITNTEEMNLPADIPSYLSSQGTLSEPQEGYSNLEAGSHQQLMPPAGSYMHKGTDGSAAPLVICSDCYDNANIYSRTREYCPYAFITEEDPLDQTLPNLMVQMSKETYTARTQNETSALGNLLADRDVPVFLTNHDKKSDKKISSQQIIEPFQVPLWGGSKDLACSHPQFLHHPLAHEAPQLLRGDGIASRDRDQASPRPCHRLQEENFDFNRTQNIHDHSETT
SIO_010081: LRIG2
subclass of: SO_0000673
so part of: LRIG2
location: complement(join(165196..165422,166307..166588,167473..167622,168097..168546,169787..170068,171089..171409,172652..172815,174288..174356,174496..174567,175414..175494,178107..178250,178484..178627,179350..179493,179624..179767,180293..180427,180923..180997,181484..181555,182693..182748))
location: region:165196-182748:-1
so has part: feature:182693-182748:-1:exon
so has part: feature:181484-181555:-1:exon
so has part: feature:180923-180997:-1:exon
so has part: feature:180293-180427:-1:exon
so has part: feature:179624-179767:-1:exon
so has part: feature:179350-179493:-1:exon
so has part: feature:178484-178627:-1:exon
so has part: feature:178107-178250:-1:exon
so has part: feature:175414-175494:-1:exon
so has part: feature:174496-174567:-1:exon
so has part: feature:174288-174356:-1:exon
so has part: feature:172652-172815:-1:exon
so has part: feature:171089-171409:-1:exon
so has part: feature:169787-170068:-1:exon
so has part: feature:168097-168546:-1:exon
so has part: feature:167473-167622:-1:exon
so has part: feature:166307-166588:-1:exon
so has part: feature:165196-165422:-1:exon

XP_030147599.1
type: Protein
SIO_000068: ncbiprotein

position:165196:-1
position: 165196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:182748:-1
position: 182748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:182693-182748:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:181484-181555:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:180923-180997:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:180293-180427:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:179624-179767:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:179350-179493:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:178484-178627:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:178107-178250:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:175414-175494:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:174496-174567:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:174288-174356:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:172652-172815:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:171089-171409:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:169787-170068:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:168097-168546:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:167473-167622:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:166307-166588:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:165196-165422:-1:exon

LRIG2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LRIG2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeats and immunoglobulin-like domains protein 2 isoform X2
translation: MNYNELSEIPYFGETTSNITLLSLVHNTIPEINAEHLQVYLSLENLDLSSNLISEIKASSFPRMQLKYLNLSNNRITTLEAGCLDNLSSSLMVIKLNRNRISMIPPKIFRLPHVQFLELKRNRIKIVESLTFQGLESLKSLKMQRNGISRLMDGAFFGLGNIEELELEHNNLTEVNKGWLYGLRTLQQLYVSQNAITRISPDAWEFCQRLAELDLSYNQLTRLKESAFVGLGLLEKLNLGDNRINHIADGVFRGLTNLQTLDLRNNEISWAIEDANEAFVGLSRLDKLILQGNQIKSITKKAFSGLEGLEHLDLSNNAIMSIQENAFALAHLKELVLNTSSLLCDCQLKWLPQWLSESHLLQSVSVSCAHPEWLAGQSLLSVDPDDFVCDNFPKPQIRVHPETTVALRGTNVTLMCTAVSSSDSPMATAWRKDSEVLYDADIENFARYQQQSGEVLEYTTVLHLLNVNFTDEGKYQCIVTNHFGSNYSNKAKLTVNELPSFLKTPMDLTIRTGAMARLECAAEGHPPPQISWQKDGGTDFPAARERRMHVMPEDDVFFIANVKMEDMGIYSCMAQNIAGGLSANATLTVLETPSFVRPLEDRTVTRGETAVLQCIAGGSPAPRLNWTKDDGPLTVTERHFFAAANQLLIIVDAGLEDAGKYTCIMSNTLGTERGHIYLNVLASPNCDSSQSAIVHEEDGWTTVGIVIIVVVCCVVGTSLVWVIVIYHMRRKNEDYSITNTEEMNLPADIPSYLSSQGTLSEPQEGYSNLEAGSHQQLMPPAGSYMHKGTDGSAAPLVICSDCYDNANIYSRTREYCPYAFITEEDPLDQTLPNLMVQMSKETYTARTQNETSALGNLLADRDVPVFLTNHDKKSDKKISSQQIIEPFQVPLWGGSKDLACSHPQFLHHPLAHEAPQLLRGDGIASRDRDQASPRPCHRLQEENFDFNRTQNIHDHSETT
SIO_010081: LRIG2
subclass of: SO_0000673
so part of: LRIG2
location: complement(join(165196..165422,166307..166588,167473..167622,168097..168546,169787..170068,171089..171409,172652..172815,174288..174356,174496..174567,175414..175494,178107..178250,178484..178627,179350..179493,179624..179767,180293..180427,180923..180993))
location: region:165196-180993:-1
so has part: feature:180923-180993:-1:exon
so has part: feature:180293-180427:-1:exon
so has part: feature:179624-179767:-1:exon
so has part: feature:179350-179493:-1:exon
so has part: feature:178484-178627:-1:exon
so has part: feature:178107-178250:-1:exon
so has part: feature:175414-175494:-1:exon
so has part: feature:174496-174567:-1:exon
so has part: feature:174288-174356:-1:exon
so has part: feature:172652-172815:-1:exon
so has part: feature:171089-171409:-1:exon
so has part: feature:169787-170068:-1:exon
so has part: feature:168097-168546:-1:exon
so has part: feature:167473-167622:-1:exon
so has part: feature:166307-166588:-1:exon
so has part: feature:165196-165422:-1:exon

XP_030147600.1
type: Protein
SIO_000068: ncbiprotein

position:180993:-1
position: 180993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:180923-180993:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:180293-180427:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:179624-179767:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:179350-179493:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:178484-178627:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:178107-178250:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:175414-175494:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:174496-174567:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:174288-174356:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:172652-172815:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:171089-171409:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:169787-170068:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:168097-168546:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:167473-167622:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:166307-166588:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:165196-165422:-1:exon

SLC16A1
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: SLC16A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 205570..220899
location: region:205570-220899:1
so has part: feature:205570-220899:1:exon
subclass of: SO_0000010

100227544
type: Gene
SIO_000068: ncbigene

position:205570:1
position: 205570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:220899:1
position: 220899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:205570-220899:1:exon

SLC16A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: SLC16A1
product: solute carrier family 16 member 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 ESTs, 3 long SRA reads, 28 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_032753055.2
SIO_010081: SLC16A1
subclass of: SO_0000673
so part of: SLC16A1
location: join(205570..205588,214284..214541,217550..217693,218138..219001,219401..220899)
location: region:205570-220899:1
so has part: feature:205570-205588:1:exon
so has part: feature:214284-214541:1:exon
so has part: feature:217550-217693:1:exon
so has part: feature:218138-219001:1:exon
so has part: feature:219401-220899:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:205570-205588:1:exon

position:205588:1
position: 205588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:214284-214541:1:exon

position:214284:1
position: 214284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:214541:1
position: 214541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:217550-217693:1:exon

position:217550:1
position: 217550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:217693:1
position: 217693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:218138-219001:1:exon

position:218138:1
position: 218138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:219001:1
position: 219001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:219401-220899:1:exon

position:219401:1
position: 219401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SLC16A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: SLC16A1
product: solute carrier family 16 member 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 ESTs, 3 long SRA reads, 28 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_032753056.2
SIO_010081: SLC16A1
subclass of: SO_0000673
so part of: SLC16A1
location: join(205621..205637,214284..214541,217550..217693,218138..219001,219401..220899)
location: region:205621-220899:1
so has part: feature:205621-205637:1:exon
so has part: feature:214284-214541:1:exon
so has part: feature:217550-217693:1:exon
so has part: feature:218138-219001:1:exon
so has part: feature:219401-220899:1:exon

position:205621:1
position: 205621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:205621-205637:1:exon

position:205637:1
position: 205637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:214284-214541:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:217550-217693:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:218138-219001:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:219401-220899:1:exon

SLC16A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: SLC16A1
product: solute carrier family 16 member 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 ESTs, 9 long SRA reads, 28 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 85 samples with support for all annotated introns
transcript id: XM_030291941.3
SIO_010081: SLC16A1
subclass of: SO_0000673
so part of: SLC16A1
location: join(205741..205842,214284..214541,217550..217693,218138..219001,219401..220899)
location: region:205741-220899:1
so has part: feature:205741-205842:1:exon
so has part: feature:214284-214541:1:exon
so has part: feature:217550-217693:1:exon
so has part: feature:218138-219001:1:exon
so has part: feature:219401-220899:1:exon

position:205741:1
position: 205741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:205741-205842:1:exon

position:205842:1
position: 205842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:214284-214541:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:217550-217693:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:218138-219001:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:219401-220899:1:exon

SLC16A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: SLC16A1
product: solute carrier family 16 member 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 ESTs, 3 long SRA reads, 28 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_030291943.3
SIO_010081: SLC16A1
subclass of: SO_0000673
so part of: SLC16A1
location: join(205858..205879,214284..214541,217550..217693,218138..219001,219401..220899)
location: region:205858-220899:1
so has part: feature:205858-205879:1:exon
so has part: feature:214284-214541:1:exon
so has part: feature:217550-217693:1:exon
so has part: feature:218138-219001:1:exon
so has part: feature:219401-220899:1:exon

position:205858:1
position: 205858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:205858-205879:1:exon

position:205879:1
position: 205879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:214284-214541:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:217550-217693:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:218138-219001:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:219401-220899:1:exon

SLC16A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: SLC16A1
product: solute carrier family 16 member 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 ESTs, 3 long SRA reads, 28 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_032753057.2
SIO_010081: SLC16A1
subclass of: SO_0000673
so part of: SLC16A1
location: join(206216..206233,214284..214541,217550..217693,218138..219001,219401..220899)
location: region:206216-220899:1
so has part: feature:206216-206233:1:exon
so has part: feature:214284-214541:1:exon
so has part: feature:217550-217693:1:exon
so has part: feature:218138-219001:1:exon
so has part: feature:219401-220899:1:exon

position:206216:1
position: 206216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:206216-206233:1:exon

position:206233:1
position: 206233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:214284-214541:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:217550-217693:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:218138-219001:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:219401-220899:1:exon

SLC16A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: SLC16A1
product: solute carrier family 16 member 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 ESTs, 4 long SRA reads, 28 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 42 samples with support for all annotated introns
transcript id: XM_030291942.3
SIO_010081: SLC16A1
subclass of: SO_0000673
so part of: SLC16A1
location: join(206418..206667,214284..214541,217550..217693,218138..219001,219401..220899)
location: region:206418-220899:1
so has part: feature:206418-206667:1:exon
so has part: feature:214284-214541:1:exon
so has part: feature:217550-217693:1:exon
so has part: feature:218138-219001:1:exon
so has part: feature:219401-220899:1:exon

position:206418:1
position: 206418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:206418-206667:1:exon

position:206667:1
position: 206667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:214284-214541:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:217550-217693:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:218138-219001:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:219401-220899:1:exon

SLC16A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: SLC16A1
product: solute carrier family 16 member 1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 ESTs, 3 long SRA reads, 28 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 43 samples with support for all annotated introns
transcript id: XM_032753054.2
SIO_010081: SLC16A1
subclass of: SO_0000673
so part of: SLC16A1
location: join(206653..206671,214284..214541,217550..217693,218138..219001,219401..220899)
location: region:206653-220899:1
so has part: feature:206653-206671:1:exon
so has part: feature:214284-214541:1:exon
so has part: feature:217550-217693:1:exon
so has part: feature:218138-219001:1:exon
so has part: feature:219401-220899:1:exon

position:206653:1
position: 206653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:206653-206671:1:exon

position:206671:1
position: 206671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:214284-214541:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:217550-217693:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:218138-219001:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:219401-220899:1:exon

SLC16A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: SLC16A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: monocarboxylate transporter 1
translation: MPPAIGGPVGYTPPEGGWGWAVVVGAFISIGFSYAFPKSITVFFKEIEVIFNASSSKVSWISSIMLAVMYAGGPISSILVNKYGSRPIMIAGGCLSGCGLIAASFCNTVEELYFCVGVIGGLGLAFNLNPALTMIGKYFFKKRPLANGLAMAGSPVFLSTLAPVNQLFFGIFGWRGSFLILGGLLLNCCVAGSLMRPIGPKPDQQKKEANKEVQQEAGKAGKKDDGDTSTDLIDGKAKKEKSSFFQTINKFLDLSLFTHRGFLLYLSGNVIMFFGLFAPLVFLSNYAKSKKIASDSAAFLLSILAIVDMVARPSMGLVANTKWVRPRIQYFFAISIIYNGVCHLLVPMSTSYAGFCIYAGFFGFAFGWLSSILFETLMDLVGAQRFSSAVGLVTIVECCPVLLGPPMLGKLHDIYGDYKYTYWACGVVLIISGIYLFIGMGINYRLVAKEEKARKDEETNIDEAEKQKGAKNDVAPSSQKNVEDGVKEEESRM
SIO_010081: SLC16A1
subclass of: SO_0000673
so part of: SLC16A1
location: join(214325..214541,217550..217693,218138..219001,219401..219657)
location: region:214325-219657:1
so has part: feature:214325-214541:1:exon
so has part: feature:217550-217693:1:exon
so has part: feature:218138-219001:1:exon
so has part: feature:219401-219657:1:exon

XP_030147801.1
type: Protein
SIO_000068: ncbiprotein

position:214325:1
position: 214325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:219657:1
position: 219657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:214325-214541:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:217550-217693:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:218138-219001:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:219401-219657:1:exon

SLC16A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: SLC16A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: monocarboxylate transporter 1
translation: MPPAIGGPVGYTPPEGGWGWAVVVGAFISIGFSYAFPKSITVFFKEIEVIFNASSSKVSWISSIMLAVMYAGGPISSILVNKYGSRPIMIAGGCLSGCGLIAASFCNTVEELYFCVGVIGGLGLAFNLNPALTMIGKYFFKKRPLANGLAMAGSPVFLSTLAPVNQLFFGIFGWRGSFLILGGLLLNCCVAGSLMRPIGPKPDQQKKEANKEVQQEAGKAGKKDDGDTSTDLIDGKAKKEKSSFFQTINKFLDLSLFTHRGFLLYLSGNVIMFFGLFAPLVFLSNYAKSKKIASDSAAFLLSILAIVDMVARPSMGLVANTKWVRPRIQYFFAISIIYNGVCHLLVPMSTSYAGFCIYAGFFGFAFGWLSSILFETLMDLVGAQRFSSAVGLVTIVECCPVLLGPPMLGKLHDIYGDYKYTYWACGVVLIISGIYLFIGMGINYRLVAKEEKARKDEETNIDEAEKQKGAKNDVAPSSQKNVEDGVKEEESRM
SIO_010081: SLC16A1
subclass of: SO_0000673
so part of: SLC16A1
location: join(214325..214541,217550..217693,218138..219001,219401..219657)
location: region:214325-219657:1
so has part: feature:214325-214541:1:exon
so has part: feature:217550-217693:1:exon
so has part: feature:218138-219001:1:exon
so has part: feature:219401-219657:1:exon

XP_030147802.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:214325-214541:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:217550-217693:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:218138-219001:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:219401-219657:1:exon

SLC16A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: SLC16A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: monocarboxylate transporter 1
translation: MPPAIGGPVGYTPPEGGWGWAVVVGAFISIGFSYAFPKSITVFFKEIEVIFNASSSKVSWISSIMLAVMYAGGPISSILVNKYGSRPIMIAGGCLSGCGLIAASFCNTVEELYFCVGVIGGLGLAFNLNPALTMIGKYFFKKRPLANGLAMAGSPVFLSTLAPVNQLFFGIFGWRGSFLILGGLLLNCCVAGSLMRPIGPKPDQQKKEANKEVQQEAGKAGKKDDGDTSTDLIDGKAKKEKSSFFQTINKFLDLSLFTHRGFLLYLSGNVIMFFGLFAPLVFLSNYAKSKKIASDSAAFLLSILAIVDMVARPSMGLVANTKWVRPRIQYFFAISIIYNGVCHLLVPMSTSYAGFCIYAGFFGFAFGWLSSILFETLMDLVGAQRFSSAVGLVTIVECCPVLLGPPMLGKLHDIYGDYKYTYWACGVVLIISGIYLFIGMGINYRLVAKEEKARKDEETNIDEAEKQKGAKNDVAPSSQKNVEDGVKEEESRM
SIO_010081: SLC16A1
subclass of: SO_0000673
so part of: SLC16A1
location: join(214325..214541,217550..217693,218138..219001,219401..219657)
location: region:214325-219657:1
so has part: feature:214325-214541:1:exon
so has part: feature:217550-217693:1:exon
so has part: feature:218138-219001:1:exon
so has part: feature:219401-219657:1:exon

XP_030147803.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:214325-214541:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:217550-217693:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:218138-219001:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:219401-219657:1:exon

SLC16A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: SLC16A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: monocarboxylate transporter 1
translation: MPPAIGGPVGYTPPEGGWGWAVVVGAFISIGFSYAFPKSITVFFKEIEVIFNASSSKVSWISSIMLAVMYAGGPISSILVNKYGSRPIMIAGGCLSGCGLIAASFCNTVEELYFCVGVIGGLGLAFNLNPALTMIGKYFFKKRPLANGLAMAGSPVFLSTLAPVNQLFFGIFGWRGSFLILGGLLLNCCVAGSLMRPIGPKPDQQKKEANKEVQQEAGKAGKKDDGDTSTDLIDGKAKKEKSSFFQTINKFLDLSLFTHRGFLLYLSGNVIMFFGLFAPLVFLSNYAKSKKIASDSAAFLLSILAIVDMVARPSMGLVANTKWVRPRIQYFFAISIIYNGVCHLLVPMSTSYAGFCIYAGFFGFAFGWLSSILFETLMDLVGAQRFSSAVGLVTIVECCPVLLGPPMLGKLHDIYGDYKYTYWACGVVLIISGIYLFIGMGINYRLVAKEEKARKDEETNIDEAEKQKGAKNDVAPSSQKNVEDGVKEEESRM
SIO_010081: SLC16A1
subclass of: SO_0000673
so part of: SLC16A1
location: join(214325..214541,217550..217693,218138..219001,219401..219657)
location: region:214325-219657:1
so has part: feature:214325-214541:1:exon
so has part: feature:217550-217693:1:exon
so has part: feature:218138-219001:1:exon
so has part: feature:219401-219657:1:exon

XP_032608945.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:214325-214541:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:217550-217693:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:218138-219001:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:219401-219657:1:exon

SLC16A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: SLC16A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: monocarboxylate transporter 1
translation: MPPAIGGPVGYTPPEGGWGWAVVVGAFISIGFSYAFPKSITVFFKEIEVIFNASSSKVSWISSIMLAVMYAGGPISSILVNKYGSRPIMIAGGCLSGCGLIAASFCNTVEELYFCVGVIGGLGLAFNLNPALTMIGKYFFKKRPLANGLAMAGSPVFLSTLAPVNQLFFGIFGWRGSFLILGGLLLNCCVAGSLMRPIGPKPDQQKKEANKEVQQEAGKAGKKDDGDTSTDLIDGKAKKEKSSFFQTINKFLDLSLFTHRGFLLYLSGNVIMFFGLFAPLVFLSNYAKSKKIASDSAAFLLSILAIVDMVARPSMGLVANTKWVRPRIQYFFAISIIYNGVCHLLVPMSTSYAGFCIYAGFFGFAFGWLSSILFETLMDLVGAQRFSSAVGLVTIVECCPVLLGPPMLGKLHDIYGDYKYTYWACGVVLIISGIYLFIGMGINYRLVAKEEKARKDEETNIDEAEKQKGAKNDVAPSSQKNVEDGVKEEESRM
SIO_010081: SLC16A1
subclass of: SO_0000673
so part of: SLC16A1
location: join(214325..214541,217550..217693,218138..219001,219401..219657)
location: region:214325-219657:1
so has part: feature:214325-214541:1:exon
so has part: feature:217550-217693:1:exon
so has part: feature:218138-219001:1:exon
so has part: feature:219401-219657:1:exon

XP_032608946.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:214325-214541:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:217550-217693:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:218138-219001:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:219401-219657:1:exon

SLC16A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: SLC16A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: monocarboxylate transporter 1
translation: MPPAIGGPVGYTPPEGGWGWAVVVGAFISIGFSYAFPKSITVFFKEIEVIFNASSSKVSWISSIMLAVMYAGGPISSILVNKYGSRPIMIAGGCLSGCGLIAASFCNTVEELYFCVGVIGGLGLAFNLNPALTMIGKYFFKKRPLANGLAMAGSPVFLSTLAPVNQLFFGIFGWRGSFLILGGLLLNCCVAGSLMRPIGPKPDQQKKEANKEVQQEAGKAGKKDDGDTSTDLIDGKAKKEKSSFFQTINKFLDLSLFTHRGFLLYLSGNVIMFFGLFAPLVFLSNYAKSKKIASDSAAFLLSILAIVDMVARPSMGLVANTKWVRPRIQYFFAISIIYNGVCHLLVPMSTSYAGFCIYAGFFGFAFGWLSSILFETLMDLVGAQRFSSAVGLVTIVECCPVLLGPPMLGKLHDIYGDYKYTYWACGVVLIISGIYLFIGMGINYRLVAKEEKARKDEETNIDEAEKQKGAKNDVAPSSQKNVEDGVKEEESRM
SIO_010081: SLC16A1
subclass of: SO_0000673
so part of: SLC16A1
location: join(214325..214541,217550..217693,218138..219001,219401..219657)
location: region:214325-219657:1
so has part: feature:214325-214541:1:exon
so has part: feature:217550-217693:1:exon
so has part: feature:218138-219001:1:exon
so has part: feature:219401-219657:1:exon

XP_032608947.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:214325-214541:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:217550-217693:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:218138-219001:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:219401-219657:1:exon

SLC16A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: SLC16A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: monocarboxylate transporter 1
translation: MPPAIGGPVGYTPPEGGWGWAVVVGAFISIGFSYAFPKSITVFFKEIEVIFNASSSKVSWISSIMLAVMYAGGPISSILVNKYGSRPIMIAGGCLSGCGLIAASFCNTVEELYFCVGVIGGLGLAFNLNPALTMIGKYFFKKRPLANGLAMAGSPVFLSTLAPVNQLFFGIFGWRGSFLILGGLLLNCCVAGSLMRPIGPKPDQQKKEANKEVQQEAGKAGKKDDGDTSTDLIDGKAKKEKSSFFQTINKFLDLSLFTHRGFLLYLSGNVIMFFGLFAPLVFLSNYAKSKKIASDSAAFLLSILAIVDMVARPSMGLVANTKWVRPRIQYFFAISIIYNGVCHLLVPMSTSYAGFCIYAGFFGFAFGWLSSILFETLMDLVGAQRFSSAVGLVTIVECCPVLLGPPMLGKLHDIYGDYKYTYWACGVVLIISGIYLFIGMGINYRLVAKEEKARKDEETNIDEAEKQKGAKNDVAPSSQKNVEDGVKEEESRM
SIO_010081: SLC16A1
subclass of: SO_0000673
so part of: SLC16A1
location: join(214325..214541,217550..217693,218138..219001,219401..219657)
location: region:214325-219657:1
so has part: feature:214325-214541:1:exon
so has part: feature:217550-217693:1:exon
so has part: feature:218138-219001:1:exon
so has part: feature:219401-219657:1:exon

XP_032608948.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:214325-214541:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:217550-217693:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:218138-219001:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:219401-219657:1:exon

TAFA3
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: TAFA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(255384..281314)
location: region:255384-281314:-1
so has part: feature:255384-281314:-1:exon
subclass of: SO_0000010

100218830
type: Gene
SIO_000068: ncbigene

position:255384:-1
position: 255384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:281314:-1
position: 281314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:255384-281314:-1:exon

TAFA3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: TAFA3
product: TAFA chemokine like family member 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_041721228.1
SIO_010081: TAFA3
subclass of: SO_0000673
so part of: TAFA3
location: complement(join(255384..255739,262548..262672,263620..263769,270752..271015,271138..271222,281014..281314))
location: region:255384-281314:-1
so has part: feature:281014-281314:-1:exon
so has part: feature:271138-271222:-1:exon
so has part: feature:270752-271015:-1:exon
so has part: feature:263620-263769:-1:exon
so has part: feature:262548-262672:-1:exon
so has part: feature:255384-255739:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:281014-281314:-1:exon

position:281014:-1
position: 281014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:271138-271222:-1:exon

position:271138:-1
position: 271138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:271222:-1
position: 271222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:270752-271015:-1:exon

position:270752:-1
position: 270752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:271015:-1
position: 271015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:263620-263769:-1:exon

position:263620:-1
position: 263620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:263769:-1
position: 263769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:262548-262672:-1:exon

position:262548:-1
position: 262548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:262672:-1
position: 262672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:255384-255739:-1:exon

position:255739:-1
position: 255739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TAFA3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: TAFA3
product: TAFA chemokine like family member 3, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_032753098.2
SIO_010081: TAFA3
subclass of: SO_0000673
so part of: TAFA3
location: complement(join(255384..255739,262548..262672,263620..263769,270752..270870,271138..271222,275569..275720))
location: region:255384-275720:-1
so has part: feature:275569-275720:-1:exon
so has part: feature:271138-271222:-1:exon
so has part: feature:270752-270870:-1:exon
so has part: feature:263620-263769:-1:exon
so has part: feature:262548-262672:-1:exon
so has part: feature:255384-255739:-1:exon

position:275720:-1
position: 275720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:275569-275720:-1:exon

position:275569:-1
position: 275569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:271138-271222:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:270752-270870:-1:exon

position:270870:-1
position: 270870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:263620-263769:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:262548-262672:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:255384-255739:-1:exon

TAFA3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: TAFA3
product: TAFA chemokine like family member 3, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_032753100.2
SIO_010081: TAFA3
subclass of: SO_0000673
so part of: TAFA3
location: complement(join(255384..255739,262548..262672,263620..263769,270752..270870,270942..270999,271138..271222,275569..275720))
location: region:255384-275720:-1
so has part: feature:275569-275720:-1:exon
so has part: feature:271138-271222:-1:exon
so has part: feature:270942-270999:-1:exon
so has part: feature:270752-270870:-1:exon
so has part: feature:263620-263769:-1:exon
so has part: feature:262548-262672:-1:exon
so has part: feature:255384-255739:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:275569-275720:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:271138-271222:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:270942-270999:-1:exon

position:270942:-1
position: 270942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:270999:-1
position: 270999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:270752-270870:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:263620-263769:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:262548-262672:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:255384-255739:-1:exon

TAFA3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: TAFA3
product: TAFA chemokine like family member 3, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_041721232.1
SIO_010081: TAFA3
subclass of: SO_0000673
so part of: TAFA3
location: complement(join(255384..255739,262548..262672,263620..263769,270752..270999,271138..271222,275569..275720))
location: region:255384-275720:-1
so has part: feature:275569-275720:-1:exon
so has part: feature:271138-271222:-1:exon
so has part: feature:270752-270999:-1:exon
so has part: feature:263620-263769:-1:exon
so has part: feature:262548-262672:-1:exon
so has part: feature:255384-255739:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:275569-275720:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:271138-271222:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:270752-270999:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:263620-263769:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:262548-262672:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:255384-255739:-1:exon

TAFA3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: TAFA3
product: TAFA chemokine like family member 3, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_032753099.2
SIO_010081: TAFA3
subclass of: SO_0000673
so part of: TAFA3
location: complement(join(255384..255739,262548..262672,263620..263769,270752..270870,270942..271015,271138..271222,275569..275720))
location: region:255384-275720:-1
so has part: feature:275569-275720:-1:exon
so has part: feature:271138-271222:-1:exon
so has part: feature:270942-271015:-1:exon
so has part: feature:270752-270870:-1:exon
so has part: feature:263620-263769:-1:exon
so has part: feature:262548-262672:-1:exon
so has part: feature:255384-255739:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:275569-275720:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:271138-271222:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:270942-271015:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:270752-270870:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:263620-263769:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:262548-262672:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:255384-255739:-1:exon

TAFA3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: TAFA3
product: TAFA chemokine like family member 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_041721227.1
SIO_010081: TAFA3
subclass of: SO_0000673
so part of: TAFA3
location: complement(join(255384..255739,262548..262672,263620..263769,270752..271015,271138..271222,275569..275720))
location: region:255384-275720:-1
so has part: feature:275569-275720:-1:exon
so has part: feature:271138-271222:-1:exon
so has part: feature:270752-271015:-1:exon
so has part: feature:263620-263769:-1:exon
so has part: feature:262548-262672:-1:exon
so has part: feature:255384-255739:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:275569-275720:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:271138-271222:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:270752-271015:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:263620-263769:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:262548-262672:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:255384-255739:-1:exon

TAFA3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: TAFA3
product: TAFA chemokine like family member 3, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_041721231.1
SIO_010081: TAFA3
subclass of: SO_0000673
so part of: TAFA3
location: complement(join(255384..255739,262548..262672,263620..263769,270752..271130))
location: region:255384-271130:-1
so has part: feature:270752-271130:-1:exon
so has part: feature:263620-263769:-1:exon
so has part: feature:262548-262672:-1:exon
so has part: feature:255384-255739:-1:exon

position:271130:-1
position: 271130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:270752-271130:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:263620-263769:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:262548-262672:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:255384-255739:-1:exon

TAFA3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: TAFA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chemokine-like protein TAFA-3 isoform X1
translation: MHRCDRESPVKGPCPHSQTPQSSQRSGVIPLRAGTLVSRSAPPSPPQSLFLHISLLVFGRMSERDIQSLSKWVFVLSLCLTTLWGRLTLASTHHHRSHPVHVEPGTCEVIAAHRCCNKNKIEERSQTVKCSCFPGQVAGTTRAAPSCVDASIVLQKWWCQMEPCLDGEECKVLPDLSGWSCSSGNKVKTTKLPHVSQEPAPWSPVQ
SIO_010081: TAFA3
subclass of: SO_0000673
so part of: TAFA3
location: complement(join(255692..255739,262548..262672,263620..263769,270752..271015,271138..271171))
location: region:255692-271171:-1
so has part: feature:271138-271171:-1:exon
so has part: feature:270752-271015:-1:exon
so has part: feature:263620-263769:-1:exon
so has part: feature:262548-262672:-1:exon
so has part: feature:255692-255739:-1:exon

XP_041577161.1
type: Protein
SIO_000068: ncbiprotein

position:255692:-1
position: 255692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:271171:-1
position: 271171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:271138-271171:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:270752-271015:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:263620-263769:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:262548-262672:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:255692-255739:-1:exon

TAFA3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: TAFA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chemokine-like protein TAFA-3 isoform X1
translation: MHRCDRESPVKGPCPHSQTPQSSQRSGVIPLRAGTLVSRSAPPSPPQSLFLHISLLVFGRMSERDIQSLSKWVFVLSLCLTTLWGRLTLASTHHHRSHPVHVEPGTCEVIAAHRCCNKNKIEERSQTVKCSCFPGQVAGTTRAAPSCVDASIVLQKWWCQMEPCLDGEECKVLPDLSGWSCSSGNKVKTTKLPHVSQEPAPWSPVQ
SIO_010081: TAFA3
subclass of: SO_0000673
so part of: TAFA3
location: complement(join(255692..255739,262548..262672,263620..263769,270752..271015,271138..271171))
location: region:255692-271171:-1
so has part: feature:271138-271171:-1:exon
so has part: feature:270752-271015:-1:exon
so has part: feature:263620-263769:-1:exon
so has part: feature:262548-262672:-1:exon
so has part: feature:255692-255739:-1:exon

XP_041577162.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:271138-271171:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:270752-271015:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:263620-263769:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:262548-262672:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:255692-255739:-1:exon

TAFA3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: TAFA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chemokine-like protein TAFA-3 isoform X4
translation: MSERDIQSLSKWVFVLSLCLTTLWGRLTLASTHHHRSHPVHVEPGTCEVIAAHRCCNKNKIEERSQTVKCSCFPGQVAGTTRAAPSCVDASIVLQKWWCQMEPCLDGEECKVLPDLSGWSCSSGNKVKTTKLPHVSQEPAPWSPVQ
SIO_010081: TAFA3
subclass of: SO_0000673
so part of: TAFA3
location: complement(join(255692..255739,262548..262672,263620..263769,270752..270869))
location: region:255692-270869:-1
so has part: feature:270752-270869:-1:exon
so has part: feature:263620-263769:-1:exon
so has part: feature:262548-262672:-1:exon
so has part: feature:255692-255739:-1:exon

XP_032608989.1
type: Protein
SIO_000068: ncbiprotein

position:270869:-1
position: 270869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:270752-270869:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:263620-263769:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:262548-262672:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:255692-255739:-1:exon

TAFA3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: TAFA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chemokine-like protein TAFA-3 isoform X4
translation: MSERDIQSLSKWVFVLSLCLTTLWGRLTLASTHHHRSHPVHVEPGTCEVIAAHRCCNKNKIEERSQTVKCSCFPGQVAGTTRAAPSCVDASIVLQKWWCQMEPCLDGEECKVLPDLSGWSCSSGNKVKTTKLPHVSQEPAPWSPVQ
SIO_010081: TAFA3
subclass of: SO_0000673
so part of: TAFA3
location: complement(join(255692..255739,262548..262672,263620..263769,270752..270869))
location: region:255692-270869:-1
so has part: feature:270752-270869:-1:exon
so has part: feature:263620-263769:-1:exon
so has part: feature:262548-262672:-1:exon
so has part: feature:255692-255739:-1:exon

XP_032608990.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:270752-270869:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:263620-263769:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:262548-262672:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:255692-255739:-1:exon

TAFA3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: TAFA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chemokine-like protein TAFA-3 isoform X4
translation: MSERDIQSLSKWVFVLSLCLTTLWGRLTLASTHHHRSHPVHVEPGTCEVIAAHRCCNKNKIEERSQTVKCSCFPGQVAGTTRAAPSCVDASIVLQKWWCQMEPCLDGEECKVLPDLSGWSCSSGNKVKTTKLPHVSQEPAPWSPVQ
SIO_010081: TAFA3
subclass of: SO_0000673
so part of: TAFA3
location: complement(join(255692..255739,262548..262672,263620..263769,270752..270869))
location: region:255692-270869:-1
so has part: feature:270752-270869:-1:exon
so has part: feature:263620-263769:-1:exon
so has part: feature:262548-262672:-1:exon
so has part: feature:255692-255739:-1:exon

XP_032608991.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:270752-270869:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:263620-263769:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:262548-262672:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:255692-255739:-1:exon

TAFA3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: TAFA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chemokine-like protein TAFA-3 isoform X4
translation: MSERDIQSLSKWVFVLSLCLTTLWGRLTLASTHHHRSHPVHVEPGTCEVIAAHRCCNKNKIEERSQTVKCSCFPGQVAGTTRAAPSCVDASIVLQKWWCQMEPCLDGEECKVLPDLSGWSCSSGNKVKTTKLPHVSQEPAPWSPVQ
SIO_010081: TAFA3
subclass of: SO_0000673
so part of: TAFA3
location: complement(join(255692..255739,262548..262672,263620..263769,270752..270869))
location: region:255692-270869:-1
so has part: feature:270752-270869:-1:exon
so has part: feature:263620-263769:-1:exon
so has part: feature:262548-262672:-1:exon
so has part: feature:255692-255739:-1:exon

XP_041577165.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:270752-270869:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:263620-263769:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:262548-262672:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:255692-255739:-1:exon

TAFA3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: TAFA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chemokine-like protein TAFA-3 isoform X4
translation: MSERDIQSLSKWVFVLSLCLTTLWGRLTLASTHHHRSHPVHVEPGTCEVIAAHRCCNKNKIEERSQTVKCSCFPGQVAGTTRAAPSCVDASIVLQKWWCQMEPCLDGEECKVLPDLSGWSCSSGNKVKTTKLPHVSQEPAPWSPVQ
SIO_010081: TAFA3
subclass of: SO_0000673
so part of: TAFA3
location: complement(join(255692..255739,262548..262672,263620..263769,270752..270869))
location: region:255692-270869:-1
so has part: feature:270752-270869:-1:exon
so has part: feature:263620-263769:-1:exon
so has part: feature:262548-262672:-1:exon
so has part: feature:255692-255739:-1:exon

XP_041577166.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:270752-270869:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:263620-263769:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:262548-262672:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:255692-255739:-1:exon

TAFA3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: TAFA3
product: TAFA chemokine like family member 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 70 samples with support for all annotated introns
transcript id: XM_041721229.1
SIO_010081: TAFA3
subclass of: SO_0000673
so part of: TAFA3
location: complement(join(260284..261476,262548..262672,263620..263769,270752..271015,271138..271222,275569..275719))
location: region:260284-275719:-1
so has part: feature:275569-275719:-1:exon
so has part: feature:271138-271222:-1:exon
so has part: feature:270752-271015:-1:exon
so has part: feature:263620-263769:-1:exon
so has part: feature:262548-262672:-1:exon
so has part: feature:260284-261476:-1:exon

position:260284:-1
position: 260284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:275719:-1
position: 275719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:275569-275719:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:271138-271222:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:270752-271015:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:263620-263769:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:262548-262672:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:260284-261476:-1:exon

position:261476:-1
position: 261476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TAFA3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: TAFA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chemokine-like protein TAFA-3 isoform X2
translation: MHRCDRESPVKGPCPHSQTPQSSQRSGVIPLRAGTLVSRSAPPSPPQSLFLHISLLVFGRMSERDIQSLSKWVFVLSLCLTTLWGRLTLASTHHHRSHPVHVEPGTCEVIAAHRCCNKNKIEERSQTVKCSCFPGQVAGTTRAAPSCVDASIVLQKWWCQMEPCLDGEECKVLPDLSGWSCSSGNKVKTTKVTR
SIO_010081: TAFA3
subclass of: SO_0000673
so part of: TAFA3
location: complement(join(261465..261476,262548..262672,263620..263769,270752..271015,271138..271171))
location: region:261465-271171:-1
so has part: feature:271138-271171:-1:exon
so has part: feature:270752-271015:-1:exon
so has part: feature:263620-263769:-1:exon
so has part: feature:262548-262672:-1:exon
so has part: feature:261465-261476:-1:exon

XP_041577163.1
type: Protein
SIO_000068: ncbiprotein

position:261465:-1
position: 261465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:271138-271171:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:270752-271015:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:263620-263769:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:262548-262672:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:261465-261476:-1:exon

TAFA3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: TAFA3
product: TAFA chemokine like family member 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_041721230.1
SIO_010081: TAFA3
subclass of: SO_0000673
so part of: TAFA3
location: complement(join(262679..262794,263620..263769,270752..271015,271138..271222,275569..275720))
location: region:262679-275720:-1
so has part: feature:275569-275720:-1:exon
so has part: feature:271138-271222:-1:exon
so has part: feature:270752-271015:-1:exon
so has part: feature:263620-263769:-1:exon
so has part: feature:262679-262794:-1:exon

position:262679:-1
position: 262679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:275569-275720:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:271138-271222:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:270752-271015:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:263620-263769:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:262679-262794:-1:exon

position:262794:-1
position: 262794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TAFA3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: TAFA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chemokine-like protein TAFA-3 isoform X3
translation: MHRCDRESPVKGPCPHSQTPQSSQRSGVIPLRAGTLVSRSAPPSPPQSLFLHISLLVFGRMSERDIQSLSKWVFVLSLCLTTLWGRLTLASTHHHRSHPVHVEPGTCEVIAAHRCCNKNKIEERSQTVKCSCFPGQVAGTTRAAPSCVDGLSCELCWREGLHLLVSPKGGQSWSS
SIO_010081: TAFA3
subclass of: SO_0000673
so part of: TAFA3
location: complement(join(262715..262794,263620..263769,270752..271015,271138..271171))
location: region:262715-271171:-1
so has part: feature:271138-271171:-1:exon
so has part: feature:270752-271015:-1:exon
so has part: feature:263620-263769:-1:exon
so has part: feature:262715-262794:-1:exon

XP_041577164.1
type: Protein
SIO_000068: ncbiprotein

position:262715:-1
position: 262715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:271138-271171:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:270752-271015:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:263620-263769:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:262715-262794:-1:exon

PPM1J
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: PPM1J
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 281387..292956
location: region:281387-292956:1
so has part: feature:281387-292956:1:exon
subclass of: SO_0000010

101233786
type: Gene
SIO_000068: ncbigene

position:281387:1
position: 281387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:292956:1
position: 292956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:281387-292956:1:exon

PPM1J
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: PPM1J
product: protein phosphatase, Mg2+/Mn2+ dependent 1J, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_030292014.3
SIO_010081: PPM1J
subclass of: SO_0000673
so part of: PPM1J
location: join(281387..281680,282920..283046,283503..283826,284283..284395,285955..286039,287522..287640,287816..287879,288047..288154,288298..288449,292861..292956)
location: region:281387-292956:1
so has part: feature:281387-281680:1:exon
so has part: feature:282920-283046:1:exon
so has part: feature:283503-283826:1:exon
so has part: feature:284283-284395:1:exon
so has part: feature:285955-286039:1:exon
so has part: feature:287522-287640:1:exon
so has part: feature:287816-287879:1:exon
so has part: feature:288047-288154:1:exon
so has part: feature:288298-288449:1:exon
so has part: feature:292861-292956:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:281387-281680:1:exon

position:281680:1
position: 281680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:282920-283046:1:exon

position:282920:1
position: 282920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:283046:1
position: 283046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:283503-283826:1:exon

position:283503:1
position: 283503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:283826:1
position: 283826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:284283-284395:1:exon

position:284283:1
position: 284283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:284395:1
position: 284395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:285955-286039:1:exon

position:285955:1
position: 285955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:286039:1
position: 286039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:287522-287640:1:exon

position:287522:1
position: 287522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:287640:1
position: 287640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:287816-287879:1:exon

position:287816:1
position: 287816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:287879:1
position: 287879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:288047-288154:1:exon

position:288047:1
position: 288047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:288154:1
position: 288154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:288298-288449:1:exon

position:288298:1
position: 288298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:288449:1
position: 288449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:292861-292956:1:exon

position:292861:1
position: 292861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PPM1J
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: PPM1J
product: protein phosphatase, Mg2+/Mn2+ dependent 1J, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 48 samples with support for all annotated introns
transcript id: XM_030292013.2
SIO_010081: PPM1J
subclass of: SO_0000673
so part of: PPM1J
location: join(281389..281680,282920..283046,283503..283826,284283..284395,285955..286039,287522..287640,287816..287879,288047..288154,288298..288449,288714..291024)
location: region:281389-291024:1
so has part: feature:281389-281680:1:exon
so has part: feature:282920-283046:1:exon
so has part: feature:283503-283826:1:exon
so has part: feature:284283-284395:1:exon
so has part: feature:285955-286039:1:exon
so has part: feature:287522-287640:1:exon
so has part: feature:287816-287879:1:exon
so has part: feature:288047-288154:1:exon
so has part: feature:288298-288449:1:exon
so has part: feature:288714-291024:1:exon

position:281389:1
position: 281389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:291024:1
position: 291024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:281389-281680:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:282920-283046:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:283503-283826:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:284283-284395:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:285955-286039:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:287522-287640:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:287816-287879:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:288047-288154:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:288298-288449:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:288714-291024:1:exon

position:288714:1
position: 288714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PPM1J
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: PPM1J
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein phosphatase 1J isoform X2
translation: MLLRVRAAVAQLAAGLGAQPPAEARGAGAGAGAGAGRGSPPPAAFCRPAFLQLTPEELRRADDHAGRAVQSPRDGRRRLPWSSGYAEVINAGKSQHNEDQACCEVVFVEQRPSPRGWLSSREGSEELDGGRKGFYFHYWALFDGHAGSGAAVMASERLHLHICEQLRDLVEILQDPSPPPVCLPREAQTGSADPNQMSYAEDRGEVLNDAVPRFHLEKAVSHESLVIGAIENAFKHMDDQIERERASQHLAGGCCALAAIYLMGKFYVANAGDSRAIIIRNGEIIPMSREFTPETERQRLQFLALLRPELLGKEFTHLEFPRRIQPKELGKKMLYRDQNMNGWAYKKIEEDDLKFPLIFGEGKKARMMATIGVTRGLGDHDLKVFSSNIHIKPFLSCFPEVRVYDLTQYEHCPDDVLVLGTDGLWDVTNDEEVAAVVMEVLTSYEPNDPCRLSGAFNQAHLPTCRLRWRGVLT
SIO_010081: PPM1J
subclass of: SO_0000673
so part of: PPM1J
location: join(281421..281680,282920..283046,283503..283826,284283..284395,285955..286039,287522..287640,287816..287879,288047..288154,288298..288449,292861..292930)
location: region:281421-292930:1
so has part: feature:281421-281680:1:exon
so has part: feature:282920-283046:1:exon
so has part: feature:283503-283826:1:exon
so has part: feature:284283-284395:1:exon
so has part: feature:285955-286039:1:exon
so has part: feature:287522-287640:1:exon
so has part: feature:287816-287879:1:exon
so has part: feature:288047-288154:1:exon
so has part: feature:288298-288449:1:exon
so has part: feature:292861-292930:1:exon

XP_030147874.1
type: Protein
SIO_000068: ncbiprotein

position:281421:1
position: 281421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:292930:1
position: 292930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:281421-281680:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:282920-283046:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:283503-283826:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:284283-284395:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:285955-286039:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:287522-287640:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:287816-287879:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:288047-288154:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:288298-288449:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:292861-292930:1:exon

PPM1J
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: PPM1J
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein phosphatase 1J isoform X1
translation: MLLRVRAAVAQLAAGLGAQPPAEARGAGAGAGAGAGRGSPPPAAFCRPAFLQLTPEELRRADDHAGRAVQSPRDGRRRLPWSSGYAEVINAGKSQHNEDQACCEVVFVEQRPSPRGWLSSREGSEELDGGRKGFYFHYWALFDGHAGSGAAVMASERLHLHICEQLRDLVEILQDPSPPPVCLPREAQTGSADPNQMSYAEDRGEVLNDAVPRFHLEKAVSHESLVIGAIENAFKHMDDQIERERASQHLAGGCCALAAIYLMGKFYVANAGDSRAIIIRNGEIIPMSREFTPETERQRLQFLALLRPELLGKEFTHLEFPRRIQPKELGKKMLYRDQNMNGWAYKKIEEDDLKFPLIFGEGKKARMMATIGVTRGLGDHDLKVFSSNIHIKPFLSCFPEVRVYDLTQYEHCPDDVLVLGTDGLWDVTNDEEVAAVVMEVLTSYEPNDPCRYTMVAQELVVRSRGVLKERGWRLANDKLGSGDDISVFVIPLGGPGNYT
SIO_010081: PPM1J
subclass of: SO_0000673
so part of: PPM1J
location: join(281421..281680,282920..283046,283503..283826,284283..284395,285955..286039,287522..287640,287816..287879,288047..288154,288298..288449,288714..288861)
location: region:281421-288861:1
so has part: feature:281421-281680:1:exon
so has part: feature:282920-283046:1:exon
so has part: feature:283503-283826:1:exon
so has part: feature:284283-284395:1:exon
so has part: feature:285955-286039:1:exon
so has part: feature:287522-287640:1:exon
so has part: feature:287816-287879:1:exon
so has part: feature:288047-288154:1:exon
so has part: feature:288298-288449:1:exon
so has part: feature:288714-288861:1:exon

XP_030147873.1
type: Protein
SIO_000068: ncbiprotein

position:288861:1
position: 288861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:281421-281680:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:282920-283046:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:283503-283826:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:284283-284395:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:285955-286039:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:287522-287640:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:287816-287879:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:288047-288154:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:288298-288449:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:288714-288861:1:exon

RHOC
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: RHOC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 288342..300404
location: region:288342-300404:1
so has part: feature:288342-300404:1:exon
subclass of: SO_0000010

100221682
type: Gene
SIO_000068: ncbigene

position:288342:1
position: 288342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:300404:1
position: 300404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:288342-300404:1:exon

RHOC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: RHOC
product: ras homolog family member C, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 93 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_030292017.2
SIO_010081: RHOC
subclass of: SO_0000673
so part of: RHOC
location: join(288342..288449,298597..298754,298978..299098,299384..299514,299631..300404)
location: region:288342-300404:1
so has part: feature:288342-288449:1:exon
so has part: feature:298597-298754:1:exon
so has part: feature:298978-299098:1:exon
so has part: feature:299384-299514:1:exon
so has part: feature:299631-300404:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:288342-288449:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:298597-298754:1:exon

position:298597:1
position: 298597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:298754:1
position: 298754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:298978-299098:1:exon

position:298978:1
position: 298978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:299098:1
position: 299098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:299384-299514:1:exon

position:299384:1
position: 299384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:299514:1
position: 299514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:299631-300404:1:exon

position:299631:1
position: 299631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RHOC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: RHOC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho-related GTP-binding protein RhoC isoform X2
translation: MSPMTHAAMAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYIADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRINAFGYLECSAKTKEGVREVFEMATRAGLQVRKNKKRRGCPLL
SIO_010081: RHOC
subclass of: SO_0000673
so part of: RHOC
location: join(288428..288449,298597..298754,298978..299098,299384..299514,299631..299804)
location: region:288428-299804:1
so has part: feature:288428-288449:1:exon
so has part: feature:298597-298754:1:exon
so has part: feature:298978-299098:1:exon
so has part: feature:299384-299514:1:exon
so has part: feature:299631-299804:1:exon

XP_030147877.1
type: Protein
SIO_000068: ncbiprotein

position:288428:1
position: 288428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:299804:1
position: 299804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:288428-288449:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:298597-298754:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:298978-299098:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:299384-299514:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:299631-299804:1:exon

RHOC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: RHOC
product: ras homolog family member C, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 94 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_030292019.2
SIO_010081: RHOC
subclass of: SO_0000673
so part of: RHOC
location: join(292861..292933,298597..298754,298978..299098,299384..299514,299631..300404)
location: region:292861-300404:1
so has part: feature:292861-292933:1:exon
so has part: feature:298597-298754:1:exon
so has part: feature:298978-299098:1:exon
so has part: feature:299384-299514:1:exon
so has part: feature:299631-300404:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:292861-292933:1:exon

position:292933:1
position: 292933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:298597-298754:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:298978-299098:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:299384-299514:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:299631-300404:1:exon

RHOC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: RHOC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho-related GTP-binding protein RhoC isoform X3
translation: MKTMAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYIADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRINAFGYLECSAKTKEGVREVFEMATRAGLQVRKNKKRRGCPLL
SIO_010081: RHOC
subclass of: SO_0000673
so part of: RHOC
location: join(292927..292933,298597..298754,298978..299098,299384..299514,299631..299804)
location: region:292927-299804:1
so has part: feature:292927-292933:1:exon
so has part: feature:298597-298754:1:exon
so has part: feature:298978-299098:1:exon
so has part: feature:299384-299514:1:exon
so has part: feature:299631-299804:1:exon

XP_030147879.1
type: Protein
SIO_000068: ncbiprotein

position:292927:1
position: 292927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:292927-292933:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:298597-298754:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:298978-299098:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:299384-299514:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:299631-299804:1:exon

RHOC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: RHOC
product: ras homolog family member C, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 94 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 99 samples with support for all annotated introns
transcript id: XM_002191315.5
SIO_010081: RHOC
subclass of: SO_0000673
so part of: RHOC
location: join(293005..293127,298597..298754,298978..299098,299384..299514,299631..300404)
location: region:293005-300404:1
so has part: feature:293005-293127:1:exon
so has part: feature:298597-298754:1:exon
so has part: feature:298978-299098:1:exon
so has part: feature:299384-299514:1:exon
so has part: feature:299631-300404:1:exon

position:293005:1
position: 293005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:293005-293127:1:exon

position:293127:1
position: 293127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:298597-298754:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:298978-299098:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:299384-299514:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:299631-300404:1:exon

RHOC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: RHOC
product: ras homolog family member C, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 93 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 46 samples with support for all annotated introns
transcript id: XM_030292020.2
SIO_010081: RHOC
subclass of: SO_0000673
so part of: RHOC
location: join(293005..293087,298597..298754,298978..299098,299384..299514,299631..300404)
location: region:293005-300404:1
so has part: feature:293005-293087:1:exon
so has part: feature:298597-298754:1:exon
so has part: feature:298978-299098:1:exon
so has part: feature:299384-299514:1:exon
so has part: feature:299631-300404:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:293005-293087:1:exon

position:293087:1
position: 293087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:298597-298754:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:298978-299098:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:299384-299514:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:299631-300404:1:exon

RHOC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: RHOC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho-related GTP-binding protein RhoC isoform X1
translation: MMSFGKGAMAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYIADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRINAFGYLECSAKTKEGVREVFEMATRAGLQVRKNKKRRGCPLL
SIO_010081: RHOC
subclass of: SO_0000673
so part of: RHOC
location: join(293106..293127,298597..298754,298978..299098,299384..299514,299631..299804)
location: region:293106-299804:1
so has part: feature:293106-293127:1:exon
so has part: feature:298597-298754:1:exon
so has part: feature:298978-299098:1:exon
so has part: feature:299384-299514:1:exon
so has part: feature:299631-299804:1:exon

XP_002191351.3
type: Protein
SIO_000068: ncbiprotein

position:293106:1
position: 293106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:293106-293127:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:298597-298754:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:298978-299098:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:299384-299514:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:299631-299804:1:exon

RHOC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: RHOC
product: ras homolog family member C, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 93 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_041721233.1
SIO_010081: RHOC
subclass of: SO_0000673
so part of: RHOC
location: join(293639..294504,298597..298754,298978..299098,299384..299514,299631..300404)
location: region:293639-300404:1
so has part: feature:293639-294504:1:exon
so has part: feature:298597-298754:1:exon
so has part: feature:298978-299098:1:exon
so has part: feature:299384-299514:1:exon
so has part: feature:299631-300404:1:exon

position:293639:1
position: 293639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:293639-294504:1:exon

position:294504:1
position: 294504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:298597-298754:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:298978-299098:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:299384-299514:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:299631-300404:1:exon

RHOC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: RHOC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho-related GTP-binding protein RhoC isoform X4
translation: MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYIADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRINAFGYLECSAKTKEGVREVFEMATRAGLQVRKNKKRRGCPLL
SIO_010081: RHOC
subclass of: SO_0000673
so part of: RHOC
location: join(298599..298754,298978..299098,299384..299514,299631..299804)
location: region:298599-299804:1
so has part: feature:298599-298754:1:exon
so has part: feature:298978-299098:1:exon
so has part: feature:299384-299514:1:exon
so has part: feature:299631-299804:1:exon

XP_030147880.1
type: Protein
SIO_000068: ncbiprotein

position:298599:1
position: 298599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:298599-298754:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:298978-299098:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:299384-299514:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:299631-299804:1:exon

RHOC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: RHOC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho-related GTP-binding protein RhoC isoform X4
translation: MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYIADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRINAFGYLECSAKTKEGVREVFEMATRAGLQVRKNKKRRGCPLL
SIO_010081: RHOC
subclass of: SO_0000673
so part of: RHOC
location: join(298599..298754,298978..299098,299384..299514,299631..299804)
location: region:298599-299804:1
so has part: feature:298599-298754:1:exon
so has part: feature:298978-299098:1:exon
so has part: feature:299384-299514:1:exon
so has part: feature:299631-299804:1:exon

XP_041577167.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:298599-298754:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:298978-299098:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:299384-299514:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:299631-299804:1:exon

MOV10
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: MOV10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(300776..307712)
location: region:300776-307712:-1
so has part: feature:300776-307712:-1:exon
subclass of: SO_0000010

100217900
type: Gene
SIO_000068: ncbigene

position:300776:-1
position: 300776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:307712:-1
position: 307712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:300776-307712:-1:exon

MOV10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: MOV10
product: Mov10 RISC complex RNA helicase, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_030292011.3
SIO_010081: MOV10
subclass of: SO_0000673
so part of: MOV10
location: complement(join(300776..301236,301431..301552,301689..301777,301961..302086,302189..302263,302392..302583,302663..302786,302949..303051,303141..303260,303352..303449,303683..303786,303881..304042,304133..304280,304666..304842,304963..305117,305206..305359,305448..305570,305755..305995,306073..306311,306394..306527,306623..306716,307418..307712))
location: region:300776-307712:-1
so has part: feature:307418-307712:-1:exon
so has part: feature:306623-306716:-1:exon
so has part: feature:306394-306527:-1:exon
so has part: feature:306073-306311:-1:exon
so has part: feature:305755-305995:-1:exon
so has part: feature:305448-305570:-1:exon
so has part: feature:305206-305359:-1:exon
so has part: feature:304963-305117:-1:exon
so has part: feature:304666-304842:-1:exon
so has part: feature:304133-304280:-1:exon
so has part: feature:303881-304042:-1:exon
so has part: feature:303683-303786:-1:exon
so has part: feature:303352-303449:-1:exon
so has part: feature:303141-303260:-1:exon
so has part: feature:302949-303051:-1:exon
so has part: feature:302663-302786:-1:exon
so has part: feature:302392-302583:-1:exon
so has part: feature:302189-302263:-1:exon
so has part: feature:301961-302086:-1:exon
so has part: feature:301689-301777:-1:exon
so has part: feature:301431-301552:-1:exon
so has part: feature:300776-301236:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:307418-307712:-1:exon

position:307418:-1
position: 307418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:306623-306716:-1:exon

position:306623:-1
position: 306623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:306716:-1
position: 306716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:306394-306527:-1:exon

position:306394:-1
position: 306394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:306527:-1
position: 306527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:306073-306311:-1:exon

position:306073:-1
position: 306073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:306311:-1
position: 306311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:305755-305995:-1:exon

position:305755:-1
position: 305755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:305995:-1
position: 305995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:305448-305570:-1:exon

position:305448:-1
position: 305448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:305570:-1
position: 305570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:305206-305359:-1:exon

position:305206:-1
position: 305206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:305359:-1
position: 305359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:304963-305117:-1:exon

position:304963:-1
position: 304963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:305117:-1
position: 305117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:304666-304842:-1:exon

position:304666:-1
position: 304666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:304842:-1
position: 304842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:304133-304280:-1:exon

position:304133:-1
position: 304133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:304280:-1
position: 304280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:303881-304042:-1:exon

position:303881:-1
position: 303881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:304042:-1
position: 304042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:303683-303786:-1:exon

position:303683:-1
position: 303683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:303786:-1
position: 303786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:303352-303449:-1:exon

position:303352:-1
position: 303352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:303449:-1
position: 303449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:303141-303260:-1:exon

position:303141:-1
position: 303141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:303260:-1
position: 303260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:302949-303051:-1:exon

position:302949:-1
position: 302949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:303051:-1
position: 303051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:302663-302786:-1:exon

position:302663:-1
position: 302663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:302786:-1
position: 302786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:302392-302583:-1:exon

position:302392:-1
position: 302392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:302583:-1
position: 302583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:302189-302263:-1:exon

position:302189:-1
position: 302189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:302263:-1
position: 302263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:301961-302086:-1:exon

position:301961:-1
position: 301961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:302086:-1
position: 302086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:301689-301777:-1:exon

position:301689:-1
position: 301689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:301777:-1
position: 301777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:301431-301552:-1:exon

position:301431:-1
position: 301431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:301552:-1
position: 301552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:300776-301236:-1:exon

position:301236:-1
position: 301236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MOV10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: MOV10
product: Mov10 RISC complex RNA helicase, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_030292010.3
SIO_010081: MOV10
subclass of: SO_0000673
so part of: MOV10
location: complement(join(300776..301267,301431..301552,301689..301777,301961..302086,302189..302263,302392..302583,302663..302786,302949..303051,303141..303260,303352..303449,303683..303786,303881..304042,304133..304280,304666..304842,304963..305117,305206..305359,305448..305570,305755..305995,306073..306311,306394..306527,306623..306716,307418..307712))
location: region:300776-307712:-1
so has part: feature:307418-307712:-1:exon
so has part: feature:306623-306716:-1:exon
so has part: feature:306394-306527:-1:exon
so has part: feature:306073-306311:-1:exon
so has part: feature:305755-305995:-1:exon
so has part: feature:305448-305570:-1:exon
so has part: feature:305206-305359:-1:exon
so has part: feature:304963-305117:-1:exon
so has part: feature:304666-304842:-1:exon
so has part: feature:304133-304280:-1:exon
so has part: feature:303881-304042:-1:exon
so has part: feature:303683-303786:-1:exon
so has part: feature:303352-303449:-1:exon
so has part: feature:303141-303260:-1:exon
so has part: feature:302949-303051:-1:exon
so has part: feature:302663-302786:-1:exon
so has part: feature:302392-302583:-1:exon
so has part: feature:302189-302263:-1:exon
so has part: feature:301961-302086:-1:exon
so has part: feature:301689-301777:-1:exon
so has part: feature:301431-301552:-1:exon
so has part: feature:300776-301267:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:307418-307712:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:306623-306716:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:306394-306527:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:306073-306311:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:305755-305995:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:305448-305570:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:305206-305359:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:304963-305117:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:304666-304842:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:304133-304280:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:303881-304042:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:303683-303786:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:303352-303449:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:303141-303260:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:302949-303051:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:302663-302786:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:302392-302583:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:302189-302263:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:301961-302086:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:301689-301777:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:301431-301552:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:300776-301267:-1:exon

position:301267:-1
position: 301267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MOV10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: MOV10
product: Mov10 RISC complex RNA helicase, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_030292008.3
SIO_010081: MOV10
subclass of: SO_0000673
so part of: MOV10
location: complement(join(300776..301295,301431..301552,301689..301777,301961..302086,302189..302263,302392..302583,302663..302786,302949..303051,303141..303260,303352..303449,303683..303786,303881..304042,304133..304280,304666..304842,304963..305117,305206..305359,305448..305570,305755..305995,306073..306311,306394..306527,306623..306716,307418..307712))
location: region:300776-307712:-1
so has part: feature:307418-307712:-1:exon
so has part: feature:306623-306716:-1:exon
so has part: feature:306394-306527:-1:exon
so has part: feature:306073-306311:-1:exon
so has part: feature:305755-305995:-1:exon
so has part: feature:305448-305570:-1:exon
so has part: feature:305206-305359:-1:exon
so has part: feature:304963-305117:-1:exon
so has part: feature:304666-304842:-1:exon
so has part: feature:304133-304280:-1:exon
so has part: feature:303881-304042:-1:exon
so has part: feature:303683-303786:-1:exon
so has part: feature:303352-303449:-1:exon
so has part: feature:303141-303260:-1:exon
so has part: feature:302949-303051:-1:exon
so has part: feature:302663-302786:-1:exon
so has part: feature:302392-302583:-1:exon
so has part: feature:302189-302263:-1:exon
so has part: feature:301961-302086:-1:exon
so has part: feature:301689-301777:-1:exon
so has part: feature:301431-301552:-1:exon
so has part: feature:300776-301295:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:307418-307712:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:306623-306716:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:306394-306527:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:306073-306311:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:305755-305995:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:305448-305570:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:305206-305359:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:304963-305117:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:304666-304842:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:304133-304280:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:303881-304042:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:303683-303786:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:303352-303449:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:303141-303260:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:302949-303051:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:302663-302786:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:302392-302583:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:302189-302263:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:301961-302086:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:301689-301777:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:301431-301552:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:300776-301295:-1:exon

position:301295:-1
position: 301295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MOV10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: MOV10
product: Mov10 RISC complex RNA helicase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_030292009.3
SIO_010081: MOV10
subclass of: SO_0000673
so part of: MOV10
location: complement(join(300776..301307,301431..301552,301689..301777,301961..302086,302189..302263,302392..302583,302663..302786,302949..303051,303141..303260,303352..303449,303683..303786,303881..304042,304133..304280,304666..304842,304963..305117,305206..305359,305448..305570,305755..305995,306073..306311,306394..306527,306623..306716,307418..307712))
location: region:300776-307712:-1
so has part: feature:307418-307712:-1:exon
so has part: feature:306623-306716:-1:exon
so has part: feature:306394-306527:-1:exon
so has part: feature:306073-306311:-1:exon
so has part: feature:305755-305995:-1:exon
so has part: feature:305448-305570:-1:exon
so has part: feature:305206-305359:-1:exon
so has part: feature:304963-305117:-1:exon
so has part: feature:304666-304842:-1:exon
so has part: feature:304133-304280:-1:exon
so has part: feature:303881-304042:-1:exon
so has part: feature:303683-303786:-1:exon
so has part: feature:303352-303449:-1:exon
so has part: feature:303141-303260:-1:exon
so has part: feature:302949-303051:-1:exon
so has part: feature:302663-302786:-1:exon
so has part: feature:302392-302583:-1:exon
so has part: feature:302189-302263:-1:exon
so has part: feature:301961-302086:-1:exon
so has part: feature:301689-301777:-1:exon
so has part: feature:301431-301552:-1:exon
so has part: feature:300776-301307:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:307418-307712:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:306623-306716:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:306394-306527:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:306073-306311:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:305755-305995:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:305448-305570:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:305206-305359:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:304963-305117:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:304666-304842:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:304133-304280:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:303881-304042:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:303683-303786:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:303352-303449:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:303141-303260:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:302949-303051:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:302663-302786:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:302392-302583:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:302189-302263:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:301961-302086:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:301689-301777:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:301431-301552:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:300776-301307:-1:exon

position:301307:-1
position: 301307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MOV10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: MOV10
product: Mov10 RISC complex RNA helicase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_002190096.5
SIO_010081: MOV10
subclass of: SO_0000673
so part of: MOV10
location: complement(join(300776..301271,301431..301552,301689..301777,301961..302086,302189..302263,302392..302583,302663..302786,302949..303051,303141..303260,303352..303449,303683..303786,303881..304042,304133..304280,304666..304842,304963..305117,305206..305359,305448..305570,305755..305995,306073..306311,306394..306527,306623..306716,307418..307710))
location: region:300776-307710:-1
so has part: feature:307418-307710:-1:exon
so has part: feature:306623-306716:-1:exon
so has part: feature:306394-306527:-1:exon
so has part: feature:306073-306311:-1:exon
so has part: feature:305755-305995:-1:exon
so has part: feature:305448-305570:-1:exon
so has part: feature:305206-305359:-1:exon
so has part: feature:304963-305117:-1:exon
so has part: feature:304666-304842:-1:exon
so has part: feature:304133-304280:-1:exon
so has part: feature:303881-304042:-1:exon
so has part: feature:303683-303786:-1:exon
so has part: feature:303352-303449:-1:exon
so has part: feature:303141-303260:-1:exon
so has part: feature:302949-303051:-1:exon
so has part: feature:302663-302786:-1:exon
so has part: feature:302392-302583:-1:exon
so has part: feature:302189-302263:-1:exon
so has part: feature:301961-302086:-1:exon
so has part: feature:301689-301777:-1:exon
so has part: feature:301431-301552:-1:exon
so has part: feature:300776-301271:-1:exon

position:307710:-1
position: 307710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:307418-307710:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:306623-306716:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:306394-306527:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:306073-306311:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:305755-305995:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:305448-305570:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:305206-305359:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:304963-305117:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:304666-304842:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:304133-304280:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:303881-304042:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:303683-303786:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:303352-303449:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:303141-303260:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:302949-303051:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:302663-302786:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:302392-302583:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:302189-302263:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:301961-302086:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:301689-301777:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:301431-301552:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:300776-301271:-1:exon

position:301271:-1
position: 301271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MOV10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: MOV10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: helicase MOV-10
translation: MRRFTVAETSLWGHQFVQFLQDTGREQTSLRETLRTIYNQEFRGRTDAKTPNFSCILYALKTTQQVQVRGEVVKFKVKRRVVVADQYRRPRRNAQASVSTSAPGQQLSSTPQMPQSHGKQWAKRIRGKHGVEIISDCDQGNGNIRFAVVPGEPRTVTVLVQNCGTEVVTLQRFQPQQQSRELSFSDEQGAVQGQSLLLHPGGMYPIQVRCLTTCNGHFSALVVFEFTKEPGVSFSISRYVAAIAETQLAKDLGPSAPFQPYEASLQSLVTVITEDGIPPDSSLKNQLEREIPLGTYGYPKSLKDTILLGPNTSASSSWAAMRSLLEAPLQAENYQQKFQLLLHLEEIQMEVDIRRYDMQDVTMVQERALLVLNVPGVAENRPSLLRGDHLFAHLSSERDHSPLIRYKGYVHSVELERVRLGFSSKLQKKFVKNLKFDVTFTFNRLPLQVQHRAAVLAVRRGLFSLLFPSASCHKSLFSGPFQPRWFNRKLETNEEQCRAVTHIVTGVSRPAPYLIFGPPGTGKTVTMVEAIKQVWTCFRDARILACAPSNSAADLLCQCLIKDIAPRNVYRLIASSRNYREVPTDIMPCCNWDDEQSSYVYPSKENLRPYRIIITTLVTAGRLVSANFPPGFFSHVFIDECGHAVEPESVVAIAGLLAPMDEETNPNGGQLVLAGDPKQLGPVLTSPLAIQYGLGTSLLERLMLHNPLYKKSSGGYNPQFITKLLWNYRSHEAILRIPNELFYDNELKVCKSNGLDIRNVYCTWEELPKKGFPIIFHGVCGEDQREAKSPSFFNTAEIEVLVHYLKKLLQSRGKGGCPAVSPKEIGIISPYRKQVEKIRKAITSLDPHLQKLPDISQLKVGSVEEFQGQERLVILISTVRSCSTYLQFDQTFRLGFLKNPKRLNVAITRAKALLIVVGNPTVLSKDQHWCRFLRYCKEQGGYTGYPYEDEGTAEDRLANELQTLQLSA
SIO_010081: MOV10
subclass of: SO_0000673
so part of: MOV10
location: complement(join(301438..301552,301689..301777,301961..302086,302189..302263,302392..302583,302663..302786,302949..303051,303141..303260,303352..303449,303683..303786,303881..304042,304133..304280,304666..304842,304963..305117,305206..305359,305448..305570,305755..305995,306073..306311,306394..306527,306623..306716,307418..307551))
location: region:301438-307551:-1
so has part: feature:307418-307551:-1:exon
so has part: feature:306623-306716:-1:exon
so has part: feature:306394-306527:-1:exon
so has part: feature:306073-306311:-1:exon
so has part: feature:305755-305995:-1:exon
so has part: feature:305448-305570:-1:exon
so has part: feature:305206-305359:-1:exon
so has part: feature:304963-305117:-1:exon
so has part: feature:304666-304842:-1:exon
so has part: feature:304133-304280:-1:exon
so has part: feature:303881-304042:-1:exon
so has part: feature:303683-303786:-1:exon
so has part: feature:303352-303449:-1:exon
so has part: feature:303141-303260:-1:exon
so has part: feature:302949-303051:-1:exon
so has part: feature:302663-302786:-1:exon
so has part: feature:302392-302583:-1:exon
so has part: feature:302189-302263:-1:exon
so has part: feature:301961-302086:-1:exon
so has part: feature:301689-301777:-1:exon
so has part: feature:301438-301552:-1:exon

XP_030147868.1
type: Protein
SIO_000068: ncbiprotein

position:301438:-1
position: 301438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:307551:-1
position: 307551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:307418-307551:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:306623-306716:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:306394-306527:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:306073-306311:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:305755-305995:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:305448-305570:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:305206-305359:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:304963-305117:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:304666-304842:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:304133-304280:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:303881-304042:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:303683-303786:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:303352-303449:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:303141-303260:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:302949-303051:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:302663-302786:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:302392-302583:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:302189-302263:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:301961-302086:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:301689-301777:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:301438-301552:-1:exon

MOV10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: MOV10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: helicase MOV-10
translation: MRRFTVAETSLWGHQFVQFLQDTGREQTSLRETLRTIYNQEFRGRTDAKTPNFSCILYALKTTQQVQVRGEVVKFKVKRRVVVADQYRRPRRNAQASVSTSAPGQQLSSTPQMPQSHGKQWAKRIRGKHGVEIISDCDQGNGNIRFAVVPGEPRTVTVLVQNCGTEVVTLQRFQPQQQSRELSFSDEQGAVQGQSLLLHPGGMYPIQVRCLTTCNGHFSALVVFEFTKEPGVSFSISRYVAAIAETQLAKDLGPSAPFQPYEASLQSLVTVITEDGIPPDSSLKNQLEREIPLGTYGYPKSLKDTILLGPNTSASSSWAAMRSLLEAPLQAENYQQKFQLLLHLEEIQMEVDIRRYDMQDVTMVQERALLVLNVPGVAENRPSLLRGDHLFAHLSSERDHSPLIRYKGYVHSVELERVRLGFSSKLQKKFVKNLKFDVTFTFNRLPLQVQHRAAVLAVRRGLFSLLFPSASCHKSLFSGPFQPRWFNRKLETNEEQCRAVTHIVTGVSRPAPYLIFGPPGTGKTVTMVEAIKQVWTCFRDARILACAPSNSAADLLCQCLIKDIAPRNVYRLIASSRNYREVPTDIMPCCNWDDEQSSYVYPSKENLRPYRIIITTLVTAGRLVSANFPPGFFSHVFIDECGHAVEPESVVAIAGLLAPMDEETNPNGGQLVLAGDPKQLGPVLTSPLAIQYGLGTSLLERLMLHNPLYKKSSGGYNPQFITKLLWNYRSHEAILRIPNELFYDNELKVCKSNGLDIRNVYCTWEELPKKGFPIIFHGVCGEDQREAKSPSFFNTAEIEVLVHYLKKLLQSRGKGGCPAVSPKEIGIISPYRKQVEKIRKAITSLDPHLQKLPDISQLKVGSVEEFQGQERLVILISTVRSCSTYLQFDQTFRLGFLKNPKRLNVAITRAKALLIVVGNPTVLSKDQHWCRFLRYCKEQGGYTGYPYEDEGTAEDRLANELQTLQLSA
SIO_010081: MOV10
subclass of: SO_0000673
so part of: MOV10
location: complement(join(301438..301552,301689..301777,301961..302086,302189..302263,302392..302583,302663..302786,302949..303051,303141..303260,303352..303449,303683..303786,303881..304042,304133..304280,304666..304842,304963..305117,305206..305359,305448..305570,305755..305995,306073..306311,306394..306527,306623..306716,307418..307551))
location: region:301438-307551:-1
so has part: feature:307418-307551:-1:exon
so has part: feature:306623-306716:-1:exon
so has part: feature:306394-306527:-1:exon
so has part: feature:306073-306311:-1:exon
so has part: feature:305755-305995:-1:exon
so has part: feature:305448-305570:-1:exon
so has part: feature:305206-305359:-1:exon
so has part: feature:304963-305117:-1:exon
so has part: feature:304666-304842:-1:exon
so has part: feature:304133-304280:-1:exon
so has part: feature:303881-304042:-1:exon
so has part: feature:303683-303786:-1:exon
so has part: feature:303352-303449:-1:exon
so has part: feature:303141-303260:-1:exon
so has part: feature:302949-303051:-1:exon
so has part: feature:302663-302786:-1:exon
so has part: feature:302392-302583:-1:exon
so has part: feature:302189-302263:-1:exon
so has part: feature:301961-302086:-1:exon
so has part: feature:301689-301777:-1:exon
so has part: feature:301438-301552:-1:exon

XP_030147869.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:307418-307551:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:306623-306716:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:306394-306527:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:306073-306311:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:305755-305995:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:305448-305570:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:305206-305359:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:304963-305117:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:304666-304842:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:304133-304280:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:303881-304042:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:303683-303786:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:303352-303449:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:303141-303260:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:302949-303051:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:302663-302786:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:302392-302583:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:302189-302263:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:301961-302086:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:301689-301777:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:301438-301552:-1:exon

MOV10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: MOV10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: helicase MOV-10
translation: MRRFTVAETSLWGHQFVQFLQDTGREQTSLRETLRTIYNQEFRGRTDAKTPNFSCILYALKTTQQVQVRGEVVKFKVKRRVVVADQYRRPRRNAQASVSTSAPGQQLSSTPQMPQSHGKQWAKRIRGKHGVEIISDCDQGNGNIRFAVVPGEPRTVTVLVQNCGTEVVTLQRFQPQQQSRELSFSDEQGAVQGQSLLLHPGGMYPIQVRCLTTCNGHFSALVVFEFTKEPGVSFSISRYVAAIAETQLAKDLGPSAPFQPYEASLQSLVTVITEDGIPPDSSLKNQLEREIPLGTYGYPKSLKDTILLGPNTSASSSWAAMRSLLEAPLQAENYQQKFQLLLHLEEIQMEVDIRRYDMQDVTMVQERALLVLNVPGVAENRPSLLRGDHLFAHLSSERDHSPLIRYKGYVHSVELERVRLGFSSKLQKKFVKNLKFDVTFTFNRLPLQVQHRAAVLAVRRGLFSLLFPSASCHKSLFSGPFQPRWFNRKLETNEEQCRAVTHIVTGVSRPAPYLIFGPPGTGKTVTMVEAIKQVWTCFRDARILACAPSNSAADLLCQCLIKDIAPRNVYRLIASSRNYREVPTDIMPCCNWDDEQSSYVYPSKENLRPYRIIITTLVTAGRLVSANFPPGFFSHVFIDECGHAVEPESVVAIAGLLAPMDEETNPNGGQLVLAGDPKQLGPVLTSPLAIQYGLGTSLLERLMLHNPLYKKSSGGYNPQFITKLLWNYRSHEAILRIPNELFYDNELKVCKSNGLDIRNVYCTWEELPKKGFPIIFHGVCGEDQREAKSPSFFNTAEIEVLVHYLKKLLQSRGKGGCPAVSPKEIGIISPYRKQVEKIRKAITSLDPHLQKLPDISQLKVGSVEEFQGQERLVILISTVRSCSTYLQFDQTFRLGFLKNPKRLNVAITRAKALLIVVGNPTVLSKDQHWCRFLRYCKEQGGYTGYPYEDEGTAEDRLANELQTLQLSA
SIO_010081: MOV10
subclass of: SO_0000673
so part of: MOV10
location: complement(join(301438..301552,301689..301777,301961..302086,302189..302263,302392..302583,302663..302786,302949..303051,303141..303260,303352..303449,303683..303786,303881..304042,304133..304280,304666..304842,304963..305117,305206..305359,305448..305570,305755..305995,306073..306311,306394..306527,306623..306716,307418..307551))
location: region:301438-307551:-1
so has part: feature:307418-307551:-1:exon
so has part: feature:306623-306716:-1:exon
so has part: feature:306394-306527:-1:exon
so has part: feature:306073-306311:-1:exon
so has part: feature:305755-305995:-1:exon
so has part: feature:305448-305570:-1:exon
so has part: feature:305206-305359:-1:exon
so has part: feature:304963-305117:-1:exon
so has part: feature:304666-304842:-1:exon
so has part: feature:304133-304280:-1:exon
so has part: feature:303881-304042:-1:exon
so has part: feature:303683-303786:-1:exon
so has part: feature:303352-303449:-1:exon
so has part: feature:303141-303260:-1:exon
so has part: feature:302949-303051:-1:exon
so has part: feature:302663-302786:-1:exon
so has part: feature:302392-302583:-1:exon
so has part: feature:302189-302263:-1:exon
so has part: feature:301961-302086:-1:exon
so has part: feature:301689-301777:-1:exon
so has part: feature:301438-301552:-1:exon

XP_030147870.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:307418-307551:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:306623-306716:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:306394-306527:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:306073-306311:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:305755-305995:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:305448-305570:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:305206-305359:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:304963-305117:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:304666-304842:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:304133-304280:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:303881-304042:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:303683-303786:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:303352-303449:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:303141-303260:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:302949-303051:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:302663-302786:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:302392-302583:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:302189-302263:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:301961-302086:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:301689-301777:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:301438-301552:-1:exon

MOV10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: MOV10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: helicase MOV-10
translation: MRRFTVAETSLWGHQFVQFLQDTGREQTSLRETLRTIYNQEFRGRTDAKTPNFSCILYALKTTQQVQVRGEVVKFKVKRRVVVADQYRRPRRNAQASVSTSAPGQQLSSTPQMPQSHGKQWAKRIRGKHGVEIISDCDQGNGNIRFAVVPGEPRTVTVLVQNCGTEVVTLQRFQPQQQSRELSFSDEQGAVQGQSLLLHPGGMYPIQVRCLTTCNGHFSALVVFEFTKEPGVSFSISRYVAAIAETQLAKDLGPSAPFQPYEASLQSLVTVITEDGIPPDSSLKNQLEREIPLGTYGYPKSLKDTILLGPNTSASSSWAAMRSLLEAPLQAENYQQKFQLLLHLEEIQMEVDIRRYDMQDVTMVQERALLVLNVPGVAENRPSLLRGDHLFAHLSSERDHSPLIRYKGYVHSVELERVRLGFSSKLQKKFVKNLKFDVTFTFNRLPLQVQHRAAVLAVRRGLFSLLFPSASCHKSLFSGPFQPRWFNRKLETNEEQCRAVTHIVTGVSRPAPYLIFGPPGTGKTVTMVEAIKQVWTCFRDARILACAPSNSAADLLCQCLIKDIAPRNVYRLIASSRNYREVPTDIMPCCNWDDEQSSYVYPSKENLRPYRIIITTLVTAGRLVSANFPPGFFSHVFIDECGHAVEPESVVAIAGLLAPMDEETNPNGGQLVLAGDPKQLGPVLTSPLAIQYGLGTSLLERLMLHNPLYKKSSGGYNPQFITKLLWNYRSHEAILRIPNELFYDNELKVCKSNGLDIRNVYCTWEELPKKGFPIIFHGVCGEDQREAKSPSFFNTAEIEVLVHYLKKLLQSRGKGGCPAVSPKEIGIISPYRKQVEKIRKAITSLDPHLQKLPDISQLKVGSVEEFQGQERLVILISTVRSCSTYLQFDQTFRLGFLKNPKRLNVAITRAKALLIVVGNPTVLSKDQHWCRFLRYCKEQGGYTGYPYEDEGTAEDRLANELQTLQLSA
SIO_010081: MOV10
subclass of: SO_0000673
so part of: MOV10
location: complement(join(301438..301552,301689..301777,301961..302086,302189..302263,302392..302583,302663..302786,302949..303051,303141..303260,303352..303449,303683..303786,303881..304042,304133..304280,304666..304842,304963..305117,305206..305359,305448..305570,305755..305995,306073..306311,306394..306527,306623..306716,307418..307551))
location: region:301438-307551:-1
so has part: feature:307418-307551:-1:exon
so has part: feature:306623-306716:-1:exon
so has part: feature:306394-306527:-1:exon
so has part: feature:306073-306311:-1:exon
so has part: feature:305755-305995:-1:exon
so has part: feature:305448-305570:-1:exon
so has part: feature:305206-305359:-1:exon
so has part: feature:304963-305117:-1:exon
so has part: feature:304666-304842:-1:exon
so has part: feature:304133-304280:-1:exon
so has part: feature:303881-304042:-1:exon
so has part: feature:303683-303786:-1:exon
so has part: feature:303352-303449:-1:exon
so has part: feature:303141-303260:-1:exon
so has part: feature:302949-303051:-1:exon
so has part: feature:302663-302786:-1:exon
so has part: feature:302392-302583:-1:exon
so has part: feature:302189-302263:-1:exon
so has part: feature:301961-302086:-1:exon
so has part: feature:301689-301777:-1:exon
so has part: feature:301438-301552:-1:exon

XP_030147871.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:307418-307551:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:306623-306716:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:306394-306527:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:306073-306311:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:305755-305995:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:305448-305570:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:305206-305359:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:304963-305117:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:304666-304842:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:304133-304280:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:303881-304042:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:303683-303786:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:303352-303449:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:303141-303260:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:302949-303051:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:302663-302786:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:302392-302583:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:302189-302263:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:301961-302086:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:301689-301777:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:301438-301552:-1:exon

MOV10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: MOV10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: helicase MOV-10
translation: MRRFTVAETSLWGHQFVQFLQDTGREQTSLRETLRTIYNQEFRGRTDAKTPNFSCILYALKTTQQVQVRGEVVKFKVKRRVVVADQYRRPRRNAQASVSTSAPGQQLSSTPQMPQSHGKQWAKRIRGKHGVEIISDCDQGNGNIRFAVVPGEPRTVTVLVQNCGTEVVTLQRFQPQQQSRELSFSDEQGAVQGQSLLLHPGGMYPIQVRCLTTCNGHFSALVVFEFTKEPGVSFSISRYVAAIAETQLAKDLGPSAPFQPYEASLQSLVTVITEDGIPPDSSLKNQLEREIPLGTYGYPKSLKDTILLGPNTSASSSWAAMRSLLEAPLQAENYQQKFQLLLHLEEIQMEVDIRRYDMQDVTMVQERALLVLNVPGVAENRPSLLRGDHLFAHLSSERDHSPLIRYKGYVHSVELERVRLGFSSKLQKKFVKNLKFDVTFTFNRLPLQVQHRAAVLAVRRGLFSLLFPSASCHKSLFSGPFQPRWFNRKLETNEEQCRAVTHIVTGVSRPAPYLIFGPPGTGKTVTMVEAIKQVWTCFRDARILACAPSNSAADLLCQCLIKDIAPRNVYRLIASSRNYREVPTDIMPCCNWDDEQSSYVYPSKENLRPYRIIITTLVTAGRLVSANFPPGFFSHVFIDECGHAVEPESVVAIAGLLAPMDEETNPNGGQLVLAGDPKQLGPVLTSPLAIQYGLGTSLLERLMLHNPLYKKSSGGYNPQFITKLLWNYRSHEAILRIPNELFYDNELKVCKSNGLDIRNVYCTWEELPKKGFPIIFHGVCGEDQREAKSPSFFNTAEIEVLVHYLKKLLQSRGKGGCPAVSPKEIGIISPYRKQVEKIRKAITSLDPHLQKLPDISQLKVGSVEEFQGQERLVILISTVRSCSTYLQFDQTFRLGFLKNPKRLNVAITRAKALLIVVGNPTVLSKDQHWCRFLRYCKEQGGYTGYPYEDEGTAEDRLANELQTLQLSA
SIO_010081: MOV10
subclass of: SO_0000673
so part of: MOV10
location: complement(join(301438..301552,301689..301777,301961..302086,302189..302263,302392..302583,302663..302786,302949..303051,303141..303260,303352..303449,303683..303786,303881..304042,304133..304280,304666..304842,304963..305117,305206..305359,305448..305570,305755..305995,306073..306311,306394..306527,306623..306716,307418..307551))
location: region:301438-307551:-1
so has part: feature:307418-307551:-1:exon
so has part: feature:306623-306716:-1:exon
so has part: feature:306394-306527:-1:exon
so has part: feature:306073-306311:-1:exon
so has part: feature:305755-305995:-1:exon
so has part: feature:305448-305570:-1:exon
so has part: feature:305206-305359:-1:exon
so has part: feature:304963-305117:-1:exon
so has part: feature:304666-304842:-1:exon
so has part: feature:304133-304280:-1:exon
so has part: feature:303881-304042:-1:exon
so has part: feature:303683-303786:-1:exon
so has part: feature:303352-303449:-1:exon
so has part: feature:303141-303260:-1:exon
so has part: feature:302949-303051:-1:exon
so has part: feature:302663-302786:-1:exon
so has part: feature:302392-302583:-1:exon
so has part: feature:302189-302263:-1:exon
so has part: feature:301961-302086:-1:exon
so has part: feature:301689-301777:-1:exon
so has part: feature:301438-301552:-1:exon

XP_002190132.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:307418-307551:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:306623-306716:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:306394-306527:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:306073-306311:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:305755-305995:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:305448-305570:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:305206-305359:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:304963-305117:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:304666-304842:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:304133-304280:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:303881-304042:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:303683-303786:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:303352-303449:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:303141-303260:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:302949-303051:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:302663-302786:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:302392-302583:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:302189-302263:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:301961-302086:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:301689-301777:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:301438-301552:-1:exon

CAPZA1
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: CAPZA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(308580..320420)
location: region:308580-320420:-1
so has part: feature:308580-320420:-1:exon
subclass of: SO_0000010

100224610
type: Gene
SIO_000068: ncbigene

position:308580:-1
position: 308580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:320420:-1
position: 320420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:308580-320420:-1:exon

CAPZA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: CAPZA1
product: capping actin protein of muscle Z-line subunit alpha 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 38 ESTs, 7 long SRA reads, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 158 samples with support for all annotated introns
transcript id: XM_002191174.5
SIO_010081: CAPZA1
subclass of: SO_0000673
so part of: CAPZA1
location: complement(join(308580..310070,310667..310729,311885..311956,312452..312530,312961..313040,313414..313620,314914..314977,315797..315848,316092..316155,320264..320420))
location: region:308580-320420:-1
so has part: feature:320264-320420:-1:exon
so has part: feature:316092-316155:-1:exon
so has part: feature:315797-315848:-1:exon
so has part: feature:314914-314977:-1:exon
so has part: feature:313414-313620:-1:exon
so has part: feature:312961-313040:-1:exon
so has part: feature:312452-312530:-1:exon
so has part: feature:311885-311956:-1:exon
so has part: feature:310667-310729:-1:exon
so has part: feature:308580-310070:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:320264-320420:-1:exon

position:320264:-1
position: 320264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:316092-316155:-1:exon

position:316092:-1
position: 316092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:316155:-1
position: 316155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:315797-315848:-1:exon

position:315797:-1
position: 315797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:315848:-1
position: 315848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:314914-314977:-1:exon

position:314914:-1
position: 314914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:314977:-1
position: 314977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:313414-313620:-1:exon

position:313414:-1
position: 313414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:313620:-1
position: 313620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:312961-313040:-1:exon

position:312961:-1
position: 312961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:313040:-1
position: 313040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:312452-312530:-1:exon

position:312452:-1
position: 312452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:312530:-1
position: 312530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:311885-311956:-1:exon

position:311885:-1
position: 311885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:311956:-1
position: 311956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:310667-310729:-1:exon

position:310667:-1
position: 310667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:310729:-1
position: 310729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:308580-310070:-1:exon

position:310070:-1
position: 310070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CAPZA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: CAPZA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-actin-capping protein subunit alpha-1
translation: MADLDERVSDEEKVRIAAKFITHAPPGEFNEVFNDVRLLLNNDNLLREGAAHAFAQYNMDQFTPVKIEGYDDQVLITEHGDLGNGRFLDPRNKLSFKFDHLRKEASDPQPEDTESALKQWRDACDSALRAYVKDHYPNGFCTVYGKSIDGQQTIIACIESHQFQPKNFWNGRWRSEWKFTITPPTAQVAAVLKIQVHYYEDGNVQLVSHKDIQDSVQVSSDVQTAKDFIKIIENAENEYQTAISENYQTMSDTTFKALRRQLPVTRTKIDWNKILSYKIGKEMQNA
SIO_010081: CAPZA1
subclass of: SO_0000673
so part of: CAPZA1
location: complement(join(309930..310070,310667..310729,311885..311956,312452..312530,312961..313040,313414..313620,314914..314977,315797..315848,316092..316155,320264..320302))
location: region:309930-320302:-1
so has part: feature:320264-320302:-1:exon
so has part: feature:316092-316155:-1:exon
so has part: feature:315797-315848:-1:exon
so has part: feature:314914-314977:-1:exon
so has part: feature:313414-313620:-1:exon
so has part: feature:312961-313040:-1:exon
so has part: feature:312452-312530:-1:exon
so has part: feature:311885-311956:-1:exon
so has part: feature:310667-310729:-1:exon
so has part: feature:309930-310070:-1:exon

XP_002191210.1
type: Protein
SIO_000068: ncbiprotein

position:309930:-1
position: 309930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:320302:-1
position: 320302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:320264-320302:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:316092-316155:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:315797-315848:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:314914-314977:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:313414-313620:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:312961-313040:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:312452-312530:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:311885-311956:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:310667-310729:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:309930-310070:-1:exon

ST7L
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: ST7L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 320618..343010
location: region:320618-343010:1
so has part: feature:320618-343010:1:exon
subclass of: SO_0000010

100220761
type: Gene
SIO_000068: ncbigene

position:320618:1
position: 320618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:343010:1
position: 343010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:320618-343010:1:exon

ST7L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: ST7L
product: suppression of tumorigenicity 7 like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 1 long SRA read, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 73 samples with support for all annotated introns
transcript id: XM_030292012.3
SIO_010081: ST7L
subclass of: SO_0000673
so part of: ST7L
location: join(320618..320801,322352..322434,323278..323437,323945..323999,324527..324642,326508..326586,327380..327534,327622..327719,328134..328248,329995..330067,330778..330880,333990..334140,334280..334372,336954..337093,342200..342268,342483..343010)
location: region:320618-343010:1
so has part: feature:320618-320801:1:exon
so has part: feature:322352-322434:1:exon
so has part: feature:323278-323437:1:exon
so has part: feature:323945-323999:1:exon
so has part: feature:324527-324642:1:exon
so has part: feature:326508-326586:1:exon
so has part: feature:327380-327534:1:exon
so has part: feature:327622-327719:1:exon
so has part: feature:328134-328248:1:exon
so has part: feature:329995-330067:1:exon
so has part: feature:330778-330880:1:exon
so has part: feature:333990-334140:1:exon
so has part: feature:334280-334372:1:exon
so has part: feature:336954-337093:1:exon
so has part: feature:342200-342268:1:exon
so has part: feature:342483-343010:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:320618-320801:1:exon

position:320801:1
position: 320801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:322352-322434:1:exon

position:322352:1
position: 322352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:322434:1
position: 322434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:323278-323437:1:exon

position:323278:1
position: 323278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:323437:1
position: 323437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:323945-323999:1:exon

position:323945:1
position: 323945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:323999:1
position: 323999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:324527-324642:1:exon

position:324527:1
position: 324527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:324642:1
position: 324642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:326508-326586:1:exon

position:326508:1
position: 326508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:326586:1
position: 326586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:327380-327534:1:exon

position:327380:1
position: 327380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:327534:1
position: 327534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:327622-327719:1:exon

position:327622:1
position: 327622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:327719:1
position: 327719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:328134-328248:1:exon

position:328134:1
position: 328134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:328248:1
position: 328248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:329995-330067:1:exon

position:329995:1
position: 329995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:330067:1
position: 330067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:330778-330880:1:exon

position:330778:1
position: 330778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:330880:1
position: 330880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:333990-334140:1:exon

position:333990:1
position: 333990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:334140:1
position: 334140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:334280-334372:1:exon

position:334280:1
position: 334280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:334372:1
position: 334372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:336954-337093:1:exon

position:336954:1
position: 336954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:337093:1
position: 337093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:342200-342268:1:exon

position:342200:1
position: 342200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:342268:1
position: 342268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:342483-343010:1:exon

position:342483:1
position: 342483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ST7L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: ST7L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: suppressor of tumorigenicity 7 protein-like isoform X2
translation: MLSAGRRRGATITGTGRLFAAGNTALAEPRSLRGSRCGVGDERYLRAWPWSGSDGAVTVFLSTLTPKFYFALTVTSSFISGLIFVFEWWHFRKYGTSFIEQVSVSHLRPLIGGAESSPPAPAAFLAGENDTSRQNMPECKVWRNPLNLFRGAEYSRYMWVTGKEPLTYYDMNLSAQDHQTFFTCDTDALRPSDTVMQKAWRERNPQARIKAAYQALELNNDCATAYVLLAEEEATTIVDAEKYFKQALKAGEMIYRKSQNCHSQSPQHEAQLRRDTNVLVYVKRRLAMCARKLGRIREAVKMMRDLMKEFPLLSMLNIHENLLEALLELQAYADVQAVLAKYDDISLPKSAAICYTAALLKARAVSERFSPETASKRGLSTAEINAVEAIHRAVEFNPHVPKYLLEMKSLVLPPEHILKRGDSEAVAYAFFHLQHWKRIEGALNLLHCTWEGTFRMIPYPLEKGHLFYPYPSCTETADRELLPTFHEVSVYPQKELPFFIHFTAGLCSFSAMLALLTHQFPELMVIFAKAVLRVLWPVSAPSVLASS
SIO_010081: ST7L
subclass of: SO_0000673
so part of: ST7L
location: join(320633..320801,322352..322434,323278..323437,323945..323999,324527..324642,326508..326586,327380..327534,327622..327719,328134..328248,329995..330067,330778..330880,333990..334140,334280..334372,336954..337093,342200..342253)
location: region:320633-342253:1
so has part: feature:320633-320801:1:exon
so has part: feature:322352-322434:1:exon
so has part: feature:323278-323437:1:exon
so has part: feature:323945-323999:1:exon
so has part: feature:324527-324642:1:exon
so has part: feature:326508-326586:1:exon
so has part: feature:327380-327534:1:exon
so has part: feature:327622-327719:1:exon
so has part: feature:328134-328248:1:exon
so has part: feature:329995-330067:1:exon
so has part: feature:330778-330880:1:exon
so has part: feature:333990-334140:1:exon
so has part: feature:334280-334372:1:exon
so has part: feature:336954-337093:1:exon
so has part: feature:342200-342253:1:exon

XP_030147872.1
type: Protein
SIO_000068: ncbiprotein

position:320633:1
position: 320633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:342253:1
position: 342253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:320633-320801:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:322352-322434:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:323278-323437:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:323945-323999:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:324527-324642:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:326508-326586:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:327380-327534:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:327622-327719:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:328134-328248:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:329995-330067:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:330778-330880:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:333990-334140:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:334280-334372:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:336954-337093:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:342200-342253:1:exon

ST7L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: ST7L
product: suppression of tumorigenicity 7 like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 39 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 120 samples with support for all annotated introns
transcript id: XM_002190071.4
SIO_010081: ST7L
subclass of: SO_0000673
so part of: ST7L
location: join(320865..321093,322352..322434,323278..323437,323945..323999,324527..324642,326508..326586,327380..327534,327622..327719,328134..328248,329995..330067,330778..330880,333990..334140,334280..334372,336954..337093,342200..342268,342483..343010)
location: region:320865-343010:1
so has part: feature:320865-321093:1:exon
so has part: feature:322352-322434:1:exon
so has part: feature:323278-323437:1:exon
so has part: feature:323945-323999:1:exon
so has part: feature:324527-324642:1:exon
so has part: feature:326508-326586:1:exon
so has part: feature:327380-327534:1:exon
so has part: feature:327622-327719:1:exon
so has part: feature:328134-328248:1:exon
so has part: feature:329995-330067:1:exon
so has part: feature:330778-330880:1:exon
so has part: feature:333990-334140:1:exon
so has part: feature:334280-334372:1:exon
so has part: feature:336954-337093:1:exon
so has part: feature:342200-342268:1:exon
so has part: feature:342483-343010:1:exon

position:320865:1
position: 320865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:320865-321093:1:exon

position:321093:1
position: 321093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:322352-322434:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:323278-323437:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:323945-323999:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:324527-324642:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:326508-326586:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:327380-327534:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:327622-327719:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:328134-328248:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:329995-330067:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:330778-330880:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:333990-334140:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:334280-334372:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:336954-337093:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:342200-342268:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:342483-343010:1:exon

ST7L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: ST7L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: suppressor of tumorigenicity 7 protein-like isoform X1
translation: MAEGSGGSGGSGGSGRGPPCPGAASAFRRWEQLRRRAATPWARGLLAAAAGLGLLYAVLRVPLRLRDGLAAVTVFLSTLTPKFYFALTVTSSFISGLIFVFEWWHFRKYGTSFIEQVSVSHLRPLIGGAESSPPAPAAFLAGENDTSRQNMPECKVWRNPLNLFRGAEYSRYMWVTGKEPLTYYDMNLSAQDHQTFFTCDTDALRPSDTVMQKAWRERNPQARIKAAYQALELNNDCATAYVLLAEEEATTIVDAEKYFKQALKAGEMIYRKSQNCHSQSPQHEAQLRRDTNVLVYVKRRLAMCARKLGRIREAVKMMRDLMKEFPLLSMLNIHENLLEALLELQAYADVQAVLAKYDDISLPKSAAICYTAALLKARAVSERFSPETASKRGLSTAEINAVEAIHRAVEFNPHVPKYLLEMKSLVLPPEHILKRGDSEAVAYAFFHLQHWKRIEGALNLLHCTWEGTFRMIPYPLEKGHLFYPYPSCTETADRELLPTFHEVSVYPQKELPFFIHFTAGLCSFSAMLALLTHQFPELMVIFAKAVLRVLWPVSAPSVLASS
SIO_010081: ST7L
subclass of: SO_0000673
so part of: ST7L
location: join(320880..321093,322352..322434,323278..323437,323945..323999,324527..324642,326508..326586,327380..327534,327622..327719,328134..328248,329995..330067,330778..330880,333990..334140,334280..334372,336954..337093,342200..342253)
location: region:320880-342253:1
so has part: feature:320880-321093:1:exon
so has part: feature:322352-322434:1:exon
so has part: feature:323278-323437:1:exon
so has part: feature:323945-323999:1:exon
so has part: feature:324527-324642:1:exon
so has part: feature:326508-326586:1:exon
so has part: feature:327380-327534:1:exon
so has part: feature:327622-327719:1:exon
so has part: feature:328134-328248:1:exon
so has part: feature:329995-330067:1:exon
so has part: feature:330778-330880:1:exon
so has part: feature:333990-334140:1:exon
so has part: feature:334280-334372:1:exon
so has part: feature:336954-337093:1:exon
so has part: feature:342200-342253:1:exon

XP_002190107.4
type: Protein
SIO_000068: ncbiprotein

position:320880:1
position: 320880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:320880-321093:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:322352-322434:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:323278-323437:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:323945-323999:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:324527-324642:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:326508-326586:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:327380-327534:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:327622-327719:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:328134-328248:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:329995-330067:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:330778-330880:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:333990-334140:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:334280-334372:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:336954-337093:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:342200-342253:1:exon

WNT2B
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: WNT2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(346384..363728)
location: region:346384-363728:-1
so has part: feature:346384-363728:-1:exon
subclass of: SO_0000010

100227493
type: Gene
SIO_000068: ncbigene

position:346384:-1
position: 346384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:363728:-1
position: 363728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:346384-363728:-1:exon

WNT2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: WNT2B
product: Wnt family member 2B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 1 EST, 76 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_030292055.3
SIO_010081: WNT2B
subclass of: SO_0000673
so part of: WNT2B
location: complement(join(346384..348911,349921..350185,350587..350864,352341..352561,363363..363728))
location: region:346384-363728:-1
so has part: feature:363363-363728:-1:exon
so has part: feature:352341-352561:-1:exon
so has part: feature:350587-350864:-1:exon
so has part: feature:349921-350185:-1:exon
so has part: feature:346384-348911:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:363363-363728:-1:exon

position:363363:-1
position: 363363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:352341-352561:-1:exon

position:352341:-1
position: 352341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:352561:-1
position: 352561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:350587-350864:-1:exon

position:350587:-1
position: 350587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:350864:-1
position: 350864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:349921-350185:-1:exon

position:349921:-1
position: 349921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:350185:-1
position: 350185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:346384-348911:-1:exon

position:348911:-1
position: 348911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

WNT2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: WNT2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Wnt-2b
translation: MLSPNRLEASPGIAVAPGRAECGAFPRTAGAAPRLCLPLVLLLLALTPRADSSWWYIGALGARVICDNIPGLVNKQRQLCQRYPDIMQSVGEGAKEWIRECQHQFRHHRWNCSTLDRDHTVFGRVMLRSSREAAFVYAISSAGVVYAITRACSQGDLKVCSCDPLKRGRSKDERGEFDWGGCSDNINYGIRFAKAFVDAKEKKVKDARALMNLHNNRCGRMAVKRFLKLECKCHGVSGSCTLRTCWLAMSDFRKTGDYLRRKYNGAIQVTMNQDGTGFTVANKNFRKPTKTDLVYFENSPDYCVMDKSAGSLGTAGRVCNKASRGTDGCEVMCCGRGYDTTRVTRVTKCECKFHWCCAVRCKECEDTVDVHTCKAPKRAEWLDQT
SIO_010081: WNT2B
subclass of: SO_0000673
so part of: WNT2B
location: complement(join(348682..348911,349921..350185,350587..350864,352341..352561,363363..363526))
location: region:348682-363526:-1
so has part: feature:363363-363526:-1:exon
so has part: feature:352341-352561:-1:exon
so has part: feature:350587-350864:-1:exon
so has part: feature:349921-350185:-1:exon
so has part: feature:348682-348911:-1:exon

XP_030147915.1
type: Protein
SIO_000068: ncbiprotein

position:348682:-1
position: 348682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:363526:-1
position: 363526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:363363-363526:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:352341-352561:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:350587-350864:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:349921-350185:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:348682-348911:-1:exon

CTTNBP2NL
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: CTTNBP2NL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(390925..410049)
location: region:390925-410049:-1
so has part: feature:390925-410049:-1:exon
subclass of: SO_0000010

115498557
type: Gene
SIO_000068: ncbigene

position:390925:-1
position: 390925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:410049:-1
position: 410049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:390925-410049:-1:exon

CTTNBP2NL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: CTTNBP2NL
product: CTTNBP2 N-terminal like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 3 long SRA reads, 7 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
transcript id: XM_030291896.3
SIO_010081: CTTNBP2NL
subclass of: SO_0000673
so part of: CTTNBP2NL
location: complement(join(390925..394892,395621..395728,397044..397274,405718..405825,409998..410049))
location: region:390925-410049:-1
so has part: feature:409998-410049:-1:exon
so has part: feature:405718-405825:-1:exon
so has part: feature:397044-397274:-1:exon
so has part: feature:395621-395728:-1:exon
so has part: feature:390925-394892:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:409998-410049:-1:exon

position:409998:-1
position: 409998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:405718-405825:-1:exon

position:405718:-1
position: 405718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:405825:-1
position: 405825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:397044-397274:-1:exon

position:397044:-1
position: 397044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:397274:-1
position: 397274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:395621-395728:-1:exon

position:395621:-1
position: 395621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:395728:-1
position: 395728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:390925-394892:-1:exon

position:394892:-1
position: 394892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CTTNBP2NL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: CTTNBP2NL
product: CTTNBP2 N-terminal like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 8 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 43 samples with support for all annotated introns
transcript id: XM_030291899.3
SIO_010081: CTTNBP2NL
subclass of: SO_0000673
so part of: CTTNBP2NL
location: complement(join(390925..394892,395621..395728,397044..397274,405718..405825,409850..409970))
location: region:390925-409970:-1
so has part: feature:409850-409970:-1:exon
so has part: feature:405718-405825:-1:exon
so has part: feature:397044-397274:-1:exon
so has part: feature:395621-395728:-1:exon
so has part: feature:390925-394892:-1:exon

position:409970:-1
position: 409970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:409850-409970:-1:exon

position:409850:-1
position: 409850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:405718-405825:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:397044-397274:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:395621-395728:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:390925-394892:-1:exon

CTTNBP2NL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: CTTNBP2NL
product: CTTNBP2 N-terminal like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_030291898.3
SIO_010081: CTTNBP2NL
subclass of: SO_0000673
so part of: CTTNBP2NL
location: complement(join(390925..394892,395621..395728,397044..397274,405718..405825,409117..409416))
location: region:390925-409416:-1
so has part: feature:409117-409416:-1:exon
so has part: feature:405718-405825:-1:exon
so has part: feature:397044-397274:-1:exon
so has part: feature:395621-395728:-1:exon
so has part: feature:390925-394892:-1:exon

position:409416:-1
position: 409416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:409117-409416:-1:exon

position:409117:-1
position: 409117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:405718-405825:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:397044-397274:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:395621-395728:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:390925-394892:-1:exon

CTTNBP2NL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: CTTNBP2NL
product: CTTNBP2 N-terminal like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_030291897.3
SIO_010081: CTTNBP2NL
subclass of: SO_0000673
so part of: CTTNBP2NL
location: complement(join(390925..394892,395621..395728,397044..397274,399238..401632))
location: region:390925-401632:-1
so has part: feature:399238-401632:-1:exon
so has part: feature:397044-397274:-1:exon
so has part: feature:395621-395728:-1:exon
so has part: feature:390925-394892:-1:exon

position:401632:-1
position: 401632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:399238-401632:-1:exon

position:399238:-1
position: 399238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:397044-397274:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:395621-395728:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:390925-394892:-1:exon

CTTNBP2NL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: CTTNBP2NL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CTTNBP2 N-terminal-like protein isoform X1
translation: MNLEKLSKPELLTLFSILEGELEARDLVIEALKAQHRDTFIEERYGKYNISDPLMALQRDFETLKEGNHGEKQPVCSNPLSILKVVMKHCKNMQERMLSQLAAAESRHRKVILDLEEERQRHAQDTAEGDDVTYMLEKERERLTQQVEFEKSQVKKFEKEQKKLSSQLEEERARHKQLSSMLVVECKKATAKAAEEGQKTAELSLKLEKEKSKVSKLEEELAAKRKRGLQMEAQVEKQLSEFDIEREQLKAKLNREENRTKALKEEVECLKKALKELEASCQEHSPSKPVHPSPSVTSRGVTTDSPPMKSVSCQTESLQAERANPASTSKAVHTMFASPPTPAHSYAKSNGHCDTDVQMGGETNAAESQVHREKSAAAAESAVENGSSPVRTESPVHLMSQLPSAGASLSPGSTAASSLTPSPCSSPVLTKRLVGASASSPGYQSSYQVGINQRFHAARHKFQSQAEQEHQPGGLQSPPSRDLSPTLADNSAAKQLARNTVTQVLSRFTSQQGPIKPVSPNSSPFGTDYRNLANAGSPKTDSGHCPSPVKVSSPLSPLSPGIKSPTIPRAERGNPPPIPPKKPGLAQSPAAPAPLTKTSSQASSLGAPMDVASSCSNNSVVSNGKDLEILLPSSS
SIO_010081: CTTNBP2NL
subclass of: SO_0000673
so part of: CTTNBP2NL
location: complement(join(393423..394892,395621..395728,397044..397274,405718..405816))
location: region:393423-405816:-1
so has part: feature:405718-405816:-1:exon
so has part: feature:397044-397274:-1:exon
so has part: feature:395621-395728:-1:exon
so has part: feature:393423-394892:-1:exon

XP_030147756.1
type: Protein
SIO_000068: ncbiprotein

position:393423:-1
position: 393423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:405816:-1
position: 405816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:405718-405816:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:397044-397274:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:395621-395728:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:393423-394892:-1:exon

CTTNBP2NL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: CTTNBP2NL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CTTNBP2 N-terminal-like protein isoform X1
translation: MNLEKLSKPELLTLFSILEGELEARDLVIEALKAQHRDTFIEERYGKYNISDPLMALQRDFETLKEGNHGEKQPVCSNPLSILKVVMKHCKNMQERMLSQLAAAESRHRKVILDLEEERQRHAQDTAEGDDVTYMLEKERERLTQQVEFEKSQVKKFEKEQKKLSSQLEEERARHKQLSSMLVVECKKATAKAAEEGQKTAELSLKLEKEKSKVSKLEEELAAKRKRGLQMEAQVEKQLSEFDIEREQLKAKLNREENRTKALKEEVECLKKALKELEASCQEHSPSKPVHPSPSVTSRGVTTDSPPMKSVSCQTESLQAERANPASTSKAVHTMFASPPTPAHSYAKSNGHCDTDVQMGGETNAAESQVHREKSAAAAESAVENGSSPVRTESPVHLMSQLPSAGASLSPGSTAASSLTPSPCSSPVLTKRLVGASASSPGYQSSYQVGINQRFHAARHKFQSQAEQEHQPGGLQSPPSRDLSPTLADNSAAKQLARNTVTQVLSRFTSQQGPIKPVSPNSSPFGTDYRNLANAGSPKTDSGHCPSPVKVSSPLSPLSPGIKSPTIPRAERGNPPPIPPKKPGLAQSPAAPAPLTKTSSQASSLGAPMDVASSCSNNSVVSNGKDLEILLPSSS
SIO_010081: CTTNBP2NL
subclass of: SO_0000673
so part of: CTTNBP2NL
location: complement(join(393423..394892,395621..395728,397044..397274,405718..405816))
location: region:393423-405816:-1
so has part: feature:405718-405816:-1:exon
so has part: feature:397044-397274:-1:exon
so has part: feature:395621-395728:-1:exon
so has part: feature:393423-394892:-1:exon

XP_030147759.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:405718-405816:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:397044-397274:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:395621-395728:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:393423-394892:-1:exon

CTTNBP2NL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: CTTNBP2NL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CTTNBP2 N-terminal-like protein isoform X1
translation: MNLEKLSKPELLTLFSILEGELEARDLVIEALKAQHRDTFIEERYGKYNISDPLMALQRDFETLKEGNHGEKQPVCSNPLSILKVVMKHCKNMQERMLSQLAAAESRHRKVILDLEEERQRHAQDTAEGDDVTYMLEKERERLTQQVEFEKSQVKKFEKEQKKLSSQLEEERARHKQLSSMLVVECKKATAKAAEEGQKTAELSLKLEKEKSKVSKLEEELAAKRKRGLQMEAQVEKQLSEFDIEREQLKAKLNREENRTKALKEEVECLKKALKELEASCQEHSPSKPVHPSPSVTSRGVTTDSPPMKSVSCQTESLQAERANPASTSKAVHTMFASPPTPAHSYAKSNGHCDTDVQMGGETNAAESQVHREKSAAAAESAVENGSSPVRTESPVHLMSQLPSAGASLSPGSTAASSLTPSPCSSPVLTKRLVGASASSPGYQSSYQVGINQRFHAARHKFQSQAEQEHQPGGLQSPPSRDLSPTLADNSAAKQLARNTVTQVLSRFTSQQGPIKPVSPNSSPFGTDYRNLANAGSPKTDSGHCPSPVKVSSPLSPLSPGIKSPTIPRAERGNPPPIPPKKPGLAQSPAAPAPLTKTSSQASSLGAPMDVASSCSNNSVVSNGKDLEILLPSSS
SIO_010081: CTTNBP2NL
subclass of: SO_0000673
so part of: CTTNBP2NL
location: complement(join(393423..394892,395621..395728,397044..397274,405718..405816))
location: region:393423-405816:-1
so has part: feature:405718-405816:-1:exon
so has part: feature:397044-397274:-1:exon
so has part: feature:395621-395728:-1:exon
so has part: feature:393423-394892:-1:exon

XP_030147758.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:405718-405816:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:397044-397274:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:395621-395728:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:393423-394892:-1:exon

CTTNBP2NL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: CTTNBP2NL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CTTNBP2 N-terminal-like protein isoform X2
translation: MEKIFWVGFFMPLVKAQHRDTFIEERYGKYNISDPLMALQRDFETLKEGNHGEKQPVCSNPLSILKVVMKHCKNMQERMLSQLAAAESRHRKVILDLEEERQRHAQDTAEGDDVTYMLEKERERLTQQVEFEKSQVKKFEKEQKKLSSQLEEERARHKQLSSMLVVECKKATAKAAEEGQKTAELSLKLEKEKSKVSKLEEELAAKRKRGLQMEAQVEKQLSEFDIEREQLKAKLNREENRTKALKEEVECLKKALKELEASCQEHSPSKPVHPSPSVTSRGVTTDSPPMKSVSCQTESLQAERANPASTSKAVHTMFASPPTPAHSYAKSNGHCDTDVQMGGETNAAESQVHREKSAAAAESAVENGSSPVRTESPVHLMSQLPSAGASLSPGSTAASSLTPSPCSSPVLTKRLVGASASSPGYQSSYQVGINQRFHAARHKFQSQAEQEHQPGGLQSPPSRDLSPTLADNSAAKQLARNTVTQVLSRFTSQQGPIKPVSPNSSPFGTDYRNLANAGSPKTDSGHCPSPVKVSSPLSPLSPGIKSPTIPRAERGNPPPIPPKKPGLAQSPAAPAPLTKTSSQASSLGAPMDVASSCSNNSVVSNGKDLEILLPSSS
SIO_010081: CTTNBP2NL
subclass of: SO_0000673
so part of: CTTNBP2NL
location: complement(join(393423..394892,395621..395728,397044..397274,399238..399282))
location: region:393423-399282:-1
so has part: feature:399238-399282:-1:exon
so has part: feature:397044-397274:-1:exon
so has part: feature:395621-395728:-1:exon
so has part: feature:393423-394892:-1:exon

XP_030147757.1
type: Protein
SIO_000068: ncbiprotein

position:399282:-1
position: 399282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:399238-399282:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:397044-397274:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:395621-395728:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:393423-394892:-1:exon

LOC115498546
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC115498546
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(486904..488587)
location: region:486904-488587:-1
so has part: feature:486904-488587:-1:exon
subclass of: SO_0000011

115498546
type: Gene
SIO_000068: ncbigene

position:486904:-1
position: 486904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:488587:-1
position: 488587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:486904-488587:-1:exon

LOC115498546
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC115498546
product: uncharacterized LOC115498546
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XR_003963835.3
SIO_010081: LOC115498546
subclass of: SO_0000673
so part of: LOC115498546
location: complement(join(486904..487085,487498..488587))
location: region:486904-488587:-1
so has part: feature:487498-488587:-1:exon
so has part: feature:486904-487085:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:487498-488587:-1:exon

position:487498:-1
position: 487498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:486904-487085:-1:exon

position:487085:-1
position: 487085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KCND3
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: KCND3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 488791..578349
location: region:488791-578349:1
so has part: feature:488791-578349:1:exon
subclass of: SO_0000010

100222695
type: Gene
SIO_000068: ncbigene

position:488791:1
position: 488791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:578349:1
position: 578349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:488791-578349:1:exon

KCND3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: KCND3
product: potassium voltage-gated channel subfamily D member 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 1 EST, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_030291785.3
SIO_010081: KCND3
subclass of: SO_0000673
so part of: KCND3
location: join(488791..489057,494274..495458,556351..556513,567104..567205,572662..572754,575146..575202,576120..576367,578094..578349)
location: region:488791-578349:1
so has part: feature:488791-489057:1:exon
so has part: feature:494274-495458:1:exon
so has part: feature:556351-556513:1:exon
so has part: feature:567104-567205:1:exon
so has part: feature:572662-572754:1:exon
so has part: feature:575146-575202:1:exon
so has part: feature:576120-576367:1:exon
so has part: feature:578094-578349:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:488791-489057:1:exon

position:489057:1
position: 489057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:494274-495458:1:exon

position:494274:1
position: 494274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:495458:1
position: 495458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:556351-556513:1:exon

position:556351:1
position: 556351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:556513:1
position: 556513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:567104-567205:1:exon

position:567104:1
position: 567104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:567205:1
position: 567205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:572662-572754:1:exon

position:572662:1
position: 572662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:572754:1
position: 572754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:575146-575202:1:exon

position:575146:1
position: 575146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:575202:1
position: 575202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:576120-576367:1:exon

position:576120:1
position: 576120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:576367:1
position: 576367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:578094-578349:1:exon

position:578094:1
position: 578094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

KCND3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: KCND3
product: potassium voltage-gated channel subfamily D member 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 48 samples with support for all annotated introns
transcript id: XM_030291790.3
SIO_010081: KCND3
subclass of: SO_0000673
so part of: KCND3
location: join(488792..489057,494274..495458,556351..556513,567104..567205,572662..572754,576120..576367,578094..578348)
location: region:488792-578348:1
so has part: feature:488792-489057:1:exon
so has part: feature:494274-495458:1:exon
so has part: feature:556351-556513:1:exon
so has part: feature:567104-567205:1:exon
so has part: feature:572662-572754:1:exon
so has part: feature:576120-576367:1:exon
so has part: feature:578094-578348:1:exon

position:488792:1
position: 488792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:578348:1
position: 578348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:488792-489057:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:494274-495458:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:556351-556513:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:567104-567205:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:572662-572754:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:576120-576367:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:578094-578348:1:exon

KCND3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: KCND3
product: potassium voltage-gated channel subfamily D member 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 1 EST, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_041721271.1
SIO_010081: KCND3
subclass of: SO_0000673
so part of: KCND3
location: join(489402..489721,494274..495458,556351..556513,567104..567205,572662..572754,575146..575202,576120..576367,578094..578349)
location: region:489402-578349:1
so has part: feature:489402-489721:1:exon
so has part: feature:494274-495458:1:exon
so has part: feature:556351-556513:1:exon
so has part: feature:567104-567205:1:exon
so has part: feature:572662-572754:1:exon
so has part: feature:575146-575202:1:exon
so has part: feature:576120-576367:1:exon
so has part: feature:578094-578349:1:exon

position:489402:1
position: 489402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:489402-489721:1:exon

position:489721:1
position: 489721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:494274-495458:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:556351-556513:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:567104-567205:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:572662-572754:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:575146-575202:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:576120-576367:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:578094-578349:1:exon

KCND3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: KCND3
product: potassium voltage-gated channel subfamily D member 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 1 EST, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_041721272.1
SIO_010081: KCND3
subclass of: SO_0000673
so part of: KCND3
location: join(489843..490507,494274..495458,556351..556513,567104..567205,572662..572754,575146..575202,576120..576367,578094..578349)
location: region:489843-578349:1
so has part: feature:489843-490507:1:exon
so has part: feature:494274-495458:1:exon
so has part: feature:556351-556513:1:exon
so has part: feature:567104-567205:1:exon
so has part: feature:572662-572754:1:exon
so has part: feature:575146-575202:1:exon
so has part: feature:576120-576367:1:exon
so has part: feature:578094-578349:1:exon

position:489843:1
position: 489843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:489843-490507:1:exon

position:490507:1
position: 490507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:494274-495458:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:556351-556513:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:567104-567205:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:572662-572754:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:575146-575202:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:576120-576367:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:578094-578349:1:exon

KCND3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: KCND3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: potassium voltage-gated channel subfamily D member 3 isoform X1
translation: MAAGVAAWLPFARAAAIGWMPVANCPMPLAPTEKNKRQDELIILNVSGRRFQTWRTTLERYPDTLLGSTEKEFFFNEDTKEYFFDRDPEVFKCILNFYRTGKLHYPRYECISAYDEELAFYGILPEIIGDCCYEEYKDRKRENAERLMDDNDSENNQEGSMPSLSFRQTMWRAFENPHTSTLALVFYYVTGFFIAVSVITNVVETVPCGTVPGSKELPCGERYAVAFFCLDTACVMIFTVEYLLRLFAAPSRYRFIRSVMSIIDVVAIMPYYIGLVMTNNEDVSGAFVTLRVFRVFRIFKFSRHSQGLRILGYTLKSCASELGFLLFSLTMAIIIFATVMFYAEKGSSASKFTSIPASFWYTIVTMTTLGYGDMVPKTIAGKIFGSICSLSGVLVIALPVPVIVSNFSRIYHQNQRADKRRAQKKARLARIRVAKTGSSNAYLHSKRNGLLNEALELPGSTEEEQHMTKGTSLIESQHHHLLHCLEKTTGLSYLVDDPLLSVRTSTIKNHEFIDEQLFEQNCLEGSMQNYPSSRSPSLASARGLGTSCCSRRHKKSTHLPNSSVPATRLRSMQELSTIHIQCSEQPSLSASRSSLNMKADDGLRPNCKGAQITTAIISIPTPPALTPEAESRPGPGSPATNAPGAAASVVKVSAL
SIO_010081: KCND3
subclass of: SO_0000673
so part of: KCND3
location: join(494350..495458,556351..556513,567104..567205,572662..572754,575146..575202,576120..576367,578094..578289)
location: region:494350-578289:1
so has part: feature:494350-495458:1:exon
so has part: feature:556351-556513:1:exon
so has part: feature:567104-567205:1:exon
so has part: feature:572662-572754:1:exon
so has part: feature:575146-575202:1:exon
so has part: feature:576120-576367:1:exon
so has part: feature:578094-578289:1:exon

XP_030147645.3
type: Protein
SIO_000068: ncbiprotein

position:494350:1
position: 494350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:578289:1
position: 578289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:494350-495458:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:556351-556513:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:567104-567205:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:572662-572754:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:575146-575202:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:576120-576367:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:578094-578289:1:exon

KCND3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: KCND3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: potassium voltage-gated channel subfamily D member 3 isoform X1
translation: MAAGVAAWLPFARAAAIGWMPVANCPMPLAPTEKNKRQDELIILNVSGRRFQTWRTTLERYPDTLLGSTEKEFFFNEDTKEYFFDRDPEVFKCILNFYRTGKLHYPRYECISAYDEELAFYGILPEIIGDCCYEEYKDRKRENAERLMDDNDSENNQEGSMPSLSFRQTMWRAFENPHTSTLALVFYYVTGFFIAVSVITNVVETVPCGTVPGSKELPCGERYAVAFFCLDTACVMIFTVEYLLRLFAAPSRYRFIRSVMSIIDVVAIMPYYIGLVMTNNEDVSGAFVTLRVFRVFRIFKFSRHSQGLRILGYTLKSCASELGFLLFSLTMAIIIFATVMFYAEKGSSASKFTSIPASFWYTIVTMTTLGYGDMVPKTIAGKIFGSICSLSGVLVIALPVPVIVSNFSRIYHQNQRADKRRAQKKARLARIRVAKTGSSNAYLHSKRNGLLNEALELPGSTEEEQHMTKGTSLIESQHHHLLHCLEKTTGLSYLVDDPLLSVRTSTIKNHEFIDEQLFEQNCLEGSMQNYPSSRSPSLASARGLGTSCCSRRHKKSTHLPNSSVPATRLRSMQELSTIHIQCSEQPSLSASRSSLNMKADDGLRPNCKGAQITTAIISIPTPPALTPEAESRPGPGSPATNAPGAAASVVKVSAL
SIO_010081: KCND3
subclass of: SO_0000673
so part of: KCND3
location: join(494350..495458,556351..556513,567104..567205,572662..572754,575146..575202,576120..576367,578094..578289)
location: region:494350-578289:1
so has part: feature:494350-495458:1:exon
so has part: feature:556351-556513:1:exon
so has part: feature:567104-567205:1:exon
so has part: feature:572662-572754:1:exon
so has part: feature:575146-575202:1:exon
so has part: feature:576120-576367:1:exon
so has part: feature:578094-578289:1:exon

XP_041577205.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:494350-495458:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:556351-556513:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:567104-567205:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:572662-572754:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:575146-575202:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:576120-576367:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:578094-578289:1:exon

KCND3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: KCND3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: potassium voltage-gated channel subfamily D member 3 isoform X1
translation: MAAGVAAWLPFARAAAIGWMPVANCPMPLAPTEKNKRQDELIILNVSGRRFQTWRTTLERYPDTLLGSTEKEFFFNEDTKEYFFDRDPEVFKCILNFYRTGKLHYPRYECISAYDEELAFYGILPEIIGDCCYEEYKDRKRENAERLMDDNDSENNQEGSMPSLSFRQTMWRAFENPHTSTLALVFYYVTGFFIAVSVITNVVETVPCGTVPGSKELPCGERYAVAFFCLDTACVMIFTVEYLLRLFAAPSRYRFIRSVMSIIDVVAIMPYYIGLVMTNNEDVSGAFVTLRVFRVFRIFKFSRHSQGLRILGYTLKSCASELGFLLFSLTMAIIIFATVMFYAEKGSSASKFTSIPASFWYTIVTMTTLGYGDMVPKTIAGKIFGSICSLSGVLVIALPVPVIVSNFSRIYHQNQRADKRRAQKKARLARIRVAKTGSSNAYLHSKRNGLLNEALELPGSTEEEQHMTKGTSLIESQHHHLLHCLEKTTGLSYLVDDPLLSVRTSTIKNHEFIDEQLFEQNCLEGSMQNYPSSRSPSLASARGLGTSCCSRRHKKSTHLPNSSVPATRLRSMQELSTIHIQCSEQPSLSASRSSLNMKADDGLRPNCKGAQITTAIISIPTPPALTPEAESRPGPGSPATNAPGAAASVVKVSAL
SIO_010081: KCND3
subclass of: SO_0000673
so part of: KCND3
location: join(494350..495458,556351..556513,567104..567205,572662..572754,575146..575202,576120..576367,578094..578289)
location: region:494350-578289:1
so has part: feature:494350-495458:1:exon
so has part: feature:556351-556513:1:exon
so has part: feature:567104-567205:1:exon
so has part: feature:572662-572754:1:exon
so has part: feature:575146-575202:1:exon
so has part: feature:576120-576367:1:exon
so has part: feature:578094-578289:1:exon

XP_041577206.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:494350-495458:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:556351-556513:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:567104-567205:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:572662-572754:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:575146-575202:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:576120-576367:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:578094-578289:1:exon

KCND3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: KCND3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: potassium voltage-gated channel subfamily D member 3 isoform X2
translation: MAAGVAAWLPFARAAAIGWMPVANCPMPLAPTEKNKRQDELIILNVSGRRFQTWRTTLERYPDTLLGSTEKEFFFNEDTKEYFFDRDPEVFKCILNFYRTGKLHYPRYECISAYDEELAFYGILPEIIGDCCYEEYKDRKRENAERLMDDNDSENNQEGSMPSLSFRQTMWRAFENPHTSTLALVFYYVTGFFIAVSVITNVVETVPCGTVPGSKELPCGERYAVAFFCLDTACVMIFTVEYLLRLFAAPSRYRFIRSVMSIIDVVAIMPYYIGLVMTNNEDVSGAFVTLRVFRVFRIFKFSRHSQGLRILGYTLKSCASELGFLLFSLTMAIIIFATVMFYAEKGSSASKFTSIPASFWYTIVTMTTLGYGDMVPKTIAGKIFGSICSLSGVLVIALPVPVIVSNFSRIYHQNQRADKRRAQKKARLARIRVAKTGSSNAYLHSKRNGLLNEALELPGSTEEEQHMTKGTSLIESQHHHLLHCLEKTTNHEFIDEQLFEQNCLEGSMQNYPSSRSPSLASARGLGTSCCSRRHKKSTHLPNSSVPATRLRSMQELSTIHIQCSEQPSLSASRSSLNMKADDGLRPNCKGAQITTAIISIPTPPALTPEAESRPGPGSPATNAPGAAASVVKVSAL
SIO_010081: KCND3
subclass of: SO_0000673
so part of: KCND3
location: join(494350..495458,556351..556513,567104..567205,572662..572754,576120..576367,578094..578289)
location: region:494350-578289:1
so has part: feature:494350-495458:1:exon
so has part: feature:556351-556513:1:exon
so has part: feature:567104-567205:1:exon
so has part: feature:572662-572754:1:exon
so has part: feature:576120-576367:1:exon
so has part: feature:578094-578289:1:exon

XP_030147650.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:494350-495458:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:556351-556513:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:567104-567205:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:572662-572754:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:576120-576367:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:578094-578289:1:exon

LOC121471147
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121471147
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 578642..584244
location: region:578642-584244:1
so has part: feature:578642-584244:1:exon
subclass of: SO_0000011

121471147
type: Gene
SIO_000068: ncbigene

position:578642:1
position: 578642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:584244:1
position: 584244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:578642-584244:1:exon

LOC121471147
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC121471147
product: uncharacterized LOC121471147
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 10 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 66 samples with support for all annotated introns
transcript id: XR_005982552.1
SIO_010081: LOC121471147
subclass of: SO_0000673
so part of: LOC121471147
location: join(578642..579241,579361..584244)
location: region:578642-584244:1
so has part: feature:578642-579241:1:exon
so has part: feature:579361-584244:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:578642-579241:1:exon

position:579241:1
position: 579241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:579361-584244:1:exon

position:579361:1
position: 579361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DDX20
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: DDX20
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(585350..590758)
location: region:585350-590758:-1
so has part: feature:585350-590758:-1:exon
subclass of: SO_0000010

100230300
type: Gene
SIO_000068: ncbigene

position:585350:-1
position: 585350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:590758:-1
position: 590758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:585350-590758:-1:exon

DDX20
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: DDX20
product: DEAD-box helicase 20
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 2 long SRA reads, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 78 samples with support for all annotated introns
transcript id: XM_030291996.3
SIO_010081: DDX20
subclass of: SO_0000673
so part of: DDX20
location: complement(join(585350..586592,586917..587018,587554..587659,588139..588221,588565..588623,588840..588978,589399..589541,589616..589730,589920..590088,590218..590312,590542..590758))
location: region:585350-590758:-1
so has part: feature:590542-590758:-1:exon
so has part: feature:590218-590312:-1:exon
so has part: feature:589920-590088:-1:exon
so has part: feature:589616-589730:-1:exon
so has part: feature:589399-589541:-1:exon
so has part: feature:588840-588978:-1:exon
so has part: feature:588565-588623:-1:exon
so has part: feature:588139-588221:-1:exon
so has part: feature:587554-587659:-1:exon
so has part: feature:586917-587018:-1:exon
so has part: feature:585350-586592:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:590542-590758:-1:exon

position:590542:-1
position: 590542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:590218-590312:-1:exon

position:590218:-1
position: 590218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:590312:-1
position: 590312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:589920-590088:-1:exon

position:589920:-1
position: 589920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:590088:-1
position: 590088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:589616-589730:-1:exon

position:589616:-1
position: 589616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:589730:-1
position: 589730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:589399-589541:-1:exon

position:589399:-1
position: 589399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:589541:-1
position: 589541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:588840-588978:-1:exon

position:588840:-1
position: 588840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:588978:-1
position: 588978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:588565-588623:-1:exon

position:588565:-1
position: 588565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:588623:-1
position: 588623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:588139-588221:-1:exon

position:588139:-1
position: 588139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:588221:-1
position: 588221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:587554-587659:-1:exon

position:587554:-1
position: 587554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:587659:-1
position: 587659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:586917-587018:-1:exon

position:586917:-1
position: 586917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:587018:-1
position: 587018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:585350-586592:-1:exon

position:586592:-1
position: 586592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DDX20
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: DDX20
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable ATP-dependent RNA helicase DDX20
translation: MAAPREAAGRARTRDVLLPGGPADFGSLLLSPPVLAGLEAAGFHRPSPVQLKAIPLGRCGLDLIVQAKSGTGKTCVFATIALEAVLLESPATQILVLAPTREIAVQIHAVITTIGIKMEGLECHVFIGGTPLSQDRSRLKKCHIAVGSPGRIKQLIELEYLSTASVRLLVLDEADKLLEEGSFQEQINWIYSSLPLNKQMLAVSATYPESLAAALTRYMREPTFVRLNPTDPSLLGLKQYYKIVNSHPLPHKTFEEKTQHLQELFSKIPFNQALVFSNLHSRAQHLAEILTSRGFPAECISGNMNQNQRLDAMAKLKQFHCRVLISTDLTSRGIDAEKVNLVINLDVPLDWETYLHRIGRAGRFGTLGLSVTYCCRGEEENTMMKIAQKCNLQLLPLPEPIPPGMMEQFEDGQVEVKPAIPTAPVLNCDTVCPKPEQPVLQPVQNGFPNTPQPPSHLPRGNSSVERPKKTPKQKQNKKCTNPAKVERNSAPQTSSCRTEQRNQVKPISRMDGQHSTQAPYEEALKKNLPKIPCLSSFKNHLASPWSFSDFVEDYDYFIKEGSEREVEILRSYSGPGEQRGLPRNGDVEWEEMEHHPEAAADGAVSADSDGSESSRDSCSTRASLSCPGALSDTQEPRAGPCPTPEQPREPPHGPRQNGVKKKVPKQSAKHKKSHEHQFSRPARSRTEEEQSCSSWDDAAHEGWSSEEYWKCYYNAWQSYYSALSHYSRSYWQFSCISAYHINSVYLQELLRDED
SIO_010081: DDX20
subclass of: SO_0000673
so part of: DDX20
location: complement(join(585523..586592,586917..587018,587554..587659,588139..588221,588565..588623,588840..588978,589399..589541,589616..589730,589920..590088,590218..590312,590542..590725))
location: region:585523-590725:-1
so has part: feature:590542-590725:-1:exon
so has part: feature:590218-590312:-1:exon
so has part: feature:589920-590088:-1:exon
so has part: feature:589616-589730:-1:exon
so has part: feature:589399-589541:-1:exon
so has part: feature:588840-588978:-1:exon
so has part: feature:588565-588623:-1:exon
so has part: feature:588139-588221:-1:exon
so has part: feature:587554-587659:-1:exon
so has part: feature:586917-587018:-1:exon
so has part: feature:585523-586592:-1:exon

XP_030147856.3
type: Protein
SIO_000068: ncbiprotein

position:585523:-1
position: 585523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:590725:-1
position: 590725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:590542-590725:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:590218-590312:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:589920-590088:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:589616-589730:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:589399-589541:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:588840-588978:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:588565-588623:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:588139-588221:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:587554-587659:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:586917-587018:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:585523-586592:-1:exon

INKA2
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: INKA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 598228..608030
location: region:598228-608030:1
so has part: feature:598228-608030:1:exon
subclass of: SO_0000010

115492491
type: Gene
SIO_000068: ncbigene

position:598228:1
position: 598228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:608030:1
position: 608030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:598228-608030:1:exon

INKA2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: INKA2
product: inka box actin regulator 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 63 samples with support for all annotated introns
transcript id: XM_041721308.1
SIO_010081: INKA2
subclass of: SO_0000673
so part of: INKA2
location: join(598228..598325,606338..608030)
location: region:598228-608030:1
so has part: feature:598228-598325:1:exon
so has part: feature:606338-608030:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:598228-598325:1:exon

position:598325:1
position: 598325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:606338-608030:1:exon

position:606338:1
position: 606338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

INKA2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: INKA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PAK4-inhibitor INKA2
translation: MEQHLRRLRQELLSMKEVGDGLHEQMNCMMGALQELKLLQVQTALEHLDISGRRSPAEQRRCGRSSAGPGQDRGRCPPSPACPVPGPDSVSQPAVTPGSSHPRDSPCAPGPPCPVPTAWPPCHECPGCDDGHDWTSSLMSQSRTRQPLVLGDNVFADLVGNWLDLPELEKKGEKSEAALSASRSQELCRKFSLTANIFKKFLRSVRPDRDRLLKEKPCWLPPEEQRPDISKRSKKISKLKGTFYLPLHGNLQSHHSKAERCPRAESHAERPKTSARRVPDGRGHGQAGFDINTAVWV
SIO_010081: INKA2
subclass of: SO_0000673
so part of: INKA2
location: join(598290..598325,606338..607195)
location: region:598290-607195:1
so has part: feature:598290-598325:1:exon
so has part: feature:606338-607195:1:exon

XP_041577242.1
type: Protein
SIO_000068: ncbiprotein

position:598290:1
position: 598290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:607195:1
position: 607195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:598290-598325:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:606338-607195:1:exon

RAP1A
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: RAP1A
note: RAP1A, member of RAS oncogene family; Derived by automated computational analysis using gene prediction method: BestRefSeq,Gnomon.
so part of: sequence
location: complement(613954..643158)
location: region:613954-643158:-1
so has part: feature:613954-643158:-1:exon
subclass of: SO_0000010

100151697
type: Gene
SIO_000068: ncbigene

position:613954:-1
position: 613954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:643158:-1
position: 643158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:613954-643158:-1:exon

RAP1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: RAP1A
product: RAP1A, member of RAS oncogene family, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 59 ESTs, 64 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 84 samples with support for all annotated introns
transcript id: XM_030261441.3
SIO_010081: RAP1A
subclass of: SO_0000673
so part of: RAP1A
location: complement(join(613954..614678,615907..616022,618244..618387,620630..620770,621810..621866,622589..622657,625539..625622,626463..626550,629155..629223,643031..643058))
location: region:613954-643058:-1
so has part: feature:643031-643058:-1:exon
so has part: feature:629155-629223:-1:exon
so has part: feature:626463-626550:-1:exon
so has part: feature:625539-625622:-1:exon
so has part: feature:622589-622657:-1:exon
so has part: feature:621810-621866:-1:exon
so has part: feature:620630-620770:-1:exon
so has part: feature:618244-618387:-1:exon
so has part: feature:615907-616022:-1:exon
so has part: feature:613954-614678:-1:exon

position:643058:-1
position: 643058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:643031-643058:-1:exon

position:643031:-1
position: 643031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:629155-629223:-1:exon

position:629155:-1
position: 629155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:629223:-1
position: 629223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:626463-626550:-1:exon

position:626463:-1
position: 626463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:626550:-1
position: 626550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:625539-625622:-1:exon

position:625539:-1
position: 625539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:625622:-1
position: 625622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:622589-622657:-1:exon

position:622589:-1
position: 622589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:622657:-1
position: 622657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:621810-621866:-1:exon

position:621810:-1
position: 621810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:621866:-1
position: 621866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:620630-620770:-1:exon

position:620630:-1
position: 620630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:620770:-1
position: 620770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:618244-618387:-1:exon

position:618244:-1
position: 618244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:618387:-1
position: 618387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:615907-616022:-1:exon

position:615907:-1
position: 615907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:616022:-1
position: 616022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:613954-614678:-1:exon

position:614678:-1
position: 614678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RAP1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: RAP1A
product: RAP1A, member of RAS oncogene family, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 59 ESTs, 64 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 67 samples with support for all annotated introns
transcript id: XM_041721190.1
SIO_010081: RAP1A
subclass of: SO_0000673
so part of: RAP1A
location: complement(join(613954..614678,615907..616022,618244..618387,620630..620770,621810..621866,622589..622657,625539..625622,626422..626550,629155..629223,643031..643056))
location: region:613954-643056:-1
so has part: feature:643031-643056:-1:exon
so has part: feature:629155-629223:-1:exon
so has part: feature:626422-626550:-1:exon
so has part: feature:625539-625622:-1:exon
so has part: feature:622589-622657:-1:exon
so has part: feature:621810-621866:-1:exon
so has part: feature:620630-620770:-1:exon
so has part: feature:618244-618387:-1:exon
so has part: feature:615907-616022:-1:exon
so has part: feature:613954-614678:-1:exon

position:643056:-1
position: 643056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:643031-643056:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:629155-629223:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:626422-626550:-1:exon

position:626422:-1
position: 626422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:625539-625622:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:622589-622657:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:621810-621866:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:620630-620770:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:618244-618387:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:615907-616022:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:613954-614678:-1:exon

RAP1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: RAP1A
product: RAP1A, member of RAS oncogene family, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 59 ESTs, 1 long SRA read, 64 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_032753007.2
SIO_010081: RAP1A
subclass of: SO_0000673
so part of: RAP1A
location: complement(join(613954..614678,615907..616022,618244..618387,620630..620770,621810..621866,622589..622657,625539..625622,625740..625997))
location: region:613954-625997:-1
so has part: feature:625740-625997:-1:exon
so has part: feature:625539-625622:-1:exon
so has part: feature:622589-622657:-1:exon
so has part: feature:621810-621866:-1:exon
so has part: feature:620630-620770:-1:exon
so has part: feature:618244-618387:-1:exon
so has part: feature:615907-616022:-1:exon
so has part: feature:613954-614678:-1:exon

position:625997:-1
position: 625997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:625740-625997:-1:exon

position:625740:-1
position: 625740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:625539-625622:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:622589-622657:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:621810-621866:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:620630-620770:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:618244-618387:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:615907-616022:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:613954-614678:-1:exon

RAP1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: RAP1A
product: RAP1A, member of RAS oncogene family
inference: similar to RNA sequence, mRNA (same species):RefSeq:NM_001127378.1
exception: annotated by transcript or proteomic data
note: The RefSeq transcript has 4 substitutions, 1 non-frameshifting indel compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001127378.1
SIO_010081: RAP1A
subclass of: SO_0000673
so part of: RAP1A
location: complement(join(613957..614678,615907..616022,618244..618387,620630..620770,621810..621866,622589..622657,625539..625622,629155..629223,643031..643158))
location: region:613957-643158:-1
so has part: feature:643031-643158:-1:exon
so has part: feature:629155-629223:-1:exon
so has part: feature:625539-625622:-1:exon
so has part: feature:622589-622657:-1:exon
so has part: feature:621810-621866:-1:exon
so has part: feature:620630-620770:-1:exon
so has part: feature:618244-618387:-1:exon
so has part: feature:615907-616022:-1:exon
so has part: feature:613957-614678:-1:exon

position:613957:-1
position: 613957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:643031-643158:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:629155-629223:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:625539-625622:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:622589-622657:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:621810-621866:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:620630-620770:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:618244-618387:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:615907-616022:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:613957-614678:-1:exon

RAP1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: RAP1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rap-1A isoform X1
translation: MREYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDCQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTEDVPMILVGNKCDLEEERVVGKEQGQNLARQWCNCAFLESSAKSKINVNEIFYDLVRQINRKTPVEKKKPKKKSCLLL
SIO_010081: RAP1A
subclass of: SO_0000673
so part of: RAP1A
location: complement(join(615936..616022,618244..618387,620630..620770,621810..621866,622589..622657,625539..625595))
location: region:615936-625595:-1
so has part: feature:625539-625595:-1:exon
so has part: feature:622589-622657:-1:exon
so has part: feature:621810-621866:-1:exon
so has part: feature:620630-620770:-1:exon
so has part: feature:618244-618387:-1:exon
so has part: feature:615936-616022:-1:exon

XP_030117301.1
type: Protein
SIO_000068: ncbiprotein

position:615936:-1
position: 615936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:625595:-1
position: 625595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:625539-625595:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:622589-622657:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:621810-621866:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:620630-620770:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:618244-618387:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:615936-616022:-1:exon

RAP1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: RAP1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rap-1A isoform X1
translation: MREYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDCQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTEDVPMILVGNKCDLEEERVVGKEQGQNLARQWCNCAFLESSAKSKINVNEIFYDLVRQINRKTPVEKKKPKKKSCLLL
SIO_010081: RAP1A
subclass of: SO_0000673
so part of: RAP1A
location: complement(join(615936..616022,618244..618387,620630..620770,621810..621866,622589..622657,625539..625595))
location: region:615936-625595:-1
so has part: feature:625539-625595:-1:exon
so has part: feature:622589-622657:-1:exon
so has part: feature:621810-621866:-1:exon
so has part: feature:620630-620770:-1:exon
so has part: feature:618244-618387:-1:exon
so has part: feature:615936-616022:-1:exon

XP_032608898.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:625539-625595:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:622589-622657:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:621810-621866:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:620630-620770:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:618244-618387:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:615936-616022:-1:exon

RAP1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: RAP1A
inference: similar to AA sequence (same species):RefSeq:NP_001120850.1
exception: annotated by transcript or proteomic data
note: The RefSeq protein has 2 substitutions compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: ras-related protein Rap-1A
translation: MREYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDCQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTEDVPMILVGNKCDLEEERVVGKEQGQNLARQWCNCAFLESSAKSKINVXEIFYDLVRQINRXTPVEKKKPKKKSCLLL
SIO_010081: RAP1A
subclass of: SO_0000673
so part of: RAP1A
location: complement(join(615936..616022,618244..618387,620630..620770,621810..621866,622589..622657,625539..625595))
location: region:615936-625595:-1
so has part: feature:625539-625595:-1:exon
so has part: feature:622589-622657:-1:exon
so has part: feature:621810-621866:-1:exon
so has part: feature:620630-620770:-1:exon
so has part: feature:618244-618387:-1:exon
so has part: feature:615936-616022:-1:exon

NP_001120850.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:625539-625595:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:622589-622657:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:621810-621866:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:620630-620770:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:618244-618387:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:615936-616022:-1:exon

RAP1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: RAP1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rap-1A isoform X1
translation: MREYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDCQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTEDVPMILVGNKCDLEEERVVGKEQGQNLARQWCNCAFLESSAKSKINVNEIFYDLVRQINRKTPVEKKKPKKKSCLLL
SIO_010081: RAP1A
subclass of: SO_0000673
so part of: RAP1A
location: complement(join(615936..616022,618244..618387,620630..620770,621810..621866,622589..622657,625539..625595))
location: region:615936-625595:-1
so has part: feature:625539-625595:-1:exon
so has part: feature:622589-622657:-1:exon
so has part: feature:621810-621866:-1:exon
so has part: feature:620630-620770:-1:exon
so has part: feature:618244-618387:-1:exon
so has part: feature:615936-616022:-1:exon

XP_041577124.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:625539-625595:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:622589-622657:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:621810-621866:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:620630-620770:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:618244-618387:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:615936-616022:-1:exon

C26H1orf162
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: C26H1orf162
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(654629..658596)
location: region:654629-658596:-1
so has part: feature:654629-658596:-1:exon
subclass of: SO_0000010

101233855
type: Gene
SIO_000068: ncbigene

position:654629:-1
position: 654629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:658596:-1
position: 658596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:654629-658596:-1:exon

C26H1orf162
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: C26H1orf162
product: chromosome 26 C1orf162 homolog, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_030261439.3
SIO_010081: C26H1orf162
subclass of: SO_0000673
so part of: C26H1orf162
location: complement(join(654629..655175,655614..655693,656102..656190,656538..656649,656962..657024,658350..658596))
location: region:654629-658596:-1
so has part: feature:658350-658596:-1:exon
so has part: feature:656962-657024:-1:exon
so has part: feature:656538-656649:-1:exon
so has part: feature:656102-656190:-1:exon
so has part: feature:655614-655693:-1:exon
so has part: feature:654629-655175:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:658350-658596:-1:exon

position:658350:-1
position: 658350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:656962-657024:-1:exon

position:656962:-1
position: 656962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:657024:-1
position: 657024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:656538-656649:-1:exon

position:656538:-1
position: 656538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:656649:-1
position: 656649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:656102-656190:-1:exon

position:656102:-1
position: 656102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:656190:-1
position: 656190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:655614-655693:-1:exon

position:655614:-1
position: 655614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:655693:-1
position: 655693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:654629-655175:-1:exon

position:655175:-1
position: 655175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

C26H1orf162
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: C26H1orf162
product: chromosome 26 C1orf162 homolog, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_004176658.4
SIO_010081: C26H1orf162
subclass of: SO_0000673
so part of: C26H1orf162
location: complement(join(654629..655175,655614..655693,656102..656190,656538..656649,656962..657024,657730..658596))
location: region:654629-658596:-1
so has part: feature:657730-658596:-1:exon
so has part: feature:656962-657024:-1:exon
so has part: feature:656538-656649:-1:exon
so has part: feature:656102-656190:-1:exon
so has part: feature:655614-655693:-1:exon
so has part: feature:654629-655175:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:657730-658596:-1:exon

position:657730:-1
position: 657730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:656962-657024:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:656538-656649:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:656102-656190:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:655614-655693:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:654629-655175:-1:exon

C26H1orf162
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: C26H1orf162
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein C1orf162 homolog
translation: MGGLYSKADPVEPKTVSTTTTVPSTVPTTVHTPTDDFKAAEARCWINNHEILYMSLAFISGILLTLLVFAIIFLFRKSSKRSHQNLQEETVFQMTAEESLRNTQNEVTYSTLVFQQGRTPLPV
SIO_010081: C26H1orf162
subclass of: SO_0000673
so part of: C26H1orf162
location: complement(join(655116..655175,655614..655693,656102..656190,656538..656649,656962..656992))
location: region:655116-656992:-1
so has part: feature:656962-656992:-1:exon
so has part: feature:656538-656649:-1:exon
so has part: feature:656102-656190:-1:exon
so has part: feature:655614-655693:-1:exon
so has part: feature:655116-655175:-1:exon

XP_004176706.3
type: Protein
SIO_000068: ncbiprotein

position:655116:-1
position: 655116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:656992:-1
position: 656992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:656962-656992:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:656538-656649:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:656102-656190:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:655614-655693:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:655116-655175:-1:exon

C26H1orf162
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: C26H1orf162
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein C1orf162 homolog
translation: MGGLYSKADPVEPKTVSTTTTVPSTVPTTVHTPTDDFKAAEARCWINNHEILYMSLAFISGILLTLLVFAIIFLFRKSSKRSHQNLQEETVFQMTAEESLRNTQNEVTYSTLVFQQGRTPLPV
SIO_010081: C26H1orf162
subclass of: SO_0000673
so part of: C26H1orf162
location: complement(join(655116..655175,655614..655693,656102..656190,656538..656649,656962..656992))
location: region:655116-656992:-1
so has part: feature:656962-656992:-1:exon
so has part: feature:656538-656649:-1:exon
so has part: feature:656102-656190:-1:exon
so has part: feature:655614-655693:-1:exon
so has part: feature:655116-655175:-1:exon

XP_030117299.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:656962-656992:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:656538-656649:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:656102-656190:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:655614-655693:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:655116-655175:-1:exon

ATP5PB
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
alternative label: ATP5F1
gene: ATP5PB
gene synonym: ATP5F1
note: ATP synthase peripheral stalk-membrane subunit b; Derived by automated computational analysis using gene prediction method: BestRefSeq,Gnomon.
so part of: sequence
location: complement(658736..661763)
location: region:658736-661763:-1
so has part: feature:658736-661763:-1:exon
subclass of: SO_0000010

100190221
type: Gene
SIO_000068: ncbigene

position:658736:-1
position: 658736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:661763:-1
position: 661763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:658736-661763:-1:exon

ATP5PB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
alternative label: ATP5F1
gene: ATP5PB
gene synonym: ATP5F1
product: ATP synthase peripheral stalk-membrane subunit b
inference: similar to RNA sequence, mRNA (same species):RefSeq:NM_001245156.1
exception: annotated by transcript or proteomic data
note: The RefSeq transcript has 19 substitutions, 3 non-frameshifting indels compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001245156.1
SIO_010081: ATP5PB
subclass of: SO_0000673
so part of: ATP5PB
location: complement(join(658736..658890,659203..659382,659514..659639,660113..660276,660738..660883,661307..661349,661433..661561,661662..661763))
location: region:658736-661763:-1
so has part: feature:661662-661763:-1:exon
so has part: feature:661433-661561:-1:exon
so has part: feature:661307-661349:-1:exon
so has part: feature:660738-660883:-1:exon
so has part: feature:660113-660276:-1:exon
so has part: feature:659514-659639:-1:exon
so has part: feature:659203-659382:-1:exon
so has part: feature:658736-658890:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:661662-661763:-1:exon

position:661662:-1
position: 661662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:661433-661561:-1:exon

position:661433:-1
position: 661433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:661561:-1
position: 661561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:661307-661349:-1:exon

position:661307:-1
position: 661307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:661349:-1
position: 661349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:660738-660883:-1:exon

position:660738:-1
position: 660738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:660883:-1
position: 660883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:660113-660276:-1:exon

position:660113:-1
position: 660113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:660276:-1
position: 660276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:659514-659639:-1:exon

position:659514:-1
position: 659514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:659639:-1
position: 659639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:659203-659382:-1:exon

position:659203:-1
position: 659203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:659382:-1
position: 659382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:658736-658890:-1:exon

position:658890:-1
position: 658890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ATP5PB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
alternative label: ATP5F1
gene: ATP5PB
gene synonym: ATP5F1
product: ATP synthase peripheral stalk-membrane subunit b, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 1 long SRA read, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 105 samples with support for all annotated introns
transcript id: XM_030291727.3
SIO_010081: ATP5PB
subclass of: SO_0000673
so part of: ATP5PB
location: complement(join(658736..658890,659203..659382,659514..659639,660113..660276,660738..660883,661307..661349,661433..661759))
location: region:658736-661759:-1
so has part: feature:661433-661759:-1:exon
so has part: feature:661307-661349:-1:exon
so has part: feature:660738-660883:-1:exon
so has part: feature:660113-660276:-1:exon
so has part: feature:659514-659639:-1:exon
so has part: feature:659203-659382:-1:exon
so has part: feature:658736-658890:-1:exon

position:661759:-1
position: 661759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:661433-661759:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:661307-661349:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:660738-660883:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:660113-660276:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:659514-659639:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:659203-659382:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:658736-658890:-1:exon

ATP5PB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
alternative label: ATP5F1
gene: ATP5PB
gene synonym: ATP5F1
product: ATP synthase peripheral stalk-membrane subunit b, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_030291726.3
SIO_010081: ATP5PB
subclass of: SO_0000673
so part of: ATP5PB
location: complement(join(658736..658890,659203..659382,659514..659639,660113..660276,660738..660883,660987..661048))
location: region:658736-661048:-1
so has part: feature:660987-661048:-1:exon
so has part: feature:660738-660883:-1:exon
so has part: feature:660113-660276:-1:exon
so has part: feature:659514-659639:-1:exon
so has part: feature:659203-659382:-1:exon
so has part: feature:658736-658890:-1:exon

position:661048:-1
position: 661048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:660987-661048:-1:exon

position:660987:-1
position: 660987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:660738-660883:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:660113-660276:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:659514-659639:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:659203-659382:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:658736-658890:-1:exon

ATP5PB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
alternative label: ATP5F1
gene: ATP5PB
gene synonym: ATP5F1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP synthase F(0) complex subunit B1, mitochondrial isoform X2
translation: MLSRLVLRAAPAALRALPPPVAVGVLHTTRTLHTTQQSLAPVPPLPEKGGEVRHGLIPEEFFQFLYPKTGVTGPYMLGTGLLLYLLSKEIYVVNHETAAAACILTVIVYAIKKFGPDVAAFADKLNEEKMATALAMKNEAVQSLQTAIEDEKKEQWRAEGRSYLFDAKRNNVAMLLEANYRERLLMVYNEVKKRLDYQVAMQTLKRQKEQDHMIQWVERNVVQSITPQQQKESIAKCILDLKALSKSAHAAV
SIO_010081: ATP5PB
subclass of: SO_0000673
so part of: ATP5PB
location: complement(join(658819..658890,659203..659382,659514..659639,660113..660276,660738..660883,661307..661349,661433..661460))
location: region:658819-661460:-1
so has part: feature:661433-661460:-1:exon
so has part: feature:661307-661349:-1:exon
so has part: feature:660738-660883:-1:exon
so has part: feature:660113-660276:-1:exon
so has part: feature:659514-659639:-1:exon
so has part: feature:659203-659382:-1:exon
so has part: feature:658819-658890:-1:exon

XP_030147587.3
type: Protein
SIO_000068: ncbiprotein

position:658819:-1
position: 658819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:661460:-1
position: 661460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:661433-661460:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:661307-661349:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:660738-660883:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:660113-660276:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:659514-659639:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:659203-659382:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:658819-658890:-1:exon

ATP5PB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
alternative label: ATP5F1
gene: ATP5PB
gene synonym: ATP5F1
inference: similar to AA sequence (same species):RefSeq:NP_001232085.1
exception: annotated by transcript or proteomic data
note: The RefSeq protein has 1 substitution compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: ATP synthase F(0) complex subunit B1, mitochondrial
translation: MLSRLVLRAAPAALRALPPPVAVGVLHTTRTLHTTQQSLAPVPPLPEKGGEVRHGLIPEEFFQFLYPKTGVTGPYMLGTGLLLYLLSKEIYVVNHETAAAACILTVIVYAIKKFGPDVAAFADKLNEEKMATALAMKNEAVQSLQTAIEDEKKEQWRAEGRSYLFDAKRNNVAMLLEANYRERLLMVYNEVKKRLDYQVAMQTLKRQKEQDHMIQWVERNVVQSITPQQQKESIAKCILDLKALSKSAHAVV
SIO_010081: ATP5PB
subclass of: SO_0000673
so part of: ATP5PB
location: complement(join(658819..658890,659203..659382,659514..659639,660113..660276,660738..660883,661307..661349,661433..661460))
location: region:658819-661460:-1
so has part: feature:661433-661460:-1:exon
so has part: feature:661307-661349:-1:exon
so has part: feature:660738-660883:-1:exon
so has part: feature:660113-660276:-1:exon
so has part: feature:659514-659639:-1:exon
so has part: feature:659203-659382:-1:exon
so has part: feature:658819-658890:-1:exon

NP_001232085.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:661433-661460:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:661307-661349:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:660738-660883:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:660113-660276:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:659514-659639:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:659203-659382:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:658819-658890:-1:exon

ATP5PB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
alternative label: ATP5F1
gene: ATP5PB
gene synonym: ATP5F1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP synthase F(0) complex subunit B1, mitochondrial isoform X1
translation: MGTLCPPCDRLTELEMVLHTTRTLHTTQQSLAPVPPLPEKGGEVRHGLIPEEFFQFLYPKTGVTGPYMLGTGLLLYLLSKEIYVVNHETAAAACILTVIVYAIKKFGPDVAAFADKLNEEKMATALAMKNEAVQSLQTAIEDEKKEQWRAEGRSYLFDAKRNNVAMLLEANYRERLLMVYNEVKKRLDYQVAMQTLKRQKEQDHMIQWVERNVVQSITPQQQKESIAKCILDLKALSKSAHAAV
SIO_010081: ATP5PB
subclass of: SO_0000673
so part of: ATP5PB
location: complement(join(658819..658890,659203..659382,659514..659639,660113..660276,660738..660883,660987..661033))
location: region:658819-661033:-1
so has part: feature:660987-661033:-1:exon
so has part: feature:660738-660883:-1:exon
so has part: feature:660113-660276:-1:exon
so has part: feature:659514-659639:-1:exon
so has part: feature:659203-659382:-1:exon
so has part: feature:658819-658890:-1:exon

XP_030147586.3
type: Protein
SIO_000068: ncbiprotein

position:661033:-1
position: 661033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:660987-661033:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:660738-660883:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:660113-660276:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:659514-659639:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:659203-659382:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:658819-658890:-1:exon

WDR77
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: WDR77
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 661849..666886
location: region:661849-666886:1
so has part: feature:661849-666886:1:exon
subclass of: SO_0000010

100232675
type: Gene
SIO_000068: ncbigene

position:661849:1
position: 661849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:666886:1
position: 666886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:661849-666886:1:exon

WDR77
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: WDR77
product: WD repeat domain 77
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 4 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 128 samples with support for all annotated introns
transcript id: XM_030261436.3
SIO_010081: WDR77
subclass of: SO_0000673
so part of: WDR77
location: join(661849..662067,662275..662460,662789..662930,663002..663051,663336..663406,663759..663813,664034..664105,664194..664302,664757..664825,665136..666886)
location: region:661849-666886:1
so has part: feature:661849-662067:1:exon
so has part: feature:662275-662460:1:exon
so has part: feature:662789-662930:1:exon
so has part: feature:663002-663051:1:exon
so has part: feature:663336-663406:1:exon
so has part: feature:663759-663813:1:exon
so has part: feature:664034-664105:1:exon
so has part: feature:664194-664302:1:exon
so has part: feature:664757-664825:1:exon
so has part: feature:665136-666886:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:661849-662067:1:exon

position:662067:1
position: 662067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:662275-662460:1:exon

position:662275:1
position: 662275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:662460:1
position: 662460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:662789-662930:1:exon

position:662789:1
position: 662789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:662930:1
position: 662930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:663002-663051:1:exon

position:663002:1
position: 663002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:663051:1
position: 663051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:663336-663406:1:exon

position:663336:1
position: 663336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:663406:1
position: 663406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:663759-663813:1:exon

position:663759:1
position: 663759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:663813:1
position: 663813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:664034-664105:1:exon

position:664034:1
position: 664034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:664105:1
position: 664105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:664194-664302:1:exon

position:664194:1
position: 664194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:664302:1
position: 664302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:664757-664825:1:exon

position:664757:1
position: 664757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:664825:1
position: 664825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:665136-666886:1:exon

position:665136:1
position: 665136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

WDR77
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: WDR77
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: methylosome protein 50
translation: MEEPPPPPPPPPPPPQAAPPPAPPDSAAPAASLDGDPAAEAAAEWNIPPSAPACMERHLERAHYRADGVLLLAASGLNGRCWTGSLWVFAEPRRAPSEGFCTAGVQTEAGVADLCWLADRGILVASDSGAVELWELEENESLIVNKFCKYEHDDIVTSVSVLAGSSQAVSGGRDFCVKVWDIPEQTVLHSYRAHSDAVTCVASCPGKDTVFLSCAEDNRILLWDTRCPKPATRIVCSACNYLPTSVMWHPQKSDIFVLGDESGTVALVDTKNPDSALSAAVHTRGITGFAFSAHSSPLLASISEDCSVAVLDSDLSEVFRSHSHRDFVKGLSWSPSDDALLTTVGWDHQVLHHTVPLPAGEASGINCVKE
SIO_010081: WDR77
subclass of: SO_0000673
so part of: WDR77
location: join(661869..662067,662275..662460,662789..662930,663002..663051,663336..663406,663759..663813,664034..664105,664194..664302,664757..664825,665136..665295)
location: region:661869-665295:1
so has part: feature:661869-662067:1:exon
so has part: feature:662275-662460:1:exon
so has part: feature:662789-662930:1:exon
so has part: feature:663002-663051:1:exon
so has part: feature:663336-663406:1:exon
so has part: feature:663759-663813:1:exon
so has part: feature:664034-664105:1:exon
so has part: feature:664194-664302:1:exon
so has part: feature:664757-664825:1:exon
so has part: feature:665136-665295:1:exon

XP_030117296.3
type: Protein
SIO_000068: ncbiprotein

position:661869:1
position: 661869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:665295:1
position: 665295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:661869-662067:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:662275-662460:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:662789-662930:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:663002-663051:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:663336-663406:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:663759-663813:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:664034-664105:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:664194-664302:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:664757-664825:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:665136-665295:1:exon

C26H6orf132
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: C26H6orf132
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(668081..682608)
location: region:668081-682608:-1
so has part: feature:668081-682608:-1:exon
subclass of: SO_0000010

115498560
type: Gene
SIO_000068: ncbigene

position:668081:-1
position: 668081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:682608:-1
position: 682608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:668081-682608:-1:exon

C26H6orf132
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: C26H6orf132
product: chromosome 26 C6orf132 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030291917.3
SIO_010081: C26H6orf132
subclass of: SO_0000673
so part of: C26H6orf132
location: complement(join(668081..671309,671710..674659,674933..675008,678473..678588,682386..682608))
location: region:668081-682608:-1
so has part: feature:682386-682608:-1:exon
so has part: feature:678473-678588:-1:exon
so has part: feature:674933-675008:-1:exon
so has part: feature:671710-674659:-1:exon
so has part: feature:668081-671309:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:682386-682608:-1:exon

position:682386:-1
position: 682386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:678473-678588:-1:exon

position:678473:-1
position: 678473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:678588:-1
position: 678588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:674933-675008:-1:exon

position:674933:-1
position: 674933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:675008:-1
position: 675008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:671710-674659:-1:exon

position:671710:-1
position: 671710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:674659:-1
position: 674659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:668081-671309:-1:exon

position:671309:-1
position: 671309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

C26H6orf132
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: C26H6orf132
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C6orf132 homolog
translation: MKKQQAHSVQGTFSRLFGKRHAGPSAASLFAANPPWIFAQEVTSDSAGGTGDVIEVYYGDNRFGTVTDSGTATLKPRPRVRPLLTFLPLNAQESHGVAVPTPSVPEDFVEKAALGSGSQLNGNSRMYSSAGDLRPQALDGDDLDEDIPPPPSVPPPPPPAPVSPPLASPVPPPPEMLPPPPPLPPEIVPPPPPLPPEMVPPPLPPEMVPPPPATAAPPPPASALPSPSTPAPPDFIPPAPPGACDPFGPGLSKWKSETVLNTRQAEAEGPLCPAEAGAPAAPSPKESLQPKPEPHLTFPRSFKVPPPAPARSSSIPVQEGQRGQREPVPRQPHARPPLPPCFTIRAAGKTRPGDGEQRGSGLRQGAGKPPVPPPLSPKPGPGLGQGVTPTGRRSPLPGSEGEKIPQLKTAGRDSPPKSEPLTANDLDLPPPDYPTCEDDWKDDDWKDANNLNKLRDELSALLRSPRREERPLERPGAPRPVDSGPSRAGSREPALSEPQPARKDTGLSKGGESEKKEAPSSPPSTTGGSPSTAVTAPESNPDTQPRSVMTIRNELEAVLSLKKEGKPAPGLSSQKQGVENGISTPQVRKSPPDLRKSPPGTSDPVVPKPVPSPLPAPAAAVEKDETNHEEHPAPAAAKDTEDVSPAPGSLNSSVNPPEPPQGPAEEPPAPSPSSAPVSPAQSPAPQPSSAVFQYKVHRAGASSAEPPCAPGSAEPPCAPGSAKPPCAPGPAEPPCPGSSGRSPPDTSGAGQEEVLIHPVTGERVERGSPMALLLAARQRAQRGRQGGDGAAALRAKPALRLGSASSDTTSPSFFRHESKPFSFTVVPRPSLGCSGSKAPSFSSSSEQGRDARAAGQAQPPGPRRAAASSLLRGLLDSGQPSRPGPAQHGTPSEEENGDAALDFGIIPPPPEFSNEADEGPLPSREESRKCPSVPDSSRGSGEPRYYRWAGYSRSYGGSQEPAAPLPSEKSWRNGDFTPQYPAYSSSTSFPSHGPNPRPLIKKRLYMSEPDSSYPRAAAAPRASGTLSSYGPGGFSSTPGEGSRRLGPPHRNGPSSAQGRRVSTDAAGKPTAYGGTAAEAKFKGQNGDFSPASVLTASRPAHGTSHYGGPSNTFTVRPGTRQPISYAHQSHR
SIO_010081: C26H6orf132
subclass of: SO_0000673
so part of: C26H6orf132
location: complement(join(671207..671309,671710..674659,674933..675008,678473..678588,682386..682536))
location: region:671207-682536:-1
so has part: feature:682386-682536:-1:exon
so has part: feature:678473-678588:-1:exon
so has part: feature:674933-675008:-1:exon
so has part: feature:671710-674659:-1:exon
so has part: feature:671207-671309:-1:exon

XP_030147777.3
type: Protein
SIO_000068: ncbiprotein

position:671207:-1
position: 671207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:682536:-1
position: 682536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:682386-682536:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:678473-678588:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:674933-675008:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:671710-674659:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:671207-671309:-1:exon

GUCA1ANB
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: GUCA1ANB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 684989..687715
location: region:684989-687715:1
so has part: feature:684989-687715:1:exon
subclass of: SO_0000010

115498600
type: Gene
SIO_000068: ncbigene

position:684989:1
position: 684989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:687715:1
position: 687715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:684989-687715:1:exon

GUCA1ANB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: GUCA1ANB
product: GUCA1A neighbor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030292144.3
SIO_010081: GUCA1ANB
subclass of: SO_0000673
so part of: GUCA1ANB
location: join(684989..685074,687297..687715)
location: region:684989-687715:1
so has part: feature:684989-685074:1:exon
so has part: feature:687297-687715:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:684989-685074:1:exon

position:685074:1
position: 685074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:687297-687715:1:exon

position:687297:1
position: 687297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GUCA1ANB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: GUCA1ANB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative uncharacterized protein GUCA1ANB
translation: MEEAQAELQTASPPPRLRTRPPPAAALGSRFVPVVAHAGGRPLSSFHFVFHQPGWPNSLAPFRTAQKPSCGPHCPPGTIHGRQRLDVPSADPGQWRSFHGPRPGAAQNQQ
SIO_010081: GUCA1ANB
subclass of: SO_0000673
so part of: GUCA1ANB
location: 687346..687678
location: region:687346-687678:1
so has part: feature:687346-687678:1:exon

XP_030148004.3
type: Protein
SIO_000068: ncbiprotein

position:687346:1
position: 687346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:687678:1
position: 687678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:687346-687678:1:exon

LOC115492493
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC115492493
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 689446..693393
location: region:689446-693393:1
so has part: feature:689446-693393:1:exon
subclass of: SO_0000010

115492493
type: Gene
SIO_000068: ncbigene

position:689446:1
position: 689446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:693393:1
position: 693393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:689446-693393:1:exon

LOC115492493
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC115492493
product: guanylyl cyclase-activating protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030261459.3
SIO_010081: LOC115492493
subclass of: SO_0000673
so part of: LOC115492493
location: join(689446..689659,691762..691911,692488..692578,693166..693393)
location: region:689446-693393:1
so has part: feature:689446-689659:1:exon
so has part: feature:691762-691911:1:exon
so has part: feature:692488-692578:1:exon
so has part: feature:693166-693393:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:689446-689659:1:exon

position:689659:1
position: 689659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:691762-691911:1:exon

position:691762:1
position: 691762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:691911:1
position: 691911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:692488-692578:1:exon

position:692488:1
position: 692488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:692578:1
position: 692578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:693166-693393:1:exon

position:693166:1
position: 693166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115492493
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC115492493
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: guanylyl cyclase-activating protein 1
translation: MGNMDGKTVEELSTTECHQWYKKFMTECPSGQLTLYEFKQFFGLKNLSPAANKYVEQMFETFDFNKDGYIDFMEYVAALSLVLKGKVDQKLRWYFKLYDVDGNGCIDRAELLNIIKAIRSINRCNETMTAEEFTDMVFNKIDINGDGELSLEEFMEGVQKDEMLLDILTRSLDLTHIVRLIQNDGKNPHEGGEDAQAAP
SIO_010081: LOC115492493
subclass of: SO_0000673
so part of: LOC115492493
location: join(689462..689659,691762..691911,692488..692578,693166..693326)
location: region:689462-693326:1
so has part: feature:689462-689659:1:exon
so has part: feature:691762-691911:1:exon
so has part: feature:692488-692578:1:exon
so has part: feature:693166-693326:1:exon

XP_030117319.1
type: Protein
SIO_000068: ncbiprotein

position:689462:1
position: 689462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:693326:1
position: 693326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:689462-689659:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:691762-691911:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:692488-692578:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:693166-693326:1:exon

GUCA1B
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: GUCA1B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(698396..702100)
location: region:698396-702100:-1
so has part: feature:698396-702100:-1:exon
subclass of: SO_0000010

115492489
type: Gene
SIO_000068: ncbigene

position:698396:-1
position: 698396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:702100:-1
position: 702100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:698396-702100:-1:exon

GUCA1B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: GUCA1B
product: guanylate cyclase activator 1B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_030261444.3
SIO_010081: GUCA1B
subclass of: SO_0000673
so part of: GUCA1B
location: complement(join(698396..698876,699387..699501,700278..700427,701686..702100))
location: region:698396-702100:-1
so has part: feature:701686-702100:-1:exon
so has part: feature:700278-700427:-1:exon
so has part: feature:699387-699501:-1:exon
so has part: feature:698396-698876:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:701686-702100:-1:exon

position:701686:-1
position: 701686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:700278-700427:-1:exon

position:700278:-1
position: 700278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:700427:-1
position: 700427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:699387-699501:-1:exon

position:699387:-1
position: 699387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:699501:-1
position: 699501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:698396-698876:-1:exon

position:698876:-1
position: 698876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GUCA1B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: GUCA1B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: guanylyl cyclase-activating protein 2
translation: MGQQFTNAEGEQGEIDVAELQEWYKKFVVECPSGTLFMHEFKRFFGVQDNQEAAEYVENMFRAFDKNGDNTIDFLEYVAALNLVLRGKLEHKLRWTFKVYDKDGNGCIDKPELLEIVESIYRLKKVCWSEVEDRTPLLTPEEVVDRIFQLVDENGDGQLSLDEFIDGARKDKWVMKMLQMDVNPGGWITEQRRKSALF
SIO_010081: GUCA1B
subclass of: SO_0000673
so part of: GUCA1B
location: complement(join(698749..698876,699387..699501,700278..700427,701686..701889))
location: region:698749-701889:-1
so has part: feature:701686-701889:-1:exon
so has part: feature:700278-700427:-1:exon
so has part: feature:699387-699501:-1:exon
so has part: feature:698749-698876:-1:exon

XP_030117304.1
type: Protein
SIO_000068: ncbiprotein

position:698749:-1
position: 698749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:701889:-1
position: 701889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:701686-701889:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:700278-700427:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:699387-699501:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:698749-698876:-1:exon

IRF6
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: IRF6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 706634..714003
location: region:706634-714003:1
so has part: feature:706634-714003:1:exon
subclass of: SO_0000010

115492492
type: Gene
SIO_000068: ncbigene

position:706634:1
position: 706634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:714003:1
position: 714003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:706634-714003:1:exon

IRF6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: IRF6
product: interferon regulatory factor 6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 1 long SRA read, 19 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_030261455.3
SIO_010081: IRF6
subclass of: SO_0000673
so part of: IRF6
location: join(706634..706731,710025..710201,711052..711256,711677..711799,711903..712049,712277..712669,713038..713156,713450..714003)
location: region:706634-714003:1
so has part: feature:706634-706731:1:exon
so has part: feature:710025-710201:1:exon
so has part: feature:711052-711256:1:exon
so has part: feature:711677-711799:1:exon
so has part: feature:711903-712049:1:exon
so has part: feature:712277-712669:1:exon
so has part: feature:713038-713156:1:exon
so has part: feature:713450-714003:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:706634-706731:1:exon

position:706731:1
position: 706731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:710025-710201:1:exon

position:710025:1
position: 710025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:710201:1
position: 710201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:711052-711256:1:exon

position:711052:1
position: 711052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:711256:1
position: 711256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:711677-711799:1:exon

position:711677:1
position: 711677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:711799:1
position: 711799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:711903-712049:1:exon

position:711903:1
position: 711903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:712049:1
position: 712049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:712277-712669:1:exon

position:712277:1
position: 712277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:712669:1
position: 712669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:713038-713156:1:exon

position:713038:1
position: 713038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:713156:1
position: 713156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:713450-714003:1:exon

position:713450:1
position: 713450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

IRF6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: IRF6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interferon regulatory factor 6
translation: MALHPRRVRLKPWLVAQVDSGMYPGLIWLNREAKRFQIPWKHATRHSPQHEEENTIFKAWAVETGKYQEGVDEPDPAKWKAQLRCALNKSREFNLMYDGTKEVPMNPIKIYEVCDIPQSQGSIINPGSTGSAPWDEKDNDLDDEEEEELNQSQHVPIQETFPFLNINDSPMAPASAENCSSETVWPKNEPLDMEMPPTALQHDFFSSPELWISSLPMTDLEIKFEYRGKETGPTTTVSNPQGCRLFYGELGPMPDQEELFGPISLEQVKFPGTEQITNERQKVFTSRLLDVMDRGLILEVSGHAIYAVRLCQCKVYWSGPCAPSSTTPNLIERQKKVKLFCLETFLSELIAHQKGQIEKQPPYEIYFCFGEEWPDGKPRERKLIVVQVIPVVARMIYEMFSGDFTRSFDSGSVRLQISTPDIKDNIVAHLKQLYRLLQNHQEGWPMQAPALHMAQPLPAQ
SIO_010081: IRF6
subclass of: SO_0000673
so part of: IRF6
location: join(710028..710201,711052..711256,711677..711799,711903..712049,712277..712669,713038..713156,713450..713671)
location: region:710028-713671:1
so has part: feature:710028-710201:1:exon
so has part: feature:711052-711256:1:exon
so has part: feature:711677-711799:1:exon
so has part: feature:711903-712049:1:exon
so has part: feature:712277-712669:1:exon
so has part: feature:713038-713156:1:exon
so has part: feature:713450-713671:1:exon

XP_030117315.1
type: Protein
SIO_000068: ncbiprotein

position:710028:1
position: 710028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:713671:1
position: 713671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:710028-710201:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:711052-711256:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:711677-711799:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:711903-712049:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:712277-712669:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:713038-713156:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:713450-713671:1:exon

C26H1orf74
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: C26H1orf74
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 714899..716065
location: region:714899-716065:1
so has part: feature:714899-716065:1:exon
subclass of: SO_0000010

100230725
type: Gene
SIO_000068: ncbigene

position:714899:1
position: 714899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:716065:1
position: 716065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:714899-716065:1:exon

C26H1orf74
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: C26H1orf74
product: chromosome 26 C1orf74 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_012570985.4
SIO_010081: C26H1orf74
subclass of: SO_0000673
so part of: C26H1orf74
location: 714899..716065
location: region:714899-716065:1
so has part: feature:714899-716065:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:714899-716065:1:exon

C26H1orf74
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: C26H1orf74
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UPF0739 protein C1orf74 homolog
translation: MAAGLGPVPVPVPVPVPLPVPLPVPLLVAAAREAQGPGRRRQRLPAARALQAAGEVLAVAAGLKPALLWECGPAGAAELRRYLQRLRAAGLLAARLHVLALGGSALVLRPGPALARLLRARPAPLLDVSAARGRPALLGPAEARALRRRLAALLGRLRHAEAAAAEPVTASEAAAGEWSPCAVAGVLLGYPAVYSLAEGAENCLALTPLRVFTAQAACPRIKDGLRVRICSFSVPESLCAELRDLLDAWCRELREAFAAQSDFVDLCISSEVVSLPAVAL
SIO_010081: C26H1orf74
subclass of: SO_0000673
so part of: C26H1orf74
location: 714920..715762
location: region:714920-715762:1
so has part: feature:714920-715762:1:exon

XP_012426439.4
type: Protein
SIO_000068: ncbiprotein

position:714920:1
position: 714920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:715762:1
position: 715762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:714920-715762:1:exon

TRAF3IP3
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: TRAF3IP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(716485..726706)
location: region:716485-726706:-1
so has part: feature:716485-726706:-1:exon
subclass of: SO_0000010

115492490
type: Gene
SIO_000068: ncbigene

position:716485:-1
position: 716485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:726706:-1
position: 726706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:716485-726706:-1:exon

TRAF3IP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: TRAF3IP3
product: TRAF3 interacting protein 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_032753083.2
SIO_010081: TRAF3IP3
subclass of: SO_0000673
so part of: TRAF3IP3
location: complement(join(716485..716723,717878..718047,718566..718625,718704..718766,719458..719593,719805..719942,720681..720821,721075..721146,723372..723467,723694..723723,723953..723977,724133..724190,724633..724735,725143..725467,725542..725689,726272..726398,726542..726706))
location: region:716485-726706:-1
so has part: feature:726542-726706:-1:exon
so has part: feature:726272-726398:-1:exon
so has part: feature:725542-725689:-1:exon
so has part: feature:725143-725467:-1:exon
so has part: feature:724633-724735:-1:exon
so has part: feature:724133-724190:-1:exon
so has part: feature:723953-723977:-1:exon
so has part: feature:723694-723723:-1:exon
so has part: feature:723372-723467:-1:exon
so has part: feature:721075-721146:-1:exon
so has part: feature:720681-720821:-1:exon
so has part: feature:719805-719942:-1:exon
so has part: feature:719458-719593:-1:exon
so has part: feature:718704-718766:-1:exon
so has part: feature:718566-718625:-1:exon
so has part: feature:717878-718047:-1:exon
so has part: feature:716485-716723:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:726542-726706:-1:exon

position:726542:-1
position: 726542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:726272-726398:-1:exon

position:726272:-1
position: 726272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:726398:-1
position: 726398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:725542-725689:-1:exon

position:725542:-1
position: 725542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:725689:-1
position: 725689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:725143-725467:-1:exon

position:725143:-1
position: 725143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:725467:-1
position: 725467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:724633-724735:-1:exon

position:724633:-1
position: 724633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:724735:-1
position: 724735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:724133-724190:-1:exon

position:724133:-1
position: 724133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:724190:-1
position: 724190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:723953-723977:-1:exon

position:723953:-1
position: 723953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:723977:-1
position: 723977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:723694-723723:-1:exon

position:723694:-1
position: 723694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:723723:-1
position: 723723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:723372-723467:-1:exon

position:723372:-1
position: 723372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:723467:-1
position: 723467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:721075-721146:-1:exon

position:721075:-1
position: 721075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:721146:-1
position: 721146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:720681-720821:-1:exon

position:720681:-1
position: 720681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:720821:-1
position: 720821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:719805-719942:-1:exon

position:719805:-1
position: 719805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:719942:-1
position: 719942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:719458-719593:-1:exon

position:719458:-1
position: 719458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:719593:-1
position: 719593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:718704-718766:-1:exon

position:718704:-1
position: 718704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:718766:-1
position: 718766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:718566-718625:-1:exon

position:718566:-1
position: 718566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:718625:-1
position: 718625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:717878-718047:-1:exon

position:717878:-1
position: 717878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:718047:-1
position: 718047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:716485-716723:-1:exon

position:716723:-1
position: 716723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TRAF3IP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: TRAF3IP3
product: TRAF3 interacting protein 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_032753080.2
SIO_010081: TRAF3IP3
subclass of: SO_0000673
so part of: TRAF3IP3
location: complement(join(716485..716723,716834..717082,717878..718047,718566..718625,718704..718766,719458..719593,719805..719942,720681..720821,721075..721146,723372..723467,723694..723723,723953..723977,724133..724190,724633..724735,725143..725467,725542..725689,726272..726398,726542..726701))
location: region:716485-726701:-1
so has part: feature:726542-726701:-1:exon
so has part: feature:726272-726398:-1:exon
so has part: feature:725542-725689:-1:exon
so has part: feature:725143-725467:-1:exon
so has part: feature:724633-724735:-1:exon
so has part: feature:724133-724190:-1:exon
so has part: feature:723953-723977:-1:exon
so has part: feature:723694-723723:-1:exon
so has part: feature:723372-723467:-1:exon
so has part: feature:721075-721146:-1:exon
so has part: feature:720681-720821:-1:exon
so has part: feature:719805-719942:-1:exon
so has part: feature:719458-719593:-1:exon
so has part: feature:718704-718766:-1:exon
so has part: feature:718566-718625:-1:exon
so has part: feature:717878-718047:-1:exon
so has part: feature:716834-717082:-1:exon
so has part: feature:716485-716723:-1:exon

position:726701:-1
position: 726701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:726542-726701:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:726272-726398:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:725542-725689:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:725143-725467:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:724633-724735:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:724133-724190:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:723953-723977:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:723694-723723:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:723372-723467:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:721075-721146:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:720681-720821:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:719805-719942:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:719458-719593:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:718704-718766:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:718566-718625:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:717878-718047:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:716834-717082:-1:exon

position:716834:-1
position: 716834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:717082:-1
position: 717082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:716485-716723:-1:exon

TRAF3IP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: TRAF3IP3
product: TRAF3 interacting protein 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_032753082.2
SIO_010081: TRAF3IP3
subclass of: SO_0000673
so part of: TRAF3IP3
location: complement(join(716485..716723,716834..717082,717878..718047,718566..718625,718704..718766,719458..719593,719805..719942,720681..720821,721075..721146,723372..723467,723694..723723,723953..723977,724133..724190,724633..724735,725143..725444,726272..726398,726542..726700))
location: region:716485-726700:-1
so has part: feature:726542-726700:-1:exon
so has part: feature:726272-726398:-1:exon
so has part: feature:725143-725444:-1:exon
so has part: feature:724633-724735:-1:exon
so has part: feature:724133-724190:-1:exon
so has part: feature:723953-723977:-1:exon
so has part: feature:723694-723723:-1:exon
so has part: feature:723372-723467:-1:exon
so has part: feature:721075-721146:-1:exon
so has part: feature:720681-720821:-1:exon
so has part: feature:719805-719942:-1:exon
so has part: feature:719458-719593:-1:exon
so has part: feature:718704-718766:-1:exon
so has part: feature:718566-718625:-1:exon
so has part: feature:717878-718047:-1:exon
so has part: feature:716834-717082:-1:exon
so has part: feature:716485-716723:-1:exon

position:726700:-1
position: 726700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:726542-726700:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:726272-726398:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:725143-725444:-1:exon

position:725444:-1
position: 725444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:724633-724735:-1:exon

urn:…
SIO_000300: 5
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urn:…
SIO_000300: 6
SIO_000628: feature:723953-723977:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:723694-723723:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:723372-723467:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:721075-721146:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:720681-720821:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:719805-719942:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:719458-719593:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:718704-718766:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:718566-718625:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:717878-718047:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:716834-717082:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:716485-716723:-1:exon

TRAF3IP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: TRAF3IP3
product: TRAF3 interacting protein 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_041721298.1
SIO_010081: TRAF3IP3
subclass of: SO_0000673
so part of: TRAF3IP3
location: complement(join(716485..716723,716834..717082,717878..718047,718566..718625,718704..718766,719458..719593,719805..719942,720681..720821,721075..721146,723372..723467,723694..723723,723953..723977,724133..724190,724633..724735,725143..725444,725542..725689,726272..726398,726542..726700))
location: region:716485-726700:-1
so has part: feature:726542-726700:-1:exon
so has part: feature:726272-726398:-1:exon
so has part: feature:725542-725689:-1:exon
so has part: feature:725143-725444:-1:exon
so has part: feature:724633-724735:-1:exon
so has part: feature:724133-724190:-1:exon
so has part: feature:723953-723977:-1:exon
so has part: feature:723694-723723:-1:exon
so has part: feature:723372-723467:-1:exon
so has part: feature:721075-721146:-1:exon
so has part: feature:720681-720821:-1:exon
so has part: feature:719805-719942:-1:exon
so has part: feature:719458-719593:-1:exon
so has part: feature:718704-718766:-1:exon
so has part: feature:718566-718625:-1:exon
so has part: feature:717878-718047:-1:exon
so has part: feature:716834-717082:-1:exon
so has part: feature:716485-716723:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:726542-726700:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:726272-726398:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:725542-725689:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:725143-725444:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:724633-724735:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:724133-724190:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:723953-723977:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:723694-723723:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:723372-723467:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:721075-721146:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:720681-720821:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:719805-719942:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:719458-719593:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:718704-718766:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:718566-718625:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:717878-718047:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:716834-717082:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:716485-716723:-1:exon

TRAF3IP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: TRAF3IP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TRAF3-interacting JNK-activating modulator isoform X3
translation: MEASQIPCALGSAGQRPRGGDKATMPRRARPRPGESYEERSERRQQERERLRRRDRATSARAPRPPASSPRQREFLRRRNLAGPGGTLPGHPPGAPSPPEPSSRVEPRASIPLQPPRSCPTFPPARSRSRSPPSLSPPRAPGRSLHTQGMQTLPSPSSGVTDSSQQTDWGIAVLNKEMVQLSNYLKEALHRELLLKQKMVILQELLSTLLQASEKSWQGQLNEDKLRCKLRVLENQLQACTQSYSKECVKKILIEMEDQKEAYEQKAKEALQKIMEDKCLTEQQLENSQRSLAEMREDLALWKEHNAALQAELSSVTTAHSELTNSFQALQSELQRADAQSERLRRELRALRDERAELLQRAGVLRGDNDRQAGHIRHIQDKLQKEQEQKVTLEATISHLQNLIHNQNNQQKSQEVTVQRKDQVFTTQTPSLIPAKEKQSALSEHPEEEEEEEEEEGTESLKDEMQKRTFQLTAKENERRRGACIPLLLAVAAVAIAAFLASYGL
SIO_010081: TRAF3IP3
subclass of: SO_0000673
so part of: TRAF3IP3
location: complement(join(716640..716723,717878..718047,718566..718625,718704..718766,719458..719593,719805..719942,720681..720821,721075..721146,723372..723467,723694..723723,723953..723977,724133..724190,724633..724735,725143..725467,725542..725558))
location: region:716640-725558:-1
so has part: feature:725542-725558:-1:exon
so has part: feature:725143-725467:-1:exon
so has part: feature:724633-724735:-1:exon
so has part: feature:724133-724190:-1:exon
so has part: feature:723953-723977:-1:exon
so has part: feature:723694-723723:-1:exon
so has part: feature:723372-723467:-1:exon
so has part: feature:721075-721146:-1:exon
so has part: feature:720681-720821:-1:exon
so has part: feature:719805-719942:-1:exon
so has part: feature:719458-719593:-1:exon
so has part: feature:718704-718766:-1:exon
so has part: feature:718566-718625:-1:exon
so has part: feature:717878-718047:-1:exon
so has part: feature:716640-716723:-1:exon

XP_032608974.2
type: Protein
SIO_000068: ncbiprotein

position:716640:-1
position: 716640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:725558:-1
position: 725558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:725542-725558:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:725143-725467:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:724633-724735:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:724133-724190:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:723953-723977:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:723694-723723:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:723372-723467:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:721075-721146:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:720681-720821:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:719805-719942:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:719458-719593:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:718704-718766:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:718566-718625:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:717878-718047:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:716640-716723:-1:exon

TRAF3IP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: TRAF3IP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TRAF3-interacting JNK-activating modulator isoform X1
translation: MEASQIPCALGSAGQRPRGGDKATMPRRARPRPGESYEERSERRQQERERLRRRDRATSARAPRPPASSPRQREFLRRRNLAGPGGTLPGHPPGAPSPPEPSSRVEPRASIPLQPPRSCPTFPPARSRSRSPPSLSPPRAPGRSLHTQGMQTLPSPSSGVTDSSQQTDWGIAVLNKEMVQLSNYLKEALHRELLLKQKMVILQELLSTLLQASEKSWQGQLNEDKLRCKLRVLENQLQACTQSYSKECVKKILIEMEDQKEAYEQKAKEALQKIMEDKCLTEQQLENSQRSLAEMREDLALWKEHNAALQAELSSVTTAHSELTNSFQALQSELQRADAQSERLRRELRALRDERAELLQRAGVLRGDNDRQAGHIRHIQDKLQKEQEQKVTLEATISHLQNLIHNQNNQQKSQEVTVQRKDQVFTTQTPSLIPAKEKQSALSEHPEEEEEEEEEEGTESLKDEMQKRTFQLTAKENEVPEGARAEPGSARAQRCSGCSCPAAPGACRAPGSAPAESPWLCPQCSELRSELEALSQEYQSCLTRLRQCRDELNRCHGSQAQRRRGACIPLLLAVAAVAIAAFLASYGL
SIO_010081: TRAF3IP3
subclass of: SO_0000673
so part of: TRAF3IP3
location: complement(join(716640..716723,716834..717082,717878..718047,718566..718625,718704..718766,719458..719593,719805..719942,720681..720821,721075..721146,723372..723467,723694..723723,723953..723977,724133..724190,724633..724735,725143..725467,725542..725558))
location: region:716640-725558:-1
so has part: feature:725542-725558:-1:exon
so has part: feature:725143-725467:-1:exon
so has part: feature:724633-724735:-1:exon
so has part: feature:724133-724190:-1:exon
so has part: feature:723953-723977:-1:exon
so has part: feature:723694-723723:-1:exon
so has part: feature:723372-723467:-1:exon
so has part: feature:721075-721146:-1:exon
so has part: feature:720681-720821:-1:exon
so has part: feature:719805-719942:-1:exon
so has part: feature:719458-719593:-1:exon
so has part: feature:718704-718766:-1:exon
so has part: feature:718566-718625:-1:exon
so has part: feature:717878-718047:-1:exon
so has part: feature:716834-717082:-1:exon
so has part: feature:716640-716723:-1:exon

XP_032608971.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:725542-725558:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:725143-725467:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:724633-724735:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:724133-724190:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:723953-723977:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:723694-723723:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:723372-723467:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:721075-721146:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:720681-720821:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:719805-719942:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:719458-719593:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:718704-718766:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:718566-718625:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:717878-718047:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:716834-717082:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:716640-716723:-1:exon

TRAF3IP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: TRAF3IP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TRAF3-interacting JNK-activating modulator isoform X2
translation: MPRRARPRPGESYEERSERRQQERERLRRRDRATSARAPRPPASSPRQREFLRRRNLAGPGGTLPGHPPGAPSPPEPSSRVEPRASIPLQPPRSCPTFPPARSRSRSPPSLSPPRAPGRSLHTQGMQTLPSPSSGVTDSSQQTDWGIAVLNKEMVQLSNYLKEALHRELLLKQKMVILQELLSTLLQASEKSWQGQLNEDKLRCKLRVLENQLQACTQSYSKECVKKILIEMEDQKEAYEQKAKEALQKIMEDKCLTEQQLENSQRSLAEMREDLALWKEHNAALQAELSSVTTAHSELTNSFQALQSELQRADAQSERLRRELRALRDERAELLQRAGVLRGDNDRQAGHIRHIQDKLQKEQEQKVTLEATISHLQNLIHNQNNQQKSQEVTVQRKDQVFTTQTPSLIPAKEKQSALSEHPEEEEEEEEEEGTESLKDEMQKRTFQLTAKENEVPEGARAEPGSARAQRCSGCSCPAAPGACRAPGSAPAESPWLCPQCSELRSELEALSQEYQSCLTRLRQCRDELNRCHGSQAQRRRGACIPLLLAVAAVAIAAFLASYGL
SIO_010081: TRAF3IP3
subclass of: SO_0000673
so part of: TRAF3IP3
location: complement(join(716640..716723,716834..717082,717878..718047,718566..718625,718704..718766,719458..719593,719805..719942,720681..720821,721075..721146,723372..723467,723694..723723,723953..723977,724133..724190,724633..724735,725143..725412))
location: region:716640-725412:-1
so has part: feature:725143-725412:-1:exon
so has part: feature:724633-724735:-1:exon
so has part: feature:724133-724190:-1:exon
so has part: feature:723953-723977:-1:exon
so has part: feature:723694-723723:-1:exon
so has part: feature:723372-723467:-1:exon
so has part: feature:721075-721146:-1:exon
so has part: feature:720681-720821:-1:exon
so has part: feature:719805-719942:-1:exon
so has part: feature:719458-719593:-1:exon
so has part: feature:718704-718766:-1:exon
so has part: feature:718566-718625:-1:exon
so has part: feature:717878-718047:-1:exon
so has part: feature:716834-717082:-1:exon
so has part: feature:716640-716723:-1:exon

XP_041577232.1
type: Protein
SIO_000068: ncbiprotein

position:725412:-1
position: 725412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:725143-725412:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:724633-724735:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:724133-724190:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:723953-723977:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:723694-723723:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:723372-723467:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:721075-721146:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:720681-720821:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:719805-719942:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:719458-719593:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:718704-718766:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:718566-718625:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:717878-718047:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:716834-717082:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:716640-716723:-1:exon

TRAF3IP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: TRAF3IP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TRAF3-interacting JNK-activating modulator isoform X2
translation: MPRRARPRPGESYEERSERRQQERERLRRRDRATSARAPRPPASSPRQREFLRRRNLAGPGGTLPGHPPGAPSPPEPSSRVEPRASIPLQPPRSCPTFPPARSRSRSPPSLSPPRAPGRSLHTQGMQTLPSPSSGVTDSSQQTDWGIAVLNKEMVQLSNYLKEALHRELLLKQKMVILQELLSTLLQASEKSWQGQLNEDKLRCKLRVLENQLQACTQSYSKECVKKILIEMEDQKEAYEQKAKEALQKIMEDKCLTEQQLENSQRSLAEMREDLALWKEHNAALQAELSSVTTAHSELTNSFQALQSELQRADAQSERLRRELRALRDERAELLQRAGVLRGDNDRQAGHIRHIQDKLQKEQEQKVTLEATISHLQNLIHNQNNQQKSQEVTVQRKDQVFTTQTPSLIPAKEKQSALSEHPEEEEEEEEEEGTESLKDEMQKRTFQLTAKENEVPEGARAEPGSARAQRCSGCSCPAAPGACRAPGSAPAESPWLCPQCSELRSELEALSQEYQSCLTRLRQCRDELNRCHGSQAQRRRGACIPLLLAVAAVAIAAFLASYGL
SIO_010081: TRAF3IP3
subclass of: SO_0000673
so part of: TRAF3IP3
location: complement(join(716640..716723,716834..717082,717878..718047,718566..718625,718704..718766,719458..719593,719805..719942,720681..720821,721075..721146,723372..723467,723694..723723,723953..723977,724133..724190,724633..724735,725143..725412))
location: region:716640-725412:-1
so has part: feature:725143-725412:-1:exon
so has part: feature:724633-724735:-1:exon
so has part: feature:724133-724190:-1:exon
so has part: feature:723953-723977:-1:exon
so has part: feature:723694-723723:-1:exon
so has part: feature:723372-723467:-1:exon
so has part: feature:721075-721146:-1:exon
so has part: feature:720681-720821:-1:exon
so has part: feature:719805-719942:-1:exon
so has part: feature:719458-719593:-1:exon
so has part: feature:718704-718766:-1:exon
so has part: feature:718566-718625:-1:exon
so has part: feature:717878-718047:-1:exon
so has part: feature:716834-717082:-1:exon
so has part: feature:716640-716723:-1:exon

XP_032608973.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:725143-725412:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:724633-724735:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:724133-724190:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:723953-723977:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:723694-723723:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:723372-723467:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:721075-721146:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:720681-720821:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:719805-719942:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:719458-719593:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:718704-718766:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:718566-718625:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:717878-718047:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:716834-717082:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:716640-716723:-1:exon

LOC100225021
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC100225021
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(726925..729848)
location: region:726925-729848:-1
so has part: feature:726925-729848:-1:exon
subclass of: SO_0000010

100225021
type: Gene
SIO_000068: ncbigene

position:726925:-1
position: 726925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:729848:-1
position: 729848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:726925-729848:-1:exon

LOC100225021
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC100225021
product: corticosteroid 11-beta-dehydrogenase isozyme 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_002196384.4
SIO_010081: LOC100225021
subclass of: SO_0000673
so part of: LOC100225021
location: complement(join(726925..727584,727955..728098,728569..728754,728836..728947,729127..729257,729660..729848))
location: region:726925-729848:-1
so has part: feature:729660-729848:-1:exon
so has part: feature:729127-729257:-1:exon
so has part: feature:728836-728947:-1:exon
so has part: feature:728569-728754:-1:exon
so has part: feature:727955-728098:-1:exon
so has part: feature:726925-727584:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:729660-729848:-1:exon

position:729660:-1
position: 729660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:729127-729257:-1:exon

position:729127:-1
position: 729127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:729257:-1
position: 729257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:728836-728947:-1:exon

position:728836:-1
position: 728836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:728947:-1
position: 728947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:728569-728754:-1:exon

position:728569:-1
position: 728569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:728754:-1
position: 728754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:727955-728098:-1:exon

position:727955:-1
position: 727955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:728098:-1
position: 728098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:726925-727584:-1:exon

position:727584:-1
position: 727584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100225021
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC100225021
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: corticosteroid 11-beta-dehydrogenase isozyme 1
translation: MGLLLKVLIPLLGAALAFYFYSAPGKFSEEMLRGKRVIVTGASSGIGEQMAYHLARMEAHLLLTARTEARLQKVVERCLELGAASARYISGSMASPSLPEEVLREAENTWGGLDMLILNHIGQSSFTFFSGDVGHVRTLMETNFVSYVALATAALPLLKESEGSIVVVSSIAGKIAGPFTAPYSATKFALDGFFSSLRQELIIDKVNVSITLCILGYINTESAVRAVSHVIPQTPAPKEECALEIIRAGALRRRELHYPSPAVGSMLLLRSLAPELLDSLLLSSYRLENVRRT
SIO_010081: LOC100225021
subclass of: SO_0000673
so part of: LOC100225021
location: complement(join(727364..727584,727955..728098,728569..728754,728836..728947,729127..729257,729660..729747))
location: region:727364-729747:-1
so has part: feature:729660-729747:-1:exon
so has part: feature:729127-729257:-1:exon
so has part: feature:728836-728947:-1:exon
so has part: feature:728569-728754:-1:exon
so has part: feature:727955-728098:-1:exon
so has part: feature:727364-727584:-1:exon

XP_002196420.4
type: Protein
SIO_000068: ncbiprotein

position:727364:-1
position: 727364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:729747:-1
position: 729747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:729660-729747:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:729127-729257:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:728836-728947:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:728569-728754:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:727955-728098:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:727364-727584:-1:exon

LOC100222111
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC100222111
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(730580..736420)
location: region:730580-736420:-1
so has part: feature:730580-736420:-1:exon
subclass of: SO_0000010

100222111
type: Gene
SIO_000068: ncbigene

position:730580:-1
position: 730580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:736420:-1
position: 736420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:730580-736420:-1:exon

LOC100222111
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC100222111
product: corticosteroid 11-beta-dehydrogenase isozyme 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_030292143.3
SIO_010081: LOC100222111
subclass of: SO_0000673
so part of: LOC100222111
location: complement(join(730580..731074,731677..731820,732341..732526,733085..733196,735365..735495,736056..736420))
location: region:730580-736420:-1
so has part: feature:736056-736420:-1:exon
so has part: feature:735365-735495:-1:exon
so has part: feature:733085-733196:-1:exon
so has part: feature:732341-732526:-1:exon
so has part: feature:731677-731820:-1:exon
so has part: feature:730580-731074:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:736056-736420:-1:exon

position:736056:-1
position: 736056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:735365-735495:-1:exon

position:735365:-1
position: 735365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:735495:-1
position: 735495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:733085-733196:-1:exon

position:733085:-1
position: 733085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:733196:-1
position: 733196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:732341-732526:-1:exon

position:732341:-1
position: 732341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:732526:-1
position: 732526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:731677-731820:-1:exon

position:731677:-1
position: 731677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:731820:-1
position: 731820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:730580-731074:-1:exon

position:731074:-1
position: 731074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100222111
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC100222111
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: corticosteroid 11-beta-dehydrogenase isozyme 1
translation: MGRLKKILIPSLGLVLAFWFYSARDTFKPEMLRGKRVIVTGASTGIGEQMAYHLARMGSHVLLTARTEARLQNVVRRCLELGAASARFVSGTMEDTAFAQHVVREAQAVLGGLDMLILNHVGASYFGFFDGDVEHVRKLLEINFLSYVAMTTSALPMLKESEGSIVVVSSMAGKVGFPFTVPYSATKFALDGFFSSLRQEFAIQSINVSITLCILGFIDTERAVRAAAEVLAERPAPRDECALEILKGAALRRRELYYRYSSTRLPLLLRDCAAELLDYLVRSRYRLPATPGAPRPQH
SIO_010081: LOC100222111
subclass of: SO_0000673
so part of: LOC100222111
location: complement(join(730839..731074,731677..731820,732341..732526,733085..733196,735365..735495,736056..736143))
location: region:730839-736143:-1
so has part: feature:736056-736143:-1:exon
so has part: feature:735365-735495:-1:exon
so has part: feature:733085-733196:-1:exon
so has part: feature:732341-732526:-1:exon
so has part: feature:731677-731820:-1:exon
so has part: feature:730839-731074:-1:exon

XP_030148003.3
type: Protein
SIO_000068: ncbiprotein

position:730839:-1
position: 730839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:736143:-1
position: 736143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:736056-736143:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:735365-735495:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:733085-733196:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:732341-732526:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:731677-731820:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:730839-731074:-1:exon

G0S2
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: G0S2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(742183..743307)
location: region:742183-743307:-1
so has part: feature:742183-743307:-1:exon
subclass of: SO_0000010

100221069
type: Gene
SIO_000068: ncbigene

position:742183:-1
position: 742183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:743307:-1
position: 743307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:742183-743307:-1:exon

G0S2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: G0S2
product: G0/G1 switch 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 81 samples with support for all annotated introns
transcript id: XM_030292060.3
SIO_010081: G0S2
subclass of: SO_0000673
so part of: G0S2
location: complement(join(742183..742748,743136..743307))
location: region:742183-743307:-1
so has part: feature:743136-743307:-1:exon
so has part: feature:742183-742748:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:743136-743307:-1:exon

position:743136:-1
position: 743136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:742183-742748:-1:exon

position:742748:-1
position: 742748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

G0S2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: G0S2
product: G0/G1 switch 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 1 long SRA read, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 139 samples with support for all annotated introns
transcript id: XM_002198652.6
SIO_010081: G0S2
subclass of: SO_0000673
so part of: G0S2
location: complement(join(742183..742751,743136..743307))
location: region:742183-743307:-1
so has part: feature:743136-743307:-1:exon
so has part: feature:742183-742751:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:743136-743307:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:742183-742751:-1:exon

position:742751:-1
position: 742751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

G0S2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: G0S2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G0/G1 switch protein 2
translation: METVHELLPFAKEMLSQKPSRKMVKLYMLGSVLAFFGVVIGLVETVCSPFGSEASPEEERDKEKAAAAREQPEPQHREGLVLAKGKAAVPGLHRALVTRQHAS
SIO_010081: G0S2
subclass of: SO_0000673
so part of: G0S2
location: complement(742406..742717)
location: region:742406-742717:-1
so has part: feature:742406-742717:-1:exon

XP_002198688.3
type: Protein
SIO_000068: ncbiprotein

position:742406:-1
position: 742406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:742717:-1
position: 742717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:742406-742717:-1:exon

G0S2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: G0S2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G0/G1 switch protein 2
translation: METVHELLPFAKEMLSQKPSRKMVKLYMLGSVLAFFGVVIGLVETVCSPFGSEASPEEERDKEKAAAAREQPEPQHREGLVLAKGKAAVPGLHRALVTRQHAS
SIO_010081: G0S2
subclass of: SO_0000673
so part of: G0S2
location: complement(742406..742717)
location: region:742406-742717:-1
so has part: feature:742406-742717:-1:exon

XP_030147920.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:742406-742717:-1:exon

LAMB3
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LAMB3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 751099..771923
location: region:751099-771923:1
so has part: feature:751099-771923:1:exon
subclass of: SO_0000010

100219268
type: Gene
SIO_000068: ncbigene

position:751099:1
position: 751099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:771923:1
position: 771923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:751099-771923:1:exon

LAMB3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LAMB3
product: laminin subunit beta 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030291988.3
SIO_010081: LAMB3
subclass of: SO_0000673
so part of: LAMB3
location: join(751099..751399,751913..752000,752535..752689,758195..758309,758449..758522,758626..758805,759024..759087,759355..759530,760151..760271,760499..760687,760766..760921,761344..761543,762676..762787,763067..763439,764101..764261,765159..765367,766527..766730,767307..767451,768295..768502,769484..769625,769790..769966,770860..771013,771424..771923)
location: region:751099-771923:1
so has part: feature:751099-751399:1:exon
so has part: feature:751913-752000:1:exon
so has part: feature:752535-752689:1:exon
so has part: feature:758195-758309:1:exon
so has part: feature:758449-758522:1:exon
so has part: feature:758626-758805:1:exon
so has part: feature:759024-759087:1:exon
so has part: feature:759355-759530:1:exon
so has part: feature:760151-760271:1:exon
so has part: feature:760499-760687:1:exon
so has part: feature:760766-760921:1:exon
so has part: feature:761344-761543:1:exon
so has part: feature:762676-762787:1:exon
so has part: feature:763067-763439:1:exon
so has part: feature:764101-764261:1:exon
so has part: feature:765159-765367:1:exon
so has part: feature:766527-766730:1:exon
so has part: feature:767307-767451:1:exon
so has part: feature:768295-768502:1:exon
so has part: feature:769484-769625:1:exon
so has part: feature:769790-769966:1:exon
so has part: feature:770860-771013:1:exon
so has part: feature:771424-771923:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:751099-751399:1:exon

position:751399:1
position: 751399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:751913-752000:1:exon

position:751913:1
position: 751913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:752000:1
position: 752000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:752535-752689:1:exon

position:752535:1
position: 752535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:752689:1
position: 752689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:758195-758309:1:exon

position:758195:1
position: 758195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:758309:1
position: 758309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:758449-758522:1:exon

position:758449:1
position: 758449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:758522:1
position: 758522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:758626-758805:1:exon

position:758626:1
position: 758626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:758805:1
position: 758805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:759024-759087:1:exon

position:759024:1
position: 759024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:759087:1
position: 759087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:759355-759530:1:exon

position:759355:1
position: 759355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:759530:1
position: 759530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:760151-760271:1:exon

position:760151:1
position: 760151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:760271:1
position: 760271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:760499-760687:1:exon

position:760499:1
position: 760499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:760687:1
position: 760687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:760766-760921:1:exon

position:760766:1
position: 760766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:760921:1
position: 760921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:761344-761543:1:exon

position:761344:1
position: 761344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:761543:1
position: 761543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:762676-762787:1:exon

position:762676:1
position: 762676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:762787:1
position: 762787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:763067-763439:1:exon

position:763067:1
position: 763067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:763439:1
position: 763439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:764101-764261:1:exon

position:764101:1
position: 764101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:764261:1
position: 764261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:765159-765367:1:exon

position:765159:1
position: 765159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:765367:1
position: 765367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:766527-766730:1:exon

position:766527:1
position: 766527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:766730:1
position: 766730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:767307-767451:1:exon

position:767307:1
position: 767307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:767451:1
position: 767451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:768295-768502:1:exon

position:768295:1
position: 768295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:768502:1
position: 768502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:769484-769625:1:exon

position:769484:1
position: 769484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:769625:1
position: 769625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:769790-769966:1:exon

position:769790:1
position: 769790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:769966:1
position: 769966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:770860-771013:1:exon

position:770860:1
position: 770860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:771013:1
position: 771013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:771424-771923:1:exon

position:771424:1
position: 771424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LAMB3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LAMB3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: laminin subunit beta-3
translation: MEPRCQLWPWAVLVLLGAPQLLAAQGSCSQGACYPVPGDLLLGRAPLLTASSTCGLSQPETYCTPHGQWSMKCCRCDSRLPHSYSGHRVENVLASAGRARWWQSQNGVPRVSLRLDLEQLFQLDSVVLHFRSPPAAMLIERSLDAGRTWQVLQYLASDCATTFPHVPPGPPEGWQDPRCQELRGHPLHGGTVKFSVRELGSAISSSSSQAIGKLGPFTNLRINFTELPHIPRQGYHAPSTFYAVTELQVLGSCFCHGHAERCGPGGEQHSTVPAGCVCQHNTAGPHCERCAALFNARPWAPAEDSDPHACQPCDCNGHASSCHFDPEVFQASGGAGGGVCDGCQHNTEGTNCERCRAGFFRDARRALSHPEACLPCECDPEGTVPGSVCDPATGRCVCKDNVQGDRCHLCKPGFAQLAAANPAGCRRCTCNALGTRQDTVPCDGDTGSCLCLPGVVGSDCGQCAAGHWGLGSGQGCRPCACDPRGSRSPHCNQFTGQCPCRDGFTGQTCSAVGQQQCPPRHYRDARGGCTECDCDFQGTEEAGCDRATGRCLCRAGVTGARCEQCQRGHCSSQSGCQPCHPCFHTYDGDIQRLRQRQAGLANATARLPAGTGGSRLGPRLSRAQGNLQQALGILGSPAGTQQGLARAGSVLAAIREQVRGINPNLHFLDDTASLLRELEALNSSLLATSSQFQSKKSQFESSRSTDLSGAFQTIRSASQSSSRASSLAKAAPGLLAQARESRRSAAGLQGDLAGDTAKLLALRGELASGPDLRPVINQVCGGARVEPCTPARCQGLLCPRDNSSVCGAGRPCHGLFPLASGALAAAGRAAEEFGSLSARLRDTAQLIQRTELSATQVQSSTRRLAERLGASRTHLQGDVRRVQQLLQRLRGILADKDTDPASIQEISESVLSLRLPVDAAAVRRRMTEIQKLAAELQCPEDILAQTAEDIARAKRLQQEAEQARNRANAVEASVEEVLGNLQRANTALLEAQGALRGSGSSLRFIRERVEEVEAVLGPAQGNVAAVGAGLAGLAGRLSQLQRGTEQNRLRAGDTRDTAGTAVQRASGAQQALAQVKELFSELQSRVGQGPALGEQGRRVQSIGREAQALFQETLGMVLRMETLESEIQEGNKALVSRMSRLSGLEEQVGRIRDSIKRRVAYYESCS
SIO_010081: LAMB3
subclass of: SO_0000673
so part of: LAMB3
location: join(751952..752000,752535..752689,758195..758309,758449..758522,758626..758805,759024..759087,759355..759530,760151..760271,760499..760687,760766..760921,761344..761543,762676..762787,763067..763439,764101..764261,765159..765367,766527..766730,767307..767451,768295..768502,769484..769625,769790..769966,770860..771013,771424..771560)
location: region:751952-771560:1
so has part: feature:751952-752000:1:exon
so has part: feature:752535-752689:1:exon
so has part: feature:758195-758309:1:exon
so has part: feature:758449-758522:1:exon
so has part: feature:758626-758805:1:exon
so has part: feature:759024-759087:1:exon
so has part: feature:759355-759530:1:exon
so has part: feature:760151-760271:1:exon
so has part: feature:760499-760687:1:exon
so has part: feature:760766-760921:1:exon
so has part: feature:761344-761543:1:exon
so has part: feature:762676-762787:1:exon
so has part: feature:763067-763439:1:exon
so has part: feature:764101-764261:1:exon
so has part: feature:765159-765367:1:exon
so has part: feature:766527-766730:1:exon
so has part: feature:767307-767451:1:exon
so has part: feature:768295-768502:1:exon
so has part: feature:769484-769625:1:exon
so has part: feature:769790-769966:1:exon
so has part: feature:770860-771013:1:exon
so has part: feature:771424-771560:1:exon

XP_030147848.3
type: Protein
SIO_000068: ncbiprotein

position:751952:1
position: 751952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:771560:1
position: 771560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:751952-752000:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:752535-752689:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:758195-758309:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:758449-758522:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:758626-758805:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:759024-759087:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:759355-759530:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:760151-760271:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:760499-760687:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:760766-760921:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:761344-761543:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:762676-762787:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:763067-763439:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:764101-764261:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:765159-765367:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:766527-766730:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:767307-767451:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:768295-768502:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:769484-769625:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:769790-769966:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:770860-771013:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:771424-771560:1:exon

CAMK1G
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: CAMK1G
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(772261..782919)
location: region:772261-782919:-1
so has part: feature:772261-782919:-1:exon
subclass of: SO_0000010

105758886
type: Gene
SIO_000068: ncbigene

position:772261:-1
position: 772261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:782919:-1
position: 782919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:772261-782919:-1:exon

CAMK1G
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: CAMK1G
product: calcium/calmodulin dependent protein kinase IG
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 long SRA reads, 28 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 61 samples with support for all annotated introns
transcript id: XM_030261442.3
SIO_010081: CAMK1G
subclass of: SO_0000673
so part of: CAMK1G
location: complement(join(772261..772817,773294..773409,773800..774395,774821..774908,775624..775702,776516..776628,777267..777342,777838..777961,778115..778253,778792..778866,779112..779240,780732..780847,782765..782919))
location: region:772261-782919:-1
so has part: feature:782765-782919:-1:exon
so has part: feature:780732-780847:-1:exon
so has part: feature:779112-779240:-1:exon
so has part: feature:778792-778866:-1:exon
so has part: feature:778115-778253:-1:exon
so has part: feature:777838-777961:-1:exon
so has part: feature:777267-777342:-1:exon
so has part: feature:776516-776628:-1:exon
so has part: feature:775624-775702:-1:exon
so has part: feature:774821-774908:-1:exon
so has part: feature:773800-774395:-1:exon
so has part: feature:773294-773409:-1:exon
so has part: feature:772261-772817:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:782765-782919:-1:exon

position:782765:-1
position: 782765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:780732-780847:-1:exon

position:780732:-1
position: 780732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:780847:-1
position: 780847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:779112-779240:-1:exon

position:779112:-1
position: 779112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:779240:-1
position: 779240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:778792-778866:-1:exon

position:778792:-1
position: 778792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:778866:-1
position: 778866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:778115-778253:-1:exon

position:778115:-1
position: 778115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:778253:-1
position: 778253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:777838-777961:-1:exon

position:777838:-1
position: 777838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:777961:-1
position: 777961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:777267-777342:-1:exon

position:777267:-1
position: 777267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:777342:-1
position: 777342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:776516-776628:-1:exon

position:776516:-1
position: 776516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:776628:-1
position: 776628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:775624-775702:-1:exon

position:775624:-1
position: 775624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:775702:-1
position: 775702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:774821-774908:-1:exon

position:774821:-1
position: 774821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:774908:-1
position: 774908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:773800-774395:-1:exon

position:773800:-1
position: 773800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:774395:-1
position: 774395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:773294-773409:-1:exon

position:773294:-1
position: 773294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:773409:-1
position: 773409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:772261-772817:-1:exon

position:772817:-1
position: 772817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CAMK1G
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: CAMK1G
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium/calmodulin-dependent protein kinase type 1G
translation: MGRKEEDGSGSWKKQTSNIRKTFIFMEALGSGAFSEVFLVKQKSTGKLFALKCIKKSPLNRDSSLENEIAVLKKIKHENIVTLEDIYESTTHFYLVMQLVSGGELFDRILERGVYTEKDASLVILQVLTAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFIRHLLEKNPSARFTCEEALRHPWINGNTALHRDIYPSVSAQIQKNFAKSKWRQAFNAAAVVHHMKKLHMSGHGAAEGSVPATETSEPPRPRSPTGTPPPAAPSGDKDTAQGHPHPPQPPQPQQDTGMGEEKPPSPPKEGPLPRDSSLALQDTPSPPKEGPLPRDSSLALQDTPSPPKEGPLPRDSSLALLDTHSPPKEGPLPGDSSLALPDTHSPPGRSSCGCSPSCVGHEKTKTSSCSETVLLKRSSKSHHFKSEVLVPMKTSKHSSHCGTGQTGVCLLM
SIO_010081: CAMK1G
subclass of: SO_0000673
so part of: CAMK1G
location: complement(join(773316..773409,773800..774395,774821..774908,775624..775702,776516..776628,777267..777342,777838..777961,778115..778253,778792..778866,779112..779240,780732..780823))
location: region:773316-780823:-1
so has part: feature:780732-780823:-1:exon
so has part: feature:779112-779240:-1:exon
so has part: feature:778792-778866:-1:exon
so has part: feature:778115-778253:-1:exon
so has part: feature:777838-777961:-1:exon
so has part: feature:777267-777342:-1:exon
so has part: feature:776516-776628:-1:exon
so has part: feature:775624-775702:-1:exon
so has part: feature:774821-774908:-1:exon
so has part: feature:773800-774395:-1:exon
so has part: feature:773316-773409:-1:exon

XP_030117302.3
type: Protein
SIO_000068: ncbiprotein

position:773316:-1
position: 773316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:780823:-1
position: 780823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:780732-780823:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:779112-779240:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:778792-778866:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:778115-778253:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:777838-777961:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:777267-777342:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:776516-776628:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:775624-775702:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:774821-774908:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:773800-774395:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:773316-773409:-1:exon

PLXNA2
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: PLXNA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 979025..1109559
location: region:979025-1109559:1
so has part: feature:979025-1109559:1:exon
subclass of: SO_0000010

100228847
type: Gene
SIO_000068: ncbigene

position:979025:1
position: 979025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1109559:1
position: 1109559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:979025-1109559:1:exon

PLXNA2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: PLXNA2
product: plexin A2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_030291773.3
SIO_010081: PLXNA2
subclass of: SO_0000673
so part of: PLXNA2
location: join(979025..979253,992801..994055,994440..994622,1020972..1021106,1046179..1046279,1049424..1049547,1050372..1050525,1051666..1051762,1053559..1053673,1061635..1061835,1064034..1064130,1065005..1065198,1070463..1070614,1073672..1073789,1074209..1074345,1077305..1077472,1077971..1078064,1079180..1079269)
location: region:979025-1079269:1
so has part: feature:979025-979253:1:exon
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position:1079269:1
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urn:…
SIO_000300: 1
SIO_000628: feature:979025-979253:1:exon

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urn:…
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urn:…
SIO_000300: 3
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urn:…
SIO_000300: 4
SIO_000628: feature:1020972-1021106:1:exon

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urn:…
SIO_000300: 5
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urn:…
SIO_000300: 6
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urn:…
SIO_000300: 7
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urn:…
SIO_000300: 8
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urn:…
SIO_000300: 9
SIO_000628: feature:1053559-1053673:1:exon

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urn:…
SIO_000300: 10
SIO_000628: feature:1061635-1061835:1:exon

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urn:…
SIO_000300: 11
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urn:…
SIO_000300: 12
SIO_000628: feature:1065005-1065198:1:exon

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reference: sequence
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reference: sequence
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urn:…
SIO_000300: 13
SIO_000628: feature:1070463-1070614:1:exon

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reference: sequence
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urn:…
SIO_000300: 14
SIO_000628: feature:1073672-1073789:1:exon

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urn:…
SIO_000300: 15
SIO_000628: feature:1074209-1074345:1:exon

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urn:…
SIO_000300: 16
SIO_000628: feature:1077305-1077472:1:exon

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urn:…
SIO_000300: 17
SIO_000628: feature:1077971-1078064:1:exon

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urn:…
SIO_000300: 18
SIO_000628: feature:1079180-1079269:1:exon

position:1079180:1
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reference: sequence
type: ForwardStrandPosition
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PLXNA2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: PLXNA2
product: plexin A2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_041721368.1
SIO_010081: PLXNA2
subclass of: SO_0000673
so part of: PLXNA2
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location: region:979026-1078843:1
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position:979026:1
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reference: sequence
type: ForwardStrandPosition
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position:1078843:1
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reference: sequence
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urn:…
SIO_000300: 1
SIO_000628: feature:979026-979253:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:992801-994055:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:994440-994622:1:exon

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SIO_000300: 4
SIO_000628: feature:1020972-1021106:1:exon

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SIO_000300: 5
SIO_000628: feature:1046179-1046279:1:exon

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SIO_000300: 6
SIO_000628: feature:1049424-1049547:1:exon

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SIO_000300: 7
SIO_000628: feature:1050372-1050525:1:exon

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SIO_000300: 8
SIO_000628: feature:1051666-1051762:1:exon

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SIO_000300: 9
SIO_000628: feature:1053559-1053673:1:exon

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SIO_000300: 10
SIO_000628: feature:1061635-1061835:1:exon

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SIO_000300: 11
SIO_000628: feature:1064034-1064130:1:exon

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SIO_000300: 12
SIO_000628: feature:1065005-1065198:1:exon

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SIO_000300: 13
SIO_000628: feature:1070463-1070614:1:exon

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SIO_000300: 14
SIO_000628: feature:1073672-1073789:1:exon

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SIO_000300: 15
SIO_000628: feature:1074209-1074345:1:exon

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SIO_000300: 16
SIO_000628: feature:1077305-1077472:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1077971-1078064:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1078245-1078843:1:exon

position:1078245:1
position: 1078245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PLXNA2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: PLXNA2
product: plexin A2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 ESTs, 16 long SRA reads, 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 53 samples with support for all annotated introns
transcript id: XM_030291772.3
SIO_010081: PLXNA2
subclass of: SO_0000673
so part of: PLXNA2
location: join(979032..979253,992801..994055,994440..994622,1020972..1021106,1046179..1046279,1049424..1049547,1050372..1050525,1051666..1051762,1053559..1053673,1061635..1061835,1064034..1064130,1065005..1065198,1070463..1070614,1073672..1073789,1074209..1074345,1077305..1077472,1077971..1078064,1079624..1079863,1080021..1080164,1081255..1081489,1082923..1083065,1085074..1085342,1090464..1090530,1091119..1091265,1091581..1091740,1091854..1091957,1095882..1095981,1098066..1098256,1099351..1099520,1101381..1101593,1101893..1102043,1103403..1109559)
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position:979032:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 1
SIO_000628: feature:979032-979253:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:992801-994055:1:exon

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SIO_000300: 3
SIO_000628: feature:994440-994622:1:exon

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SIO_000300: 4
SIO_000628: feature:1020972-1021106:1:exon

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SIO_000300: 5
SIO_000628: feature:1046179-1046279:1:exon

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SIO_000300: 6
SIO_000628: feature:1049424-1049547:1:exon

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SIO_000300: 7
SIO_000628: feature:1050372-1050525:1:exon

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SIO_000300: 8
SIO_000628: feature:1051666-1051762:1:exon

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SIO_000300: 9
SIO_000628: feature:1053559-1053673:1:exon

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SIO_000300: 10
SIO_000628: feature:1061635-1061835:1:exon

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SIO_000300: 11
SIO_000628: feature:1064034-1064130:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1065005-1065198:1:exon

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SIO_000300: 13
SIO_000628: feature:1070463-1070614:1:exon

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SIO_000300: 14
SIO_000628: feature:1073672-1073789:1:exon

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SIO_000300: 15
SIO_000628: feature:1074209-1074345:1:exon

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SIO_000300: 16
SIO_000628: feature:1077305-1077472:1:exon

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SIO_000300: 17
SIO_000628: feature:1077971-1078064:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1079624-1079863:1:exon

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reference: sequence
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position:1079863:1
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reference: sequence
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urn:…
SIO_000300: 19
SIO_000628: feature:1080021-1080164:1:exon

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reference: sequence
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position:1080164:1
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reference: sequence
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urn:…
SIO_000300: 20
SIO_000628: feature:1081255-1081489:1:exon

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reference: sequence
type: ForwardStrandPosition
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position:1081489:1
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reference: sequence
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urn:…
SIO_000300: 21
SIO_000628: feature:1082923-1083065:1:exon

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reference: sequence
type: ForwardStrandPosition
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position:1083065:1
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reference: sequence
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urn:…
SIO_000300: 22
SIO_000628: feature:1085074-1085342:1:exon

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reference: sequence
type: ForwardStrandPosition
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position:1085342:1
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reference: sequence
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urn:…
SIO_000300: 23
SIO_000628: feature:1090464-1090530:1:exon

position:1090464:1
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reference: sequence
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position:1090530:1
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reference: sequence
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urn:…
SIO_000300: 24
SIO_000628: feature:1091119-1091265:1:exon

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reference: sequence
type: ForwardStrandPosition
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position:1091265:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 25
SIO_000628: feature:1091581-1091740:1:exon

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reference: sequence
type: ForwardStrandPosition
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position:1091740:1
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reference: sequence
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urn:…
SIO_000300: 26
SIO_000628: feature:1091854-1091957:1:exon

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reference: sequence
type: ForwardStrandPosition
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position:1091957:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 27
SIO_000628: feature:1095882-1095981:1:exon

position:1095882:1
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reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1095981:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 28
SIO_000628: feature:1098066-1098256:1:exon

position:1098066:1
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reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1098256:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 29
SIO_000628: feature:1099351-1099520:1:exon

position:1099351:1
position: 1099351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1099520:1
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reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:1101381-1101593:1:exon

position:1101381:1
position: 1101381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1101593:1
position: 1101593
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 31
SIO_000628: feature:1101893-1102043:1:exon

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reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1102043:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 32
SIO_000628: feature:1103403-1109559:1:exon

position:1103403:1
position: 1103403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PLXNA2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: PLXNA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: plexin-A2 isoform X1
translation: MDQRRNWPRVPDSDGWSVALLCLFLASLSRNVSSNASFNTFHSEHRDWTFNHLAVHRGTGAVYVGAINRVYKLSGNLTILVAHKTGPEEDNKSCYPPLIVQPCGEVLTLTNNVNKLLIIDYSENRLLACGSLYQGVCKLLRLDDLFILVEPSHKKEHYLSSVNKTGTMYGVIVRSEGEDGKLFIGTAVDGKQDYFPTLSSRKLPRDPESSAMLDYELHSDFVSSLIKIPSDTLALVSHFDIFYIYGFASGNFVYFLTVQPETPEGVSINSASDLFYTSRIVRLCKDDPKFHSYVSLPFGCVKGDTEYRLLQAAYLSKPGEVLARALNITAQEDVLFAIFSKGQKQYHHPPDDSALCAFPIRTVNAHIKERLRSCYQGEGNLELNWLLGKDVQCTKAPVPIDDNFCGLDINQPLGGSVPVDGVTLFTSSRDRLTSVASYVYNGYSVVFVGTKTGRLKKIRADGPPQGGIQYEVVPVFKDGSPVLRDMAFSTDHKYLYVMSERQVSRVPVESCEQYTTCQECLSSGDPHCGWCSLHHMCSPRDRCERAEEPFRFAGSIGQCLSVAVQPSSISVSEHSLTLSLRVSDAPDLSAGVSCIFGNLSEVEGQVSGSQVLCVSPAAKDVPAIPVDQDWFGVVLQLRSRETGRTFVSTEFKFYNCSAHQLCLSCVNSAFRCHWCKYRNLCTHDPTTCSFQEGRINISEDCPQLFPTEEILIPVGEVKPITLKARNLPQPQSGQRGYECVLSIQGIVHRVPALRFNSSSVQCQNSSYLYDGMDISNLAVDFAVVWNGNFVIDNPENLKVHLYKCAAQRESCGLCLKADPKFECGWCSGEAKCTLRPHCGSPGAQPWLDWSSHNVKCSNPRITEILTVSGPPEGGTRVTIRGVNLGLDFSEIAQGVQVAGVQCTPLPEHYVVAEQIVCEMGQALPGISSGPVLLCIGECQPEFTAKSAQQYMFVTPAVSFLSPSRGPESGGTMVTISGHYLGAGSRVSVLLGNQTCEFHERSMNEIVCVSAPSAHGLGAVQVSVSVDRAQLERTLLFEYIDDPKVQHIEPEWSIASGHTPLTVTGSNLDVIQEPRIRVKYNGKEFVNVCRVVNATALACLAPPLSAEYRPGLDAVERPDELGFIFNNVQSLLVYNDTKFIYYPNPTFEMLSSSGVLEQKPGSPIILKGRNLCPPAPGGAKLNYTVLIGETPCAVTVSETQLLCEPPTLTGQHRVTVRVGGVTFSPGSVSIVSDSLLTLPAIVSIAAGGSLLLIIVIIVLIAYKRKSRENDLTLKRLQMQMDNLESRVALECKEAFAELQTDINELTSDLDRSGIPYLDYRTYAMRVLFPGIEDHPVLRELEVQGNGQQSVEKALKLFAQLLNNKVFLLTFIRTLELQRSFSMRDRGNVASLIMTGLQGKLEYATDVLKQLLSDLIEKNLENKNHPKLLLRRTESVAEKMLTNWFAFLLHRFLKECAGEPLFMLYCAIKQQMEKGPIDAITGEARYSLSEDKLIRQQIEYKTLILNCVNPDNENSPEIPVKVLNCDTITQVKEKILDAVYKNVPYSQRPRAVDMDLEWRQGRIARVVLQDEDITTKIEGDWKRLNTLVHYQVSDRSVVALVPKQTSSYNIPASASISRTSISRYDSTFRYTGSPDSLRSRAPMITPDLESGVKVWHLVKNHDHGDQKEGDRGSKMVSEIYLTRLLATKGTLQKFVDDLFETLFSTVHRGSALPLAIKYMFDFLDEQADKHGIHDTDVRHTWKSNCLPLRFWVNVIKNPQFVFDIHKGSITDACLSVVAQTFMDSCSTSEHRLGKDSPSNKLLYAKDIPSYKSWVERYYADIAKLPAISDQDMNAYLAEQSRLHAVEFNMLSALNEIYSYVSKYSEELIGALEQDEQARRQRLAYKVEQLIGAMSFES
SIO_010081: PLXNA2
subclass of: SO_0000673
so part of: PLXNA2
location: join(992868..994055,994440..994622,1020972..1021106,1046179..1046279,1049424..1049547,1050372..1050525,1051666..1051762,1053559..1053673,1061635..1061835,1064034..1064130,1065005..1065198,1070463..1070614,1073672..1073789,1074209..1074345,1077305..1077472,1077971..1078064,1079624..1079863,1080021..1080164,1081255..1081489,1082923..1083065,1085074..1085342,1090464..1090530,1091119..1091265,1091581..1091740,1091854..1091957,1095882..1095981,1098066..1098256,1099351..1099520,1101381..1101593,1101893..1102043,1103403..1103498)
location: region:992868-1103498:1
so has part: feature:992868-994055:1:exon
so has part: feature:994440-994622:1:exon
so has part: feature:1020972-1021106:1:exon
so has part: feature:1046179-1046279:1:exon
so has part: feature:1049424-1049547:1:exon
so has part: feature:1050372-1050525:1:exon
so has part: feature:1051666-1051762:1:exon
so has part: feature:1053559-1053673:1:exon
so has part: feature:1061635-1061835:1:exon
so has part: feature:1064034-1064130:1:exon
so has part: feature:1065005-1065198:1:exon
so has part: feature:1070463-1070614:1:exon
so has part: feature:1073672-1073789:1:exon
so has part: feature:1074209-1074345:1:exon
so has part: feature:1077305-1077472:1:exon
so has part: feature:1077971-1078064:1:exon
so has part: feature:1079624-1079863:1:exon
so has part: feature:1080021-1080164:1:exon
so has part: feature:1081255-1081489:1:exon
so has part: feature:1082923-1083065:1:exon
so has part: feature:1085074-1085342:1:exon
so has part: feature:1090464-1090530:1:exon
so has part: feature:1091119-1091265:1:exon
so has part: feature:1091581-1091740:1:exon
so has part: feature:1091854-1091957:1:exon
so has part: feature:1095882-1095981:1:exon
so has part: feature:1098066-1098256:1:exon
so has part: feature:1099351-1099520:1:exon
so has part: feature:1101381-1101593:1:exon
so has part: feature:1101893-1102043:1:exon
so has part: feature:1103403-1103498:1:exon

XP_030147632.3
type: Protein
SIO_000068: ncbiprotein

position:992868:1
position: 992868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1103498:1
position: 1103498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:992868-994055:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:994440-994622:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1020972-1021106:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1046179-1046279:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1049424-1049547:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1050372-1050525:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1051666-1051762:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1053559-1053673:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1061635-1061835:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1064034-1064130:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1065005-1065198:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1070463-1070614:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1073672-1073789:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1074209-1074345:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1077305-1077472:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1077971-1078064:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1079624-1079863:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1080021-1080164:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1081255-1081489:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1082923-1083065:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1085074-1085342:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1090464-1090530:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1091119-1091265:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1091581-1091740:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1091854-1091957:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1095882-1095981:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1098066-1098256:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1099351-1099520:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1101381-1101593:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1101893-1102043:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1103403-1103498:1:exon

PLXNA2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: PLXNA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: plexin-A2 isoform X2
translation: MDQRRNWPRVPDSDGWSVALLCLFLASLSRNVSSNASFNTFHSEHRDWTFNHLAVHRGTGAVYVGAINRVYKLSGNLTILVAHKTGPEEDNKSCYPPLIVQPCGEVLTLTNNVNKLLIIDYSENRLLACGSLYQGVCKLLRLDDLFILVEPSHKKEHYLSSVNKTGTMYGVIVRSEGEDGKLFIGTAVDGKQDYFPTLSSRKLPRDPESSAMLDYELHSDFVSSLIKIPSDTLALVSHFDIFYIYGFASGNFVYFLTVQPETPEGVSINSASDLFYTSRIVRLCKDDPKFHSYVSLPFGCVKGDTEYRLLQAAYLSKPGEVLARALNITAQEDVLFAIFSKGQKQYHHPPDDSALCAFPIRTVNAHIKERLRSCYQGEGNLELNWLLGKDVQCTKAPVPIDDNFCGLDINQPLGGSVPVDGVTLFTSSRDRLTSVASYVYNGYSVVFVGTKTGRLKKIRADGPPQGGIQYEVVPVFKDGSPVLRDMAFSTDHKYLYVMSERQVSRVPVESCEQYTTCQECLSSGDPHCGWCSLHHMCSPRDRCERAEEPFRFAGSIGQCLSVAVQPSSISVSEHSLTLSLRVSDAPDLSAGVSCIFGNLSEVEGQVSGSQVLCVSPAAKDVPAIPVDQDWFGVVLQLRSRETGRTFVSTEFKFYNCSAHQLCLSCVNSAFRCHWCKYRNLCTHDPTTCSFQEGRINISEDCPQLFPTEEILIPVGEVKPITLKARNLPQPQSGQRGYECVLSIQGIVHRVPALRFNSSSVQCQNSSYLYDGMDISNLAVDFAVVWNGNFVIDNPENLKVHLYKCAAQRESCGLCLKADPKFECGWCSGEAKCTLRPHCGSPGAQPWLDWSSHNVKCSNPRITEILTVSGPPEGGTRVTIRGVNLGLDFSEIAQGVQVAGVQCTPLPEHYVVAEQIVCEMGQALPGISSGPVLLCIGECQPEFTAKSAQQYMFVTPAVSFLSPSRGPESGGTMVTISGHYLGAGSRVSVLLGNQTCEFHERSMNEIVCVSAPSAHGLGAVQVSVSVDRAQLERTLLFEYIDDPKVQHIEPEWSIASGHTPLTVTGSNLDVIQEPRIRVKYNGKEFVNVCRVVNTMAMGRALTRAEHSLPCL
SIO_010081: PLXNA2
subclass of: SO_0000673
so part of: PLXNA2
location: join(992868..994055,994440..994622,1020972..1021106,1046179..1046279,1049424..1049547,1050372..1050525,1051666..1051762,1053559..1053673,1061635..1061835,1064034..1064130,1065005..1065198,1070463..1070614,1073672..1073789,1074209..1074345,1077305..1077472,1077971..1078064,1079180..1079254)
location: region:992868-1079254:1
so has part: feature:992868-994055:1:exon
so has part: feature:994440-994622:1:exon
so has part: feature:1020972-1021106:1:exon
so has part: feature:1046179-1046279:1:exon
so has part: feature:1049424-1049547:1:exon
so has part: feature:1050372-1050525:1:exon
so has part: feature:1051666-1051762:1:exon
so has part: feature:1053559-1053673:1:exon
so has part: feature:1061635-1061835:1:exon
so has part: feature:1064034-1064130:1:exon
so has part: feature:1065005-1065198:1:exon
so has part: feature:1070463-1070614:1:exon
so has part: feature:1073672-1073789:1:exon
so has part: feature:1074209-1074345:1:exon
so has part: feature:1077305-1077472:1:exon
so has part: feature:1077971-1078064:1:exon
so has part: feature:1079180-1079254:1:exon

XP_030147633.3
type: Protein
SIO_000068: ncbiprotein

position:1079254:1
position: 1079254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:992868-994055:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:994440-994622:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1020972-1021106:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1046179-1046279:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1049424-1049547:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1050372-1050525:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1051666-1051762:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1053559-1053673:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1061635-1061835:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1064034-1064130:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1065005-1065198:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1070463-1070614:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1073672-1073789:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1074209-1074345:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1077305-1077472:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1077971-1078064:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1079180-1079254:1:exon

PLXNA2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: PLXNA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: plexin-A2 isoform X3
translation: MDQRRNWPRVPDSDGWSVALLCLFLASLSRNVSSNASFNTFHSEHRDWTFNHLAVHRGTGAVYVGAINRVYKLSGNLTILVAHKTGPEEDNKSCYPPLIVQPCGEVLTLTNNVNKLLIIDYSENRLLACGSLYQGVCKLLRLDDLFILVEPSHKKEHYLSSVNKTGTMYGVIVRSEGEDGKLFIGTAVDGKQDYFPTLSSRKLPRDPESSAMLDYELHSDFVSSLIKIPSDTLALVSHFDIFYIYGFASGNFVYFLTVQPETPEGVSINSASDLFYTSRIVRLCKDDPKFHSYVSLPFGCVKGDTEYRLLQAAYLSKPGEVLARALNITAQEDVLFAIFSKGQKQYHHPPDDSALCAFPIRTVNAHIKERLRSCYQGEGNLELNWLLGKDVQCTKAPVPIDDNFCGLDINQPLGGSVPVDGVTLFTSSRDRLTSVASYVYNGYSVVFVGTKTGRLKKIRADGPPQGGIQYEVVPVFKDGSPVLRDMAFSTDHKYLYVMSERQVSRVPVESCEQYTTCQECLSSGDPHCGWCSLHHMCSPRDRCERAEEPFRFAGSIGQCLSVAVQPSSISVSEHSLTLSLRVSDAPDLSAGVSCIFGNLSEVEGQVSGSQVLCVSPAAKDVPAIPVDQDWFGVVLQLRSRETGRTFVSTEFKFYNCSAHQLCLSCVNSAFRCHWCKYRNLCTHDPTTCSFQEGRINISEDCPQLFPTEEILIPVGEVKPITLKARNLPQPQSGQRGYECVLSIQGIVHRVPALRFNSSSVQCQNSSYLYDGMDISNLAVDFAVVWNGNFVIDNPENLKVHLYKCAAQRESCGLCLKADPKFECGWCSGEAKCTLRPHCGSPGAQPWLDWSSHNVKCSNPRITEILTVSGPPEGGTRVTIRGVNLGLDFSEIAQGVQVAGVQCTPLPEHYVVAEQIVCEMGQALPGISSGPVLLCIGECQPEFTAKSAQQYMFVTPAVSFLSPSRGPESGGTMVTISGHYLGAGSRVSVLLGNQTCEFHERSMNEIVCVSAPSAHGLGAVQVSVSVDRAQLERTLLFEYIDDPKVQHIEPEWSIASGHTPLTVTGSNLDVIQEPRIRVKYNGKEFVNSVGEKLR
SIO_010081: PLXNA2
subclass of: SO_0000673
so part of: PLXNA2
location: join(992868..994055,994440..994622,1020972..1021106,1046179..1046279,1049424..1049547,1050372..1050525,1051666..1051762,1053559..1053673,1061635..1061835,1064034..1064130,1065005..1065198,1070463..1070614,1073672..1073789,1074209..1074345,1077305..1077472,1077971..1078064,1078245..1078268)
location: region:992868-1078268:1
so has part: feature:992868-994055:1:exon
so has part: feature:994440-994622:1:exon
so has part: feature:1020972-1021106:1:exon
so has part: feature:1046179-1046279:1:exon
so has part: feature:1049424-1049547:1:exon
so has part: feature:1050372-1050525:1:exon
so has part: feature:1051666-1051762:1:exon
so has part: feature:1053559-1053673:1:exon
so has part: feature:1061635-1061835:1:exon
so has part: feature:1064034-1064130:1:exon
so has part: feature:1065005-1065198:1:exon
so has part: feature:1070463-1070614:1:exon
so has part: feature:1073672-1073789:1:exon
so has part: feature:1074209-1074345:1:exon
so has part: feature:1077305-1077472:1:exon
so has part: feature:1077971-1078064:1:exon
so has part: feature:1078245-1078268:1:exon

XP_041577302.1
type: Protein
SIO_000068: ncbiprotein

position:1078268:1
position: 1078268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:992868-994055:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:994440-994622:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1020972-1021106:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1046179-1046279:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1049424-1049547:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1050372-1050525:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1051666-1051762:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1053559-1053673:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1061635-1061835:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1064034-1064130:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1065005-1065198:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1070463-1070614:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1073672-1073789:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1074209-1074345:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1077305-1077472:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1077971-1078064:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1078245-1078268:1:exon

CD34
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: CD34
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1129686..1143704
location: region:1129686-1143704:1
so has part: feature:1129686-1143704:1:exon
subclass of: SO_0000010

100225996
type: Gene
SIO_000068: ncbigene

position:1129686:1
position: 1129686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1143704:1
position: 1143704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1129686-1143704:1:exon

CD34
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: CD34
product: CD34 molecule, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 46 samples with support for all annotated introns
transcript id: XM_030291777.3
SIO_010081: CD34
subclass of: SO_0000673
so part of: CD34
location: join(1129686..1130014,1135779..1135922,1136712..1136989,1137070..1137162,1139539..1139686,1140005..1140051,1140720..1140884,1141085..1141260)
location: region:1129686-1141260:1
so has part: feature:1129686-1130014:1:exon
so has part: feature:1135779-1135922:1:exon
so has part: feature:1136712-1136989:1:exon
so has part: feature:1137070-1137162:1:exon
so has part: feature:1139539-1139686:1:exon
so has part: feature:1140005-1140051:1:exon
so has part: feature:1140720-1140884:1:exon
so has part: feature:1141085-1141260:1:exon

position:1141260:1
position: 1141260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1129686-1130014:1:exon

position:1130014:1
position: 1130014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1135779-1135922:1:exon

position:1135779:1
position: 1135779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1135922:1
position: 1135922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1136712-1136989:1:exon

position:1136712:1
position: 1136712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1136989:1
position: 1136989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1137070-1137162:1:exon

position:1137070:1
position: 1137070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1137162:1
position: 1137162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1139539-1139686:1:exon

position:1139539:1
position: 1139539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1139686:1
position: 1139686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1140005-1140051:1:exon

position:1140005:1
position: 1140005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1140051:1
position: 1140051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1140720-1140884:1:exon

position:1140720:1
position: 1140720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1140884:1
position: 1140884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1141085-1141260:1:exon

position:1141085:1
position: 1141085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CD34
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: CD34
product: CD34 molecule, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 61 samples with support for all annotated introns
transcript id: XM_030291778.3
SIO_010081: CD34
subclass of: SO_0000673
so part of: CD34
location: join(1129686..1130014,1135779..1135922,1136712..1136989,1137070..1137162,1139539..1139686,1140005..1140051,1140720..1140884,1141088..1141260)
location: region:1129686-1141260:1
so has part: feature:1129686-1130014:1:exon
so has part: feature:1135779-1135922:1:exon
so has part: feature:1136712-1136989:1:exon
so has part: feature:1137070-1137162:1:exon
so has part: feature:1139539-1139686:1:exon
so has part: feature:1140005-1140051:1:exon
so has part: feature:1140720-1140884:1:exon
so has part: feature:1141088-1141260:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1129686-1130014:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1135779-1135922:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1136712-1136989:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1137070-1137162:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1139539-1139686:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1140005-1140051:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1140720-1140884:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1141088-1141260:1:exon

position:1141088:1
position: 1141088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CD34
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: CD34
product: CD34 molecule, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 1 long SRA read, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 86 samples with support for all annotated introns
transcript id: XM_030291776.3
SIO_010081: CD34
subclass of: SO_0000673
so part of: CD34
location: join(1129708..1130014,1135779..1135922,1136712..1136989,1137070..1137162,1139539..1139686,1140005..1140051,1140720..1140884,1142144..1143704)
location: region:1129708-1143704:1
so has part: feature:1129708-1130014:1:exon
so has part: feature:1135779-1135922:1:exon
so has part: feature:1136712-1136989:1:exon
so has part: feature:1137070-1137162:1:exon
so has part: feature:1139539-1139686:1:exon
so has part: feature:1140005-1140051:1:exon
so has part: feature:1140720-1140884:1:exon
so has part: feature:1142144-1143704:1:exon

position:1129708:1
position: 1129708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1129708-1130014:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1135779-1135922:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1136712-1136989:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1137070-1137162:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1139539-1139686:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1140005-1140051:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1140720-1140884:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1142144-1143704:1:exon

position:1142144:1
position: 1142144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CD34
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: CD34
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hematopoietic progenitor cell antigen CD34 isoform X1
translation: MKWRFLCIACLLELAGCTSGSTTATPSPAGTAVAVRDSGTGTASTATAATTAPGDTSSAMPTSAEGTAGSVATSPTSPGLLGQLRTSPQPSPAPTSLPGSSLGPQGRSGVPGSQSPPTQPQDGADTPGAPSSAATPEHPAVPATSTAPRATSASPQPPIPAIDCHRHPGQEGDSGAICLRLNESSTCEHFLQRKGSDLWQALCENRTHTVESPCEIQLTPSSLDRDCLLLILRGEKDPDKLLNTLQKSHWEKFGIESLQKEGARSHRDSSPKTLIALVTSGLLLAFLGLAGYFLMRRRSWSPAGQRLAEDPYYTENGSQGNTMLMCPSQEPAELQEKPNLPNLPNANGGTQENGTGSQNGRSGRQRDTDTEM
SIO_010081: CD34
subclass of: SO_0000673
so part of: CD34
location: join(1129969..1130014,1135779..1135922,1136712..1136989,1137070..1137162,1139539..1139686,1140005..1140051,1140720..1140884,1142144..1142341)
location: region:1129969-1142341:1
so has part: feature:1129969-1130014:1:exon
so has part: feature:1135779-1135922:1:exon
so has part: feature:1136712-1136989:1:exon
so has part: feature:1137070-1137162:1:exon
so has part: feature:1139539-1139686:1:exon
so has part: feature:1140005-1140051:1:exon
so has part: feature:1140720-1140884:1:exon
so has part: feature:1142144-1142341:1:exon

XP_030147636.3
type: Protein
SIO_000068: ncbiprotein

position:1129969:1
position: 1129969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1142341:1
position: 1142341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1129969-1130014:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1135779-1135922:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1136712-1136989:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1137070-1137162:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1139539-1139686:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1140005-1140051:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1140720-1140884:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1142144-1142341:1:exon

CD34
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: CD34
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hematopoietic progenitor cell antigen CD34 isoform X2
translation: MKWRFLCIACLLELAGCTSGSTTATPSPAGTAVAVRDSGTGTASTATAATTAPGDTSSAMPTSAEGTAGSVATSPTSPGLLGQLRTSPQPSPAPTSLPGSSLGPQGRSGVPGSQSPPTQPQDGADTPGAPSSAATPEHPAVPATSTAPRATSASPQPPIPAIDCHRHPGQEGDSGAICLRLNESSTCEHFLQRKGSDLWQALCENRTHTVESPCEIQLTPSSLDRDCLLLILRGEKDPDKLLNTLQKSHWEKFGIESLQKEGARSHRDSSPKTLIALVTSGLLLAFLGLAGYFLMRRRSWSPAGQRLQ
SIO_010081: CD34
subclass of: SO_0000673
so part of: CD34
location: join(1129969..1130014,1135779..1135922,1136712..1136989,1137070..1137162,1139539..1139686,1140005..1140051,1140720..1140884,1141085..1141090)
location: region:1129969-1141090:1
so has part: feature:1129969-1130014:1:exon
so has part: feature:1135779-1135922:1:exon
so has part: feature:1136712-1136989:1:exon
so has part: feature:1137070-1137162:1:exon
so has part: feature:1139539-1139686:1:exon
so has part: feature:1140005-1140051:1:exon
so has part: feature:1140720-1140884:1:exon
so has part: feature:1141085-1141090:1:exon

XP_030147637.3
type: Protein
SIO_000068: ncbiprotein

position:1141090:1
position: 1141090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1129969-1130014:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1135779-1135922:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1136712-1136989:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1137070-1137162:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1139539-1139686:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1140005-1140051:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1140720-1140884:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1141085-1141090:1:exon

CD34
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: CD34
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hematopoietic progenitor cell antigen CD34 isoform X3
translation: MKWRFLCIACLLELAGCTSGSTTATPSPAGTAVAVRDSGTGTASTATAATTAPGDTSSAMPTSAEGTAGSVATSPTSPGLLGQLRTSPQPSPAPTSLPGSSLGPQGRSGVPGSQSPPTQPQDGADTPGAPSSAATPEHPAVPATSTAPRATSASPQPPIPAIDCHRHPGQEGDSGAICLRLNESSTCEHFLQRKGSDLWQALCENRTHTVESPCEIQLTPSSLDRDCLLLILRGEKDPDKLLNTLQKSHWEKFGIESLQKEGARSHRDSSPKTLIALVTSGLLLAFLGLAGYFLMRRRSWSPAGQRL
SIO_010081: CD34
subclass of: SO_0000673
so part of: CD34
location: join(1129969..1130014,1135779..1135922,1136712..1136989,1137070..1137162,1139539..1139686,1140005..1140051,1140720..1140884,1141088..1141090)
location: region:1129969-1141090:1
so has part: feature:1129969-1130014:1:exon
so has part: feature:1135779-1135922:1:exon
so has part: feature:1136712-1136989:1:exon
so has part: feature:1137070-1137162:1:exon
so has part: feature:1139539-1139686:1:exon
so has part: feature:1140005-1140051:1:exon
so has part: feature:1140720-1140884:1:exon
so has part: feature:1141088-1141090:1:exon

XP_030147638.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1129969-1130014:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1135779-1135922:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1136712-1136989:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1137070-1137162:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1139539-1139686:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1140005-1140051:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1140720-1140884:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1141088-1141090:1:exon

LOC115498542
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC115498542
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1149926..1150628)
location: region:1149926-1150628:-1
so has part: feature:1149926-1150628:-1:exon
subclass of: SO_0000010

115498542
type: Gene
SIO_000068: ncbigene

position:1149926:-1
position: 1149926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1150628:-1
position: 1150628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1149926-1150628:-1:exon

LOC115498542
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC115498542
product: uncharacterized LOC115498542
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041721299.1
SIO_010081: LOC115498542
subclass of: SO_0000673
so part of: LOC115498542
location: complement(1149926..1150628)
location: region:1149926-1150628:-1
so has part: feature:1149926-1150628:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1149926-1150628:-1:exon

LOC115498542
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC115498542
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC115498542
translation: MCAGCAQDVRRDAAGCAQDVRGMCAGMQRGERGCGGDPGRCGGTSAEIQRDVRGMCAGMERDVRGMCAGMRRDVRGMSAEIQRDVRAVCAGMERDVRGMCAGCARAVLGPDPPAPRPRFSPGAASPARSRGAAAGWAGEEAAEPPRPSWIPRRGGGRGTKVTPQFPGGSETPGKGPGGAGQE
SIO_010081: LOC115498542
subclass of: SO_0000673
so part of: LOC115498542
location: complement(1150064..1150612)
location: region:1150064-1150612:-1
so has part: feature:1150064-1150612:-1:exon

XP_041577233.1
type: Protein
SIO_000068: ncbiprotein

position:1150064:-1
position: 1150064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1150612:-1
position: 1150612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1150064-1150612:-1:exon

LOC115498543
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC115498543
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1160915..1171919
location: region:1160915-1171919:1
so has part: feature:1160915-1171919:1:exon
subclass of: SO_0000011

115498543
type: Gene
SIO_000068: ncbigene

position:1160915:1
position: 1160915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1171919:1
position: 1171919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1160915-1171919:1:exon

LOC115498543
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC115498543
product: uncharacterized LOC115498543
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 69 samples with support for all annotated introns
transcript id: XR_003963832.3
SIO_010081: LOC115498543
subclass of: SO_0000673
so part of: LOC115498543
location: join(1160915..1161868,1164498..1171919)
location: region:1160915-1171919:1
so has part: feature:1160915-1161868:1:exon
so has part: feature:1164498-1171919:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1160915-1161868:1:exon

position:1161868:1
position: 1161868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1164498-1171919:1:exon

position:1164498:1
position: 1164498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MIR29B-2
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
alternative label: tgu-mir-29b-2
gene: MIR29B-2
gene synonym: tgu-mir-29b-2
note: microRNA mir-29b-2; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: 1172225..1172295
location: region:1172225-1172295:1
so has part: feature:1172225-1172295:1:exon
subclass of: SO_0000571

100886655
type: Gene
SIO_000068: ncbigene

MI0013831
type: miRBase
SIO_000068: mirbase

position:1172225:1
position: 1172225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1172295:1
position: 1172295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1172225-1172295:1:exon

MIR29B-2
type: Precursor RNA
subclass of: SO_0000185
RO_0002162: 59729
alternative label: tgu-mir-29b-2
gene: MIR29B-2
gene synonym: tgu-mir-29b-2
product: microRNA mir-29b-2
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NR_049139.1
SIO_010081: MIR29B-2
subclass of: SO_0000673
so part of: MIR29B-2
location: 1172225..1172295
location: region:1172225-1172295:1
so has part: feature:1172225-1172295:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1172225-1172295:1:exon

MIR29B-2
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
alternative label: tgu-mir-29b-2
nc RNA class: miRNA
gene: MIR29B-2
gene synonym: tgu-mir-29b-2
product: tgu-miR-29b-2-5p
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
SIO_010081: MIR29B-2
subclass of: SO_0000673
so part of: MIR29B-2
location: 1172226..1172247
location: region:1172226-1172247:1
so has part: feature:1172226-1172247:1:exon

MIMAT0014651
type: miRBase
SIO_000068: mirbase

position:1172226:1
position: 1172226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1172247:1
position: 1172247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1172226-1172247:1:exon

MIR29B-2
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
alternative label: tgu-mir-29b-2
nc RNA class: miRNA
gene: MIR29B-2
gene synonym: tgu-mir-29b-2
product: tgu-miR-29b-3p
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
SIO_010081: MIR29B-2
subclass of: SO_0000673
so part of: MIR29B-2
location: 1172265..1172285
location: region:1172265-1172285:1
so has part: feature:1172265-1172285:1:exon

MIMAT0014601
type: miRBase
SIO_000068: mirbase

position:1172265:1
position: 1172265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1172285:1
position: 1172285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1172265-1172285:1:exon

MIR29A-2
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
alternative label: tgu-mir-29a-2
gene: MIR29A-2
gene synonym: tgu-mir-29a-2
note: microRNA mir-29a-2; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: 1173188..1173258
location: region:1173188-1173258:1
so has part: feature:1173188-1173258:1:exon
subclass of: SO_0000571

100886610
type: Gene
SIO_000068: ncbigene

MI0013746
type: miRBase
SIO_000068: mirbase

position:1173188:1
position: 1173188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1173258:1
position: 1173258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1173188-1173258:1:exon

MIR29A-2
type: Precursor RNA
subclass of: SO_0000185
RO_0002162: 59729
alternative label: tgu-mir-29a-2
gene: MIR29A-2
gene synonym: tgu-mir-29a-2
product: microRNA mir-29a-2
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NR_049055.1
SIO_010081: MIR29A-2
subclass of: SO_0000673
so part of: MIR29A-2
location: 1173188..1173258
location: region:1173188-1173258:1
so has part: feature:1173188-1173258:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1173188-1173258:1:exon

MIR29A-2
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
alternative label: tgu-mir-29a-2
nc RNA class: miRNA
gene: MIR29A-2
gene synonym: tgu-mir-29a-2
product: tgu-miR-29a-2-5p
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
SIO_010081: MIR29A-2
subclass of: SO_0000673
so part of: MIR29A-2
location: 1173188..1173209
location: region:1173188-1173209:1
so has part: feature:1173188-1173209:1:exon

MIMAT0031063
type: miRBase
SIO_000068: mirbase

position:1173209:1
position: 1173209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1173188-1173209:1:exon

MIR29A-2
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
alternative label: tgu-mir-29a-2
nc RNA class: miRNA
gene: MIR29A-2
gene synonym: tgu-mir-29a-2
product: tgu-miR-29a-3p
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
SIO_010081: MIR29A-2
subclass of: SO_0000673
so part of: MIR29A-2
location: 1173228..1173248
location: region:1173228-1173248:1
so has part: feature:1173228-1173248:1:exon

MIMAT0014532
type: miRBase
SIO_000068: mirbase

position:1173228:1
position: 1173228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1173248:1
position: 1173248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1173228-1173248:1:exon

CR2
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: CR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1176541..1214660)
location: region:1176541-1214660:-1
so has part: feature:1176541-1214660:-1:exon
subclass of: SO_0000010

100232607
type: Gene
SIO_000068: ncbigene

position:1176541:-1
position: 1176541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1214660:-1
position: 1214660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1176541-1214660:-1:exon

CR2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: CR2
product: complement C3d receptor 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041721198.1
SIO_010081: CR2
subclass of: SO_0000673
so part of: CR2
location: complement(join(1176541..1176668,1177939..1177992,1178454..1178551,1180031..1180097,1180390..1180416,1180721..1180910,1180999..1181192,1181698..1181880,1182583..1182789,1183137..1183222,1183814..1183910,1184129..1184320,1185326..1185736,1187519..1187598,1187854..1187929,1188073..1188102,1188477..1188656,1188844..1189026,1189306..1189488,1190166..1190345,1191073..1191158,1191686..1191785,1192018..1192209,1192420..1192602,1193122..1193313,1194109..1194291,1194382..1194564,1194698..1194880,1195501..1195680,1196018..1196200,1196664..1196858,1197360..1197445,1197603..1197702,1197859..1198050,1198140..1198319,1198637..1198831,1199985..1200070,1200396..1200495,1200741..1200932,1201221..1201439,1201696..1201878,1202010..1202189,1202354..1202725,1203040..1203222,1203354..1203533,1203686..1203868,1204389..1204568,1205167..1205254,1208352..1208562,1209190..1209285,1209533..1209628,1209862..1210053,1210272..1210382,1210530..1210593,1210694..1210720,1210820..1210879,1211655..1211882,1212131..1212216,1212385..1212481,1212673..1212864,1213376..1213567,1214561..1214660))
location: region:1176541-1214660:-1
so has part: feature:1214561-1214660:-1:exon
so has part: feature:1213376-1213567:-1:exon
so has part: feature:1212673-1212864:-1:exon
so has part: feature:1212385-1212481:-1:exon
so has part: feature:1212131-1212216:-1:exon
so has part: feature:1211655-1211882:-1:exon
so has part: feature:1210820-1210879:-1:exon
so has part: feature:1210694-1210720:-1:exon
so has part: feature:1210530-1210593:-1:exon
so has part: feature:1210272-1210382:-1:exon
so has part: feature:1209862-1210053:-1:exon
so has part: feature:1209533-1209628:-1:exon
so has part: feature:1209190-1209285:-1:exon
so has part: feature:1208352-1208562:-1:exon
so has part: feature:1205167-1205254:-1:exon
so has part: feature:1204389-1204568:-1:exon
so has part: feature:1203686-1203868:-1:exon
so has part: feature:1203354-1203533:-1:exon
so has part: feature:1203040-1203222:-1:exon
so has part: feature:1202354-1202725:-1:exon
so has part: feature:1202010-1202189:-1:exon
so has part: feature:1201696-1201878:-1:exon
so has part: feature:1201221-1201439:-1:exon
so has part: feature:1200741-1200932:-1:exon
so has part: feature:1200396-1200495:-1:exon
so has part: feature:1199985-1200070:-1:exon
so has part: feature:1198637-1198831:-1:exon
so has part: feature:1198140-1198319:-1:exon
so has part: feature:1197859-1198050:-1:exon
so has part: feature:1197603-1197702:-1:exon
so has part: feature:1197360-1197445:-1:exon
so has part: feature:1196664-1196858:-1:exon
so has part: feature:1196018-1196200:-1:exon
so has part: feature:1195501-1195680:-1:exon
so has part: feature:1194698-1194880:-1:exon
so has part: feature:1194382-1194564:-1:exon
so has part: feature:1194109-1194291:-1:exon
so has part: feature:1193122-1193313:-1:exon
so has part: feature:1192420-1192602:-1:exon
so has part: feature:1192018-1192209:-1:exon
so has part: feature:1191686-1191785:-1:exon
so has part: feature:1191073-1191158:-1:exon
so has part: feature:1190166-1190345:-1:exon
so has part: feature:1189306-1189488:-1:exon
so has part: feature:1188844-1189026:-1:exon
so has part: feature:1188477-1188656:-1:exon
so has part: feature:1188073-1188102:-1:exon
so has part: feature:1187854-1187929:-1:exon
so has part: feature:1187519-1187598:-1:exon
so has part: feature:1185326-1185736:-1:exon
so has part: feature:1184129-1184320:-1:exon
so has part: feature:1183814-1183910:-1:exon
so has part: feature:1183137-1183222:-1:exon
so has part: feature:1182583-1182789:-1:exon
so has part: feature:1181698-1181880:-1:exon
so has part: feature:1180999-1181192:-1:exon
so has part: feature:1180721-1180910:-1:exon
so has part: feature:1180390-1180416:-1:exon
so has part: feature:1180031-1180097:-1:exon
so has part: feature:1178454-1178551:-1:exon
so has part: feature:1177939-1177992:-1:exon
so has part: feature:1176541-1176668:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1214561-1214660:-1:exon

position:1214561:-1
position: 1214561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1213376-1213567:-1:exon

position:1213376:-1
position: 1213376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1213567:-1
position: 1213567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1212673-1212864:-1:exon

position:1212673:-1
position: 1212673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1212864:-1
position: 1212864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1212385-1212481:-1:exon

position:1212385:-1
position: 1212385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1212481:-1
position: 1212481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1212131-1212216:-1:exon

position:1212131:-1
position: 1212131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1212216:-1
position: 1212216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1211655-1211882:-1:exon

position:1211655:-1
position: 1211655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1211882:-1
position: 1211882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1210820-1210879:-1:exon

position:1210820:-1
position: 1210820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1210879:-1
position: 1210879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1210694-1210720:-1:exon

position:1210694:-1
position: 1210694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1210720:-1
position: 1210720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1210530-1210593:-1:exon

position:1210530:-1
position: 1210530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1210593:-1
position: 1210593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1210272-1210382:-1:exon

position:1210272:-1
position: 1210272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1210382:-1
position: 1210382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1209862-1210053:-1:exon

position:1209862:-1
position: 1209862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1210053:-1
position: 1210053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1209533-1209628:-1:exon

position:1209533:-1
position: 1209533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1209628:-1
position: 1209628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1209190-1209285:-1:exon

position:1209190:-1
position: 1209190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1209285:-1
position: 1209285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1208352-1208562:-1:exon

position:1208352:-1
position: 1208352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1208562:-1
position: 1208562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1205167-1205254:-1:exon

position:1205167:-1
position: 1205167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1205254:-1
position: 1205254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1204389-1204568:-1:exon

position:1204389:-1
position: 1204389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1204568:-1
position: 1204568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1203686-1203868:-1:exon

position:1203686:-1
position: 1203686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1203868:-1
position: 1203868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1203354-1203533:-1:exon

position:1203354:-1
position: 1203354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1203533:-1
position: 1203533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1203040-1203222:-1:exon

position:1203040:-1
position: 1203040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1203222:-1
position: 1203222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1202354-1202725:-1:exon

position:1202354:-1
position: 1202354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1202725:-1
position: 1202725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1202010-1202189:-1:exon

position:1202010:-1
position: 1202010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1202189:-1
position: 1202189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1201696-1201878:-1:exon

position:1201696:-1
position: 1201696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1201878:-1
position: 1201878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1201221-1201439:-1:exon

position:1201221:-1
position: 1201221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1201439:-1
position: 1201439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1200741-1200932:-1:exon

position:1200741:-1
position: 1200741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1200932:-1
position: 1200932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1200396-1200495:-1:exon

position:1200396:-1
position: 1200396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1200495:-1
position: 1200495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1199985-1200070:-1:exon

position:1199985:-1
position: 1199985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1200070:-1
position: 1200070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1198637-1198831:-1:exon

position:1198637:-1
position: 1198637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1198831:-1
position: 1198831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:1198140-1198319:-1:exon

position:1198140:-1
position: 1198140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1198319:-1
position: 1198319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:1197859-1198050:-1:exon

position:1197859:-1
position: 1197859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1198050:-1
position: 1198050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:1197603-1197702:-1:exon

position:1197603:-1
position: 1197603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1197702:-1
position: 1197702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:1197360-1197445:-1:exon

position:1197360:-1
position: 1197360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1197445:-1
position: 1197445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:1196664-1196858:-1:exon

position:1196664:-1
position: 1196664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1196858:-1
position: 1196858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:1196018-1196200:-1:exon

position:1196018:-1
position: 1196018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1196200:-1
position: 1196200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:1195501-1195680:-1:exon

position:1195501:-1
position: 1195501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1195680:-1
position: 1195680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:1194698-1194880:-1:exon

position:1194698:-1
position: 1194698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1194880:-1
position: 1194880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:1194382-1194564:-1:exon

position:1194382:-1
position: 1194382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1194564:-1
position: 1194564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:1194109-1194291:-1:exon

position:1194109:-1
position: 1194109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1194291:-1
position: 1194291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:1193122-1193313:-1:exon

position:1193122:-1
position: 1193122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1193313:-1
position: 1193313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:1192420-1192602:-1:exon

position:1192420:-1
position: 1192420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1192602:-1
position: 1192602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:1192018-1192209:-1:exon

position:1192018:-1
position: 1192018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1192209:-1
position: 1192209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:1191686-1191785:-1:exon

position:1191686:-1
position: 1191686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1191785:-1
position: 1191785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 42
SIO_000628: feature:1191073-1191158:-1:exon

position:1191073:-1
position: 1191073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1191158:-1
position: 1191158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 43
SIO_000628: feature:1190166-1190345:-1:exon

position:1190166:-1
position: 1190166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1190345:-1
position: 1190345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 44
SIO_000628: feature:1189306-1189488:-1:exon

position:1189306:-1
position: 1189306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1189488:-1
position: 1189488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 45
SIO_000628: feature:1188844-1189026:-1:exon

position:1188844:-1
position: 1188844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1189026:-1
position: 1189026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 46
SIO_000628: feature:1188477-1188656:-1:exon

position:1188477:-1
position: 1188477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1188656:-1
position: 1188656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 47
SIO_000628: feature:1188073-1188102:-1:exon

position:1188073:-1
position: 1188073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1188102:-1
position: 1188102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 48
SIO_000628: feature:1187854-1187929:-1:exon

position:1187854:-1
position: 1187854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1187929:-1
position: 1187929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 49
SIO_000628: feature:1187519-1187598:-1:exon

position:1187519:-1
position: 1187519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1187598:-1
position: 1187598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 50
SIO_000628: feature:1185326-1185736:-1:exon

position:1185326:-1
position: 1185326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1185736:-1
position: 1185736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 51
SIO_000628: feature:1184129-1184320:-1:exon

position:1184129:-1
position: 1184129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1184320:-1
position: 1184320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 52
SIO_000628: feature:1183814-1183910:-1:exon

position:1183814:-1
position: 1183814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1183910:-1
position: 1183910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 53
SIO_000628: feature:1183137-1183222:-1:exon

position:1183137:-1
position: 1183137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1183222:-1
position: 1183222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 54
SIO_000628: feature:1182583-1182789:-1:exon

position:1182583:-1
position: 1182583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1182789:-1
position: 1182789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 55
SIO_000628: feature:1181698-1181880:-1:exon

position:1181698:-1
position: 1181698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1181880:-1
position: 1181880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 56
SIO_000628: feature:1180999-1181192:-1:exon

position:1180999:-1
position: 1180999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1181192:-1
position: 1181192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 57
SIO_000628: feature:1180721-1180910:-1:exon

position:1180721:-1
position: 1180721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1180910:-1
position: 1180910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 58
SIO_000628: feature:1180390-1180416:-1:exon

position:1180390:-1
position: 1180390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1180416:-1
position: 1180416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 59
SIO_000628: feature:1180031-1180097:-1:exon

position:1180031:-1
position: 1180031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1180097:-1
position: 1180097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 60
SIO_000628: feature:1178454-1178551:-1:exon

position:1178454:-1
position: 1178454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1178551:-1
position: 1178551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 61
SIO_000628: feature:1177939-1177992:-1:exon

position:1177939:-1
position: 1177939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1177992:-1
position: 1177992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 62
SIO_000628: feature:1176541-1176668:-1:exon

position:1176668:-1
position: 1176668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CR2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: CR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: complement receptor type 2
translation: MGSGRRCSLLLLLPALLVLPAAWGDCGPLPNISHAEPRGDTKHQQSFSVGSTVTFSCLPGYTKLPLLPDTIRCLSNSRWSSLPEFCGRSCPRPRSVSFAAISPEDKMQNFYAVNTTVRYICRQGYENTTAQPPTSTCLDNLTWTEVPKLCQKKSCGVPASPEHGQVILKDHQLGATASVVCDHGYRLKGASPSITCLLEGDKAVWSPLPACQVISCPPPPAIPHGQHSGNSSEGFVLGSVTTYSCEPGLELVGQDTLRCTAGGDSGDSGDSGDSGDSGTWSGALPTCRVKTTAKTNQTKPSEENPYWLASILIPSCIAPPIALGFVAGIIMRRKESEKHSYNVNLQKQEMKGRDAAMHPEVTDEKKQPKPWNSYFCHAGNCHVCPSCEEQLHGDLAPLSQPPHHGCAACRDWLSSQPQKPRTYSVPSVGDGDSQSAAGTSSPAKAVDVLRADGTVEVAPWWSEAEQPIDHQSDHVCPTCESWLRAHTGHGDSSAVTPGEWRDKGPQGPVCPPCTDRQLLSLVHGDTASSPVCPLAGEGTPAHLVPLHSPGCHLCPVCSAPSHAHLCQPQRLAPTLPLSGMVPILTLCLLGSSALLLSTVPGAQAALCPFPRVWHGTVSPRRYYYRTGDTVSVTCSPGYTLQGSRSSTCGAASRWDPPLPQCRKEVTCPRPPSIANGLPSGHPSGSFSRGVTVSYSCRPGFELLGNASVTCADSGLWSRPLPRCQAIGCQAPEVQNGKVHNVQSTYRAGETLHFDCHLGYAAEGSDEARCQPGGTWDPPVLVCHRVRPCPMPPEVANGKHNGQDKAFFTAGMAVRYSCDPGYYLVGNAAVSCRASGNWSQPRPRCEDTLCPEKPKERQETLRLLVGCRWQYLGFDPCVLPKCDMREDGAELAPQNHFSQTLMRFPPPCAEVTCPRPPSIANGLPSGHPSGSFSRGVTVSYSCRPGFELLGNASVTCADSGLWSRPLPRCQAIGCQAPEVQNGKVHNVQSTYRAGETLHFDCHLGYAAEGSDEARCQPGGTWDPPVLVCQRVRPCPMPPEVANGKHNGQDKAFFTAGMAVRYSCDPGYYLVGNAAVSCRASGNWSQPRPRCAGTVCLNPVVDNGRQVGGHGLLSAPGQTVTFRCHDGYSLQGSASVSCQEDGSWQPPAPVCARAPPHHSSFTTAPGACGAPTRLQFAELNEEHRNAIDFSVGKTVQYTCLPGYAKVPGMSPTLTCLEGGVWSEALEFCKRKQCGHPGEPVNGKIISLTNLQFGSTVVYRCEEGHRLIGQASRRCEISGGGVAWTGHVPLCQRIPCEPPPDIPHGQHSGRLLSEFHYGTAVSYSCQPGFPLHGHPSIHCTTRDGYSGVWSEPLPACGESSCPVPQIQHGRIVAARSAYSHRDTVTFECEPGYAIRGHREIQCQPNNTWEPPVPVCEQAGCRAPARLGFAELKEPYRNRTVFPEGSRVELVCQPGYTQLPGASAAITCLRNQTWSAALDFCKRKQCPSPGNPANGRAVVLTDLLFGSKINYTCDKGYKLVGGSQRICEVSGTHVSWSGDPPVCQRLTCAPPPAIPHGTHSGGSRDSFSLGDVVTYTCASGLALAGGASLSCTSVDGQHGTWSGAVPRCQEVTCPAPPSIANGQHGASPGARHSPGSLVLYTCAEGYSLLGNASIRCTAKGTWSRPQPRCRAIGCTRPEMENGKVTGSETTYNLEDIVIFECNFGYALKGSQESQCQFGGKWHPPVPTCEKLPSCPSPPSIRNGHHDSKDVTEFIPGMAVKYHCDPGYVLTGKTTVSCLPSGDWSIPYPWCEVITCSSPSIKDGEVAEGRRAVYHPGDNVTFQCHPGFVLRGSRGAKCQPDSHWVPAVPTCQPVRLCPAPPVIAHATLSAEPGMNFTSGTSVSYSCQPGFSLLGHPSVLCTAWGNWSLPYPRCAAGCGTPTPLLFAELSQEYQNQTEFPVGVTVNYTCRPGFVQQPQISPTITCLENLTWSEAQEFCKMLQCPSPPNIEKGKHDSQDLEVFPTGM…
SIO_010081: CR2
subclass of: SO_0000673
so part of: CR2
location: complement(join(1178461..1178551,1180031..1180097,1180390..1180416,1180721..1180910,1180999..1181192,1181698..1181880,1182583..1182789,1183137..1183222,1183814..1183910,1184129..1184320,1185326..1185736,1187519..1187598,1187854..1187929,1188073..1188102,1188477..1188656,1188844..1189026,1189306..1189488,1190166..1190345,1191073..1191158,1191686..1191785,1192018..1192209,1192420..1192602,1193122..1193313,1194109..1194291,1194382..1194564,1194698..1194880,1195501..1195680,1196018..1196200,1196664..1196858,1197360..1197445,1197603..1197702,1197859..1198050,1198140..1198319,1198637..1198831,1199985..1200070,1200396..1200495,1200741..1200932,1201221..1201439,1201696..1201878,1202010..1202189,1202354..1202725,1203040..1203222,1203354..1203533,1203686..1203868,1204389..1204568,1205167..1205254,1208352..1208562,1209190..1209285,1209533..1209628,1209862..1210053,1210272..1210382,1210530..1210593,1210694..1210720,1210820..1210879,1211655..1211882,1212131..1212216,1212385..1212481,1212673..1212864,1213376..1213567,1214561..1214630))
location: region:1178461-1214630:-1
so has part: feature:1214561-1214630:-1:exon
so has part: feature:1213376-1213567:-1:exon
so has part: feature:1212673-1212864:-1:exon
so has part: feature:1212385-1212481:-1:exon
so has part: feature:1212131-1212216:-1:exon
so has part: feature:1211655-1211882:-1:exon
so has part: feature:1210820-1210879:-1:exon
so has part: feature:1210694-1210720:-1:exon
so has part: feature:1210530-1210593:-1:exon
so has part: feature:1210272-1210382:-1:exon
so has part: feature:1209862-1210053:-1:exon
so has part: feature:1209533-1209628:-1:exon
so has part: feature:1209190-1209285:-1:exon
so has part: feature:1208352-1208562:-1:exon
so has part: feature:1205167-1205254:-1:exon
so has part: feature:1204389-1204568:-1:exon
so has part: feature:1203686-1203868:-1:exon
so has part: feature:1203354-1203533:-1:exon
so has part: feature:1203040-1203222:-1:exon
so has part: feature:1202354-1202725:-1:exon
so has part: feature:1202010-1202189:-1:exon
so has part: feature:1201696-1201878:-1:exon
so has part: feature:1201221-1201439:-1:exon
so has part: feature:1200741-1200932:-1:exon
so has part: feature:1200396-1200495:-1:exon
so has part: feature:1199985-1200070:-1:exon
so has part: feature:1198637-1198831:-1:exon
so has part: feature:1198140-1198319:-1:exon
so has part: feature:1197859-1198050:-1:exon
so has part: feature:1197603-1197702:-1:exon
so has part: feature:1197360-1197445:-1:exon
so has part: feature:1196664-1196858:-1:exon
so has part: feature:1196018-1196200:-1:exon
so has part: feature:1195501-1195680:-1:exon
so has part: feature:1194698-1194880:-1:exon
so has part: feature:1194382-1194564:-1:exon
so has part: feature:1194109-1194291:-1:exon
so has part: feature:1193122-1193313:-1:exon
so has part: feature:1192420-1192602:-1:exon
so has part: feature:1192018-1192209:-1:exon
so has part: feature:1191686-1191785:-1:exon
so has part: feature:1191073-1191158:-1:exon
so has part: feature:1190166-1190345:-1:exon
so has part: feature:1189306-1189488:-1:exon
so has part: feature:1188844-1189026:-1:exon
so has part: feature:1188477-1188656:-1:exon
so has part: feature:1188073-1188102:-1:exon
so has part: feature:1187854-1187929:-1:exon
so has part: feature:1187519-1187598:-1:exon
so has part: feature:1185326-1185736:-1:exon
so has part: feature:1184129-1184320:-1:exon
so has part: feature:1183814-1183910:-1:exon
so has part: feature:1183137-1183222:-1:exon
so has part: feature:1182583-1182789:-1:exon
so has part: feature:1181698-1181880:-1:exon
so has part: feature:1180999-1181192:-1:exon
so has part: feature:1180721-1180910:-1:exon
so has part: feature:1180390-1180416:-1:exon
so has part: feature:1180031-1180097:-1:exon
so has part: feature:1178461-1178551:-1:exon

XP_041577132.1
type: Protein
SIO_000068: ncbiprotein

position:1178461:-1
position: 1178461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1214630:-1
position: 1214630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1214561-1214630:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1213376-1213567:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1212673-1212864:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1212385-1212481:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1212131-1212216:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1211655-1211882:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1210820-1210879:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1210694-1210720:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1210530-1210593:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1210272-1210382:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1209862-1210053:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1209533-1209628:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1209190-1209285:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1208352-1208562:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1205167-1205254:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1204389-1204568:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1203686-1203868:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1203354-1203533:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1203040-1203222:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1202354-1202725:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1202010-1202189:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1201696-1201878:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1201221-1201439:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1200741-1200932:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1200396-1200495:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1199985-1200070:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1198637-1198831:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1198140-1198319:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1197859-1198050:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1197603-1197702:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1197360-1197445:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1196664-1196858:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1196018-1196200:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1195501-1195680:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1194698-1194880:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1194382-1194564:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1194109-1194291:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1193122-1193313:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1192420-1192602:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1192018-1192209:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:1191686-1191785:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:1191073-1191158:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:1190166-1190345:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:1189306-1189488:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:1188844-1189026:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:1188477-1188656:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:1188073-1188102:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:1187854-1187929:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:1187519-1187598:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:1185326-1185736:-1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:1184129-1184320:-1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:1183814-1183910:-1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:1183137-1183222:-1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:1182583-1182789:-1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:1181698-1181880:-1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:1180999-1181192:-1:exon

urn:…
SIO_000300: 57
SIO_000628: feature:1180721-1180910:-1:exon

urn:…
SIO_000300: 58
SIO_000628: feature:1180390-1180416:-1:exon

urn:…
SIO_000300: 59
SIO_000628: feature:1180031-1180097:-1:exon

urn:…
SIO_000300: 60
SIO_000628: feature:1178461-1178551:-1:exon

HIPK1
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: HIPK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1224310..1248947)
location: region:1224310-1248947:-1
so has part: feature:1224310-1248947:-1:exon
subclass of: SO_0000010

100229690
type: Gene
SIO_000068: ncbigene

position:1224310:-1
position: 1224310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1248947:-1
position: 1248947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1224310-1248947:-1:exon

HIPK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: HIPK1
product: homeodomain interacting protein kinase 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 ESTs, 6 long SRA reads, 2 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XM_030291743.3
SIO_010081: HIPK1
subclass of: SO_0000673
so part of: HIPK1
location: complement(join(1224310..1228852,1229741..1229877,1230225..1230463,1230726..1230941,1231455..1231637,1231790..1231932,1236066..1236187,1237030..1237252,1237607..1237769,1238048..1238232,1239067..1239153,1239890..1240009,1241986..1242109,1246670..1247747,1248677..1248947))
location: region:1224310-1248947:-1
so has part: feature:1248677-1248947:-1:exon
so has part: feature:1246670-1247747:-1:exon
so has part: feature:1241986-1242109:-1:exon
so has part: feature:1239890-1240009:-1:exon
so has part: feature:1239067-1239153:-1:exon
so has part: feature:1238048-1238232:-1:exon
so has part: feature:1237607-1237769:-1:exon
so has part: feature:1237030-1237252:-1:exon
so has part: feature:1236066-1236187:-1:exon
so has part: feature:1231790-1231932:-1:exon
so has part: feature:1231455-1231637:-1:exon
so has part: feature:1230726-1230941:-1:exon
so has part: feature:1230225-1230463:-1:exon
so has part: feature:1229741-1229877:-1:exon
so has part: feature:1224310-1228852:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1248677-1248947:-1:exon

position:1248677:-1
position: 1248677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1246670-1247747:-1:exon

position:1246670:-1
position: 1246670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1247747:-1
position: 1247747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1241986-1242109:-1:exon

position:1241986:-1
position: 1241986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1242109:-1
position: 1242109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1239890-1240009:-1:exon

position:1239890:-1
position: 1239890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1240009:-1
position: 1240009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1239067-1239153:-1:exon

position:1239067:-1
position: 1239067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1239153:-1
position: 1239153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1238048-1238232:-1:exon

position:1238048:-1
position: 1238048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1238232:-1
position: 1238232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1237607-1237769:-1:exon

position:1237607:-1
position: 1237607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1237769:-1
position: 1237769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1237030-1237252:-1:exon

position:1237030:-1
position: 1237030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1237252:-1
position: 1237252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1236066-1236187:-1:exon

position:1236066:-1
position: 1236066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1236187:-1
position: 1236187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1231790-1231932:-1:exon

position:1231790:-1
position: 1231790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1231932:-1
position: 1231932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1231455-1231637:-1:exon

position:1231455:-1
position: 1231455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1231637:-1
position: 1231637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1230726-1230941:-1:exon

position:1230726:-1
position: 1230726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1230941:-1
position: 1230941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1230225-1230463:-1:exon

position:1230225:-1
position: 1230225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1230463:-1
position: 1230463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1229741-1229877:-1:exon

position:1229741:-1
position: 1229741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1229877:-1
position: 1229877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1224310-1228852:-1:exon

position:1228852:-1
position: 1228852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HIPK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: HIPK1
product: homeodomain interacting protein kinase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 ESTs, 7 long SRA reads, 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 65 samples with support for all annotated introns
transcript id: XM_030291742.3
SIO_010081: HIPK1
subclass of: SO_0000673
so part of: HIPK1
location: complement(join(1224310..1228852,1229741..1229877,1230225..1230463,1230726..1230941,1231455..1231637,1231790..1231929,1234394..1234528,1236066..1236187,1237030..1237252,1237607..1237769,1238048..1238232,1239067..1239153,1239890..1240009,1241986..1242109,1246670..1247747,1248677..1248947))
location: region:1224310-1248947:-1
so has part: feature:1248677-1248947:-1:exon
so has part: feature:1246670-1247747:-1:exon
so has part: feature:1241986-1242109:-1:exon
so has part: feature:1239890-1240009:-1:exon
so has part: feature:1239067-1239153:-1:exon
so has part: feature:1238048-1238232:-1:exon
so has part: feature:1237607-1237769:-1:exon
so has part: feature:1237030-1237252:-1:exon
so has part: feature:1236066-1236187:-1:exon
so has part: feature:1234394-1234528:-1:exon
so has part: feature:1231790-1231929:-1:exon
so has part: feature:1231455-1231637:-1:exon
so has part: feature:1230726-1230941:-1:exon
so has part: feature:1230225-1230463:-1:exon
so has part: feature:1229741-1229877:-1:exon
so has part: feature:1224310-1228852:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1248677-1248947:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1246670-1247747:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1241986-1242109:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1239890-1240009:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1239067-1239153:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1238048-1238232:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1237607-1237769:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1237030-1237252:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1236066-1236187:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1234394-1234528:-1:exon

position:1234394:-1
position: 1234394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1234528:-1
position: 1234528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1231790-1231929:-1:exon

position:1231929:-1
position: 1231929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1231455-1231637:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1230726-1230941:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1230225-1230463:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1229741-1229877:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1224310-1228852:-1:exon

HIPK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: HIPK1
product: homeodomain interacting protein kinase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 ESTs, 7 long SRA reads, 3 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 76 samples with support for all annotated introns
transcript id: XM_030291741.3
SIO_010081: HIPK1
subclass of: SO_0000673
so part of: HIPK1
location: complement(join(1224310..1228852,1229741..1229877,1230225..1230463,1230726..1230941,1231455..1231637,1231790..1231932,1234394..1234528,1236066..1236187,1237030..1237252,1237607..1237769,1238048..1238232,1239067..1239153,1239890..1240009,1241986..1242109,1246670..1247747,1248677..1248947))
location: region:1224310-1248947:-1
so has part: feature:1248677-1248947:-1:exon
so has part: feature:1246670-1247747:-1:exon
so has part: feature:1241986-1242109:-1:exon
so has part: feature:1239890-1240009:-1:exon
so has part: feature:1239067-1239153:-1:exon
so has part: feature:1238048-1238232:-1:exon
so has part: feature:1237607-1237769:-1:exon
so has part: feature:1237030-1237252:-1:exon
so has part: feature:1236066-1236187:-1:exon
so has part: feature:1234394-1234528:-1:exon
so has part: feature:1231790-1231932:-1:exon
so has part: feature:1231455-1231637:-1:exon
so has part: feature:1230726-1230941:-1:exon
so has part: feature:1230225-1230463:-1:exon
so has part: feature:1229741-1229877:-1:exon
so has part: feature:1224310-1228852:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1248677-1248947:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1246670-1247747:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1241986-1242109:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1239890-1240009:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1239067-1239153:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1238048-1238232:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1237607-1237769:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1237030-1237252:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1236066-1236187:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1234394-1234528:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1231790-1231932:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1231455-1231637:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1230726-1230941:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1230225-1230463:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1229741-1229877:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1224310-1228852:-1:exon

HIPK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: HIPK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeodomain-interacting protein kinase 1 isoform X3
translation: MASQLQVFSPPSVSSSAFCSAKKLKVEPSVWDVSGQSSSDKYYTHSKNLPAAQGQASSSHQVANFSIPAYDQNLLLPAPSVEHIVVTAADSTGSSATASFQSSQTITHRSNVSLLEPYQKCGLKRKSEEVDSNGSVQIIEEHPPLMLQNRPAVGAAATTTTVTTKSSSSSGEGDYQLVQHEILCSMTNSYEVLEFLGRGTFGQVAKCWKRSTKEIVAIKILKNHPSYARQGQIEVSILSRLSSENADEYNFVRSYECFQHKNHTCLVFEMLEQNLYDFLKQNKFSPLPLKYIRPILQQVATALMKLKSLGLIHADLKPENIMLVDPARQPYRVKVIDFGSASHVSKAVCSTYLQSRYYRAPEIILGLPFCEAIDMWSLGCVIAELFLGWPLYPGASEYDQIRYISQTQGLPAEYLLSAGTKTSRFFNRDPNLGYPLWRLKTPEEHELETGIKSKEARKYIFNCLDDMAQVNMSTDLEGTDMLAEKADRREYIDLLKKMLTIDADKRITPLKTLNHSFVTMAHLLDFPHSNHVKSCFQNMEICKRRVNMYDTVNQIKSPFTTHVAPNTSTNLTMSFNNQLNTVHNQASVLASNSTAAATLSLANSDVSLLNYQSALYPSSAAPVAGVAQQSVSLQPGTTQICTQTDPFQQTFIVCPPAFQTGLQATTKHSGFPVRMENAVPIVPQAPAAQPLQIQSGVLTQQAWPGGTQQILLPSTWQQLPGVALHNSVQPAAVIPETIGSSQQLADWRNAHSHGNQYSTLMQQPSLLTNHVTLATAQPLNVGVAHVVRQQQSSNVPAKKNKQPAPSTAKPSSSLEPVPTQVYSLIGSSPLRSTSSSSNVLVPVQEQHQPIVIPDTPSPPVSVITIRSDTDEEEDSKYKPASLGMKQRSNVISYVTVNDSPDSDSSLSSPYAPDPLSSLRSTGGALELPSRAAADSSSSRTIIVPPLKMQLNDCIVATQASGILSSSSKSKPVASVSGQSSGCCITPTGYRSHRVVTNGVQPLNLSQNQQTTVLASQERNGNAVPRRQQAYVAPLTSTISQAPYTFQHSSPVHPHLAAATASAHLPSQPHMYTYAPSTAATLGSTTSIAHLFSPQGSSRHTTYAAHPSTLVHQVPVSVGPSLLTSANVPPAQYQHQFAPQSYIGASRGSAIYTGYPLSPTKINQYSYL
SIO_010081: HIPK1
subclass of: SO_0000673
so part of: HIPK1
location: complement(join(1228367..1228852,1229741..1229877,1230225..1230463,1230726..1230941,1231455..1231637,1231790..1231932,1236066..1236187,1237030..1237252,1237607..1237769,1238048..1238232,1239067..1239153,1239890..1240009,1241986..1242109,1246670..1247745))
location: region:1228367-1247745:-1
so has part: feature:1246670-1247745:-1:exon
so has part: feature:1241986-1242109:-1:exon
so has part: feature:1239890-1240009:-1:exon
so has part: feature:1239067-1239153:-1:exon
so has part: feature:1238048-1238232:-1:exon
so has part: feature:1237607-1237769:-1:exon
so has part: feature:1237030-1237252:-1:exon
so has part: feature:1236066-1236187:-1:exon
so has part: feature:1231790-1231932:-1:exon
so has part: feature:1231455-1231637:-1:exon
so has part: feature:1230726-1230941:-1:exon
so has part: feature:1230225-1230463:-1:exon
so has part: feature:1229741-1229877:-1:exon
so has part: feature:1228367-1228852:-1:exon

XP_030147603.3
type: Protein
SIO_000068: ncbiprotein

position:1228367:-1
position: 1228367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1247745:-1
position: 1247745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1246670-1247745:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1241986-1242109:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1239890-1240009:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1239067-1239153:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1238048-1238232:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1237607-1237769:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1237030-1237252:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1236066-1236187:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1231790-1231932:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1231455-1231637:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1230726-1230941:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1230225-1230463:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1229741-1229877:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1228367-1228852:-1:exon

HIPK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: HIPK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeodomain-interacting protein kinase 1 isoform X2
translation: MASQLQVFSPPSVSSSAFCSAKKLKVEPSVWDVSGQSSSDKYYTHSKNLPAAQGQASSSHQVANFSIPAYDQNLLLPAPSVEHIVVTAADSTGSSATASFQSSQTITHRSNVSLLEPYQKCGLKRKSEEVDSNGSVQIIEEHPPLMLQNRPAVGAAATTTTVTTKSSSSSGEGDYQLVQHEILCSMTNSYEVLEFLGRGTFGQVAKCWKRSTKEIVAIKILKNHPSYARQGQIEVSILSRLSSENADEYNFVRSYECFQHKNHTCLVFEMLEQNLYDFLKQNKFSPLPLKYIRPILQQVATALMKLKSLGLIHADLKPENIMLVDPARQPYRVKVIDFGSASHVSKAVCSTYLQSRYYRAPEIILGLPFCEAIDMWSLGCVIAELFLGWPLYPGASEYDQIRYISQTQGLPAEYLLSAGTKTSRFFNRDPNLGYPLWRLKTPEEHELETGIKSKEARKYIFNCLDDMAQVNMSTDLEGTDMLAEKADRREYIDLLKKMLTIDADKRITPLKTLNHSFVTMAHLLDFPHSNHVKSCFQNMEICKRRVNMYDTVNQIKSPFTTHVAPNTSTNLTMSFNNQLNTVHNQASVLASNSTAAATLSLANSDVSLLNYQSALYPSSAAPVAGVAQQSVSLQPGTTQICTQTDPFQQTFIVCPPAFQTGLQATTKHSGFPVRMENAVPIVPQAPAAQPLQIQSGVLTQGSCTPLMVATLHPQVATITPQYAVPFTLNCAAGRPALVEQTAAVLAWPGGTQQILLPSTWQQLPGVALHNSVQPAAVIPETIGSSQQLADWRNAHSHGNQYSTLMQQPSLLTNHVTLATAQPLNVGVAHVVRQQQSSNVPAKKNKQPAPSTAKPSSSLEPVPTQVYSLIGSSPLRSTSSSSNVLVPVQEQHQPIVIPDTPSPPVSVITIRSDTDEEEDSKYKPASLGMKQRSNVISYVTVNDSPDSDSSLSSPYAPDPLSSLRSTGGALELPSRAAADSSSSRTIIVPPLKMQLNDCIVATQASGILSSSSKSKPVASVSGQSSGCCITPTGYRSHRVVTNGVQPLNLSQNQQTTVLASQERNGNAVPRRQQAYVAPLTSTISQAPYTFQHSSPVHPHLAAATASAHLPSQPHMYTYAPSTAATLGSTTSIAHLFSPQGSSRHTTYAAHPSTLVHQVPVSVGPSLLTSANVPPAQYQHQFAPQSYIGASRGSAIYTGYPLSPTKINQYSYL
SIO_010081: HIPK1
subclass of: SO_0000673
so part of: HIPK1
location: complement(join(1228367..1228852,1229741..1229877,1230225..1230463,1230726..1230941,1231455..1231637,1231790..1231929,1234394..1234528,1236066..1236187,1237030..1237252,1237607..1237769,1238048..1238232,1239067..1239153,1239890..1240009,1241986..1242109,1246670..1247745))
location: region:1228367-1247745:-1
so has part: feature:1246670-1247745:-1:exon
so has part: feature:1241986-1242109:-1:exon
so has part: feature:1239890-1240009:-1:exon
so has part: feature:1239067-1239153:-1:exon
so has part: feature:1238048-1238232:-1:exon
so has part: feature:1237607-1237769:-1:exon
so has part: feature:1237030-1237252:-1:exon
so has part: feature:1236066-1236187:-1:exon
so has part: feature:1234394-1234528:-1:exon
so has part: feature:1231790-1231929:-1:exon
so has part: feature:1231455-1231637:-1:exon
so has part: feature:1230726-1230941:-1:exon
so has part: feature:1230225-1230463:-1:exon
so has part: feature:1229741-1229877:-1:exon
so has part: feature:1228367-1228852:-1:exon

XP_030147602.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1246670-1247745:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1241986-1242109:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1239890-1240009:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1239067-1239153:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1238048-1238232:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1237607-1237769:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1237030-1237252:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1236066-1236187:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1234394-1234528:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1231790-1231929:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1231455-1231637:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1230726-1230941:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1230225-1230463:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1229741-1229877:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1228367-1228852:-1:exon

HIPK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: HIPK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeodomain-interacting protein kinase 1 isoform X1
translation: MASQLQVFSPPSVSSSAFCSAKKLKVEPSVWDVSGQSSSDKYYTHSKNLPAAQGQASSSHQVANFSIPAYDQNLLLPAPSVEHIVVTAADSTGSSATASFQSSQTITHRSNVSLLEPYQKCGLKRKSEEVDSNGSVQIIEEHPPLMLQNRPAVGAAATTTTVTTKSSSSSGEGDYQLVQHEILCSMTNSYEVLEFLGRGTFGQVAKCWKRSTKEIVAIKILKNHPSYARQGQIEVSILSRLSSENADEYNFVRSYECFQHKNHTCLVFEMLEQNLYDFLKQNKFSPLPLKYIRPILQQVATALMKLKSLGLIHADLKPENIMLVDPARQPYRVKVIDFGSASHVSKAVCSTYLQSRYYRAPEIILGLPFCEAIDMWSLGCVIAELFLGWPLYPGASEYDQIRYISQTQGLPAEYLLSAGTKTSRFFNRDPNLGYPLWRLKTPEEHELETGIKSKEARKYIFNCLDDMAQVNMSTDLEGTDMLAEKADRREYIDLLKKMLTIDADKRITPLKTLNHSFVTMAHLLDFPHSNHVKSCFQNMEICKRRVNMYDTVNQIKSPFTTHVAPNTSTNLTMSFNNQLNTVHNQASVLASNSTAAATLSLANSDVSLLNYQSALYPSSAAPVAGVAQQSVSLQPGTTQICTQTDPFQQTFIVCPPAFQTGLQATTKHSGFPVRMENAVPIVPQAPAAQPLQIQSGVLTQGSCTPLMVATLHPQVATITPQYAVPFTLNCAAGRPALVEQTAAVLQAWPGGTQQILLPSTWQQLPGVALHNSVQPAAVIPETIGSSQQLADWRNAHSHGNQYSTLMQQPSLLTNHVTLATAQPLNVGVAHVVRQQQSSNVPAKKNKQPAPSTAKPSSSLEPVPTQVYSLIGSSPLRSTSSSSNVLVPVQEQHQPIVIPDTPSPPVSVITIRSDTDEEEDSKYKPASLGMKQRSNVISYVTVNDSPDSDSSLSSPYAPDPLSSLRSTGGALELPSRAAADSSSSRTIIVPPLKMQLNDCIVATQASGILSSSSKSKPVASVSGQSSGCCITPTGYRSHRVVTNGVQPLNLSQNQQTTVLASQERNGNAVPRRQQAYVAPLTSTISQAPYTFQHSSPVHPHLAAATASAHLPSQPHMYTYAPSTAATLGSTTSIAHLFSPQGSSRHTTYAAHPSTLVHQVPVSVGPSLLTSANVPPAQYQHQFAPQSYIGASRGSAIYTGYPLSPTKINQYSYL
SIO_010081: HIPK1
subclass of: SO_0000673
so part of: HIPK1
location: complement(join(1228367..1228852,1229741..1229877,1230225..1230463,1230726..1230941,1231455..1231637,1231790..1231932,1234394..1234528,1236066..1236187,1237030..1237252,1237607..1237769,1238048..1238232,1239067..1239153,1239890..1240009,1241986..1242109,1246670..1247745))
location: region:1228367-1247745:-1
so has part: feature:1246670-1247745:-1:exon
so has part: feature:1241986-1242109:-1:exon
so has part: feature:1239890-1240009:-1:exon
so has part: feature:1239067-1239153:-1:exon
so has part: feature:1238048-1238232:-1:exon
so has part: feature:1237607-1237769:-1:exon
so has part: feature:1237030-1237252:-1:exon
so has part: feature:1236066-1236187:-1:exon
so has part: feature:1234394-1234528:-1:exon
so has part: feature:1231790-1231932:-1:exon
so has part: feature:1231455-1231637:-1:exon
so has part: feature:1230726-1230941:-1:exon
so has part: feature:1230225-1230463:-1:exon
so has part: feature:1229741-1229877:-1:exon
so has part: feature:1228367-1228852:-1:exon

XP_030147601.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1246670-1247745:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1241986-1242109:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1239890-1240009:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1239067-1239153:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1238048-1238232:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1237607-1237769:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1237030-1237252:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1236066-1236187:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1234394-1234528:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1231790-1231932:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1231455-1231637:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1230726-1230941:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1230225-1230463:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1229741-1229877:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1228367-1228852:-1:exon

DCLRE1B
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: DCLRE1B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1253878..1256771)
location: region:1253878-1256771:-1
so has part: feature:1253878-1256771:-1:exon
subclass of: SO_0000010

100221064
type: Gene
SIO_000068: ncbigene

position:1253878:-1
position: 1253878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1256771:-1
position: 1256771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1253878-1256771:-1:exon

DCLRE1B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: DCLRE1B
product: DNA cross-link repair 1B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_032753113.2
SIO_010081: DCLRE1B
subclass of: SO_0000673
so part of: DCLRE1B
location: complement(join(1253878..1254508,1254616..1255269,1255363..1255542,1256217..1256361,1256460..1256771))
location: region:1253878-1256771:-1
so has part: feature:1256460-1256771:-1:exon
so has part: feature:1256217-1256361:-1:exon
so has part: feature:1255363-1255542:-1:exon
so has part: feature:1254616-1255269:-1:exon
so has part: feature:1253878-1254508:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1256460-1256771:-1:exon

position:1256460:-1
position: 1256460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1256217-1256361:-1:exon

position:1256217:-1
position: 1256217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1256361:-1
position: 1256361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1255363-1255542:-1:exon

position:1255363:-1
position: 1255363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1255542:-1
position: 1255542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1254616-1255269:-1:exon

position:1254616:-1
position: 1254616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1255269:-1
position: 1255269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1253878-1254508:-1:exon

position:1254508:-1
position: 1254508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DCLRE1B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: DCLRE1B
product: DNA cross-link repair 1B, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 1 long SRA read, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 81 samples with support for all annotated introns
transcript id: XM_030291871.3
SIO_010081: DCLRE1B
subclass of: SO_0000673
so part of: DCLRE1B
location: complement(join(1253878..1255269,1255363..1255542,1256217..1256361,1256460..1256769))
location: region:1253878-1256769:-1
so has part: feature:1256460-1256769:-1:exon
so has part: feature:1256217-1256361:-1:exon
so has part: feature:1255363-1255542:-1:exon
so has part: feature:1253878-1255269:-1:exon

position:1256769:-1
position: 1256769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1256460-1256769:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1256217-1256361:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1255363-1255542:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1253878-1255269:-1:exon

DCLRE1B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: DCLRE1B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 5' exonuclease Apollo isoform X1
translation: MSGTVLAGTPIAVDFWSLRRAAGARLFFLSHMHSDHTVGLSSTWHRPLYCSPITARLLHHRLQVPMCWIRPLEVGQSHVVGEVTVTLIDSNHCPGSVMFLFEGTFGTILYTGDFRYTSAMQDEPALRGRHIDRLYLDNTHCQPQRALPSRALATRQAAHLIRAHPQHHVVIGVYSLGKETLLVDLALEFSTWVVVSPWRLEQMRLLGLPDVFTAEEGTGWIRAVDVAEICWDALVTWNAQHPTIAIIPTGRPVKVTHPNIHLIPYSDHSSFEELREFVKWLKPCSVIPIVKGEMCQDYFQEYLSSAPQVLPEFKVPKPVHESGQQQSQRRGQKPTSLWKRSPGSSVPRGVVYESPEKNTEKPGASTGVKVPQHCCEPGLCTKEGCTCHRGKREQLGRAGAAPVSGEHLATGFAEQYSLSPLNVLKEFSAQKFDQLVEDFLRKGDAP
SIO_010081: DCLRE1B
subclass of: SO_0000673
so part of: DCLRE1B
location: complement(join(1254443..1255269,1255363..1255542,1256217..1256361,1256460..1256648))
location: region:1254443-1256648:-1
so has part: feature:1256460-1256648:-1:exon
so has part: feature:1256217-1256361:-1:exon
so has part: feature:1255363-1255542:-1:exon
so has part: feature:1254443-1255269:-1:exon

XP_030147731.3
type: Protein
SIO_000068: ncbiprotein

position:1254443:-1
position: 1254443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1256648:-1
position: 1256648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1256460-1256648:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1256217-1256361:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1255363-1255542:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1254443-1255269:-1:exon

DCLRE1B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: DCLRE1B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 5' exonuclease Apollo isoform X2
translation: MSGTVLAGTPIAVDFWSLRRAAGARLFFLSHMHSDHTVGLSSTWHRPLYCSPITARLLHHRLQVPMCWIRPLEVGQSHVVGEVTVTLIDSNHCPGSVMFLFEGTFGTILYTGDFRYTSAMQDEPALRGRHIDRLYLDNTHCQPQRALPSRALATRQAAHLIRAHPQHHVVIGVYSLGKETLLVDLALEFSTWVVVSPWRLEQMRLLGLPDVFTAEEGTGWIRAVDVAEICWDALVTWNAQHPTIAIIPTGRPVKVTHPNIHLIPYSDHSSFEELREFVKWLKPCSVIPIVKGEMCQDYFQEYLSSAPQVLPEFKVPKPVHESGQQQSQRRGQKPTSLWKRSPGSSVPRGVVYESPEKNTEKPGASTGVKVPQHCCEPGLCTKEGCTCHRGVFCTEV
SIO_010081: DCLRE1B
subclass of: SO_0000673
so part of: DCLRE1B
location: complement(join(1254486..1254508,1254616..1255269,1255363..1255542,1256217..1256361,1256460..1256648))
location: region:1254486-1256648:-1
so has part: feature:1256460-1256648:-1:exon
so has part: feature:1256217-1256361:-1:exon
so has part: feature:1255363-1255542:-1:exon
so has part: feature:1254616-1255269:-1:exon
so has part: feature:1254486-1254508:-1:exon

XP_032609004.2
type: Protein
SIO_000068: ncbiprotein

position:1254486:-1
position: 1254486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1256460-1256648:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1256217-1256361:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1255363-1255542:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1254616-1255269:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1254486-1254508:-1:exon

AP4B1
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: AP4B1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1256863..1263547
location: region:1256863-1263547:1
so has part: feature:1256863-1263547:1:exon
subclass of: SO_0000010

100218221
type: Gene
SIO_000068: ncbigene

position:1256863:1
position: 1256863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1263547:1
position: 1263547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1256863-1263547:1:exon

AP4B1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: AP4B1
product: adaptor related protein complex 4 subunit beta 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 1 long SRA read, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 100 samples with support for all annotated introns
transcript id: XM_004176661.5
SIO_010081: AP4B1
subclass of: SO_0000673
so part of: AP4B1
location: join(1256863..1257323,1257404..1257628,1257703..1257833,1258052..1258199,1258346..1258842,1259513..1259596,1260505..1260608,1260766..1260973,1261488..1261772,1262186..1263547)
location: region:1256863-1263547:1
so has part: feature:1256863-1257323:1:exon
so has part: feature:1257404-1257628:1:exon
so has part: feature:1257703-1257833:1:exon
so has part: feature:1258052-1258199:1:exon
so has part: feature:1258346-1258842:1:exon
so has part: feature:1259513-1259596:1:exon
so has part: feature:1260505-1260608:1:exon
so has part: feature:1260766-1260973:1:exon
so has part: feature:1261488-1261772:1:exon
so has part: feature:1262186-1263547:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1256863-1257323:1:exon

position:1257323:1
position: 1257323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1257404-1257628:1:exon

position:1257404:1
position: 1257404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1257628:1
position: 1257628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1257703-1257833:1:exon

position:1257703:1
position: 1257703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1257833:1
position: 1257833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1258052-1258199:1:exon

position:1258052:1
position: 1258052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1258199:1
position: 1258199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1258346-1258842:1:exon

position:1258346:1
position: 1258346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1258842:1
position: 1258842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1259513-1259596:1:exon

position:1259513:1
position: 1259513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1259596:1
position: 1259596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1260505-1260608:1:exon

position:1260505:1
position: 1260505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1260608:1
position: 1260608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1260766-1260973:1:exon

position:1260766:1
position: 1260766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1260973:1
position: 1260973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1261488-1261772:1:exon

position:1261488:1
position: 1261488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1261772:1
position: 1261772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1262186-1263547:1:exon

position:1262186:1
position: 1262186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

AP4B1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: AP4B1
product: adaptor related protein complex 4 subunit beta 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
transcript id: XM_030291870.3
SIO_010081: AP4B1
subclass of: SO_0000673
so part of: AP4B1
location: join(1256864..1257323,1257703..1257833,1258052..1258199,1258346..1258842,1259513..1259596,1260505..1260608,1260766..1260973,1261488..1261772,1262186..1263547)
location: region:1256864-1263547:1
so has part: feature:1256864-1257323:1:exon
so has part: feature:1257703-1257833:1:exon
so has part: feature:1258052-1258199:1:exon
so has part: feature:1258346-1258842:1:exon
so has part: feature:1259513-1259596:1:exon
so has part: feature:1260505-1260608:1:exon
so has part: feature:1260766-1260973:1:exon
so has part: feature:1261488-1261772:1:exon
so has part: feature:1262186-1263547:1:exon

position:1256864:1
position: 1256864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1256864-1257323:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1257703-1257833:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1258052-1258199:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1258346-1258842:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1259513-1259596:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1260505-1260608:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1260766-1260973:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1261488-1261772:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1262186-1263547:1:exon

AP4B1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: AP4B1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AP-4 complex subunit beta-1 isoform X1
translation: MPYLGGEEAQRELRRALSNPHVQADPARYRGAVLRVIRLMSQGADVSGLFPEMVKAGAVADVVQKKLVSFYVRAQAPRQPQLALLAVNSLRKDCAHPSPAVRGLALRTMCGLRMPGIQEYLQQPLVNGLRDKASYVRRVAVLGCAKMVKLQGDCEVDGALVNELYSLLRDQDPIVVVNCLRALEEILKKEGGVVINKPIAHHLLNRMPDLDQWGQSEVLTFLLRYKPRSEDELFDILNLLDGYLKSSSPSVVMAATKLFLVLAREYPDVQADVLVRVKGPLLSACTSESRELCFTALCHVRQILRSLPGHFSSHYKKFFCSYSEPHYIKCQKMEVLCELVNDENVQQVLEELKGYCTDVSEELAQGAIFAIANIARTYTEQCVGILTELLGLQQEHITSAVVRAFRDLAWLCPQCTDAVCQALPGCEDTIQDSEGKQALIWLLGTHGEKIPNAPYVLEDFVESVKSESFPAVKMELLTALLRLFLARPAECQDMLGRLLYYCIEEEQDMAVRDRGLFYYRLLQSGVEEVRRVLCSPKSDPSMGLLGDQSKQPVNAWASEFNTLATIYGRERWALATAQQPVEPSHSCPPCADSSSRDTESLVSEGNKEVPEVHPDTPMSEGNKELLKAHPDAGSLSLIPDVSLTAEQFEKTWLSLDTCCQLSLPWCGPVHADTIQTALRVVHIQTIAMSKAGAQPWKAYLSAQDDSGCLFLTELLLEAADSELQVSVKQNEAKPEALQSFISALRTVLEAVAGLES
SIO_010081: AP4B1
subclass of: SO_0000673
so part of: AP4B1
location: join(1257211..1257323,1257404..1257628,1257703..1257833,1258052..1258199,1258346..1258842,1259513..1259596,1260505..1260608,1260766..1260973,1261488..1261772,1262186..1262661)
location: region:1257211-1262661:1
so has part: feature:1257211-1257323:1:exon
so has part: feature:1257404-1257628:1:exon
so has part: feature:1257703-1257833:1:exon
so has part: feature:1258052-1258199:1:exon
so has part: feature:1258346-1258842:1:exon
so has part: feature:1259513-1259596:1:exon
so has part: feature:1260505-1260608:1:exon
so has part: feature:1260766-1260973:1:exon
so has part: feature:1261488-1261772:1:exon
so has part: feature:1262186-1262661:1:exon

XP_004176709.4
type: Protein
SIO_000068: ncbiprotein

position:1257211:1
position: 1257211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1262661:1
position: 1262661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1257211-1257323:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1257404-1257628:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1257703-1257833:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1258052-1258199:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1258346-1258842:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1259513-1259596:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1260505-1260608:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1260766-1260973:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1261488-1261772:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1262186-1262661:1:exon

AP4B1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: AP4B1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AP-4 complex subunit beta-1 isoform X2
translation: MPYLGGEEAQRELRRALSNPHVQADPARYRGAVLRVIRMPGIQEYLQQPLVNGLRDKASYVRRVAVLGCAKMVKLQGDCEVDGALVNELYSLLRDQDPIVVVNCLRALEEILKKEGGVVINKPIAHHLLNRMPDLDQWGQSEVLTFLLRYKPRSEDELFDILNLLDGYLKSSSPSVVMAATKLFLVLAREYPDVQADVLVRVKGPLLSACTSESRELCFTALCHVRQILRSLPGHFSSHYKKFFCSYSEPHYIKCQKMEVLCELVNDENVQQVLEELKGYCTDVSEELAQGAIFAIANIARTYTEQCVGILTELLGLQQEHITSAVVRAFRDLAWLCPQCTDAVCQALPGCEDTIQDSEGKQALIWLLGTHGEKIPNAPYVLEDFVESVKSESFPAVKMELLTALLRLFLARPAECQDMLGRLLYYCIEEEQDMAVRDRGLFYYRLLQSGVEEVRRVLCSPKSDPSMGLLGDQSKQPVNAWASEFNTLATIYGRERWALATAQQPVEPSHSCPPCADSSSRDTESLVSEGNKEVPEVHPDTPMSEGNKELLKAHPDAGSLSLIPDVSLTAEQFEKTWLSLDTCCQLSLPWCGPVHADTIQTALRVVHIQTIAMSKAGAQPWKAYLSAQDDSGCLFLTELLLEAADSELQVSVKQNEAKPEALQSFISALRTVLEAVAGLES
SIO_010081: AP4B1
subclass of: SO_0000673
so part of: AP4B1
location: join(1257211..1257323,1257703..1257833,1258052..1258199,1258346..1258842,1259513..1259596,1260505..1260608,1260766..1260973,1261488..1261772,1262186..1262661)
location: region:1257211-1262661:1
so has part: feature:1257211-1257323:1:exon
so has part: feature:1257703-1257833:1:exon
so has part: feature:1258052-1258199:1:exon
so has part: feature:1258346-1258842:1:exon
so has part: feature:1259513-1259596:1:exon
so has part: feature:1260505-1260608:1:exon
so has part: feature:1260766-1260973:1:exon
so has part: feature:1261488-1261772:1:exon
so has part: feature:1262186-1262661:1:exon

XP_030147730.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1257211-1257323:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1257703-1257833:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1258052-1258199:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1258346-1258842:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1259513-1259596:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1260505-1260608:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1260766-1260973:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1261488-1261772:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1262186-1262661:1:exon

PTPN22
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: PTPN22
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1264048..1280333
location: region:1264048-1280333:1
so has part: feature:1264048-1280333:1:exon
subclass of: SO_0000010

100218217
type: Gene
SIO_000068: ncbigene

position:1264048:1
position: 1264048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1280333:1
position: 1280333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1264048-1280333:1:exon

PTPN22
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: PTPN22
product: protein tyrosine phosphatase non-receptor type 22
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_030292068.3
SIO_010081: PTPN22
subclass of: SO_0000673
so part of: PTPN22
location: join(1264048..1264552,1267424..1267532,1268488..1268564,1269490..1269585,1269934..1269972,1270376..1270447,1270525..1270584,1270970..1271112,1271849..1271915,1272876..1272953,1273463..1273555,1274857..1274933,1275853..1276586,1276918..1277007,1277153..1277283,1277944..1277971,1278354..1278434,1278728..1278831,1279254..1279284,1279384..1279455,1279759..1280333)
location: region:1264048-1280333:1
so has part: feature:1264048-1264552:1:exon
so has part: feature:1267424-1267532:1:exon
so has part: feature:1268488-1268564:1:exon
so has part: feature:1269490-1269585:1:exon
so has part: feature:1269934-1269972:1:exon
so has part: feature:1270376-1270447:1:exon
so has part: feature:1270525-1270584:1:exon
so has part: feature:1270970-1271112:1:exon
so has part: feature:1271849-1271915:1:exon
so has part: feature:1272876-1272953:1:exon
so has part: feature:1273463-1273555:1:exon
so has part: feature:1274857-1274933:1:exon
so has part: feature:1275853-1276586:1:exon
so has part: feature:1276918-1277007:1:exon
so has part: feature:1277153-1277283:1:exon
so has part: feature:1277944-1277971:1:exon
so has part: feature:1278354-1278434:1:exon
so has part: feature:1278728-1278831:1:exon
so has part: feature:1279254-1279284:1:exon
so has part: feature:1279384-1279455:1:exon
so has part: feature:1279759-1280333:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1264048-1264552:1:exon

position:1264552:1
position: 1264552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1267424-1267532:1:exon

position:1267424:1
position: 1267424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1267532:1
position: 1267532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1268488-1268564:1:exon

position:1268488:1
position: 1268488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1268564:1
position: 1268564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1269490-1269585:1:exon

position:1269490:1
position: 1269490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1269585:1
position: 1269585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1269934-1269972:1:exon

position:1269934:1
position: 1269934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1269972:1
position: 1269972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1270376-1270447:1:exon

position:1270376:1
position: 1270376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1270447:1
position: 1270447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1270525-1270584:1:exon

position:1270525:1
position: 1270525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1270584:1
position: 1270584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1270970-1271112:1:exon

position:1270970:1
position: 1270970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1271112:1
position: 1271112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1271849-1271915:1:exon

position:1271849:1
position: 1271849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1271915:1
position: 1271915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1272876-1272953:1:exon

position:1272876:1
position: 1272876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1272953:1
position: 1272953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1273463-1273555:1:exon

position:1273463:1
position: 1273463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1273555:1
position: 1273555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1274857-1274933:1:exon

position:1274857:1
position: 1274857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1274933:1
position: 1274933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1275853-1276586:1:exon

position:1275853:1
position: 1275853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1276586:1
position: 1276586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1276918-1277007:1:exon

position:1276918:1
position: 1276918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1277007:1
position: 1277007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1277153-1277283:1:exon

position:1277153:1
position: 1277153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1277283:1
position: 1277283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1277944-1277971:1:exon

position:1277944:1
position: 1277944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1277971:1
position: 1277971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1278354-1278434:1:exon

position:1278354:1
position: 1278354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1278434:1
position: 1278434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1278728-1278831:1:exon

position:1278728:1
position: 1278728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1278831:1
position: 1278831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1279254-1279284:1:exon

position:1279254:1
position: 1279254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1279284:1
position: 1279284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1279384-1279455:1:exon

position:1279384:1
position: 1279384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1279455:1
position: 1279455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1279759-1280333:1:exon

position:1279759:1
position: 1279759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PTPN22
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: PTPN22
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tyrosine-protein phosphatase non-receptor type 22
translation: MKSENHRQLSPAAPSAADHLTCPFPGGPGQARCGTMDQREILLQNLERAQGKKLSRGEFAEEFLKLKRQSTKYRADKIYPTAASEQPENVKKNRYKDILPFDHSRVELSLITSDTDSHYINANFIKGVYGPRAYIATQGPLSTTVTDFWRMIWEYEVLVVVMACMEFEMGKKKCERYWAEVDSSPLHCGPFSITCEAEEKRNEYVIRTLKVTLNEATRTIYHFHYKNWPDHHVPSSIQPILELVRDIRCYQPDDRVPVCIHCSAGCGRTGVICAIDYTQKLLKDGIVPMNFSVFSLIQEMRTQRPCIVQTKEQYELVYDAVIELFKRQIQALDGEKDSAASQEGAGHPVVKPVPTPVEDIYGLSLLTCSEREEQAAHQHLPPQEDKHRHLSPVAQSKASLPPLGALGAQPSSARGMPPIRQAISFGALNFSSCRQAAAGEPWGAGDAPQKRCSWELELEPDPKGAGRRAPGARAPLAWTVSTPLALEQRRQGWEWDAGDAKPVWSPQCPKAGHSRFQDGFSPVDLNPSRRAAGGPPGHRKQRQCPHPSLCSAEDPYFSSLSPDDPVSPVFPFLEGQDELLPTCSASAPPEPTTASSPSSHHVPLNQERIISSAPLPQRDDDDDDAPPLPQRTPESFIVASEPGQFPQATPDFQIPDRNPNIGTSWEWSGESHSKGFHDPVSLRPCKSVKLWSPRTETTQDCSNSPPPLPERTPESFVLAEAASLQPAARSSLSLVGLENKGSGTSSKELVKCFKRSKSLKILKNVKKSICSPLTKSTESAPTNSPRSFLNFGFANRFLKPKGPRNPPPAWNI
SIO_010081: PTPN22
subclass of: SO_0000673
so part of: PTPN22
location: join(1264361..1264552,1267424..1267532,1268488..1268564,1269490..1269585,1269934..1269972,1270376..1270447,1270525..1270584,1270970..1271112,1271849..1271915,1272876..1272953,1273463..1273555,1274857..1274933,1275853..1276586,1276918..1277007,1277153..1277283,1277944..1277971,1278354..1278434,1278728..1278831,1279254..1279284,1279384..1279455,1279759..1279823)
location: region:1264361-1279823:1
so has part: feature:1264361-1264552:1:exon
so has part: feature:1267424-1267532:1:exon
so has part: feature:1268488-1268564:1:exon
so has part: feature:1269490-1269585:1:exon
so has part: feature:1269934-1269972:1:exon
so has part: feature:1270376-1270447:1:exon
so has part: feature:1270525-1270584:1:exon
so has part: feature:1270970-1271112:1:exon
so has part: feature:1271849-1271915:1:exon
so has part: feature:1272876-1272953:1:exon
so has part: feature:1273463-1273555:1:exon
so has part: feature:1274857-1274933:1:exon
so has part: feature:1275853-1276586:1:exon
so has part: feature:1276918-1277007:1:exon
so has part: feature:1277153-1277283:1:exon
so has part: feature:1277944-1277971:1:exon
so has part: feature:1278354-1278434:1:exon
so has part: feature:1278728-1278831:1:exon
so has part: feature:1279254-1279284:1:exon
so has part: feature:1279384-1279455:1:exon
so has part: feature:1279759-1279823:1:exon

XP_030147928.3
type: Protein
SIO_000068: ncbiprotein

position:1264361:1
position: 1264361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1279823:1
position: 1279823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1264361-1264552:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1267424-1267532:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1268488-1268564:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1269490-1269585:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1269934-1269972:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1270376-1270447:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1270525-1270584:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1270970-1271112:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1271849-1271915:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1272876-1272953:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1273463-1273555:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1274857-1274933:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1275853-1276586:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1276918-1277007:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1277153-1277283:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1277944-1277971:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1278354-1278434:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1278728-1278831:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1279254-1279284:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1279384-1279455:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1279759-1279823:1:exon

RSBN1
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: RSBN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1281308..1299502
location: region:1281308-1299502:1
so has part: feature:1281308-1299502:1:exon
subclass of: SO_0000010

100230666
type: Gene
SIO_000068: ncbigene

position:1281308:1
position: 1281308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1299502:1
position: 1299502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1281308-1299502:1:exon

RSBN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: RSBN1
product: round spermatid basic protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 20 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 85 samples with support for all annotated introns
transcript id: XM_004176668.5
SIO_010081: RSBN1
subclass of: SO_0000673
so part of: RSBN1
location: join(1281308..1281699,1285216..1285886,1291522..1291659,1292072..1292214,1293063..1293230,1294323..1294431,1294985..1299502)
location: region:1281308-1299502:1
so has part: feature:1281308-1281699:1:exon
so has part: feature:1285216-1285886:1:exon
so has part: feature:1291522-1291659:1:exon
so has part: feature:1292072-1292214:1:exon
so has part: feature:1293063-1293230:1:exon
so has part: feature:1294323-1294431:1:exon
so has part: feature:1294985-1299502:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1281308-1281699:1:exon

position:1281699:1
position: 1281699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1285216-1285886:1:exon

position:1285216:1
position: 1285216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1285886:1
position: 1285886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1291522-1291659:1:exon

position:1291522:1
position: 1291522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1291659:1
position: 1291659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1292072-1292214:1:exon

position:1292072:1
position: 1292072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1292214:1
position: 1292214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1293063-1293230:1:exon

position:1293063:1
position: 1293063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1293230:1
position: 1293230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1294323-1294431:1:exon

position:1294323:1
position: 1294323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1294431:1
position: 1294431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1294985-1299502:1:exon

position:1294985:1
position: 1294985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RSBN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: RSBN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysine-specific demethylase 9
translation: MAAQVAAVPRAPEEPPPPSADRPARPRGPRRRRAAPGEPPAAKRARPSQALLAGPGPADPLPPPALPAAAAAGLFTFSPLSLPPPGERRHHHRHHAEPAGHKARRGSPADGAAGRPSQRETPDENGKSQRADSLIMKKIKKKKKKKHREDVRGKRLKMYNKEVQTVCAGLTRIDKETLSQGQCDSLEMSKESFRYLKDEQLCRLNLGMQEYRIPQGVQTPFVTHQEHSVRSSFLKTGTKFSNFIHEEHQSNGGALVLHAYMDELSFLSPVEMERFAEEFLALSFSENDKNAAYYALAIVHGAAAYLPDFLDYFAFNFPNTPVKMEILGKKDIETTTISNFHSQVNRTYCCGTYRAGPMRQISLVGAVDEEVGDYFPEFLDMLEESPFLRMTLPWGTLSSLRLQCRSQSDDGPIMWVRPGEQMIPTADMPKSPFKRRRSMNEIKNLQYLPRTSEPREVLFEDRTRAHADHVGQGFDWQSTAAVGVLKAVQFGEWSDQPRITKDVVCFHAEDFTDVVQRLQLDLHEPPVSQCVQWVDEAKLNQMRREGIRYARIQLCDNDIYFIPRNVIHQFKTVSAVCSLAWHIRLKQYHPVGETSPKAESNSSLNSDVPGNTEAEGEPQGVSVKIESEEPGIEIQLSSSVSSISGLVQPDQVAQPLPGFKIESDQQHNPQDHAGSSV
SIO_010081: RSBN1
subclass of: SO_0000673
so part of: RSBN1
location: join(1281342..1281699,1285216..1285886,1291522..1291659,1292072..1292214,1293063..1293230,1294323..1294431,1294985..1295431)
location: region:1281342-1295431:1
so has part: feature:1281342-1281699:1:exon
so has part: feature:1285216-1285886:1:exon
so has part: feature:1291522-1291659:1:exon
so has part: feature:1292072-1292214:1:exon
so has part: feature:1293063-1293230:1:exon
so has part: feature:1294323-1294431:1:exon
so has part: feature:1294985-1295431:1:exon

XP_004176716.2
type: Protein
SIO_000068: ncbiprotein

position:1281342:1
position: 1281342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1295431:1
position: 1295431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1281342-1281699:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1285216-1285886:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1291522-1291659:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1292072-1292214:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1293063-1293230:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1294323-1294431:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1294985-1295431:1:exon

PHTF1
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: PHTF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1299584..1311564
location: region:1299584-1311564:1
so has part: feature:1299584-1311564:1:exon
subclass of: SO_0000010

100227846
type: Gene
SIO_000068: ncbigene

position:1299584:1
position: 1299584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1311564:1
position: 1311564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition