Taeniopygia guttata isolate Blue55 chromosome 25, bTaeGut1.4.pri, whole genome shotgun sequence.
type: Entry
definition: Taeniopygia guttata isolate Blue55 chromosome 25, bTaeGut1.4.pri, whole genome shotgun sequence.
sequence version: NC_044237.2
sequence date: 2021-05-26
sequence: sequence
division: CON
label: NC_044237.2
type: RefSeq
SIO_000068: refseq
dblink: PRJNA558048
dblink: SAMN02981239
keyword: WGS
keyword: RefSeq
source: Taeniopygia guttata (zebra finch)
organism: Taeniopygia guttata
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Taeniopygia.
reference: 1
references: 33911273
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM012107.2.\nOn May 24, 2021 this sequence version replaced NC_044237.1.\nAssembly name: bTaeGut1.4.pri\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2021/05/04. The original whole-genome shotgun project has the\naccession RRCB00000000.2.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 09-APR-2021\nAssembly Method :: FALCON v. 5.1.1; FALCON unzip v.\n Nov2017(uc4); Purge_dups v. 1.0.1;\n Scaff10X v. 4.1.0; Bionano Solve\n BspQI/BssSI v. 3.4; Salsa2 v. 2.2.; Arrow\n polishing v. variantCaller 2.3.3; Merfin\n filtering v. 0.1; longranger align v.\n 2.2.2; freebayes polishing v. 1.3.1;\n gEVAL manual curation v. 2021-04-09; VGP\n pipeline v. 1.7\nAssembly Name :: bTaeGut1.4.pri\nDiploid :: Principal Pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 88.2x\nSequencing Technology :: PacBio RSII; 10X Genomics linked reads;\n Bionano Genomics two enzymes; Arima\n Genomics Hi-C\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Taeniopygia guttata Annotation\n Release 106\nAnnotation Version :: 106\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.6\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 2880192
topology: linear
so has quality: SO_0000987
location: 1..2880192
location: region:1-2880192:1
RO_0002162: 59729

NC_044237
type: RefSeq
SIO_000068: refseq

PRJNA558048
type: BioProject
SIO_000068: bioproject

SAMN02981239
type: BioSample
SIO_000068: biosample

1
title: Towards complete and error-free genome assemblies of all vertebrate species
author: Rhie, A.
author: McCarthy, S.A.
author: Fedrigo, O.
author: Damas, J.
author: Formenti, G.
author: Koren, S.
author: Uliano-Silva, M.
author: Chow, W.
author: Fungtammasan, A.
author: Kim, J.
author: Lee, C.
author: Ko, B.J.
author: Chaisson, M.
author: Gedman, G.L.
author: Cantin, L.J.
author: Thibaud-Nissen, F.
author: Haggerty, L.
author: Bista, I.
author: Smith, M.
author: Haase, B.
author: Mountcastle, J.
author: Winkler, S.
author: Paez, S.
author: Howard, J.
author: Vernes, S.C.
author: Lama, T.M.
author: Grutzner, F.
author: Warren, W.C.
author: Balakrishnan, C.N.
author: Burt, D.
author: George, J.M.
author: Biegler, M.T.
author: Iorns, D.
author: Digby, A.
author: Eason, D.
author: Robertson, B.
author: Edwards, T.
author: Wilkinson, M.
author: Turner, G.
author: Meyer, A.
author: Kautt, A.F.
author: Franchini, P.
author: Detrich, H.W. 3rd
author: Svardal, H.
author: Wagner, M.
author: Naylor, G.J.P.
author: Pippel, M.
author: Malinsky, M.
author: Mooney, M.
author: Simbirsky, M.
author: Hannigan, B.T.
author: Pesout, T.
author: Houck, M.
author: Misuraca, A.
author: Kingan, S.B.
author: Hall, R.
author: Kronenberg, Z.
author: Sovic, I.
author: Dunn, C.
author: Ning, Z.
author: Hastie, A.
author: Lee, J.
author: Selvaraj, S.
author: Green, R.E.
author: Putnam, N.H.
author: Gut, I.
author: Ghurye, J.
author: Garrison, E.
author: Sims, Y.
author: Collins, J.
author: Pelan, S.
author: Torrance, J.
author: Tracey, A.
author: Wood, J.
author: Dagnew, R.E.
author: Guan, D.
author: London, S.E.
author: Clayton, D.F.

33911273
type: PubMed
SIO_000068: pubmed

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2880192:1
position: 2880192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-2880192:1:source
so part of: sequence
organism: Taeniopygia guttata
mol type: genomic DNA
isolate: Blue55
chromosome: 25
sex: female
tissue type: Muscle, blood, brain
dev stage: adult
country: USA
lat lon: 36.0014 N 78.9382 W
collected by: Matt Biegler, Duke University and Rockefeller University

59729
type: Taxonomy
SIO_000068: taxonomy

LOC105760177
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC105760177
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 15789..17410
location: region:15789-17410:1
so has part: feature:15789-17410:1:exon
subclass of: SO_0000010

105760177
type: Gene
SIO_000068: ncbigene

position:15789:1
position: 15789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17410:1
position: 17410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15789-17410:1:exon

LOC105760177
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC105760177
product: olfactory receptor 49-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 83% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030291642.3
SIO_010081: LOC105760177
subclass of: SO_0000673
so part of: LOC105760177
location: 15789..17410
location: region:15789-17410:1
so has part: feature:15789-17410:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15789-17410:1:exon

LOC105760177
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC105760177
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: olfactory receptor 49-like
translation: MGPENETAVTEFILEGFPERDPRLQVFFSWALLLMYLTTVMGNAAIIFLVCVDHHLQTPMYFFISNLAFLEIWFTSSTSSKLFVMLSSGQNTLSLSSCFAQNYFYFALGCTEFILLVVMSFDRYVAICQPLLHAAIMKPQLSVHLVVAAWVLGFALLSYQLFFLSELSFCGSKIPHFLCDNSLLFKLSCSDTSLLWKIDSVFLPCVVLGSLGLTLAFYICILFCVLHLPAASGRKKALTACSSHLITLSIAYGSCIALYTCPADVSLRTNRIVALLNTVLYPFLNPFIYSLRNKPVILALNKSIARARTKLFP
SIO_010081: LOC105760177
subclass of: SO_0000673
so part of: LOC105760177
location: 15798..16739
location: region:15798-16739:1
so has part: feature:15798-16739:1:exon

XP_030147502.3
type: Protein
SIO_000068: ncbiprotein

position:15798:1
position: 15798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16739:1
position: 16739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15798-16739:1:exon

LOC115498493
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC115498493
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(21238..28805)
location: region:21238-28805:-1
so has part: feature:21238-28805:-1:exon
subclass of: SO_0000010

115498493
type: Gene
SIO_000068: ncbigene

position:21238:-1
position: 21238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28805:-1
position: 28805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21238-28805:-1:exon

LOC115498493
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC115498493
product: toll-like receptor 13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_030291611.3
SIO_010081: LOC115498493
subclass of: SO_0000673
so part of: LOC115498493
location: complement(join(21238..27840,28303..28805))
location: region:21238-28805:-1
so has part: feature:28303-28805:-1:exon
so has part: feature:21238-27840:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:28303-28805:-1:exon

position:28303:-1
position: 28303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:21238-27840:-1:exon

position:27840:-1
position: 27840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115498493
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC115498493
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: toll-like receptor 13
translation: MCTPLLVALVTLVMVPEGVSPYGFRNCIQAPWDPGLFRCIQRFLSTVGAAVGDLPSTATSLNLSVNILRQVPPGAFAHLPQLYTLDLTHNQLEHLAPGAFWGLSALVHLDLAHNNVSVLATGVFSGLGNLSTLRLDHNPLQKVAPGAFQPLAALSTLWLRDGRLRALEPVAVAVGNLTHLDLLDLCVNMLSTLGPGLPPTLRVLRLCNNSLGALSGATPGVMPSGLRVLDLSYNNISDPAPLARLCLSNLTFLHLAGNPLDVAQLLRVAGISPRQVDVSGLQVGTSGLEYLCQQLRGQQLQRLQLQRVGLTAMPDGALAECPVLGALDLSGNRLRHLGCVGRLLNRAQHAALRELVAEHNLLQRLPSCNGSPVLRQLHNVSLRFNRILVAGAGAFDNAPALRQLRLDVNGLARLDRAALRGLHDLQHLRLDNNLLTDLLPGSFADLHQLGDLNLRNNRVAVLFPGAFKGLDHLQTLDLGGNNLQHLAAKAFQGLPRLCWLYLDRNRLLEVRAAAFQPVQLTLGVLDLRANALRYLSRHLRQLPPFRYLHNLYDLKLQAQQPYGLRVVPQRFFQGLGALRSLYLAQNSLSAIPADAFDDLARLRYLTLADSNGGMGHLPAGVFKNLSQLRSLNLESAGLRSLGPEVFGNLTQLQELRLAKNELRTLDGTLATRLPTLRYLDLRKCPLSCSCDNAWLPAWLVRGPVQVVYLYNYTCGEMGGASTYLHCFDTRVCYLDMGRYLFAGTAPAVLLLLVLPLLYHRGYWRLRYQLFLLHAWARGRWRREQRRYTYDTFVSYNSGDERWVLEELVPELERGALRLCLHHRDFRPGRAIVDNIVDAVYNSRHTVCVVSRGYLRSEWCSLEIQMASYRLFDELRDVLVLIFLEDIPEAELSAFHRMRRVLLRRTHLRWPSELPARPLFWAKLRCALSAGQEEEDREEGCPDRTGTTVVVPPQKSSFLPQNHWLFSWKYALHNGDERNKKEEEAEEDEEEVGEEEKGCQEREKLL
SIO_010081: LOC115498493
subclass of: SO_0000673
so part of: LOC115498493
location: complement(24801..27818)
location: region:24801-27818:-1
so has part: feature:24801-27818:-1:exon

XP_030147471.3
type: Protein
SIO_000068: ncbiprotein

position:24801:-1
position: 24801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27818:-1
position: 27818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24801-27818:-1:exon

LOC121471129
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121471129
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 30021..30792
location: region:30021-30792:1
so has part: feature:30021-30792:1:exon
subclass of: SO_0000010

121471129
type: Gene
SIO_000068: ncbigene

position:30021:1
position: 30021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30792:1
position: 30792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30021-30792:1:exon

LOC121471129
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC121471129
product: transmembrane protein 145-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_041721160.1
SIO_010081: LOC121471129
subclass of: SO_0000673
so part of: LOC121471129
location: join(30021..30258,30696..30792)
location: region:30021-30792:1
so has part: feature:30021-30258:1:exon
so has part: feature:30696-30792:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:30021-30258:1:exon

position:30258:1
position: 30258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:30696-30792:1:exon

position:30696:1
position: 30696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121471129
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC121471129
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 145-like
translation: MGESWGRGCRDCAVQGLQLPPRARALVVQSSQRTRGGHPTSEPRKGSAPPGDGLELEYEMVLSTGDSFRTRRLSADEFGILETDITLVLIIILTLLISEQLGEI
SIO_010081: LOC121471129
subclass of: SO_0000673
so part of: LOC121471129
location: join(30024..30258,30696..30775)
location: region:30024-30775:1
so has part: feature:30024-30258:1:exon
so has part: feature:30696-30775:1:exon

XP_041577094.1
type: Protein
SIO_000068: ncbiprotein

position:30024:1
position: 30024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30775:1
position: 30775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30024-30258:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:30696-30775:1:exon

LOC115498527
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC115498527
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(35098..36007)
location: region:35098-36007:-1
so has part: feature:35098-36007:-1:exon
subclass of: SO_0000010

115498527
type: Gene
SIO_000068: ncbigene

position:35098:-1
position: 35098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:36007:-1
position: 36007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35098-36007:-1:exon

LOC115498527
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC115498527
product: transmembrane protein 145-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_032752967.2
SIO_010081: LOC115498527
subclass of: SO_0000673
so part of: LOC115498527
location: complement(join(35098..35334,35770..36007))
location: region:35098-36007:-1
so has part: feature:35770-36007:-1:exon
so has part: feature:35098-35334:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:35770-36007:-1:exon

position:35770:-1
position: 35770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:35098-35334:-1:exon

position:35334:-1
position: 35334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115498527
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC115498527
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 145-like
translation: MGESWGRGCRDCAVQGLQLPPRARALVVQSSQRTRGGHPTSEPRKGSAPPGDGLELEYEMVLSTGDSFRTRRLSADEFGILETDITLVLIIILTLLISEQLGEI
SIO_010081: LOC115498527
subclass of: SO_0000673
so part of: LOC115498527
location: complement(join(35255..35334,35770..36004))
location: region:35255-36004:-1
so has part: feature:35770-36004:-1:exon
so has part: feature:35255-35334:-1:exon

XP_032608858.2
type: Protein
SIO_000068: ncbiprotein

position:35255:-1
position: 35255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:36004:-1
position: 36004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35770-36004:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:35255-35334:-1:exon

LOC121468054
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121468054
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 36790..40315
location: region:36790-40315:1
so has part: feature:36790-40315:1:exon
subclass of: SO_0000010

121468054
type: Gene
SIO_000068: ncbigene

position:36790:1
position: 36790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40315:1
position: 40315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36790-40315:1:exon

LOC121468054
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC121468054
product: leucine-rich repeat-containing G-protein coupled receptor 5-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_041721154.1
SIO_010081: LOC121468054
subclass of: SO_0000673
so part of: LOC121468054
location: join(36790..37288,37750..40315)
location: region:36790-40315:1
so has part: feature:36790-37288:1:exon
so has part: feature:37750-40315:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:36790-37288:1:exon

position:37288:1
position: 37288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:37750-40315:1:exon

position:37750:1
position: 37750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121468054
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC121468054
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat-containing G-protein coupled receptor 5-like
translation: MCTPLLVALVTLVMVPEGVSPYGFRNCIQAPWDPGLFRCIQRFLSTVGAAVGDLPSTATSLNLSVNILRQVPPGAFAHLPQLYTLDLTHNQLEHLAPGAFWGLSALVHLDLAHNNVSVLATGVFSGLGNLSTLRLDHNPLQKVAPGAFQPLAALSTLWLRDGRLRALEPVAVAVGNLTHLDLLDLCVNMLSTLGPGLPPTLRVLRLCNNSLGALSGATPGVMPSGLRVLDLSYNNISDPAPLARLCLSNLTFLHLAGNPLDVAQLLRVAGISPRQVDVSGLQVGTSGLEYLCQQLRGQQLQRLQLQRMGLTAMPDGALAECPVLGALDLSGNRLRHLGCVGRLLNRAQHAALRELVAEHNLLQRLPSCSGSPVLRQLHNVSLRFNRILVAGAGAFDNAPALRQLRLDVNGLARLDRAALRGLHDLRHLRLDNNLLTDLLPGSFADLHQLGDLNLRNNRVAVLFPGAFKGLDPLQTLDIFIHFLIYCLHISIVRFRFLKGLYCLK
SIO_010081: LOC121468054
subclass of: SO_0000673
so part of: LOC121468054
location: 37772..39286
location: region:37772-39286:1
so has part: feature:37772-39286:1:exon

XP_041577088.1
type: Protein
SIO_000068: ncbiprotein

position:37772:1
position: 37772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39286:1
position: 39286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37772-39286:1:exon

LOC115490551
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC115490551
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 43729..47534
location: region:43729-47534:1
so has part: feature:43729-47534:1:exon
subclass of: SO_0000010

115490551
type: Gene
SIO_000068: ncbigene

position:43729:1
position: 43729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47534:1
position: 47534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43729-47534:1:exon

LOC115490551
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC115490551
product: cilia- and flagella-associated protein 45
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030291613.3
SIO_010081: LOC115490551
subclass of: SO_0000673
so part of: LOC115490551
location: join(43729..43953,44117..44244,44553..44694,45052..45222,45370..45548,45683..45812,46051..46197,46295..46408,46622..46815,46968..47192,47363..47534)
location: region:43729-47534:1
so has part: feature:43729-43953:1:exon
so has part: feature:44117-44244:1:exon
so has part: feature:44553-44694:1:exon
so has part: feature:45052-45222:1:exon
so has part: feature:45370-45548:1:exon
so has part: feature:45683-45812:1:exon
so has part: feature:46051-46197:1:exon
so has part: feature:46295-46408:1:exon
so has part: feature:46622-46815:1:exon
so has part: feature:46968-47192:1:exon
so has part: feature:47363-47534:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:43729-43953:1:exon

position:43953:1
position: 43953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:44117-44244:1:exon

position:44117:1
position: 44117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44244:1
position: 44244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:44553-44694:1:exon

position:44553:1
position: 44553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44694:1
position: 44694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:45052-45222:1:exon

position:45052:1
position: 45052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45222:1
position: 45222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:45370-45548:1:exon

position:45370:1
position: 45370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45548:1
position: 45548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:45683-45812:1:exon

position:45683:1
position: 45683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45812:1
position: 45812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:46051-46197:1:exon

position:46051:1
position: 46051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46197:1
position: 46197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:46295-46408:1:exon

position:46295:1
position: 46295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46408:1
position: 46408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:46622-46815:1:exon

position:46622:1
position: 46622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46815:1
position: 46815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:46968-47192:1:exon

position:46968:1
position: 46968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47192:1
position: 47192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:47363-47534:1:exon

position:47363:1
position: 47363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115490551
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC115490551
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cilia- and flagella-associated protein 45
translation: MPAVSPITLGCQLQDIVIPPTLCDSAMAAATAGSGSQSLCLENSSRGSLLPRRQRLPPPGFQSLLPKVTGYSSPIVILRDMPKQPELQPSVRYKPKSTRIIAKDLIRELIIPQERPKPCLIIGEKEYERIKESARAPTEVERWDRLKTLRARQDAAFEALKKAQIEEQRKAELEDKRDHRRDVEEELQQEEQKLLQRAARMRLEQEEDVRELNALFLNAKCNMIRDKQVLEKRMIHKELVEEEKRLDRMMEMEREKGMEVQEELECQRKQELIRARQDIVKQMEQRAEEQALRAEELYQEGQRQLERLEQMKREDRKAWEQKQERLKQIRADIKRFNMESQRLKDQERERDRLEDERVLEQQRQKAEREAALEAKQQQLRLEKEKELAQLRATQERAQDWQAEQDALRAKRNQEVADREWRRRELEKARKKAELEQQLKQDRLEQVAQKEQYLAMQVEQDHQEFQRVLRAHQEQLEREKLEREQRELRQRAHAEYLRRQIQELQQQRQRERAALMAEARQQQQEVRQRSQRLAQFRQQKLQEFRATGVPEKYCAQVERKAHSCASAIPS
SIO_010081: LOC115490551
subclass of: SO_0000673
so part of: LOC115490551
location: join(43753..43953,44117..44244,44553..44694,45052..45222,45370..45548,45683..45812,46051..46197,46295..46408,46622..46815,46968..47192,47363..47441)
location: region:43753-47441:1
so has part: feature:43753-43953:1:exon
so has part: feature:44117-44244:1:exon
so has part: feature:44553-44694:1:exon
so has part: feature:45052-45222:1:exon
so has part: feature:45370-45548:1:exon
so has part: feature:45683-45812:1:exon
so has part: feature:46051-46197:1:exon
so has part: feature:46295-46408:1:exon
so has part: feature:46622-46815:1:exon
so has part: feature:46968-47192:1:exon
so has part: feature:47363-47441:1:exon

XP_030147473.3
type: Protein
SIO_000068: ncbiprotein

position:43753:1
position: 43753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47441:1
position: 47441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43753-43953:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:44117-44244:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:44553-44694:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:45052-45222:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:45370-45548:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:45683-45812:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:46051-46197:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:46295-46408:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:46622-46815:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:46968-47192:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:47363-47441:1:exon

LOC115498377
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC115498377
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 54371..65825
location: region:54371-65825:1
so has part: feature:54371-65825:1:exon
subclass of: SO_0000010

115498377
type: Gene
SIO_000068: ncbigene

position:54371:1
position: 54371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:65825:1
position: 65825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54371-65825:1:exon

LOC115498377
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC115498377
product: uncharacterized LOC115498377
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 83% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041721009.1
SIO_010081: LOC115498377
subclass of: SO_0000673
so part of: LOC115498377
location: join(54371..54584,55177..55197,55288..55518,55794..56960,57044..57127,57519..57540,57628..57716,57796..57903,63034..63264,63540..63806,64002..64706,64790..64873,65265..65286,65374..65453,65549..65825)
location: region:54371-65825:1
so has part: feature:54371-54584:1:exon
so has part: feature:55177-55197:1:exon
so has part: feature:55288-55518:1:exon
so has part: feature:55794-56960:1:exon
so has part: feature:57044-57127:1:exon
so has part: feature:57519-57540:1:exon
so has part: feature:57628-57716:1:exon
so has part: feature:57796-57903:1:exon
so has part: feature:63034-63264:1:exon
so has part: feature:63540-63806:1:exon
so has part: feature:64002-64706:1:exon
so has part: feature:64790-64873:1:exon
so has part: feature:65265-65286:1:exon
so has part: feature:65374-65453:1:exon
so has part: feature:65549-65825:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:54371-54584:1:exon

position:54584:1
position: 54584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:55177-55197:1:exon

position:55177:1
position: 55177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55197:1
position: 55197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:55288-55518:1:exon

position:55288:1
position: 55288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55518:1
position: 55518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:55794-56960:1:exon

position:55794:1
position: 55794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:56960:1
position: 56960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:57044-57127:1:exon

position:57044:1
position: 57044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:57127:1
position: 57127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:57519-57540:1:exon

position:57519:1
position: 57519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:57540:1
position: 57540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:57628-57716:1:exon

position:57628:1
position: 57628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:57716:1
position: 57716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:57796-57903:1:exon

position:57796:1
position: 57796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:57903:1
position: 57903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:63034-63264:1:exon

position:63034:1
position: 63034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:63264:1
position: 63264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:63540-63806:1:exon

position:63540:1
position: 63540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:63806:1
position: 63806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:64002-64706:1:exon

position:64002:1
position: 64002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:64706:1
position: 64706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:64790-64873:1:exon

position:64790:1
position: 64790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:64873:1
position: 64873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:65265-65286:1:exon

position:65265:1
position: 65265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:65286:1
position: 65286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:65374-65453:1:exon

position:65374:1
position: 65374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:65453:1
position: 65453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:65549-65825:1:exon

position:65549:1
position: 65549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115498377
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC115498377
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC115498377
translation: MSHQVPTLPPSCGHPAPTKGHLHVGTSRGLASFPFIRRAASQGSGGHSRRGQPVHMAGDTGMAGKVALLLWAQTLGLAGAQATQLLVEPPWRPAVLWDPVTLTCQGSGTAGATTWYKDGQRWGQQGHDHITVTESGTYTCDRPGSGHSRHVKVLDDQLVLQVPTRTLLEGDTVTLRCRCRQGNPVSSVFFYHEEKELGEFQNGTELFLSHLQLHHSGRYRCRGWVNSRVAQGWEDSAPVTVTVHGEHPTAATPTAPQLFPRNWGSPAPPAPISCPEPFPVPVLEVPRDPTEGSPLTLSCLSTPSPLWPRAPLLHVFYRDGQVVGVPQGSPQLLVPAVGVSHSGNYSCEVRSEGGAVQKSSAWLRITVRSECEDGHGEPPQTPWVPPWAPPCPPETFLGSPHFCPMSPLTPLCSDPIPDIPLPTHTPVPIPPHQLPAPRCDLSPVCVPAVPVANATITLSPLAHQVRAGDPVTLRCSVQVGSAPVTFTWRHNGQEVAQGPLLELGDVSVGHSGTYQCVATNQLDSQQALSPELVLTVTSQGHMDTVVAGIGWALLFLVLLVGVIVAWHRWHRVAARKHQERPSPEPLATPEEGEILYTHVVSTKQAQRENRPSCITVPQERQVTYTELPGLHRRPCETSDINEIVLCAQTTQLLVEPRWRPAVLWDRVTLTCQGSGTAGATTWYKDGQRWGQQGHDHITVTESGTYTCDRPGSGHSRHVKVLDDQLVLQVPTRTLLEGDTVTLRCQCRQGNPVSSVFFYHEEKELVEFQNGTELFLSHLQLHHSGRYRCRGWVNSRVAQGWEDSAPVTVTVHAPLLHVFYRDGQVVGVPQGSPQLLVPAVGVSHSGNYSCEVRSEGGAVQKSSAWLRIMVRSECGDGHGEPPQTPWVPPWAPPCPPDTFLGSPHFCPMSPLTPLCSDPIPNIPLPTHTPIPIPPHQLPAPRCDLSPVCVPAVPVANATITLSPLAHQVRAGDPVTLRCSVQVGSAPVTFTWRHNGQEVAQGPLLELGDVNVGHSGTYQCVATNQLDSHQALSPELVLTVTSQGHMDPVVAGIGWALLFLVLLVGVIVAWHRWHRVAARKHQERPSPEPLATPEEGEILYTHVVSTKQAQRPSCITVHQERQVTYTELPGLHGRPCETSDINEIVL
SIO_010081: LOC115498377
subclass of: SO_0000673
so part of: LOC115498377
location: join(54371..54584,55177..55197,55288..55518,55794..56960,57044..57127,57519..57540,57628..57716,57796..57903,63034..63264,63540..63806,64002..64706,64790..64873,65265..65286,65374..65453,65549..65658)
location: region:54371-65658:1
so has part: feature:54371-54584:1:exon
so has part: feature:55177-55197:1:exon
so has part: feature:55288-55518:1:exon
so has part: feature:55794-56960:1:exon
so has part: feature:57044-57127:1:exon
so has part: feature:57519-57540:1:exon
so has part: feature:57628-57716:1:exon
so has part: feature:57796-57903:1:exon
so has part: feature:63034-63264:1:exon
so has part: feature:63540-63806:1:exon
so has part: feature:64002-64706:1:exon
so has part: feature:64790-64873:1:exon
so has part: feature:65265-65286:1:exon
so has part: feature:65374-65453:1:exon
so has part: feature:65549-65658:1:exon

XP_041576943.1
type: Protein
SIO_000068: ncbiprotein

position:65658:1
position: 65658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54371-54584:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:55177-55197:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:55288-55518:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:55794-56960:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:57044-57127:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:57519-57540:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:57628-57716:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:57796-57903:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:63034-63264:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:63540-63806:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:64002-64706:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:64790-64873:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:65265-65286:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:65374-65453:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:65549-65658:1:exon

LOC115498494
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC115498494
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 62210..64060
location: region:62210-64060:1
so has part: feature:62210-64060:1:exon
subclass of: SO_0000010

115498494
type: Gene
SIO_000068: ncbigene

position:62210:1
position: 62210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:64060:1
position: 64060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62210-64060:1:exon

LOC115498494
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC115498494
product: low affinity immunoglobulin gamma Fc region receptor II-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_030291622.3
SIO_010081: LOC115498494
subclass of: SO_0000673
so part of: LOC115498494
location: join(62210..62330,62923..62943,63034..63264,63540..64060)
location: region:62210-64060:1
so has part: feature:62210-62330:1:exon
so has part: feature:62923-62943:1:exon
so has part: feature:63034-63264:1:exon
so has part: feature:63540-64060:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:62210-62330:1:exon

position:62330:1
position: 62330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:62923-62943:1:exon

position:62923:1
position: 62923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:62943:1
position: 62943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:63034-63264:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:63540-64060:1:exon

LOC115498494
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC115498494
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: low affinity immunoglobulin gamma Fc region receptor II-like
translation: MAGDTGMAGKVALLLWAQTLGLAGAQTTQLLVEPRWRPAVLWDRVTLTCQGSGTAGATTWYKDGQRWGQQGHDHITVTESGTYTCDRPGSGHSRHVKVLDDQLVLQVPTRTLLEGDTVTLRCQCRQGNPVSSVFFYHEEKELVEFQNGTELFLSHLQLHHSGRYRCRGWVNSRVAQGWEDSAPVTVTVHGEHPTAATPTAPQLFPRNWGSPAPPAPISCPEPFPVPVLEVPPEPTEGSPLTLSCLSTPSPLWP
SIO_010081: LOC115498494
subclass of: SO_0000673
so part of: LOC115498494
location: join(62282..62330,62923..62943,63034..63264,63540..64000)
location: region:62282-64000:1
so has part: feature:62282-62330:1:exon
so has part: feature:62923-62943:1:exon
so has part: feature:63034-63264:1:exon
so has part: feature:63540-64000:1:exon

XP_030147482.3
type: Protein
SIO_000068: ncbiprotein

position:62282:1
position: 62282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:64000:1
position: 64000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62282-62330:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:62923-62943:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:63034-63264:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:63540-64000:1:exon

LOC100231660
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC100231660
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(75482..80182)
location: region:75482-80182:-1
so has part: feature:75482-80182:-1:exon
subclass of: SO_0000010

100231660
type: Gene
SIO_000068: ncbigene

position:75482:-1
position: 75482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:80182:-1
position: 80182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:75482-80182:-1:exon

LOC100231660
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC100231660
product: cilia- and flagella-associated protein 45, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_041721008.1
SIO_010081: LOC100231660
subclass of: SO_0000673
so part of: LOC100231660
location: complement(join(75482..76287,76459..76683,76836..77029,77243..77356,77454..77600,77839..77968,78103..78281,78428..78598,78956..79097,79406..79533,80076..80182))
location: region:75482-80182:-1
so has part: feature:80076-80182:-1:exon
so has part: feature:79406-79533:-1:exon
so has part: feature:78956-79097:-1:exon
so has part: feature:78428-78598:-1:exon
so has part: feature:78103-78281:-1:exon
so has part: feature:77839-77968:-1:exon
so has part: feature:77454-77600:-1:exon
so has part: feature:77243-77356:-1:exon
so has part: feature:76836-77029:-1:exon
so has part: feature:76459-76683:-1:exon
so has part: feature:75482-76287:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:80076-80182:-1:exon

position:80076:-1
position: 80076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:79406-79533:-1:exon

position:79406:-1
position: 79406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:79533:-1
position: 79533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:78956-79097:-1:exon

position:78956:-1
position: 78956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:79097:-1
position: 79097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:78428-78598:-1:exon

position:78428:-1
position: 78428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:78598:-1
position: 78598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:78103-78281:-1:exon

position:78103:-1
position: 78103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:78281:-1
position: 78281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:77839-77968:-1:exon

position:77839:-1
position: 77839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:77968:-1
position: 77968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:77454-77600:-1:exon

position:77454:-1
position: 77454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:77600:-1
position: 77600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:77243-77356:-1:exon

position:77243:-1
position: 77243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:77356:-1
position: 77356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:76836-77029:-1:exon

position:76836:-1
position: 76836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:77029:-1
position: 77029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:76459-76683:-1:exon

position:76459:-1
position: 76459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:76683:-1
position: 76683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:75482-76287:-1:exon

position:76287:-1
position: 76287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100231660
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC100231660
product: cilia- and flagella-associated protein 45, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_041721006.1
SIO_010081: LOC100231660
subclass of: SO_0000673
so part of: LOC100231660
location: complement(join(75482..76287,76459..76683,76836..77029,77243..77356,77454..77600,77839..77968,78103..78281,78428..78598,79406..79533,79725..80058))
location: region:75482-80058:-1
so has part: feature:79725-80058:-1:exon
so has part: feature:79406-79533:-1:exon
so has part: feature:78428-78598:-1:exon
so has part: feature:78103-78281:-1:exon
so has part: feature:77839-77968:-1:exon
so has part: feature:77454-77600:-1:exon
so has part: feature:77243-77356:-1:exon
so has part: feature:76836-77029:-1:exon
so has part: feature:76459-76683:-1:exon
so has part: feature:75482-76287:-1:exon

position:80058:-1
position: 80058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:79725-80058:-1:exon

position:79725:-1
position: 79725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:79406-79533:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:78428-78598:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:78103-78281:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:77839-77968:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:77454-77600:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:77243-77356:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:76836-77029:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:76459-76683:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:75482-76287:-1:exon

LOC100231660
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC100231660
product: cilia- and flagella-associated protein 45, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 43 samples with support for all annotated introns
transcript id: XM_030291617.3
SIO_010081: LOC100231660
subclass of: SO_0000673
so part of: LOC100231660
location: complement(join(75482..76287,76459..76683,76836..77029,77243..77356,77454..77600,77839..77968,78103..78281,78428..78598,78956..79097,79406..79533,79725..79939))
location: region:75482-79939:-1
so has part: feature:79725-79939:-1:exon
so has part: feature:79406-79533:-1:exon
so has part: feature:78956-79097:-1:exon
so has part: feature:78428-78598:-1:exon
so has part: feature:78103-78281:-1:exon
so has part: feature:77839-77968:-1:exon
so has part: feature:77454-77600:-1:exon
so has part: feature:77243-77356:-1:exon
so has part: feature:76836-77029:-1:exon
so has part: feature:76459-76683:-1:exon
so has part: feature:75482-76287:-1:exon

position:79939:-1
position: 79939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:79725-79939:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:79406-79533:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:78956-79097:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:78428-78598:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:78103-78281:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:77839-77968:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:77454-77600:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:77243-77356:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:76836-77029:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:76459-76683:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:75482-76287:-1:exon

LOC100231660
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC100231660
product: cilia- and flagella-associated protein 45, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 55 samples with support for all annotated introns
transcript id: XM_041721007.1
SIO_010081: LOC100231660
subclass of: SO_0000673
so part of: LOC100231660
location: complement(join(75482..76287,76459..76683,76836..77029,77243..77356,77454..77600,77839..77968,78103..78281,78428..78598,78956..79393))
location: region:75482-79393:-1
so has part: feature:78956-79393:-1:exon
so has part: feature:78428-78598:-1:exon
so has part: feature:78103-78281:-1:exon
so has part: feature:77839-77968:-1:exon
so has part: feature:77454-77600:-1:exon
so has part: feature:77243-77356:-1:exon
so has part: feature:76836-77029:-1:exon
so has part: feature:76459-76683:-1:exon
so has part: feature:75482-76287:-1:exon

position:79393:-1
position: 79393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78956-79393:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:78428-78598:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:78103-78281:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:77839-77968:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:77454-77600:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:77243-77356:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:76836-77029:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:76459-76683:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:75482-76287:-1:exon

LOC100231660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC100231660
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cilia- and flagella-associated protein 45 isoform X1
translation: MHHPQVPAPARSRTLRELLGHCHGYSRSRQIVTVALDRNTHSEQTHPSLRSHHIVAVGSRTTGQHRQPRQWQCDGSRDYRHGIPVPPRPPPPASTAGISHRHGLQRPCGDVSECVKTSSRAALLQAQAQDHPSDHQGPDPGAHEALKKAQIEEQRKAELEDKRDHRRDVEEELQQEEQKLLQRAARMRLEQEEDVRELNALFLNAKCNMIRDKQVLEKRMIHKELVEEEKRLDRMMEMEWEKGMEVQEELECQRKQELIRARRDIVKQMEQRAEEQALRAEELYQEGQRQLERLEQMKREDRKAWEQKQERLKQIRADIKRFNVESQRLKDQERERDRLEDERVLEQQRQKAEREAALEAKQQQLRLEKEKELAQLRATQERAQDWQAEQDALRAKRNQEVADREWRRRELEKARKKAELEQQLKQDRLEQVAQKEQYLAMQVEQDHQEFQRVLRAHQEQLEREKLEREQRELRQRAHAEYLRRQIQELQQQRQRERAALMAEARQQQQEVRQRSQRLAQFRQQKLQEFRATGIPDKYFALVECRARSRASRAPS
SIO_010081: LOC100231660
subclass of: SO_0000673
so part of: LOC100231660
location: complement(join(76209..76287,76459..76683,76836..77029,77243..77356,77454..77600,77839..77968,78103..78281,78428..78598,79406..79533,79725..80025))
location: region:76209-80025:-1
so has part: feature:79725-80025:-1:exon
so has part: feature:79406-79533:-1:exon
so has part: feature:78428-78598:-1:exon
so has part: feature:78103-78281:-1:exon
so has part: feature:77839-77968:-1:exon
so has part: feature:77454-77600:-1:exon
so has part: feature:77243-77356:-1:exon
so has part: feature:76836-77029:-1:exon
so has part: feature:76459-76683:-1:exon
so has part: feature:76209-76287:-1:exon

XP_041576940.1
type: Protein
SIO_000068: ncbiprotein

position:76209:-1
position: 76209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:80025:-1
position: 80025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:79725-80025:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:79406-79533:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:78428-78598:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:78103-78281:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:77839-77968:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:77454-77600:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:77243-77356:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:76836-77029:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:76459-76683:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:76209-76287:-1:exon

LOC100231660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC100231660
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cilia- and flagella-associated protein 45 isoform X3
translation: MAAATTGTGSRSLLARRLQLPPPGFHTVMGSSDPVVMSQNVSKHPQELPSFKPKLKTIQVITKDLIRELIIPQERPKPCLIIGEKEYERIKESARAPAGVERWDRLKTLRARQDAAFEALKKAQIEEQRKAELEDKRDHRRDVEEELQQEEQKLLQRAARMRLEQEEDVRELNALFLNAKCNMIRDKQVLEKRMIHKELVEEEKRLDRMMEMEWEKGMEVQEELECQRKQELIRARRDIVKQMEQRAEEQALRAEELYQEGQRQLERLEQMKREDRKAWEQKQERLKQIRADIKRFNVESQRLKDQERERDRLEDERVLEQQRQKAEREAALEAKQQQLRLEKEKELAQLRATQERAQDWQAEQDALRAKRNQEVADREWRRRELEKARKKAELEQQLKQDRLEQVAQKEQYLAMQVEQDHQEFQRVLRAHQEQLEREKLEREQRELRQRAHAEYLRRQIQELQQQRQRERAALMAEARQQQQEVRQRSQRLAQFRQQKLQEFRATGIPDKYFALVECRARSRASRAPS
SIO_010081: LOC100231660
subclass of: SO_0000673
so part of: LOC100231660
location: complement(join(76209..76287,76459..76683,76836..77029,77243..77356,77454..77600,77839..77968,78103..78281,78428..78598,78956..79097,79406..79533,79725..79805))
location: region:76209-79805:-1
so has part: feature:79725-79805:-1:exon
so has part: feature:79406-79533:-1:exon
so has part: feature:78956-79097:-1:exon
so has part: feature:78428-78598:-1:exon
so has part: feature:78103-78281:-1:exon
so has part: feature:77839-77968:-1:exon
so has part: feature:77454-77600:-1:exon
so has part: feature:77243-77356:-1:exon
so has part: feature:76836-77029:-1:exon
so has part: feature:76459-76683:-1:exon
so has part: feature:76209-76287:-1:exon

XP_030147477.3
type: Protein
SIO_000068: ncbiprotein

position:79805:-1
position: 79805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:79725-79805:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:79406-79533:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:78956-79097:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:78428-78598:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:78103-78281:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:77839-77968:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:77454-77600:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:77243-77356:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:76836-77029:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:76459-76683:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:76209-76287:-1:exon

LOC100231660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC100231660
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cilia- and flagella-associated protein 45 isoform X4
translation: MGSSDPVVMSQNVSKHPQELPSFKPKLKTIQVITKDLIRELIIPQERPKPCLIIGEKEYERIKESARAPAGVERWDRLKTLRARQDAAFEALKKAQIEEQRKAELEDKRDHRRDVEEELQQEEQKLLQRAARMRLEQEEDVRELNALFLNAKCNMIRDKQVLEKRMIHKELVEEEKRLDRMMEMEWEKGMEVQEELECQRKQELIRARRDIVKQMEQRAEEQALRAEELYQEGQRQLERLEQMKREDRKAWEQKQERLKQIRADIKRFNVESQRLKDQERERDRLEDERVLEQQRQKAEREAALEAKQQQLRLEKEKELAQLRATQERAQDWQAEQDALRAKRNQEVADREWRRRELEKARKKAELEQQLKQDRLEQVAQKEQYLAMQVEQDHQEFQRVLRAHQEQLEREKLEREQRELRQRAHAEYLRRQIQELQQQRQRERAALMAEARQQQQEVRQRSQRLAQFRQQKLQEFRATGIPDKYFALVECRARSRASRAPS
SIO_010081: LOC100231660
subclass of: SO_0000673
so part of: LOC100231660
location: complement(join(76209..76287,76459..76683,76836..77029,77243..77356,77454..77600,77839..77968,78103..78281,78428..78598,78956..79097,79406..79530))
location: region:76209-79530:-1
so has part: feature:79406-79530:-1:exon
so has part: feature:78956-79097:-1:exon
so has part: feature:78428-78598:-1:exon
so has part: feature:78103-78281:-1:exon
so has part: feature:77839-77968:-1:exon
so has part: feature:77454-77600:-1:exon
so has part: feature:77243-77356:-1:exon
so has part: feature:76836-77029:-1:exon
so has part: feature:76459-76683:-1:exon
so has part: feature:76209-76287:-1:exon

XP_041576942.1
type: Protein
SIO_000068: ncbiprotein

position:79530:-1
position: 79530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:79406-79530:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:78956-79097:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:78428-78598:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:78103-78281:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:77839-77968:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:77454-77600:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:77243-77356:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:76836-77029:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:76459-76683:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:76209-76287:-1:exon

LOC100231660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC100231660
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cilia- and flagella-associated protein 45 isoform X2
translation: MGVSAAFQYLWDWQCALTTPRDPAPCIPAWCHFHHTFPSCLTPKQDSQVPTASPALPKLIWAGLVAEWAAQGAQGAVGISMPLSSLPGLPSIPQERPKPCLIIGEKEYERIKESARAPAGVERWDRLKTLRARQDAAFEALKKAQIEEQRKAELEDKRDHRRDVEEELQQEEQKLLQRAARMRLEQEEDVRELNALFLNAKCNMIRDKQVLEKRMIHKELVEEEKRLDRMMEMEWEKGMEVQEELECQRKQELIRARRDIVKQMEQRAEEQALRAEELYQEGQRQLERLEQMKREDRKAWEQKQERLKQIRADIKRFNVESQRLKDQERERDRLEDERVLEQQRQKAEREAALEAKQQQLRLEKEKELAQLRATQERAQDWQAEQDALRAKRNQEVADREWRRRELEKARKKAELEQQLKQDRLEQVAQKEQYLAMQVEQDHQEFQRVLRAHQEQLEREKLEREQRELRQRAHAEYLRRQIQELQQQRQRERAALMAEARQQQQEVRQRSQRLAQFRQQKLQEFRATGIPDKYFALVECRARSRASRAPS
SIO_010081: LOC100231660
subclass of: SO_0000673
so part of: LOC100231660
location: complement(join(76209..76287,76459..76683,76836..77029,77243..77356,77454..77600,77839..77968,78103..78281,78428..78598,78956..79369))
location: region:76209-79369:-1
so has part: feature:78956-79369:-1:exon
so has part: feature:78428-78598:-1:exon
so has part: feature:78103-78281:-1:exon
so has part: feature:77839-77968:-1:exon
so has part: feature:77454-77600:-1:exon
so has part: feature:77243-77356:-1:exon
so has part: feature:76836-77029:-1:exon
so has part: feature:76459-76683:-1:exon
so has part: feature:76209-76287:-1:exon

XP_041576941.1
type: Protein
SIO_000068: ncbiprotein

position:79369:-1
position: 79369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78956-79369:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:78428-78598:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:78103-78281:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:77839-77968:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:77454-77600:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:77243-77356:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:76836-77029:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:76459-76683:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:76209-76287:-1:exon

CCT3
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: CCT3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 80938..89154
location: region:80938-89154:1
so has part: feature:80938-89154:1:exon
subclass of: SO_0000010

100232703
type: Gene
SIO_000068: ncbigene

position:80938:1
position: 80938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:89154:1
position: 89154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:80938-89154:1:exon

CCT3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: CCT3
product: chaperonin containing TCP1 subunit 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 ESTs, 5 long SRA reads, 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 164 samples with support for all annotated introns
transcript id: XM_002191201.6
SIO_010081: CCT3
subclass of: SO_0000673
so part of: CCT3
location: join(80938..81081,82667..82728,83228..83278,83359..83421,84004..84100,84461..84578,84763..84949,85436..85585,86018..86150,86616..86697,86808..86988,87522..87767,88010..88141,88809..89154)
location: region:80938-89154:1
so has part: feature:80938-81081:1:exon
so has part: feature:82667-82728:1:exon
so has part: feature:83228-83278:1:exon
so has part: feature:83359-83421:1:exon
so has part: feature:84004-84100:1:exon
so has part: feature:84461-84578:1:exon
so has part: feature:84763-84949:1:exon
so has part: feature:85436-85585:1:exon
so has part: feature:86018-86150:1:exon
so has part: feature:86616-86697:1:exon
so has part: feature:86808-86988:1:exon
so has part: feature:87522-87767:1:exon
so has part: feature:88010-88141:1:exon
so has part: feature:88809-89154:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:80938-81081:1:exon

position:81081:1
position: 81081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:82667-82728:1:exon

position:82667:1
position: 82667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:82728:1
position: 82728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:83228-83278:1:exon

position:83228:1
position: 83228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:83278:1
position: 83278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:83359-83421:1:exon

position:83359:1
position: 83359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:83421:1
position: 83421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:84004-84100:1:exon

position:84004:1
position: 84004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:84100:1
position: 84100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:84461-84578:1:exon

position:84461:1
position: 84461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:84578:1
position: 84578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:84763-84949:1:exon

position:84763:1
position: 84763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:84949:1
position: 84949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:85436-85585:1:exon

position:85436:1
position: 85436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:85585:1
position: 85585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:86018-86150:1:exon

position:86018:1
position: 86018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:86150:1
position: 86150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:86616-86697:1:exon

position:86616:1
position: 86616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:86697:1
position: 86697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:86808-86988:1:exon

position:86808:1
position: 86808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:86988:1
position: 86988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:87522-87767:1:exon

position:87522:1
position: 87522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:87767:1
position: 87767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:88010-88141:1:exon

position:88010:1
position: 88010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:88141:1
position: 88141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:88809-89154:1:exon

position:88809:1
position: 88809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CCT3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: CCT3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: T-complex protein 1 subunit gamma
translation: MMGPRPVLVLSQNTKRESGRKVQTGNITAAKTIADIIRTCLGPRAMMKMLLDPMGGIVMTNDGNAILREIQVQHPAAKSMIEISRTQDEEVGDGTTSVIILAGEMLSVAEHFLEQQMHPTVIIWAYRKALDDMISILKKIGTPVDVNNKEMMLKIIKSAINTKAINRWSDLACSIALDAVKTVEFEENGRKEIDIKKYAKVEKIPGGFSEDSCVLRGIMVNKDVTHPRMRRLIKNPRIVLLDCSLEYKKGESQTDIEITREEDFARILQMEEEYIQQMCEDLIRVKPDLVITEKGVSDLAQHYLMRANITAIRRVRKTDNNRIARACGARIVSRTDELREEDVGTGARLFEVKKIGDEYFAFITDCKDPKACTIILRGASKEILAEVERNLQDAMQVCRNVLMDPQLVPGGGATEMAVSHALTEKSKGMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRVLTSLRAKHTQEGSQTWGVNGETGALVDMKELGIWEPLAVKLQTYKTAMETAVLLLRIDDIVSGHKKKGDNQSKQPAAPEAAQE
SIO_010081: CCT3
subclass of: SO_0000673
so part of: CCT3
location: join(81051..81081,82667..82728,83228..83278,83359..83421,84004..84100,84461..84578,84763..84949,85436..85585,86018..86150,86616..86697,86808..86988,87522..87767,88010..88141,88809..88913)
location: region:81051-88913:1
so has part: feature:81051-81081:1:exon
so has part: feature:82667-82728:1:exon
so has part: feature:83228-83278:1:exon
so has part: feature:83359-83421:1:exon
so has part: feature:84004-84100:1:exon
so has part: feature:84461-84578:1:exon
so has part: feature:84763-84949:1:exon
so has part: feature:85436-85585:1:exon
so has part: feature:86018-86150:1:exon
so has part: feature:86616-86697:1:exon
so has part: feature:86808-86988:1:exon
so has part: feature:87522-87767:1:exon
so has part: feature:88010-88141:1:exon
so has part: feature:88809-88913:1:exon

XP_002191237.1
type: Protein
SIO_000068: ncbiprotein

position:81051:1
position: 81051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:88913:1
position: 88913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81051-81081:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:82667-82728:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:83228-83278:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:83359-83421:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:84004-84100:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:84461-84578:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:84763-84949:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:85436-85585:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:86018-86150:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:86616-86697:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:86808-86988:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:87522-87767:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:88010-88141:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:88809-88913:1:exon

LOC100190115
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC100190115
note: signal sequence receptor beta-like; Derived by automated computational analysis using gene prediction method: BestRefSeq,Gnomon.
so part of: sequence
location: complement(91922..97036)
location: region:91922-97036:-1
so has part: feature:91922-97036:-1:exon
subclass of: SO_0000010

100190115
type: Gene
SIO_000068: ncbigene

position:91922:-1
position: 91922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:97036:-1
position: 97036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:91922-97036:-1:exon

LOC100190115
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC100190115
product: signal sequence receptor beta-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 ESTs, 1 long SRA read, 23 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 105 samples with support for all annotated introns
transcript id: XM_030291138.3
SIO_010081: LOC100190115
subclass of: SO_0000673
so part of: LOC100190115
location: complement(join(91922..92474,93159..93236,93393..93501,93883..93981,94864..95018,96899..97036))
location: region:91922-97036:-1
so has part: feature:96899-97036:-1:exon
so has part: feature:94864-95018:-1:exon
so has part: feature:93883-93981:-1:exon
so has part: feature:93393-93501:-1:exon
so has part: feature:93159-93236:-1:exon
so has part: feature:91922-92474:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:96899-97036:-1:exon

position:96899:-1
position: 96899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:94864-95018:-1:exon

position:94864:-1
position: 94864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:95018:-1
position: 95018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:93883-93981:-1:exon

position:93883:-1
position: 93883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:93981:-1
position: 93981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:93393-93501:-1:exon

position:93393:-1
position: 93393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:93501:-1
position: 93501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:93159-93236:-1:exon

position:93159:-1
position: 93159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:93236:-1
position: 93236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:91922-92474:-1:exon

position:92474:-1
position: 92474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100190115
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC100190115
product: signal sequence receptor beta-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 ESTs, 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 72 samples with support for all annotated introns
transcript id: XM_030291140.3
SIO_010081: LOC100190115
subclass of: SO_0000673
so part of: LOC100190115
location: complement(join(91922..92474,93159..93236,93393..93501,93883..93981,94864..95018,96851..96906))
location: region:91922-96906:-1
so has part: feature:96851-96906:-1:exon
so has part: feature:94864-95018:-1:exon
so has part: feature:93883-93981:-1:exon
so has part: feature:93393-93501:-1:exon
so has part: feature:93159-93236:-1:exon
so has part: feature:91922-92474:-1:exon

position:96906:-1
position: 96906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:96851-96906:-1:exon

position:96851:-1
position: 96851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:94864-95018:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:93883-93981:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:93393-93501:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:93159-93236:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:91922-92474:-1:exon

LOC100190115
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC100190115
product: signal sequence receptor beta-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 ESTs, 1 long SRA read, 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 66 samples with support for all annotated introns
transcript id: XM_041720989.1
SIO_010081: LOC100190115
subclass of: SO_0000673
so part of: LOC100190115
location: complement(join(91922..92474,93159..93236,93393..93501,93883..93981,94864..95018,96800..96863))
location: region:91922-96863:-1
so has part: feature:96800-96863:-1:exon
so has part: feature:94864-95018:-1:exon
so has part: feature:93883-93981:-1:exon
so has part: feature:93393-93501:-1:exon
so has part: feature:93159-93236:-1:exon
so has part: feature:91922-92474:-1:exon

position:96863:-1
position: 96863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:96800-96863:-1:exon

position:96800:-1
position: 96800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:94864-95018:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:93883-93981:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:93393-93501:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:93159-93236:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:91922-92474:-1:exon

LOC100190115
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC100190115
product: signal sequence receptor beta-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 ESTs, 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 60 samples with support for all annotated introns
transcript id: XM_030291141.3
SIO_010081: LOC100190115
subclass of: SO_0000673
so part of: LOC100190115
location: complement(join(91922..92474,93159..93236,93393..93501,93883..93981,94864..95018,96581..96698))
location: region:91922-96698:-1
so has part: feature:96581-96698:-1:exon
so has part: feature:94864-95018:-1:exon
so has part: feature:93883-93981:-1:exon
so has part: feature:93393-93501:-1:exon
so has part: feature:93159-93236:-1:exon
so has part: feature:91922-92474:-1:exon

position:96698:-1
position: 96698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:96581-96698:-1:exon

position:96581:-1
position: 96581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:94864-95018:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:93883-93981:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:93393-93501:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:93159-93236:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:91922-92474:-1:exon

LOC100190115
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC100190115
product: signal sequence receptor beta-like
inference: similar to RNA sequence, mRNA (same species):RefSeq:NM_001245581.1
exception: annotated by transcript or proteomic data
note: The RefSeq transcript has 11 substitutions, 3 non-frameshifting indels compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001245581.1
SIO_010081: LOC100190115
subclass of: SO_0000673
so part of: LOC100190115
location: complement(join(91933..92474,93159..93236,93393..93501,93883..93981,94864..95018,96953..96982))
location: region:91933-96982:-1
so has part: feature:96953-96982:-1:exon
so has part: feature:94864-95018:-1:exon
so has part: feature:93883-93981:-1:exon
so has part: feature:93393-93501:-1:exon
so has part: feature:93159-93236:-1:exon
so has part: feature:91933-92474:-1:exon

position:91933:-1
position: 91933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:96982:-1
position: 96982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:96953-96982:-1:exon

position:96953:-1
position: 96953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:94864-95018:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:93883-93981:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:93393-93501:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:93159-93236:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:91933-92474:-1:exon

LOC100190115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC100190115
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative signal sequence receptor beta variant 2 isoform X1
translation: MKLPLLAVFALVSVARCEDGARLLASKSLLNRYAVEGKDLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPLKAGYFNFTSATITYVAQEGAPVVAGFTSAPGQGGILAQRDFDRRFSPHFLDWAAFGVMTLPSIGIPLLLWYSSKRKYDTPKSKKN
SIO_010081: LOC100190115
subclass of: SO_0000673
so part of: LOC100190115
location: complement(join(92364..92474,93159..93236,93393..93501,93883..93981,94864..95018))
location: region:92364-95018:-1
so has part: feature:94864-95018:-1:exon
so has part: feature:93883-93981:-1:exon
so has part: feature:93393-93501:-1:exon
so has part: feature:93159-93236:-1:exon
so has part: feature:92364-92474:-1:exon

XP_041576923.1
type: Protein
SIO_000068: ncbiprotein

position:92364:-1
position: 92364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:94864-95018:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:93883-93981:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:93393-93501:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:93159-93236:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:92364-92474:-1:exon

LOC100190115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC100190115
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative signal sequence receptor beta variant 2 isoform X1
translation: MKLPLLAVFALVSVARCEDGARLLASKSLLNRYAVEGKDLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPLKAGYFNFTSATITYVAQEGAPVVAGFTSAPGQGGILAQRDFDRRFSPHFLDWAAFGVMTLPSIGIPLLLWYSSKRKYDTPKSKKN
SIO_010081: LOC100190115
subclass of: SO_0000673
so part of: LOC100190115
location: complement(join(92364..92474,93159..93236,93393..93501,93883..93981,94864..95018))
location: region:92364-95018:-1
so has part: feature:94864-95018:-1:exon
so has part: feature:93883-93981:-1:exon
so has part: feature:93393-93501:-1:exon
so has part: feature:93159-93236:-1:exon
so has part: feature:92364-92474:-1:exon

XP_030147001.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:94864-95018:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:93883-93981:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:93393-93501:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:93159-93236:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:92364-92474:-1:exon

LOC100190115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC100190115
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative signal sequence receptor beta variant 2 isoform X1
translation: MKLPLLAVFALVSVARCEDGARLLASKSLLNRYAVEGKDLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPLKAGYFNFTSATITYVAQEGAPVVAGFTSAPGQGGILAQRDFDRRFSPHFLDWAAFGVMTLPSIGIPLLLWYSSKRKYDTPKSKKN
SIO_010081: LOC100190115
subclass of: SO_0000673
so part of: LOC100190115
location: complement(join(92364..92474,93159..93236,93393..93501,93883..93981,94864..95018))
location: region:92364-95018:-1
so has part: feature:94864-95018:-1:exon
so has part: feature:93883-93981:-1:exon
so has part: feature:93393-93501:-1:exon
so has part: feature:93159-93236:-1:exon
so has part: feature:92364-92474:-1:exon

XP_030146998.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:94864-95018:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:93883-93981:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:93393-93501:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:93159-93236:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:92364-92474:-1:exon

LOC100190115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC100190115
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative signal sequence receptor beta variant 2 isoform X1
translation: MKLPLLAVFALVSVARCEDGARLLASKSLLNRYAVEGKDLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPLKAGYFNFTSATITYVAQEGAPVVAGFTSAPGQGGILAQRDFDRRFSPHFLDWAAFGVMTLPSIGIPLLLWYSSKRKYDTPKSKKN
SIO_010081: LOC100190115
subclass of: SO_0000673
so part of: LOC100190115
location: complement(join(92364..92474,93159..93236,93393..93501,93883..93981,94864..95018))
location: region:92364-95018:-1
so has part: feature:94864-95018:-1:exon
so has part: feature:93883-93981:-1:exon
so has part: feature:93393-93501:-1:exon
so has part: feature:93159-93236:-1:exon
so has part: feature:92364-92474:-1:exon

XP_030147000.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:94864-95018:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:93883-93981:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:93393-93501:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:93159-93236:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:92364-92474:-1:exon

LOC100190115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC100190115
inference: similar to AA sequence (same species):RefSeq:NP_001232510.1
exception: annotated by transcript or proteomic data
note: The RefSeq protein has 1 substitution compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: putative signal sequence receptor beta variant 2 precursor
translation: MKLPLLAVFALVSVARCEDGARLLASKSLLNRYAVEGKDLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPLKAGYFNFTSATITYLAQEGAPVVAGFTSAPGQGGILAQRDFDRRFSPHFLDWAAFGVMTLPSIGIPLLLWYSSKRKYDTPKSKKN
SIO_010081: LOC100190115
subclass of: SO_0000673
so part of: LOC100190115
location: complement(join(92364..92474,93159..93236,93393..93501,93883..93981,94864..95018))
location: region:92364-95018:-1
so has part: feature:94864-95018:-1:exon
so has part: feature:93883-93981:-1:exon
so has part: feature:93393-93501:-1:exon
so has part: feature:93159-93236:-1:exon
so has part: feature:92364-92474:-1:exon

NP_001232510.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:94864-95018:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:93883-93981:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:93393-93501:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:93159-93236:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:92364-92474:-1:exon

LOC100190115
type: Signal Peptide
subclass of: SO_0000418
RO_0002162: 59729
gene: LOC100190115
inference: COORDINATES: ab initio prediction:SignalP:4.0
SIO_010081: LOC100190115
subclass of: SO_0000673
so part of: LOC100190115
location: complement(94968..95018)
location: region:94968-95018:-1
so has part: feature:94968-95018:-1:exon

position:94968:-1
position: 94968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:94968-95018:-1:exon

LOC116806633
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC116806633
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 97799..110435
location: region:97799-110435:1
so has part: feature:97799-110435:1:exon

116806633
type: Gene
SIO_000068: ncbigene

position:97799:1
position: 97799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:110435:1
position: 110435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:97799-110435:1:exon

LOC116806633
type: Exon
subclass of: SO_0000147
RO_0002162: 59729
gene: LOC116806633
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC116806633
subclass of: SO_0000673
so part of: LOC116806633
location: 97799..97921
location: region:97799-97921:1
so has part: feature:97799-97921:1:exon

position:97921:1
position: 97921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:97799-97921:1:exon

LOC116806633
type: Exon
subclass of: SO_0000147
RO_0002162: 59729
gene: LOC116806633
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC116806633
subclass of: SO_0000673
so part of: LOC116806633
location: 98056..98131
location: region:98056-98131:1
so has part: feature:98056-98131:1:exon

position:98056:1
position: 98056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:98131:1
position: 98131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:98056-98131:1:exon

LOC116806633
type: Exon
subclass of: SO_0000147
RO_0002162: 59729
gene: LOC116806633
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC116806633
subclass of: SO_0000673
so part of: LOC116806633
location: 98812..100527
location: region:98812-100527:1
so has part: feature:98812-100527:1:exon

position:98812:1
position: 98812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:100527:1
position: 100527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:98812-100527:1:exon

LOC116806633
type: Exon
subclass of: SO_0000147
RO_0002162: 59729
gene: LOC116806633
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC116806633
subclass of: SO_0000673
so part of: LOC116806633
location: 108614..109495
location: region:108614-109495:1
so has part: feature:108614-109495:1:exon

position:108614:1
position: 108614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:109495:1
position: 109495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:108614-109495:1:exon

LOC116806633
type: Exon
subclass of: SO_0000147
RO_0002162: 59729
gene: LOC116806633
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC116806633
subclass of: SO_0000673
so part of: LOC116806633
location: 109934..110142
location: region:109934-110142:1
so has part: feature:109934-110142:1:exon

position:109934:1
position: 109934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:110142:1
position: 110142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:109934-110142:1:exon

LOC116806633
type: Exon
subclass of: SO_0000147
RO_0002162: 59729
gene: LOC116806633
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC116806633
subclass of: SO_0000673
so part of: LOC116806633
location: 110229..110435
location: region:110229-110435:1
so has part: feature:110229-110435:1:exon

position:110229:1
position: 110229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:110229-110435:1:exon

ZBTB7B
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: ZBTB7B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(110848..123510)
location: region:110848-123510:-1
so has part: feature:110848-123510:-1:exon
subclass of: SO_0000010

115498529
type: Gene
SIO_000068: ncbigene

position:110848:-1
position: 110848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:123510:-1
position: 123510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:110848-123510:-1:exon

ZBTB7B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: ZBTB7B
product: zinc finger and BTB domain containing 7B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_030291704.3
SIO_010081: ZBTB7B
subclass of: SO_0000673
so part of: ZBTB7B
location: complement(join(110848..112274,113039..114042,123431..123510))
location: region:110848-123510:-1
so has part: feature:123431-123510:-1:exon
so has part: feature:113039-114042:-1:exon
so has part: feature:110848-112274:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:123431-123510:-1:exon

position:123431:-1
position: 123431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:113039-114042:-1:exon

position:113039:-1
position: 113039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:114042:-1
position: 114042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:110848-112274:-1:exon

position:112274:-1
position: 112274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZBTB7B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: ZBTB7B
product: zinc finger and BTB domain containing 7B, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_030291705.3
SIO_010081: ZBTB7B
subclass of: SO_0000673
so part of: ZBTB7B
location: complement(join(110848..112274,113039..114042,123308..123424))
location: region:110848-123424:-1
so has part: feature:123308-123424:-1:exon
so has part: feature:113039-114042:-1:exon
so has part: feature:110848-112274:-1:exon

position:123424:-1
position: 123424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:123308-123424:-1:exon

position:123308:-1
position: 123308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:113039-114042:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:110848-112274:-1:exon

ZBTB7B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: ZBTB7B
product: zinc finger and BTB domain containing 7B, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_030291706.3
SIO_010081: ZBTB7B
subclass of: SO_0000673
so part of: ZBTB7B
location: complement(join(110848..112274,113039..114042,118142..118440))
location: region:110848-118440:-1
so has part: feature:118142-118440:-1:exon
so has part: feature:113039-114042:-1:exon
so has part: feature:110848-112274:-1:exon

position:118440:-1
position: 118440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:118142-118440:-1:exon

position:118142:-1
position: 118142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:113039-114042:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:110848-112274:-1:exon

ZBTB7B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: ZBTB7B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger and BTB domain-containing protein 7B
translation: MASPEDDLIGIPFPEHSSELLSCLNEQRQLGLLCDVTIKTQGLEYRTHRAVLAASSRYFKKLFAGPGPGQEVCELDFVGPEALGALLEFAYTATLTISSANMGEVLRAARLLEIPCVIAACVEILQGSGLEAPGPDDGDCERARRYLEAFSTLPEGEVPAPPPPRPTPRRSKKTRKFLQARGAQLNNHAEEPPAEAEGSGSPPPPSQLPSPPLPEGLSLPYDSFELPEEEELPPHPFPFPYQPPLSPEEAASDDDAIDPDLMAYLGSLHHESLAPGLDSPDKLVRKRRSQMPQECPVCHKVIHGAGKLPRHMRTHTGEKPFACQVCGVRFTRNDKLKIHMRKHTGERPYSCQHCSARFLHSYDLKNHMHLHTGARPYECYLCHKAFAKDDHLQRHLKGQNCLEVRTRRRRRDEPPPPPAGPPGLDLSNGRLEGLRLSIARYWAPGQPEEEEEEPEGEEGPQPDGTVPVEMA
SIO_010081: ZBTB7B
subclass of: SO_0000673
so part of: ZBTB7B
location: complement(join(111854..112274,113039..114033))
location: region:111854-114033:-1
so has part: feature:113039-114033:-1:exon
so has part: feature:111854-112274:-1:exon

XP_030147564.1
type: Protein
SIO_000068: ncbiprotein

position:111854:-1
position: 111854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:114033:-1
position: 114033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:113039-114033:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:111854-112274:-1:exon

ZBTB7B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: ZBTB7B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger and BTB domain-containing protein 7B
translation: MASPEDDLIGIPFPEHSSELLSCLNEQRQLGLLCDVTIKTQGLEYRTHRAVLAASSRYFKKLFAGPGPGQEVCELDFVGPEALGALLEFAYTATLTISSANMGEVLRAARLLEIPCVIAACVEILQGSGLEAPGPDDGDCERARRYLEAFSTLPEGEVPAPPPPRPTPRRSKKTRKFLQARGAQLNNHAEEPPAEAEGSGSPPPPSQLPSPPLPEGLSLPYDSFELPEEEELPPHPFPFPYQPPLSPEEAASDDDAIDPDLMAYLGSLHHESLAPGLDSPDKLVRKRRSQMPQECPVCHKVIHGAGKLPRHMRTHTGEKPFACQVCGVRFTRNDKLKIHMRKHTGERPYSCQHCSARFLHSYDLKNHMHLHTGARPYECYLCHKAFAKDDHLQRHLKGQNCLEVRTRRRRRDEPPPPPAGPPGLDLSNGRLEGLRLSIARYWAPGQPEEEEEEPEGEEGPQPDGTVPVEMA
SIO_010081: ZBTB7B
subclass of: SO_0000673
so part of: ZBTB7B
location: complement(join(111854..112274,113039..114033))
location: region:111854-114033:-1
so has part: feature:113039-114033:-1:exon
so has part: feature:111854-112274:-1:exon

XP_030147565.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:113039-114033:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:111854-112274:-1:exon

ZBTB7B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: ZBTB7B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger and BTB domain-containing protein 7B
translation: MASPEDDLIGIPFPEHSSELLSCLNEQRQLGLLCDVTIKTQGLEYRTHRAVLAASSRYFKKLFAGPGPGQEVCELDFVGPEALGALLEFAYTATLTISSANMGEVLRAARLLEIPCVIAACVEILQGSGLEAPGPDDGDCERARRYLEAFSTLPEGEVPAPPPPRPTPRRSKKTRKFLQARGAQLNNHAEEPPAEAEGSGSPPPPSQLPSPPLPEGLSLPYDSFELPEEEELPPHPFPFPYQPPLSPEEAASDDDAIDPDLMAYLGSLHHESLAPGLDSPDKLVRKRRSQMPQECPVCHKVIHGAGKLPRHMRTHTGEKPFACQVCGVRFTRNDKLKIHMRKHTGERPYSCQHCSARFLHSYDLKNHMHLHTGARPYECYLCHKAFAKDDHLQRHLKGQNCLEVRTRRRRRDEPPPPPAGPPGLDLSNGRLEGLRLSIARYWAPGQPEEEEEEPEGEEGPQPDGTVPVEMA
SIO_010081: ZBTB7B
subclass of: SO_0000673
so part of: ZBTB7B
location: complement(join(111854..112274,113039..114033))
location: region:111854-114033:-1
so has part: feature:113039-114033:-1:exon
so has part: feature:111854-112274:-1:exon

XP_030147566.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:113039-114033:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:111854-112274:-1:exon

LOC105758838
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC105758838
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(124965..128387)
location: region:124965-128387:-1
so has part: feature:124965-128387:-1:exon
subclass of: SO_0000010

105758838
type: Gene
SIO_000068: ncbigene

position:124965:-1
position: 124965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:128387:-1
position: 128387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:124965-128387:-1:exon

LOC105758838
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC105758838
product: mothers against decapentaplegic homolog 6, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 56 samples with support for all annotated introns
transcript id: XM_030291429.3
SIO_010081: LOC105758838
subclass of: SO_0000673
so part of: LOC105758838
location: complement(join(124965..126268,126896..126979,127125..127538,127896..128387))
location: region:124965-128387:-1
so has part: feature:127896-128387:-1:exon
so has part: feature:127125-127538:-1:exon
so has part: feature:126896-126979:-1:exon
so has part: feature:124965-126268:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:127896-128387:-1:exon

position:127896:-1
position: 127896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:127125-127538:-1:exon

position:127125:-1
position: 127125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:127538:-1
position: 127538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:126896-126979:-1:exon

position:126896:-1
position: 126896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:126979:-1
position: 126979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:124965-126268:-1:exon

position:126268:-1
position: 126268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105758838
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC105758838
product: mothers against decapentaplegic homolog 6, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 4 long SRA reads, 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 72 samples with support for all annotated introns
transcript id: XM_012570833.4
SIO_010081: LOC105758838
subclass of: SO_0000673
so part of: LOC105758838
location: complement(join(124965..126268,126881..126979,127125..127538,127896..128386))
location: region:124965-128386:-1
so has part: feature:127896-128386:-1:exon
so has part: feature:127125-127538:-1:exon
so has part: feature:126881-126979:-1:exon
so has part: feature:124965-126268:-1:exon

position:128386:-1
position: 128386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:127896-128386:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:127125-127538:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:126881-126979:-1:exon

position:126881:-1
position: 126881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:124965-126268:-1:exon

LOC105758838
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC105758838
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mothers against decapentaplegic homolog 6 isoform X2
translation: MFRSRRAGLVRRLWRQRCAAASAEDGPSALKPAVHALFKKLKDEELELLVQVVESRGAWESGCVLAPRGDPRGVKQGLPPQVLLCRLFRWPDLHQSHELKHLCYCTGGQGACGDLAVLCCNPHHFSRLAVPETPPPPYLKASWGSSWPDETQLMEFSYNDTSLSWSTIQDGCWCKLAYWEYRTRVGRLYAVHEASVNVFCELPRGSGFCLAQLPAAYRSCAVRRARGKIGRGLLLSQEPGGVWAYNRSEHPIFVSSPTLSPPGACRLTVLKVLPGYSAKVFDYERAGDRGGWQLPGEGPCDPHSIRISFAKGWGPCYSRQFITSCPCWLEVLLNQPR
SIO_010081: LOC105758838
subclass of: SO_0000673
so part of: LOC105758838
location: complement(join(125733..126268,126896..126979,127125..127518))
location: region:125733-127518:-1
so has part: feature:127125-127518:-1:exon
so has part: feature:126896-126979:-1:exon
so has part: feature:125733-126268:-1:exon

XP_030147289.3
type: Protein
SIO_000068: ncbiprotein

position:125733:-1
position: 125733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:127518:-1
position: 127518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:127125-127518:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:126896-126979:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:125733-126268:-1:exon

LOC105758838
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC105758838
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mothers against decapentaplegic homolog 6 isoform X1
translation: MFRSRRAGLVRRLWRQRCAAASAEDGPSALKPAVHALFKKLKDEELELLVQVVESRGAWESGCVLAPRGDPRGVKQGLPPQVLLCRLFRWPDLHQSHELKHLCYCTGGQGACGDLAVLCCNPHHFSRLAVPETPPPPYLKASWGSSWPDETQLMEFSYNGGDWCDTSLSWSTIQDGCWCKLAYWEYRTRVGRLYAVHEASVNVFCELPRGSGFCLAQLPAAYRSCAVRRARGKIGRGLLLSQEPGGVWAYNRSEHPIFVSSPTLSPPGACRLTVLKVLPGYSAKVFDYERAGDRGGWQLPGEGPCDPHSIRISFAKGWGPCYSRQFITSCPCWLEVLLNQPR
SIO_010081: LOC105758838
subclass of: SO_0000673
so part of: LOC105758838
location: complement(join(125733..126268,126881..126979,127125..127518))
location: region:125733-127518:-1
so has part: feature:127125-127518:-1:exon
so has part: feature:126881-126979:-1:exon
so has part: feature:125733-126268:-1:exon

XP_012426287.4
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:127125-127518:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:126881-126979:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:125733-126268:-1:exon

FLAD1
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: FLAD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(128984..132887)
location: region:128984-132887:-1
so has part: feature:128984-132887:-1:exon
subclass of: SO_0000010

100226988
type: Gene
SIO_000068: ncbigene

position:128984:-1
position: 128984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:132887:-1
position: 132887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:128984-132887:-1:exon

FLAD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: FLAD1
product: flavin adenine dinucleotide synthetase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 137 samples with support for all annotated introns
transcript id: XM_041721080.1
SIO_010081: FLAD1
subclass of: SO_0000673
so part of: FLAD1
location: complement(join(128984..130019,130101..130174,130542..130731,130962..131060,131254..131401,131852..132611,132712..132887))
location: region:128984-132887:-1
so has part: feature:132712-132887:-1:exon
so has part: feature:131852-132611:-1:exon
so has part: feature:131254-131401:-1:exon
so has part: feature:130962-131060:-1:exon
so has part: feature:130542-130731:-1:exon
so has part: feature:130101-130174:-1:exon
so has part: feature:128984-130019:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:132712-132887:-1:exon

position:132712:-1
position: 132712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:131852-132611:-1:exon

position:131852:-1
position: 131852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:132611:-1
position: 132611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:131254-131401:-1:exon

position:131254:-1
position: 131254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:131401:-1
position: 131401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:130962-131060:-1:exon

position:130962:-1
position: 130962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:131060:-1
position: 131060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:130542-130731:-1:exon

position:130542:-1
position: 130542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:130731:-1
position: 130731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:130101-130174:-1:exon

position:130101:-1
position: 130101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:130174:-1
position: 130174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:128984-130019:-1:exon

position:130019:-1
position: 130019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FLAD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: FLAD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FAD synthase
translation: MWRVLRAAGRVRGPLRAAAWRPMAASGPAAAARGSASTAGIIVIGDEILKGYTQDTNSFFMCRRLRALGVSVARISVVPDDVEAIASEVAAFAARFTYVLTSGGIGPTHDDVTFEAVAKAFGERVVLHPELVALVREFFGKTEVQCPEMKLARVPESSRLNYGTDGHTGSTFKYPLVSVHNVYIFPGIPALMERALDGLAHLFRSKRTHFHSRTIYVLSDEMVITPLLDRADATFRGRVSLGSYPDWTSNYYRVKLTLDSESEQDLEEAYCFLMRELPAGVVVPLVTDCVSPAAVEVYGLAESGSALGQKVAAALRTIEEALDRYSLVQLCVGFNGGKDCTALLHLVHAAVQRRFPARQERLQVLYIRIVSPFPEMEQFIQTTVQRYGVQLCTVEGSIREALAQLKEQQPQLEAVLMGTRRTDPYSRTLTPMCVTDPSWPPYMRVNPLLDWSYRDIWEFLRKLFVPYCILYDKGYTSLGSMTNTQKNPALCYTDAQGRESYRPAYELENEEEERTSRQ
SIO_010081: FLAD1
subclass of: SO_0000673
so part of: FLAD1
location: complement(join(129884..130019,130101..130174,130542..130731,130962..131060,131254..131401,131852..132611,132712..132861))
location: region:129884-132861:-1
so has part: feature:132712-132861:-1:exon
so has part: feature:131852-132611:-1:exon
so has part: feature:131254-131401:-1:exon
so has part: feature:130962-131060:-1:exon
so has part: feature:130542-130731:-1:exon
so has part: feature:130101-130174:-1:exon
so has part: feature:129884-130019:-1:exon

XP_041577014.1
type: Protein
SIO_000068: ncbiprotein

position:129884:-1
position: 129884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:132861:-1
position: 132861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:132712-132861:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:131852-132611:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:131254-131401:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:130962-131060:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:130542-130731:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:130101-130174:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:129884-130019:-1:exon

CKS1B
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: CKS1B
note: CDC28 protein kinase regulatory subunit 1B; Derived by automated computational analysis using gene prediction method: BestRefSeq,Gnomon.
so part of: sequence
location: complement(133200..134104)
location: region:133200-134104:-1
so has part: feature:133200-134104:-1:exon
subclass of: SO_0000010

100134846
type: Gene
SIO_000068: ncbigene

position:133200:-1
position: 133200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:134104:-1
position: 134104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133200-134104:-1:exon

CKS1B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: CKS1B
product: CDC28 protein kinase regulatory subunit 1B
inference: similar to RNA sequence, mRNA (same species):RefSeq:NM_001112807.1
exception: annotated by transcript or proteomic data
note: The RefSeq transcript has 3 substitutions, 2 non-frameshifting indels compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001112807.1
SIO_010081: CKS1B
subclass of: SO_0000673
so part of: CKS1B
location: complement(join(133200..133464,133531..133658,133975..134057))
location: region:133200-134057:-1
so has part: feature:133975-134057:-1:exon
so has part: feature:133531-133658:-1:exon
so has part: feature:133200-133464:-1:exon

position:134057:-1
position: 134057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133975-134057:-1:exon

position:133975:-1
position: 133975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:133531-133658:-1:exon

position:133531:-1
position: 133531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:133658:-1
position: 133658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:133200-133464:-1:exon

position:133464:-1
position: 133464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CKS1B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: CKS1B
product: CDC28 protein kinase regulatory subunit 1B, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 long SRA read, 1 Protein, and 90% coverage of the annotated genomic feature by RNAseq alignments, including 164 samples with support for all annotated introns
transcript id: XM_030291133.3
SIO_010081: CKS1B
subclass of: SO_0000673
so part of: CKS1B
location: complement(join(133216..133658,133975..134104))
location: region:133216-134104:-1
so has part: feature:133975-134104:-1:exon
so has part: feature:133216-133658:-1:exon

position:133216:-1
position: 133216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133975-134104:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:133216-133658:-1:exon

CKS1B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: CKS1B
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: cyclin-dependent kinases regulatory subunit 1
translation: MAHKQIYYSDKYDDEEFEYRHVMLPKDIAKLVPKTHLLSESEWRNLGVQQSQGWVHYMIHEPEPHILLFRRPLPKKPEK
SIO_010081: CKS1B
subclass of: SO_0000673
so part of: CKS1B
location: complement(join(133412..133464,133531..133658,133975..134033))
location: region:133412-134033:-1
so has part: feature:133975-134033:-1:exon
so has part: feature:133531-133658:-1:exon
so has part: feature:133412-133464:-1:exon

NP_001106278.1
type: Protein
SIO_000068: ncbiprotein

position:133412:-1
position: 133412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:134033:-1
position: 134033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133975-134033:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:133531-133658:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:133412-133464:-1:exon

CKS1B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: CKS1B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclin-dependent kinases regulatory subunit 1 isoform X1
translation: MAHKQIYYSDKYDDEEFEYRHVMLPKDIAKLVPKTHLLSESEWRNLGVQQSQGWVHYMIHEPGERRGAAGGAHGARPDPLFCPAEPHILLFRRPLPKKPEK
SIO_010081: CKS1B
subclass of: SO_0000673
so part of: CKS1B
location: complement(join(133412..133658,133975..134033))
location: region:133412-134033:-1
so has part: feature:133975-134033:-1:exon
so has part: feature:133412-133658:-1:exon

XP_030146993.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:133975-134033:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:133412-133658:-1:exon

SHC1
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: SHC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 134234..144231
location: region:134234-144231:1
so has part: feature:134234-144231:1:exon
subclass of: SO_0000010

100229782
type: Gene
SIO_000068: ncbigene

position:134234:1
position: 134234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:144231:1
position: 144231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:134234-144231:1:exon

SHC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: SHC1
product: SHC adaptor protein 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 1 long SRA read, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_030291182.3
SIO_010081: SHC1
subclass of: SO_0000673
so part of: SHC1
location: join(134234..134271,139786..139947,140169..140239,140557..140620,140878..140997,141402..141455,141561..141612,141795..141921,142019..142187,142379..142439,142547..142714,142797..143059,143324..144231)
location: region:134234-144231:1
so has part: feature:134234-134271:1:exon
so has part: feature:139786-139947:1:exon
so has part: feature:140169-140239:1:exon
so has part: feature:140557-140620:1:exon
so has part: feature:140878-140997:1:exon
so has part: feature:141402-141455:1:exon
so has part: feature:141561-141612:1:exon
so has part: feature:141795-141921:1:exon
so has part: feature:142019-142187:1:exon
so has part: feature:142379-142439:1:exon
so has part: feature:142547-142714:1:exon
so has part: feature:142797-143059:1:exon
so has part: feature:143324-144231:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:134234-134271:1:exon

position:134271:1
position: 134271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:139786-139947:1:exon

position:139786:1
position: 139786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:139947:1
position: 139947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:140169-140239:1:exon

position:140169:1
position: 140169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:140239:1
position: 140239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:140557-140620:1:exon

position:140557:1
position: 140557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:140620:1
position: 140620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:140878-140997:1:exon

position:140878:1
position: 140878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:140997:1
position: 140997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:141402-141455:1:exon

position:141402:1
position: 141402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:141455:1
position: 141455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:141561-141612:1:exon

position:141561:1
position: 141561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:141612:1
position: 141612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:141795-141921:1:exon

position:141795:1
position: 141795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:141921:1
position: 141921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:142019-142187:1:exon

position:142019:1
position: 142019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:142187:1
position: 142187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:142379-142439:1:exon

position:142379:1
position: 142379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:142439:1
position: 142439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:142547-142714:1:exon

position:142547:1
position: 142547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:142714:1
position: 142714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:142797-143059:1:exon

position:142797:1
position: 142797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:143059:1
position: 143059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:143324-144231:1:exon

position:143324:1
position: 143324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SHC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: SHC1
product: SHC adaptor protein 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 1 long SRA read, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 61 samples with support for all annotated introns
transcript id: XM_030291184.3
SIO_010081: SHC1
subclass of: SO_0000673
so part of: SHC1
location: join(134265..134356,139786..139947,140169..140239,140557..140620,140878..140997,141402..141455,141561..141612,141795..141921,142019..142187,142379..142439,142547..142714,142797..143059,143324..144231)
location: region:134265-144231:1
so has part: feature:134265-134356:1:exon
so has part: feature:139786-139947:1:exon
so has part: feature:140169-140239:1:exon
so has part: feature:140557-140620:1:exon
so has part: feature:140878-140997:1:exon
so has part: feature:141402-141455:1:exon
so has part: feature:141561-141612:1:exon
so has part: feature:141795-141921:1:exon
so has part: feature:142019-142187:1:exon
so has part: feature:142379-142439:1:exon
so has part: feature:142547-142714:1:exon
so has part: feature:142797-143059:1:exon
so has part: feature:143324-144231:1:exon

position:134265:1
position: 134265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:134265-134356:1:exon

position:134356:1
position: 134356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:139786-139947:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:140169-140239:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:140557-140620:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:140878-140997:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:141402-141455:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:141561-141612:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:141795-141921:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:142019-142187:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:142379-142439:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:142547-142714:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:142797-143059:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:143324-144231:1:exon

SHC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: SHC1
product: SHC adaptor protein 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 1 long SRA read, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_030291185.3
SIO_010081: SHC1
subclass of: SO_0000673
so part of: SHC1
location: join(134738..134825,139786..139947,140169..140239,140557..140620,140878..140997,141402..141455,141561..141612,141795..141921,142019..142187,142379..142439,142547..142714,142797..143059,143324..144231)
location: region:134738-144231:1
so has part: feature:134738-134825:1:exon
so has part: feature:139786-139947:1:exon
so has part: feature:140169-140239:1:exon
so has part: feature:140557-140620:1:exon
so has part: feature:140878-140997:1:exon
so has part: feature:141402-141455:1:exon
so has part: feature:141561-141612:1:exon
so has part: feature:141795-141921:1:exon
so has part: feature:142019-142187:1:exon
so has part: feature:142379-142439:1:exon
so has part: feature:142547-142714:1:exon
so has part: feature:142797-143059:1:exon
so has part: feature:143324-144231:1:exon

position:134738:1
position: 134738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:134738-134825:1:exon

position:134825:1
position: 134825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:139786-139947:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:140169-140239:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:140557-140620:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:140878-140997:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:141402-141455:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:141561-141612:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:141795-141921:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:142019-142187:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:142379-142439:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:142547-142714:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:142797-143059:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:143324-144231:1:exon

SHC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: SHC1
product: SHC adaptor protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 1 long SRA read, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 98 samples with support for all annotated introns
transcript id: XM_012570836.4
SIO_010081: SHC1
subclass of: SO_0000673
so part of: SHC1
location: join(134934..139947,140169..140239,140557..140620,140878..140997,141402..141455,141561..141612,141795..141921,142019..142187,142379..142439,142547..142714,142797..143059,143324..144231)
location: region:134934-144231:1
so has part: feature:134934-139947:1:exon
so has part: feature:140169-140239:1:exon
so has part: feature:140557-140620:1:exon
so has part: feature:140878-140997:1:exon
so has part: feature:141402-141455:1:exon
so has part: feature:141561-141612:1:exon
so has part: feature:141795-141921:1:exon
so has part: feature:142019-142187:1:exon
so has part: feature:142379-142439:1:exon
so has part: feature:142547-142714:1:exon
so has part: feature:142797-143059:1:exon
so has part: feature:143324-144231:1:exon

position:134934:1
position: 134934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:134934-139947:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:140169-140239:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:140557-140620:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:140878-140997:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:141402-141455:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:141561-141612:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:141795-141921:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:142019-142187:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:142379-142439:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:142547-142714:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:142797-143059:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:143324-144231:1:exon

SHC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: SHC1
product: SHC adaptor protein 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 1 long SRA read, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_030291183.3
SIO_010081: SHC1
subclass of: SO_0000673
so part of: SHC1
location: join(134934..136313,139786..139947,140169..140239,140557..140620,140878..140997,141402..141455,141561..141612,141795..141921,142019..142187,142379..142439,142547..142714,142797..143059,143324..144231)
location: region:134934-144231:1
so has part: feature:134934-136313:1:exon
so has part: feature:139786-139947:1:exon
so has part: feature:140169-140239:1:exon
so has part: feature:140557-140620:1:exon
so has part: feature:140878-140997:1:exon
so has part: feature:141402-141455:1:exon
so has part: feature:141561-141612:1:exon
so has part: feature:141795-141921:1:exon
so has part: feature:142019-142187:1:exon
so has part: feature:142379-142439:1:exon
so has part: feature:142547-142714:1:exon
so has part: feature:142797-143059:1:exon
so has part: feature:143324-144231:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:134934-136313:1:exon

position:136313:1
position: 136313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:139786-139947:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:140169-140239:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:140557-140620:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:140878-140997:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:141402-141455:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:141561-141612:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:141795-141921:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:142019-142187:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:142379-142439:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:142547-142714:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:142797-143059:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:143324-144231:1:exon

SHC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: SHC1
product: SHC adaptor protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 99 samples with support for all annotated introns
transcript id: XM_030291181.3
SIO_010081: SHC1
subclass of: SO_0000673
so part of: SHC1
location: join(134934..139947,140169..140239,140557..140620,140878..140997,141402..141455,141561..141612,141795..141921,142019..142187,142379..142439,142550..142714,142797..143059,143324..144006)
location: region:134934-144006:1
so has part: feature:134934-139947:1:exon
so has part: feature:140169-140239:1:exon
so has part: feature:140557-140620:1:exon
so has part: feature:140878-140997:1:exon
so has part: feature:141402-141455:1:exon
so has part: feature:141561-141612:1:exon
so has part: feature:141795-141921:1:exon
so has part: feature:142019-142187:1:exon
so has part: feature:142379-142439:1:exon
so has part: feature:142550-142714:1:exon
so has part: feature:142797-143059:1:exon
so has part: feature:143324-144006:1:exon

position:144006:1
position: 144006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:134934-139947:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:140169-140239:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:140557-140620:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:140878-140997:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:141402-141455:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:141561-141612:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:141795-141921:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:142019-142187:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:142379-142439:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:142550-142714:1:exon

position:142550:1
position: 142550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:142797-143059:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:143324-144006:1:exon

SHC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: SHC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SHC-transforming protein 1 isoform X4
translation: MEYVDMNKLSCGKKTRVEGGQLGGDEWTRHGSFVNKPTRGWLHPDDKVMGSGVSYHVRYMGCVEVLQSMRALDFNTRTQVTREAIGLVCEAVPGAKGAVRRRKPCSRSLNSILGKSNLKFAGMPITLTISTSSLNLMASDCKQIIANHHMQSISFASGGDPDTAEYVAYVAKDPVNQRACHILECPEGLAQDVISTIGQAFELRFKQYLKNPPKLVTPHDRMAGFDGSAWDEEEEEPAPDHQYYNDFPGKEPPIGGVVDMRLQDGAAQTPNHLGATLPVGQSCGGEYDPQKQHAPAQAGREKYPAPAGTSGRTDLFDDPSYVNVQNIDKTRQASASGTPATANGSTQRDLFDMKPFEDALRVPPSVPVGLPPAQVVASMEEQLRREPWYHGKMNRKEAEKLLKVNGDFLVRESTTTPGQYVLTGLQGGQPKHLLLVDPEGVVRTKDHRFESVSHLISYHMDNHLPIISAGSEMCLQQPVERRL
SIO_010081: SHC1
subclass of: SO_0000673
so part of: SHC1
location: join(136302..136313,139786..139947,140169..140239,140557..140620,140878..140997,141402..141455,141561..141612,141795..141921,142019..142187,142379..142439,142547..142714,142797..143059,143324..143452)
location: region:136302-143452:1
so has part: feature:136302-136313:1:exon
so has part: feature:139786-139947:1:exon
so has part: feature:140169-140239:1:exon
so has part: feature:140557-140620:1:exon
so has part: feature:140878-140997:1:exon
so has part: feature:141402-141455:1:exon
so has part: feature:141561-141612:1:exon
so has part: feature:141795-141921:1:exon
so has part: feature:142019-142187:1:exon
so has part: feature:142379-142439:1:exon
so has part: feature:142547-142714:1:exon
so has part: feature:142797-143059:1:exon
so has part: feature:143324-143452:1:exon

XP_030147043.1
type: Protein
SIO_000068: ncbiprotein

position:136302:1
position: 136302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:143452:1
position: 143452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:136302-136313:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:139786-139947:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:140169-140239:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:140557-140620:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:140878-140997:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:141402-141455:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:141561-141612:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:141795-141921:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:142019-142187:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:142379-142439:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:142547-142714:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:142797-143059:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:143324-143452:1:exon

SHC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: SHC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SHC-transforming protein 1 isoform X1
translation: MDLLQKSKYSHLRNESVSSPEEAVAGLGVLPSPVESLASMQSLPGSLSSLSHAAPLGELSPELEESPTTLCSFFPKMANLKLSNPANLLSLRGSSASSSPGEPGPPGMAALVPGVAASPGSVRPVTVCSQDMNKLSCGKKTRVEGGQLGGDEWTRHGSFVNKPTRGWLHPDDKVMGSGVSYHVRYMGCVEVLQSMRALDFNTRTQVTREAIGLVCEAVPGAKGAVRRRKPCSRSLNSILGKSNLKFAGMPITLTISTSSLNLMASDCKQIIANHHMQSISFASGGDPDTAEYVAYVAKDPVNQRACHILECPEGLAQDVISTIGQAFELRFKQYLKNPPKLVTPHDRMAGFDGSAWDEEEEEPAPDHQYYNDFPGKEPPIGGVVDMRLQDGAAQTPNHLGATLPVGQSCGGEYDPQKQHAPAQAGREKYPAPAGTSGRTDLFDDPSYVNVQNIDKTRQASASGTPATANGSTQRDLFDMKPFEDALRVPPSVPVGLPPAQVVASMEEQLRREPWYHGKMNRKEAEKLLKVNGDFLVRESTTTPGQYVLTGLQGGQPKHLLLVDPEGVVRTKDHRFESVSHLISYHMDNHLPIISAGSEMCLQQPVERRL
SIO_010081: SHC1
subclass of: SO_0000673
so part of: SHC1
location: join(139396..139947,140169..140239,140557..140620,140878..140997,141402..141455,141561..141612,141795..141921,142019..142187,142379..142439,142547..142714,142797..143059,143324..143452)
location: region:139396-143452:1
so has part: feature:139396-139947:1:exon
so has part: feature:140169-140239:1:exon
so has part: feature:140557-140620:1:exon
so has part: feature:140878-140997:1:exon
so has part: feature:141402-141455:1:exon
so has part: feature:141561-141612:1:exon
so has part: feature:141795-141921:1:exon
so has part: feature:142019-142187:1:exon
so has part: feature:142379-142439:1:exon
so has part: feature:142547-142714:1:exon
so has part: feature:142797-143059:1:exon
so has part: feature:143324-143452:1:exon

XP_012426290.1
type: Protein
SIO_000068: ncbiprotein

position:139396:1
position: 139396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:139396-139947:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:140169-140239:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:140557-140620:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:140878-140997:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:141402-141455:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:141561-141612:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:141795-141921:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:142019-142187:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:142379-142439:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:142547-142714:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:142797-143059:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:143324-143452:1:exon

SHC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: SHC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SHC-transforming protein 1 isoform X2
translation: MDLLQKSKYSHLRNESVSSPEEAVAGLGVLPSPVESLASMQSLPGSLSSLSHAAPLGELSPELEESPTTLCSFFPKMANLKLSNPANLLSLRGSSASSSPGEPGPPGMAALVPGVAASPGSVRPVTVCSQDMNKLSCGKKTRVEGGQLGGDEWTRHGSFVNKPTRGWLHPDDKVMGSGVSYHVRYMGCVEVLQSMRALDFNTRTQVTREAIGLVCEAVPGAKGAVRRRKPCSRSLNSILGKSNLKFAGMPITLTISTSSLNLMASDCKQIIANHHMQSISFASGGDPDTAEYVAYVAKDPVNQRACHILECPEGLAQDVISTIGQAFELRFKQYLKNPPKLVTPHDRMAGFDGSAWDEEEEEPAPDHQYYNDFPGKEPPIGGVVDMRLQDGAAQTPNHLGATLPVGQSCGGEYDPQKQHAPAQGREKYPAPAGTSGRTDLFDDPSYVNVQNIDKTRQASASGTPATANGSTQRDLFDMKPFEDALRVPPSVPVGLPPAQVVASMEEQLRREPWYHGKMNRKEAEKLLKVNGDFLVRESTTTPGQYVLTGLQGGQPKHLLLVDPEGVVRTKDHRFESVSHLISYHMDNHLPIISAGSEMCLQQPVERRL
SIO_010081: SHC1
subclass of: SO_0000673
so part of: SHC1
location: join(139396..139947,140169..140239,140557..140620,140878..140997,141402..141455,141561..141612,141795..141921,142019..142187,142379..142439,142550..142714,142797..143059,143324..143452)
location: region:139396-143452:1
so has part: feature:139396-139947:1:exon
so has part: feature:140169-140239:1:exon
so has part: feature:140557-140620:1:exon
so has part: feature:140878-140997:1:exon
so has part: feature:141402-141455:1:exon
so has part: feature:141561-141612:1:exon
so has part: feature:141795-141921:1:exon
so has part: feature:142019-142187:1:exon
so has part: feature:142379-142439:1:exon
so has part: feature:142550-142714:1:exon
so has part: feature:142797-143059:1:exon
so has part: feature:143324-143452:1:exon

XP_030147041.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:139396-139947:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:140169-140239:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:140557-140620:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:140878-140997:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:141402-141455:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:141561-141612:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:141795-141921:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:142019-142187:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:142379-142439:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:142550-142714:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:142797-143059:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:143324-143452:1:exon

SHC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: SHC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SHC-transforming protein 1 isoform X3
translation: MNKLSCGKKTRVEGGQLGGDEWTRHGSFVNKPTRGWLHPDDKVMGSGVSYHVRYMGCVEVLQSMRALDFNTRTQVTREAIGLVCEAVPGAKGAVRRRKPCSRSLNSILGKSNLKFAGMPITLTISTSSLNLMASDCKQIIANHHMQSISFASGGDPDTAEYVAYVAKDPVNQRACHILECPEGLAQDVISTIGQAFELRFKQYLKNPPKLVTPHDRMAGFDGSAWDEEEEEPAPDHQYYNDFPGKEPPIGGVVDMRLQDGAAQTPNHLGATLPVGQSCGGEYDPQKQHAPAQAGREKYPAPAGTSGRTDLFDDPSYVNVQNIDKTRQASASGTPATANGSTQRDLFDMKPFEDALRVPPSVPVGLPPAQVVASMEEQLRREPWYHGKMNRKEAEKLLKVNGDFLVRESTTTPGQYVLTGLQGGQPKHLLLVDPEGVVRTKDHRFESVSHLISYHMDNHLPIISAGSEMCLQQPVERRL
SIO_010081: SHC1
subclass of: SO_0000673
so part of: SHC1
location: join(139789..139947,140169..140239,140557..140620,140878..140997,141402..141455,141561..141612,141795..141921,142019..142187,142379..142439,142547..142714,142797..143059,143324..143452)
location: region:139789-143452:1
so has part: feature:139789-139947:1:exon
so has part: feature:140169-140239:1:exon
so has part: feature:140557-140620:1:exon
so has part: feature:140878-140997:1:exon
so has part: feature:141402-141455:1:exon
so has part: feature:141561-141612:1:exon
so has part: feature:141795-141921:1:exon
so has part: feature:142019-142187:1:exon
so has part: feature:142379-142439:1:exon
so has part: feature:142547-142714:1:exon
so has part: feature:142797-143059:1:exon
so has part: feature:143324-143452:1:exon

XP_030147042.1
type: Protein
SIO_000068: ncbiprotein

position:139789:1
position: 139789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:139789-139947:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:140169-140239:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:140557-140620:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:140878-140997:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:141402-141455:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:141561-141612:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:141795-141921:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:142019-142187:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:142379-142439:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:142547-142714:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:142797-143059:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:143324-143452:1:exon

SHC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: SHC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SHC-transforming protein 1 isoform X3
translation: MNKLSCGKKTRVEGGQLGGDEWTRHGSFVNKPTRGWLHPDDKVMGSGVSYHVRYMGCVEVLQSMRALDFNTRTQVTREAIGLVCEAVPGAKGAVRRRKPCSRSLNSILGKSNLKFAGMPITLTISTSSLNLMASDCKQIIANHHMQSISFASGGDPDTAEYVAYVAKDPVNQRACHILECPEGLAQDVISTIGQAFELRFKQYLKNPPKLVTPHDRMAGFDGSAWDEEEEEPAPDHQYYNDFPGKEPPIGGVVDMRLQDGAAQTPNHLGATLPVGQSCGGEYDPQKQHAPAQAGREKYPAPAGTSGRTDLFDDPSYVNVQNIDKTRQASASGTPATANGSTQRDLFDMKPFEDALRVPPSVPVGLPPAQVVASMEEQLRREPWYHGKMNRKEAEKLLKVNGDFLVRESTTTPGQYVLTGLQGGQPKHLLLVDPEGVVRTKDHRFESVSHLISYHMDNHLPIISAGSEMCLQQPVERRL
SIO_010081: SHC1
subclass of: SO_0000673
so part of: SHC1
location: join(139789..139947,140169..140239,140557..140620,140878..140997,141402..141455,141561..141612,141795..141921,142019..142187,142379..142439,142547..142714,142797..143059,143324..143452)
location: region:139789-143452:1
so has part: feature:139789-139947:1:exon
so has part: feature:140169-140239:1:exon
so has part: feature:140557-140620:1:exon
so has part: feature:140878-140997:1:exon
so has part: feature:141402-141455:1:exon
so has part: feature:141561-141612:1:exon
so has part: feature:141795-141921:1:exon
so has part: feature:142019-142187:1:exon
so has part: feature:142379-142439:1:exon
so has part: feature:142547-142714:1:exon
so has part: feature:142797-143059:1:exon
so has part: feature:143324-143452:1:exon

XP_030147044.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:139789-139947:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:140169-140239:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:140557-140620:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:140878-140997:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:141402-141455:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:141561-141612:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:141795-141921:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:142019-142187:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:142379-142439:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:142547-142714:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:142797-143059:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:143324-143452:1:exon

SHC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: SHC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SHC-transforming protein 1 isoform X3
translation: MNKLSCGKKTRVEGGQLGGDEWTRHGSFVNKPTRGWLHPDDKVMGSGVSYHVRYMGCVEVLQSMRALDFNTRTQVTREAIGLVCEAVPGAKGAVRRRKPCSRSLNSILGKSNLKFAGMPITLTISTSSLNLMASDCKQIIANHHMQSISFASGGDPDTAEYVAYVAKDPVNQRACHILECPEGLAQDVISTIGQAFELRFKQYLKNPPKLVTPHDRMAGFDGSAWDEEEEEPAPDHQYYNDFPGKEPPIGGVVDMRLQDGAAQTPNHLGATLPVGQSCGGEYDPQKQHAPAQAGREKYPAPAGTSGRTDLFDDPSYVNVQNIDKTRQASASGTPATANGSTQRDLFDMKPFEDALRVPPSVPVGLPPAQVVASMEEQLRREPWYHGKMNRKEAEKLLKVNGDFLVRESTTTPGQYVLTGLQGGQPKHLLLVDPEGVVRTKDHRFESVSHLISYHMDNHLPIISAGSEMCLQQPVERRL
SIO_010081: SHC1
subclass of: SO_0000673
so part of: SHC1
location: join(139789..139947,140169..140239,140557..140620,140878..140997,141402..141455,141561..141612,141795..141921,142019..142187,142379..142439,142547..142714,142797..143059,143324..143452)
location: region:139789-143452:1
so has part: feature:139789-139947:1:exon
so has part: feature:140169-140239:1:exon
so has part: feature:140557-140620:1:exon
so has part: feature:140878-140997:1:exon
so has part: feature:141402-141455:1:exon
so has part: feature:141561-141612:1:exon
so has part: feature:141795-141921:1:exon
so has part: feature:142019-142187:1:exon
so has part: feature:142379-142439:1:exon
so has part: feature:142547-142714:1:exon
so has part: feature:142797-143059:1:exon
so has part: feature:143324-143452:1:exon

XP_030147045.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:139789-139947:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:140169-140239:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:140557-140620:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:140878-140997:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:141402-141455:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:141561-141612:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:141795-141921:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:142019-142187:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:142379-142439:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:142547-142714:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:142797-143059:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:143324-143452:1:exon

PYGO2
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: PYGO2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 144016..146417
location: region:144016-146417:1
so has part: feature:144016-146417:1:exon
subclass of: SO_0000010

115498385
type: Gene
SIO_000068: ncbigene

position:144016:1
position: 144016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:146417:1
position: 146417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:144016-146417:1:exon

PYGO2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: PYGO2
product: pygopus family PHD finger 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 72 samples with support for all annotated introns
transcript id: XM_030291187.3
SIO_010081: PYGO2
subclass of: SO_0000673
so part of: PYGO2
location: join(144016..144646,144735..144784,144860..146417)
location: region:144016-146417:1
so has part: feature:144016-144646:1:exon
so has part: feature:144735-144784:1:exon
so has part: feature:144860-146417:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:144016-144646:1:exon

position:144646:1
position: 144646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:144735-144784:1:exon

position:144735:1
position: 144735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:144784:1
position: 144784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:144860-146417:1:exon

position:144860:1
position: 144860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PYGO2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: PYGO2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pygopus homolog 2
translation: MLVLQDTCHHHVPFLPARPRAILQPRGVGGRTPLHAQCNSPQAKAQPAPRSPRPLPRYTKGTGGCIKVGISLGPGWCELGGVAAGGRFLREGAALRALPSPRTSCVVWPVCPPPSIAPRLVRPDWRVRRESAVIDASRARRPRPPRAVIGPARFRRRSGHGGGARALRAMAAPHAEKLEGAVPAPPAPPGPPHPAGSAAPGGPGRKQGKAGLQMKSPEKKRRKSNTQGPAYSHLSEFAPPPTPMVDHLVASNPFEDDFGAPKVGAAPAPFLGSPVPFGGFRMQGGMSPQVPPGYGGGPQPLRRQPPPFAPGQMGPAFSMPPQNPNYVQPGGLSFAGQPFSQPLGQNFSPPMGQLMQGPVGGFGPMMSPTMGQPPRGDMGPGPALNPPGGPAVAQRFSQPSNLFGQSPMQRPGQNMPPLPPTASPFPGADPSFPASSEEGGKNPPPSTFTQEQHSGSPATVNGAQPGFAPNSAGRSASTPETNSLPLPPPGKASSTSGHQPPPGLVYPCGACRNEVNDDQDAILCEASCQKWFHRECTGMTENAYGLLTTEASAVWACDFCLKTKEIQSVYIREGMGQLVTANDG
SIO_010081: PYGO2
subclass of: SO_0000673
so part of: PYGO2
location: join(144016..144646,144735..144784,144860..145933)
location: region:144016-145933:1
so has part: feature:144016-144646:1:exon
so has part: feature:144735-144784:1:exon
so has part: feature:144860-145933:1:exon

XP_030147047.3
type: Protein
SIO_000068: ncbiprotein

position:145933:1
position: 145933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:144016-144646:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:144735-144784:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:144860-145933:1:exon

PBXIP1
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: PBXIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 146553..150009
location: region:146553-150009:1
so has part: feature:146553-150009:1:exon
subclass of: SO_0000010

100226035
type: Gene
SIO_000068: ncbigene

position:146553:1
position: 146553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:150009:1
position: 150009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:146553-150009:1:exon

PBXIP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: PBXIP1
product: PBX homeobox interacting protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 long SRA read, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 76 samples with support for all annotated introns
transcript id: XM_041721070.1
SIO_010081: PBXIP1
subclass of: SO_0000673
so part of: PBXIP1
location: join(146553..146622,147099..147177,147390..147495,147576..147872,147976..148188,148271..148294,148376..148449,148533..148658,148747..149699,149781..150009)
location: region:146553-150009:1
so has part: feature:146553-146622:1:exon
so has part: feature:147099-147177:1:exon
so has part: feature:147390-147495:1:exon
so has part: feature:147576-147872:1:exon
so has part: feature:147976-148188:1:exon
so has part: feature:148271-148294:1:exon
so has part: feature:148376-148449:1:exon
so has part: feature:148533-148658:1:exon
so has part: feature:148747-149699:1:exon
so has part: feature:149781-150009:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:146553-146622:1:exon

position:146622:1
position: 146622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:147099-147177:1:exon

position:147099:1
position: 147099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:147177:1
position: 147177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:147390-147495:1:exon

position:147390:1
position: 147390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:147495:1
position: 147495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:147576-147872:1:exon

position:147576:1
position: 147576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:147872:1
position: 147872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:147976-148188:1:exon

position:147976:1
position: 147976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:148188:1
position: 148188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:148271-148294:1:exon

position:148271:1
position: 148271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:148294:1
position: 148294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:148376-148449:1:exon

position:148376:1
position: 148376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:148449:1
position: 148449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:148533-148658:1:exon

position:148533:1
position: 148533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:148658:1
position: 148658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:148747-149699:1:exon

position:148747:1
position: 148747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:149699:1
position: 149699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:149781-150009:1:exon

position:149781:1
position: 149781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PBXIP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: PBXIP1
product: PBX homeobox interacting protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 58 samples with support for all annotated introns
transcript id: XM_030291179.3
SIO_010081: PBXIP1
subclass of: SO_0000673
so part of: PBXIP1
location: join(146553..146622,147099..147177,147390..147495,147576..147643,147734..147872,147955..148188,148271..148294,148376..148449,148533..148658,148747..149699,149781..150009)
location: region:146553-150009:1
so has part: feature:146553-146622:1:exon
so has part: feature:147099-147177:1:exon
so has part: feature:147390-147495:1:exon
so has part: feature:147576-147643:1:exon
so has part: feature:147734-147872:1:exon
so has part: feature:147955-148188:1:exon
so has part: feature:148271-148294:1:exon
so has part: feature:148376-148449:1:exon
so has part: feature:148533-148658:1:exon
so has part: feature:148747-149699:1:exon
so has part: feature:149781-150009:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:146553-146622:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:147099-147177:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:147390-147495:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:147576-147643:1:exon

position:147643:1
position: 147643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:147734-147872:1:exon

position:147734:1
position: 147734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:147955-148188:1:exon

position:147955:1
position: 147955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:148271-148294:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:148376-148449:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:148533-148658:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:148747-149699:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:149781-150009:1:exon

PBXIP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: PBXIP1
product: PBX homeobox interacting protein 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 75 samples with support for all annotated introns
transcript id: XM_032752808.2
SIO_010081: PBXIP1
subclass of: SO_0000673
so part of: PBXIP1
location: join(146553..146622,147099..147177,147390..147495,147576..147643,147734..147872,147976..148188,148271..148294,148376..148449,148533..148658,148747..149699,149781..150009)
location: region:146553-150009:1
so has part: feature:146553-146622:1:exon
so has part: feature:147099-147177:1:exon
so has part: feature:147390-147495:1:exon
so has part: feature:147576-147643:1:exon
so has part: feature:147734-147872:1:exon
so has part: feature:147976-148188:1:exon
so has part: feature:148271-148294:1:exon
so has part: feature:148376-148449:1:exon
so has part: feature:148533-148658:1:exon
so has part: feature:148747-149699:1:exon
so has part: feature:149781-150009:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:146553-146622:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:147099-147177:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:147390-147495:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:147576-147643:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:147734-147872:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:147976-148188:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:148271-148294:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:148376-148449:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:148533-148658:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:148747-149699:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:149781-150009:1:exon

PBXIP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: PBXIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pre-B-cell leukemia transcription factor-interacting protein 1 isoform X1
translation: MAEKLDPRDSESSWVLAGSEGLPIDTVGPEQDSASHRSDDEEPQEEDEGTQDTVTAVTTNGATTFPSQTSCPEDSGQGVSQNWGAGGELELVGCSPHRDAPYASACLQDPEECEDSGAGTALDGSAEPSVLEGDEQEELKAEAEPQPCRDTPQAGPTAEDVSCTSSDDNMEGLRWRKGHKPHPEPPTVTPASHRGTPDSGDDGLSMNKYLFGALALVAVGLLIVTGGIYDVADGPVESVGSWDLAAGEQESLLSVDSNDSQQEPPLADAGGSQSVQSMSQLLDKLAKENQEIRLLQAELQAHKEDLRALLHRSEGEAAAAGAQQQSLARENARLRAALEREVTALREAQAELRRLQARREPAAGQPRATAVPGHGKAAPRWHGSLDSLRQELADSLDRARGSGDLKGLVEELSTLEQHLAQVLEAESSGSFSTAWKKPFKVEKESGWHKQHGTRGSPHKQERREHGKPHKKDSQTPREHKPGKSWGKPSHSHPRHDSHEVPWLRRYRAPQGCSGVTDCAHKEGQEVLGAALEPVQKVQFLQLLESFMGQLGLGRQFGKLAPQLDGAFRADGVFAHDRLRFVDFVDDVEDLLEDVAWQEWGNKKAVDGFEEYMLRHYSGASGNVWSQRAPRQHGTRG
SIO_010081: PBXIP1
subclass of: SO_0000673
so part of: PBXIP1
location: join(147118..147177,147390..147495,147576..147872,147976..148188,148271..148294,148376..148449,148533..148658,148747..149699,149781..149838)
location: region:147118-149838:1
so has part: feature:147118-147177:1:exon
so has part: feature:147390-147495:1:exon
so has part: feature:147576-147872:1:exon
so has part: feature:147976-148188:1:exon
so has part: feature:148271-148294:1:exon
so has part: feature:148376-148449:1:exon
so has part: feature:148533-148658:1:exon
so has part: feature:148747-149699:1:exon
so has part: feature:149781-149838:1:exon

XP_041577004.1
type: Protein
SIO_000068: ncbiprotein

position:147118:1
position: 147118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:149838:1
position: 149838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147118-147177:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:147390-147495:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:147576-147872:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:147976-148188:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:148271-148294:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:148376-148449:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:148533-148658:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:148747-149699:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:149781-149838:1:exon

PBXIP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: PBXIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pre-B-cell leukemia transcription factor-interacting protein 1 isoform X2
translation: MAEKLDPRDSESSWVLAGSEGLPIDTVGPEQDSASHRSDDEEPQEEDEGTQDTVTAVTTNGATTFPSQTSCPEDSGQGDPEECEDSGAGTALDGSAEPSVLEGDEQEELKAEAEPQPCRDTPQAGPPHLPLGPTAEDVSCTSSDDNMEGLRWRKGHKPHPEPPTVTPASHRGTPDSGDDGLSMNKYLFGALALVAVGLLIVTGGIYDVADGPVESVGSWDLAAGEQESLLSVDSNDSQQEPPLADAGGSQSVQSMSQLLDKLAKENQEIRLLQAELQAHKEDLRALLHRSEGEAAAAGAQQQSLARENARLRAALEREVTALREAQAELRRLQARREPAAGQPRATAVPGHGKAAPRWHGSLDSLRQELADSLDRARGSGDLKGLVEELSTLEQHLAQVLEAESSGSFSTAWKKPFKVEKESGWHKQHGTRGSPHKQERREHGKPHKKDSQTPREHKPGKSWGKPSHSHPRHDSHEVPWLRRYRAPQGCSGVTDCAHKEGQEVLGAALEPVQKVQFLQLLESFMGQLGLGRQFGKLAPQLDGAFRADGVFAHDRLRFVDFVDDVEDLLEDVAWQEWGNKKAVDGFEEYMLRHYSGASGNVWSQRAPRQHGTRG
SIO_010081: PBXIP1
subclass of: SO_0000673
so part of: PBXIP1
location: join(147118..147177,147390..147495,147576..147643,147734..147872,147955..148188,148271..148294,148376..148449,148533..148658,148747..149699,149781..149838)
location: region:147118-149838:1
so has part: feature:147118-147177:1:exon
so has part: feature:147390-147495:1:exon
so has part: feature:147576-147643:1:exon
so has part: feature:147734-147872:1:exon
so has part: feature:147955-148188:1:exon
so has part: feature:148271-148294:1:exon
so has part: feature:148376-148449:1:exon
so has part: feature:148533-148658:1:exon
so has part: feature:148747-149699:1:exon
so has part: feature:149781-149838:1:exon

XP_030147039.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:147118-147177:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:147390-147495:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:147576-147643:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:147734-147872:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:147955-148188:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:148271-148294:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:148376-148449:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:148533-148658:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:148747-149699:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:149781-149838:1:exon

PBXIP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: PBXIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pre-B-cell leukemia transcription factor-interacting protein 1 isoform X3
translation: MAEKLDPRDSESSWVLAGSEGLPIDTVGPEQDSASHRSDDEEPQEEDEGTQDTVTAVTTNGATTFPSQTSCPEDSGQGDPEECEDSGAGTALDGSAEPSVLEGDEQEELKAEAEPQPCRDTPQAGPTAEDVSCTSSDDNMEGLRWRKGHKPHPEPPTVTPASHRGTPDSGDDGLSMNKYLFGALALVAVGLLIVTGGIYDVADGPVESVGSWDLAAGEQESLLSVDSNDSQQEPPLADAGGSQSVQSMSQLLDKLAKENQEIRLLQAELQAHKEDLRALLHRSEGEAAAAGAQQQSLARENARLRAALEREVTALREAQAELRRLQARREPAAGQPRATAVPGHGKAAPRWHGSLDSLRQELADSLDRARGSGDLKGLVEELSTLEQHLAQVLEAESSGSFSTAWKKPFKVEKESGWHKQHGTRGSPHKQERREHGKPHKKDSQTPREHKPGKSWGKPSHSHPRHDSHEVPWLRRYRAPQGCSGVTDCAHKEGQEVLGAALEPVQKVQFLQLLESFMGQLGLGRQFGKLAPQLDGAFRADGVFAHDRLRFVDFVDDVEDLLEDVAWQEWGNKKAVDGFEEYMLRHYSGASGNVWSQRAPRQHGTRG
SIO_010081: PBXIP1
subclass of: SO_0000673
so part of: PBXIP1
location: join(147118..147177,147390..147495,147576..147643,147734..147872,147976..148188,148271..148294,148376..148449,148533..148658,148747..149699,149781..149838)
location: region:147118-149838:1
so has part: feature:147118-147177:1:exon
so has part: feature:147390-147495:1:exon
so has part: feature:147576-147643:1:exon
so has part: feature:147734-147872:1:exon
so has part: feature:147976-148188:1:exon
so has part: feature:148271-148294:1:exon
so has part: feature:148376-148449:1:exon
so has part: feature:148533-148658:1:exon
so has part: feature:148747-149699:1:exon
so has part: feature:149781-149838:1:exon

XP_032608699.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:147118-147177:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:147390-147495:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:147576-147643:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:147734-147872:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:147976-148188:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:148271-148294:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:148376-148449:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:148533-148658:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:148747-149699:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:149781-149838:1:exon

PMVK
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: PMVK
note: phosphomevalonate kinase; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: 150767..152451
location: region:150767-152451:1
so has part: feature:150767-152451:1:exon
subclass of: SO_0000010

100190393
type: Gene
SIO_000068: ncbigene

position:150767:1
position: 150767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:152451:1
position: 152451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:150767-152451:1:exon

PMVK
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: PMVK
product: phosphomevalonate kinase
inference: similar to RNA sequence, mRNA (same species):RefSeq:NM_001245642.1
exception: annotated by transcript or proteomic data
note: The RefSeq transcript has 8 substitutions, 2 non-frameshifting indels compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001245642.1
SIO_010081: PMVK
subclass of: SO_0000673
so part of: PMVK
location: join(150767..150856,150979..151042,151618..151770,151837..151966,152184..152451)
location: region:150767-152451:1
so has part: feature:150767-150856:1:exon
so has part: feature:150979-151042:1:exon
so has part: feature:151618-151770:1:exon
so has part: feature:151837-151966:1:exon
so has part: feature:152184-152451:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:150767-150856:1:exon

position:150856:1
position: 150856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:150979-151042:1:exon

position:150979:1
position: 150979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:151042:1
position: 151042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:151618-151770:1:exon

position:151618:1
position: 151618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:151770:1
position: 151770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:151837-151966:1:exon

position:151837:1
position: 151837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:151966:1
position: 151966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:152184-152451:1:exon

position:152184:1
position: 152184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PMVK
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: PMVK
inference: similar to AA sequence (same species):RefSeq:NP_001232571.1
exception: annotated by transcript or proteomic data
note: The RefSeq protein has 1 substitution compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: phosphomevalonate kinase
translation: MAAPRAVLLLSGKRKSGKDFVAEELRSRLGPDVCTILRLSGPLKEQYAKEHGLDFQRLLDASAYKEEFRQDMIRWGEEKRRADPGFFCRAAVQGALQPVWVVSDTRRLSDVEWFRAAYGDVVQTVRVVATEETRKRRNWVFVTGVDDAESECGLDQAVAFDWVITNDGDKVALDEQLEMLVQSLHSSL
SIO_010081: PMVK
subclass of: SO_0000673
so part of: PMVK
location: join(150774..150856,150979..151042,151618..151770,151837..151966,152184..152320)
location: region:150774-152320:1
so has part: feature:150774-150856:1:exon
so has part: feature:150979-151042:1:exon
so has part: feature:151618-151770:1:exon
so has part: feature:151837-151966:1:exon
so has part: feature:152184-152320:1:exon

NP_001232571.1
type: Protein
SIO_000068: ncbiprotein

position:150774:1
position: 150774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:152320:1
position: 152320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:150774-150856:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:150979-151042:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:151618-151770:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:151837-151966:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:152184-152320:1:exon

KCNN3
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: KCNN3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 153180..173755
location: region:153180-173755:1
so has part: feature:153180-173755:1:exon
subclass of: SO_0000010

101234207
type: Gene
SIO_000068: ncbigene

position:153180:1
position: 153180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:173755:1
position: 173755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:153180-173755:1:exon

KCNN3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: KCNN3
product: potassium calcium-activated channel subfamily N member 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 7 long SRA reads, 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 58 samples with support for all annotated introns
transcript id: XM_030291424.3
SIO_010081: KCNN3
subclass of: SO_0000673
so part of: KCNN3
location: join(153180..154026,156815..156910,160048..160466,163966..164107,165651..165761,166917..167044,167214..167283,167700..173755)
location: region:153180-173755:1
so has part: feature:153180-154026:1:exon
so has part: feature:156815-156910:1:exon
so has part: feature:160048-160466:1:exon
so has part: feature:163966-164107:1:exon
so has part: feature:165651-165761:1:exon
so has part: feature:166917-167044:1:exon
so has part: feature:167214-167283:1:exon
so has part: feature:167700-173755:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:153180-154026:1:exon

position:154026:1
position: 154026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:156815-156910:1:exon

position:156815:1
position: 156815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:156910:1
position: 156910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:160048-160466:1:exon

position:160048:1
position: 160048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:160466:1
position: 160466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:163966-164107:1:exon

position:163966:1
position: 163966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:164107:1
position: 164107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:165651-165761:1:exon

position:165651:1
position: 165651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:165761:1
position: 165761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:166917-167044:1:exon

position:166917:1
position: 166917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:167044:1
position: 167044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:167214-167283:1:exon

position:167214:1
position: 167214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:167283:1
position: 167283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:167700-173755:1:exon

position:167700:1
position: 167700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

KCNN3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: KCNN3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: small conductance calcium-activated potassium channel protein 3
translation: METSGHLHDSGVGDLEEDGRCPCPLPGDERSPPPPSALPPLQHSLLHSSPGSLRAPPPPPAAPAALHPSSRHGSQLNLGDHPAGSGVPSSKHRQPSPLVHRRDSNPFTEIAMSSCKYSGGVMKPLSRLSASRRNLIEAEPEAQPLQLFGAGEPPEIVVSREDNHAPTTHRATRPPARPAPTTFAKGPKRKAQNIGYRLGHRRALFEKRKRLSDYALIFGMFGIVVMVIETELSWGLYSKDSMFSLALKCLISLSTVILLGLIIAYHTREVQLFVIDNGADDWRIAMTYERILYISLEMLVCAIHPIPGEYKFFWTARLAFSYTPSRAEADVDIILSIPMFLRLYLIARVMLLHSKLFTDASSRSIGALNKINFNTRFVMKTLMTICPGTVLLVFSISLWIIAAWTVRVCERYHDQQDVTSNFLGAMWLISITFLSIGYGDMVPHTYCGKGVCLLTGIMGAGCTALVVAVVARKLELTKAEKHVHNFMMDTQLTKRIKNAAANVLRETWLIYKHTKLLKKIDHAKVRKHQRKFLQAIHQLRSVKMEQRKLSDQANTLVDLSKMQNVMYDLITELNDRSEDLEKQISGLESKLEQLSASFNSLPLLMADMLRQQQQRLLTAVLEARGVGVPGGTPQTPLSESPIGVSSTSFPTPYTSSSSC
SIO_010081: KCNN3
subclass of: SO_0000673
so part of: KCNN3
location: join(153310..154026,156815..156910,160048..160466,163966..164107,165651..165761,166917..167044,167214..167283,167700..167996)
location: region:153310-167996:1
so has part: feature:153310-154026:1:exon
so has part: feature:156815-156910:1:exon
so has part: feature:160048-160466:1:exon
so has part: feature:163966-164107:1:exon
so has part: feature:165651-165761:1:exon
so has part: feature:166917-167044:1:exon
so has part: feature:167214-167283:1:exon
so has part: feature:167700-167996:1:exon

XP_030147284.3
type: Protein
SIO_000068: ncbiprotein

position:153310:1
position: 153310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:167996:1
position: 167996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:153310-154026:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:156815-156910:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:160048-160466:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:163966-164107:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:165651-165761:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:166917-167044:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:167214-167283:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:167700-167996:1:exon

ADAR
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: ADAR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 183568..196523
location: region:183568-196523:1
so has part: feature:183568-196523:1:exon
subclass of: SO_0000010

100220215
type: Gene
SIO_000068: ncbigene

position:183568:1
position: 183568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:196523:1
position: 196523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:183568-196523:1:exon

ADAR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: ADAR
product: adenosine deaminase RNA specific, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs, 4 long SRA reads, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_041721174.1
SIO_010081: ADAR
subclass of: SO_0000673
so part of: ADAR
location: join(183568..183656,185649..187196,188477..188663,188741..188898,189302..189443,189629..189834,190044..190200,191142..191313,191899..191992,193336..193464,193571..193704,194165..194347,194771..194883,195326..195453,195757..196523)
location: region:183568-196523:1
so has part: feature:183568-183656:1:exon
so has part: feature:185649-187196:1:exon
so has part: feature:188477-188663:1:exon
so has part: feature:188741-188898:1:exon
so has part: feature:189302-189443:1:exon
so has part: feature:189629-189834:1:exon
so has part: feature:190044-190200:1:exon
so has part: feature:191142-191313:1:exon
so has part: feature:191899-191992:1:exon
so has part: feature:193336-193464:1:exon
so has part: feature:193571-193704:1:exon
so has part: feature:194165-194347:1:exon
so has part: feature:194771-194883:1:exon
so has part: feature:195326-195453:1:exon
so has part: feature:195757-196523:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:183568-183656:1:exon

position:183656:1
position: 183656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:185649-187196:1:exon

position:185649:1
position: 185649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:187196:1
position: 187196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:188477-188663:1:exon

position:188477:1
position: 188477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:188663:1
position: 188663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:188741-188898:1:exon

position:188741:1
position: 188741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:188898:1
position: 188898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:189302-189443:1:exon

position:189302:1
position: 189302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:189443:1
position: 189443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:189629-189834:1:exon

position:189629:1
position: 189629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:189834:1
position: 189834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:190044-190200:1:exon

position:190044:1
position: 190044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:190200:1
position: 190200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:191142-191313:1:exon

position:191142:1
position: 191142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:191313:1
position: 191313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:191899-191992:1:exon

position:191899:1
position: 191899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:191992:1
position: 191992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:193336-193464:1:exon

position:193336:1
position: 193336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:193464:1
position: 193464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:193571-193704:1:exon

position:193571:1
position: 193571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:193704:1
position: 193704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:194165-194347:1:exon

position:194165:1
position: 194165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:194347:1
position: 194347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:194771-194883:1:exon

position:194771:1
position: 194771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:194883:1
position: 194883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:195326-195453:1:exon

position:195326:1
position: 195326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:195453:1
position: 195453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:195757-196523:1:exon

position:195757:1
position: 195757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ADAR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: ADAR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: double-stranded RNA-specific adenosine deaminase isoform X1
translation: MAAARVTAHARGAPCAIGAPAAAARAGECGVSGSFSPGSSAAWFPRVSQECAMIRGAGRGRGSYLTQPRQNCPSTNRGLFKHPRTPQETNQESFLHQQFLTEQDAEVSVLQGQGSHKEWRTRGGRAAAPATAGRGQPSSSWAAGRRFSSRQEFSSQHPRLETLPRYCPSQHHRQENSRRDSDAVRLNFQRLSLAGQDYEREILTVLRQLGEGRTCTANDLARKLKTTKKEVNRVLYKLLKEGKLHKEGETPPLWRIPSPSSGRERSPTDHSASCTDPANCENRGERSTFGLGDAEMAETKEKICNYLFSVVETTALNLAKNIGFSRAKDVNAFLSALEKLGDVHKQNATPPRWSLTNRKRERMQMRLKASTVMQMADATTPESGLPSSFVPPCPPEVTAALPPVMKEEEESAENEQQPLGQAGQGSVGDKEADASEDTKPDFSSLSNYDNSENSKWTTDDIPDNLNAISKQPDKSECIMDSQSSPSYAAQFETAFPCTPAEKLIACQEKNPVSGLTEYSQYTYQHCDFIMLEQNGPSHEPRFKFQAVINGRQFPPAEAGSKKLAKQEAAANAMKVLMSEVENGRHSGIKCEEPFPSNSSEPELPLQLEPELSSAAAHLTLLPGKHPISILMEYGQKSGNIIEFQLLSQEGPPHDPRFSYCVKMGDQIFPAVVGNSKKGAKQMAAEVAVKILSGESVPHVLHEQPVVEPQSDQSMHNIATPDESKVVKTKGVGELIKYLNVNPVSGLLEYARSNGFAAEFKLIDQSGPPHDPKFVYQAKVGGRWFPAVTAHNKKQGKQEAADAALRVLIGESEKTERMEWMSVTELPVSGSTLHDQLAMLSHQRFNSLTARVQHSLLGRKILAAIIMRRGDKGLGVVVSIGTGNRCVKGEELSLKGETVNDCHAEIISRRGFVRFLYSELMKYDPSNPSSAEESIFEQAGGKKLKIKSSVTFHLYISTAPCGDGALFDKSCSDQANETGQPQHQPLFENPKQGKLRTKVENGEGTIPVESSDIVPTWDGIQHGERLRTMSCSDKILRWNILGLQGALLSHFLEPVYLHSVTLGYLYSQGHLTRAICCRMERDGSTLKEKLQAPYHINHPEVGRVSVYDSARQTGKTKESSVNWCLADESEVEILDGTKGKVDGVKLEVSRVSKRKMFSLFQQLCAKNNRQDLQGFSVYSDAKEAATAYQAAKQCFFSTLEELGYGSWIRKPQEEENFSVLDV
SIO_010081: ADAR
subclass of: SO_0000673
so part of: ADAR
location: join(183583..183656,185649..187196,188477..188663,188741..188898,189302..189443,189629..189834,190044..190200,191142..191313,191899..191992,193336..193464,193571..193704,194165..194347,194771..194883,195326..195453,195757..195997)
location: region:183583-195997:1
so has part: feature:183583-183656:1:exon
so has part: feature:185649-187196:1:exon
so has part: feature:188477-188663:1:exon
so has part: feature:188741-188898:1:exon
so has part: feature:189302-189443:1:exon
so has part: feature:189629-189834:1:exon
so has part: feature:190044-190200:1:exon
so has part: feature:191142-191313:1:exon
so has part: feature:191899-191992:1:exon
so has part: feature:193336-193464:1:exon
so has part: feature:193571-193704:1:exon
so has part: feature:194165-194347:1:exon
so has part: feature:194771-194883:1:exon
so has part: feature:195326-195453:1:exon
so has part: feature:195757-195997:1:exon

XP_041577108.1
type: Protein
SIO_000068: ncbiprotein

position:183583:1
position: 183583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:195997:1
position: 195997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:183583-183656:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:185649-187196:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:188477-188663:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:188741-188898:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:189302-189443:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:189629-189834:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:190044-190200:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:191142-191313:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:191899-191992:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:193336-193464:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:193571-193704:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:194165-194347:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:194771-194883:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:195326-195453:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:195757-195997:1:exon

ADAR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: ADAR
product: adenosine deaminase RNA specific, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 8 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 96 samples with support for all annotated introns
transcript id: XM_030291664.3
SIO_010081: ADAR
subclass of: SO_0000673
so part of: ADAR
location: join(183773..184431,185649..187196,188477..188663,188741..188898,189302..189443,189629..189834,190044..190200,191142..191313,191899..191992,193336..193464,193571..193704,194165..194347,194771..194883,195326..195453,195757..196523)
location: region:183773-196523:1
so has part: feature:183773-184431:1:exon
so has part: feature:185649-187196:1:exon
so has part: feature:188477-188663:1:exon
so has part: feature:188741-188898:1:exon
so has part: feature:189302-189443:1:exon
so has part: feature:189629-189834:1:exon
so has part: feature:190044-190200:1:exon
so has part: feature:191142-191313:1:exon
so has part: feature:191899-191992:1:exon
so has part: feature:193336-193464:1:exon
so has part: feature:193571-193704:1:exon
so has part: feature:194165-194347:1:exon
so has part: feature:194771-194883:1:exon
so has part: feature:195326-195453:1:exon
so has part: feature:195757-196523:1:exon

position:183773:1
position: 183773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:183773-184431:1:exon

position:184431:1
position: 184431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:185649-187196:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:188477-188663:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:188741-188898:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:189302-189443:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:189629-189834:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:190044-190200:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:191142-191313:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:191899-191992:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:193336-193464:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:193571-193704:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:194165-194347:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:194771-194883:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:195326-195453:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:195757-196523:1:exon

ADAR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: ADAR
product: adenosine deaminase RNA specific, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs, 2 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 103 samples with support for all annotated introns
transcript id: XM_041721175.1
SIO_010081: ADAR
subclass of: SO_0000673
so part of: ADAR
location: join(183775..185806,185908..187196,188477..188663,188741..188898,189302..189443,189629..189834,190044..190200,191142..191313,191899..191992,193336..193464,193571..193704,194165..194347,194771..194883,195326..195453,195757..196523)
location: region:183775-196523:1
so has part: feature:183775-185806:1:exon
so has part: feature:185908-187196:1:exon
so has part: feature:188477-188663:1:exon
so has part: feature:188741-188898:1:exon
so has part: feature:189302-189443:1:exon
so has part: feature:189629-189834:1:exon
so has part: feature:190044-190200:1:exon
so has part: feature:191142-191313:1:exon
so has part: feature:191899-191992:1:exon
so has part: feature:193336-193464:1:exon
so has part: feature:193571-193704:1:exon
so has part: feature:194165-194347:1:exon
so has part: feature:194771-194883:1:exon
so has part: feature:195326-195453:1:exon
so has part: feature:195757-196523:1:exon

position:183775:1
position: 183775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:183775-185806:1:exon

position:185806:1
position: 185806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:185908-187196:1:exon

position:185908:1
position: 185908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:188477-188663:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:188741-188898:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:189302-189443:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:189629-189834:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:190044-190200:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:191142-191313:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:191899-191992:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:193336-193464:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:193571-193704:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:194165-194347:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:194771-194883:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:195326-195453:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:195757-196523:1:exon

ADAR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: ADAR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: double-stranded RNA-specific adenosine deaminase isoform X2
translation: MIRGAGRGRGSYLTQPRQNCPSTNRGLFKHPRTPQETNQESFLHQQFLTEQDAEVSVLQGQGSHKEWRTRGGRAAAPATAGRGQPSSSWAAGRRFSSRQEFSSQHPRLETLPRYCPSQHHRQENSRRDSDAVRLNFQRLSLAGQDYEREILTVLRQLGEGRTCTANDLARKLKTTKKEVNRVLYKLLKEGKLHKEGETPPLWRIPSPSSGRERSPTDHSASCTDPANCENRGERSTFGLGDAEMAETKEKICNYLFSVVETTALNLAKNIGFSRAKDVNAFLSALEKLGDVHKQNATPPRWSLTNRKRERMQMRLKASTVMQMADATTPESGLPSSFVPPCPPEVTAALPPVMKEEEESAENEQQPLGQAGQGSVGDKEADASEDTKPDFSSLSNYDNSENSKWTTDDIPDNLNAISKQPDKSECIMDSQSSPSYAAQFETAFPCTPAEKLIACQEKNPVSGLTEYSQYTYQHCDFIMLEQNGPSHEPRFKFQAVINGRQFPPAEAGSKKLAKQEAAANAMKVLMSEVENGRHSGIKCEEPFPSNSSEPELPLQLEPELSSAAAHLTLLPGKHPISILMEYGQKSGNIIEFQLLSQEGPPHDPRFSYCVKMGDQIFPAVVGNSKKGAKQMAAEVAVKILSGESVPHVLHEQPVVEPQSDQSMHNIATPDESKVVKTKGVGELIKYLNVNPVSGLLEYARSNGFAAEFKLIDQSGPPHDPKFVYQAKVGGRWFPAVTAHNKKQGKQEAADAALRVLIGESEKTERMEWMSVTELPVSGSTLHDQLAMLSHQRFNSLTARVQHSLLGRKILAAIIMRRGDKGLGVVVSIGTGNRCVKGEELSLKGETVNDCHAEIISRRGFVRFLYSELMKYDPSNPSSAEESIFEQAGGKKLKIKSSVTFHLYISTAPCGDGALFDKSCSDQANETGQPQHQPLFENPKQGKLRTKVENGEGTIPVESSDIVPTWDGIQHGERLRTMSCSDKILRWNILGLQGALLSHFLEPVYLHSVTLGYLYSQGHLTRAICCRMERDGSTLKEKLQAPYHINHPEVGRVSVYDSARQTGKTKESSVNWCLADESEVEILDGTKGKVDGVKLEVSRVSKRKMFSLFQQLCAKNNRQDLQGFSVYSDAKEAATAYQAAKQCFFSTLEELGYGSWIRKPQEEENFSVLDV
SIO_010081: ADAR
subclass of: SO_0000673
so part of: ADAR
location: join(185731..187196,188477..188663,188741..188898,189302..189443,189629..189834,190044..190200,191142..191313,191899..191992,193336..193464,193571..193704,194165..194347,194771..194883,195326..195453,195757..195997)
location: region:185731-195997:1
so has part: feature:185731-187196:1:exon
so has part: feature:188477-188663:1:exon
so has part: feature:188741-188898:1:exon
so has part: feature:189302-189443:1:exon
so has part: feature:189629-189834:1:exon
so has part: feature:190044-190200:1:exon
so has part: feature:191142-191313:1:exon
so has part: feature:191899-191992:1:exon
so has part: feature:193336-193464:1:exon
so has part: feature:193571-193704:1:exon
so has part: feature:194165-194347:1:exon
so has part: feature:194771-194883:1:exon
so has part: feature:195326-195453:1:exon
so has part: feature:195757-195997:1:exon

XP_030147524.3
type: Protein
SIO_000068: ncbiprotein

position:185731:1
position: 185731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:185731-187196:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:188477-188663:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:188741-188898:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:189302-189443:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:189629-189834:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:190044-190200:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:191142-191313:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:191899-191992:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:193336-193464:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:193571-193704:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:194165-194347:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:194771-194883:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:195326-195453:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:195757-195997:1:exon

ADAR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: ADAR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: double-stranded RNA-specific adenosine deaminase isoform X3
translation: MAETKEKICNYLFSVVETTALNLAKNIGFSRAKDVNAFLSALEKLGDVHKQNATPPRWSLTNRKRERMQMRLKASTVMQMADATTPESGLPSSFVPPCPPEVTAALPPVMKEEEESAENEQQPLGQAGQGSVGDKEADASEDTKPDFSSLSNYDNSENSKWTTDDIPDNLNAISKQPDKSECIMDSQSSPSYAAQFETAFPCTPAEKLIACQEKNPVSGLTEYSQYTYQHCDFIMLEQNGPSHEPRFKFQAVINGRQFPPAEAGSKKLAKQEAAANAMKVLMSEVENGRHSGIKCEEPFPSNSSEPELPLQLEPELSSAAAHLTLLPGKHPISILMEYGQKSGNIIEFQLLSQEGPPHDPRFSYCVKMGDQIFPAVVGNSKKGAKQMAAEVAVKILSGESVPHVLHEQPVVEPQSDQSMHNIATPDESKVVKTKGVGELIKYLNVNPVSGLLEYARSNGFAAEFKLIDQSGPPHDPKFVYQAKVGGRWFPAVTAHNKKQGKQEAADAALRVLIGESEKTERMEWMSVTELPVSGSTLHDQLAMLSHQRFNSLTARVQHSLLGRKILAAIIMRRGDKGLGVVVSIGTGNRCVKGEELSLKGETVNDCHAEIISRRGFVRFLYSELMKYDPSNPSSAEESIFEQAGGKKLKIKSSVTFHLYISTAPCGDGALFDKSCSDQANETGQPQHQPLFENPKQGKLRTKVENGEGTIPVESSDIVPTWDGIQHGERLRTMSCSDKILRWNILGLQGALLSHFLEPVYLHSVTLGYLYSQGHLTRAICCRMERDGSTLKEKLQAPYHINHPEVGRVSVYDSARQTGKTKESSVNWCLADESEVEILDGTKGKVDGVKLEVSRVSKRKMFSLFQQLCAKNNRQDLQGFSVYSDAKEAATAYQAAKQCFFSTLEELGYGSWIRKPQEEENFSVLDV
SIO_010081: ADAR
subclass of: SO_0000673
so part of: ADAR
location: join(186460..187196,188477..188663,188741..188898,189302..189443,189629..189834,190044..190200,191142..191313,191899..191992,193336..193464,193571..193704,194165..194347,194771..194883,195326..195453,195757..195997)
location: region:186460-195997:1
so has part: feature:186460-187196:1:exon
so has part: feature:188477-188663:1:exon
so has part: feature:188741-188898:1:exon
so has part: feature:189302-189443:1:exon
so has part: feature:189629-189834:1:exon
so has part: feature:190044-190200:1:exon
so has part: feature:191142-191313:1:exon
so has part: feature:191899-191992:1:exon
so has part: feature:193336-193464:1:exon
so has part: feature:193571-193704:1:exon
so has part: feature:194165-194347:1:exon
so has part: feature:194771-194883:1:exon
so has part: feature:195326-195453:1:exon
so has part: feature:195757-195997:1:exon

XP_041577109.1
type: Protein
SIO_000068: ncbiprotein

position:186460:1
position: 186460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:186460-187196:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:188477-188663:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:188741-188898:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:189302-189443:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:189629-189834:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:190044-190200:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:191142-191313:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:191899-191992:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:193336-193464:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:193571-193704:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:194165-194347:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:194771-194883:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:195326-195453:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:195757-195997:1:exon

CHRNB2
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: CHRNB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(198388..202010)
location: region:198388-202010:-1
so has part: feature:198388-202010:-1:exon
subclass of: SO_0000010

100223092
type: Gene
SIO_000068: ncbigene

position:198388:-1
position: 198388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:202010:-1
position: 202010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:198388-202010:-1:exon

CHRNB2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: CHRNB2
product: cholinergic receptor nicotinic beta 2 subunit
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 5 ESTs, 1 long SRA read, 61 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 146 samples with support for all annotated introns
transcript id: XM_030291667.3
SIO_010081: CHRNB2
subclass of: SO_0000673
so part of: CHRNB2
location: complement(join(198388..198642,199124..200084,200192..200301,200545..200589,200687..200832,201478..202010))
location: region:198388-202010:-1
so has part: feature:201478-202010:-1:exon
so has part: feature:200687-200832:-1:exon
so has part: feature:200545-200589:-1:exon
so has part: feature:200192-200301:-1:exon
so has part: feature:199124-200084:-1:exon
so has part: feature:198388-198642:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:201478-202010:-1:exon

position:201478:-1
position: 201478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:200687-200832:-1:exon

position:200687:-1
position: 200687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:200832:-1
position: 200832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:200545-200589:-1:exon

position:200545:-1
position: 200545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:200589:-1
position: 200589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:200192-200301:-1:exon

position:200192:-1
position: 200192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:200301:-1
position: 200301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:199124-200084:-1:exon

position:199124:-1
position: 199124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:200084:-1
position: 200084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:198388-198642:-1:exon

position:198642:-1
position: 198642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CHRNB2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: CHRNB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuronal acetylcholine receptor subunit beta-2
translation: MALLRVLCLLAALRRSLGTDTEERLVEYLLDPARYNKLIRPATNGSELVTVQLMVSLAQLISVHEREQIMTTNVWLTQEWEDYRLTWKPEDFDNMKKVRLPSKHIWLPDVVLYNNADGMYEVSFYSNAVISYDGSIFWLPPAIYKSACKIEVKHFPFDQQNCTMKFRSWTYDRTEIDLVLKSEVASLDDFTPSGEWDIVALPGRRNENPDDSTYVDITYDFIIRRKPLFYTINLIIPCILITSLAILVFYLPSDCGEKMTLCISVLLALTVFLLLISKIVPPTSLDVPLVGKYLMFTMVLVTFSIVTSVCVLNVHHRSPTTHTMPPWVRTLFLHKLPALLFMKQPRQSCARQRLRQRRHTQERAAAATLFVQAGARACTCYANPGAAKAEGLNGYRERQGQAAGPAAGCGCGLQEAVDGVRFIADHMRSEDDDQSVSEDWKYVAMVIDRLFLWIFVFVCVFGTIGMFLQPLFQNYTTNSLLQLGQGTPTSK
SIO_010081: CHRNB2
subclass of: SO_0000673
so part of: CHRNB2
location: complement(join(198472..198642,199124..200084,200192..200301,200545..200589,200687..200832,201478..201520))
location: region:198472-201520:-1
so has part: feature:201478-201520:-1:exon
so has part: feature:200687-200832:-1:exon
so has part: feature:200545-200589:-1:exon
so has part: feature:200192-200301:-1:exon
so has part: feature:199124-200084:-1:exon
so has part: feature:198472-198642:-1:exon

XP_030147527.3
type: Protein
SIO_000068: ncbiprotein

position:198472:-1
position: 198472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:201520:-1
position: 201520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:201478-201520:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:200687-200832:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:200545-200589:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:200192-200301:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:199124-200084:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:198472-198642:-1:exon

UBE2Q1
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: UBE2Q1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 202053..209771
location: region:202053-209771:1
so has part: feature:202053-209771:1:exon
subclass of: SO_0000010

100225962
type: Gene
SIO_000068: ncbigene

position:202053:1
position: 202053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:209771:1
position: 209771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:202053-209771:1:exon

UBE2Q1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: UBE2Q1
product: ubiquitin conjugating enzyme E2 Q1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 44 ESTs, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 163 samples with support for all annotated introns
transcript id: XM_030291666.3
SIO_010081: UBE2Q1
subclass of: SO_0000673
so part of: UBE2Q1
location: join(202053..202493,203474..203578,203862..203966,204272..204322,206203..206343,206902..206986,207406..207466,207971..208061,208145..208203,208441..208489,208657..208752,208891..208957,209349..209771)
location: region:202053-209771:1
so has part: feature:202053-202493:1:exon
so has part: feature:203474-203578:1:exon
so has part: feature:203862-203966:1:exon
so has part: feature:204272-204322:1:exon
so has part: feature:206203-206343:1:exon
so has part: feature:206902-206986:1:exon
so has part: feature:207406-207466:1:exon
so has part: feature:207971-208061:1:exon
so has part: feature:208145-208203:1:exon
so has part: feature:208441-208489:1:exon
so has part: feature:208657-208752:1:exon
so has part: feature:208891-208957:1:exon
so has part: feature:209349-209771:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:202053-202493:1:exon

position:202493:1
position: 202493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:203474-203578:1:exon

position:203474:1
position: 203474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:203578:1
position: 203578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:203862-203966:1:exon

position:203862:1
position: 203862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:203966:1
position: 203966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:204272-204322:1:exon

position:204272:1
position: 204272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:204322:1
position: 204322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:206203-206343:1:exon

position:206203:1
position: 206203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:206343:1
position: 206343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:206902-206986:1:exon

position:206902:1
position: 206902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:206986:1
position: 206986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:207406-207466:1:exon

position:207406:1
position: 207406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:207466:1
position: 207466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:207971-208061:1:exon

position:207971:1
position: 207971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:208061:1
position: 208061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:208145-208203:1:exon

position:208145:1
position: 208145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:208203:1
position: 208203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:208441-208489:1:exon

position:208441:1
position: 208441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:208489:1
position: 208489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:208657-208752:1:exon

position:208657:1
position: 208657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:208752:1
position: 208752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:208891-208957:1:exon

position:208891:1
position: 208891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:208957:1
position: 208957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:209349-209771:1:exon

position:209349:1
position: 209349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

UBE2Q1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: UBE2Q1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-conjugating enzyme E2 Q1
translation: MSRDASGGAAPPVPATALPGAGPSRRHLGRAPGLRRRRRRSGSLHGKMQRAGPEEAARAQAAAGGPGRSGAEVAAAPAGRLLRRELRLLESIFHRGHERFRIGSACPDEISCEFVPGAGARAGASASRGPPPGPVRIHCNITESYPAVPPIWSVESDDPNLAAILERLVEVRKGNTLLLQHLKRIISDLCKLYNLPQHPDVEMLDQPLPAEQSTQEEVSSEEEDEEMPEDTEDLDHYEMKEEEPADGRKTEDEGIGKENLAILEKIKKNQRQDYLNGAVSGSVQATDRLMKELRDIYRSPSFKGGYYAVELVNDSLYDWNVKLLKVDEDSALHNDLQILKEKEGTDYILLNFSFKDNFPFDPPFVRVVSPVLSGGYVLGGGAICMELLTKQGWSSAYSIESVIMQISATLVKGKARVQFGANKNQYSLTRAQQSYKSLVQIHEKNGWYTPPKEDG
SIO_010081: UBE2Q1
subclass of: SO_0000673
so part of: UBE2Q1
location: join(202068..202493,203474..203578,203862..203966,204272..204322,206203..206343,206902..206986,207406..207466,207971..208061,208145..208203,208441..208489,208657..208752,208891..208957,209349..209380)
location: region:202068-209380:1
so has part: feature:202068-202493:1:exon
so has part: feature:203474-203578:1:exon
so has part: feature:203862-203966:1:exon
so has part: feature:204272-204322:1:exon
so has part: feature:206203-206343:1:exon
so has part: feature:206902-206986:1:exon
so has part: feature:207406-207466:1:exon
so has part: feature:207971-208061:1:exon
so has part: feature:208145-208203:1:exon
so has part: feature:208441-208489:1:exon
so has part: feature:208657-208752:1:exon
so has part: feature:208891-208957:1:exon
so has part: feature:209349-209380:1:exon

XP_030147526.3
type: Protein
SIO_000068: ncbiprotein

position:202068:1
position: 202068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:209380:1
position: 209380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:202068-202493:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:203474-203578:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:203862-203966:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:204272-204322:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:206203-206343:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:206902-206986:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:207406-207466:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:207971-208061:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:208145-208203:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:208441-208489:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:208657-208752:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:208891-208957:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:209349-209380:1:exon

SHE
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: SHE
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 212721..217134
location: region:212721-217134:1
so has part: feature:212721-217134:1:exon
subclass of: SO_0000010

100228820
type: Gene
SIO_000068: ncbigene

position:212721:1
position: 212721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:217134:1
position: 217134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:212721-217134:1:exon

SHE
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: SHE
product: Src homology 2 domain containing E
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 92 samples with support for all annotated introns
transcript id: XM_030291220.3
SIO_010081: SHE
subclass of: SO_0000673
so part of: SHE
location: join(212721..213687,214294..214420,215205..215513,215932..216082,216165..216284,216668..217134)
location: region:212721-217134:1
so has part: feature:212721-213687:1:exon
so has part: feature:214294-214420:1:exon
so has part: feature:215205-215513:1:exon
so has part: feature:215932-216082:1:exon
so has part: feature:216165-216284:1:exon
so has part: feature:216668-217134:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:212721-213687:1:exon

position:213687:1
position: 213687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:214294-214420:1:exon

position:214294:1
position: 214294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:214420:1
position: 214420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:215205-215513:1:exon

position:215205:1
position: 215205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:215513:1
position: 215513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:215932-216082:1:exon

position:215932:1
position: 215932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:216082:1
position: 216082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:216165-216284:1:exon

position:216165:1
position: 216165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:216284:1
position: 216284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:216668-217134:1:exon

position:216668:1
position: 216668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SHE
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: SHE
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SH2 domain-containing adapter protein E
translation: MAAKWFKEFPSNLKTVSEKARPGSGSLGKSRKNSTAELGGYRAAGGGKEGGSRLSRDNLQGLLQAATGKMRKNSRVEGGTAEGPSKTYINRLIKVEASEKNGKGHPGPLPAGLPAPEQDKGKPPKTETVIILEDYADPYDAKRTKGQRDAERLGENDGYMEPYDAQQMITEIRRRGSKDPLVKAILLLDGPGEPGEGGAKLDLAKRLGGKEVAGKGPQLYDTPYEPGEGVAGGTPERRVRAGDGRLPENDERPAGEYEQPWEWKKEQIVKALSVQFEGSERPKEETVRQHLRQKSWTPKMLKPAGTEHSEGERVDPALALEKQPWYHGAITRAEAESRLQPCREAGYLVRTSESGSGKYSIALKTSQGCVHIIVAQTKDNKYTLSQASGVFASIPEVVHYYSTEKLPFKGAEHMALLHPVHCKLH
SIO_010081: SHE
subclass of: SO_0000673
so part of: SHE
location: join(213304..213687,214294..214420,215205..215513,215932..216082,216165..216284,216668..216854)
location: region:213304-216854:1
so has part: feature:213304-213687:1:exon
so has part: feature:214294-214420:1:exon
so has part: feature:215205-215513:1:exon
so has part: feature:215932-216082:1:exon
so has part: feature:216165-216284:1:exon
so has part: feature:216668-216854:1:exon

XP_030147080.1
type: Protein
SIO_000068: ncbiprotein

position:213304:1
position: 213304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:216854:1
position: 216854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:213304-213687:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:214294-214420:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:215205-215513:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:215932-216082:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:216165-216284:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:216668-216854:1:exon

IL6R
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: IL6R
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(217636..222072)
location: region:217636-222072:-1
so has part: feature:217636-222072:-1:exon
subclass of: SO_0000010

100231725
type: Gene
SIO_000068: ncbigene

position:217636:-1
position: 217636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:222072:-1
position: 222072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:217636-222072:-1:exon

IL6R
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: IL6R
product: interleukin 6 receptor, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 73 samples with support for all annotated introns
transcript id: XM_030291216.3
SIO_010081: IL6R
subclass of: SO_0000673
so part of: IL6R
location: complement(join(217636..218267,218344..218452,218542..218620,218747..218790,218871..219245,219325..219509,219854..219977,220060..220305,221397..222072))
location: region:217636-222072:-1
so has part: feature:221397-222072:-1:exon
so has part: feature:220060-220305:-1:exon
so has part: feature:219854-219977:-1:exon
so has part: feature:219325-219509:-1:exon
so has part: feature:218871-219245:-1:exon
so has part: feature:218747-218790:-1:exon
so has part: feature:218542-218620:-1:exon
so has part: feature:218344-218452:-1:exon
so has part: feature:217636-218267:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:221397-222072:-1:exon

position:221397:-1
position: 221397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:220060-220305:-1:exon

position:220060:-1
position: 220060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:220305:-1
position: 220305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:219854-219977:-1:exon

position:219854:-1
position: 219854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:219977:-1
position: 219977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:219325-219509:-1:exon

position:219325:-1
position: 219325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:219509:-1
position: 219509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:218871-219245:-1:exon

position:218871:-1
position: 218871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:219245:-1
position: 219245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:218747-218790:-1:exon

position:218747:-1
position: 218747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:218790:-1
position: 218790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:218542-218620:-1:exon

position:218542:-1
position: 218542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:218620:-1
position: 218620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:218344-218452:-1:exon

position:218344:-1
position: 218344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:218452:-1
position: 218452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:217636-218267:-1:exon

position:218267:-1
position: 218267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

IL6R
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: IL6R
product: interleukin 6 receptor, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_030291218.3
SIO_010081: IL6R
subclass of: SO_0000673
so part of: IL6R
location: complement(join(217636..218267,218344..218452,218542..218620,218747..218790,218871..219015,219124..219245,219325..219509,219854..219977,220060..220305,221397..222070))
location: region:217636-222070:-1
so has part: feature:221397-222070:-1:exon
so has part: feature:220060-220305:-1:exon
so has part: feature:219854-219977:-1:exon
so has part: feature:219325-219509:-1:exon
so has part: feature:219124-219245:-1:exon
so has part: feature:218871-219015:-1:exon
so has part: feature:218747-218790:-1:exon
so has part: feature:218542-218620:-1:exon
so has part: feature:218344-218452:-1:exon
so has part: feature:217636-218267:-1:exon

position:222070:-1
position: 222070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:221397-222070:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:220060-220305:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:219854-219977:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:219325-219509:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:219124-219245:-1:exon

position:219124:-1
position: 219124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:218871-219015:-1:exon

position:219015:-1
position: 219015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:218747-218790:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:218542-218620:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:218344-218452:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:217636-218267:-1:exon

IL6R
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: IL6R
product: interleukin 6 receptor, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 73 samples with support for all annotated introns
transcript id: XM_030291217.3
SIO_010081: IL6R
subclass of: SO_0000673
so part of: IL6R
location: complement(join(217636..218267,218344..218452,218542..218620,218747..218790,218871..219015,219085..219245,219325..219509,219854..219977,220060..220305,221397..222066))
location: region:217636-222066:-1
so has part: feature:221397-222066:-1:exon
so has part: feature:220060-220305:-1:exon
so has part: feature:219854-219977:-1:exon
so has part: feature:219325-219509:-1:exon
so has part: feature:219085-219245:-1:exon
so has part: feature:218871-219015:-1:exon
so has part: feature:218747-218790:-1:exon
so has part: feature:218542-218620:-1:exon
so has part: feature:218344-218452:-1:exon
so has part: feature:217636-218267:-1:exon

position:222066:-1
position: 222066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:221397-222066:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:220060-220305:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:219854-219977:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:219325-219509:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:219085-219245:-1:exon

position:219085:-1
position: 219085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:218871-219015:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:218747-218790:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:218542-218620:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:218344-218452:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:217636-218267:-1:exon

IL6R
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: IL6R
product: interleukin 6 receptor, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_030291219.3
SIO_010081: IL6R
subclass of: SO_0000673
so part of: IL6R
location: complement(join(217636..218267,218344..218452,218542..218620,218747..218790,218871..219245,219325..219509,219854..219957,220060..220193))
location: region:217636-220193:-1
so has part: feature:220060-220193:-1:exon
so has part: feature:219854-219957:-1:exon
so has part: feature:219325-219509:-1:exon
so has part: feature:218871-219245:-1:exon
so has part: feature:218747-218790:-1:exon
so has part: feature:218542-218620:-1:exon
so has part: feature:218344-218452:-1:exon
so has part: feature:217636-218267:-1:exon

position:220193:-1
position: 220193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:220060-220193:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:219854-219957:-1:exon

position:219957:-1
position: 219957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:219325-219509:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:218871-219245:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:218747-218790:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:218542-218620:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:218344-218452:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:217636-218267:-1:exon

IL6R
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: IL6R
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-6 receptor subunit alpha isoform X3
translation: MARPPGPLLLLLLLLLLLPLRFLLRLAAAGRPCGPAGLSRDTVLGRLGANITLTCQDEEPANATVWWQVQEQRAAGGWGRQLAEGNTLLLRRLRYEDSGHYSCTVGSHLLRSLRLLVAEPPETPQVSCYRRSHDKDVLCEWPQRKKPSPETRAVLWVRRRFVAENATEQRCRYFSKARKFVCRVKVPPGTDDTKHLVVSTCVSNSAGGSAGKDKIITLSGVLKPDPPVNVTVEALEKAPQRLQVNWSYPPSWDPRFYWLRFQVDQVTTTWLDIRDAWRGMRHVVQVRAKDEFGHGMWSEWSQEAVGTPWTDPCDLTSEMEPFSSQVPMEDGTYGVTLPPKLFGEDDTDGAAGSVMESSTHPVTSPYAFLVTGGSLLLGIALFVGIVVRYRQMWWTSGQETTKPEGEGQHMLVPLGLPPPTLSDTPLLSHPAPSAPAVLHMTQADCSSSGQ
SIO_010081: IL6R
subclass of: SO_0000673
so part of: IL6R
location: complement(join(218078..218267,218344..218452,218542..218620,218747..218790,218871..219015,219124..219245,219325..219509,219854..219977,220060..220305,221397..221505))
location: region:218078-221505:-1
so has part: feature:221397-221505:-1:exon
so has part: feature:220060-220305:-1:exon
so has part: feature:219854-219977:-1:exon
so has part: feature:219325-219509:-1:exon
so has part: feature:219124-219245:-1:exon
so has part: feature:218871-219015:-1:exon
so has part: feature:218747-218790:-1:exon
so has part: feature:218542-218620:-1:exon
so has part: feature:218344-218452:-1:exon
so has part: feature:218078-218267:-1:exon

XP_030147078.3
type: Protein
SIO_000068: ncbiprotein

position:218078:-1
position: 218078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:221505:-1
position: 221505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:221397-221505:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:220060-220305:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:219854-219977:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:219325-219509:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:219124-219245:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:218871-219015:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:218747-218790:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:218542-218620:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:218344-218452:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:218078-218267:-1:exon

IL6R
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: IL6R
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-6 receptor subunit alpha isoform X2
translation: MARPPGPLLLLLLLLLLLPLRFLLRLAAAGRPCGPAGLSRDTVLGRLGANITLTCQDEEPANATVWWQVQEQRAAGGWGRQLAEGNTLLLRRLRYEDSGHYSCTVGSHLLRSLRLLVAEPPETPQVSCYRRSHDKDVLCEWPQRKKPSPETRAVLWVRRRFVAENATEQRCRYFSKARKFVCRVKVPPGTDDTKHLVVSTCVSNSAGGSAGKDKIITLSGVLKPDPPVNVTVEALEKAPQRLQVNWSYPPSWDPRFYWLRFQVRYRPEPAPTFVEVDQVTTTWLDIRDAWRGMRHVVQVRAKDEFGHGMWSEWSQEAVGTPWTDPCDLTSEMEPFSSQVPMEDGTYGVTLPPKLFGEDDTDGAAGSVMESSTHPVTSPYAFLVTGGSLLLGIALFVGIVVRYRQMWWTSGQETTKPEGEGQHMLVPLGLPPPTLSDTPLLSHPAPSAPAVLHMTQADCSSSGQ
SIO_010081: IL6R
subclass of: SO_0000673
so part of: IL6R
location: complement(join(218078..218267,218344..218452,218542..218620,218747..218790,218871..219015,219085..219245,219325..219509,219854..219977,220060..220305,221397..221505))
location: region:218078-221505:-1
so has part: feature:221397-221505:-1:exon
so has part: feature:220060-220305:-1:exon
so has part: feature:219854-219977:-1:exon
so has part: feature:219325-219509:-1:exon
so has part: feature:219085-219245:-1:exon
so has part: feature:218871-219015:-1:exon
so has part: feature:218747-218790:-1:exon
so has part: feature:218542-218620:-1:exon
so has part: feature:218344-218452:-1:exon
so has part: feature:218078-218267:-1:exon

XP_030147077.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:221397-221505:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:220060-220305:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:219854-219977:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:219325-219509:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:219085-219245:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:218871-219015:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:218747-218790:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:218542-218620:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:218344-218452:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:218078-218267:-1:exon

IL6R
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: IL6R
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-6 receptor subunit alpha isoform X1
translation: MARPPGPLLLLLLLLLLLPLRFLLRLAAAGRPCGPAGLSRDTVLGRLGANITLTCQDEEPANATVWWQVQEQRAAGGWGRQLAEGNTLLLRRLRYEDSGHYSCTVGSHLLRSLRLLVAEPPETPQVSCYRRSHDKDVLCEWPQRKKPSPETRAVLWVRRRFVAENATEQRCRYFSKARKFVCRVKVPPGTDDTKHLVVSTCVSNSAGGSAGKDKIITLSGVLKPDPPVNVTVEALEKAPQRLQVNWSYPPSWDPRFYWLRFQVRYRPEPAPTFVEVRPCSLACCLSLARLSPALCPLQVDQVTTTWLDIRDAWRGMRHVVQVRAKDEFGHGMWSEWSQEAVGTPWTDPCDLTSEMEPFSSQVPMEDGTYGVTLPPKLFGEDDTDGAAGSVMESSTHPVTSPYAFLVTGGSLLLGIALFVGIVVRYRQMWWTSGQETTKPEGEGQHMLVPLGLPPPTLSDTPLLSHPAPSAPAVLHMTQADCSSSGQ
SIO_010081: IL6R
subclass of: SO_0000673
so part of: IL6R
location: complement(join(218078..218267,218344..218452,218542..218620,218747..218790,218871..219245,219325..219509,219854..219977,220060..220305,221397..221505))
location: region:218078-221505:-1
so has part: feature:221397-221505:-1:exon
so has part: feature:220060-220305:-1:exon
so has part: feature:219854-219977:-1:exon
so has part: feature:219325-219509:-1:exon
so has part: feature:218871-219245:-1:exon
so has part: feature:218747-218790:-1:exon
so has part: feature:218542-218620:-1:exon
so has part: feature:218344-218452:-1:exon
so has part: feature:218078-218267:-1:exon

XP_030147076.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:221397-221505:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:220060-220305:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:219854-219977:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:219325-219509:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:218871-219245:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:218747-218790:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:218542-218620:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:218344-218452:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:218078-218267:-1:exon

IL6R
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: IL6R
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-6 receptor subunit alpha isoform X4
translation: MRTPGTTAALWAATCCAPCGCWWQVSCYRRSHDKDVLCEWPQRKKPSPETRAVLWVRRRFVAENATEQRCRYFSKARKFVCRVKVPPGTDDTKHLVVSTCVSNSAGGSAGKDKIITLSGVLKPDPPVNVTVEALEKAPQRLQVNWSYPPSWDPRFYWLRFQVRYRPEPAPTFVEVRPCSLACCLSLARLSPALCPLQVDQVTTTWLDIRDAWRGMRHVVQVRAKDEFGHGMWSEWSQEAVGTPWTDPCDLTSEMEPFSSQVPMEDGTYGVTLPPKLFGEDDTDGAAGSVMESSTHPVTSPYAFLVTGGSLLLGIALFVGIVVRYRQMWWTSGQETTKPEGEGQHMLVPLGLPPPTLSDTPLLSHPAPSAPAVLHMTQADCSSSGQ
SIO_010081: IL6R
subclass of: SO_0000673
so part of: IL6R
location: complement(join(218078..218267,218344..218452,218542..218620,218747..218790,218871..219245,219325..219509,219854..219957,220060..220131))
location: region:218078-220131:-1
so has part: feature:220060-220131:-1:exon
so has part: feature:219854-219957:-1:exon
so has part: feature:219325-219509:-1:exon
so has part: feature:218871-219245:-1:exon
so has part: feature:218747-218790:-1:exon
so has part: feature:218542-218620:-1:exon
so has part: feature:218344-218452:-1:exon
so has part: feature:218078-218267:-1:exon

XP_030147079.3
type: Protein
SIO_000068: ncbiprotein

position:220131:-1
position: 220131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:220060-220131:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:219854-219957:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:219325-219509:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:218871-219245:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:218747-218790:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:218542-218620:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:218344-218452:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:218078-218267:-1:exon

ATP8B2
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: ATP8B2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(222206..232243)
location: region:222206-232243:-1
so has part: feature:222206-232243:-1:exon
subclass of: SO_0000010

100219240
type: Gene
SIO_000068: ncbigene

position:222206:-1
position: 222206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:232243:-1
position: 232243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:222206-232243:-1:exon

ATP8B2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: ATP8B2
product: ATPase phospholipid transporting 8B2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 1 long SRA read, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 81 samples with support for all annotated introns
transcript id: XM_030291214.3
SIO_010081: ATP8B2
subclass of: SO_0000673
so part of: ATP8B2
location: complement(join(222206..223036,223125..223255,223338..223476,223562..223807,223974..224057,224348..224571,224762..224945,225031..225169,225288..225393,225518..225629,225707..225871,226022..226137,226337..226525,226595..226760,226834..226877,227030..227238,227952..228148,228221..228309,228392..228550,229298..229377,229531..229601,229979..230051,230158..230219,230376..230474,230624..230737,231371..231429,232123..232243))
location: region:222206-232243:-1
so has part: feature:232123-232243:-1:exon
so has part: feature:231371-231429:-1:exon
so has part: feature:230624-230737:-1:exon
so has part: feature:230376-230474:-1:exon
so has part: feature:230158-230219:-1:exon
so has part: feature:229979-230051:-1:exon
so has part: feature:229531-229601:-1:exon
so has part: feature:229298-229377:-1:exon
so has part: feature:228392-228550:-1:exon
so has part: feature:228221-228309:-1:exon
so has part: feature:227952-228148:-1:exon
so has part: feature:227030-227238:-1:exon
so has part: feature:226834-226877:-1:exon
so has part: feature:226595-226760:-1:exon
so has part: feature:226337-226525:-1:exon
so has part: feature:226022-226137:-1:exon
so has part: feature:225707-225871:-1:exon
so has part: feature:225518-225629:-1:exon
so has part: feature:225288-225393:-1:exon
so has part: feature:225031-225169:-1:exon
so has part: feature:224762-224945:-1:exon
so has part: feature:224348-224571:-1:exon
so has part: feature:223974-224057:-1:exon
so has part: feature:223562-223807:-1:exon
so has part: feature:223338-223476:-1:exon
so has part: feature:223125-223255:-1:exon
so has part: feature:222206-223036:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:232123-232243:-1:exon

position:232123:-1
position: 232123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:231371-231429:-1:exon

position:231371:-1
position: 231371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:231429:-1
position: 231429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:230624-230737:-1:exon

position:230624:-1
position: 230624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:230737:-1
position: 230737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:230376-230474:-1:exon

position:230376:-1
position: 230376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:230474:-1
position: 230474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:230158-230219:-1:exon

position:230158:-1
position: 230158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:230219:-1
position: 230219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:229979-230051:-1:exon

position:229979:-1
position: 229979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:230051:-1
position: 230051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:229531-229601:-1:exon

position:229531:-1
position: 229531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:229601:-1
position: 229601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:229298-229377:-1:exon

position:229298:-1
position: 229298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:229377:-1
position: 229377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:228392-228550:-1:exon

position:228392:-1
position: 228392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:228550:-1
position: 228550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:228221-228309:-1:exon

position:228221:-1
position: 228221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:228309:-1
position: 228309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:227952-228148:-1:exon

position:227952:-1
position: 227952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:228148:-1
position: 228148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:227030-227238:-1:exon

position:227030:-1
position: 227030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:227238:-1
position: 227238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:226834-226877:-1:exon

position:226834:-1
position: 226834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:226877:-1
position: 226877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:226595-226760:-1:exon

position:226595:-1
position: 226595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:226760:-1
position: 226760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:226337-226525:-1:exon

position:226337:-1
position: 226337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:226525:-1
position: 226525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:226022-226137:-1:exon

position:226022:-1
position: 226022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:226137:-1
position: 226137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:225707-225871:-1:exon

position:225707:-1
position: 225707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:225871:-1
position: 225871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:225518-225629:-1:exon

position:225518:-1
position: 225518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:225629:-1
position: 225629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:225288-225393:-1:exon

position:225288:-1
position: 225288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:225393:-1
position: 225393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:225031-225169:-1:exon

position:225031:-1
position: 225031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:225169:-1
position: 225169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:224762-224945:-1:exon

position:224762:-1
position: 224762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:224945:-1
position: 224945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:224348-224571:-1:exon

position:224348:-1
position: 224348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:224571:-1
position: 224571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:223974-224057:-1:exon

position:223974:-1
position: 223974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:224057:-1
position: 224057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:223562-223807:-1:exon

position:223562:-1
position: 223562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:223807:-1
position: 223807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:223338-223476:-1:exon

position:223338:-1
position: 223338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:223476:-1
position: 223476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:223125-223255:-1:exon

position:223125:-1
position: 223125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:223255:-1
position: 223255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:222206-223036:-1:exon

position:223036:-1
position: 223036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ATP8B2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: ATP8B2
product: ATPase phospholipid transporting 8B2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 1 long SRA read, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_030291213.3
SIO_010081: ATP8B2
subclass of: SO_0000673
so part of: ATP8B2
location: complement(join(222206..223036,223125..223255,223338..223476,223562..223807,223974..224057,224348..224571,224762..224945,225031..225169,225288..225393,225518..225629,225707..225871,226022..226137,226337..226525,226595..226760,226834..226877,227030..227238,227952..228148,228221..228309,228392..228550,229298..229377,229531..229601,229979..230051,230158..230219,230376..230474,230624..230737,231378..231429,232123..232237))
location: region:222206-232237:-1
so has part: feature:232123-232237:-1:exon
so has part: feature:231378-231429:-1:exon
so has part: feature:230624-230737:-1:exon
so has part: feature:230376-230474:-1:exon
so has part: feature:230158-230219:-1:exon
so has part: feature:229979-230051:-1:exon
so has part: feature:229531-229601:-1:exon
so has part: feature:229298-229377:-1:exon
so has part: feature:228392-228550:-1:exon
so has part: feature:228221-228309:-1:exon
so has part: feature:227952-228148:-1:exon
so has part: feature:227030-227238:-1:exon
so has part: feature:226834-226877:-1:exon
so has part: feature:226595-226760:-1:exon
so has part: feature:226337-226525:-1:exon
so has part: feature:226022-226137:-1:exon
so has part: feature:225707-225871:-1:exon
so has part: feature:225518-225629:-1:exon
so has part: feature:225288-225393:-1:exon
so has part: feature:225031-225169:-1:exon
so has part: feature:224762-224945:-1:exon
so has part: feature:224348-224571:-1:exon
so has part: feature:223974-224057:-1:exon
so has part: feature:223562-223807:-1:exon
so has part: feature:223338-223476:-1:exon
so has part: feature:223125-223255:-1:exon
so has part: feature:222206-223036:-1:exon

position:232237:-1
position: 232237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:232123-232237:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:231378-231429:-1:exon

position:231378:-1
position: 231378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:230624-230737:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:230376-230474:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:230158-230219:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:229979-230051:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:229531-229601:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:229298-229377:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:228392-228550:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:228221-228309:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:227952-228148:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:227030-227238:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:226834-226877:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:226595-226760:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:226337-226525:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:226022-226137:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:225707-225871:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:225518-225629:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:225288-225393:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:225031-225169:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:224762-224945:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:224348-224571:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:223974-224057:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:223562-223807:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:223338-223476:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:223125-223255:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:222206-223036:-1:exon

ATP8B2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: ATP8B2
product: ATPase phospholipid transporting 8B2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 1 long SRA read, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 77 samples with support for all annotated introns
transcript id: XM_012570849.4
SIO_010081: ATP8B2
subclass of: SO_0000673
so part of: ATP8B2
location: complement(join(222206..223036,223125..223255,223338..223476,223562..223807,223974..224057,224348..224571,224762..224945,225031..225169,225288..225393,225518..225629,225707..225871,226022..226137,226337..226525,226595..226760,226834..226877,227030..227238,227952..228148,228221..228309,228392..228550,229298..229377,229531..229601,229979..230051,230158..230219,230376..230474,230624..230737,230836..231225))
location: region:222206-231225:-1
so has part: feature:230836-231225:-1:exon
so has part: feature:230624-230737:-1:exon
so has part: feature:230376-230474:-1:exon
so has part: feature:230158-230219:-1:exon
so has part: feature:229979-230051:-1:exon
so has part: feature:229531-229601:-1:exon
so has part: feature:229298-229377:-1:exon
so has part: feature:228392-228550:-1:exon
so has part: feature:228221-228309:-1:exon
so has part: feature:227952-228148:-1:exon
so has part: feature:227030-227238:-1:exon
so has part: feature:226834-226877:-1:exon
so has part: feature:226595-226760:-1:exon
so has part: feature:226337-226525:-1:exon
so has part: feature:226022-226137:-1:exon
so has part: feature:225707-225871:-1:exon
so has part: feature:225518-225629:-1:exon
so has part: feature:225288-225393:-1:exon
so has part: feature:225031-225169:-1:exon
so has part: feature:224762-224945:-1:exon
so has part: feature:224348-224571:-1:exon
so has part: feature:223974-224057:-1:exon
so has part: feature:223562-223807:-1:exon
so has part: feature:223338-223476:-1:exon
so has part: feature:223125-223255:-1:exon
so has part: feature:222206-223036:-1:exon

position:231225:-1
position: 231225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:230836-231225:-1:exon

position:230836:-1
position: 230836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:230624-230737:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:230376-230474:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:230158-230219:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:229979-230051:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:229531-229601:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:229298-229377:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:228392-228550:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:228221-228309:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:227952-228148:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:227030-227238:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:226834-226877:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:226595-226760:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:226337-226525:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:226022-226137:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:225707-225871:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:225518-225629:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:225288-225393:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:225031-225169:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:224762-224945:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:224348-224571:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:223974-224057:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:223562-223807:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:223338-223476:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:223125-223255:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:222206-223036:-1:exon

ATP8B2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: ATP8B2
product: ATPase phospholipid transporting 8B2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 1 long SRA read, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 55 samples with support for all annotated introns
transcript id: XM_041721073.1
SIO_010081: ATP8B2
subclass of: SO_0000673
so part of: ATP8B2
location: complement(join(222206..223036,223125..223255,223338..223476,223562..223807,223974..224057,224348..224571,224762..224945,225031..225169,225288..225393,225518..225629,225707..225871,226022..226137,226337..226525,226595..226760,226834..226877,227030..227238,227952..228148,228221..228309,228392..228550,229298..229377,229979..230055))
location: region:222206-230055:-1
so has part: feature:229979-230055:-1:exon
so has part: feature:229298-229377:-1:exon
so has part: feature:228392-228550:-1:exon
so has part: feature:228221-228309:-1:exon
so has part: feature:227952-228148:-1:exon
so has part: feature:227030-227238:-1:exon
so has part: feature:226834-226877:-1:exon
so has part: feature:226595-226760:-1:exon
so has part: feature:226337-226525:-1:exon
so has part: feature:226022-226137:-1:exon
so has part: feature:225707-225871:-1:exon
so has part: feature:225518-225629:-1:exon
so has part: feature:225288-225393:-1:exon
so has part: feature:225031-225169:-1:exon
so has part: feature:224762-224945:-1:exon
so has part: feature:224348-224571:-1:exon
so has part: feature:223974-224057:-1:exon
so has part: feature:223562-223807:-1:exon
so has part: feature:223338-223476:-1:exon
so has part: feature:223125-223255:-1:exon
so has part: feature:222206-223036:-1:exon

position:230055:-1
position: 230055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:229979-230055:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:229298-229377:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:228392-228550:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:228221-228309:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:227952-228148:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:227030-227238:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:226834-226877:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:226595-226760:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:226337-226525:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:226022-226137:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:225707-225871:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:225518-225629:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:225288-225393:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:225031-225169:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:224762-224945:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:224348-224571:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:223974-224057:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:223562-223807:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:223338-223476:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:223125-223255:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:222206-223036:-1:exon

ATP8B2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: ATP8B2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipid-transporting ATPase ID isoform X1
translation: MGCGAAGHGAVRGPPSPGGRASSASQRTGVQREVPSNCIKTSKYNIVTFLPVNLFEQFQEVANTYFLFLLILQLIPQISSLSWFTTIVPLVLVLTITAVKDATDDYFRHKSDNQVNNRQSQVLIGGVLQQEQWMNVRVGDIIKLENNQFVAADLLLLSSSEPHGLCYIETAELDGETNMKVRQAIPVTAELGDTSQLARFDGEVVCEPPNNKLDKFGGTLYWKESKYPLSNQNMLLRGCVLRNTEWCFGLVIFAGPDTKLMQNSGRTKFKRTSIDRLMNTLVLWIFGFLVCMGVILAIGNAIWEHEVGVCFQIYLPWDEGVHSAFFSGFLSFWSYIIILNTVVPISLYVSVEVIRLGHSYFINWDKKMYCAKRRTPAEARTTTLNEELGQVEYIFSDKTGTLTQNIMVFSKCSVNGHSYGDVQDMLGHKAELGERPEPVDFSFNPLADPRFQFWDPSLLEAVKLGDLHVHEFFRLLSLCHTVMSEEKSEGELLYKAQSPDEGALVTAARNFGFVFRSRTPKTITVHELGQAITYQLLAILDFNNIRKRMSVIVRSPEGKIRLYCKGADTILLERLHPLNQDLSSITTDHLNEYAGEGLRTLVLAYKDLEESYYKDWSERLHRVGSAPEAREDHLARLYDEVEHDMMLLGATAIEDKLQQGVPETIAILTLANIKIWVLTGDKQETAVNIGYSCKMLTDDMTEVFVVTGHTVLEVREELRKAREKMMDASHSVCNGFYQEKLSSKLTSVLEAIAGEYALVINGHSLAHALEADMEVEFLETACACKAVICCRVTPLQKAQVVELVKKYKKAVTLAIGDGANDVSMIKTAHIGVGISGQEGIQAVLASDYSFSQFKFLQRLLLVHGRWSYLRMCKFLCYFFYKNFAFTMVHFWFGFFCGFSAQTVYDQYFITLYNIVYTSLPVLAMGVFDQDVPEQRSMEYPKLYEPGQLNLLFNKREFFICIAQGIYTSILMFFIPYGVFADATRDDGAQLADYQSFAVTVATSLVIVVSVQIGLDTGFWTAINHFFIWGSLAAYFAILFTMHSDGLFRMFPHQFRFVGNAQNTLAQPTVWLTIALTAVVCIVPVVAFRFLKLDLKPELSDTVRYTQLVRKKQKTQHRCMRHAGRVGSRRSGYAFSHQEGFGELIMSGKNMRLSSLALSSFAPRPSTSWIDTLRKKKGCEGSSAGSPSGAADKTLRV
SIO_010081: ATP8B2
subclass of: SO_0000673
so part of: ATP8B2
location: complement(join(222749..223036,223125..223255,223338..223476,223562..223807,223974..224057,224348..224571,224762..224945,225031..225169,225288..225393,225518..225629,225707..225871,226022..226137,226337..226525,226595..226760,226834..226877,227030..227238,227952..228148,228221..228309,228392..228550,229298..229377,229531..229601,229979..230051,230158..230219,230376..230474,230624..230737,231378..231429,232123..232175))
location: region:222749-232175:-1
so has part: feature:232123-232175:-1:exon
so has part: feature:231378-231429:-1:exon
so has part: feature:230624-230737:-1:exon
so has part: feature:230376-230474:-1:exon
so has part: feature:230158-230219:-1:exon
so has part: feature:229979-230051:-1:exon
so has part: feature:229531-229601:-1:exon
so has part: feature:229298-229377:-1:exon
so has part: feature:228392-228550:-1:exon
so has part: feature:228221-228309:-1:exon
so has part: feature:227952-228148:-1:exon
so has part: feature:227030-227238:-1:exon
so has part: feature:226834-226877:-1:exon
so has part: feature:226595-226760:-1:exon
so has part: feature:226337-226525:-1:exon
so has part: feature:226022-226137:-1:exon
so has part: feature:225707-225871:-1:exon
so has part: feature:225518-225629:-1:exon
so has part: feature:225288-225393:-1:exon
so has part: feature:225031-225169:-1:exon
so has part: feature:224762-224945:-1:exon
so has part: feature:224348-224571:-1:exon
so has part: feature:223974-224057:-1:exon
so has part: feature:223562-223807:-1:exon
so has part: feature:223338-223476:-1:exon
so has part: feature:223125-223255:-1:exon
so has part: feature:222749-223036:-1:exon

XP_030147073.3
type: Protein
SIO_000068: ncbiprotein

position:222749:-1
position: 222749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:232175:-1
position: 232175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:232123-232175:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:231378-231429:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:230624-230737:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:230376-230474:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:230158-230219:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:229979-230051:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:229531-229601:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:229298-229377:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:228392-228550:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:228221-228309:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:227952-228148:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:227030-227238:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:226834-226877:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:226595-226760:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:226337-226525:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:226022-226137:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:225707-225871:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:225518-225629:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:225288-225393:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:225031-225169:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:224762-224945:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:224348-224571:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:223974-224057:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:223562-223807:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:223338-223476:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:223125-223255:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:222749-223036:-1:exon

ATP8B2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: ATP8B2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipid-transporting ATPase ID isoform X2
translation: MERCAARPAPEEERRVRANAREYNEKFQYASNCIKTSKYNIVTFLPVNLFEQFQEVANTYFLFLLILQLIPQISSLSWFTTIVPLVLVLTITAVKDATDDYFRHKSDNQVNNRQSQVLIGGVLQQEQWMNVRVGDIIKLENNQFVAADLLLLSSSEPHGLCYIETAELDGETNMKVRQAIPVTAELGDTSQLARFDGEVVCEPPNNKLDKFGGTLYWKESKYPLSNQNMLLRGCVLRNTEWCFGLVIFAGPDTKLMQNSGRTKFKRTSIDRLMNTLVLWIFGFLVCMGVILAIGNAIWEHEVGVCFQIYLPWDEGVHSAFFSGFLSFWSYIIILNTVVPISLYVSVEVIRLGHSYFINWDKKMYCAKRRTPAEARTTTLNEELGQVEYIFSDKTGTLTQNIMVFSKCSVNGHSYGDVQDMLGHKAELGERPEPVDFSFNPLADPRFQFWDPSLLEAVKLGDLHVHEFFRLLSLCHTVMSEEKSEGELLYKAQSPDEGALVTAARNFGFVFRSRTPKTITVHELGQAITYQLLAILDFNNIRKRMSVIVRSPEGKIRLYCKGADTILLERLHPLNQDLSSITTDHLNEYAGEGLRTLVLAYKDLEESYYKDWSERLHRVGSAPEAREDHLARLYDEVEHDMMLLGATAIEDKLQQGVPETIAILTLANIKIWVLTGDKQETAVNIGYSCKMLTDDMTEVFVVTGHTVLEVREELRKAREKMMDASHSVCNGFYQEKLSSKLTSVLEAIAGEYALVINGHSLAHALEADMEVEFLETACACKAVICCRVTPLQKAQVVELVKKYKKAVTLAIGDGANDVSMIKTAHIGVGISGQEGIQAVLASDYSFSQFKFLQRLLLVHGRWSYLRMCKFLCYFFYKNFAFTMVHFWFGFFCGFSAQTVYDQYFITLYNIVYTSLPVLAMGVFDQDVPEQRSMEYPKLYEPGQLNLLFNKREFFICIAQGIYTSILMFFIPYGVFADATRDDGAQLADYQSFAVTVATSLVIVVSVQIGLDTGFWTAINHFFIWGSLAAYFAILFTMHSDGLFRMFPHQFRFVGNAQNTLAQPTVWLTIALTAVVCIVPVVAFRFLKLDLKPELSDTVRYTQLVRKKQKTQHRCMRHAGRVGSRRSGYAFSHQEGFGELIMSGKNMRLSSLALSSFAPRPSTSWIDTLRKKKGCEGSSAGSPSGAADKTLRV
SIO_010081: ATP8B2
subclass of: SO_0000673
so part of: ATP8B2
location: complement(join(222749..223036,223125..223255,223338..223476,223562..223807,223974..224057,224348..224571,224762..224945,225031..225169,225288..225393,225518..225629,225707..225871,226022..226137,226337..226525,226595..226760,226834..226877,227030..227238,227952..228148,228221..228309,228392..228550,229298..229377,229531..229601,229979..230051,230158..230219,230376..230474,230624..230737,231371..231429,232123..232153))
location: region:222749-232153:-1
so has part: feature:232123-232153:-1:exon
so has part: feature:231371-231429:-1:exon
so has part: feature:230624-230737:-1:exon
so has part: feature:230376-230474:-1:exon
so has part: feature:230158-230219:-1:exon
so has part: feature:229979-230051:-1:exon
so has part: feature:229531-229601:-1:exon
so has part: feature:229298-229377:-1:exon
so has part: feature:228392-228550:-1:exon
so has part: feature:228221-228309:-1:exon
so has part: feature:227952-228148:-1:exon
so has part: feature:227030-227238:-1:exon
so has part: feature:226834-226877:-1:exon
so has part: feature:226595-226760:-1:exon
so has part: feature:226337-226525:-1:exon
so has part: feature:226022-226137:-1:exon
so has part: feature:225707-225871:-1:exon
so has part: feature:225518-225629:-1:exon
so has part: feature:225288-225393:-1:exon
so has part: feature:225031-225169:-1:exon
so has part: feature:224762-224945:-1:exon
so has part: feature:224348-224571:-1:exon
so has part: feature:223974-224057:-1:exon
so has part: feature:223562-223807:-1:exon
so has part: feature:223338-223476:-1:exon
so has part: feature:223125-223255:-1:exon
so has part: feature:222749-223036:-1:exon

XP_030147074.3
type: Protein
SIO_000068: ncbiprotein

position:232153:-1
position: 232153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:232123-232153:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:231371-231429:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:230624-230737:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:230376-230474:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:230158-230219:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:229979-230051:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:229531-229601:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:229298-229377:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:228392-228550:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:228221-228309:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:227952-228148:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:227030-227238:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:226834-226877:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:226595-226760:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:226337-226525:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:226022-226137:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:225707-225871:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:225518-225629:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:225288-225393:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:225031-225169:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:224762-224945:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:224348-224571:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:223974-224057:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:223562-223807:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:223338-223476:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:223125-223255:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:222749-223036:-1:exon

ATP8B2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: ATP8B2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipid-transporting ATPase ID isoform X3
translation: MSNCIKTSKYNIVTFLPVNLFEQFQEVANTYFLFLLILQLIPQISSLSWFTTIVPLVLVLTITAVKDATDDYFRHKSDNQVNNRQSQVLIGGVLQQEQWMNVRVGDIIKLENNQFVAADLLLLSSSEPHGLCYIETAELDGETNMKVRQAIPVTAELGDTSQLARFDGEVVCEPPNNKLDKFGGTLYWKESKYPLSNQNMLLRGCVLRNTEWCFGLVIFAGPDTKLMQNSGRTKFKRTSIDRLMNTLVLWIFGFLVCMGVILAIGNAIWEHEVGVCFQIYLPWDEGVHSAFFSGFLSFWSYIIILNTVVPISLYVSVEVIRLGHSYFINWDKKMYCAKRRTPAEARTTTLNEELGQVEYIFSDKTGTLTQNIMVFSKCSVNGHSYGDVQDMLGHKAELGERPEPVDFSFNPLADPRFQFWDPSLLEAVKLGDLHVHEFFRLLSLCHTVMSEEKSEGELLYKAQSPDEGALVTAARNFGFVFRSRTPKTITVHELGQAITYQLLAILDFNNIRKRMSVIVRSPEGKIRLYCKGADTILLERLHPLNQDLSSITTDHLNEYAGEGLRTLVLAYKDLEESYYKDWSERLHRVGSAPEAREDHLARLYDEVEHDMMLLGATAIEDKLQQGVPETIAILTLANIKIWVLTGDKQETAVNIGYSCKMLTDDMTEVFVVTGHTVLEVREELRKAREKMMDASHSVCNGFYQEKLSSKLTSVLEAIAGEYALVINGHSLAHALEADMEVEFLETACACKAVICCRVTPLQKAQVVELVKKYKKAVTLAIGDGANDVSMIKTAHIGVGISGQEGIQAVLASDYSFSQFKFLQRLLLVHGRWSYLRMCKFLCYFFYKNFAFTMVHFWFGFFCGFSAQTVYDQYFITLYNIVYTSLPVLAMGVFDQDVPEQRSMEYPKLYEPGQLNLLFNKREFFICIAQGIYTSILMFFIPYGVFADATRDDGAQLADYQSFAVTVATSLVIVVSVQIGLDTGFWTAINHFFIWGSLAAYFAILFTMHSDGLFRMFPHQFRFVGNAQNTLAQPTVWLTIALTAVVCIVPVVAFRFLKLDLKPELSDTVRYTQLVRKKQKTQHRCMRHAGRVGSRRSGYAFSHQEGFGELIMSGKNMRLSSLALSSFAPRPSTSWIDTLRKKKGCEGSSAGSPSGAADKTLRV
SIO_010081: ATP8B2
subclass of: SO_0000673
so part of: ATP8B2
location: complement(join(222749..223036,223125..223255,223338..223476,223562..223807,223974..224057,224348..224571,224762..224945,225031..225169,225288..225393,225518..225629,225707..225871,226022..226137,226337..226525,226595..226760,226834..226877,227030..227238,227952..228148,228221..228309,228392..228550,229298..229377,229531..229601,229979..230051,230158..230219,230376..230474,230624..230737,230836..230838))
location: region:222749-230838:-1
so has part: feature:230836-230838:-1:exon
so has part: feature:230624-230737:-1:exon
so has part: feature:230376-230474:-1:exon
so has part: feature:230158-230219:-1:exon
so has part: feature:229979-230051:-1:exon
so has part: feature:229531-229601:-1:exon
so has part: feature:229298-229377:-1:exon
so has part: feature:228392-228550:-1:exon
so has part: feature:228221-228309:-1:exon
so has part: feature:227952-228148:-1:exon
so has part: feature:227030-227238:-1:exon
so has part: feature:226834-226877:-1:exon
so has part: feature:226595-226760:-1:exon
so has part: feature:226337-226525:-1:exon
so has part: feature:226022-226137:-1:exon
so has part: feature:225707-225871:-1:exon
so has part: feature:225518-225629:-1:exon
so has part: feature:225288-225393:-1:exon
so has part: feature:225031-225169:-1:exon
so has part: feature:224762-224945:-1:exon
so has part: feature:224348-224571:-1:exon
so has part: feature:223974-224057:-1:exon
so has part: feature:223562-223807:-1:exon
so has part: feature:223338-223476:-1:exon
so has part: feature:223125-223255:-1:exon
so has part: feature:222749-223036:-1:exon

XP_012426303.3
type: Protein
SIO_000068: ncbiprotein

position:230838:-1
position: 230838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:230836-230838:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:230624-230737:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:230376-230474:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:230158-230219:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:229979-230051:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:229531-229601:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:229298-229377:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:228392-228550:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:228221-228309:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:227952-228148:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:227030-227238:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:226834-226877:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:226595-226760:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:226337-226525:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:226022-226137:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:225707-225871:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:225518-225629:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:225288-225393:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:225031-225169:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:224762-224945:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:224348-224571:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:223974-224057:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:223562-223807:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:223338-223476:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:223125-223255:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:222749-223036:-1:exon

ATP8B2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: ATP8B2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipid-transporting ATPase ID isoform X4
translation: MKVRQAIPVTAELGDTSQLARFDGEVVCEPPNNKLDKFGGTLYWKESKYPLSNQNMLLRGCVLRNTEWCFGLVIFAGPDTKLMQNSGRTKFKRTSIDRLMNTLVLWIFGFLVCMGVILAIGNAIWEHEVGVCFQIYLPWDEGVHSAFFSGFLSFWSYIIILNTVVPISLYVSVEVIRLGHSYFINWDKKMYCAKRRTPAEARTTTLNEELGQVEYIFSDKTGTLTQNIMVFSKCSVNGHSYGDVQDMLGHKAELGERPEPVDFSFNPLADPRFQFWDPSLLEAVKLGDLHVHEFFRLLSLCHTVMSEEKSEGELLYKAQSPDEGALVTAARNFGFVFRSRTPKTITVHELGQAITYQLLAILDFNNIRKRMSVIVRSPEGKIRLYCKGADTILLERLHPLNQDLSSITTDHLNEYAGEGLRTLVLAYKDLEESYYKDWSERLHRVGSAPEAREDHLARLYDEVEHDMMLLGATAIEDKLQQGVPETIAILTLANIKIWVLTGDKQETAVNIGYSCKMLTDDMTEVFVVTGHTVLEVREELRKAREKMMDASHSVCNGFYQEKLSSKLTSVLEAIAGEYALVINGHSLAHALEADMEVEFLETACACKAVICCRVTPLQKAQVVELVKKYKKAVTLAIGDGANDVSMIKTAHIGVGISGQEGIQAVLASDYSFSQFKFLQRLLLVHGRWSYLRMCKFLCYFFYKNFAFTMVHFWFGFFCGFSAQTVYDQYFITLYNIVYTSLPVLAMGVFDQDVPEQRSMEYPKLYEPGQLNLLFNKREFFICIAQGIYTSILMFFIPYGVFADATRDDGAQLADYQSFAVTVATSLVIVVSVQIGLDTGFWTAINHFFIWGSLAAYFAILFTMHSDGLFRMFPHQFRFVGNAQNTLAQPTVWLTIALTAVVCIVPVVAFRFLKLDLKPELSDTVRYTQLVRKKQKTQHRCMRHAGRVGSRRSGYAFSHQEGFGELIMSGKNMRLSSLALSSFAPRPSTSWIDTLRKKKGCEGSSAGSPSGAADKTLRV
SIO_010081: ATP8B2
subclass of: SO_0000673
so part of: ATP8B2
location: complement(join(222749..223036,223125..223255,223338..223476,223562..223807,223974..224057,224348..224571,224762..224945,225031..225169,225288..225393,225518..225629,225707..225871,226022..226137,226337..226525,226595..226760,226834..226877,227030..227238,227952..228148,228221..228309,228392..228550,229298..229367))
location: region:222749-229367:-1
so has part: feature:229298-229367:-1:exon
so has part: feature:228392-228550:-1:exon
so has part: feature:228221-228309:-1:exon
so has part: feature:227952-228148:-1:exon
so has part: feature:227030-227238:-1:exon
so has part: feature:226834-226877:-1:exon
so has part: feature:226595-226760:-1:exon
so has part: feature:226337-226525:-1:exon
so has part: feature:226022-226137:-1:exon
so has part: feature:225707-225871:-1:exon
so has part: feature:225518-225629:-1:exon
so has part: feature:225288-225393:-1:exon
so has part: feature:225031-225169:-1:exon
so has part: feature:224762-224945:-1:exon
so has part: feature:224348-224571:-1:exon
so has part: feature:223974-224057:-1:exon
so has part: feature:223562-223807:-1:exon
so has part: feature:223338-223476:-1:exon
so has part: feature:223125-223255:-1:exon
so has part: feature:222749-223036:-1:exon

XP_041577007.1
type: Protein
SIO_000068: ncbiprotein

position:229367:-1
position: 229367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:229298-229367:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:228392-228550:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:228221-228309:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:227952-228148:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:227030-227238:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:226834-226877:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:226595-226760:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:226337-226525:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:226022-226137:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:225707-225871:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:225518-225629:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:225288-225393:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:225031-225169:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:224762-224945:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:224348-224571:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:223974-224057:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:223562-223807:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:223338-223476:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:223125-223255:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:222749-223036:-1:exon

AQP10
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: AQP10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(232690..235097)
location: region:232690-235097:-1
so has part: feature:232690-235097:-1:exon
subclass of: SO_0000010

100222086
type: Gene
SIO_000068: ncbigene

position:232690:-1
position: 232690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:235097:-1
position: 235097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:232690-235097:-1:exon

AQP10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: AQP10
product: aquaporin 10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_002188024.4
SIO_010081: AQP10
subclass of: SO_0000673
so part of: AQP10
location: complement(join(232690..232986,233057..233274,233346..233464,233551..233688,233784..233910,234531..235097))
location: region:232690-235097:-1
so has part: feature:234531-235097:-1:exon
so has part: feature:233784-233910:-1:exon
so has part: feature:233551-233688:-1:exon
so has part: feature:233346-233464:-1:exon
so has part: feature:233057-233274:-1:exon
so has part: feature:232690-232986:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:234531-235097:-1:exon

position:234531:-1
position: 234531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:233784-233910:-1:exon

position:233784:-1
position: 233784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:233910:-1
position: 233910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:233551-233688:-1:exon

position:233551:-1
position: 233551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:233688:-1
position: 233688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:233346-233464:-1:exon

position:233346:-1
position: 233346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:233464:-1
position: 233464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:233057-233274:-1:exon

position:233057:-1
position: 233057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:233274:-1
position: 233274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:232690-232986:-1:exon

position:232986:-1
position: 232986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

AQP10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: AQP10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: aquaporin-10
translation: MRHLQHSRRCRCCHCCPCPLGTMGTTSFLTRAQSLLRVRNQLVRECLGEVLSTFVMMTITLSSAAQKIAFFETKGNLITSYLGGALGVMAGIYTAGGISGAHMNPAFSLAMCLTEQFPWWKFPIFVLVQTLGSFISAGAVYILYYDAIWHHSNGTLTVTGPQETASIFATYPADFVSIANGFLDQVIGTGVLIIAVMGIMDARNKPVPKGLEPVVVALLVLSIECSMGANCGCPLNPARDIGPRLFTYLAGWGPEVFSRGNGWWWVPLVAPLLGAAVGTYLYQLFVAFHYPDEDSEDVAEQGSIVLVNTAIDTDIGMSPKEKDTGETVPAGHPPTPHTNSTVSPTVTVTPLKES
SIO_010081: AQP10
subclass of: SO_0000673
so part of: AQP10
location: complement(join(232695..232986,233057..233274,233346..233464,233551..233688,233784..233910,234531..234701))
location: region:232695-234701:-1
so has part: feature:234531-234701:-1:exon
so has part: feature:233784-233910:-1:exon
so has part: feature:233551-233688:-1:exon
so has part: feature:233346-233464:-1:exon
so has part: feature:233057-233274:-1:exon
so has part: feature:232695-232986:-1:exon

XP_002188060.4
type: Protein
SIO_000068: ncbiprotein

position:232695:-1
position: 232695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:234701:-1
position: 234701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:234531-234701:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:233784-233910:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:233551-233688:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:233346-233464:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:233057-233274:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:232695-232986:-1:exon

HAX1
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: HAX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(235237..237060)
location: region:235237-237060:-1
so has part: feature:235237-237060:-1:exon
subclass of: SO_0000010

100227885
type: Gene
SIO_000068: ncbigene

position:235237:-1
position: 235237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:237060:-1
position: 237060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:235237-237060:-1:exon

HAX1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: HAX1
product: HCLS1 associated protein X-1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 14 ESTs, 4 long SRA reads, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 144 samples with support for all annotated introns
transcript id: XM_030291590.3
SIO_010081: HAX1
subclass of: SO_0000673
so part of: HAX1
location: complement(join(235237..235370,235459..235617,235690..235840,235935..236050,236169..236214,236335..236465,236546..236757,236924..237060))
location: region:235237-237060:-1
so has part: feature:236924-237060:-1:exon
so has part: feature:236546-236757:-1:exon
so has part: feature:236335-236465:-1:exon
so has part: feature:236169-236214:-1:exon
so has part: feature:235935-236050:-1:exon
so has part: feature:235690-235840:-1:exon
so has part: feature:235459-235617:-1:exon
so has part: feature:235237-235370:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:236924-237060:-1:exon

position:236924:-1
position: 236924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:236546-236757:-1:exon

position:236546:-1
position: 236546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:236757:-1
position: 236757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:236335-236465:-1:exon

position:236335:-1
position: 236335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:236465:-1
position: 236465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:236169-236214:-1:exon

position:236169:-1
position: 236169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:236214:-1
position: 236214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:235935-236050:-1:exon

position:235935:-1
position: 235935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:236050:-1
position: 236050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:235690-235840:-1:exon

position:235690:-1
position: 235690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:235840:-1
position: 235840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:235459-235617:-1:exon

position:235459:-1
position: 235459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:235617:-1
position: 235617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:235237-235370:-1:exon

position:235370:-1
position: 235370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HAX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: HAX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: HCLS1-associated protein X-1
translation: MSFYDVFRGFFGFPGPCRPRDPLFGGAAWDEEEEEEDDGGPSMSQPPQDFGFGFSPGSSRGAFEELFRDMGELLGVFGSFWAEPQQPFEPALPGPAEGSARRPLRDSMLKHPESPPASAAPGSSRPWRPFLGLEDAHRAPPGLKEDQDLDSQVSSAGLGTILRPGEPKSHSYFQSVSVTTVTLPDGGVEERRTVQDSQGRRETTVTRRRGDQAFITTTKEDGQQKDYREEVVNMDDRELAQFAGTWPQQEELRAANPSDPSSVLGRFFRRWFSSW
SIO_010081: HAX1
subclass of: SO_0000673
so part of: HAX1
location: complement(join(235499..235617,235690..235840,235935..236050,236169..236214,236335..236465,236546..236757,236924..236976))
location: region:235499-236976:-1
so has part: feature:236924-236976:-1:exon
so has part: feature:236546-236757:-1:exon
so has part: feature:236335-236465:-1:exon
so has part: feature:236169-236214:-1:exon
so has part: feature:235935-236050:-1:exon
so has part: feature:235690-235840:-1:exon
so has part: feature:235499-235617:-1:exon

XP_030147450.3
type: Protein
SIO_000068: ncbiprotein

position:235499:-1
position: 235499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:236976:-1
position: 236976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:236924-236976:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:236546-236757:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:236335-236465:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:236169-236214:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:235935-236050:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:235690-235840:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:235499-235617:-1:exon

UBAP2L
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: UBAP2L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(238377..268700)
location: region:238377-268700:-1
so has part: feature:238377-268700:-1:exon
subclass of: SO_0000010

100223094
type: Gene
SIO_000068: ncbigene

position:238377:-1
position: 238377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:268700:-1
position: 268700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:238377-268700:-1:exon

UBAP2L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: UBAP2L
product: ubiquitin associated protein 2 like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 10 ESTs, 5 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_032752985.2
SIO_010081: UBAP2L
subclass of: SO_0000673
so part of: UBAP2L
location: complement(join(238377..239330,239797..239847,240307..240504,240795..240862,242004..242109,242198..242415,243523..243604,244195..244248,244903..244991,245097..245292,245937..246009,246195..246369,246813..246867,247458..247647,248328..248500,248779..249056,250202..250403,251319..251490,251931..252016,253464..253516,256793..256867,258378..258487,258777..258822,259528..259623,259932..260100,262868..262978,264046..264123,264687..264816,268622..268700))
location: region:238377-268700:-1
so has part: feature:268622-268700:-1:exon
so has part: feature:264687-264816:-1:exon
so has part: feature:264046-264123:-1:exon
so has part: feature:262868-262978:-1:exon
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SIO_000300: 1
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urn:…
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urn:…
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urn:…
SIO_000300: 4
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SIO_000300: 5
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urn:…
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urn:…
SIO_000300: 10
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urn:…
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urn:…
SIO_000300: 12
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urn:…
SIO_000300: 13
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urn:…
SIO_000300: 14
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urn:…
SIO_000300: 15
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urn:…
SIO_000300: 16
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urn:…
SIO_000300: 17
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urn:…
SIO_000300: 18
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SIO_000300: 19
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urn:…
SIO_000300: 20
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urn:…
SIO_000300: 21
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SIO_000300: 23
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SIO_000300: 24
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SIO_000300: 25
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SIO_000300: 26
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SIO_000300: 27
SIO_000628: feature:240307-240504:-1:exon

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SIO_000300: 28
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SIO_000300: 29
SIO_000628: feature:238377-239330:-1:exon

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UBAP2L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: UBAP2L
product: ubiquitin associated protein 2 like, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 15 ESTs, 15 long SRA reads, 9 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 73 samples with support for all annotated introns
transcript id: XM_030291157.3
SIO_010081: UBAP2L
subclass of: SO_0000673
so part of: UBAP2L
location: complement(join(238377..239330,240307..240504,240795..240862,242004..242109,242198..242415,243523..243604,244195..244248,244903..244991,245097..245292,245937..246009,246195..246369,246813..246867,247458..247647,248328..248500,248779..249056,250202..250403,251319..251490,251931..252016,253464..253516,258378..258487,258777..258822,259528..259623,259932..260100,262868..262978,264046..264123,264687..264816,268622..268688))
location: region:238377-268688:-1
so has part: feature:268622-268688:-1:exon
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position:268688:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 1
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urn:…
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SIO_000300: 10
SIO_000628: feature:251931-252016:-1:exon

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SIO_000300: 11
SIO_000628: feature:251319-251490:-1:exon

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SIO_000300: 12
SIO_000628: feature:250202-250403:-1:exon

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SIO_000300: 13
SIO_000628: feature:248779-249056:-1:exon

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SIO_000300: 14
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SIO_000300: 22
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urn:…
SIO_000300: 23
SIO_000628: feature:242198-242415:-1:exon

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SIO_000300: 24
SIO_000628: feature:242004-242109:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:240795-240862:-1:exon

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SIO_000300: 26
SIO_000628: feature:240307-240504:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:238377-239330:-1:exon

UBAP2L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: UBAP2L
product: ubiquitin associated protein 2 like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 15 ESTs, 8 long SRA reads, 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 57 samples with support for all annotated introns
transcript id: XM_030291154.3
SIO_010081: UBAP2L
subclass of: SO_0000673
so part of: UBAP2L
location: complement(join(238377..239330,240307..240504,240795..240862,242004..242109,242198..242415,243523..243604,244195..244248,244903..244991,245097..245292,245937..246009,246195..246369,246813..246867,247458..247647,248328..248500,248779..249056,250202..250403,251319..251490,251931..252016,253464..253516,256808..256867,258378..258487,258777..258822,259528..259623,259932..260100,262868..262978,264046..264123,264687..264816,268622..268681))
location: region:238377-268681:-1
so has part: feature:268622-268681:-1:exon
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position:268681:-1
position: 268681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:268622-268681:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:264687-264816:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:264046-264123:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:262868-262978:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:259932-260100:-1:exon

urn:…
SIO_000300: 6
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SIO_000300: 7
SIO_000628: feature:258777-258822:-1:exon

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SIO_000300: 8
SIO_000628: feature:258378-258487:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:256808-256867:-1:exon

position:256808:-1
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reference: sequence
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urn:…
SIO_000300: 10
SIO_000628: feature:253464-253516:-1:exon

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SIO_000300: 11
SIO_000628: feature:251931-252016:-1:exon

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SIO_000300: 12
SIO_000628: feature:251319-251490:-1:exon

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SIO_000300: 13
SIO_000628: feature:250202-250403:-1:exon

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SIO_000300: 22
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urn:…
SIO_000300: 23
SIO_000628: feature:243523-243604:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:242198-242415:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:242004-242109:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:240795-240862:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:240307-240504:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:238377-239330:-1:exon

UBAP2L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: UBAP2L
product: ubiquitin associated protein 2 like, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 10 ESTs, 5 long SRA reads, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_041721063.1
SIO_010081: UBAP2L
subclass of: SO_0000673
so part of: UBAP2L
location: complement(join(238377..239330,239797..239847,240307..240504,240795..240862,242004..242109,242198..242415,243523..243604,244195..244248,244903..244991,245097..245292,245937..246009,246195..246369,246813..246867,247458..247647,248328..248500,248779..249056,250202..250403,251319..251490,251931..252016,253464..253516,258378..258487,258777..258822,259528..259623,259932..260100,262868..262978,264046..264123,264687..264816))
location: region:238377-264816:-1
so has part: feature:264687-264816:-1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:264687-264816:-1:exon

urn:…
SIO_000300: 2
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urn:…
SIO_000300: 3
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urn:…
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SIO_000628: feature:259932-260100:-1:exon

urn:…
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SIO_000628: feature:259528-259623:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:258777-258822:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:258378-258487:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:253464-253516:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:251931-252016:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:251319-251490:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:250202-250403:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:248779-249056:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:248328-248500:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:247458-247647:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:246813-246867:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:246195-246369:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:245937-246009:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:245097-245292:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:244903-244991:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:244195-244248:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:243523-243604:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:242198-242415:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:242004-242109:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:240795-240862:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:240307-240504:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:239797-239847:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:238377-239330:-1:exon

UBAP2L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: UBAP2L
product: ubiquitin associated protein 2 like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 10 ESTs, 5 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_041721060.1
SIO_010081: UBAP2L
subclass of: SO_0000673
so part of: UBAP2L
location: complement(join(238377..239330,239797..239847,240307..240504,240795..240862,242004..242109,242198..242415,243523..243604,244195..244248,244903..244991,245097..245292,245937..246009,246195..246369,246813..246867,247458..247647,248328..248500,248779..249056,250202..250403,251319..251490,251931..252016,253464..253516,256808..256867,258378..258487,258777..258822,259528..259623,259932..260100,262868..262978,264046..264123,264687..264816))
location: region:238377-264816:-1
so has part: feature:264687-264816:-1:exon
so has part: feature:264046-264123:-1:exon
so has part: feature:262868-262978:-1:exon
so has part: feature:259932-260100:-1:exon
so has part: feature:259528-259623:-1:exon
so has part: feature:258777-258822:-1:exon
so has part: feature:258378-258487:-1:exon
so has part: feature:256808-256867:-1:exon
so has part: feature:253464-253516:-1:exon
so has part: feature:251931-252016:-1:exon
so has part: feature:251319-251490:-1:exon
so has part: feature:250202-250403:-1:exon
so has part: feature:248779-249056:-1:exon
so has part: feature:248328-248500:-1:exon
so has part: feature:247458-247647:-1:exon
so has part: feature:246813-246867:-1:exon
so has part: feature:246195-246369:-1:exon
so has part: feature:245937-246009:-1:exon
so has part: feature:245097-245292:-1:exon
so has part: feature:244903-244991:-1:exon
so has part: feature:244195-244248:-1:exon
so has part: feature:243523-243604:-1:exon
so has part: feature:242198-242415:-1:exon
so has part: feature:242004-242109:-1:exon
so has part: feature:240795-240862:-1:exon
so has part: feature:240307-240504:-1:exon
so has part: feature:239797-239847:-1:exon
so has part: feature:238377-239330:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:264687-264816:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:264046-264123:-1:exon

urn:…
SIO_000300: 3
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urn:…
SIO_000300: 4
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urn:…
SIO_000300: 5
SIO_000628: feature:259528-259623:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:258777-258822:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:258378-258487:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:256808-256867:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:253464-253516:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:251931-252016:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:251319-251490:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:250202-250403:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:248779-249056:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:248328-248500:-1:exon

urn:…
SIO_000300: 15
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urn:…
SIO_000300: 16
SIO_000628: feature:246813-246867:-1:exon

urn:…
SIO_000300: 17
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urn:…
SIO_000300: 18
SIO_000628: feature:245937-246009:-1:exon

urn:…
SIO_000300: 19
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urn:…
SIO_000300: 20
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urn:…
SIO_000300: 21
SIO_000628: feature:244195-244248:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:243523-243604:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:242198-242415:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:242004-242109:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:240795-240862:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:240307-240504:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:239797-239847:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:238377-239330:-1:exon

UBAP2L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: UBAP2L
product: ubiquitin associated protein 2 like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 15 ESTs, 7 long SRA reads, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_041721062.1
SIO_010081: UBAP2L
subclass of: SO_0000673
so part of: UBAP2L
location: complement(join(238377..239330,240307..240504,240795..240862,242004..242109,242198..242415,243523..243604,244195..244248,244903..244991,245097..245292,245937..246009,246195..246369,246813..246867,247458..247647,248328..248500,248779..249056,250202..250403,251319..251490,251931..252016,253464..253516,256793..256867,258378..258487,258777..258822,259528..259623,259932..260100,262868..262978,264046..264123,264687..264816))
location: region:238377-264816:-1
so has part: feature:264687-264816:-1:exon
so has part: feature:264046-264123:-1:exon
so has part: feature:262868-262978:-1:exon
so has part: feature:259932-260100:-1:exon
so has part: feature:259528-259623:-1:exon
so has part: feature:258777-258822:-1:exon
so has part: feature:258378-258487:-1:exon
so has part: feature:256793-256867:-1:exon
so has part: feature:253464-253516:-1:exon
so has part: feature:251931-252016:-1:exon
so has part: feature:251319-251490:-1:exon
so has part: feature:250202-250403:-1:exon
so has part: feature:248779-249056:-1:exon
so has part: feature:248328-248500:-1:exon
so has part: feature:247458-247647:-1:exon
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so has part: feature:246195-246369:-1:exon
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so has part: feature:244903-244991:-1:exon
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so has part: feature:240795-240862:-1:exon
so has part: feature:240307-240504:-1:exon
so has part: feature:238377-239330:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:264687-264816:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:264046-264123:-1:exon

urn:…
SIO_000300: 3
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urn:…
SIO_000300: 4
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urn:…
SIO_000300: 5
SIO_000628: feature:259528-259623:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:258777-258822:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:258378-258487:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:256793-256867:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:253464-253516:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:251931-252016:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:251319-251490:-1:exon

urn:…
SIO_000300: 12
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urn:…
SIO_000300: 13
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urn:…
SIO_000300: 14
SIO_000628: feature:248328-248500:-1:exon

urn:…
SIO_000300: 15
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urn:…
SIO_000300: 16
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urn:…
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urn:…
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urn:…
SIO_000300: 20
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urn:…
SIO_000300: 21
SIO_000628: feature:244195-244248:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:243523-243604:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:242198-242415:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:242004-242109:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:240795-240862:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:240307-240504:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:238377-239330:-1:exon

UBAP2L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: UBAP2L
product: ubiquitin associated protein 2 like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 10 ESTs, 5 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_041721061.1
SIO_010081: UBAP2L
subclass of: SO_0000673
so part of: UBAP2L
location: complement(join(238377..239330,239797..239832,240307..240504,240795..240862,242004..242109,242198..242415,243523..243604,244195..244248,244903..244991,245097..245292,245937..246009,246195..246369,246813..246867,247458..247647,248328..248500,248779..249056,250202..250403,251319..251490,251931..252016,253464..253516,256793..256867,258378..258487,258777..258822,259528..259623,259932..260100,262868..262978,264046..264123,264687..264816))
location: region:238377-264816:-1
so has part: feature:264687-264816:-1:exon
so has part: feature:264046-264123:-1:exon
so has part: feature:262868-262978:-1:exon
so has part: feature:259932-260100:-1:exon
so has part: feature:259528-259623:-1:exon
so has part: feature:258777-258822:-1:exon
so has part: feature:258378-258487:-1:exon
so has part: feature:256793-256867:-1:exon
so has part: feature:253464-253516:-1:exon
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so has part: feature:240307-240504:-1:exon
so has part: feature:239797-239832:-1:exon
so has part: feature:238377-239330:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:264687-264816:-1:exon

urn:…
SIO_000300: 2
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urn:…
SIO_000300: 3
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urn:…
SIO_000300: 4
SIO_000628: feature:259932-260100:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:259528-259623:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:258777-258822:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:258378-258487:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:256793-256867:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:253464-253516:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:251931-252016:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:251319-251490:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:250202-250403:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:248779-249056:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:248328-248500:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:247458-247647:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:246813-246867:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:246195-246369:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:245937-246009:-1:exon

urn:…
SIO_000300: 19
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urn:…
SIO_000300: 20
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urn:…
SIO_000300: 21
SIO_000628: feature:244195-244248:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:243523-243604:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:242198-242415:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:242004-242109:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:240795-240862:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:240307-240504:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:239797-239832:-1:exon

position:239832:-1
position: 239832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:238377-239330:-1:exon

UBAP2L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: UBAP2L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-associated protein 2-like isoform X7
translation: MMTSVGTTRARGSWEQTQTQSQTQHKQRPQATAEQIRLAQMISDHNDADFEEKVKQLIDITGKNQDECVIALHDCNGDVNRAINVLLEGNPDTHSWEMVGKKKGVSGQKESGQTEPSEESKENRDRERDFSRRRGGLPRRGRGATRGREFRGQENGLDGAKSGGSSGRGTERGRRGRGRGRGGSGRRGGRFSAQGMGTFNPADYAEPASTDENYGNSNNTWNNTGSFEPDDGTSAWRAATEEWGTEDWNEDLSETKIFTASNVSSVPLPAENVTITAGQRIDLAVLLGKTPSSMENESTNLESSQTPSLAQPLVFSNSKQSALSQPASGNSFSHHSMVSMLGKGFGDVGEAKGSSTTGSQFLEQFKTAQALAQLAAQHTQPAGSTTAASWDMGSTTQTSSLVQYDLKNPTDSSVHSPFTKRQGFTSTSTMIEVFMQEKQPVVTASTTTPAPPSSPLPSKTNPVPQMSPGSSDNQSSSPQPAQQKLKQQKKKASLTSKIPALAVEMPGSSDISGLNLQFGALQFGSEPVLAEYESTPTTSAAVSQSQSSLYTSSASESSSTISSNQSQESGYQSGTIQTATFTSQNSAQGPLYEQRSTQTRRYPNSISSSPQKDLTQAKNGFSSVQPTPLQTTQAVEGATGPAVKSDSPSAPSIAPLNDGVSATSLLTTASQHSTALSSLSHSEELPSTTTAQLSSALPTQQNSLSSSTSSGRTSTSTLLHTSVESEASLHSSASTFSTSSSTVSAAPPVVSVSSSLSSVSSLGLSLSSNSTVTASTRSSVATTSGKAPPNLPPGVPPLLPNPYIMAPGLLHAYPPQVYGYDDLQMLQTRFPLDYYSIPFPTPTTPLTGRDGSLSSNPYSGDLTKFGRGDASSPAPATTLAQPQQSQTQTHHTTQQTFLNPALPPGYSYTSLPYYTGVPGLPSTFQYGPAVFPVAPTSSKQHGVNVSVNASATPFQQPSGYGSHGYSTGVSVTSSNTGVPDISGSVYSKTQQSFEKQGFHTGTPAASFNLPSALGSGGPINPATAAAYPPTPFMHILTPHQQPHSQILHHHLQQDGQSGSGQRSQGSSIPQKSQANKSAYNSYSWGAN
SIO_010081: UBAP2L
subclass of: SO_0000673
so part of: UBAP2L
location: complement(join(239235..239330,240307..240504,240795..240862,242004..242109,242198..242415,243523..243604,244195..244248,244903..244991,245097..245292,245937..246009,246195..246369,246813..246867,247458..247647,248328..248500,248779..249056,250202..250403,251319..251490,251931..252016,253464..253516,258378..258487,258777..258822,259528..259623,259932..260100,262868..262978,264046..264123,264687..264776))
location: region:239235-264776:-1
so has part: feature:264687-264776:-1:exon
so has part: feature:264046-264123:-1:exon
so has part: feature:262868-262978:-1:exon
so has part: feature:259932-260100:-1:exon
so has part: feature:259528-259623:-1:exon
so has part: feature:258777-258822:-1:exon
so has part: feature:258378-258487:-1:exon
so has part: feature:253464-253516:-1:exon
so has part: feature:251931-252016:-1:exon
so has part: feature:251319-251490:-1:exon
so has part: feature:250202-250403:-1:exon
so has part: feature:248779-249056:-1:exon
so has part: feature:248328-248500:-1:exon
so has part: feature:247458-247647:-1:exon
so has part: feature:246813-246867:-1:exon
so has part: feature:246195-246369:-1:exon
so has part: feature:245937-246009:-1:exon
so has part: feature:245097-245292:-1:exon
so has part: feature:244903-244991:-1:exon
so has part: feature:244195-244248:-1:exon
so has part: feature:243523-243604:-1:exon
so has part: feature:242198-242415:-1:exon
so has part: feature:242004-242109:-1:exon
so has part: feature:240795-240862:-1:exon
so has part: feature:240307-240504:-1:exon
so has part: feature:239235-239330:-1:exon

XP_030147017.1
type: Protein
SIO_000068: ncbiprotein

position:239235:-1
position: 239235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:264776:-1
position: 264776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:264687-264776:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:264046-264123:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:262868-262978:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:259932-260100:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:259528-259623:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:258777-258822:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:258378-258487:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:253464-253516:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:251931-252016:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:251319-251490:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:250202-250403:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:248779-249056:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:248328-248500:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:247458-247647:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:246813-246867:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:246195-246369:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:245937-246009:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:245097-245292:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:244903-244991:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:244195-244248:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:243523-243604:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:242198-242415:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:242004-242109:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:240795-240862:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:240307-240504:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:239235-239330:-1:exon

UBAP2L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: UBAP2L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-associated protein 2-like isoform X6
translation: MMTSVGTTRARGSWEQTQTQSQTQHKQRPQATAEQIRLAQMISDHNDADFEEKVKQLIDITGKNQDECVIALHDCNGDVNRAINVLLEGNPDTHSWEMVGKKKGVSGQKESGQTEPSEESKENRDRERDFSRRRGGLPRRGRGATRGREFRGQENGLDGAKSGGSSGRGTERGRRGRGRGRGGSGRRGGRFSAQGMGTFNPADYAEPASTDENYGNSNNTWNNTGSFEPDDGTSAWRAATEEWGTEDWNEDLSETKIFTASNVSSVPLPAENVTITAGQRIDLAVLLGKTPSSMENESTNLESSQTPSLAQPLVFSNSKQSALSQPASGNSFSHHSMVSMLGKGFGDVGEAKGSSTTGSQFLEQFKTAQALAQLAAQHTQPAGSTTAASWDMGSTTQTSSLVQYDLKNPTDSSVHSPFTKRQGFTSTSTMIEVFMQEKQPVVTASTTTPAPPSSPLPSKTNPVPQMSPGSSDNQSSSPQPAQQKLKQQKKKASLTSKIPALAVEMPGSSDISGLNLQFGALQFGSEPVLAEYESTPTTSAAVSQSQSSLYTSSASESSSTISSNQSQESGYQSGTIQTATFTSQNSAQGPLYEQRSTQTRRYPNSISSSPQKDLTQAKNGFSSVQPTPLQTTQAVEGATGPAVKSDSPSAPSIAPLNDGVSATSLLTTASQHSTALSSLSHSEELPSTTTAQLSSALPTQQNSLSSSTSSGRTSTSTLLHTSVESEASLHSSASTFSTSSSTVSAAPPVVSVSSSLSSVSSLGLSLSSNSTVTASTRSSVATTSGKAPPNLPPGVPPLLPNPYIMAPGLLHAYPPQVYGYDDLQMLQTRFPLDYYSIPFPTPTTPLTGRDGSLSSNPYSGDLTKFGRGDASSPAPATTLAQPQQSQTQTHHTTQQTFLNPALPPGYSYTSLPYYTGVPGLPSTFQYGPAVFPVAPTSSKQHGVNVSVNASATPFQQPSGYGSHGYSTGVSVTSSNTGVPDISGSVYSKTQQSFEKQGFHTGTPAASFNLPSALGSGGPINPATAAAYPPTPFMHILTPHQQPHSQILHHHLQQDGQLPYLQMILCCQRQQEDQSGSGQRSQGSSIPQKSQANKSAYNSYSWGAN
SIO_010081: UBAP2L
subclass of: SO_0000673
so part of: UBAP2L
location: complement(join(239235..239330,239797..239847,240307..240504,240795..240862,242004..242109,242198..242415,243523..243604,244195..244248,244903..244991,245097..245292,245937..246009,246195..246369,246813..246867,247458..247647,248328..248500,248779..249056,250202..250403,251319..251490,251931..252016,253464..253516,258378..258487,258777..258822,259528..259623,259932..260100,262868..262978,264046..264123,264687..264776))
location: region:239235-264776:-1
so has part: feature:264687-264776:-1:exon
so has part: feature:264046-264123:-1:exon
so has part: feature:262868-262978:-1:exon
so has part: feature:259932-260100:-1:exon
so has part: feature:259528-259623:-1:exon
so has part: feature:258777-258822:-1:exon
so has part: feature:258378-258487:-1:exon
so has part: feature:253464-253516:-1:exon
so has part: feature:251931-252016:-1:exon
so has part: feature:251319-251490:-1:exon
so has part: feature:250202-250403:-1:exon
so has part: feature:248779-249056:-1:exon
so has part: feature:248328-248500:-1:exon
so has part: feature:247458-247647:-1:exon
so has part: feature:246813-246867:-1:exon
so has part: feature:246195-246369:-1:exon
so has part: feature:245937-246009:-1:exon
so has part: feature:245097-245292:-1:exon
so has part: feature:244903-244991:-1:exon
so has part: feature:244195-244248:-1:exon
so has part: feature:243523-243604:-1:exon
so has part: feature:242198-242415:-1:exon
so has part: feature:242004-242109:-1:exon
so has part: feature:240795-240862:-1:exon
so has part: feature:240307-240504:-1:exon
so has part: feature:239797-239847:-1:exon
so has part: feature:239235-239330:-1:exon

XP_041576997.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:264687-264776:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:264046-264123:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:262868-262978:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:259932-260100:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:259528-259623:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:258777-258822:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:258378-258487:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:253464-253516:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:251931-252016:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:251319-251490:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:250202-250403:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:248779-249056:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:248328-248500:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:247458-247647:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:246813-246867:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:246195-246369:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:245937-246009:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:245097-245292:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:244903-244991:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:244195-244248:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:243523-243604:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:242198-242415:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:242004-242109:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:240795-240862:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:240307-240504:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:239797-239847:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:239235-239330:-1:exon

UBAP2L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: UBAP2L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-associated protein 2-like isoform X5
translation: MMTSVGTTRARGSWEQTQTQSQTQHKQRPQATAEQIRLAQMISDHNDADFEEKVKQLIDITGKNQDECVIALHDCNGDVNRAINVLLEGNPDTHSWEMVGKKKGVSGQKESGQTEPSEESKENRDRERDFSRRRGGLPRRGRGATRGREFRGQENGLDGAKSGGSSGRGTERGRRGRGRGRGGSGRRGGRFSAQGMGTFNPADYAEPASTDENYGNSNNTWNNTGSFEPDDGTRLDFIGGEGSNYPRKFDTAPGAWRAATEEWGTEDWNEDLSETKIFTASNVSSVPLPAENVTITAGQRIDLAVLLGKTPSSMENESTNLESSQTPSLAQPLVFSNSKQSALSQPASGNSFSHHSMVSMLGKGFGDVGEAKGSSTTGSQFLEQFKTAQALAQLAAQHTQPAGSTTAASWDMGSTTQTSSLVQYDLKNPTDSSVHSPFTKRQGFTSTSTMIEVFMQEKQPVVTASTTTPAPPSSPLPSKTNPVPQMSPGSSDNQSSSPQPAQQKLKQQKKKASLTSKIPALAVEMPGSSDISGLNLQFGALQFGSEPVLAEYESTPTTSAAVSQSQSSLYTSSASESSSTISSNQSQESGYQSGTIQTATFTSQNSAQGPLYEQRSTQTRRYPNSISSSPQKDLTQAKNGFSSVQPTPLQTTQAVEGATGPAVKSDSPSAPSIAPLNDGVSATSLLTTASQHSTALSSLSHSEELPSTTTAQLSSALPTQQNSLSSSTSSGRTSTSTLLHTSVESEASLHSSASTFSTSSSTVSAAPPVVSVSSSLSSVSSLGLSLSSNSTVTASTRSSVATTSGKAPPNLPPGVPPLLPNPYIMAPGLLHAYPPQVYGYDDLQMLQTRFPLDYYSIPFPTPTTPLTGRDGSLSSNPYSGDLTKFGRGDASSPAPATTLAQPQQSQTQTHHTTQQTFLNPALPPGYSYTSLPYYTGVPGLPSTFQYGPAVFPVAPTSSKQHGVNVSVNASATPFQQPSGYGSHGYSTGVSVTSSNTGVPDISGSVYSKTQQSFEKQGFHTGTPAASFNLPSALGSGGPINPATAAAYPPTPFMHILTPHQQPHSQILHHHLQQDGQSGSGQRSQGSSIPQKSQANKSAYNSYSWGAN
SIO_010081: UBAP2L
subclass of: SO_0000673
so part of: UBAP2L
location: complement(join(239235..239330,240307..240504,240795..240862,242004..242109,242198..242415,243523..243604,244195..244248,244903..244991,245097..245292,245937..246009,246195..246369,246813..246867,247458..247647,248328..248500,248779..249056,250202..250403,251319..251490,251931..252016,253464..253516,256808..256867,258378..258487,258777..258822,259528..259623,259932..260100,262868..262978,264046..264123,264687..264776))
location: region:239235-264776:-1
so has part: feature:264687-264776:-1:exon
so has part: feature:264046-264123:-1:exon
so has part: feature:262868-262978:-1:exon
so has part: feature:259932-260100:-1:exon
so has part: feature:259528-259623:-1:exon
so has part: feature:258777-258822:-1:exon
so has part: feature:258378-258487:-1:exon
so has part: feature:256808-256867:-1:exon
so has part: feature:253464-253516:-1:exon
so has part: feature:251931-252016:-1:exon
so has part: feature:251319-251490:-1:exon
so has part: feature:250202-250403:-1:exon
so has part: feature:248779-249056:-1:exon
so has part: feature:248328-248500:-1:exon
so has part: feature:247458-247647:-1:exon
so has part: feature:246813-246867:-1:exon
so has part: feature:246195-246369:-1:exon
so has part: feature:245937-246009:-1:exon
so has part: feature:245097-245292:-1:exon
so has part: feature:244903-244991:-1:exon
so has part: feature:244195-244248:-1:exon
so has part: feature:243523-243604:-1:exon
so has part: feature:242198-242415:-1:exon
so has part: feature:242004-242109:-1:exon
so has part: feature:240795-240862:-1:exon
so has part: feature:240307-240504:-1:exon
so has part: feature:239235-239330:-1:exon

XP_030147014.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:264687-264776:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:264046-264123:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:262868-262978:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:259932-260100:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:259528-259623:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:258777-258822:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:258378-258487:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:256808-256867:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:253464-253516:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:251931-252016:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:251319-251490:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:250202-250403:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:248779-249056:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:248328-248500:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:247458-247647:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:246813-246867:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:246195-246369:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:245937-246009:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:245097-245292:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:244903-244991:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:244195-244248:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:243523-243604:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:242198-242415:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:242004-242109:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:240795-240862:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:240307-240504:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:239235-239330:-1:exon

UBAP2L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: UBAP2L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-associated protein 2-like isoform X2
translation: MMTSVGTTRARGSWEQTQTQSQTQHKQRPQATAEQIRLAQMISDHNDADFEEKVKQLIDITGKNQDECVIALHDCNGDVNRAINVLLEGNPDTHSWEMVGKKKGVSGQKESGQTEPSEESKENRDRERDFSRRRGGLPRRGRGATRGREFRGQENGLDGAKSGGSSGRGTERGRRGRGRGRGGSGRRGGRFSAQGMGTFNPADYAEPASTDENYGNSNNTWNNTGSFEPDDGTRLDFIGGEGSNYPRKFDTAPGAWRAATEEWGTEDWNEDLSETKIFTASNVSSVPLPAENVTITAGQRIDLAVLLGKTPSSMENESTNLESSQTPSLAQPLVFSNSKQSALSQPASGNSFSHHSMVSMLGKGFGDVGEAKGSSTTGSQFLEQFKTAQALAQLAAQHTQPAGSTTAASWDMGSTTQTSSLVQYDLKNPTDSSVHSPFTKRQGFTSTSTMIEVFMQEKQPVVTASTTTPAPPSSPLPSKTNPVPQMSPGSSDNQSSSPQPAQQKLKQQKKKASLTSKIPALAVEMPGSSDISGLNLQFGALQFGSEPVLAEYESTPTTSAAVSQSQSSLYTSSASESSSTISSNQSQESGYQSGTIQTATFTSQNSAQGPLYEQRSTQTRRYPNSISSSPQKDLTQAKNGFSSVQPTPLQTTQAVEGATGPAVKSDSPSAPSIAPLNDGVSATSLLTTASQHSTALSSLSHSEELPSTTTAQLSSALPTQQNSLSSSTSSGRTSTSTLLHTSVESEASLHSSASTFSTSSSTVSAAPPVVSVSSSLSSVSSLGLSLSSNSTVTASTRSSVATTSGKAPPNLPPGVPPLLPNPYIMAPGLLHAYPPQVYGYDDLQMLQTRFPLDYYSIPFPTPTTPLTGRDGSLSSNPYSGDLTKFGRGDASSPAPATTLAQPQQSQTQTHHTTQQTFLNPALPPGYSYTSLPYYTGVPGLPSTFQYGPAVFPVAPTSSKQHGVNVSVNASATPFQQPSGYGSHGYSTGVSVTSSNTGVPDISGSVYSKTQQSFEKQGFHTGTPAASFNLPSALGSGGPINPATAAAYPPTPFMHILTPHQQPHSQILHHHLQQDGQLPYLQMILCCQRQQEDQSGSGQRSQGSSIPQKSQANKSAYNSYSWGAN
SIO_010081: UBAP2L
subclass of: SO_0000673
so part of: UBAP2L
location: complement(join(239235..239330,239797..239847,240307..240504,240795..240862,242004..242109,242198..242415,243523..243604,244195..244248,244903..244991,245097..245292,245937..246009,246195..246369,246813..246867,247458..247647,248328..248500,248779..249056,250202..250403,251319..251490,251931..252016,253464..253516,256808..256867,258378..258487,258777..258822,259528..259623,259932..260100,262868..262978,264046..264123,264687..264776))
location: region:239235-264776:-1
so has part: feature:264687-264776:-1:exon
so has part: feature:264046-264123:-1:exon
so has part: feature:262868-262978:-1:exon
so has part: feature:259932-260100:-1:exon
so has part: feature:259528-259623:-1:exon
so has part: feature:258777-258822:-1:exon
so has part: feature:258378-258487:-1:exon
so has part: feature:256808-256867:-1:exon
so has part: feature:253464-253516:-1:exon
so has part: feature:251931-252016:-1:exon
so has part: feature:251319-251490:-1:exon
so has part: feature:250202-250403:-1:exon
so has part: feature:248779-249056:-1:exon
so has part: feature:248328-248500:-1:exon
so has part: feature:247458-247647:-1:exon
so has part: feature:246813-246867:-1:exon
so has part: feature:246195-246369:-1:exon
so has part: feature:245937-246009:-1:exon
so has part: feature:245097-245292:-1:exon
so has part: feature:244903-244991:-1:exon
so has part: feature:244195-244248:-1:exon
so has part: feature:243523-243604:-1:exon
so has part: feature:242198-242415:-1:exon
so has part: feature:242004-242109:-1:exon
so has part: feature:240795-240862:-1:exon
so has part: feature:240307-240504:-1:exon
so has part: feature:239797-239847:-1:exon
so has part: feature:239235-239330:-1:exon

XP_041576994.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:264687-264776:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:264046-264123:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:262868-262978:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:259932-260100:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:259528-259623:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:258777-258822:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:258378-258487:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:256808-256867:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:253464-253516:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:251931-252016:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:251319-251490:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:250202-250403:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:248779-249056:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:248328-248500:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:247458-247647:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:246813-246867:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:246195-246369:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:245937-246009:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:245097-245292:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:244903-244991:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:244195-244248:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:243523-243604:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:242198-242415:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:242004-242109:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:240795-240862:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:240307-240504:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:239797-239847:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:239235-239330:-1:exon

UBAP2L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: UBAP2L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-associated protein 2-like isoform X4
translation: MMTSVGTTRARGSWEQTQTQSQTQHKQRPQATAEQIRLAQMISDHNDADFEEKVKQLIDITGKNQDECVIALHDCNGDVNRAINVLLEGNPDTHSWEMVGKKKGVSGQKESGQTEPSEESKENRDRERDFSRRRGGLPRRGRGATRGREFRGQENGLDGAKSGGSSGRGTERGRRGRGRGRGGSGRRGGRFSAQGMGTFNPADYAEPASTDENYGNSNNTWNNTGSFEPDDGTRLDFIGGEGSNYPRKFDTAPGTIHPGAWRAATEEWGTEDWNEDLSETKIFTASNVSSVPLPAENVTITAGQRIDLAVLLGKTPSSMENESTNLESSQTPSLAQPLVFSNSKQSALSQPASGNSFSHHSMVSMLGKGFGDVGEAKGSSTTGSQFLEQFKTAQALAQLAAQHTQPAGSTTAASWDMGSTTQTSSLVQYDLKNPTDSSVHSPFTKRQGFTSTSTMIEVFMQEKQPVVTASTTTPAPPSSPLPSKTNPVPQMSPGSSDNQSSSPQPAQQKLKQQKKKASLTSKIPALAVEMPGSSDISGLNLQFGALQFGSEPVLAEYESTPTTSAAVSQSQSSLYTSSASESSSTISSNQSQESGYQSGTIQTATFTSQNSAQGPLYEQRSTQTRRYPNSISSSPQKDLTQAKNGFSSVQPTPLQTTQAVEGATGPAVKSDSPSAPSIAPLNDGVSATSLLTTASQHSTALSSLSHSEELPSTTTAQLSSALPTQQNSLSSSTSSGRTSTSTLLHTSVESEASLHSSASTFSTSSSTVSAAPPVVSVSSSLSSVSSLGLSLSSNSTVTASTRSSVATTSGKAPPNLPPGVPPLLPNPYIMAPGLLHAYPPQVYGYDDLQMLQTRFPLDYYSIPFPTPTTPLTGRDGSLSSNPYSGDLTKFGRGDASSPAPATTLAQPQQSQTQTHHTTQQTFLNPALPPGYSYTSLPYYTGVPGLPSTFQYGPAVFPVAPTSSKQHGVNVSVNASATPFQQPSGYGSHGYSTGVSVTSSNTGVPDISGSVYSKTQQSFEKQGFHTGTPAASFNLPSALGSGGPINPATAAAYPPTPFMHILTPHQQPHSQILHHHLQQDGQSGSGQRSQGSSIPQKSQANKSAYNSYSWGAN
SIO_010081: UBAP2L
subclass of: SO_0000673
so part of: UBAP2L
location: complement(join(239235..239330,240307..240504,240795..240862,242004..242109,242198..242415,243523..243604,244195..244248,244903..244991,245097..245292,245937..246009,246195..246369,246813..246867,247458..247647,248328..248500,248779..249056,250202..250403,251319..251490,251931..252016,253464..253516,256793..256867,258378..258487,258777..258822,259528..259623,259932..260100,262868..262978,264046..264123,264687..264776))
location: region:239235-264776:-1
so has part: feature:264687-264776:-1:exon
so has part: feature:264046-264123:-1:exon
so has part: feature:262868-262978:-1:exon
so has part: feature:259932-260100:-1:exon
so has part: feature:259528-259623:-1:exon
so has part: feature:258777-258822:-1:exon
so has part: feature:258378-258487:-1:exon
so has part: feature:256793-256867:-1:exon
so has part: feature:253464-253516:-1:exon
so has part: feature:251931-252016:-1:exon
so has part: feature:251319-251490:-1:exon
so has part: feature:250202-250403:-1:exon
so has part: feature:248779-249056:-1:exon
so has part: feature:248328-248500:-1:exon
so has part: feature:247458-247647:-1:exon
so has part: feature:246813-246867:-1:exon
so has part: feature:246195-246369:-1:exon
so has part: feature:245937-246009:-1:exon
so has part: feature:245097-245292:-1:exon
so has part: feature:244903-244991:-1:exon
so has part: feature:244195-244248:-1:exon
so has part: feature:243523-243604:-1:exon
so has part: feature:242198-242415:-1:exon
so has part: feature:242004-242109:-1:exon
so has part: feature:240795-240862:-1:exon
so has part: feature:240307-240504:-1:exon
so has part: feature:239235-239330:-1:exon

XP_041576996.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:264687-264776:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:264046-264123:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:262868-262978:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:259932-260100:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:259528-259623:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:258777-258822:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:258378-258487:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:256793-256867:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:253464-253516:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:251931-252016:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:251319-251490:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:250202-250403:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:248779-249056:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:248328-248500:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:247458-247647:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:246813-246867:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:246195-246369:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:245937-246009:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:245097-245292:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:244903-244991:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:244195-244248:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:243523-243604:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:242198-242415:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:242004-242109:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:240795-240862:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:240307-240504:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:239235-239330:-1:exon

UBAP2L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: UBAP2L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-associated protein 2-like isoform X3
translation: MMTSVGTTRARGSWEQTQTQSQTQHKQRPQATAEQIRLAQMISDHNDADFEEKVKQLIDITGKNQDECVIALHDCNGDVNRAINVLLEGNPDTHSWEMVGKKKGVSGQKESGQTEPSEESKENRDRERDFSRRRGGLPRRGRGATRGREFRGQENGLDGAKSGGSSGRGTERGRRGRGRGRGGSGRRGGRFSAQGMGTFNPADYAEPASTDENYGNSNNTWNNTGSFEPDDGTRLDFIGGEGSNYPRKFDTAPGTIHPGAWRAATEEWGTEDWNEDLSETKIFTASNVSSVPLPAENVTITAGQRIDLAVLLGKTPSSMENESTNLESSQTPSLAQPLVFSNSKQSALSQPASGNSFSHHSMVSMLGKGFGDVGEAKGSSTTGSQFLEQFKTAQALAQLAAQHTQPAGSTTAASWDMGSTTQTSSLVQYDLKNPTDSSVHSPFTKRQGFTSTSTMIEVFMQEKQPVVTASTTTPAPPSSPLPSKTNPVPQMSPGSSDNQSSSPQPAQQKLKQQKKKASLTSKIPALAVEMPGSSDISGLNLQFGALQFGSEPVLAEYESTPTTSAAVSQSQSSLYTSSASESSSTISSNQSQESGYQSGTIQTATFTSQNSAQGPLYEQRSTQTRRYPNSISSSPQKDLTQAKNGFSSVQPTPLQTTQAVEGATGPAVKSDSPSAPSIAPLNDGVSATSLLTTASQHSTALSSLSHSEELPSTTTAQLSSALPTQQNSLSSSTSSGRTSTSTLLHTSVESEASLHSSASTFSTSSSTVSAAPPVVSVSSSLSSVSSLGLSLSSNSTVTASTRSSVATTSGKAPPNLPPGVPPLLPNPYIMAPGLLHAYPPQVYGYDDLQMLQTRFPLDYYSIPFPTPTTPLTGRDGSLSSNPYSGDLTKFGRGDASSPAPATTLAQPQQSQTQTHHTTQQTFLNPALPPGYSYTSLPYYTGVPGLPSTFQYGPAVFPVAPTSSKQHGVNVSVNASATPFQQPSGYGSHGYSTGVSVTSSNTGVPDISGSVYSKTQQSFEKQGFHTGTPAASFNLPSALGSGGPINPATAAAYPPTPFMHILTPHQQPHSQILHHHLQQDGQMILCCQRQQEDQSGSGQRSQGSSIPQKSQANKSAYNSYSWGAN
SIO_010081: UBAP2L
subclass of: SO_0000673
so part of: UBAP2L
location: complement(join(239235..239330,239797..239832,240307..240504,240795..240862,242004..242109,242198..242415,243523..243604,244195..244248,244903..244991,245097..245292,245937..246009,246195..246369,246813..246867,247458..247647,248328..248500,248779..249056,250202..250403,251319..251490,251931..252016,253464..253516,256793..256867,258378..258487,258777..258822,259528..259623,259932..260100,262868..262978,264046..264123,264687..264776))
location: region:239235-264776:-1
so has part: feature:264687-264776:-1:exon
so has part: feature:264046-264123:-1:exon
so has part: feature:262868-262978:-1:exon
so has part: feature:259932-260100:-1:exon
so has part: feature:259528-259623:-1:exon
so has part: feature:258777-258822:-1:exon
so has part: feature:258378-258487:-1:exon
so has part: feature:256793-256867:-1:exon
so has part: feature:253464-253516:-1:exon
so has part: feature:251931-252016:-1:exon
so has part: feature:251319-251490:-1:exon
so has part: feature:250202-250403:-1:exon
so has part: feature:248779-249056:-1:exon
so has part: feature:248328-248500:-1:exon
so has part: feature:247458-247647:-1:exon
so has part: feature:246813-246867:-1:exon
so has part: feature:246195-246369:-1:exon
so has part: feature:245937-246009:-1:exon
so has part: feature:245097-245292:-1:exon
so has part: feature:244903-244991:-1:exon
so has part: feature:244195-244248:-1:exon
so has part: feature:243523-243604:-1:exon
so has part: feature:242198-242415:-1:exon
so has part: feature:242004-242109:-1:exon
so has part: feature:240795-240862:-1:exon
so has part: feature:240307-240504:-1:exon
so has part: feature:239797-239832:-1:exon
so has part: feature:239235-239330:-1:exon

XP_041576995.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:264687-264776:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:264046-264123:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:262868-262978:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:259932-260100:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:259528-259623:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:258777-258822:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:258378-258487:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:256793-256867:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:253464-253516:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:251931-252016:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:251319-251490:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:250202-250403:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:248779-249056:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:248328-248500:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:247458-247647:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:246813-246867:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:246195-246369:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:245937-246009:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:245097-245292:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:244903-244991:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:244195-244248:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:243523-243604:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:242198-242415:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:242004-242109:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:240795-240862:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:240307-240504:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:239797-239832:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:239235-239330:-1:exon

UBAP2L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: UBAP2L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-associated protein 2-like isoform X1
translation: MMTSVGTTRARGSWEQTQTQSQTQHKQRPQATAEQIRLAQMISDHNDADFEEKVKQLIDITGKNQDECVIALHDCNGDVNRAINVLLEGNPDTHSWEMVGKKKGVSGQKESGQTEPSEESKENRDRERDFSRRRGGLPRRGRGATRGREFRGQENGLDGAKSGGSSGRGTERGRRGRGRGRGGSGRRGGRFSAQGMGTFNPADYAEPASTDENYGNSNNTWNNTGSFEPDDGTRLDFIGGEGSNYPRKFDTAPGTIHPGAWRAATEEWGTEDWNEDLSETKIFTASNVSSVPLPAENVTITAGQRIDLAVLLGKTPSSMENESTNLESSQTPSLAQPLVFSNSKQSALSQPASGNSFSHHSMVSMLGKGFGDVGEAKGSSTTGSQFLEQFKTAQALAQLAAQHTQPAGSTTAASWDMGSTTQTSSLVQYDLKNPTDSSVHSPFTKRQGFTSTSTMIEVFMQEKQPVVTASTTTPAPPSSPLPSKTNPVPQMSPGSSDNQSSSPQPAQQKLKQQKKKASLTSKIPALAVEMPGSSDISGLNLQFGALQFGSEPVLAEYESTPTTSAAVSQSQSSLYTSSASESSSTISSNQSQESGYQSGTIQTATFTSQNSAQGPLYEQRSTQTRRYPNSISSSPQKDLTQAKNGFSSVQPTPLQTTQAVEGATGPAVKSDSPSAPSIAPLNDGVSATSLLTTASQHSTALSSLSHSEELPSTTTAQLSSALPTQQNSLSSSTSSGRTSTSTLLHTSVESEASLHSSASTFSTSSSTVSAAPPVVSVSSSLSSVSSLGLSLSSNSTVTASTRSSVATTSGKAPPNLPPGVPPLLPNPYIMAPGLLHAYPPQVYGYDDLQMLQTRFPLDYYSIPFPTPTTPLTGRDGSLSSNPYSGDLTKFGRGDASSPAPATTLAQPQQSQTQTHHTTQQTFLNPALPPGYSYTSLPYYTGVPGLPSTFQYGPAVFPVAPTSSKQHGVNVSVNASATPFQQPSGYGSHGYSTGVSVTSSNTGVPDISGSVYSKTQQSFEKQGFHTGTPAASFNLPSALGSGGPINPATAAAYPPTPFMHILTPHQQPHSQILHHHLQQDGQLPYLQMILCCQRQQEDQSGSGQRSQGSSIPQKSQANKSAYNSYSWGAN
SIO_010081: UBAP2L
subclass of: SO_0000673
so part of: UBAP2L
location: complement(join(239235..239330,239797..239847,240307..240504,240795..240862,242004..242109,242198..242415,243523..243604,244195..244248,244903..244991,245097..245292,245937..246009,246195..246369,246813..246867,247458..247647,248328..248500,248779..249056,250202..250403,251319..251490,251931..252016,253464..253516,256793..256867,258378..258487,258777..258822,259528..259623,259932..260100,262868..262978,264046..264123,264687..264776))
location: region:239235-264776:-1
so has part: feature:264687-264776:-1:exon
so has part: feature:264046-264123:-1:exon
so has part: feature:262868-262978:-1:exon
so has part: feature:259932-260100:-1:exon
so has part: feature:259528-259623:-1:exon
so has part: feature:258777-258822:-1:exon
so has part: feature:258378-258487:-1:exon
so has part: feature:256793-256867:-1:exon
so has part: feature:253464-253516:-1:exon
so has part: feature:251931-252016:-1:exon
so has part: feature:251319-251490:-1:exon
so has part: feature:250202-250403:-1:exon
so has part: feature:248779-249056:-1:exon
so has part: feature:248328-248500:-1:exon
so has part: feature:247458-247647:-1:exon
so has part: feature:246813-246867:-1:exon
so has part: feature:246195-246369:-1:exon
so has part: feature:245937-246009:-1:exon
so has part: feature:245097-245292:-1:exon
so has part: feature:244903-244991:-1:exon
so has part: feature:244195-244248:-1:exon
so has part: feature:243523-243604:-1:exon
so has part: feature:242198-242415:-1:exon
so has part: feature:242004-242109:-1:exon
so has part: feature:240795-240862:-1:exon
so has part: feature:240307-240504:-1:exon
so has part: feature:239797-239847:-1:exon
so has part: feature:239235-239330:-1:exon

XP_032608876.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:264687-264776:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:264046-264123:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:262868-262978:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:259932-260100:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:259528-259623:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:258777-258822:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:258378-258487:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:256793-256867:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:253464-253516:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:251931-252016:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:251319-251490:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:250202-250403:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:248779-249056:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:248328-248500:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:247458-247647:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:246813-246867:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:246195-246369:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:245937-246009:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:245097-245292:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:244903-244991:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:244195-244248:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:243523-243604:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:242198-242415:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:242004-242109:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:240795-240862:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:240307-240504:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:239797-239847:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:239235-239330:-1:exon

C25H1orf43
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: C25H1orf43
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 268738..271882
location: region:268738-271882:1
so has part: feature:268738-271882:1:exon
subclass of: SO_0000010

100225964
type: Gene
SIO_000068: ncbigene

position:268738:1
position: 268738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:271882:1
position: 271882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:268738-271882:1:exon

C25H1orf43
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: C25H1orf43
product: chromosome 25 C1orf43 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 17 ESTs, 7 long SRA reads, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 164 samples with support for all annotated introns
transcript id: XM_041721064.1
SIO_010081: C25H1orf43
subclass of: SO_0000673
so part of: C25H1orf43
location: join(268738..268900,269263..269364,269557..269665,269835..269888,270148..270314,270430..270488,270872..271882)
location: region:268738-271882:1
so has part: feature:268738-268900:1:exon
so has part: feature:269263-269364:1:exon
so has part: feature:269557-269665:1:exon
so has part: feature:269835-269888:1:exon
so has part: feature:270148-270314:1:exon
so has part: feature:270430-270488:1:exon
so has part: feature:270872-271882:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:268738-268900:1:exon

position:268900:1
position: 268900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:269263-269364:1:exon

position:269263:1
position: 269263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:269364:1
position: 269364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:269557-269665:1:exon

position:269557:1
position: 269557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:269665:1
position: 269665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:269835-269888:1:exon

position:269835:1
position: 269835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:269888:1
position: 269888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:270148-270314:1:exon

position:270148:1
position: 270148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:270314:1
position: 270314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:270430-270488:1:exon

position:270430:1
position: 270430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:270488:1
position: 270488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:270872-271882:1:exon

position:270872:1
position: 270872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

C25H1orf43
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: C25H1orf43
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein C1orf43 homolog
translation: MAGAGSNWLSGVNVVLVMAYGSLVFVLLFIFVKRQIMRFAMKSRRGPHVPVGQHAPKDLKEEIDIRLSRVQDIKYEPQLLAEDDGRLLQLETPGCYNYLYRMKALDAIRTSEIPFQAEGRYPKSLIGKNFCAYLLELRNSSASFKGIRKALIDTLLDGYESARYGTGVFGKTEYLKYEEALNELANITKARGGSSQRQHQSAVKDLTLSPEVSNPTTIQVTYLPSSQKSKRAKHFLELKSFKDNYNTLESTL
SIO_010081: C25H1orf43
subclass of: SO_0000673
so part of: C25H1orf43
location: join(268832..268900,269263..269364,269557..269665,269835..269888,270148..270314,270430..270488,270872..271070)
location: region:268832-271070:1
so has part: feature:268832-268900:1:exon
so has part: feature:269263-269364:1:exon
so has part: feature:269557-269665:1:exon
so has part: feature:269835-269888:1:exon
so has part: feature:270148-270314:1:exon
so has part: feature:270430-270488:1:exon
so has part: feature:270872-271070:1:exon

XP_041576998.1
type: Protein
SIO_000068: ncbiprotein

position:268832:1
position: 268832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:271070:1
position: 271070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:268832-268900:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:269263-269364:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:269557-269665:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:269835-269888:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:270148-270314:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:270430-270488:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:270872-271070:1:exon

C25H1orf189
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: C25H1orf189
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 271976..272995
location: region:271976-272995:1
so has part: feature:271976-272995:1:exon
subclass of: SO_0000010

115498375
type: Gene
SIO_000068: ncbigene

position:271976:1
position: 271976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:272995:1
position: 272995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:271976-272995:1:exon

C25H1orf189
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: C25H1orf189
product: chromosome 25 C1orf189 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030291159.3
SIO_010081: C25H1orf189
subclass of: SO_0000673
so part of: C25H1orf189
location: join(271976..272227,272350..272390,272525..272657,272820..272995)
location: region:271976-272995:1
so has part: feature:271976-272227:1:exon
so has part: feature:272350-272390:1:exon
so has part: feature:272525-272657:1:exon
so has part: feature:272820-272995:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:271976-272227:1:exon

position:272227:1
position: 272227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:272350-272390:1:exon

position:272350:1
position: 272350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:272390:1
position: 272390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:272525-272657:1:exon

position:272525:1
position: 272525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:272657:1
position: 272657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:272820-272995:1:exon

position:272820:1
position: 272820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

C25H1orf189
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: C25H1orf189
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C1orf189 homolog
translation: MPLMVASTLPLLLWWPRCRDSRWHTVMVTRWHRNSNWEAVTVTRTPLLPGCSINTLALAGAVAASLALAMAAPNSQSSSLQQEEVQANGSAGARLLRSCGQGAREHPKCWASSLGVLQWIMESRLKKRVDLELHLAGREQAAIRRDALCQLVLDEHLQHQQELRQQGKAFYVERL
SIO_010081: C25H1orf189
subclass of: SO_0000673
so part of: C25H1orf189
location: join(271976..272227,272350..272390,272525..272657,272820..272921)
location: region:271976-272921:1
so has part: feature:271976-272227:1:exon
so has part: feature:272350-272390:1:exon
so has part: feature:272525-272657:1:exon
so has part: feature:272820-272921:1:exon

XP_030147019.3
type: Protein
SIO_000068: ncbiprotein

position:272921:1
position: 272921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:271976-272227:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:272350-272390:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:272525-272657:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:272820-272921:1:exon

TPM3
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: TPM3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 276019..295168
location: region:276019-295168:1
so has part: feature:276019-295168:1:exon
subclass of: SO_0000010

100228823
type: Gene
SIO_000068: ncbigene

position:276019:1
position: 276019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:295168:1
position: 295168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:276019-295168:1:exon

TPM3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: TPM3
product: tropomyosin 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030291708.3
SIO_010081: TPM3
subclass of: SO_0000673
so part of: TPM3
location: join(276019..276212,276576..276701,282413..282546,283359..283476,283698..283768,284562..284637,285681..285743,285892..285961,287726..287804,289594..289657,293383..294053)
location: region:276019-294053:1
so has part: feature:276019-276212:1:exon
so has part: feature:276576-276701:1:exon
so has part: feature:282413-282546:1:exon
so has part: feature:283359-283476:1:exon
so has part: feature:283698-283768:1:exon
so has part: feature:284562-284637:1:exon
so has part: feature:285681-285743:1:exon
so has part: feature:285892-285961:1:exon
so has part: feature:287726-287804:1:exon
so has part: feature:289594-289657:1:exon
so has part: feature:293383-294053:1:exon

position:294053:1
position: 294053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:276019-276212:1:exon

position:276212:1
position: 276212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:276576-276701:1:exon

position:276576:1
position: 276576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:276701:1
position: 276701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:282413-282546:1:exon

position:282413:1
position: 282413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:282546:1
position: 282546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:283359-283476:1:exon

position:283359:1
position: 283359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:283476:1
position: 283476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:283698-283768:1:exon

position:283698:1
position: 283698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:283768:1
position: 283768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:284562-284637:1:exon

position:284562:1
position: 284562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:284637:1
position: 284637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:285681-285743:1:exon

position:285681:1
position: 285681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:285743:1
position: 285743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:285892-285961:1:exon

position:285892:1
position: 285892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:285961:1
position: 285961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:287726-287804:1:exon

position:287726:1
position: 287726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:287804:1
position: 287804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:289594-289657:1:exon

position:289594:1
position: 289594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:289657:1
position: 289657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:293383-294053:1:exon

position:293383:1
position: 293383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TPM3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: TPM3
product: tropomyosin 3, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030291715.3
SIO_010081: TPM3
subclass of: SO_0000673
so part of: TPM3
location: join(276024..276212,276576..276701,282413..282546,283359..283476,283698..283768,284562..284637,285681..285743,285892..285961,287726..287804,294012..295168)
location: region:276024-295168:1
so has part: feature:276024-276212:1:exon
so has part: feature:276576-276701:1:exon
so has part: feature:282413-282546:1:exon
so has part: feature:283359-283476:1:exon
so has part: feature:283698-283768:1:exon
so has part: feature:284562-284637:1:exon
so has part: feature:285681-285743:1:exon
so has part: feature:285892-285961:1:exon
so has part: feature:287726-287804:1:exon
so has part: feature:294012-295168:1:exon

position:276024:1
position: 276024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:276024-276212:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:276576-276701:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:282413-282546:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:283359-283476:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:283698-283768:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:284562-284637:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:285681-285743:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:285892-285961:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:287726-287804:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:294012-295168:1:exon

position:294012:1
position: 294012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TPM3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: TPM3
product: tropomyosin 3, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_012570839.4
SIO_010081: TPM3
subclass of: SO_0000673
so part of: TPM3
location: join(276024..276212,276576..276701,282413..282546,283359..283476,283698..283768,284562..284637,285681..285743,285892..285961,287726..287808)
location: region:276024-287808:1
so has part: feature:276024-276212:1:exon
so has part: feature:276576-276701:1:exon
so has part: feature:282413-282546:1:exon
so has part: feature:283359-283476:1:exon
so has part: feature:283698-283768:1:exon
so has part: feature:284562-284637:1:exon
so has part: feature:285681-285743:1:exon
so has part: feature:285892-285961:1:exon
so has part: feature:287726-287808:1:exon

position:287808:1
position: 287808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:276024-276212:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:276576-276701:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:282413-282546:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:283359-283476:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:283698-283768:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:284562-284637:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:285681-285743:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:285892-285961:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:287726-287808:1:exon

TPM3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: TPM3
product: tropomyosin 3, transcript variant X20
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030291707.3
SIO_010081: TPM3
subclass of: SO_0000673
so part of: TPM3
location: join(276025..276212,276576..276701,282413..282546,283359..283476,283698..283768,285133..285208,285681..285743,285892..285961,287726..287804,289594..289657,293383..294053)
location: region:276025-294053:1
so has part: feature:276025-276212:1:exon
so has part: feature:276576-276701:1:exon
so has part: feature:282413-282546:1:exon
so has part: feature:283359-283476:1:exon
so has part: feature:283698-283768:1:exon
so has part: feature:285133-285208:1:exon
so has part: feature:285681-285743:1:exon
so has part: feature:285892-285961:1:exon
so has part: feature:287726-287804:1:exon
so has part: feature:289594-289657:1:exon
so has part: feature:293383-294053:1:exon

position:276025:1
position: 276025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:276025-276212:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:276576-276701:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:282413-282546:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:283359-283476:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:283698-283768:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:285133-285208:1:exon

position:285133:1
position: 285133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:285208:1
position: 285208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:285681-285743:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:285892-285961:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:287726-287804:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:289594-289657:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:293383-294053:1:exon

TPM3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: TPM3
product: tropomyosin 3, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_002189318.5
SIO_010081: TPM3
subclass of: SO_0000673
so part of: TPM3
location: join(276026..276212,276576..276701,282413..282546,283359..283476,283698..283768,284562..284637,285681..285743,285892..285961,294012..295168)
location: region:276026-295168:1
so has part: feature:276026-276212:1:exon
so has part: feature:276576-276701:1:exon
so has part: feature:282413-282546:1:exon
so has part: feature:283359-283476:1:exon
so has part: feature:283698-283768:1:exon
so has part: feature:284562-284637:1:exon
so has part: feature:285681-285743:1:exon
so has part: feature:285892-285961:1:exon
so has part: feature:294012-295168:1:exon

position:276026:1
position: 276026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:276026-276212:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:276576-276701:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:282413-282546:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:283359-283476:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:283698-283768:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:284562-284637:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:285681-285743:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:285892-285961:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:294012-295168:1:exon

TPM3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: TPM3
product: tropomyosin 3, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030291716.3
SIO_010081: TPM3
subclass of: SO_0000673
so part of: TPM3
location: join(276026..276212,276576..276701,282413..282546,283359..283476,283698..283768,285133..285208,285681..285743,285892..285961,292539..293073)
location: region:276026-293073:1
so has part: feature:276026-276212:1:exon
so has part: feature:276576-276701:1:exon
so has part: feature:282413-282546:1:exon
so has part: feature:283359-283476:1:exon
so has part: feature:283698-283768:1:exon
so has part: feature:285133-285208:1:exon
so has part: feature:285681-285743:1:exon
so has part: feature:285892-285961:1:exon
so has part: feature:292539-293073:1:exon

position:293073:1
position: 293073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:276026-276212:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:276576-276701:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:282413-282546:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:283359-283476:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:283698-283768:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:285133-285208:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:285681-285743:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:285892-285961:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:292539-293073:1:exon

position:292539:1
position: 292539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TPM3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: TPM3
product: tropomyosin 3, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 19 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030291713.3
SIO_010081: TPM3
subclass of: SO_0000673
so part of: TPM3
location: join(276027..276212,276576..276701,282413..282546,283359..283476,283698..283768,285133..285208,285681..285743,285892..285961,287726..287804,294012..295168)
location: region:276027-295168:1
so has part: feature:276027-276212:1:exon
so has part: feature:276576-276701:1:exon
so has part: feature:282413-282546:1:exon
so has part: feature:283359-283476:1:exon
so has part: feature:283698-283768:1:exon
so has part: feature:285133-285208:1:exon
so has part: feature:285681-285743:1:exon
so has part: feature:285892-285961:1:exon
so has part: feature:287726-287804:1:exon
so has part: feature:294012-295168:1:exon

position:276027:1
position: 276027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:276027-276212:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:276576-276701:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:282413-282546:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:283359-283476:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:283698-283768:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:285133-285208:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:285681-285743:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:285892-285961:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:287726-287804:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:294012-295168:1:exon

TPM3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: TPM3
product: tropomyosin 3, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 8 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030291714.3
SIO_010081: TPM3
subclass of: SO_0000673
so part of: TPM3
location: join(276027..276212,276576..276701,282413..282546,283359..283476,283698..283768,285133..285208,285681..285743,285892..285961,287726..287804,288456..288804)
location: region:276027-288804:1
so has part: feature:276027-276212:1:exon
so has part: feature:276576-276701:1:exon
so has part: feature:282413-282546:1:exon
so has part: feature:283359-283476:1:exon
so has part: feature:283698-283768:1:exon
so has part: feature:285133-285208:1:exon
so has part: feature:285681-285743:1:exon
so has part: feature:285892-285961:1:exon
so has part: feature:287726-287804:1:exon
so has part: feature:288456-288804:1:exon

position:288804:1
position: 288804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:276027-276212:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:276576-276701:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:282413-282546:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:283359-283476:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:283698-283768:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:285133-285208:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:285681-285743:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:285892-285961:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:287726-287804:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:288456-288804:1:exon

position:288456:1
position: 288456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TPM3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: TPM3
product: tropomyosin 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 ESTs, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_002188932.5
SIO_010081: TPM3
subclass of: SO_0000673
so part of: TPM3
location: join(276028..276212,276576..276701,282413..282546,283359..283476,283698..283768,285133..285208,285681..285743,285892..285961,294012..295168)
location: region:276028-295168:1
so has part: feature:276028-276212:1:exon
so has part: feature:276576-276701:1:exon
so has part: feature:282413-282546:1:exon
so has part: feature:283359-283476:1:exon
so has part: feature:283698-283768:1:exon
so has part: feature:285133-285208:1:exon
so has part: feature:285681-285743:1:exon
so has part: feature:285892-285961:1:exon
so has part: feature:294012-295168:1:exon

position:276028:1
position: 276028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:276028-276212:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:276576-276701:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:282413-282546:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:283359-283476:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:283698-283768:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:285133-285208:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:285681-285743:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:285892-285961:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:294012-295168:1:exon

TPM3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: TPM3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-3 chain isoform X7
translation: MEAIKKKMQMLKLDKENALDRAEQAEAEQKQAEERSKQLEDELAAMQKKLKGTEDELDKYSEALKDAQEKLELAEKKAADAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERTEERAELAESHCRELREQIRVMDQNLKCLSVAEEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEDKLKSTKEEHLCTQRMLDQTLLDLNEM
SIO_010081: TPM3
subclass of: SO_0000673
so part of: TPM3
location: join(276099..276212,276576..276701,282413..282546,283359..283476,283698..283768,284562..284637,285681..285743,285892..285961,294012..294094)
location: region:276099-294094:1
so has part: feature:276099-276212:1:exon
so has part: feature:276576-276701:1:exon
so has part: feature:282413-282546:1:exon
so has part: feature:283359-283476:1:exon
so has part: feature:283698-283768:1:exon
so has part: feature:284562-284637:1:exon
so has part: feature:285681-285743:1:exon
so has part: feature:285892-285961:1:exon
so has part: feature:294012-294094:1:exon

XP_002189354.2
type: Protein
SIO_000068: ncbiprotein

position:276099:1
position: 276099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:294094:1
position: 294094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:276099-276212:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:276576-276701:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:282413-282546:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:283359-283476:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:283698-283768:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:284562-284637:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:285681-285743:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:285892-285961:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:294012-294094:1:exon

TPM3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: TPM3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-3 chain isoform X4
translation: MEAIKKKMQMLKLDKENALDRAEQAEAEQKQAEERSKQLEDELAAMQKKLKGTEDELDKYSEALKDAQEKLELAEKKAADAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERTEERAELAESKCSELEEELKNVTNNLKSLEAQAEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEDKLKSTKEEHLCTQRMLDQTLLDLNEM
SIO_010081: TPM3
subclass of: SO_0000673
so part of: TPM3
location: join(276099..276212,276576..276701,282413..282546,283359..283476,283698..283768,285133..285208,285681..285743,285892..285961,294012..294094)
location: region:276099-294094:1
so has part: feature:276099-276212:1:exon
so has part: feature:276576-276701:1:exon
so has part: feature:282413-282546:1:exon
so has part: feature:283359-283476:1:exon
so has part: feature:283698-283768:1:exon
so has part: feature:285133-285208:1:exon
so has part: feature:285681-285743:1:exon
so has part: feature:285892-285961:1:exon
so has part: feature:294012-294094:1:exon

XP_002188968.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:276099-276212:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:276576-276701:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:282413-282546:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:283359-283476:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:283698-283768:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:285133-285208:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:285681-285743:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:285892-285961:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:294012-294094:1:exon

TPM3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: TPM3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-3 chain isoform X8
translation: MEAIKKKMQMLKLDKENALDRAEQAEAEQKQAEERSKQLEDELAAMQKKLKGTEDELDKYSEALKDAQEKLELAEKKAADAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERTEERAELAESHCRELREQIRVMDQNLKCLSVAEEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDMTSI
SIO_010081: TPM3
subclass of: SO_0000673
so part of: TPM3
location: join(276099..276212,276576..276701,282413..282546,283359..283476,283698..283768,284562..284637,285681..285743,285892..285961,287726..287804,294012..294015)
location: region:276099-294015:1
so has part: feature:276099-276212:1:exon
so has part: feature:276576-276701:1:exon
so has part: feature:282413-282546:1:exon
so has part: feature:283359-283476:1:exon
so has part: feature:283698-283768:1:exon
so has part: feature:284562-284637:1:exon
so has part: feature:285681-285743:1:exon
so has part: feature:285892-285961:1:exon
so has part: feature:287726-287804:1:exon
so has part: feature:294012-294015:1:exon

XP_030147575.1
type: Protein
SIO_000068: ncbiprotein

position:294015:1
position: 294015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:276099-276212:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:276576-276701:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:282413-282546:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:283359-283476:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:283698-283768:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:284562-284637:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:285681-285743:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:285892-285961:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:287726-287804:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:294012-294015:1:exon

TPM3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: TPM3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-3 chain isoform X5
translation: MEAIKKKMQMLKLDKENALDRAEQAEAEQKQAEERSKQLEDELAAMQKKLKGTEDELDKYSEALKDAQEKLELAEKKAADAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERTEERAELAESKCSELEEELKNVTNNLKSLEAQAEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDMTSI
SIO_010081: TPM3
subclass of: SO_0000673
so part of: TPM3
location: join(276099..276212,276576..276701,282413..282546,283359..283476,283698..283768,285133..285208,285681..285743,285892..285961,287726..287804,294012..294015)
location: region:276099-294015:1
so has part: feature:276099-276212:1:exon
so has part: feature:276576-276701:1:exon
so has part: feature:282413-282546:1:exon
so has part: feature:283359-283476:1:exon
so has part: feature:283698-283768:1:exon
so has part: feature:285133-285208:1:exon
so has part: feature:285681-285743:1:exon
so has part: feature:285892-285961:1:exon
so has part: feature:287726-287804:1:exon
so has part: feature:294012-294015:1:exon

XP_030147573.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:276099-276212:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:276576-276701:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:282413-282546:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:283359-283476:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:283698-283768:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:285133-285208:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:285681-285743:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:285892-285961:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:287726-287804:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:294012-294015:1:exon

TPM3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: TPM3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-3 chain isoform X1
translation: MEAIKKKMQMLKLDKENALDRAEQAEAEQKQAEERSKQLEDELAAMQKKLKGTEDELDKYSEALKDAQEKLELAEKKAADAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERTEERAELAESHCRELREQIRVMDQNLKCLSVAEEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDMTSIARRALREQSSDDMGHFPWLSQPVCPVSQRVDVSSDMGGLTFGVKPT
SIO_010081: TPM3
subclass of: SO_0000673
so part of: TPM3
location: join(276099..276212,276576..276701,282413..282546,283359..283476,283698..283768,284562..284637,285681..285743,285892..285961,287726..287804,289594..289657,293383..293460)
location: region:276099-293460:1
so has part: feature:276099-276212:1:exon
so has part: feature:276576-276701:1:exon
so has part: feature:282413-282546:1:exon
so has part: feature:283359-283476:1:exon
so has part: feature:283698-283768:1:exon
so has part: feature:284562-284637:1:exon
so has part: feature:285681-285743:1:exon
so has part: feature:285892-285961:1:exon
so has part: feature:287726-287804:1:exon
so has part: feature:289594-289657:1:exon
so has part: feature:293383-293460:1:exon

XP_030147568.1
type: Protein
SIO_000068: ncbiprotein

position:293460:1
position: 293460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:276099-276212:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:276576-276701:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:282413-282546:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:283359-283476:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:283698-283768:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:284562-284637:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:285681-285743:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:285892-285961:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:287726-287804:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:289594-289657:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:293383-293460:1:exon

TPM3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: TPM3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-3 chain isoform X20
translation: MEAIKKKMQMLKLDKENALDRAEQAEAEQKQAEERSKQLEDELAAMQKKLKGTEDELDKYSEALKDAQEKLELAEKKAADAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERTEERAELAESKCSELEEELKNVTNNLKSLEAQAEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDMTSIARRALREQSSDDMGHFPWLSQPVCPVSQRVDVSSDMGGLTFGVKPT
SIO_010081: TPM3
subclass of: SO_0000673
so part of: TPM3
location: join(276099..276212,276576..276701,282413..282546,283359..283476,283698..283768,285133..285208,285681..285743,285892..285961,287726..287804,289594..289657,293383..293460)
location: region:276099-293460:1
so has part: feature:276099-276212:1:exon
so has part: feature:276576-276701:1:exon
so has part: feature:282413-282546:1:exon
so has part: feature:283359-283476:1:exon
so has part: feature:283698-283768:1:exon
so has part: feature:285133-285208:1:exon
so has part: feature:285681-285743:1:exon
so has part: feature:285892-285961:1:exon
so has part: feature:287726-287804:1:exon
so has part: feature:289594-289657:1:exon
so has part: feature:293383-293460:1:exon

XP_030147567.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:276099-276212:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:276576-276701:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:282413-282546:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:283359-283476:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:283698-283768:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:285133-285208:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:285681-285743:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:285892-285961:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:287726-287804:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:289594-289657:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:293383-293460:1:exon

TPM3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: TPM3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-3 chain isoform X10
translation: MEAIKKKMQMLKLDKENALDRAEQAEAEQKQAEERSKQLEDELAAMQKKLKGTEDELDKYSEALKDAQEKLELAEKKAADAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERTEERAELAESKCSELEEELKNVTNNLKSLEAQAEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEERLYSQLEKNRLLSNELKLMLHDLCD
SIO_010081: TPM3
subclass of: SO_0000673
so part of: TPM3
location: join(276099..276212,276576..276701,282413..282546,283359..283476,283698..283768,285133..285208,285681..285743,285892..285961,292539..292618)
location: region:276099-292618:1
so has part: feature:276099-276212:1:exon
so has part: feature:276576-276701:1:exon
so has part: feature:282413-282546:1:exon
so has part: feature:283359-283476:1:exon
so has part: feature:283698-283768:1:exon
so has part: feature:285133-285208:1:exon
so has part: feature:285681-285743:1:exon
so has part: feature:285892-285961:1:exon
so has part: feature:292539-292618:1:exon

XP_030147576.1
type: Protein
SIO_000068: ncbiprotein

position:292618:1
position: 292618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:276099-276212:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:276576-276701:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:282413-282546:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:283359-283476:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:283698-283768:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:285133-285208:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:285681-285743:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:285892-285961:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:292539-292618:1:exon

TPM3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: TPM3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-3 chain isoform X6
translation: MEAIKKKMQMLKLDKENALDRAEQAEAEQKQAEERSKQLEDELAAMQKKLKGTEDELDKYSEALKDAQEKLELAEKKAADAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERTEERAELAESKCSELEEELKNVTNNLKSLEAQAEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDMTSI
SIO_010081: TPM3
subclass of: SO_0000673
so part of: TPM3
location: join(276099..276212,276576..276701,282413..282546,283359..283476,283698..283768,285133..285208,285681..285743,285892..285961,287726..287804,288456..288459)
location: region:276099-288459:1
so has part: feature:276099-276212:1:exon
so has part: feature:276576-276701:1:exon
so has part: feature:282413-282546:1:exon
so has part: feature:283359-283476:1:exon
so has part: feature:283698-283768:1:exon
so has part: feature:285133-285208:1:exon
so has part: feature:285681-285743:1:exon
so has part: feature:285892-285961:1:exon
so has part: feature:287726-287804:1:exon
so has part: feature:288456-288459:1:exon

XP_030147574.1
type: Protein
SIO_000068: ncbiprotein

position:288459:1
position: 288459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:276099-276212:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:276576-276701:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:282413-282546:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:283359-283476:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:283698-283768:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:285133-285208:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:285681-285743:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:285892-285961:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:287726-287804:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:288456-288459:1:exon

TPM3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: TPM3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-3 chain isoform X9
translation: MEAIKKKMQMLKLDKENALDRAEQAEAEQKQAEERSKQLEDELAAMQKKLKGTEDELDKYSEALKDAQEKLELAEKKAADAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERTEERAELAESHCRELREQIRVMDQNLKCLSVAEEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDMTSM
SIO_010081: TPM3
subclass of: SO_0000673
so part of: TPM3
location: join(276099..276212,276576..276701,282413..282546,283359..283476,283698..283768,284562..284637,285681..285743,285892..285961,287726..287808)
location: region:276099-287808:1
so has part: feature:276099-276212:1:exon
so has part: feature:276576-276701:1:exon
so has part: feature:282413-282546:1:exon
so has part: feature:283359-283476:1:exon
so has part: feature:283698-283768:1:exon
so has part: feature:284562-284637:1:exon
so has part: feature:285681-285743:1:exon
so has part: feature:285892-285961:1:exon
so has part: feature:287726-287808:1:exon

XP_012426293.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:276099-276212:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:276576-276701:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:282413-282546:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:283359-283476:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:283698-283768:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:284562-284637:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:285681-285743:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:285892-285961:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:287726-287808:1:exon

TPM3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: TPM3
product: tropomyosin 3, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 51 ESTs, 6 long SRA reads, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 161 samples with support for all annotated introns
transcript id: XM_002188879.5
SIO_010081: TPM3
subclass of: SO_0000673
so part of: TPM3
location: join(279018..279232,282413..282546,283359..283476,283698..283768,285133..285208,285681..285743,285892..285961,294012..295168)
location: region:279018-295168:1
so has part: feature:279018-279232:1:exon
so has part: feature:282413-282546:1:exon
so has part: feature:283359-283476:1:exon
so has part: feature:283698-283768:1:exon
so has part: feature:285133-285208:1:exon
so has part: feature:285681-285743:1:exon
so has part: feature:285892-285961:1:exon
so has part: feature:294012-295168:1:exon

position:279018:1
position: 279018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:279018-279232:1:exon

position:279232:1
position: 279232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:282413-282546:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:283359-283476:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:283698-283768:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:285133-285208:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:285681-285743:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:285892-285961:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:294012-295168:1:exon

TPM3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: TPM3
product: tropomyosin 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_030291712.3
SIO_010081: TPM3
subclass of: SO_0000673
so part of: TPM3
location: join(279019..279232,282413..282546,283359..283476,283698..283768,284562..284637,285681..285743,285892..285961,287726..287804,289594..289657,293383..294053)
location: region:279019-294053:1
so has part: feature:279019-279232:1:exon
so has part: feature:282413-282546:1:exon
so has part: feature:283359-283476:1:exon
so has part: feature:283698-283768:1:exon
so has part: feature:284562-284637:1:exon
so has part: feature:285681-285743:1:exon
so has part: feature:285892-285961:1:exon
so has part: feature:287726-287804:1:exon
so has part: feature:289594-289657:1:exon
so has part: feature:293383-294053:1:exon

position:279019:1
position: 279019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:279019-279232:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:282413-282546:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:283359-283476:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:283698-283768:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:284562-284637:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:285681-285743:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:285892-285961:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:287726-287804:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:289594-289657:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:293383-294053:1:exon

TPM3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: TPM3
product: tropomyosin 3, transcript variant X15
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 46 samples with support for all annotated introns
transcript id: XM_030291720.3
SIO_010081: TPM3
subclass of: SO_0000673
so part of: TPM3
location: join(279020..279232,282413..282546,283359..283476,283698..283768,284562..284637,285681..285743,285892..285961,287726..287804,294012..295168)
location: region:279020-295168:1
so has part: feature:279020-279232:1:exon
so has part: feature:282413-282546:1:exon
so has part: feature:283359-283476:1:exon
so has part: feature:283698-283768:1:exon
so has part: feature:284562-284637:1:exon
so has part: feature:285681-285743:1:exon
so has part: feature:285892-285961:1:exon
so has part: feature:287726-287804:1:exon
so has part: feature:294012-295168:1:exon

position:279020:1
position: 279020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:279020-279232:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:282413-282546:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:283359-283476:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:283698-283768:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:284562-284637:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:285681-285743:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:285892-285961:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:287726-287804:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:294012-295168:1:exon

TPM3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: TPM3
product: tropomyosin 3, transcript variant X19
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_030291722.3
SIO_010081: TPM3
subclass of: SO_0000673
so part of: TPM3
location: join(279020..279232,282413..282546,283359..283476,283698..283768,284562..284637,285681..285743,285892..285961,292539..293073)
location: region:279020-293073:1
so has part: feature:279020-279232:1:exon
so has part: feature:282413-282546:1:exon
so has part: feature:283359-283476:1:exon
so has part: feature:283698-283768:1:exon
so has part: feature:284562-284637:1:exon
so has part: feature:285681-285743:1:exon
so has part: feature:285892-285961:1:exon
so has part: feature:292539-293073:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:279020-279232:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:282413-282546:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:283359-283476:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:283698-283768:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:284562-284637:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:285681-285743:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:285892-285961:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:292539-293073:1:exon

TPM3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: TPM3
product: tropomyosin 3, transcript variant X17
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 46 samples with support for all annotated introns
transcript id: XM_030291721.3
SIO_010081: TPM3
subclass of: SO_0000673
so part of: TPM3
location: join(279020..279232,282413..282546,283359..283476,283698..283768,284562..284637,285681..285743,285892..285961,287726..287808)
location: region:279020-287808:1
so has part: feature:279020-279232:1:exon
so has part: feature:282413-282546:1:exon
so has part: feature:283359-283476:1:exon
so has part: feature:283698-283768:1:exon
so has part: feature:284562-284637:1:exon
so has part: feature:285681-285743:1:exon
so has part: feature:285892-285961:1:exon
so has part: feature:287726-287808:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:279020-279232:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:282413-282546:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:283359-283476:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:283698-283768:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:284562-284637:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:285681-285743:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:285892-285961:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:287726-287808:1:exon

TPM3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: TPM3
product: tropomyosin 3, transcript variant X14
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 ESTs, 1 long SRA read, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 46 samples with support for all annotated introns
transcript id: XM_030291719.3
SIO_010081: TPM3
subclass of: SO_0000673
so part of: TPM3
location: join(279021..279232,282413..282546,283359..283476,283698..283768,284562..284637,285681..285743,285892..285961,294012..295168)
location: region:279021-295168:1
so has part: feature:279021-279232:1:exon
so has part: feature:282413-282546:1:exon
so has part: feature:283359-283476:1:exon
so has part: feature:283698-283768:1:exon
so has part: feature:284562-284637:1:exon
so has part: feature:285681-285743:1:exon
so has part: feature:285892-285961:1:exon
so has part: feature:294012-295168:1:exon

position:279021:1
position: 279021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:279021-279232:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:282413-282546:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:283359-283476:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:283698-283768:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:284562-284637:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:285681-285743:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:285892-285961:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:294012-295168:1:exon

TPM3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: TPM3
product: tropomyosin 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 ESTs, 2 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_030291711.3
SIO_010081: TPM3
subclass of: SO_0000673
so part of: TPM3
location: join(279021..279232,282413..282546,283359..283476,283698..283768,285133..285208,285681..285743,285892..285961,287726..287804,289594..289657,293383..294053)
location: region:279021-294053:1
so has part: feature:279021-279232:1:exon
so has part: feature:282413-282546:1:exon
so has part: feature:283359-283476:1:exon
so has part: feature:283698-283768:1:exon
so has part: feature:285133-285208:1:exon
so has part: feature:285681-285743:1:exon
so has part: feature:285892-285961:1:exon
so has part: feature:287726-287804:1:exon
so has part: feature:289594-289657:1:exon
so has part: feature:293383-294053:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:279021-279232:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:282413-282546:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:283359-283476:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:283698-283768:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:285133-285208:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:285681-285743:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:285892-285961:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:287726-287804:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:289594-289657:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:293383-294053:1:exon

TPM3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: TPM3
product: tropomyosin 3, transcript variant X12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 36 ESTs, 4 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 147 samples with support for all annotated introns
transcript id: XM_012570840.4
SIO_010081: TPM3
subclass of: SO_0000673
so part of: TPM3
location: join(279022..279232,282413..282546,283359..283476,283698..283768,285133..285208,285681..285743,285892..285961,287726..287804,294012..295168)
location: region:279022-295168:1
so has part: feature:279022-279232:1:exon
so has part: feature:282413-282546:1:exon
so has part: feature:283359-283476:1:exon
so has part: feature:283698-283768:1:exon
so has part: feature:285133-285208:1:exon
so has part: feature:285681-285743:1:exon
so has part: feature:285892-285961:1:exon
so has part: feature:287726-287804:1:exon
so has part: feature:294012-295168:1:exon

position:279022:1
position: 279022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:279022-279232:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:282413-282546:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:283359-283476:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:283698-283768:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:285133-285208:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:285681-285743:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:285892-285961:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:287726-287804:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:294012-295168:1:exon

TPM3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: TPM3
product: tropomyosin 3, transcript variant X18
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 21 ESTs, 1 long SRA read, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 134 samples with support for all annotated introns
transcript id: XM_012570842.4
SIO_010081: TPM3
subclass of: SO_0000673
so part of: TPM3
location: join(279022..279232,282413..282546,283359..283476,283698..283768,285133..285208,285681..285743,285892..285961,292539..293073)
location: region:279022-293073:1
so has part: feature:279022-279232:1:exon
so has part: feature:282413-282546:1:exon
so has part: feature:283359-283476:1:exon
so has part: feature:283698-283768:1:exon
so has part: feature:285133-285208:1:exon
so has part: feature:285681-285743:1:exon
so has part: feature:285892-285961:1:exon
so has part: feature:292539-293073:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:279022-279232:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:282413-282546:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:283359-283476:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:283698-283768:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:285133-285208:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:285681-285743:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:285892-285961:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:292539-293073:1:exon

TPM3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: TPM3
product: tropomyosin 3, transcript variant X13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 23 ESTs, 1 long SRA read, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_012570841.4
SIO_010081: TPM3
subclass of: SO_0000673
so part of: TPM3
location: join(279022..279232,282413..282546,283359..283476,283698..283768,285133..285208,285681..285743,285892..285961,287726..287804,288456..288804)
location: region:279022-288804:1
so has part: feature:279022-279232:1:exon
so has part: feature:282413-282546:1:exon
so has part: feature:283359-283476:1:exon
so has part: feature:283698-283768:1:exon
so has part: feature:285133-285208:1:exon
so has part: feature:285681-285743:1:exon
so has part: feature:285892-285961:1:exon
so has part: feature:287726-287804:1:exon
so has part: feature:288456-288804:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:279022-279232:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:282413-282546:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:283359-283476:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:283698-283768:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:285133-285208:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:285681-285743:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:285892-285961:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:287726-287804:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:288456-288804:1:exon

TPM3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: TPM3
product: tropomyosin 3, transcript variant X16
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 ESTs, 1 long SRA read, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 154 samples with support for all annotated introns
transcript id: XM_030291718.3
SIO_010081: TPM3
subclass of: SO_0000673
so part of: TPM3
location: join(279022..279232,282413..282546,283359..283476,283698..283768,285133..285208,285681..285743,285892..285961,287726..287808)
location: region:279022-287808:1
so has part: feature:279022-279232:1:exon
so has part: feature:282413-282546:1:exon
so has part: feature:283359-283476:1:exon
so has part: feature:283698-283768:1:exon
so has part: feature:285133-285208:1:exon
so has part: feature:285681-285743:1:exon
so has part: feature:285892-285961:1:exon
so has part: feature:287726-287808:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:279022-279232:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:282413-282546:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:283359-283476:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:283698-283768:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:285133-285208:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:285681-285743:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:285892-285961:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:287726-287808:1:exon

TPM3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: TPM3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-3 chain isoform X14
translation: MAGATTIEAVKRKIQVLQQQADDAEERAERLQREVEAERRNREQAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERTEERAELAESHCRELREQIRVMDQNLKCLSVAEEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEDKLKSTKEEHLCTQRMLDQTLLDLNEM
SIO_010081: TPM3
subclass of: SO_0000673
so part of: TPM3
location: join(279101..279232,282413..282546,283359..283476,283698..283768,284562..284637,285681..285743,285892..285961,294012..294094)
location: region:279101-294094:1
so has part: feature:279101-279232:1:exon
so has part: feature:282413-282546:1:exon
so has part: feature:283359-283476:1:exon
so has part: feature:283698-283768:1:exon
so has part: feature:284562-284637:1:exon
so has part: feature:285681-285743:1:exon
so has part: feature:285892-285961:1:exon
so has part: feature:294012-294094:1:exon

XP_030147579.1
type: Protein
SIO_000068: ncbiprotein

position:279101:1
position: 279101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:279101-279232:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:282413-282546:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:283359-283476:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:283698-283768:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:284562-284637:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:285681-285743:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:285892-285961:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:294012-294094:1:exon

TPM3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: TPM3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-3 chain isoform X11
translation: MAGATTIEAVKRKIQVLQQQADDAEERAERLQREVEAERRNREQAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERTEERAELAESKCSELEEELKNVTNNLKSLEAQAEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEDKLKSTKEEHLCTQRMLDQTLLDLNEM
SIO_010081: TPM3
subclass of: SO_0000673
so part of: TPM3
location: join(279101..279232,282413..282546,283359..283476,283698..283768,285133..285208,285681..285743,285892..285961,294012..294094)
location: region:279101-294094:1
so has part: feature:279101-279232:1:exon
so has part: feature:282413-282546:1:exon
so has part: feature:283359-283476:1:exon
so has part: feature:283698-283768:1:exon
so has part: feature:285133-285208:1:exon
so has part: feature:285681-285743:1:exon
so has part: feature:285892-285961:1:exon
so has part: feature:294012-294094:1:exon

XP_002188915.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:279101-279232:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:282413-282546:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:283359-283476:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:283698-283768:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:285133-285208:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:285681-285743:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:285892-285961:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:294012-294094:1:exon

TPM3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: TPM3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-3 chain isoform X15
translation: MAGATTIEAVKRKIQVLQQQADDAEERAERLQREVEAERRNREQAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERTEERAELAESHCRELREQIRVMDQNLKCLSVAEEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDMTSI
SIO_010081: TPM3
subclass of: SO_0000673
so part of: TPM3
location: join(279101..279232,282413..282546,283359..283476,283698..283768,284562..284637,285681..285743,285892..285961,287726..287804,294012..294015)
location: region:279101-294015:1
so has part: feature:279101-279232:1:exon
so has part: feature:282413-282546:1:exon
so has part: feature:283359-283476:1:exon
so has part: feature:283698-283768:1:exon
so has part: feature:284562-284637:1:exon
so has part: feature:285681-285743:1:exon
so has part: feature:285892-285961:1:exon
so has part: feature:287726-287804:1:exon
so has part: feature:294012-294015:1:exon

XP_030147580.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:279101-279232:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:282413-282546:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:283359-283476:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:283698-283768:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:284562-284637:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:285681-285743:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:285892-285961:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:287726-287804:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:294012-294015:1:exon

TPM3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: TPM3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-3 chain isoform X12
translation: MAGATTIEAVKRKIQVLQQQADDAEERAERLQREVEAERRNREQAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERTEERAELAESKCSELEEELKNVTNNLKSLEAQAEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDMTSI
SIO_010081: TPM3
subclass of: SO_0000673
so part of: TPM3
location: join(279101..279232,282413..282546,283359..283476,283698..283768,285133..285208,285681..285743,285892..285961,287726..287804,294012..294015)
location: region:279101-294015:1
so has part: feature:279101-279232:1:exon
so has part: feature:282413-282546:1:exon
so has part: feature:283359-283476:1:exon
so has part: feature:283698-283768:1:exon
so has part: feature:285133-285208:1:exon
so has part: feature:285681-285743:1:exon
so has part: feature:285892-285961:1:exon
so has part: feature:287726-287804:1:exon
so has part: feature:294012-294015:1:exon

XP_012426294.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:279101-279232:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:282413-282546:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:283359-283476:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:283698-283768:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:285133-285208:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:285681-285743:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:285892-285961:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:287726-287804:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:294012-294015:1:exon

TPM3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: TPM3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-3 chain isoform X3
translation: MAGATTIEAVKRKIQVLQQQADDAEERAERLQREVEAERRNREQAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERTEERAELAESHCRELREQIRVMDQNLKCLSVAEEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDMTSIARRALREQSSDDMGHFPWLSQPVCPVSQRVDVSSDMGGLTFGVKPT
SIO_010081: TPM3
subclass of: SO_0000673
so part of: TPM3
location: join(279101..279232,282413..282546,283359..283476,283698..283768,284562..284637,285681..285743,285892..285961,287726..287804,289594..289657,293383..293460)
location: region:279101-293460:1
so has part: feature:279101-279232:1:exon
so has part: feature:282413-282546:1:exon
so has part: feature:283359-283476:1:exon
so has part: feature:283698-283768:1:exon
so has part: feature:284562-284637:1:exon
so has part: feature:285681-285743:1:exon
so has part: feature:285892-285961:1:exon
so has part: feature:287726-287804:1:exon
so has part: feature:289594-289657:1:exon
so has part: feature:293383-293460:1:exon

XP_030147572.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:279101-279232:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:282413-282546:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:283359-283476:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:283698-283768:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:284562-284637:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:285681-285743:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:285892-285961:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:287726-287804:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:289594-289657:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:293383-293460:1:exon

TPM3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: TPM3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-3 chain isoform X2
translation: MAGATTIEAVKRKIQVLQQQADDAEERAERLQREVEAERRNREQAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERTEERAELAESKCSELEEELKNVTNNLKSLEAQAEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDMTSIARRALREQSSDDMGHFPWLSQPVCPVSQRVDVSSDMGGLTFGVKPT
SIO_010081: TPM3
subclass of: SO_0000673
so part of: TPM3
location: join(279101..279232,282413..282546,283359..283476,283698..283768,285133..285208,285681..285743,285892..285961,287726..287804,289594..289657,293383..293460)
location: region:279101-293460:1
so has part: feature:279101-279232:1:exon
so has part: feature:282413-282546:1:exon
so has part: feature:283359-283476:1:exon
so has part: feature:283698-283768:1:exon
so has part: feature:285133-285208:1:exon
so has part: feature:285681-285743:1:exon
so has part: feature:285892-285961:1:exon
so has part: feature:287726-287804:1:exon
so has part: feature:289594-289657:1:exon
so has part: feature:293383-293460:1:exon

XP_030147571.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:279101-279232:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:282413-282546:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:283359-283476:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:283698-283768:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:285133-285208:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:285681-285743:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:285892-285961:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:287726-287804:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:289594-289657:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:293383-293460:1:exon

TPM3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: TPM3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-3 chain isoform X19
translation: MAGATTIEAVKRKIQVLQQQADDAEERAERLQREVEAERRNREQAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERTEERAELAESHCRELREQIRVMDQNLKCLSVAEEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEERLYSQLEKNRLLSNELKLMLHDLCD
SIO_010081: TPM3
subclass of: SO_0000673
so part of: TPM3
location: join(279101..279232,282413..282546,283359..283476,283698..283768,284562..284637,285681..285743,285892..285961,292539..292618)
location: region:279101-292618:1
so has part: feature:279101-279232:1:exon
so has part: feature:282413-282546:1:exon
so has part: feature:283359-283476:1:exon
so has part: feature:283698-283768:1:exon
so has part: feature:284562-284637:1:exon
so has part: feature:285681-285743:1:exon
so has part: feature:285892-285961:1:exon
so has part: feature:292539-292618:1:exon

XP_030147582.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:279101-279232:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:282413-282546:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:283359-283476:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:283698-283768:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:284562-284637:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:285681-285743:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:285892-285961:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:292539-292618:1:exon

TPM3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: TPM3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-3 chain isoform X18
translation: MAGATTIEAVKRKIQVLQQQADDAEERAERLQREVEAERRNREQAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERTEERAELAESKCSELEEELKNVTNNLKSLEAQAEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEERLYSQLEKNRLLSNELKLMLHDLCD
SIO_010081: TPM3
subclass of: SO_0000673
so part of: TPM3
location: join(279101..279232,282413..282546,283359..283476,283698..283768,285133..285208,285681..285743,285892..285961,292539..292618)
location: region:279101-292618:1
so has part: feature:279101-279232:1:exon
so has part: feature:282413-282546:1:exon
so has part: feature:283359-283476:1:exon
so has part: feature:283698-283768:1:exon
so has part: feature:285133-285208:1:exon
so has part: feature:285681-285743:1:exon
so has part: feature:285892-285961:1:exon
so has part: feature:292539-292618:1:exon

XP_012426296.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:279101-279232:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:282413-282546:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:283359-283476:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:283698-283768:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:285133-285208:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:285681-285743:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:285892-285961:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:292539-292618:1:exon

TPM3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: TPM3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-3 chain isoform X13
translation: MAGATTIEAVKRKIQVLQQQADDAEERAERLQREVEAERRNREQAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERTEERAELAESKCSELEEELKNVTNNLKSLEAQAEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDMTSI
SIO_010081: TPM3
subclass of: SO_0000673
so part of: TPM3
location: join(279101..279232,282413..282546,283359..283476,283698..283768,285133..285208,285681..285743,285892..285961,287726..287804,288456..288459)
location: region:279101-288459:1
so has part: feature:279101-279232:1:exon
so has part: feature:282413-282546:1:exon
so has part: feature:283359-283476:1:exon
so has part: feature:283698-283768:1:exon
so has part: feature:285133-285208:1:exon
so has part: feature:285681-285743:1:exon
so has part: feature:285892-285961:1:exon
so has part: feature:287726-287804:1:exon
so has part: feature:288456-288459:1:exon

XP_012426295.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:279101-279232:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:282413-282546:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:283359-283476:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:283698-283768:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:285133-285208:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:285681-285743:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:285892-285961:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:287726-287804:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:288456-288459:1:exon

TPM3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: TPM3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-3 chain isoform X17
translation: MAGATTIEAVKRKIQVLQQQADDAEERAERLQREVEAERRNREQAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERTEERAELAESHCRELREQIRVMDQNLKCLSVAEEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDMTSM
SIO_010081: TPM3
subclass of: SO_0000673
so part of: TPM3
location: join(279101..279232,282413..282546,283359..283476,283698..283768,284562..284637,285681..285743,285892..285961,287726..287808)
location: region:279101-287808:1
so has part: feature:279101-279232:1:exon
so has part: feature:282413-282546:1:exon
so has part: feature:283359-283476:1:exon
so has part: feature:283698-283768:1:exon
so has part: feature:284562-284637:1:exon
so has part: feature:285681-285743:1:exon
so has part: feature:285892-285961:1:exon
so has part: feature:287726-287808:1:exon

XP_030147581.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:279101-279232:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:282413-282546:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:283359-283476:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:283698-283768:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:284562-284637:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:285681-285743:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:285892-285961:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:287726-287808:1:exon

TPM3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: TPM3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tropomyosin alpha-3 chain isoform X16
translation: MAGATTIEAVKRKIQVLQQQADDAEERAERLQREVEAERRNREQAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERTEERAELAESKCSELEEELKNVTNNLKSLEAQAEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDMTSM
SIO_010081: TPM3
subclass of: SO_0000673
so part of: TPM3
location: join(279101..279232,282413..282546,283359..283476,283698..283768,285133..285208,285681..285743,285892..285961,287726..287808)
location: region:279101-287808:1
so has part: feature:279101-279232:1:exon
so has part: feature:282413-282546:1:exon
so has part: feature:283359-283476:1:exon
so has part: feature:283698-283768:1:exon
so has part: feature:285133-285208:1:exon
so has part: feature:285681-285743:1:exon
so has part: feature:285892-285961:1:exon
so has part: feature:287726-287808:1:exon

XP_030147578.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:279101-279232:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:282413-282546:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:283359-283476:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:283698-283768:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:285133-285208:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:285681-285743:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:285892-285961:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:287726-287808:1:exon

TMEM79
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: TMEM79
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(309758..312712)
location: region:309758-312712:-1
so has part: feature:309758-312712:-1:exon
subclass of: SO_0000010

100226924
type: Gene
SIO_000068: ncbigene

position:309758:-1
position: 309758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:312712:-1
position: 312712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:309758-312712:-1:exon

TMEM79
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: TMEM79
product: transmembrane protein 79
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 1 long SRA read, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_030291638.3
SIO_010081: TMEM79
subclass of: SO_0000673
so part of: TMEM79
location: complement(join(309758..310267,310493..310706,310916..311749,312574..312712))
location: region:309758-312712:-1
so has part: feature:312574-312712:-1:exon
so has part: feature:310916-311749:-1:exon
so has part: feature:310493-310706:-1:exon
so has part: feature:309758-310267:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:312574-312712:-1:exon

position:312574:-1
position: 312574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:310916-311749:-1:exon

position:310916:-1
position: 310916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:311749:-1
position: 311749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:310493-310706:-1:exon

position:310493:-1
position: 310493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:310706:-1
position: 310706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:309758-310267:-1:exon

position:310267:-1
position: 310267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TMEM79
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: TMEM79
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 79
translation: MAAADPVQPPEEVALLDLGKVALAKVPPAPGEHQGDPDATLPWDQSQHSAWGQPELVETKRRSSPEGGHEDLEEAVPTCPTVEAEDEDVPRLPVTAAHVFVPIDPQCIEQSPIKQKQHPSPWPREESRGDAPPSVPPSDRPSSLHHKQVFLPLSPSRCRNTLGFEGHMAKPLAEGSRCPCARDCGTDNLKAVASVAGALLLCPCLIYGAYIFLPFDAPLLPTVSTRLVYTLRCATFATFPIVLGVIVSGISRLCSSALEPFGELQREVEIHRTYVSQSVHLFILYFFNMAVLATYLPQELLKLIPLLTGLFAISRLIFWMSYAIGRSFRAFGFSMTFLPLLAMLLWNLYGMFILEPENLLSVAAPTPEGHSKESRAKLRHWG
SIO_010081: TMEM79
subclass of: SO_0000673
so part of: TMEM79
location: complement(join(310063..310267,310493..310706,310916..311645))
location: region:310063-311645:-1
so has part: feature:310916-311645:-1:exon
so has part: feature:310493-310706:-1:exon
so has part: feature:310063-310267:-1:exon

XP_030147498.3
type: Protein
SIO_000068: ncbiprotein

position:310063:-1
position: 310063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:311645:-1
position: 311645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:310916-311645:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:310493-310706:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:310063-310267:-1:exon

SMG5
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: SMG5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 313525..343330
location: region:313525-343330:1
so has part: feature:313525-343330:1:exon
subclass of: SO_0000010

100231729
type: Gene
SIO_000068: ncbigene

position:313525:1
position: 313525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:343330:1
position: 343330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:313525-343330:1:exon

SMG5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: SMG5
product: SMG5 nonsense mediated mRNA decay factor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 16 long SRA reads, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 92 samples with support for all annotated introns
transcript id: XM_012570847.4
SIO_010081: SMG5
subclass of: SO_0000673
so part of: SMG5
location: join(313525..313672,318904..319002,319609..319732,320340..320496,323361..323450,324788..324877,325811..325889,326446..326571,327020..327088,328970..329178,329300..329437,330458..331159,334038..334207,334469..334544,335340..335515,335874..336032,336242..336301,337096..337255,337639..337729,338309..338383,338676..338814,339195..343330)
location: region:313525-343330:1
so has part: feature:313525-313672:1:exon
so has part: feature:318904-319002:1:exon
so has part: feature:319609-319732:1:exon
so has part: feature:320340-320496:1:exon
so has part: feature:323361-323450:1:exon
so has part: feature:324788-324877:1:exon
so has part: feature:325811-325889:1:exon
so has part: feature:326446-326571:1:exon
so has part: feature:327020-327088:1:exon
so has part: feature:328970-329178:1:exon
so has part: feature:329300-329437:1:exon
so has part: feature:330458-331159:1:exon
so has part: feature:334038-334207:1:exon
so has part: feature:334469-334544:1:exon
so has part: feature:335340-335515:1:exon
so has part: feature:335874-336032:1:exon
so has part: feature:336242-336301:1:exon
so has part: feature:337096-337255:1:exon
so has part: feature:337639-337729:1:exon
so has part: feature:338309-338383:1:exon
so has part: feature:338676-338814:1:exon
so has part: feature:339195-343330:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:313525-313672:1:exon

position:313672:1
position: 313672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:318904-319002:1:exon

position:318904:1
position: 318904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:319002:1
position: 319002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:319609-319732:1:exon

position:319609:1
position: 319609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:319732:1
position: 319732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:320340-320496:1:exon

position:320340:1
position: 320340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:320496:1
position: 320496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:323361-323450:1:exon

position:323361:1
position: 323361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:323450:1
position: 323450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:324788-324877:1:exon

position:324788:1
position: 324788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:324877:1
position: 324877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:325811-325889:1:exon

position:325811:1
position: 325811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:325889:1
position: 325889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:326446-326571:1:exon

position:326446:1
position: 326446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:326571:1
position: 326571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:327020-327088:1:exon

position:327020:1
position: 327020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:327088:1
position: 327088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:328970-329178:1:exon

position:328970:1
position: 328970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:329178:1
position: 329178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:329300-329437:1:exon

position:329300:1
position: 329300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:329437:1
position: 329437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:330458-331159:1:exon

position:330458:1
position: 330458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:331159:1
position: 331159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:334038-334207:1:exon

position:334038:1
position: 334038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:334207:1
position: 334207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:334469-334544:1:exon

position:334469:1
position: 334469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:334544:1
position: 334544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:335340-335515:1:exon

position:335340:1
position: 335340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:335515:1
position: 335515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:335874-336032:1:exon

position:335874:1
position: 335874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:336032:1
position: 336032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:336242-336301:1:exon

position:336242:1
position: 336242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:336301:1
position: 336301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:337096-337255:1:exon

position:337096:1
position: 337096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:337255:1
position: 337255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:337639-337729:1:exon

position:337639:1
position: 337639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:337729:1
position: 337729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:338309-338383:1:exon

position:338309:1
position: 338309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:338383:1
position: 338383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:338676-338814:1:exon

position:338676:1
position: 338676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:338814:1
position: 338814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:339195-343330:1:exon

position:339195:1
position: 339195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SMG5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: SMG5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein SMG5
translation: MSQGGGAAGESGEPEAKVLHTKRLYRAVVEAVHRLDLILGNKAAYQDVFKPENISLRNKLRELCVKLMFLHPVDYGRKAEELLWRKVYYEVIQLIKTNKKHIHSRSTLECAYRTHLVAGIGFYQHLLLYIQSHYQLELQCCIDWTHVTDPLIGCKKPVSASEKEMEWAQMACHRCLVYLGDLARYQNELAGVDTELLAERFYYQALSVAPQVGMPFNQLGTLAGSKYYNVEATYCYLRCIQSEVSFEGAYGNLKRLYDKAAKMYHQLKKCETRKLSPSKKRGKDIKRLLVSFMYLQSLLQPKSSSLDSELTSLCQSVLEDFNLCLFYLPSPPNLSSTSEDEEEYESGYSFLPDLLIFRMVIICLMSVHSLKRAGSKQYSAAIAFTLALFSHLINHVNIRLQAELEEGENPVPAFQSDGTDEQEPREAVNSIEKEAEAELANHQPSEEQRKNDCKKSKKYSRLSCLRRRRHPQKVDESDLSEGFDSDSSQSSIKGSDGSESGSEKSDEEAEAAFDVETDSDMNSQESRSDLEDMEDEPGEEGSSQGKSGPKEALKNCVDSSGLRDSKSPSISKTEAVDPAVNGPASLSTNDASIASNLQAMSTQLFQTKRCFRLAPTFSNILLKPSSDPPALKGGIESKPCVNGDLEKPSLAEQDDVSDSEESISSNKSCRNERSLQEKLEIVTNEGLLLTVKVFLDWLRTNTDLIIMCAQSSQSLWNRLSVLLNLLPSAADLQESGLALCDEVKDILSDAELPDLKANLLLPEDVALRNLPPLKNAHKRFNFEQDRPIFSAVEESVVRICCIRSFGHFITHLQGSILQFNSELGIFISIAQSEQDNLLHQAQAQFHMAAEEARRNRLMRDMAQLRLQLEVSQLEGSLQQPKAQSAMSPYLVPDTQALCQHLALVKQLATSGRFIIIIPRTVIDGLDFLKKENAGARDSIRYLEAEFKKGNRYIRCQKDVGKSFERHKLKRQDLDAWNLYKILDSCKQLTVSQGSGEDDTTGMVTIITGFQLEDPSSFSLPMQSAIQAAANASIEIKNVLEFYKQWKEMG
SIO_010081: SMG5
subclass of: SO_0000673
so part of: SMG5
location: join(313596..313672,318904..319002,319609..319732,320340..320496,323361..323450,324788..324877,325811..325889,326446..326571,327020..327088,328970..329178,329300..329437,330458..331159,334038..334207,334469..334544,335340..335515,335874..336032,336242..336301,337096..337255,337639..337729,338309..338383,338676..338814,339195..339278)
location: region:313596-339278:1
so has part: feature:313596-313672:1:exon
so has part: feature:318904-319002:1:exon
so has part: feature:319609-319732:1:exon
so has part: feature:320340-320496:1:exon
so has part: feature:323361-323450:1:exon
so has part: feature:324788-324877:1:exon
so has part: feature:325811-325889:1:exon
so has part: feature:326446-326571:1:exon
so has part: feature:327020-327088:1:exon
so has part: feature:328970-329178:1:exon
so has part: feature:329300-329437:1:exon
so has part: feature:330458-331159:1:exon
so has part: feature:334038-334207:1:exon
so has part: feature:334469-334544:1:exon
so has part: feature:335340-335515:1:exon
so has part: feature:335874-336032:1:exon
so has part: feature:336242-336301:1:exon
so has part: feature:337096-337255:1:exon
so has part: feature:337639-337729:1:exon
so has part: feature:338309-338383:1:exon
so has part: feature:338676-338814:1:exon
so has part: feature:339195-339278:1:exon

XP_012426301.4
type: Protein
SIO_000068: ncbiprotein

position:313596:1
position: 313596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:339278:1
position: 339278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:313596-313672:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:318904-319002:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:319609-319732:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:320340-320496:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:323361-323450:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:324788-324877:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:325811-325889:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:326446-326571:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:327020-327088:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:328970-329178:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:329300-329437:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:330458-331159:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:334038-334207:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:334469-334544:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:335340-335515:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:335874-336032:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:336242-336301:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:337096-337255:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:337639-337729:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:338309-338383:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:338676-338814:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:339195-339278:1:exon

LOC100229725
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC100229725
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(346509..348993)
location: region:346509-348993:-1
so has part: feature:346509-348993:-1:exon
subclass of: SO_0000010

100229725
type: Gene
SIO_000068: ncbigene

position:346509:-1
position: 346509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:348993:-1
position: 348993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:346509-348993:-1:exon

LOC100229725
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC100229725
product: bone gamma-carboxyglutamate protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_041721153.1
SIO_010081: LOC100229725
subclass of: SO_0000673
so part of: LOC100229725
location: complement(join(346509..346741,346858..346924,347991..348035,348274..348993))
location: region:346509-348993:-1
so has part: feature:348274-348993:-1:exon
so has part: feature:347991-348035:-1:exon
so has part: feature:346858-346924:-1:exon
so has part: feature:346509-346741:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:348274-348993:-1:exon

position:348274:-1
position: 348274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:347991-348035:-1:exon

position:347991:-1
position: 347991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:348035:-1
position: 348035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:346858-346924:-1:exon

position:346858:-1
position: 346858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:346924:-1
position: 346924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:346509-346741:-1:exon

position:346741:-1
position: 346741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100229725
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC100229725
product: bone gamma-carboxyglutamate protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_041721152.1
SIO_010081: LOC100229725
subclass of: SO_0000673
so part of: LOC100229725
location: complement(join(346509..346744,346858..346924,347991..348035,348274..348687))
location: region:346509-348687:-1
so has part: feature:348274-348687:-1:exon
so has part: feature:347991-348035:-1:exon
so has part: feature:346858-346924:-1:exon
so has part: feature:346509-346744:-1:exon

position:348687:-1
position: 348687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:348274-348687:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:347991-348035:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:346858-346924:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:346509-346744:-1:exon

position:346744:-1
position: 346744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100229725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC100229725
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: osteocalcin isoform X2
translation: MILGSALEPGQGSGDWGAHEEPPVPHHPFQWGLGAARLAGLGPPANPPWPGATFPSLCGLWLGTGGPSSSQTTIATSASSSGRGGCAGNNPGEAVLASAKATGPYKDTQGGRAALSSAQEGTMRSLVLLALLALLTLGLCRRAADGSASTQDSPSSEAFVSRRASAELVQRQKRNSGSGSVSGAPWDPLEAKREVCELNPDCDELADQIGLQEAYRRYYGLV
SIO_010081: LOC100229725
subclass of: SO_0000673
so part of: LOC100229725
location: complement(join(346612..346741,346858..346924,347991..348035,348274..348700))
location: region:346612-348700:-1
so has part: feature:348274-348700:-1:exon
so has part: feature:347991-348035:-1:exon
so has part: feature:346858-346924:-1:exon
so has part: feature:346612-346741:-1:exon

XP_041577087.1
type: Protein
SIO_000068: ncbiprotein

position:346612:-1
position: 346612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:348700:-1
position: 348700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:348274-348700:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:347991-348035:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:346858-346924:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:346612-346741:-1:exon

LOC100229725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC100229725
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: osteocalcin isoform X1
translation: MRSLVLLALLALLTLGLCRRAADGSASTQDSPSSEAFVSRRASAELVQRQKRNSGSGSSVSGAPWDPLEAKREVCELNPDCDELADQIGLQEAYRRYYGLV
SIO_010081: LOC100229725
subclass of: SO_0000673
so part of: LOC100229725
location: complement(join(346612..346744,346858..346924,347991..348035,348274..348334))
location: region:346612-348334:-1
so has part: feature:348274-348334:-1:exon
so has part: feature:347991-348035:-1:exon
so has part: feature:346858-346924:-1:exon
so has part: feature:346612-346744:-1:exon

XP_041577086.1
type: Protein
SIO_000068: ncbiprotein

position:348334:-1
position: 348334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:348274-348334:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:347991-348035:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:346858-346924:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:346612-346744:-1:exon

PMF1
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: PMF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(349054..>353586)
location: region:349054-353586:-1
so has part: feature:349054-353586:-1:exon
subclass of: SO_0000010

100229978
type: Gene
SIO_000068: ncbigene

position:349054:-1
position: 349054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:353586:-1
position: 353586
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:349054-353586:-1:exon

PMF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: PMF1
product: polyamine modulated factor 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 96 samples with support for all annotated introns
transcript id: XM_030291167.3
SIO_010081: PMF1
subclass of: SO_0000673
so part of: PMF1
location: complement(join(349054..350146,351650..351845,352451..352551,353220..353325,353429..>353586))
location: region:349054-353586:-1
so has part: feature:353429-353586:-1:exon
so has part: feature:353220-353325:-1:exon
so has part: feature:352451-352551:-1:exon
so has part: feature:351650-351845:-1:exon
so has part: feature:349054-350146:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:353429-353586:-1:exon

position:353429:-1
position: 353429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:353220-353325:-1:exon

position:353220:-1
position: 353220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:353325:-1
position: 353325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:352451-352551:-1:exon

position:352451:-1
position: 352451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:352551:-1
position: 352551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:351650-351845:-1:exon

position:351650:-1
position: 351650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:351845:-1
position: 351845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:349054-350146:-1:exon

position:350146:-1
position: 350146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PMF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: PMF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polyamine-modulated factor 1
translation: AAGGGGGGTDGGGTEDGGADGGGGPAPAAAPGRAQVFSTVVDTFLQKLVTAASYQRFVSCYRCVYKLQPQLTRSIYDQFISQLQACVKEEIQEVKNEGNLEELFSSLDKIVEEAKDREEPAWRPSGIPEQDVRSDLLPYLLQHRAHLRRALRDREQRSSAAAEAVLAGRDRIAELQQLIQARQQAWQASSKEQRELIMTFQEPQ
SIO_010081: PMF1
subclass of: SO_0000673
so part of: PMF1
location: complement(join(350093..350146,351650..351845,352451..352551,353220..353325,353429..>353586))
location: region:350093-353586:-1
so has part: feature:353429-353586:-1:exon
so has part: feature:353220-353325:-1:exon
so has part: feature:352451-352551:-1:exon
so has part: feature:351650-351845:-1:exon
so has part: feature:350093-350146:-1:exon

XP_030147027.3
type: Protein
SIO_000068: ncbiprotein

position:350093:-1
position: 350093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:353429-353586:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:353220-353325:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:352451-352551:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:351650-351845:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:350093-350146:-1:exon

SLC25A44
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: SLC25A44
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(355094..365434)
location: region:355094-365434:-1
so has part: feature:355094-365434:-1:exon
subclass of: SO_0000010

100217515
type: Gene
SIO_000068: ncbigene

position:355094:-1
position: 355094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:365434:-1
position: 365434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:355094-365434:-1:exon

SLC25A44
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: SLC25A44
product: solute carrier family 25 member 44, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 2 long SRA reads, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 114 samples with support for all annotated introns
transcript id: XM_030291412.3
SIO_010081: SLC25A44
subclass of: SO_0000673
so part of: SLC25A44
location: complement(join(355094..357250,357658..357785,359677..360395,360706..360816,365342..365434))
location: region:355094-365434:-1
so has part: feature:365342-365434:-1:exon
so has part: feature:360706-360816:-1:exon
so has part: feature:359677-360395:-1:exon
so has part: feature:357658-357785:-1:exon
so has part: feature:355094-357250:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:365342-365434:-1:exon

position:365342:-1
position: 365342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:360706-360816:-1:exon

position:360706:-1
position: 360706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:360816:-1
position: 360816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:359677-360395:-1:exon

position:359677:-1
position: 359677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:360395:-1
position: 360395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:357658-357785:-1:exon

position:357658:-1
position: 357658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:357785:-1
position: 357785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:355094-357250:-1:exon

position:357250:-1
position: 357250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC25A44
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: SLC25A44
product: solute carrier family 25 member 44, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 55 samples with support for all annotated introns
transcript id: XM_030291415.3
SIO_010081: SLC25A44
subclass of: SO_0000673
so part of: SLC25A44
location: complement(join(355094..357250,357658..357785,359677..360395,365342..365427))
location: region:355094-365427:-1
so has part: feature:365342-365427:-1:exon
so has part: feature:359677-360395:-1:exon
so has part: feature:357658-357785:-1:exon
so has part: feature:355094-357250:-1:exon

position:365427:-1
position: 365427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:365342-365427:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:359677-360395:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:357658-357785:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:355094-357250:-1:exon

SLC25A44
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: SLC25A44
product: solute carrier family 25 member 44, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 43 samples with support for all annotated introns
transcript id: XM_030291413.3
SIO_010081: SLC25A44
subclass of: SO_0000673
so part of: SLC25A44
location: complement(join(355094..357250,357658..357785,359677..360395,360706..360816,365215..365259))
location: region:355094-365259:-1
so has part: feature:365215-365259:-1:exon
so has part: feature:360706-360816:-1:exon
so has part: feature:359677-360395:-1:exon
so has part: feature:357658-357785:-1:exon
so has part: feature:355094-357250:-1:exon

position:365259:-1
position: 365259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:365215-365259:-1:exon

position:365215:-1
position: 365215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:360706-360816:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:359677-360395:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:357658-357785:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:355094-357250:-1:exon

SLC25A44
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: SLC25A44
product: solute carrier family 25 member 44, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_030291414.3
SIO_010081: SLC25A44
subclass of: SO_0000673
so part of: SLC25A44
location: complement(join(355094..357250,357658..357785,359677..360395,360706..360816,361411..361597))
location: region:355094-361597:-1
so has part: feature:361411-361597:-1:exon
so has part: feature:360706-360816:-1:exon
so has part: feature:359677-360395:-1:exon
so has part: feature:357658-357785:-1:exon
so has part: feature:355094-357250:-1:exon

position:361597:-1
position: 361597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:361411-361597:-1:exon

position:361411:-1
position: 361411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:360706-360816:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:359677-360395:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:357658-357785:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:355094-357250:-1:exon

SLC25A44
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: SLC25A44
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 25 member 44
translation: MEDKRNIPIIEWEHLDKRKFYVFGICMTMMIRVSVYPFTLIRTRLQVQKGKSLYNGTFDAFVKILRTEGAAGLYRGFLVNTFTLISGQCYVTTYELTRKYVSRYNNNNAVKSLVAGGSASLVAQSITVPIDVISQHLMMQRKGESMGRFKVQNQDGKRLLVFGQTKDIIVQIFKADGFRGFYRGYVASLLTYIPNSAVWWPFYHFYAEQLSSLTPKDCPHLLLQAISGPLAAATASTLTNPMDVVRARVQVEGKSSIILTFKQLIAEEGPWGLTKGLSARIISATPSTIVIVVGYETLKKLSLRPELVDSRHW
SIO_010081: SLC25A44
subclass of: SO_0000673
so part of: SLC25A44
location: complement(join(357059..357250,357658..357785,359677..360298))
location: region:357059-360298:-1
so has part: feature:359677-360298:-1:exon
so has part: feature:357658-357785:-1:exon
so has part: feature:357059-357250:-1:exon

XP_030147272.1
type: Protein
SIO_000068: ncbiprotein

position:357059:-1
position: 357059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:360298:-1
position: 360298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:359677-360298:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:357658-357785:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:357059-357250:-1:exon

SLC25A44
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: SLC25A44
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 25 member 44
translation: MEDKRNIPIIEWEHLDKRKFYVFGICMTMMIRVSVYPFTLIRTRLQVQKGKSLYNGTFDAFVKILRTEGAAGLYRGFLVNTFTLISGQCYVTTYELTRKYVSRYNNNNAVKSLVAGGSASLVAQSITVPIDVISQHLMMQRKGESMGRFKVQNQDGKRLLVFGQTKDIIVQIFKADGFRGFYRGYVASLLTYIPNSAVWWPFYHFYAEQLSSLTPKDCPHLLLQAISGPLAAATASTLTNPMDVVRARVQVEGKSSIILTFKQLIAEEGPWGLTKGLSARIISATPSTIVIVVGYETLKKLSLRPELVDSRHW
SIO_010081: SLC25A44
subclass of: SO_0000673
so part of: SLC25A44
location: complement(join(357059..357250,357658..357785,359677..360298))
location: region:357059-360298:-1
so has part: feature:359677-360298:-1:exon
so has part: feature:357658-357785:-1:exon
so has part: feature:357059-357250:-1:exon

XP_030147273.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:359677-360298:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:357658-357785:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:357059-357250:-1:exon

SLC25A44
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: SLC25A44
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 25 member 44
translation: MEDKRNIPIIEWEHLDKRKFYVFGICMTMMIRVSVYPFTLIRTRLQVQKGKSLYNGTFDAFVKILRTEGAAGLYRGFLVNTFTLISGQCYVTTYELTRKYVSRYNNNNAVKSLVAGGSASLVAQSITVPIDVISQHLMMQRKGESMGRFKVQNQDGKRLLVFGQTKDIIVQIFKADGFRGFYRGYVASLLTYIPNSAVWWPFYHFYAEQLSSLTPKDCPHLLLQAISGPLAAATASTLTNPMDVVRARVQVEGKSSIILTFKQLIAEEGPWGLTKGLSARIISATPSTIVIVVGYETLKKLSLRPELVDSRHW
SIO_010081: SLC25A44
subclass of: SO_0000673
so part of: SLC25A44
location: complement(join(357059..357250,357658..357785,359677..360298))
location: region:357059-360298:-1
so has part: feature:359677-360298:-1:exon
so has part: feature:357658-357785:-1:exon
so has part: feature:357059-357250:-1:exon

XP_030147274.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:359677-360298:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:357658-357785:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:357059-357250:-1:exon

SLC25A44
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: SLC25A44
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 25 member 44
translation: MEDKRNIPIIEWEHLDKRKFYVFGICMTMMIRVSVYPFTLIRTRLQVQKGKSLYNGTFDAFVKILRTEGAAGLYRGFLVNTFTLISGQCYVTTYELTRKYVSRYNNNNAVKSLVAGGSASLVAQSITVPIDVISQHLMMQRKGESMGRFKVQNQDGKRLLVFGQTKDIIVQIFKADGFRGFYRGYVASLLTYIPNSAVWWPFYHFYAEQLSSLTPKDCPHLLLQAISGPLAAATASTLTNPMDVVRARVQVEGKSSIILTFKQLIAEEGPWGLTKGLSARIISATPSTIVIVVGYETLKKLSLRPELVDSRHW
SIO_010081: SLC25A44
subclass of: SO_0000673
so part of: SLC25A44
location: complement(join(357059..357250,357658..357785,359677..360298))
location: region:357059-360298:-1
so has part: feature:359677-360298:-1:exon
so has part: feature:357658-357785:-1:exon
so has part: feature:357059-357250:-1:exon

XP_030147275.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:359677-360298:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:357658-357785:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:357059-357250:-1:exon

SEMA4A
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: SEMA4A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(366177..374552)
location: region:366177-374552:-1
so has part: feature:366177-374552:-1:exon
subclass of: SO_0000010

100223026
type: Gene
SIO_000068: ncbigene

position:366177:-1
position: 366177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:374552:-1
position: 374552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:366177-374552:-1:exon

SEMA4A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: SEMA4A
product: semaphorin 4A, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_030291594.3
SIO_010081: SEMA4A
subclass of: SO_0000673
so part of: SEMA4A
location: complement(join(366177..367281,367534..367646,367721..367884,367969..368084,368171..368360,368512..368662,368739..368908,369112..369242,369330..369446,369558..369666,370159..370257,370340..370402,370515..370644,371606..371743,374453..374552))
location: region:366177-374552:-1
so has part: feature:374453-374552:-1:exon
so has part: feature:371606-371743:-1:exon
so has part: feature:370515-370644:-1:exon
so has part: feature:370340-370402:-1:exon
so has part: feature:370159-370257:-1:exon
so has part: feature:369558-369666:-1:exon
so has part: feature:369330-369446:-1:exon
so has part: feature:369112-369242:-1:exon
so has part: feature:368739-368908:-1:exon
so has part: feature:368512-368662:-1:exon
so has part: feature:368171-368360:-1:exon
so has part: feature:367969-368084:-1:exon
so has part: feature:367721-367884:-1:exon
so has part: feature:367534-367646:-1:exon
so has part: feature:366177-367281:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:374453-374552:-1:exon

position:374453:-1
position: 374453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:371606-371743:-1:exon

position:371606:-1
position: 371606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:371743:-1
position: 371743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:370515-370644:-1:exon

position:370515:-1
position: 370515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:370644:-1
position: 370644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:370340-370402:-1:exon

position:370340:-1
position: 370340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:370402:-1
position: 370402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:370159-370257:-1:exon

position:370159:-1
position: 370159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:370257:-1
position: 370257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:369558-369666:-1:exon

position:369558:-1
position: 369558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:369666:-1
position: 369666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:369330-369446:-1:exon

position:369330:-1
position: 369330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:369446:-1
position: 369446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:369112-369242:-1:exon

position:369112:-1
position: 369112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:369242:-1
position: 369242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:368739-368908:-1:exon

position:368739:-1
position: 368739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:368908:-1
position: 368908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:368512-368662:-1:exon

position:368512:-1
position: 368512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:368662:-1
position: 368662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:368171-368360:-1:exon

position:368171:-1
position: 368171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:368360:-1
position: 368360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:367969-368084:-1:exon

position:367969:-1
position: 367969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:368084:-1
position: 368084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:367721-367884:-1:exon

position:367721:-1
position: 367721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:367884:-1
position: 367884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:367534-367646:-1:exon

position:367534:-1
position: 367534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:367646:-1
position: 367646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:366177-367281:-1:exon

position:367281:-1
position: 367281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SEMA4A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: SEMA4A
product: semaphorin 4A, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 1 long SRA read, 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XM_030291595.3
SIO_010081: SEMA4A
subclass of: SO_0000673
so part of: SEMA4A
location: complement(join(366177..367281,367534..367646,367721..367884,367969..368084,368171..368360,368512..368662,368739..368908,369112..369242,369330..369446,369558..369666,370159..370257,370340..370402,370515..370675,371606..371743,374453..374538))
location: region:366177-374538:-1
so has part: feature:374453-374538:-1:exon
so has part: feature:371606-371743:-1:exon
so has part: feature:370515-370675:-1:exon
so has part: feature:370340-370402:-1:exon
so has part: feature:370159-370257:-1:exon
so has part: feature:369558-369666:-1:exon
so has part: feature:369330-369446:-1:exon
so has part: feature:369112-369242:-1:exon
so has part: feature:368739-368908:-1:exon
so has part: feature:368512-368662:-1:exon
so has part: feature:368171-368360:-1:exon
so has part: feature:367969-368084:-1:exon
so has part: feature:367721-367884:-1:exon
so has part: feature:367534-367646:-1:exon
so has part: feature:366177-367281:-1:exon

position:374538:-1
position: 374538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:374453-374538:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:371606-371743:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:370515-370675:-1:exon

position:370675:-1
position: 370675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:370340-370402:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:370159-370257:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:369558-369666:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:369330-369446:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:369112-369242:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:368739-368908:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:368512-368662:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:368171-368360:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:367969-368084:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:367721-367884:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:367534-367646:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:366177-367281:-1:exon

SEMA4A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: SEMA4A
product: semaphorin 4A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_030291592.3
SIO_010081: SEMA4A
subclass of: SO_0000673
so part of: SEMA4A
location: complement(join(366177..367281,367534..367646,367721..367884,367969..368084,368171..368360,368512..368662,368739..368908,369112..369242,369330..369446,369558..369666,370159..370257,370340..370402,370515..370644,371606..371743,373013..374131))
location: region:366177-374131:-1
so has part: feature:373013-374131:-1:exon
so has part: feature:371606-371743:-1:exon
so has part: feature:370515-370644:-1:exon
so has part: feature:370340-370402:-1:exon
so has part: feature:370159-370257:-1:exon
so has part: feature:369558-369666:-1:exon
so has part: feature:369330-369446:-1:exon
so has part: feature:369112-369242:-1:exon
so has part: feature:368739-368908:-1:exon
so has part: feature:368512-368662:-1:exon
so has part: feature:368171-368360:-1:exon
so has part: feature:367969-368084:-1:exon
so has part: feature:367721-367884:-1:exon
so has part: feature:367534-367646:-1:exon
so has part: feature:366177-367281:-1:exon

position:374131:-1
position: 374131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:373013-374131:-1:exon

position:373013:-1
position: 373013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:371606-371743:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:370515-370644:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:370340-370402:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:370159-370257:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:369558-369666:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:369330-369446:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:369112-369242:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:368739-368908:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:368512-368662:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:368171-368360:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:367969-368084:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:367721-367884:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:367534-367646:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:366177-367281:-1:exon

SEMA4A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: SEMA4A
product: semaphorin 4A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 long SRA read, 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_030291593.3
SIO_010081: SEMA4A
subclass of: SO_0000673
so part of: SEMA4A
location: complement(join(366177..367281,367534..367646,367721..367884,367969..368084,368171..368360,368512..368662,368739..368908,369112..369242,369330..369446,369558..369666,370159..370257,370340..370402,370515..370675,371606..371743,373013..373122))
location: region:366177-373122:-1
so has part: feature:373013-373122:-1:exon
so has part: feature:371606-371743:-1:exon
so has part: feature:370515-370675:-1:exon
so has part: feature:370340-370402:-1:exon
so has part: feature:370159-370257:-1:exon
so has part: feature:369558-369666:-1:exon
so has part: feature:369330-369446:-1:exon
so has part: feature:369112-369242:-1:exon
so has part: feature:368739-368908:-1:exon
so has part: feature:368512-368662:-1:exon
so has part: feature:368171-368360:-1:exon
so has part: feature:367969-368084:-1:exon
so has part: feature:367721-367884:-1:exon
so has part: feature:367534-367646:-1:exon
so has part: feature:366177-367281:-1:exon

position:373122:-1
position: 373122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:373013-373122:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:371606-371743:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:370515-370675:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:370340-370402:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:370159-370257:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:369558-369666:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:369330-369446:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:369112-369242:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:368739-368908:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:368512-368662:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:368171-368360:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:367969-368084:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:367721-367884:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:367534-367646:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:366177-367281:-1:exon

SEMA4A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: SEMA4A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: semaphorin-4A isoform X3
translation: MRGRGMLLPPARRRDAGGTLVGRIPAAPRHAHRPSAALRGGGARCPALRRAPAPPRLPQRQDNISHYDIFLLDESEEELYVGARDWLLALAVGTPGSIRAKASIMWGATDEKTSECAFKKKSQETECFNFIRVLVALNQTHLYVCGTYAFSPACTYIHLENFTLVPSGRGQPFLDGKGQCPFDPKHTYTALLVDGELYAGTMNNFQGNEPIISRSLGTRTLLKTDAFLRWLSADAAFVASFSIPEDDKVYFFFEETADEFDFFEKLLVPRVARVCKSDVGGEKLLQKKWTTFLKAQLVCSQTGHFPFNVIHHTFALLRHDGRADFYAVFTSQWQAGRAGSAAVCAYRQEDLEKVFEGKYKELNKESSRWTVYSGPDMSPRPGSCSMGASSDKALSFMKDHFLMDGKVSPMRGQPLLVKSDVTYTRITVHETRGVSGTTYRVMFLATADGLLHKAVELSGGAHIVESIQLFARPEPVKNLLLAPGKGILYVGYSRGVLQVPLANCSLHRSCAECVLARDPYCAWHSPEGSCLPAHLATESRSAWLQDIETGSPGTLCQRGRSAAMPRSWGAPEDPAVQGLSPRLNAVVPLPCPRRSALATYSWQQPSGARGHTVLQPDHTLVVIVQRGTAGTYTCQATENGYTWTVAQYQLRDFGGDGMDRGTPRSYWLEFVTVTVLLAVTLTVAACLALLTYRDQLRARSKVRGCSTPHSPPARPREKVPLNGGTGEPPAPGAATEEEEEDEGSQACCLQLDGDIDVDNNRLHVPAGDRA
SIO_010081: SEMA4A
subclass of: SO_0000673
so part of: SEMA4A
location: complement(join(366701..367281,367534..367646,367721..367884,367969..368084,368171..368360,368512..368662,368739..368908,369112..369242,369330..369446,369558..369666,370159..370257,370340..370402,370515..370644,371606..371743,374453..374493))
location: region:366701-374493:-1
so has part: feature:374453-374493:-1:exon
so has part: feature:371606-371743:-1:exon
so has part: feature:370515-370644:-1:exon
so has part: feature:370340-370402:-1:exon
so has part: feature:370159-370257:-1:exon
so has part: feature:369558-369666:-1:exon
so has part: feature:369330-369446:-1:exon
so has part: feature:369112-369242:-1:exon
so has part: feature:368739-368908:-1:exon
so has part: feature:368512-368662:-1:exon
so has part: feature:368171-368360:-1:exon
so has part: feature:367969-368084:-1:exon
so has part: feature:367721-367884:-1:exon
so has part: feature:367534-367646:-1:exon
so has part: feature:366701-367281:-1:exon

XP_030147454.3
type: Protein
SIO_000068: ncbiprotein

position:366701:-1
position: 366701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:374493:-1
position: 374493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:374453-374493:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:371606-371743:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:370515-370644:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:370340-370402:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:370159-370257:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:369558-369666:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:369330-369446:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:369112-369242:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:368739-368908:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:368512-368662:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:368171-368360:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:367969-368084:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:367721-367884:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:367534-367646:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:366701-367281:-1:exon

SEMA4A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: SEMA4A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: semaphorin-4A isoform X1
translation: MPGPRLRAAPSPRQPFAKWEIRGRVTYFLCSQGASVPAKQGAEHSAALPGLHVPLGCSGDGRGRDAGGTLVGRIPAAPRHAHRPSAALRGGGARCPALRRAPAPPRLPQRQDNISHYDIFLLDESEEELYVGARDWLLALAVGTPGSIRAKASIMWGATDEKTSECAFKKKSQETECFNFIRVLVALNQTHLYVCGTYAFSPACTYIHLENFTLVPSGRGQPFLDGKGQCPFDPKHTYTALLVDGELYAGTMNNFQGNEPIISRSLGTRTLLKTDAFLRWLSADAAFVASFSIPEDDKVYFFFEETADEFDFFEKLLVPRVARVCKSDVGGEKLLQKKWTTFLKAQLVCSQTGHFPFNVIHHTFALLRHDGRADFYAVFTSQWQAGRAGSAAVCAYRQEDLEKVFEGKYKELNKESSRWTVYSGPDMSPRPGSCSMGASSDKALSFMKDHFLMDGKVSPMRGQPLLVKSDVTYTRITVHETRGVSGTTYRVMFLATADGLLHKAVELSGGAHIVESIQLFARPEPVKNLLLAPGKGILYVGYSRGVLQVPLANCSLHRSCAECVLARDPYCAWHSPEGSCLPAHLATESRSAWLQDIETGSPGTLCQRGRSAAMPRSWGAPEDPAVQGLSPRLNAVVPLPCPRRSALATYSWQQPSGARGHTVLQPDHTLVVIVQRGTAGTYTCQATENGYTWTVAQYQLRDFGGDGMDRGTPRSYWLEFVTVTVLLAVTLTVAACLALLTYRDQLRARSKVRGCSTPHSPPARPREKVPLNGGTGEPPAPGAATEEEEEDEGSQACCLQLDGDIDVDNNRLHVPAGDRA
SIO_010081: SEMA4A
subclass of: SO_0000673
so part of: SEMA4A
location: complement(join(366701..367281,367534..367646,367721..367884,367969..368084,368171..368360,368512..368662,368739..368908,369112..369242,369330..369446,369558..369666,370159..370257,370340..370402,370515..370644,371606..371743,373013..373203))
location: region:366701-373203:-1
so has part: feature:373013-373203:-1:exon
so has part: feature:371606-371743:-1:exon
so has part: feature:370515-370644:-1:exon
so has part: feature:370340-370402:-1:exon
so has part: feature:370159-370257:-1:exon
so has part: feature:369558-369666:-1:exon
so has part: feature:369330-369446:-1:exon
so has part: feature:369112-369242:-1:exon
so has part: feature:368739-368908:-1:exon
so has part: feature:368512-368662:-1:exon
so has part: feature:368171-368360:-1:exon
so has part: feature:367969-368084:-1:exon
so has part: feature:367721-367884:-1:exon
so has part: feature:367534-367646:-1:exon
so has part: feature:366701-367281:-1:exon

XP_030147452.3
type: Protein
SIO_000068: ncbiprotein

position:373203:-1
position: 373203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:373013-373203:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:371606-371743:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:370515-370644:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:370340-370402:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:370159-370257:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:369558-369666:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:369330-369446:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:369112-369242:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:368739-368908:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:368512-368662:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:368171-368360:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:367969-368084:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:367721-367884:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:367534-367646:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:366701-367281:-1:exon

SEMA4A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: SEMA4A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: semaphorin-4A isoform X2
translation: MSRWAALGMGEAGMLVGPSWGASLPPPAMPTALRLLCGVVVPAALLCAEPLPRLAFPSGDPRRTLTHFSQDNISHYDIFLLDESEEELYVGARDWLLALAVGTPGSIRAKASIMWGATDEKTSECAFKKKSQETECFNFIRVLVALNQTHLYVCGTYAFSPACTYIHLENFTLVPSGRGQPFLDGKGQCPFDPKHTYTALLVDGELYAGTMNNFQGNEPIISRSLGTRTLLKTDAFLRWLSADAAFVASFSIPEDDKVYFFFEETADEFDFFEKLLVPRVARVCKSDVGGEKLLQKKWTTFLKAQLVCSQTGHFPFNVIHHTFALLRHDGRADFYAVFTSQWQAGRAGSAAVCAYRQEDLEKVFEGKYKELNKESSRWTVYSGPDMSPRPGSCSMGASSDKALSFMKDHFLMDGKVSPMRGQPLLVKSDVTYTRITVHETRGVSGTTYRVMFLATADGLLHKAVELSGGAHIVESIQLFARPEPVKNLLLAPGKGILYVGYSRGVLQVPLANCSLHRSCAECVLARDPYCAWHSPEGSCLPAHLATESRSAWLQDIETGSPGTLCQRGRSAAMPRSWGAPEDPAVQGLSPRLNAVVPLPCPRRSALATYSWQQPSGARGHTVLQPDHTLVVIVQRGTAGTYTCQATENGYTWTVAQYQLRDFGGDGMDRGTPRSYWLEFVTVTVLLAVTLTVAACLALLTYRDQLRARSKVRGCSTPHSPPARPREKVPLNGGTGEPPAPGAATEEEEEDEGSQACCLQLDGDIDVDNNRLHVPAGDRA
SIO_010081: SEMA4A
subclass of: SO_0000673
so part of: SEMA4A
location: complement(join(366701..367281,367534..367646,367721..367884,367969..368084,368171..368360,368512..368662,368739..368908,369112..369242,369330..369446,369558..369666,370159..370257,370340..370402,370515..370675,371606..371743,373013..373049))
location: region:366701-373049:-1
so has part: feature:373013-373049:-1:exon
so has part: feature:371606-371743:-1:exon
so has part: feature:370515-370675:-1:exon
so has part: feature:370340-370402:-1:exon
so has part: feature:370159-370257:-1:exon
so has part: feature:369558-369666:-1:exon
so has part: feature:369330-369446:-1:exon
so has part: feature:369112-369242:-1:exon
so has part: feature:368739-368908:-1:exon
so has part: feature:368512-368662:-1:exon
so has part: feature:368171-368360:-1:exon
so has part: feature:367969-368084:-1:exon
so has part: feature:367721-367884:-1:exon
so has part: feature:367534-367646:-1:exon
so has part: feature:366701-367281:-1:exon

XP_030147453.3
type: Protein
SIO_000068: ncbiprotein

position:373049:-1
position: 373049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:373013-373049:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:371606-371743:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:370515-370675:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:370340-370402:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:370159-370257:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:369558-369666:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:369330-369446:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:369112-369242:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:368739-368908:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:368512-368662:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:368171-368360:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:367969-368084:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:367721-367884:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:367534-367646:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:366701-367281:-1:exon

SEMA4A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: SEMA4A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: semaphorin-4A isoform X4
translation: MLVGPSWGASLPPPAMPTALRLLCGVVVPAALLCAEPLPRLAFPSGDPRRTLTHFSQDNISHYDIFLLDESEEELYVGARDWLLALAVGTPGSIRAKASIMWGATDEKTSECAFKKKSQETECFNFIRVLVALNQTHLYVCGTYAFSPACTYIHLENFTLVPSGRGQPFLDGKGQCPFDPKHTYTALLVDGELYAGTMNNFQGNEPIISRSLGTRTLLKTDAFLRWLSADAAFVASFSIPEDDKVYFFFEETADEFDFFEKLLVPRVARVCKSDVGGEKLLQKKWTTFLKAQLVCSQTGHFPFNVIHHTFALLRHDGRADFYAVFTSQWQAGRAGSAAVCAYRQEDLEKVFEGKYKELNKESSRWTVYSGPDMSPRPGSCSMGASSDKALSFMKDHFLMDGKVSPMRGQPLLVKSDVTYTRITVHETRGVSGTTYRVMFLATADGLLHKAVELSGGAHIVESIQLFARPEPVKNLLLAPGKGILYVGYSRGVLQVPLANCSLHRSCAECVLARDPYCAWHSPEGSCLPAHLATESRSAWLQDIETGSPGTLCQRGRSAAMPRSWGAPEDPAVQGLSPRLNAVVPLPCPRRSALATYSWQQPSGARGHTVLQPDHTLVVIVQRGTAGTYTCQATENGYTWTVAQYQLRDFGGDGMDRGTPRSYWLEFVTVTVLLAVTLTVAACLALLTYRDQLRARSKVRGCSTPHSPPARPREKVPLNGGTGEPPAPGAATEEEEEDEGSQACCLQLDGDIDVDNNRLHVPAGDRA
SIO_010081: SEMA4A
subclass of: SO_0000673
so part of: SEMA4A
location: complement(join(366701..367281,367534..367646,367721..367884,367969..368084,368171..368360,368512..368662,368739..368908,369112..369242,369330..369446,369558..369666,370159..370257,370340..370402,370515..370675,371606..371741))
location: region:366701-371741:-1
so has part: feature:371606-371741:-1:exon
so has part: feature:370515-370675:-1:exon
so has part: feature:370340-370402:-1:exon
so has part: feature:370159-370257:-1:exon
so has part: feature:369558-369666:-1:exon
so has part: feature:369330-369446:-1:exon
so has part: feature:369112-369242:-1:exon
so has part: feature:368739-368908:-1:exon
so has part: feature:368512-368662:-1:exon
so has part: feature:368171-368360:-1:exon
so has part: feature:367969-368084:-1:exon
so has part: feature:367721-367884:-1:exon
so has part: feature:367534-367646:-1:exon
so has part: feature:366701-367281:-1:exon

XP_030147455.3
type: Protein
SIO_000068: ncbiprotein

position:371741:-1
position: 371741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:371606-371741:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:370515-370675:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:370340-370402:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:370159-370257:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:369558-369666:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:369330-369446:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:369112-369242:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:368739-368908:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:368512-368662:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:368171-368360:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:367969-368084:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:367721-367884:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:367534-367646:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:366701-367281:-1:exon

LMNA
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LMNA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(377566..399384)
location: region:377566-399384:-1
so has part: feature:377566-399384:-1:exon
subclass of: SO_0000010

100218522
type: Gene
SIO_000068: ncbigene

position:377566:-1
position: 377566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:399384:-1
position: 399384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:377566-399384:-1:exon

LMNA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LMNA
product: lamin A/C
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 long SRA reads, 30 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 97 samples with support for all annotated introns
transcript id: XM_030291430.3
SIO_010081: LMNA
subclass of: SO_0000673
so part of: LMNA
location: complement(join(377566..378922,379540..379791,381548..381643,381722..381841,381998..382105,382237..382441,382533..382753,382844..382969,383070..383240,383330..383455,383634..383790,398909..399384))
location: region:377566-399384:-1
so has part: feature:398909-399384:-1:exon
so has part: feature:383634-383790:-1:exon
so has part: feature:383330-383455:-1:exon
so has part: feature:383070-383240:-1:exon
so has part: feature:382844-382969:-1:exon
so has part: feature:382533-382753:-1:exon
so has part: feature:382237-382441:-1:exon
so has part: feature:381998-382105:-1:exon
so has part: feature:381722-381841:-1:exon
so has part: feature:381548-381643:-1:exon
so has part: feature:379540-379791:-1:exon
so has part: feature:377566-378922:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:398909-399384:-1:exon

position:398909:-1
position: 398909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:383634-383790:-1:exon

position:383634:-1
position: 383634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:383790:-1
position: 383790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:383330-383455:-1:exon

position:383330:-1
position: 383330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:383455:-1
position: 383455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:383070-383240:-1:exon

position:383070:-1
position: 383070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:383240:-1
position: 383240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:382844-382969:-1:exon

position:382844:-1
position: 382844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:382969:-1
position: 382969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:382533-382753:-1:exon

position:382533:-1
position: 382533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:382753:-1
position: 382753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:382237-382441:-1:exon

position:382237:-1
position: 382237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:382441:-1
position: 382441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:381998-382105:-1:exon

position:381998:-1
position: 381998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:382105:-1
position: 382105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:381722-381841:-1:exon

position:381722:-1
position: 381722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:381841:-1
position: 381841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:381548-381643:-1:exon

position:381548:-1
position: 381548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:381643:-1
position: 381643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:379540-379791:-1:exon

position:379540:-1
position: 379540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:379791:-1
position: 379791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:377566-378922:-1:exon

position:378922:-1
position: 378922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LMNA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LMNA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lamin
translation: MATPSQKRSTRSGASGTPLSPTRITRLQEKEDLQELNDRLAVYIDKVRSLELENAGLRLRITESEEVVSREVSGIKAAYESELADARKTLDSVAKERARLQLELSKVREEHKELKARNAKKEGDLLTAQARLKDVEALLNSKEAALSTALGEKRNLENEVRDLRGQVAKLESALGEAKKQLQDEMLRRVDAENRLQTLKEELEFQKNIYSEELRETKRRHETRLVEIDNGRQREFESKLSEALQELRSQHEAQIRLYKEELEKTYGAKLENAKQSAERNSNMVGAAHEELQQTRIRIDNLSSEVSQLQKQLAAKEAKLHDLEDILARERESNRRLLADKEREMAEMRARMQQQLDEYQELLDIKLALDMEINAYRKLLEGEEERLRLSPSPSSHKGASRSHLSTPGSSKKRKLEDSESRTSFSHHARTSGRVGVEEVDLEGKFVRLRNKSNEDQAMGNWQIKRQNGDDPPLTYRFPPKYTLKAGQVVTIWASGAGATHSPPSNLVWKTQSSWGSGDSLRTALINSNGEEVAMRKLVRTVIINDDEDEDDEEMSIHHRHHHGCSGSGDPGEYNLRSRTVVCGTCGQPADKSGTQNAGVSTMSSGSSTSSVTVTRSYRSMGDSGIGLGDSLVTRNYLLGNSSPRRQAQAVQNCSIM
SIO_010081: LMNA
subclass of: SO_0000673
so part of: LMNA
location: complement(join(378890..378922,379540..379791,381548..381643,381722..381841,381998..382105,382237..382441,382533..382753,382844..382969,383070..383240,383330..383455,383634..383790,398909..399258))
location: region:378890-399258:-1
so has part: feature:398909-399258:-1:exon
so has part: feature:383634-383790:-1:exon
so has part: feature:383330-383455:-1:exon
so has part: feature:383070-383240:-1:exon
so has part: feature:382844-382969:-1:exon
so has part: feature:382533-382753:-1:exon
so has part: feature:382237-382441:-1:exon
so has part: feature:381998-382105:-1:exon
so has part: feature:381722-381841:-1:exon
so has part: feature:381548-381643:-1:exon
so has part: feature:379540-379791:-1:exon
so has part: feature:378890-378922:-1:exon

XP_030147290.3
type: Protein
SIO_000068: ncbiprotein

position:378890:-1
position: 378890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:399258:-1
position: 399258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:398909-399258:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:383634-383790:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:383330-383455:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:383070-383240:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:382844-382969:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:382533-382753:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:382237-382441:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:381998-382105:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:381722-381841:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:381548-381643:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:379540-379791:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:378890-378922:-1:exon

LOC115498507
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC115498507
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 407628..415413
location: region:407628-415413:1
so has part: feature:407628-415413:1:exon
subclass of: SO_0000011

115498507
type: Gene
SIO_000068: ncbigene

position:407628:1
position: 407628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:415413:1
position: 415413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:407628-415413:1:exon

LOC115498507
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC115498507
product: uncharacterized LOC115498507
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XR_003963822.3
SIO_010081: LOC115498507
subclass of: SO_0000673
so part of: LOC115498507
location: join(407628..408225,414757..415413)
location: region:407628-415413:1
so has part: feature:407628-408225:1:exon
so has part: feature:414757-415413:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:407628-408225:1:exon

position:408225:1
position: 408225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:414757-415413:1:exon

position:414757:1
position: 414757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115498503
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC115498503
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 416150..421360
location: region:416150-421360:1
so has part: feature:416150-421360:1:exon
subclass of: SO_0000011

115498503
type: Gene
SIO_000068: ncbigene

position:416150:1
position: 416150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:421360:1
position: 421360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:416150-421360:1:exon

LOC115498503
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC115498503
product: uncharacterized LOC115498503
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XR_004369795.2
SIO_010081: LOC115498503
subclass of: SO_0000673
so part of: LOC115498503
location: join(416150..417246,418010..421360)
location: region:416150-421360:1
so has part: feature:416150-417246:1:exon
so has part: feature:418010-421360:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:416150-417246:1:exon

position:417246:1
position: 417246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:418010-421360:1:exon

position:418010:1
position: 418010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MEX3A
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: MEX3A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 423885..439987
location: region:423885-439987:1
so has part: feature:423885-439987:1:exon
subclass of: SO_0000010

100225899
type: Gene
SIO_000068: ncbigene

position:423885:1
position: 423885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:439987:1
position: 439987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:423885-439987:1:exon

MEX3A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: MEX3A
product: mex-3 RNA binding family member A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 11 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 52 samples with support for all annotated introns
transcript id: XM_030291699.3
SIO_010081: MEX3A
subclass of: SO_0000673
so part of: MEX3A
location: join(423885..424408,434923..439987)
location: region:423885-439987:1
so has part: feature:423885-424408:1:exon
so has part: feature:434923-439987:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:423885-424408:1:exon

position:424408:1
position: 424408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:434923-439987:1:exon

position:434923:1
position: 434923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MEX3A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: MEX3A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding protein MEX3A
translation: MPSLVVPGIMERNGGFGDLGCFGGSGKDRALLEDDRALQLALDQLCLLGLGEPSSSSSSSAVVLVEDSNNNNNNPPPPPPQQPPPPPPPPQQPPPPPPPPPPAAPKGSAAPSAGAAEPKLCALYKEAELRLKSSSNTTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVFMVTGRREDVAMARREIISAAEHFSMIRASRNKAGTTFGSAPTLPGQVTIRVRVPYRVVGLVVGPKGATIKRIQQQTNTYIITPSRDRDPVFEITGAPGNVERAREEIETHIAVRTGKILEYNNENDFLSSSPDSGMENRYSEAWRVHTPAPGCKPLSTFRQNSLGCIGDCSVDPVYETPRLNDQNDFNYGYLFPNYGVNKQDLYYGVPESGAPMWAGQENTNPVSVLFSKQQRSSSTGTIHPNSHRSPSSSMPEPGLSGLPRRSQGEPLQGFSKLGTPAAARTAVASSRECMVCFESEVTAALVPCGHNLFCMECAVRICERTDPECPVCHAAATQAIRIFS
SIO_010081: MEX3A
subclass of: SO_0000673
so part of: MEX3A
location: join(423940..424408,434923..436028)
location: region:423940-436028:1
so has part: feature:423940-424408:1:exon
so has part: feature:434923-436028:1:exon

XP_030147559.2
type: Protein
SIO_000068: ncbiprotein

position:423940:1
position: 423940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:436028:1
position: 436028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:423940-424408:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:434923-436028:1:exon

LOC100231666
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC100231666
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(447958..454167)
location: region:447958-454167:-1
so has part: feature:447958-454167:-1:exon
subclass of: SO_0000010

100231666
type: Gene
SIO_000068: ncbigene

position:447958:-1
position: 447958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:454167:-1
position: 454167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:447958-454167:-1:exon

LOC100231666
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC100231666
product: ras-related protein Rab-11A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 116 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030291700.3
SIO_010081: LOC100231666
subclass of: SO_0000673
so part of: LOC100231666
location: complement(join(447958..449389,449691..449771,449853..450046,450492..450687,454074..454167))
location: region:447958-454167:-1
so has part: feature:454074-454167:-1:exon
so has part: feature:450492-450687:-1:exon
so has part: feature:449853-450046:-1:exon
so has part: feature:449691-449771:-1:exon
so has part: feature:447958-449389:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:454074-454167:-1:exon

position:454074:-1
position: 454074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:450492-450687:-1:exon

position:450492:-1
position: 450492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:450687:-1
position: 450687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:449853-450046:-1:exon

position:449853:-1
position: 449853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:450046:-1
position: 450046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:449691-449771:-1:exon

position:449691:-1
position: 449691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:449771:-1
position: 449771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:447958-449389:-1:exon

position:449389:-1
position: 449389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100231666
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC100231666
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rab-11A
translation: MRGKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDNKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKYLTYENAERWLKELQDHADANIVIMLVGNKSDLRHLRAVPTDEARSFAEKNGLSFLETSALDSTNVETAFHNILSEIYRIVSQRQITGQAESEFGPSSTIEPIQVLPTQQEGRQAPCCQNI
SIO_010081: LOC100231666
subclass of: SO_0000673
so part of: LOC100231666
location: complement(join(449250..449389,449691..449771,449853..450046,450492..450687,454074..454113))
location: region:449250-454113:-1
so has part: feature:454074-454113:-1:exon
so has part: feature:450492-450687:-1:exon
so has part: feature:449853-450046:-1:exon
so has part: feature:449691-449771:-1:exon
so has part: feature:449250-449389:-1:exon

XP_030147560.1
type: Protein
SIO_000068: ncbiprotein

position:449250:-1
position: 449250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:454113:-1
position: 454113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:454074-454113:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:450492-450687:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:449853-450046:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:449691-449771:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:449250-449389:-1:exon

RAB25
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: RAB25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(455335..459117)
location: region:455335-459117:-1
so has part: feature:455335-459117:-1:exon
subclass of: SO_0000010

100219175
type: Gene
SIO_000068: ncbigene

position:455335:-1
position: 455335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:459117:-1
position: 459117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:455335-459117:-1:exon

RAB25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: RAB25
product: RAB25, member RAS oncogene family
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 79 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_002187564.4
SIO_010081: RAB25
subclass of: SO_0000673
so part of: RAB25
location: complement(join(455335..456040,456852..456932,457079..457272,457384..457579,458440..459117))
location: region:455335-459117:-1
so has part: feature:458440-459117:-1:exon
so has part: feature:457384-457579:-1:exon
so has part: feature:457079-457272:-1:exon
so has part: feature:456852-456932:-1:exon
so has part: feature:455335-456040:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:458440-459117:-1:exon

position:458440:-1
position: 458440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:457384-457579:-1:exon

position:457384:-1
position: 457384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:457579:-1
position: 457579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:457079-457272:-1:exon

position:457079:-1
position: 457079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:457272:-1
position: 457272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:456852-456932:-1:exon

position:456852:-1
position: 456852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:456932:-1
position: 456932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:455335-456040:-1:exon

position:456040:-1
position: 456040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RAB25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: RAB25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rab-25
translation: MGSAEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFNHDSRTTIGVEFSTRTILVGDAVVKAQIWDTAGLERYRAITSAYYRGAVGALVVFDITKHQTYDVVDRWLKELYDHAEASIVVMLVGNKTDLAQAREVPMEEAKMFADNNGLLFVETSALDSTNVEEAFETILKEIFYKVQKQKQRSSQSNTVSLASESPASTAPVQAERRPCCVPL
SIO_010081: RAB25
subclass of: SO_0000673
so part of: RAB25
location: complement(join(455910..456040,456852..456932,457079..457272,457384..457579,458440..458479))
location: region:455910-458479:-1
so has part: feature:458440-458479:-1:exon
so has part: feature:457384-457579:-1:exon
so has part: feature:457079-457272:-1:exon
so has part: feature:456852-456932:-1:exon
so has part: feature:455910-456040:-1:exon

XP_002187600.1
type: Protein
SIO_000068: ncbiprotein

position:455910:-1
position: 455910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:458479:-1
position: 458479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:458440-458479:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:457384-457579:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:457079-457272:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:456852-456932:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:455910-456040:-1:exon

LAMTOR2
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
alternative label: mapbpip
alternative label: robld3
gene: LAMTOR2
gene synonym: mapbpip; robld3
note: late endosomal/lysosomal adaptor, MAPK and MTOR activator 2; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: complement(459219..461291)
location: region:459219-461291:-1
so has part: feature:459219-461291:-1:exon
subclass of: SO_0000010

100190214
type: Gene
SIO_000068: ncbigene

position:459219:-1
position: 459219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:461291:-1
position: 461291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:459219-461291:-1:exon

LAMTOR2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
alternative label: mapbpip
alternative label: robld3
gene: LAMTOR2
gene synonym: mapbpip; robld3
product: late endosomal/lysosomal adaptor, MAPK and MTOR activator 2
inference: similar to RNA sequence, mRNA (same species):RefSeq:NM_001245129.1
exception: annotated by transcript or proteomic data
note: The RefSeq transcript has 9 substitutions, 2 non-frameshifting indels compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001245129.1
SIO_010081: LAMTOR2
subclass of: SO_0000673
so part of: LAMTOR2
location: complement(join(459219..459450,459725..459814,459930..460092,461199..461291))
location: region:459219-461291:-1
so has part: feature:461199-461291:-1:exon
so has part: feature:459930-460092:-1:exon
so has part: feature:459725-459814:-1:exon
so has part: feature:459219-459450:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:461199-461291:-1:exon

position:461199:-1
position: 461199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:459930-460092:-1:exon

position:459930:-1
position: 459930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:460092:-1
position: 460092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:459725-459814:-1:exon

position:459725:-1
position: 459725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:459814:-1
position: 459814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:459219-459450:-1:exon

position:459450:-1
position: 459450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LAMTOR2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
alternative label: mapbpip
alternative label: robld3
gene: LAMTOR2
gene synonym: mapbpip; robld3
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: ragulator complex protein LAMTOR2
translation: MLRPKALTQVLSQANTGGVQSTLLLNNEGSLLAYSGYGDTDARVTAAIASNIWVAYDKNGHQAFNEDNLKFILMDCMEGRVAITRVANLLLCMYAKETVGFGMLKAKAQALVQYLEEPLTQVAAS
SIO_010081: LAMTOR2
subclass of: SO_0000673
so part of: LAMTOR2
location: complement(join(459394..459450,459725..459814,459930..460092,461199..461266))
location: region:459394-461266:-1
so has part: feature:461199-461266:-1:exon
so has part: feature:459930-460092:-1:exon
so has part: feature:459725-459814:-1:exon
so has part: feature:459394-459450:-1:exon

NP_001232058.1
type: Protein
SIO_000068: ncbiprotein

position:459394:-1
position: 459394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:461266:-1
position: 461266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:461199-461266:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:459930-460092:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:459725-459814:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:459394-459450:-1:exon

LAMTOR2
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 59729
alternative label: mapbpip
alternative label: robld3
gene: LAMTOR2
gene synonym: mapbpip; robld3
note: propagated from UniProtKB/Swiss-Prot (B5FYY5.1); Region: Required for location at endosomes. /evidence=ECO:0000250
SIO_010081: LAMTOR2
subclass of: SO_0000673
so part of: LAMTOR2
location: complement(459951..459992)
location: region:459951-459992:-1
so has part: feature:459951-459992:-1:exon

position:459951:-1
position: 459951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:459992:-1
position: 459992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:459951-459992:-1:exon

UBQLN4
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: UBQLN4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 461650..472879
location: region:461650-472879:1
so has part: feature:461650-472879:1:exon
subclass of: SO_0000010

100224926
type: Gene
SIO_000068: ncbigene

position:461650:1
position: 461650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:472879:1
position: 472879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:461650-472879:1:exon

UBQLN4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: UBQLN4
product: ubiquilin 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 ESTs, 4 long SRA reads, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 152 samples with support for all annotated introns
transcript id: XM_030291701.3
SIO_010081: UBQLN4
subclass of: SO_0000673
so part of: UBQLN4
location: join(461650..461840,463643..463794,465891..466096,466376..466638,467732..467890,468559..468784,469158..469297,469744..469827,470415..470530,471126..471303,471703..472879)
location: region:461650-472879:1
so has part: feature:461650-461840:1:exon
so has part: feature:463643-463794:1:exon
so has part: feature:465891-466096:1:exon
so has part: feature:466376-466638:1:exon
so has part: feature:467732-467890:1:exon
so has part: feature:468559-468784:1:exon
so has part: feature:469158-469297:1:exon
so has part: feature:469744-469827:1:exon
so has part: feature:470415-470530:1:exon
so has part: feature:471126-471303:1:exon
so has part: feature:471703-472879:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:461650-461840:1:exon

position:461840:1
position: 461840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:463643-463794:1:exon

position:463643:1
position: 463643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:463794:1
position: 463794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:465891-466096:1:exon

position:465891:1
position: 465891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:466096:1
position: 466096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:466376-466638:1:exon

position:466376:1
position: 466376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:466638:1
position: 466638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:467732-467890:1:exon

position:467732:1
position: 467732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:467890:1
position: 467890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:468559-468784:1:exon

position:468559:1
position: 468559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:468784:1
position: 468784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:469158-469297:1:exon

position:469158:1
position: 469158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:469297:1
position: 469297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:469744-469827:1:exon

position:469744:1
position: 469744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:469827:1
position: 469827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:470415-470530:1:exon

position:470415:1
position: 470415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:470530:1
position: 470530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:471126-471303:1:exon

position:471126:1
position: 471126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:471303:1
position: 471303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:471703-472879:1:exon

position:471703:1
position: 471703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

UBQLN4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: UBQLN4
product: ubiquilin 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 149 samples with support for all annotated introns
transcript id: XM_030291702.3
SIO_010081: UBQLN4
subclass of: SO_0000673
so part of: UBQLN4
location: join(461650..461840,463643..463794,465891..466096,466376..466638,467732..467890,468559..468784,469158..469297,470415..470530,471126..471303,471703..472879)
location: region:461650-472879:1
so has part: feature:461650-461840:1:exon
so has part: feature:463643-463794:1:exon
so has part: feature:465891-466096:1:exon
so has part: feature:466376-466638:1:exon
so has part: feature:467732-467890:1:exon
so has part: feature:468559-468784:1:exon
so has part: feature:469158-469297:1:exon
so has part: feature:470415-470530:1:exon
so has part: feature:471126-471303:1:exon
so has part: feature:471703-472879:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:461650-461840:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:463643-463794:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:465891-466096:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:466376-466638:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:467732-467890:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:468559-468784:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:469158-469297:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:470415-470530:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:471126-471303:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:471703-472879:1:exon

UBQLN4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: UBQLN4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquilin-4 isoform X1
translation: MAEPSGGGGGGGGPGPGPGPGGDGQAGPGGALIRVTVKTPKDKEEIVIADGASVREFKEEISRRFKAKQDQLVLIFAGKILKDGDTLNQHGIKDGLTVHLVIKTPQKVQDSTSAASAPNAASAPTATPSSPAAPSQPSTSSSAGPDAGSGSRRSSGSGTVGGPGDGGPNSAASILSGFGGIAGLGNLGMGSANFMELQQQMQRQLMSNPEMLSQIMENPLVQNMMSNPDLMRQMIMANPQMQQLMERNPEISHMLNNPELMRQTMELARNPAMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEPMFSAAREQFGSNPFSSLTGNSDSSSSQPLRTENREPLPNPWSPTPPASQSQAPSSEGSTGSATTQGTPTVSNPFGLNAASMGTGMFNSPEMQGLLQQISENPQLMQNMISAPYMRSMMQTLAQNPDFAAQIMVNVPLFAGNPQLQEQLRLQLPVFLQQMQNPDSLSILTNPRAMQALLQIQQGLQTLQTEAPGLVPSLGSFGMPRMPPSSTGGSTIPENPVPSASTPASASPTGGGNPQQQLMQQMIQLLAGGSSQAQSPEVRFQQQLEQLNAMGFINREANLQALIATGGDINAAIERLLGSQPS
SIO_010081: UBQLN4
subclass of: SO_0000673
so part of: UBQLN4
location: join(461673..461840,463643..463794,465891..466096,466376..466638,467732..467890,468559..468784,469158..469297,469744..469827,470415..470530,471126..471303,471703..471855)
location: region:461673-471855:1
so has part: feature:461673-461840:1:exon
so has part: feature:463643-463794:1:exon
so has part: feature:465891-466096:1:exon
so has part: feature:466376-466638:1:exon
so has part: feature:467732-467890:1:exon
so has part: feature:468559-468784:1:exon
so has part: feature:469158-469297:1:exon
so has part: feature:469744-469827:1:exon
so has part: feature:470415-470530:1:exon
so has part: feature:471126-471303:1:exon
so has part: feature:471703-471855:1:exon

XP_030147561.3
type: Protein
SIO_000068: ncbiprotein

position:461673:1
position: 461673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:471855:1
position: 471855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:461673-461840:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:463643-463794:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:465891-466096:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:466376-466638:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:467732-467890:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:468559-468784:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:469158-469297:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:469744-469827:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:470415-470530:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:471126-471303:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:471703-471855:1:exon

UBQLN4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: UBQLN4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquilin-4 isoform X2
translation: MAEPSGGGGGGGGPGPGPGPGGDGQAGPGGALIRVTVKTPKDKEEIVIADGASVREFKEEISRRFKAKQDQLVLIFAGKILKDGDTLNQHGIKDGLTVHLVIKTPQKVQDSTSAASAPNAASAPTATPSSPAAPSQPSTSSSAGPDAGSGSRRSSGSGTVGGPGDGGPNSAASILSGFGGIAGLGNLGMGSANFMELQQQMQRQLMSNPEMLSQIMENPLVQNMMSNPDLMRQMIMANPQMQQLMERNPEISHMLNNPELMRQTMELARNPAMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEPMFSAAREQFGSNPFSSLTGNSDSSSSQPLRTENREPLPNPWSPTPPASQSQAPSSEGSTGSATTQGTPTVSNPFGLNAASMGTGMFNSPEMQGLLQQISENPQLMQNMISAPYMRSMMQTLAQNPDFAAQMQNPDSLSILTNPRAMQALLQIQQGLQTLQTEAPGLVPSLGSFGMPRMPPSSTGGSTIPENPVPSASTPASASPTGGGNPQQQLMQQMIQLLAGGSSQAQSPEVRFQQQLEQLNAMGFINREANLQALIATGGDINAAIERLLGSQPS
SIO_010081: UBQLN4
subclass of: SO_0000673
so part of: UBQLN4
location: join(461673..461840,463643..463794,465891..466096,466376..466638,467732..467890,468559..468784,469158..469297,470415..470530,471126..471303,471703..471855)
location: region:461673-471855:1
so has part: feature:461673-461840:1:exon
so has part: feature:463643-463794:1:exon
so has part: feature:465891-466096:1:exon
so has part: feature:466376-466638:1:exon
so has part: feature:467732-467890:1:exon
so has part: feature:468559-468784:1:exon
so has part: feature:469158-469297:1:exon
so has part: feature:470415-470530:1:exon
so has part: feature:471126-471303:1:exon
so has part: feature:471703-471855:1:exon

XP_030147562.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:461673-461840:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:463643-463794:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:465891-466096:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:466376-466638:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:467732-467890:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:468559-468784:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:469158-469297:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:470415-470530:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:471126-471303:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:471703-471855:1:exon

GPATCH4
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: GPATCH4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 476622..479103
location: region:476622-479103:1
so has part: feature:476622-479103:1:exon
subclass of: SO_0000010

100227946
type: Gene
SIO_000068: ncbigene

position:476622:1
position: 476622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:479103:1
position: 479103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:476622-479103:1:exon

GPATCH4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: GPATCH4
product: G-patch domain containing 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 77 samples with support for all annotated introns
transcript id: XM_030291455.3
SIO_010081: GPATCH4
subclass of: SO_0000673
so part of: GPATCH4
location: join(476622..476956,477193..477266,477353..477445,477581..477688,477782..477879,477996..478046,478163..479103)
location: region:476622-479103:1
so has part: feature:476622-476956:1:exon
so has part: feature:477193-477266:1:exon
so has part: feature:477353-477445:1:exon
so has part: feature:477581-477688:1:exon
so has part: feature:477782-477879:1:exon
so has part: feature:477996-478046:1:exon
so has part: feature:478163-479103:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:476622-476956:1:exon

position:476956:1
position: 476956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:477193-477266:1:exon

position:477193:1
position: 477193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:477266:1
position: 477266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:477353-477445:1:exon

position:477353:1
position: 477353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:477445:1
position: 477445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:477581-477688:1:exon

position:477581:1
position: 477581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:477688:1
position: 477688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:477782-477879:1:exon

position:477782:1
position: 477782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:477879:1
position: 477879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:477996-478046:1:exon

position:477996:1
position: 477996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:478046:1
position: 478046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:478163-479103:1:exon

position:478163:1
position: 478163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GPATCH4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: GPATCH4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G patch domain-containing protein 4
translation: MSAAEPPGRGMLFAETQLRRHGWRRGQGLGRREDGIAEAIRVKVKCDTAGVGHDAAEPFTFHWWDHVFNQAAANIAVEAGQDGISVKALSEPRGSISNKKPRKAGSSGSLLYGRFVKSATLTACGEESVTAPSSEEEEEEEKLDLSSVRRLTDEELVQACGGRTAHKGARHGLTMTAKLARLEEQERAFLATYQQREQQQEPPGSSHGKKKKRKQSRDGANPEEPTREQEEVLEEEKVVKRKKKKRGPSREEELTGEEEVMRKKKKKKKKVITEPCGEEVSGEEEKVMKSRKKPELSTEEEVVEEEGKAAKRRKKKKKKKEEKDQEEQDKEEPAKTDVPLQETDERNLGHSPTKKRKKKKRKREPE
SIO_010081: GPATCH4
subclass of: SO_0000673
so part of: GPATCH4
location: join(476881..476956,477193..477266,477353..477445,477581..477688,477782..477879,477996..478046,478163..478763)
location: region:476881-478763:1
so has part: feature:476881-476956:1:exon
so has part: feature:477193-477266:1:exon
so has part: feature:477353-477445:1:exon
so has part: feature:477581-477688:1:exon
so has part: feature:477782-477879:1:exon
so has part: feature:477996-478046:1:exon
so has part: feature:478163-478763:1:exon

XP_030147315.3
type: Protein
SIO_000068: ncbiprotein

position:476881:1
position: 476881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:478763:1
position: 478763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:476881-476956:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:477193-477266:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:477353-477445:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:477581-477688:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:477782-477879:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:477996-478046:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:478163-478763:1:exon

NAXE
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: NAXE
note: NAD(P)HX epimerase; Derived by automated computational analysis using gene prediction method: BestRefSeq,Gnomon.
so part of: sequence
location: complement(479052..481413)
location: region:479052-481413:-1
so has part: feature:479052-481413:-1:exon
subclass of: SO_0000010

100190383
type: Gene
SIO_000068: ncbigene

position:479052:-1
position: 479052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:481413:-1
position: 481413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:479052-481413:-1:exon

NAXE
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: NAXE
product: NAD(P)HX epimerase
inference: similar to RNA sequence, mRNA (same species):RefSeq:NM_001245614.1
exception: annotated by transcript or proteomic data
note: The RefSeq transcript has 17 substitutions, 3 non-frameshifting indels compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001245614.1
SIO_010081: NAXE
subclass of: SO_0000673
so part of: NAXE
location: complement(join(479052..479572,479655..479802,479887..480000,480113..480223,480917..481025,481143..481413))
location: region:479052-481413:-1
so has part: feature:481143-481413:-1:exon
so has part: feature:480917-481025:-1:exon
so has part: feature:480113-480223:-1:exon
so has part: feature:479887-480000:-1:exon
so has part: feature:479655-479802:-1:exon
so has part: feature:479052-479572:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:481143-481413:-1:exon

position:481143:-1
position: 481143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:480917-481025:-1:exon

position:480917:-1
position: 480917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:481025:-1
position: 481025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:480113-480223:-1:exon

position:480113:-1
position: 480113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:480223:-1
position: 480223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:479887-480000:-1:exon

position:479887:-1
position: 479887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:480000:-1
position: 480000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:479655-479802:-1:exon

position:479655:-1
position: 479655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:479802:-1
position: 479802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:479052-479572:-1:exon

position:479572:-1
position: 479572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NAXE
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: NAXE
product: NAD(P)HX epimerase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 93 samples with support for all annotated introns
transcript id: XM_041720990.1
SIO_010081: NAXE
subclass of: SO_0000673
so part of: NAXE
location: complement(join(479067..479572,479655..479802,479887..480000,480101..480223,480652..480672,480938..481025,481143..481377))
location: region:479067-481377:-1
so has part: feature:481143-481377:-1:exon
so has part: feature:480938-481025:-1:exon
so has part: feature:480652-480672:-1:exon
so has part: feature:480101-480223:-1:exon
so has part: feature:479887-480000:-1:exon
so has part: feature:479655-479802:-1:exon
so has part: feature:479067-479572:-1:exon

position:479067:-1
position: 479067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:481377:-1
position: 481377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:481143-481377:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:480938-481025:-1:exon

position:480938:-1
position: 480938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:480652-480672:-1:exon

position:480652:-1
position: 480652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:480672:-1
position: 480672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:480101-480223:-1:exon

position:480101:-1
position: 480101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:479887-480000:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:479655-479802:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:479067-479572:-1:exon

NAXE
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: NAXE
product: NAD(P)HX epimerase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 105 samples with support for all annotated introns
transcript id: XM_030291144.3
SIO_010081: NAXE
subclass of: SO_0000673
so part of: NAXE
location: complement(join(479067..479572,479655..479802,479887..480000,480101..480223,480917..481025,481143..481375))
location: region:479067-481375:-1
so has part: feature:481143-481375:-1:exon
so has part: feature:480917-481025:-1:exon
so has part: feature:480101-480223:-1:exon
so has part: feature:479887-480000:-1:exon
so has part: feature:479655-479802:-1:exon
so has part: feature:479067-479572:-1:exon

position:481375:-1
position: 481375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:481143-481375:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:480917-481025:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:480101-480223:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:479887-480000:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:479655-479802:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:479067-479572:-1:exon

NAXE
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: NAXE
product: NAD(P)HX epimerase, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 115 samples with support for all annotated introns
transcript id: XM_041720991.1
SIO_010081: NAXE
subclass of: SO_0000673
so part of: NAXE
location: complement(join(479067..479572,479655..479802,479887..480000,480113..480223,480652..480672,480938..481025,481143..481372))
location: region:479067-481372:-1
so has part: feature:481143-481372:-1:exon
so has part: feature:480938-481025:-1:exon
so has part: feature:480652-480672:-1:exon
so has part: feature:480113-480223:-1:exon
so has part: feature:479887-480000:-1:exon
so has part: feature:479655-479802:-1:exon
so has part: feature:479067-479572:-1:exon

position:481372:-1
position: 481372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:481143-481372:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:480938-481025:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:480652-480672:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:480113-480223:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:479887-480000:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:479655-479802:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:479067-479572:-1:exon

NAXE
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: NAXE
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NAD(P)H-hydrate epimerase isoform X3
translation: MPGPRALLGLGLLVAAARAGGRCRERGWSWSWNRGWNRGWERGWERGRCLPHRAMHSPGTARPGPAGLRFLGQEEAQAIDQELFTEYRFSVEQLMELAGLSCATAIAKAYPPSSFTTSQPAVLVVCGPGNNGGDGLVCARHLKMFGYQPTVYYPKRPSKPLFEGLTTQCKKMDIPFLPEFPAEAEFIDELYGLVVDAIFGFSFTGAVREPFGSILSTLERVTVPIASIDIPSGWDVEKGKADGLQPDMLISLTAPKKAAMHFTGRYHFLGGRFVPPALQEKYALNLPAYPGTDCVLQLT
SIO_010081: NAXE
subclass of: SO_0000673
so part of: NAXE
location: complement(join(479370..479572,479655..479802,479887..480000,480113..480223,480652..480672,480938..481025,481143..481357))
location: region:479370-481357:-1
so has part: feature:481143-481357:-1:exon
so has part: feature:480938-481025:-1:exon
so has part: feature:480652-480672:-1:exon
so has part: feature:480113-480223:-1:exon
so has part: feature:479887-480000:-1:exon
so has part: feature:479655-479802:-1:exon
so has part: feature:479370-479572:-1:exon

XP_041576925.1
type: Protein
SIO_000068: ncbiprotein

position:479370:-1
position: 479370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:481357:-1
position: 481357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:481143-481357:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:480938-481025:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:480652-480672:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:480113-480223:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:479887-480000:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:479655-479802:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:479370-479572:-1:exon

NAXE
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: NAXE
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NAD(P)H-hydrate epimerase isoform X2
translation: MPGPRALLGLGLLVAAARAGGRCRERGWSWSWNRGWNRGWERGWERGRCLPHRAMHSPGTARPGPAGLRFLGQEEAQAIDQELFTEYRFSVEQLMELAGLSCATAIAKAYPPSSFTTSQPAVLVVCGPGNNGGDGLVCARHLKMFVSLLGYQPTVYYPKRPSKPLFEGLTTQCKKMDIPFLPEFPAEAEFIDELYGLVVDAIFGFSFTGAVREPFGSILSTLERVTVPIASIDIPSGWDVEKGKADGLQPDMLISLTAPKKAAMHFTGRYHFLGGRFVPPALQEKYALNLPAYPGTDCVLQLT
SIO_010081: NAXE
subclass of: SO_0000673
so part of: NAXE
location: complement(join(479370..479572,479655..479802,479887..480000,480101..480223,480652..480672,480938..481025,481143..481357))
location: region:479370-481357:-1
so has part: feature:481143-481357:-1:exon
so has part: feature:480938-481025:-1:exon
so has part: feature:480652-480672:-1:exon
so has part: feature:480101-480223:-1:exon
so has part: feature:479887-480000:-1:exon
so has part: feature:479655-479802:-1:exon
so has part: feature:479370-479572:-1:exon

XP_041576924.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:481143-481357:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:480938-481025:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:480652-480672:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:480101-480223:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:479887-480000:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:479655-479802:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:479370-479572:-1:exon

NAXE
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: NAXE
inference: similar to AA sequence (same species):RefSeq:NP_001232543.1
exception: annotated by transcript or proteomic data
note: The RefSeq protein has 5 substitutions compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: NAD(P)H-hydrate epimerase precursor
translation: MPGPRALLGLGLLVAAARAGGRCRERGWSWSWNRSWNRGWERGWERDRCLPRRAMHSPGTARPGPAGLRFLGQEEAQAIDQELFTEYGFSVEQLMELAGLSCATAIAKAYPPSSFTTSQPAVLVVCGPGNNGGDGLVCARHLKMFGYQPTVYYPKRPNKPLFEGLTTQCKKMDIPFLPEFPAEAEFIDELYGLVVDAIFGFSFTGAVREPFGSILSTLERVTVPIASIDIPSGWDVEKGKADGLQPDMLISLTAPKKAAMHFTGRYHFLGGRFVPPALQEKYALNLPAYPGTDCVLQLT
SIO_010081: NAXE
subclass of: SO_0000673
so part of: NAXE
location: complement(join(479370..479572,479655..479802,479887..480000,480113..480223,480917..481025,481143..481357))
location: region:479370-481357:-1
so has part: feature:481143-481357:-1:exon
so has part: feature:480917-481025:-1:exon
so has part: feature:480113-480223:-1:exon
so has part: feature:479887-480000:-1:exon
so has part: feature:479655-479802:-1:exon
so has part: feature:479370-479572:-1:exon

NP_001232543.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:481143-481357:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:480917-481025:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:480113-480223:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:479887-480000:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:479655-479802:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:479370-479572:-1:exon

NAXE
type: Signal Peptide
subclass of: SO_0000418
RO_0002162: 59729
gene: NAXE
inference: COORDINATES: ab initio prediction:SignalP:4.0
SIO_010081: NAXE
subclass of: SO_0000673
so part of: NAXE
location: complement(481301..481357)
location: region:481301-481357:-1
so has part: feature:481301-481357:-1:exon

position:481301:-1
position: 481301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:481301-481357:-1:exon

NAXE
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: NAXE
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NAD(P)H-hydrate epimerase isoform X1
translation: MPGPRALLGLGLLVAAARAGGRCRERGWSWSWNRGWNRGWERGWERGRCLPHRAMHSPGTARPGPAGLRFLGQEEAQAIDQELFTEYRFSVEQLMELAGLSCATAIAKAYPPSSFTTSQPAVLVVCGPGNNGGDGLVCARHLKMFVSLLGYQPTVYYPKRPSKPLFEGLTTQCKKMDIPFLPEFPAEAEFIDELYGLVVDAIFGFSFTGAVREPFGSILSTLERVTVPIASIDIPSGWDVEKGKADGLQPDMLISLTAPKKAAMHFTGRYHFLGGRFVPPALQEKYALNLPAYPGTDCVLQLT
SIO_010081: NAXE
subclass of: SO_0000673
so part of: NAXE
location: complement(join(479370..479572,479655..479802,479887..480000,480101..480223,480917..481025,481143..481357))
location: region:479370-481357:-1
so has part: feature:481143-481357:-1:exon
so has part: feature:480917-481025:-1:exon
so has part: feature:480101-480223:-1:exon
so has part: feature:479887-480000:-1:exon
so has part: feature:479655-479802:-1:exon
so has part: feature:479370-479572:-1:exon

XP_030147004.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:481143-481357:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:480917-481025:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:480101-480223:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:479887-480000:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:479655-479802:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:479370-479572:-1:exon

TTC24
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: TTC24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(482716..487711)
location: region:482716-487711:-1
so has part: feature:482716-487711:-1:exon
subclass of: SO_0000010

115498378
type: Gene
SIO_000068: ncbigene

position:482716:-1
position: 482716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:487711:-1
position: 487711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:482716-487711:-1:exon

TTC24
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: TTC24
product: tetratricopeptide repeat domain 24
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041721010.1
SIO_010081: TTC24
subclass of: SO_0000673
so part of: TTC24
location: complement(join(482716..483026,483827..484003,484231..484363,484477..484541,484636..484706,484825..484941,485059..485180,485278..485406,485874..486092,486164..486997,487669..487711))
location: region:482716-487711:-1
so has part: feature:487669-487711:-1:exon
so has part: feature:486164-486997:-1:exon
so has part: feature:485874-486092:-1:exon
so has part: feature:485278-485406:-1:exon
so has part: feature:485059-485180:-1:exon
so has part: feature:484825-484941:-1:exon
so has part: feature:484636-484706:-1:exon
so has part: feature:484477-484541:-1:exon
so has part: feature:484231-484363:-1:exon
so has part: feature:483827-484003:-1:exon
so has part: feature:482716-483026:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:487669-487711:-1:exon

position:487669:-1
position: 487669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:486164-486997:-1:exon

position:486164:-1
position: 486164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:486997:-1
position: 486997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:485874-486092:-1:exon

position:485874:-1
position: 485874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:486092:-1
position: 486092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:485278-485406:-1:exon

position:485278:-1
position: 485278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:485406:-1
position: 485406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:485059-485180:-1:exon

position:485059:-1
position: 485059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:485180:-1
position: 485180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:484825-484941:-1:exon