Taeniopygia guttata isolate Blue55 chromosome 23, bTaeGut1.4.pri, whole genome shotgun sequence.
type: Entry
definition: Taeniopygia guttata isolate Blue55 chromosome 23, bTaeGut1.4.pri, whole genome shotgun sequence.
sequence version: NC_044235.2
sequence date: 2021-05-26
sequence: sequence
division: CON
label: NC_044235.2
type: RefSeq
SIO_000068: refseq
dblink: PRJNA558048
dblink: SAMN02981239
keyword: WGS
keyword: RefSeq
source: Taeniopygia guttata (zebra finch)
organism: Taeniopygia guttata
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Taeniopygia.
reference: 1
references: 33911273
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM012105.2.\nOn May 24, 2021 this sequence version replaced NC_044235.1.\nAssembly name: bTaeGut1.4.pri\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2021/05/04. The original whole-genome shotgun project has the\naccession RRCB00000000.2.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 09-APR-2021\nAssembly Method :: FALCON v. 5.1.1; FALCON unzip v.\n Nov2017(uc4); Purge_dups v. 1.0.1;\n Scaff10X v. 4.1.0; Bionano Solve\n BspQI/BssSI v. 3.4; Salsa2 v. 2.2.; Arrow\n polishing v. variantCaller 2.3.3; Merfin\n filtering v. 0.1; longranger align v.\n 2.2.2; freebayes polishing v. 1.3.1;\n gEVAL manual curation v. 2021-04-09; VGP\n pipeline v. 1.7\nAssembly Name :: bTaeGut1.4.pri\nDiploid :: Principal Pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 88.2x\nSequencing Technology :: PacBio RSII; 10X Genomics linked reads;\n Bionano Genomics two enzymes; Arima\n Genomics Hi-C\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Taeniopygia guttata Annotation\n Release 106\nAnnotation Version :: 106\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.6\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 6804446
topology: linear
so has quality: SO_0000987
location: 1..6804446
location: region:1-6804446:1
RO_0002162: 59729

NC_044235
type: RefSeq
SIO_000068: refseq

PRJNA558048
type: BioProject
SIO_000068: bioproject

SAMN02981239
type: BioSample
SIO_000068: biosample

1
title: Towards complete and error-free genome assemblies of all vertebrate species
author: Rhie, A.
author: McCarthy, S.A.
author: Fedrigo, O.
author: Damas, J.
author: Formenti, G.
author: Koren, S.
author: Uliano-Silva, M.
author: Chow, W.
author: Fungtammasan, A.
author: Kim, J.
author: Lee, C.
author: Ko, B.J.
author: Chaisson, M.
author: Gedman, G.L.
author: Cantin, L.J.
author: Thibaud-Nissen, F.
author: Haggerty, L.
author: Bista, I.
author: Smith, M.
author: Haase, B.
author: Mountcastle, J.
author: Winkler, S.
author: Paez, S.
author: Howard, J.
author: Vernes, S.C.
author: Lama, T.M.
author: Grutzner, F.
author: Warren, W.C.
author: Balakrishnan, C.N.
author: Burt, D.
author: George, J.M.
author: Biegler, M.T.
author: Iorns, D.
author: Digby, A.
author: Eason, D.
author: Robertson, B.
author: Edwards, T.
author: Wilkinson, M.
author: Turner, G.
author: Meyer, A.
author: Kautt, A.F.
author: Franchini, P.
author: Detrich, H.W. 3rd
author: Svardal, H.
author: Wagner, M.
author: Naylor, G.J.P.
author: Pippel, M.
author: Malinsky, M.
author: Mooney, M.
author: Simbirsky, M.
author: Hannigan, B.T.
author: Pesout, T.
author: Houck, M.
author: Misuraca, A.
author: Kingan, S.B.
author: Hall, R.
author: Kronenberg, Z.
author: Sovic, I.
author: Dunn, C.
author: Ning, Z.
author: Hastie, A.
author: Lee, J.
author: Selvaraj, S.
author: Green, R.E.
author: Putnam, N.H.
author: Gut, I.
author: Ghurye, J.
author: Garrison, E.
author: Sims, Y.
author: Collins, J.
author: Pelan, S.
author: Torrance, J.
author: Tracey, A.
author: Wood, J.
author: Dagnew, R.E.
author: Guan, D.
author: London, S.E.
author: Clayton, D.F.

33911273
type: PubMed
SIO_000068: pubmed

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6804446:1
position: 6804446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-6804446:1:source
so part of: sequence
organism: Taeniopygia guttata
mol type: genomic DNA
isolate: Blue55
chromosome: 23
sex: female
tissue type: Muscle, blood, brain
dev stage: adult
country: USA
lat lon: 36.0014 N 78.9382 W
collected by: Matt Biegler, Duke University and Rockefeller University

59729
type: Taxonomy
SIO_000068: taxonomy

LOC115498272
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC115498272
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(10125..20402)
location: region:10125-20402:-1
so has part: feature:10125-20402:-1:exon
subclass of: SO_0000011

115498272
type: Gene
SIO_000068: ncbigene

position:10125:-1
position: 10125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20402:-1
position: 20402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10125-20402:-1:exon

LOC115498272
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC115498272
product: uncharacterized LOC115498272
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XR_003963690.3
SIO_010081: LOC115498272
subclass of: SO_0000673
so part of: LOC115498272
location: complement(join(10125..10562,20115..20402))
location: region:10125-20402:-1
so has part: feature:20115-20402:-1:exon
so has part: feature:10125-10562:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:20115-20402:-1:exon

position:20115:-1
position: 20115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10125-10562:-1:exon

position:10562:-1
position: 10562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HTR1D
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: HTR1D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 28089..37986
location: region:28089-37986:1
so has part: feature:28089-37986:1:exon
subclass of: SO_0000010

100227617
type: Gene
SIO_000068: ncbigene

position:28089:1
position: 28089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37986:1
position: 37986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28089-37986:1:exon

HTR1D
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: HTR1D
product: 5-hydroxytryptamine receptor 1D
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 34 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 100 samples with support for all annotated introns
transcript id: XM_002197812.5
SIO_010081: HTR1D
subclass of: SO_0000673
so part of: HTR1D
location: join(28089..28470,34996..37986)
location: region:28089-37986:1
so has part: feature:28089-28470:1:exon
so has part: feature:34996-37986:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:28089-28470:1:exon

position:28470:1
position: 28470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:34996-37986:1:exon

position:34996:1
position: 34996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HTR1D
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: HTR1D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 5-hydroxytryptamine receptor 1D
translation: MSQYNHSAQLSLQSSANKSLNVTETPLSWDERTLLGLKISLSVLLSVITLATILANVFVVITIFLTRKLHTPANYLIGSLAVTDLLVSVLVMPVSIAYTVTHTWAFGQLLCDIWLSSDITCCTASILHLCVIALDRYWAITDALEYTKRRTAGRAALMIAVVWMISISISVPPFFWRQVKAHEEIATCAVNTDQISYTIYSTCGAFYIPTVLLLILYGRIYVAARSRILKPPSLYGKRFTTAHLITGSAGSSLCSINASLHEGHSHSGGSPIFIGHVKIKLADSVLERKRISAARERKATKTLGIILGAFIFCWLPFFVISLVLPICQDACWFHPILLDFFTWLGYLNSLINPVIYTAFNEEFKQAFQKLILFKKCSS
SIO_010081: HTR1D
subclass of: SO_0000673
so part of: HTR1D
location: 36136..37272
location: region:36136-37272:1
so has part: feature:36136-37272:1:exon

XP_002197848.1
type: Protein
SIO_000068: ncbiprotein

position:36136:1
position: 36136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37272:1
position: 37272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36136-37272:1:exon

LUZP1
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LUZP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 43988..74782
location: region:43988-74782:1
so has part: feature:43988-74782:1:exon
subclass of: SO_0000010

100224781
type: Gene
SIO_000068: ncbigene

position:43988:1
position: 43988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:74782:1
position: 74782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43988-74782:1:exon

LUZP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LUZP1
product: leucine zipper protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 8 long SRA reads, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 85 samples with support for all annotated introns
transcript id: XM_030290536.3
SIO_010081: LUZP1
subclass of: SO_0000673
so part of: LUZP1
location: join(43988..44120,63370..66633,69686..69850,70320..74782)
location: region:43988-74782:1
so has part: feature:43988-44120:1:exon
so has part: feature:63370-66633:1:exon
so has part: feature:69686-69850:1:exon
so has part: feature:70320-74782:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:43988-44120:1:exon

position:44120:1
position: 44120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:63370-66633:1:exon

position:63370:1
position: 63370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:66633:1
position: 66633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:69686-69850:1:exon

position:69686:1
position: 69686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:69850:1
position: 69850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:70320-74782:1:exon

position:70320:1
position: 70320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LUZP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LUZP1
product: leucine zipper protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 5 long SRA reads, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 46 samples with support for all annotated introns
transcript id: XM_012570684.4
SIO_010081: LUZP1
subclass of: SO_0000673
so part of: LUZP1
location: join(49035..50370,63370..66633,69686..69850,70320..74782)
location: region:49035-74782:1
so has part: feature:49035-50370:1:exon
so has part: feature:63370-66633:1:exon
so has part: feature:69686-69850:1:exon
so has part: feature:70320-74782:1:exon

position:49035:1
position: 49035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49035-50370:1:exon

position:50370:1
position: 50370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:63370-66633:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:69686-69850:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:70320-74782:1:exon

LUZP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LUZP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine zipper protein 1
translation: MAECTGYKETSNRHLRFKLQSLSRRLDELEEATKNLQKAEDELLDLQDKVIQAEGSNSSMLADIEALRKRVLKIEGKDEEIRKAEELCRLMKEKLEEEESLTRDLKSEIELLQRRMAELEKLEEAFSRSKNDCTQLCLSLNEEKNLTKKISTELEILRVKVKELESSEDRLDKTEQTLTAELEKLKSLALSFVTERKHFNEREKQNEKIIQELTQKLEQNNKLNRADQTRNASNLLERSSNNLLDRNDMRIEDDLTSALPSKETRRKGSVDYLKHVENETRNKSENQKNKNQEDNKVKDLTQEIEKLKIQIKHFESLEEELKKVRAKNNDLQDSYLSEQNKNKLLTGQLEEIKMQIKKQKDLENGEVENEDTSFSSRGKHDRPKYRGVMTDLTAAKHKPRELSPQQRRERARNRDFSLSNDSYSHSGKRVPSPSLMNRKAGKASALSDTAVTDTRRLEEKSLVSTISSGQKEGCIMQNEGKRSKEQPSVLSRYPPAAQEQKSWKAPSKPVGDTGLRSKVEKPSQVLRGNCQNGADTRDEKSSKGESTGSLSEKLKTSQAEVGECLGDTQLTRGNHTSSNGTASAYRYHVSSSVSVSDSAGSKVEAVSTFAASHRQPSEGRAKRAVMSQEKEAADTSLESVKLSTLTKRSHHSRSQEDILQLLTGLDKEGTEQSSSSATDYVNMGLKTDSKTIQSNQEKLNSDEESGRGKKPTTQSDFETRKKVSSKQFSNSRGVFRASLFENDKKTVNDEDSTKCIKPSDASTGGLKSRRSFSPREALRSKAIIKPAIVEKDMKAIMGGTISEAESDKQKSTFKMVTNKMTSSITIFPSEPTAPRTTADTAAKERHVTTSNIRVASNEREGSSITNNVPSPFEVSINRSALKSPETDRSGEAAPRSKAETVVSRSSIMLKTSELTERNSETPLETISWKSHGSSDAGSSETKHVTVRSSWRTRQGLHSLEDSQTKVEKSATFSATNLCRSSVDLLEGEGNSSKTDILEQTSSRTSSTANSWSGPELGSRRTKSNLSASELLTRRSCASDPAAAAAWQCTTLPDEIKDFVSSSRRKQHGSSEYLLQADTLGKRIATKVELQDPESNSPAPPGLQGEEQGTARACRTSRR
SIO_010081: LUZP1
subclass of: SO_0000673
so part of: LUZP1
location: join(63478..66633,69686..69850,70320..70355)
location: region:63478-70355:1
so has part: feature:63478-66633:1:exon
so has part: feature:69686-69850:1:exon
so has part: feature:70320-70355:1:exon

XP_030146396.3
type: Protein
SIO_000068: ncbiprotein

position:63478:1
position: 63478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:70355:1
position: 70355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63478-66633:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:69686-69850:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:70320-70355:1:exon

LUZP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LUZP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine zipper protein 1
translation: MAECTGYKETSNRHLRFKLQSLSRRLDELEEATKNLQKAEDELLDLQDKVIQAEGSNSSMLADIEALRKRVLKIEGKDEEIRKAEELCRLMKEKLEEEESLTRDLKSEIELLQRRMAELEKLEEAFSRSKNDCTQLCLSLNEEKNLTKKISTELEILRVKVKELESSEDRLDKTEQTLTAELEKLKSLALSFVTERKHFNEREKQNEKIIQELTQKLEQNNKLNRADQTRNASNLLERSSNNLLDRNDMRIEDDLTSALPSKETRRKGSVDYLKHVENETRNKSENQKNKNQEDNKVKDLTQEIEKLKIQIKHFESLEEELKKVRAKNNDLQDSYLSEQNKNKLLTGQLEEIKMQIKKQKDLENGEVENEDTSFSSRGKHDRPKYRGVMTDLTAAKHKPRELSPQQRRERARNRDFSLSNDSYSHSGKRVPSPSLMNRKAGKASALSDTAVTDTRRLEEKSLVSTISSGQKEGCIMQNEGKRSKEQPSVLSRYPPAAQEQKSWKAPSKPVGDTGLRSKVEKPSQVLRGNCQNGADTRDEKSSKGESTGSLSEKLKTSQAEVGECLGDTQLTRGNHTSSNGTASAYRYHVSSSVSVSDSAGSKVEAVSTFAASHRQPSEGRAKRAVMSQEKEAADTSLESVKLSTLTKRSHHSRSQEDILQLLTGLDKEGTEQSSSSATDYVNMGLKTDSKTIQSNQEKLNSDEESGRGKKPTTQSDFETRKKVSSKQFSNSRGVFRASLFENDKKTVNDEDSTKCIKPSDASTGGLKSRRSFSPREALRSKAIIKPAIVEKDMKAIMGGTISEAESDKQKSTFKMVTNKMTSSITIFPSEPTAPRTTADTAAKERHVTTSNIRVASNEREGSSITNNVPSPFEVSINRSALKSPETDRSGEAAPRSKAETVVSRSSIMLKTSELTERNSETPLETISWKSHGSSDAGSSETKHVTVRSSWRTRQGLHSLEDSQTKVEKSATFSATNLCRSSVDLLEGEGNSSKTDILEQTSSRTSSTANSWSGPELGSRRTKSNLSASELLTRRSCASDPAAAAAWQCTTLPDEIKDFVSSSRRKQHGSSEYLLQADTLGKRIATKVELQDPESNSPAPPGLQGEEQGTARACRTSRR
SIO_010081: LUZP1
subclass of: SO_0000673
so part of: LUZP1
location: join(63478..66633,69686..69850,70320..70355)
location: region:63478-70355:1
so has part: feature:63478-66633:1:exon
so has part: feature:69686-69850:1:exon
so has part: feature:70320-70355:1:exon

XP_012426138.4
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:63478-66633:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:69686-69850:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:70320-70355:1:exon

KDM1A
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: KDM1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(75492..103085)
location: region:75492-103085:-1
so has part: feature:75492-103085:-1:exon
subclass of: SO_0000010

100221744
type: Gene
SIO_000068: ncbigene

position:75492:-1
position: 75492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:103085:-1
position: 103085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:75492-103085:-1:exon

KDM1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: KDM1A
product: lysine demethylase 1A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 118 samples with support for all annotated introns
transcript id: XM_030290540.3
SIO_010081: KDM1A
subclass of: SO_0000673
so part of: KDM1A
location: complement(join(75492..76281,77540..77686,78043..78170,79218..79332,79696..79883,80614..80746,81126..81237,81893..81966,82931..83065,83817..83907,84379..84521,85369..85463,86528..86609,87438..87544,88260..88352,89257..89335,91013..91146,99754..99919,102786..103085))
location: region:75492-103085:-1
so has part: feature:102786-103085:-1:exon
so has part: feature:99754-99919:-1:exon
so has part: feature:91013-91146:-1:exon
so has part: feature:89257-89335:-1:exon
so has part: feature:88260-88352:-1:exon
so has part: feature:87438-87544:-1:exon
so has part: feature:86528-86609:-1:exon
so has part: feature:85369-85463:-1:exon
so has part: feature:84379-84521:-1:exon
so has part: feature:83817-83907:-1:exon
so has part: feature:82931-83065:-1:exon
so has part: feature:81893-81966:-1:exon
so has part: feature:81126-81237:-1:exon
so has part: feature:80614-80746:-1:exon
so has part: feature:79696-79883:-1:exon
so has part: feature:79218-79332:-1:exon
so has part: feature:78043-78170:-1:exon
so has part: feature:77540-77686:-1:exon
so has part: feature:75492-76281:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:102786-103085:-1:exon

position:102786:-1
position: 102786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:99754-99919:-1:exon

position:99754:-1
position: 99754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:99919:-1
position: 99919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:91013-91146:-1:exon

position:91013:-1
position: 91013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:91146:-1
position: 91146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:89257-89335:-1:exon

position:89257:-1
position: 89257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:89335:-1
position: 89335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:88260-88352:-1:exon

position:88260:-1
position: 88260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:88352:-1
position: 88352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:87438-87544:-1:exon

position:87438:-1
position: 87438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:87544:-1
position: 87544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:86528-86609:-1:exon

position:86528:-1
position: 86528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:86609:-1
position: 86609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:85369-85463:-1:exon

position:85369:-1
position: 85369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:85463:-1
position: 85463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:84379-84521:-1:exon

position:84379:-1
position: 84379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:84521:-1
position: 84521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:83817-83907:-1:exon

position:83817:-1
position: 83817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:83907:-1
position: 83907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:82931-83065:-1:exon

position:82931:-1
position: 82931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:83065:-1
position: 83065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:81893-81966:-1:exon

position:81893:-1
position: 81893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:81966:-1
position: 81966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:81126-81237:-1:exon

position:81126:-1
position: 81126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:81237:-1
position: 81237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:80614-80746:-1:exon

position:80614:-1
position: 80614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:80746:-1
position: 80746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:79696-79883:-1:exon

position:79696:-1
position: 79696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:79883:-1
position: 79883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:79218-79332:-1:exon

position:79218:-1
position: 79218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:79332:-1
position: 79332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:78043-78170:-1:exon

position:78043:-1
position: 78043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:78170:-1
position: 78170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:77540-77686:-1:exon

position:77540:-1
position: 77540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:77686:-1
position: 77686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:75492-76281:-1:exon

position:76281:-1
position: 76281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KDM1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: KDM1A
product: lysine demethylase 1A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 116 samples with support for all annotated introns
transcript id: XM_030290538.3
SIO_010081: KDM1A
subclass of: SO_0000673
so part of: KDM1A
location: complement(join(75492..76281,77540..77686,78043..78170,79218..79332,79696..79883,80614..80746,81126..81237,81893..81966,82931..83065,83817..83907,84379..84521,85369..85463,86528..86609,87438..87544,88260..88352,89257..89335,91013..91146,94884..94943,99754..99919,102786..103085))
location: region:75492-103085:-1
so has part: feature:102786-103085:-1:exon
so has part: feature:99754-99919:-1:exon
so has part: feature:94884-94943:-1:exon
so has part: feature:91013-91146:-1:exon
so has part: feature:89257-89335:-1:exon
so has part: feature:88260-88352:-1:exon
so has part: feature:87438-87544:-1:exon
so has part: feature:86528-86609:-1:exon
so has part: feature:85369-85463:-1:exon
so has part: feature:84379-84521:-1:exon
so has part: feature:83817-83907:-1:exon
so has part: feature:82931-83065:-1:exon
so has part: feature:81893-81966:-1:exon
so has part: feature:81126-81237:-1:exon
so has part: feature:80614-80746:-1:exon
so has part: feature:79696-79883:-1:exon
so has part: feature:79218-79332:-1:exon
so has part: feature:78043-78170:-1:exon
so has part: feature:77540-77686:-1:exon
so has part: feature:75492-76281:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:102786-103085:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:99754-99919:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:94884-94943:-1:exon

position:94884:-1
position: 94884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:94943:-1
position: 94943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:91013-91146:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:89257-89335:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:88260-88352:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:87438-87544:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:86528-86609:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:85369-85463:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:84379-84521:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:83817-83907:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:82931-83065:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:81893-81966:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:81126-81237:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:80614-80746:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:79696-79883:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:79218-79332:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:78043-78170:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:77540-77686:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:75492-76281:-1:exon

KDM1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: KDM1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysine-specific histone demethylase 1A isoform X2
translation: MLAGGKKGAEAAAGGEAGPEAPVPPPAAAGALGSSSDSGGASERTPRKKEPPRASPPGGASEPSAVGATPAPGAETTGIAETPEGRRTSRRKRAKVEYREMDESLANLSEDEYYSEEERNAKAEKEKKLPPPPPPAPAEEENESEPEEPSGVEGAAFQSRLPHDRMTSQEAACFPDIISGPQQTQKVFLYIRNRTLQLWLDNPKIQLTFEATIQQLEAPYNSDTVLVHRVHSYLERHGLINFGIYKRVKPLPTKKTGKVIIIGSGVSGLAAARQLQSFGMDVTVLEARDRVGGRVATFRKGNYVADLGAMVVTGLGGNPMAVVSKQVNMELAKIKQKCPLYEANGQAVPKEKDEMVEQEFNRLLEATSYLSHQLDFNVLNNKPVSLGQALEVVIQLQEKHVKDEQIEHWKKIVKTQEELKDLLNKMVNLKEKIKELHQQYKEASEVKPPRDITAEFLVKSKHRDLTALCKEYDELAETQGKLEEKLQELEANPPSDVYLSSRDRQILDWHFANLEFANATPLSTLSLKHWDQDDDFEFTGSHLTVRNGYSCVPVALAEGLDIKLNTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPAVQFVPPLPEWKTSAVQRMGFGNLNKVVLCFDRVFWDPSVNLFGHVGSTTASRGELFLFWNLYKAPILLALVAGEAAGIMENISDDVIVGRCLAILKGIFGSSAVPQPKETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPITPGPAIPGAPQPIPRLFFAGEHTIRNYPATVHGALLSGLREAGRIADQFLGAMYTLPRQPTPGVPPQQAASM
SIO_010081: KDM1A
subclass of: SO_0000673
so part of: KDM1A
location: complement(join(76096..76281,77540..77686,78043..78170,79218..79332,79696..79883,80614..80746,81126..81237,81893..81966,82931..83065,83817..83907,84379..84521,85369..85463,86528..86609,87438..87544,88260..88352,89257..89335,91013..91146,99754..99919,102786..103070))
location: region:76096-103070:-1
so has part: feature:102786-103070:-1:exon
so has part: feature:99754-99919:-1:exon
so has part: feature:91013-91146:-1:exon
so has part: feature:89257-89335:-1:exon
so has part: feature:88260-88352:-1:exon
so has part: feature:87438-87544:-1:exon
so has part: feature:86528-86609:-1:exon
so has part: feature:85369-85463:-1:exon
so has part: feature:84379-84521:-1:exon
so has part: feature:83817-83907:-1:exon
so has part: feature:82931-83065:-1:exon
so has part: feature:81893-81966:-1:exon
so has part: feature:81126-81237:-1:exon
so has part: feature:80614-80746:-1:exon
so has part: feature:79696-79883:-1:exon
so has part: feature:79218-79332:-1:exon
so has part: feature:78043-78170:-1:exon
so has part: feature:77540-77686:-1:exon
so has part: feature:76096-76281:-1:exon

XP_030146400.1
type: Protein
SIO_000068: ncbiprotein

position:76096:-1
position: 76096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:103070:-1
position: 103070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:102786-103070:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:99754-99919:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:91013-91146:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:89257-89335:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:88260-88352:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:87438-87544:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:86528-86609:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:85369-85463:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:84379-84521:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:83817-83907:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:82931-83065:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:81893-81966:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:81126-81237:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:80614-80746:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:79696-79883:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:79218-79332:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:78043-78170:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:77540-77686:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:76096-76281:-1:exon

KDM1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: KDM1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysine-specific histone demethylase 1A isoform X1
translation: MLAGGKKGAEAAAGGEAGPEAPVPPPAAAGALGSSSDSGGASERTPRKKEPPRASPPGGASEPSAVGATPAPGAETTGIAETPEGRRTSRRKRAKVEYREMDESLANLSEDEYYSEEERNAKAEKEKKLPPPPPPAPAEEENESEPEEPSGQAGGLQDDSSGGYGDGQASGVEGAAFQSRLPHDRMTSQEAACFPDIISGPQQTQKVFLYIRNRTLQLWLDNPKIQLTFEATIQQLEAPYNSDTVLVHRVHSYLERHGLINFGIYKRVKPLPTKKTGKVIIIGSGVSGLAAARQLQSFGMDVTVLEARDRVGGRVATFRKGNYVADLGAMVVTGLGGNPMAVVSKQVNMELAKIKQKCPLYEANGQAVPKEKDEMVEQEFNRLLEATSYLSHQLDFNVLNNKPVSLGQALEVVIQLQEKHVKDEQIEHWKKIVKTQEELKDLLNKMVNLKEKIKELHQQYKEASEVKPPRDITAEFLVKSKHRDLTALCKEYDELAETQGKLEEKLQELEANPPSDVYLSSRDRQILDWHFANLEFANATPLSTLSLKHWDQDDDFEFTGSHLTVRNGYSCVPVALAEGLDIKLNTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPAVQFVPPLPEWKTSAVQRMGFGNLNKVVLCFDRVFWDPSVNLFGHVGSTTASRGELFLFWNLYKAPILLALVAGEAAGIMENISDDVIVGRCLAILKGIFGSSAVPQPKETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPITPGPAIPGAPQPIPRLFFAGEHTIRNYPATVHGALLSGLREAGRIADQFLGAMYTLPRQPTPGVPPQQAASM
SIO_010081: KDM1A
subclass of: SO_0000673
so part of: KDM1A
location: complement(join(76096..76281,77540..77686,78043..78170,79218..79332,79696..79883,80614..80746,81126..81237,81893..81966,82931..83065,83817..83907,84379..84521,85369..85463,86528..86609,87438..87544,88260..88352,89257..89335,91013..91146,94884..94943,99754..99919,102786..103070))
location: region:76096-103070:-1
so has part: feature:102786-103070:-1:exon
so has part: feature:99754-99919:-1:exon
so has part: feature:94884-94943:-1:exon
so has part: feature:91013-91146:-1:exon
so has part: feature:89257-89335:-1:exon
so has part: feature:88260-88352:-1:exon
so has part: feature:87438-87544:-1:exon
so has part: feature:86528-86609:-1:exon
so has part: feature:85369-85463:-1:exon
so has part: feature:84379-84521:-1:exon
so has part: feature:83817-83907:-1:exon
so has part: feature:82931-83065:-1:exon
so has part: feature:81893-81966:-1:exon
so has part: feature:81126-81237:-1:exon
so has part: feature:80614-80746:-1:exon
so has part: feature:79696-79883:-1:exon
so has part: feature:79218-79332:-1:exon
so has part: feature:78043-78170:-1:exon
so has part: feature:77540-77686:-1:exon
so has part: feature:76096-76281:-1:exon

XP_030146398.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:102786-103070:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:99754-99919:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:94884-94943:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:91013-91146:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:89257-89335:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:88260-88352:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:87438-87544:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:86528-86609:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:85369-85463:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:84379-84521:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:83817-83907:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:82931-83065:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:81893-81966:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:81126-81237:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:80614-80746:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:79696-79883:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:79218-79332:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:78043-78170:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:77540-77686:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:76096-76281:-1:exon

ZMPSTE24
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: ZMPSTE24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(105386..118276)
location: region:105386-118276:-1
so has part: feature:105386-118276:-1:exon
subclass of: SO_0000010

100231385
type: Gene
SIO_000068: ncbigene

position:105386:-1
position: 105386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:118276:-1
position: 118276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:105386-118276:-1:exon

ZMPSTE24
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: ZMPSTE24
product: zinc metallopeptidase STE24
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 12 long SRA reads, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 143 samples with support for all annotated introns
transcript id: XM_030290320.3
SIO_010081: ZMPSTE24
subclass of: SO_0000673
so part of: ZMPSTE24
location: complement(join(105386..107149,107454..107597,108305..108409,109757..109917,110581..110722,113323..113475,113786..113902,114490..114576,116831..116977,118129..118276))
location: region:105386-118276:-1
so has part: feature:118129-118276:-1:exon
so has part: feature:116831-116977:-1:exon
so has part: feature:114490-114576:-1:exon
so has part: feature:113786-113902:-1:exon
so has part: feature:113323-113475:-1:exon
so has part: feature:110581-110722:-1:exon
so has part: feature:109757-109917:-1:exon
so has part: feature:108305-108409:-1:exon
so has part: feature:107454-107597:-1:exon
so has part: feature:105386-107149:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:118129-118276:-1:exon

position:118129:-1
position: 118129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:116831-116977:-1:exon

position:116831:-1
position: 116831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:116977:-1
position: 116977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:114490-114576:-1:exon

position:114490:-1
position: 114490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:114576:-1
position: 114576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:113786-113902:-1:exon

position:113786:-1
position: 113786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:113902:-1
position: 113902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:113323-113475:-1:exon

position:113323:-1
position: 113323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:113475:-1
position: 113475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:110581-110722:-1:exon

position:110581:-1
position: 110581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:110722:-1
position: 110722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:109757-109917:-1:exon

position:109757:-1
position: 109757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:109917:-1
position: 109917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:108305-108409:-1:exon

position:108305:-1
position: 108305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:108409:-1
position: 108409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:107454-107597:-1:exon

position:107454:-1
position: 107454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:107597:-1
position: 107597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:105386-107149:-1:exon

position:107149:-1
position: 107149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZMPSTE24
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: ZMPSTE24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CAAX prenyl protease 1 homolog
translation: MALSGDLWTELPAERRIFCSVLLFSWAVYLWEAFLAHRQRRVYRTTTHVPQELGQIMDSETFEKSRLYQLDKSTFSFWSGLYSEVEGTMILLCGGIPFLWKLSGQISGRAGFGPEYEIVQSLVFLLLATLFSAVTGLPWSLYNTFVIEEKHGFNQQTLGFFFKDAIKKFVVTQCILLPVTSLLLYIIKIGGDYFFIYAWLFTLVVSLVLVTIYADYIAPLFDKFIPLPEGELKQQIETMAKSIDFPLTKVYVVEGSKRSSHSNAYFYGFFKNKRIVLFDTLLEDYSALNKEPAEGEDGENEETKSKTKNKKQGCKNEEVLAVLGHELGHWKLGHTIKNIIISQMNSFLCFFLFAVLIGQKELFAAFGFYDTQPTLIGLMIIFQFIFSPYNEVLSFCLTVLSRRFEFQADAFAKELGKAKDLYSALIKLNKDNLGFPVSDWIFSMWHYSHPPLLERLQALKDAKQE
SIO_010081: ZMPSTE24
subclass of: SO_0000673
so part of: ZMPSTE24
location: complement(join(106925..107149,107454..107597,108305..108409,109757..109917,110581..110722,113323..113475,113786..113902,114490..114576,116831..116977,118129..118245))
location: region:106925-118245:-1
so has part: feature:118129-118245:-1:exon
so has part: feature:116831-116977:-1:exon
so has part: feature:114490-114576:-1:exon
so has part: feature:113786-113902:-1:exon
so has part: feature:113323-113475:-1:exon
so has part: feature:110581-110722:-1:exon
so has part: feature:109757-109917:-1:exon
so has part: feature:108305-108409:-1:exon
so has part: feature:107454-107597:-1:exon
so has part: feature:106925-107149:-1:exon

XP_030146180.1
type: Protein
SIO_000068: ncbiprotein

position:106925:-1
position: 106925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:118245:-1
position: 118245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:118129-118245:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:116831-116977:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:114490-114576:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:113786-113902:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:113323-113475:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:110581-110722:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:109757-109917:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:108305-108409:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:107454-107597:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:106925-107149:-1:exon

RLF
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: RLF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(121610..162982)
location: region:121610-162982:-1
so has part: feature:121610-162982:-1:exon
subclass of: SO_0000010

100225646
type: Gene
SIO_000068: ncbigene

position:121610:-1
position: 121610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:162982:-1
position: 162982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:121610-162982:-1:exon

RLF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: RLF
product: RLF zinc finger, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 3 long SRA reads, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 73 samples with support for all annotated introns
transcript id: XM_030290314.3
SIO_010081: RLF
subclass of: SO_0000673
so part of: RLF
location: complement(join(121610..126748,126917..127058,129228..129364,133593..133795,142525..142657,151502..151583,157494..157648,162748..162982))
location: region:121610-162982:-1
so has part: feature:162748-162982:-1:exon
so has part: feature:157494-157648:-1:exon
so has part: feature:151502-151583:-1:exon
so has part: feature:142525-142657:-1:exon
so has part: feature:133593-133795:-1:exon
so has part: feature:129228-129364:-1:exon
so has part: feature:126917-127058:-1:exon
so has part: feature:121610-126748:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:162748-162982:-1:exon

position:162748:-1
position: 162748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:157494-157648:-1:exon

position:157494:-1
position: 157494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:157648:-1
position: 157648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:151502-151583:-1:exon

position:151502:-1
position: 151502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:151583:-1
position: 151583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:142525-142657:-1:exon

position:142525:-1
position: 142525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:142657:-1
position: 142657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:133593-133795:-1:exon

position:133593:-1
position: 133593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:133795:-1
position: 133795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:129228-129364:-1:exon

position:129228:-1
position: 129228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:129364:-1
position: 129364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:126917-127058:-1:exon

position:126917:-1
position: 126917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:127058:-1
position: 127058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:121610-126748:-1:exon

position:126748:-1
position: 126748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RLF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: RLF
product: RLF zinc finger, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_030290315.3
SIO_010081: RLF
subclass of: SO_0000673
so part of: RLF
location: complement(join(121610..126748,126917..127058,129228..129364,133593..133795,142525..142657,157494..157602))
location: region:121610-157602:-1
so has part: feature:157494-157602:-1:exon
so has part: feature:142525-142657:-1:exon
so has part: feature:133593-133795:-1:exon
so has part: feature:129228-129364:-1:exon
so has part: feature:126917-127058:-1:exon
so has part: feature:121610-126748:-1:exon

position:157602:-1
position: 157602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:157494-157602:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:142525-142657:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:133593-133795:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:129228-129364:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:126917-127058:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:121610-126748:-1:exon

RLF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: RLF
product: RLF zinc finger, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_030290316.3
SIO_010081: RLF
subclass of: SO_0000673
so part of: RLF
location: complement(join(121610..126748,126917..127058,129228..129364,133593..133795,151502..151584))
location: region:121610-151584:-1
so has part: feature:151502-151584:-1:exon
so has part: feature:133593-133795:-1:exon
so has part: feature:129228-129364:-1:exon
so has part: feature:126917-127058:-1:exon
so has part: feature:121610-126748:-1:exon

position:151584:-1
position: 151584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:151502-151584:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:133593-133795:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:129228-129364:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:126917-127058:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:121610-126748:-1:exon

RLF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: RLF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein Rlf isoform X1
translation: MRSAAGHVSGAYARRGRAQMADAEAEAAAAAARPEVPRVVAALRARLWQLQTELREQEVSEASSRAYCRGFCQTLLQYAGSRGASEHILPFLEVYRISIQSFANARPYLTTECEDVLLVLGRLVLSCFELLLSIPESELPHEVWLGFHQSIQDSHDALLEFGNNNLQILVDITREGVWKNPVLLKILSQQPVETEEANKLITREGPSFLQMRIKHLMKSNCIPQATFLSKLCADSPEIANVSSFRQAYITCVCSMLPNEDSIKEIAKVDCKEVLDIICNLESEGQENTAFILCTTYLTHQLQTANVYCSWELTLFWSKLQRRIDPSLDSFLERCRQFGIIAKTLQHLFFLIRVIQSEAEEAGLAVSVLLCVRALQIRSNGSDEMKTSVCKTIACLLPEDLEVRRACQLTEFLLEPTLSGFNALEELYMQPDQKFDEENALVPNSLRCELLLALKAYWPFDPEFWDWKTLKRHCLKLLGKVASDSEDDVGCHMSLNETDMLETFFSDYDETKDHKYYDGKDTMSHPKEKARVKKPIGSSERYQRWLQYKFFCVLCKRECIEARILHHSKMHMEDGIYTCPVCTKKFKRKEFFVPHVMEHVKMPPSRTHRPKKKIILKKERSPQKATASSSPPPVFPERSHQVQLPESFDDDTEEYVTFSQLENCQLQDRDIYPCPGTDCSRVFKQFKYLSVHLKAEHQNNDENAKHYLDMKNRREKCAFCRRHFMTSFHLREHERVHCGPQPYMCVSMDCYARFGSVNELLNHKQTHDDLRYKCELNGCNIVFSDLGQLYHHEAQHFRDASYTCNYFGCKKFYYSKTEFQNHLAAHDIKVSNGEGKQTLNLQGLVSEEKSRYLPESRLLEQSEDSNLNDNFDPSGSQEIPQVKEESLSDSEDLNSESNCSLHCGKHRADAAASQGQASPRLLGTVAHNQSVPGFVMSQEGVFHPANMKQQCSNVAVCFDEKSLSCGFEGCCSTHKNSRSMQKHLRRAHPYNFKGRKNMEMKTKYFLDLLSDAQDSKSPTDMSPELGHNSDTNADSPESVYCAVDAKGSSDLREETCPSSPETSFYDSSKELDIEDNMLELMLGLKHLSLKNANIQNSSRQKSFLGYSSRDAKCPESVDETTSKFHLQEQEDNLPSQYLTQLAAKPFFCECHGCTCEFVTREALLMHYVKKHNYSKEVVLQLNMFQHRYSPFKCHICQRSFTRKTHLRIHYRNKHQIGCQMVAHKACPNEKFDHVGLCTEDMHKNSSAPVPACANSVGFSGHSDSEQLCHPKKEDCSSETDLESNEETDNDVTRKTSNITSLDSHREELEARQGRGSKRTVAKGNLCYILHKYHKPFHCIHKSCNSAFTNQKGLIRHYRTVHQYNKEQLCLEKDKARTKRELVKCKKIFACKHKECGKRFLCSKALARHCSDFHNEILEDQKLISEAESARFACNQAHCHAVFYTFNKLKRHLIEEHANEEKLNKDFEIHCDLNGCNRIFTNYSNYSQHVYFRHNEYYDSLFGNRKEDDDEDKNEQNCLKDSFSTSKQNGKQLKGKVKRISRSREKHSLNFKTKEEALQMCKEKSNQTQYPCMVQGCMSVVKLESSILRHYKRTHQMTNMYIEQRLQKLVLCVKCGIMTEKQSCSGTASGLDKKGVEMNEDKPADSEPVQESDKPLVPKPACDPPDESNEDQKQCSPSSVNCDASAFVYAGTLKYNHSSKNTCFEEPNTGETTVCKTEDLSESSERENSSSSSSLQLDLPREKEPEECQHSAVNQNAKRNVLCATKDKFQKPPVSKPFDLKTYKPMGFESSFLKFIQECEGKDDDDDDDDCDEVVEWESPEQLPVDETLQKEGDSQGNTPVNNFVSDENVIMTPNNPGQLTEIQPLLSESSSAPSLENLRAILDKALTDCGDLALKQLHYLRPVVVLERSKFSTPLIDLFPTKKADELCVGST
SIO_010081: RLF
subclass of: SO_0000673
so part of: RLF
location: complement(join(122024..126748,126917..127058,129228..129364,133593..133795,142525..142657,151502..151583,157494..157648,162748..162966))
location: region:122024-162966:-1
so has part: feature:162748-162966:-1:exon
so has part: feature:157494-157648:-1:exon
so has part: feature:151502-151583:-1:exon
so has part: feature:142525-142657:-1:exon
so has part: feature:133593-133795:-1:exon
so has part: feature:129228-129364:-1:exon
so has part: feature:126917-127058:-1:exon
so has part: feature:122024-126748:-1:exon

XP_030146174.3
type: Protein
SIO_000068: ncbiprotein

position:122024:-1
position: 122024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:162966:-1
position: 162966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:162748-162966:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:157494-157648:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:151502-151583:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:142525-142657:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:133593-133795:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:129228-129364:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:126917-127058:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:122024-126748:-1:exon

RLF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: RLF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein Rlf isoform X2
translation: MRIKHLMKSNCIPQATFLSKLCADSPEIANVSSFRQAYITCVCSMLPNEDSIKEIAKVDCKEVLDIICNLESEGQENTAFILCTTYLTHQLQTANVYCSWELTLFWSKLQRRIDPSLDSFLERCRQFGIIAKTLQHLFFLIRVIQSEAEEAGLAVSVLLCVRALQIRSNGSDEMKTSVCKTIACLLPEDLEVRRACQLTEFLLEPTLSGFNALEELYMQPDQKFDEENALVPNSLRCELLLALKAYWPFDPEFWDWKTLKRHCLKLLGKVASDSEDDVGCHMSLNETDMLETFFSDYDETKDHKYYDGKDTMSHPKEKARVKKPIGSSERYQRWLQYKFFCVLCKRECIEARILHHSKMHMEDGIYTCPVCTKKFKRKEFFVPHVMEHVKMPPSRTHRPKKKIILKKERSPQKATASSSPPPVFPERSHQVQLPESFDDDTEEYVTFSQLENCQLQDRDIYPCPGTDCSRVFKQFKYLSVHLKAEHQNNDENAKHYLDMKNRREKCAFCRRHFMTSFHLREHERVHCGPQPYMCVSMDCYARFGSVNELLNHKQTHDDLRYKCELNGCNIVFSDLGQLYHHEAQHFRDASYTCNYFGCKKFYYSKTEFQNHLAAHDIKVSNGEGKQTLNLQGLVSEEKSRYLPESRLLEQSEDSNLNDNFDPSGSQEIPQVKEESLSDSEDLNSESNCSLHCGKHRADAAASQGQASPRLLGTVAHNQSVPGFVMSQEGVFHPANMKQQCSNVAVCFDEKSLSCGFEGCCSTHKNSRSMQKHLRRAHPYNFKGRKNMEMKTKYFLDLLSDAQDSKSPTDMSPELGHNSDTNADSPESVYCAVDAKGSSDLREETCPSSPETSFYDSSKELDIEDNMLELMLGLKHLSLKNANIQNSSRQKSFLGYSSRDAKCPESVDETTSKFHLQEQEDNLPSQYLTQLAAKPFFCECHGCTCEFVTREALLMHYVKKHNYSKEVVLQLNMFQHRYSPFKCHICQRSFTRKTHLRIHYRNKHQIGCQMVAHKACPNEKFDHVGLCTEDMHKNSSAPVPACANSVGFSGHSDSEQLCHPKKEDCSSETDLESNEETDNDVTRKTSNITSLDSHREELEARQGRGSKRTVAKGNLCYILHKYHKPFHCIHKSCNSAFTNQKGLIRHYRTVHQYNKEQLCLEKDKARTKRELVKCKKIFACKHKECGKRFLCSKALARHCSDFHNEILEDQKLISEAESARFACNQAHCHAVFYTFNKLKRHLIEEHANEEKLNKDFEIHCDLNGCNRIFTNYSNYSQHVYFRHNEYYDSLFGNRKEDDDEDKNEQNCLKDSFSTSKQNGKQLKGKVKRISRSREKHSLNFKTKEEALQMCKEKSNQTQYPCMVQGCMSVVKLESSILRHYKRTHQMTNMYIEQRLQKLVLCVKCGIMTEKQSCSGTASGLDKKGVEMNEDKPADSEPVQESDKPLVPKPACDPPDESNEDQKQCSPSSVNCDASAFVYAGTLKYNHSSKNTCFEEPNTGETTVCKTEDLSESSERENSSSSSSLQLDLPREKEPEECQHSAVNQNAKRNVLCATKDKFQKPPVSKPFDLKTYKPMGFESSFLKFIQECEGKDDDDDDDDCDEVVEWESPEQLPVDETLQKEGDSQGNTPVNNFVSDENVIMTPNNPGQLTEIQPLLSESSSAPSLENLRAILDKALTDCGDLALKQLHYLRPVVVLERSKFSTPLIDLFPTKKADELCVGST
SIO_010081: RLF
subclass of: SO_0000673
so part of: RLF
location: complement(join(122024..126748,126917..127058,129228..129364,133593..133754))
location: region:122024-133754:-1
so has part: feature:133593-133754:-1:exon
so has part: feature:129228-129364:-1:exon
so has part: feature:126917-127058:-1:exon
so has part: feature:122024-126748:-1:exon

XP_030146175.3
type: Protein
SIO_000068: ncbiprotein

position:133754:-1
position: 133754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133593-133754:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:129228-129364:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:126917-127058:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:122024-126748:-1:exon

RLF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: RLF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein Rlf isoform X2
translation: MRIKHLMKSNCIPQATFLSKLCADSPEIANVSSFRQAYITCVCSMLPNEDSIKEIAKVDCKEVLDIICNLESEGQENTAFILCTTYLTHQLQTANVYCSWELTLFWSKLQRRIDPSLDSFLERCRQFGIIAKTLQHLFFLIRVIQSEAEEAGLAVSVLLCVRALQIRSNGSDEMKTSVCKTIACLLPEDLEVRRACQLTEFLLEPTLSGFNALEELYMQPDQKFDEENALVPNSLRCELLLALKAYWPFDPEFWDWKTLKRHCLKLLGKVASDSEDDVGCHMSLNETDMLETFFSDYDETKDHKYYDGKDTMSHPKEKARVKKPIGSSERYQRWLQYKFFCVLCKRECIEARILHHSKMHMEDGIYTCPVCTKKFKRKEFFVPHVMEHVKMPPSRTHRPKKKIILKKERSPQKATASSSPPPVFPERSHQVQLPESFDDDTEEYVTFSQLENCQLQDRDIYPCPGTDCSRVFKQFKYLSVHLKAEHQNNDENAKHYLDMKNRREKCAFCRRHFMTSFHLREHERVHCGPQPYMCVSMDCYARFGSVNELLNHKQTHDDLRYKCELNGCNIVFSDLGQLYHHEAQHFRDASYTCNYFGCKKFYYSKTEFQNHLAAHDIKVSNGEGKQTLNLQGLVSEEKSRYLPESRLLEQSEDSNLNDNFDPSGSQEIPQVKEESLSDSEDLNSESNCSLHCGKHRADAAASQGQASPRLLGTVAHNQSVPGFVMSQEGVFHPANMKQQCSNVAVCFDEKSLSCGFEGCCSTHKNSRSMQKHLRRAHPYNFKGRKNMEMKTKYFLDLLSDAQDSKSPTDMSPELGHNSDTNADSPESVYCAVDAKGSSDLREETCPSSPETSFYDSSKELDIEDNMLELMLGLKHLSLKNANIQNSSRQKSFLGYSSRDAKCPESVDETTSKFHLQEQEDNLPSQYLTQLAAKPFFCECHGCTCEFVTREALLMHYVKKHNYSKEVVLQLNMFQHRYSPFKCHICQRSFTRKTHLRIHYRNKHQIGCQMVAHKACPNEKFDHVGLCTEDMHKNSSAPVPACANSVGFSGHSDSEQLCHPKKEDCSSETDLESNEETDNDVTRKTSNITSLDSHREELEARQGRGSKRTVAKGNLCYILHKYHKPFHCIHKSCNSAFTNQKGLIRHYRTVHQYNKEQLCLEKDKARTKRELVKCKKIFACKHKECGKRFLCSKALARHCSDFHNEILEDQKLISEAESARFACNQAHCHAVFYTFNKLKRHLIEEHANEEKLNKDFEIHCDLNGCNRIFTNYSNYSQHVYFRHNEYYDSLFGNRKEDDDEDKNEQNCLKDSFSTSKQNGKQLKGKVKRISRSREKHSLNFKTKEEALQMCKEKSNQTQYPCMVQGCMSVVKLESSILRHYKRTHQMTNMYIEQRLQKLVLCVKCGIMTEKQSCSGTASGLDKKGVEMNEDKPADSEPVQESDKPLVPKPACDPPDESNEDQKQCSPSSVNCDASAFVYAGTLKYNHSSKNTCFEEPNTGETTVCKTEDLSESSERENSSSSSSLQLDLPREKEPEECQHSAVNQNAKRNVLCATKDKFQKPPVSKPFDLKTYKPMGFESSFLKFIQECEGKDDDDDDDDCDEVVEWESPEQLPVDETLQKEGDSQGNTPVNNFVSDENVIMTPNNPGQLTEIQPLLSESSSAPSLENLRAILDKALTDCGDLALKQLHYLRPVVVLERSKFSTPLIDLFPTKKADELCVGST
SIO_010081: RLF
subclass of: SO_0000673
so part of: RLF
location: complement(join(122024..126748,126917..127058,129228..129364,133593..133754))
location: region:122024-133754:-1
so has part: feature:133593-133754:-1:exon
so has part: feature:129228-129364:-1:exon
so has part: feature:126917-127058:-1:exon
so has part: feature:122024-126748:-1:exon

XP_030146176.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:133593-133754:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:129228-129364:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:126917-127058:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:122024-126748:-1:exon

GJA9
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: GJA9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 163074..181759
location: region:163074-181759:1
so has part: feature:163074-181759:1:exon
subclass of: SO_0000010

105758808
type: Gene
SIO_000068: ncbigene

position:163074:1
position: 163074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:181759:1
position: 181759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:163074-181759:1:exon

GJA9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: GJA9
product: gap junction protein alpha 9
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_032752650.2
SIO_010081: GJA9
subclass of: SO_0000673
so part of: GJA9
location: join(163074..163531,164018..164228,164910..165020,177932..181759)
location: region:163074-181759:1
so has part: feature:163074-163531:1:exon
so has part: feature:164018-164228:1:exon
so has part: feature:164910-165020:1:exon
so has part: feature:177932-181759:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:163074-163531:1:exon

position:163531:1
position: 163531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:164018-164228:1:exon

position:164018:1
position: 164018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:164228:1
position: 164228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:164910-165020:1:exon

position:164910:1
position: 164910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:165020:1
position: 165020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:177932-181759:1:exon

position:177932:1
position: 177932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115498248
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC115498248
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(169124..174842)
location: region:169124-174842:-1
so has part: feature:169124-174842:-1:exon
subclass of: SO_0000010

115498248
type: Gene
SIO_000068: ncbigene

position:169124:-1
position: 169124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:174842:-1
position: 174842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:169124-174842:-1:exon

LOC115498248
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC115498248
product: NF-kappa-B inhibitor delta
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_030290319.3
SIO_010081: LOC115498248
subclass of: SO_0000673
so part of: LOC115498248
location: complement(join(169124..169492,169805..169969,170309..170422,170816..170973,171444..171495,171668..171814,172508..172613,173404..173588,174063..174184,174382..174842))
location: region:169124-174842:-1
so has part: feature:174382-174842:-1:exon
so has part: feature:174063-174184:-1:exon
so has part: feature:173404-173588:-1:exon
so has part: feature:172508-172613:-1:exon
so has part: feature:171668-171814:-1:exon
so has part: feature:171444-171495:-1:exon
so has part: feature:170816-170973:-1:exon
so has part: feature:170309-170422:-1:exon
so has part: feature:169805-169969:-1:exon
so has part: feature:169124-169492:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:174382-174842:-1:exon

position:174382:-1
position: 174382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:174063-174184:-1:exon

position:174063:-1
position: 174063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:174184:-1
position: 174184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:173404-173588:-1:exon

position:173404:-1
position: 173404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:173588:-1
position: 173588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:172508-172613:-1:exon

position:172508:-1
position: 172508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:172613:-1
position: 172613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:171668-171814:-1:exon

position:171668:-1
position: 171668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:171814:-1
position: 171814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:171444-171495:-1:exon

position:171444:-1
position: 171444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:171495:-1
position: 171495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:170816-170973:-1:exon

position:170816:-1
position: 170816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:170973:-1
position: 170973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:170309-170422:-1:exon

position:170309:-1
position: 170309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:170422:-1
position: 170422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:169805-169969:-1:exon

position:169805:-1
position: 169805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:169969:-1
position: 169969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:169124-169492:-1:exon

position:169492:-1
position: 169492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115498248
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC115498248
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NF-kappa-B inhibitor delta
translation: MRHGDLGDAWALSGVPGVFRAPRHSEDPRTPTCTPPGPPRAAPPQTVKQLLKELRQQKSREGVRSPVGDPLSQATPPAGTPPLSSLTPSLSPQVLALPSLPSPRPSDGAPWPLAPAVTPSLCAVPHGSPHGSPGGAHGGRASGARGFQAAAIPGPAWPHPAVPWGEFGAPLLRREIRDPYPEPQDLAAARAALGCRDPRELLQQDEEGDTLLHVLCAGGHWALARAAAEALRDLGGLEVREHLGKTPLLVAAAAAAPEIVRDLLVLGANPDAADHDGRTALHLAAAYGHPEILQAMISSGVPVNVEARNFEGQTPLHCAVLAHNASLQGGYSPTGGSGGGSPTPQDQFRCVELLLQMGADSSSQDTKSSLTALHLAVRGGNLALAHLLLRQPGMAPRLVNMKAHGNTPLHMAAALPGTPSQEPLVRLLLAWGADPSARNLEHDLPQSLVPPGAPGDQLRLLLRSHRGSHRPPPTAE
SIO_010081: LOC115498248
subclass of: SO_0000673
so part of: LOC115498248
location: complement(join(169433..169492,169805..169969,170309..170422,170816..170973,171444..171495,171668..171814,172508..172613,173404..173588,174063..174184,174382..174703))
location: region:169433-174703:-1
so has part: feature:174382-174703:-1:exon
so has part: feature:174063-174184:-1:exon
so has part: feature:173404-173588:-1:exon
so has part: feature:172508-172613:-1:exon
so has part: feature:171668-171814:-1:exon
so has part: feature:171444-171495:-1:exon
so has part: feature:170816-170973:-1:exon
so has part: feature:170309-170422:-1:exon
so has part: feature:169805-169969:-1:exon
so has part: feature:169433-169492:-1:exon

XP_030146179.1
type: Protein
SIO_000068: ncbiprotein

position:169433:-1
position: 169433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:174703:-1
position: 174703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:174382-174703:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:174063-174184:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:173404-173588:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:172508-172613:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:171668-171814:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:171444-171495:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:170816-170973:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:170309-170422:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:169805-169969:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:169433-169492:-1:exon

GJA9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: GJA9
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: gap junction alpha-9 protein
translation: MGDWNFLGGILEEVHIHSTIIGKIWLTILFIFRMLVLGVATEDVWNDEQSEFICNTEQPGCRNVCYDEAFPISLIRYWVLQVIFVSSPSLVYMGHALYRLRALEKERQKKKAQVRVELESTELEMTENRKRLERELRQLDQRKLNKAPLRGSLLCTYVIHIFTRSAVEVGFMIGQYLLYGFHLDPLYKCQRDPCPNTVDCFVSRPRKDSVYIIYAINSNCIIAFKYSRNYPLRIP
SIO_010081: GJA9
subclass of: SO_0000673
so part of: GJA9
location: 180914..181623
location: region:180914-181623:1
so has part: feature:180914-181623:1:exon

XP_032608541.1
type: Protein
SIO_000068: ncbiprotein

position:180914:1
position: 180914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:181623:1
position: 181623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:180914-181623:1:exon

LOC115498249
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC115498249
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(182825..192064)
location: region:182825-192064:-1
so has part: feature:182825-192064:-1:exon
subclass of: SO_0000011

115498249
type: Gene
SIO_000068: ncbigene

position:182825:-1
position: 182825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:192064:-1
position: 192064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:182825-192064:-1:exon

LOC115498249
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC115498249
product: uncharacterized LOC115498249
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 95 samples with support for all annotated introns
transcript id: XR_003963659.3
SIO_010081: LOC115498249
subclass of: SO_0000673
so part of: LOC115498249
location: complement(join(182825..185958,191339..191359,191910..192064))
location: region:182825-192064:-1
so has part: feature:191910-192064:-1:exon
so has part: feature:191339-191359:-1:exon
so has part: feature:182825-185958:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:191910-192064:-1:exon

position:191910:-1
position: 191910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:191339-191359:-1:exon

position:191339:-1
position: 191339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:191359:-1
position: 191359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:182825-185958:-1:exon

position:185958:-1
position: 185958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101233756
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC101233756
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 185030..190293
location: region:185030-190293:1
so has part: feature:185030-190293:1:exon
subclass of: SO_0000010

101233756
type: Gene
SIO_000068: ncbigene

position:185030:1
position: 185030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:190293:1
position: 190293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:185030-190293:1:exon

LOC101233756
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC101233756
product: MYC binding protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 1 long SRA read, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 114 samples with support for all annotated introns
transcript id: XM_030290322.3
SIO_010081: LOC101233756
subclass of: SO_0000673
so part of: LOC101233756
location: join(185030..185165,185365..185437,187101..187149,187850..187979,190198..190293)
location: region:185030-190293:1
so has part: feature:185030-185165:1:exon
so has part: feature:185365-185437:1:exon
so has part: feature:187101-187149:1:exon
so has part: feature:187850-187979:1:exon
so has part: feature:190198-190293:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:185030-185165:1:exon

position:185165:1
position: 185165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:185365-185437:1:exon

position:185365:1
position: 185365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:185437:1
position: 185437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:187101-187149:1:exon

position:187101:1
position: 187101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:187149:1
position: 187149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:187850-187979:1:exon

position:187850:1
position: 187850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:187979:1
position: 187979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:190198-190293:1:exon

position:190198:1
position: 190198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101233756
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC101233756
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C-Myc-binding protein
translation: MAHHKAADSKREQFRQYLEKSGVLDMLTKVLVALYEEPEKPDSALDFLKHHLGASAPENPEIEALRLEVAEMKEKYEAVLEENKKLKTKLAQYEPPQDEKHGE
SIO_010081: LOC101233756
subclass of: SO_0000673
so part of: LOC101233756
location: join(185151..185165,185365..185437,187101..187149,187850..187979,190198..190242)
location: region:185151-190242:1
so has part: feature:185151-185165:1:exon
so has part: feature:185365-185437:1:exon
so has part: feature:187101-187149:1:exon
so has part: feature:187850-187979:1:exon
so has part: feature:190198-190242:1:exon

XP_030146182.1
type: Protein
SIO_000068: ncbiprotein

position:185151:1
position: 185151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:190242:1
position: 190242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:185151-185165:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:185365-185437:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:187101-187149:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:187850-187979:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:190198-190242:1:exon

RRAGC
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: RRAGC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 192374..206293
location: region:192374-206293:1
so has part: feature:192374-206293:1:exon
subclass of: SO_0000010

100224722
type: Gene
SIO_000068: ncbigene

position:192374:1
position: 192374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:206293:1
position: 206293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:192374-206293:1:exon

RRAGC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: RRAGC
product: Ras related GTP binding C
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 16 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 124 samples with support for all annotated introns
transcript id: XM_002197954.6
SIO_010081: RRAGC
subclass of: SO_0000673
so part of: RRAGC
location: join(192374..192672,196104..196307,196985..197184,198049..198163,199589..199731,200922..201070,201593..206293)
location: region:192374-206293:1
so has part: feature:192374-192672:1:exon
so has part: feature:196104-196307:1:exon
so has part: feature:196985-197184:1:exon
so has part: feature:198049-198163:1:exon
so has part: feature:199589-199731:1:exon
so has part: feature:200922-201070:1:exon
so has part: feature:201593-206293:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:192374-192672:1:exon

position:192672:1
position: 192672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:196104-196307:1:exon

position:196104:1
position: 196104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:196307:1
position: 196307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:196985-197184:1:exon

position:196985:1
position: 196985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:197184:1
position: 197184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:198049-198163:1:exon

position:198049:1
position: 198049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:198163:1
position: 198163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:199589-199731:1:exon

position:199589:1
position: 199589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:199731:1
position: 199731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:200922-201070:1:exon

position:200922:1
position: 200922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:201070:1
position: 201070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:201593-206293:1:exon

position:201593:1
position: 201593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RRAGC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: RRAGC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related GTP-binding protein C
translation: MALQFGGAGAPGTAEEPALVGGSFGAADSFPKDFGYGEEEEEAELEGGPGPGGPGGGAGGPGGGAGGADSKPRILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNKIYKDDISNSSFVNFQIWDFPGQMDFFDPTFDYEMIFRGTGALIYVIDAQDDYMEALTRLHITVSKAYKVNPEMNFEVFIHKVDGLSDDHKIETQRDIHQRANDDLTDAGLEKLHLSFYLTSIYDHSIFEAFSKVVQKLIPQLPTLENLLNIFISNSGIEKAFLFDVVSKIYIATDSSPVDMQSYELCCDMIDVVIDVSCIYGLKEDGTGSAYDKESMAIIKLNNTTVLYLKEVTKFLALVCILREESFERKGLIDYNFHCFRKAIHEVFEVGVASHRICNHQSSTSNMKAVTHNGTPRNAV
SIO_010081: RRAGC
subclass of: SO_0000673
so part of: RRAGC
location: join(192406..192672,196104..196307,196985..197184,198049..198163,199589..199731,200922..201070,201593..201744)
location: region:192406-201744:1
so has part: feature:192406-192672:1:exon
so has part: feature:196104-196307:1:exon
so has part: feature:196985-197184:1:exon
so has part: feature:198049-198163:1:exon
so has part: feature:199589-199731:1:exon
so has part: feature:200922-201070:1:exon
so has part: feature:201593-201744:1:exon

XP_002197990.1
type: Protein
SIO_000068: ncbiprotein

position:192406:1
position: 192406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:201744:1
position: 201744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:192406-192672:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:196104-196307:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:196985-197184:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:198049-198163:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:199589-199731:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:200922-201070:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:201593-201744:1:exon

LOC121471050
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121471050
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 219516..227784
location: region:219516-227784:1
so has part: feature:219516-227784:1:exon
subclass of: SO_0000011

121471050
type: Gene
SIO_000068: ncbigene

position:219516:1
position: 219516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:227784:1
position: 227784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:219516-227784:1:exon

LOC121471050
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC121471050
product: uncharacterized LOC121471050
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XR_005982444.1
SIO_010081: LOC121471050
subclass of: SO_0000673
so part of: LOC121471050
location: join(219516..219703,224907..227784)
location: region:219516-227784:1
so has part: feature:219516-219703:1:exon
so has part: feature:224907-227784:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:219516-219703:1:exon

position:219703:1
position: 219703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:224907-227784:1:exon

position:224907:1
position: 224907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121471051
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121471051
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(300760..304125)
location: region:300760-304125:-1
so has part: feature:300760-304125:-1:exon
subclass of: SO_0000011

121471051
type: Gene
SIO_000068: ncbigene

position:300760:-1
position: 300760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:304125:-1
position: 304125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:300760-304125:-1:exon

LOC121471051
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC121471051
product: uncharacterized LOC121471051
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_005982446.1
SIO_010081: LOC121471051
subclass of: SO_0000673
so part of: LOC121471051
location: complement(join(300760..301166,303627..304125))
location: region:300760-304125:-1
so has part: feature:303627-304125:-1:exon
so has part: feature:300760-301166:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:303627-304125:-1:exon

position:303627:-1
position: 303627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:300760-301166:-1:exon

position:301166:-1
position: 301166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115498265
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC115498265
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 341431..347648
location: region:341431-347648:1
so has part: feature:341431-347648:1:exon
subclass of: SO_0000011

115498265
type: Gene
SIO_000068: ncbigene

position:341431:1
position: 341431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:347648:1
position: 347648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:341431-347648:1:exon

LOC115498265
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC115498265
product: uncharacterized LOC115498265, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_005982442.1
SIO_010081: LOC115498265
subclass of: SO_0000673
so part of: LOC115498265
location: join(341431..344272,344374..344531,346635..347648)
location: region:341431-347648:1
so has part: feature:341431-344272:1:exon
so has part: feature:344374-344531:1:exon
so has part: feature:346635-347648:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:341431-344272:1:exon

position:344272:1
position: 344272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:344374-344531:1:exon

position:344374:1
position: 344374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:344531:1
position: 344531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:346635-347648:1:exon

position:346635:1
position: 346635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115498265
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC115498265
product: uncharacterized LOC115498265, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005982443.1
SIO_010081: LOC115498265
subclass of: SO_0000673
so part of: LOC115498265
location: join(341431..342967,343060..344272,344374..344531,346635..347648)
location: region:341431-347648:1
so has part: feature:341431-342967:1:exon
so has part: feature:343060-344272:1:exon
so has part: feature:344374-344531:1:exon
so has part: feature:346635-347648:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:341431-342967:1:exon

position:342967:1
position: 342967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:343060-344272:1:exon

position:343060:1
position: 343060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:344374-344531:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:346635-347648:1:exon

POU3F1
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: POU3F1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 365286..368077
location: region:365286-368077:1
so has part: feature:365286-368077:1:exon
subclass of: SO_0000010

115498247
type: Gene
SIO_000068: ncbigene

position:365286:1
position: 365286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:368077:1
position: 368077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:365286-368077:1:exon

POU3F1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: POU3F1
product: POU class 3 homeobox 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030290307.3
SIO_010081: POU3F1
subclass of: SO_0000673
so part of: POU3F1
location: 365286..368077
location: region:365286-368077:1
so has part: feature:365286-368077:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:365286-368077:1:exon

POU3F1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: POU3F1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: POU domain, class 3, transcription factor 1
translation: MAAAAQYLPRSAALMHPDGDRLHQGTTYREVQKMMHHEYLQGLAPAAGHAVGLAHHQWLPSAGTDWGSGGGGGGAHLPPAEHAKGGPPGPREELSAAAFHHRPHLVHQPAAGGAAGGWAQGGAHHLPPMSPPSGQPLLYAQPYAGLNGMLGPPAPALHHGLRDPLGAEEAGGHELAASPPPLGPPEPSDEDAPSSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEETDSSTGSPTNLDKIAAQGRKRKKRTSIEVGVKGALENHFLKCPKPSAHEITSLADSLQLEKEVVRVWFCNRRQKEKRMTPAGVPHPPMEDVYAQADTSPLHHALPGAVQ
SIO_010081: POU3F1
subclass of: SO_0000673
so part of: POU3F1
location: 365294..366409
location: region:365294-366409:1
so has part: feature:365294-366409:1:exon

XP_030146167.1
type: Protein
SIO_000068: ncbiprotein

position:365294:1
position: 365294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:366409:1
position: 366409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:365294-366409:1:exon

UTP11
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: UTP11
note: UTP11 small subunit processome component; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: complement(392515..398260)
location: region:392515-398260:-1
so has part: feature:392515-398260:-1:exon
subclass of: SO_0000010

100190686
type: Gene
SIO_000068: ncbigene

position:392515:-1
position: 392515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:398260:-1
position: 398260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:392515-398260:-1:exon

UTP11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: UTP11
product: UTP11 small subunit processome component
inference: similar to RNA sequence, mRNA (same species):RefSeq:NM_001245739.1
exception: annotated by transcript or proteomic data
note: The RefSeq transcript has 8 substitutions, 2 non-frameshifting indels compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001245739.1
SIO_010081: UTP11
subclass of: SO_0000673
so part of: UTP11
location: complement(join(392515..392772,393313..393423,394736..394866,395069..395162,396715..396828,397072..397174,397829..397890,398156..398260))
location: region:392515-398260:-1
so has part: feature:398156-398260:-1:exon
so has part: feature:397829-397890:-1:exon
so has part: feature:397072-397174:-1:exon
so has part: feature:396715-396828:-1:exon
so has part: feature:395069-395162:-1:exon
so has part: feature:394736-394866:-1:exon
so has part: feature:393313-393423:-1:exon
so has part: feature:392515-392772:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:398156-398260:-1:exon

position:398156:-1
position: 398156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:397829-397890:-1:exon

position:397829:-1
position: 397829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:397890:-1
position: 397890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:397072-397174:-1:exon

position:397072:-1
position: 397072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:397174:-1
position: 397174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:396715-396828:-1:exon

position:396715:-1
position: 396715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:396828:-1
position: 396828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:395069-395162:-1:exon

position:395069:-1
position: 395069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:395162:-1
position: 395162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:394736-394866:-1:exon

position:394736:-1
position: 394736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:394866:-1
position: 394866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:393313-393423:-1:exon

position:393313:-1
position: 393313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:393423:-1
position: 393423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:392515-392772:-1:exon

position:392772:-1
position: 392772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

UTP11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: UTP11
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: probable U3 small nucleolar RNA-associated protein 11
translation: MSAAFRKAAKARQRPHRERAQPAARTKLGLLEKKKDYRLRAHDYHKKQNALRELQKKALDKNPDEFYFKMIRAEVKDGVHVVKQPKDEITPEQVKLMRTQDIKYVEMKRVAEAKKIERLKAELHLLDAAGSSARRHLFFVDTEREAKEFDIAAHLDTLPELVDRVYNRPTIATLQREAVKGPTDPVHLKKLAQQRKNQYDLLRQRIEREKAMFVISQKIQTRKDLLDKTHKVKVKKETTTGPAIYKFKFQRKR
SIO_010081: UTP11
subclass of: SO_0000673
so part of: UTP11
location: complement(join(392689..392772,393313..393423,394736..394866,395069..395162,396715..396828,397072..397174,397829..397890,398156..398218))
location: region:392689-398218:-1
so has part: feature:398156-398218:-1:exon
so has part: feature:397829-397890:-1:exon
so has part: feature:397072-397174:-1:exon
so has part: feature:396715-396828:-1:exon
so has part: feature:395069-395162:-1:exon
so has part: feature:394736-394866:-1:exon
so has part: feature:393313-393423:-1:exon
so has part: feature:392689-392772:-1:exon

NP_001232668.1
type: Protein
SIO_000068: ncbiprotein

position:392689:-1
position: 392689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:398218:-1
position: 398218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:398156-398218:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:397829-397890:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:397072-397174:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:396715-396828:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:395069-395162:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:394736-394866:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:393313-393423:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:392689-392772:-1:exon

FHL3
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: FHL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 398628..422791
location: region:398628-422791:1
so has part: feature:398628-422791:1:exon
subclass of: SO_0000010

100221802
type: Gene
SIO_000068: ncbigene

position:398628:1
position: 398628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:422791:1
position: 422791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:398628-422791:1:exon

FHL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: FHL3
product: four and a half LIM domains 3, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 4 long SRA reads, 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 77 samples with support for all annotated introns
transcript id: XM_030290313.3
SIO_010081: FHL3
subclass of: SO_0000673
so part of: FHL3
location: join(398628..398728,418159..418343,418681..418855,419477..419646,419807..419993,420912..422791)
location: region:398628-422791:1
so has part: feature:398628-398728:1:exon
so has part: feature:418159-418343:1:exon
so has part: feature:418681-418855:1:exon
so has part: feature:419477-419646:1:exon
so has part: feature:419807-419993:1:exon
so has part: feature:420912-422791:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:398628-398728:1:exon

position:398728:1
position: 398728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:418159-418343:1:exon

position:418159:1
position: 418159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:418343:1
position: 418343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:418681-418855:1:exon

position:418681:1
position: 418681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:418855:1
position: 418855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:419477-419646:1:exon

position:419477:1
position: 419477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:419646:1
position: 419646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:419807-419993:1:exon

position:419807:1
position: 419807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:419993:1
position: 419993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:420912-422791:1:exon

position:420912:1
position: 420912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FHL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: FHL3
product: four and a half LIM domains 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 5 long SRA reads, 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 90 samples with support for all annotated introns
transcript id: XM_030290310.3
SIO_010081: FHL3
subclass of: SO_0000673
so part of: FHL3
location: join(398649..398728,418162..418343,418681..418855,419477..419646,419807..419993,420912..422791)
location: region:398649-422791:1
so has part: feature:398649-398728:1:exon
so has part: feature:418162-418343:1:exon
so has part: feature:418681-418855:1:exon
so has part: feature:419477-419646:1:exon
so has part: feature:419807-419993:1:exon
so has part: feature:420912-422791:1:exon

position:398649:1
position: 398649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:398649-398728:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:418162-418343:1:exon

position:418162:1
position: 418162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:418681-418855:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:419477-419646:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:419807-419993:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:420912-422791:1:exon

FHL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: FHL3
product: four and a half LIM domains 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 4 long SRA reads, 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_030290308.3
SIO_010081: FHL3
subclass of: SO_0000673
so part of: FHL3
location: join(409543..409700,418159..418343,418681..418855,419477..419646,419807..419993,420912..422791)
location: region:409543-422791:1
so has part: feature:409543-409700:1:exon
so has part: feature:418159-418343:1:exon
so has part: feature:418681-418855:1:exon
so has part: feature:419477-419646:1:exon
so has part: feature:419807-419993:1:exon
so has part: feature:420912-422791:1:exon

position:409543:1
position: 409543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:409543-409700:1:exon

position:409700:1
position: 409700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:418159-418343:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:418681-418855:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:419477-419646:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:419807-419993:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:420912-422791:1:exon

FHL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: FHL3
product: four and a half LIM domains 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 4 long SRA reads, 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_030290309.3
SIO_010081: FHL3
subclass of: SO_0000673
so part of: FHL3
location: join(409543..409700,418162..418343,418681..418855,419477..419646,419807..419993,420912..422791)
location: region:409543-422791:1
so has part: feature:409543-409700:1:exon
so has part: feature:418162-418343:1:exon
so has part: feature:418681-418855:1:exon
so has part: feature:419477-419646:1:exon
so has part: feature:419807-419993:1:exon
so has part: feature:420912-422791:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:409543-409700:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:418162-418343:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:418681-418855:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:419477-419646:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:419807-419993:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:420912-422791:1:exon

FHL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: FHL3
product: four and a half LIM domains 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 4 long SRA reads, 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_030290312.3
SIO_010081: FHL3
subclass of: SO_0000673
so part of: FHL3
location: join(409614..409632,418162..418343,418681..418855,419477..419646,419807..419993,420912..422791)
location: region:409614-422791:1
so has part: feature:409614-409632:1:exon
so has part: feature:418162-418343:1:exon
so has part: feature:418681-418855:1:exon
so has part: feature:419477-419646:1:exon
so has part: feature:419807-419993:1:exon
so has part: feature:420912-422791:1:exon

position:409614:1
position: 409614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:409614-409632:1:exon

position:409632:1
position: 409632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:418162-418343:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:418681-418855:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:419477-419646:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:419807-419993:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:420912-422791:1:exon

FHL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: FHL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: four and a half LIM domains protein 3 isoform X1
translation: MQAGEGGPQTGTMTECFDCDNCKESLYGRKYIQMDNGPYCIPCYDAHFANTCDECKELIGHDCRELYYEDRHYHEHCFRCFRCDRSLADEPFTCQGKELLCNDCYCSEFSSKCVACEKTVMPGSRKLEYNGQTWHEHCFICSSCQQPIGSRSFIPDKKDYYCVPCYESKFAPRCTRCKKTLTKGGVTYRDEPWHKECFVCTGCKTPLAGQQFTSQDDNPYCIKCFGNLYAKKCSACTKPITGFGGGKYVSFEDRHWHHNCFNCARCSTSLVGKGFIPDNDEILCRDCSSDL
SIO_010081: FHL3
subclass of: SO_0000673
so part of: FHL3
location: join(409694..409700,418159..418343,418681..418855,419477..419646,419807..419993,420912..421063)
location: region:409694-421063:1
so has part: feature:409694-409700:1:exon
so has part: feature:418159-418343:1:exon
so has part: feature:418681-418855:1:exon
so has part: feature:419477-419646:1:exon
so has part: feature:419807-419993:1:exon
so has part: feature:420912-421063:1:exon

XP_030146168.1
type: Protein
SIO_000068: ncbiprotein

position:409694:1
position: 409694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:421063:1
position: 421063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:409694-409700:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:418159-418343:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:418681-418855:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:419477-419646:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:419807-419993:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:420912-421063:1:exon

FHL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: FHL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: four and a half LIM domains protein 3 isoform X2
translation: MQGEGGPQTGTMTECFDCDNCKESLYGRKYIQMDNGPYCIPCYDAHFANTCDECKELIGHDCRELYYEDRHYHEHCFRCFRCDRSLADEPFTCQGKELLCNDCYCSEFSSKCVACEKTVMPGSRKLEYNGQTWHEHCFICSSCQQPIGSRSFIPDKKDYYCVPCYESKFAPRCTRCKKTLTKGGVTYRDEPWHKECFVCTGCKTPLAGQQFTSQDDNPYCIKCFGNLYAKKCSACTKPITGFGGGKYVSFEDRHWHHNCFNCARCSTSLVGKGFIPDNDEILCRDCSSDL
SIO_010081: FHL3
subclass of: SO_0000673
so part of: FHL3
location: join(409694..409700,418162..418343,418681..418855,419477..419646,419807..419993,420912..421063)
location: region:409694-421063:1
so has part: feature:409694-409700:1:exon
so has part: feature:418162-418343:1:exon
so has part: feature:418681-418855:1:exon
so has part: feature:419477-419646:1:exon
so has part: feature:419807-419993:1:exon
so has part: feature:420912-421063:1:exon

XP_030146169.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:409694-409700:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:418162-418343:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:418681-418855:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:419477-419646:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:419807-419993:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:420912-421063:1:exon

FHL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: FHL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: four and a half LIM domains protein 3 isoform X3
translation: MTECFDCDNCKESLYGRKYIQMDNGPYCIPCYDAHFANTCDECKELIGHDCRELYYEDRHYHEHCFRCFRCDRSLADEPFTCQGKELLCNDCYCSEFSSKCVACEKTVMPGSRKLEYNGQTWHEHCFICSSCQQPIGSRSFIPDKKDYYCVPCYESKFAPRCTRCKKTLTKGGVTYRDEPWHKECFVCTGCKTPLAGQQFTSQDDNPYCIKCFGNLYAKKCSACTKPITGFGGGKYVSFEDRHWHHNCFNCARCSTSLVGKGFIPDNDEILCRDCSSDL
SIO_010081: FHL3
subclass of: SO_0000673
so part of: FHL3
location: join(418188..418343,418681..418855,419477..419646,419807..419993,420912..421063)
location: region:418188-421063:1
so has part: feature:418188-418343:1:exon
so has part: feature:418681-418855:1:exon
so has part: feature:419477-419646:1:exon
so has part: feature:419807-419993:1:exon
so has part: feature:420912-421063:1:exon

XP_030146170.1
type: Protein
SIO_000068: ncbiprotein

position:418188:1
position: 418188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:418188-418343:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:418681-418855:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:419477-419646:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:419807-419993:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:420912-421063:1:exon

FHL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: FHL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: four and a half LIM domains protein 3 isoform X3
translation: MTECFDCDNCKESLYGRKYIQMDNGPYCIPCYDAHFANTCDECKELIGHDCRELYYEDRHYHEHCFRCFRCDRSLADEPFTCQGKELLCNDCYCSEFSSKCVACEKTVMPGSRKLEYNGQTWHEHCFICSSCQQPIGSRSFIPDKKDYYCVPCYESKFAPRCTRCKKTLTKGGVTYRDEPWHKECFVCTGCKTPLAGQQFTSQDDNPYCIKCFGNLYAKKCSACTKPITGFGGGKYVSFEDRHWHHNCFNCARCSTSLVGKGFIPDNDEILCRDCSSDL
SIO_010081: FHL3
subclass of: SO_0000673
so part of: FHL3
location: join(418188..418343,418681..418855,419477..419646,419807..419993,420912..421063)
location: region:418188-421063:1
so has part: feature:418188-418343:1:exon
so has part: feature:418681-418855:1:exon
so has part: feature:419477-419646:1:exon
so has part: feature:419807-419993:1:exon
so has part: feature:420912-421063:1:exon

XP_030146172.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:418188-418343:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:418681-418855:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:419477-419646:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:419807-419993:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:420912-421063:1:exon

FHL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: FHL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: four and a half LIM domains protein 3 isoform X3
translation: MTECFDCDNCKESLYGRKYIQMDNGPYCIPCYDAHFANTCDECKELIGHDCRELYYEDRHYHEHCFRCFRCDRSLADEPFTCQGKELLCNDCYCSEFSSKCVACEKTVMPGSRKLEYNGQTWHEHCFICSSCQQPIGSRSFIPDKKDYYCVPCYESKFAPRCTRCKKTLTKGGVTYRDEPWHKECFVCTGCKTPLAGQQFTSQDDNPYCIKCFGNLYAKKCSACTKPITGFGGGKYVSFEDRHWHHNCFNCARCSTSLVGKGFIPDNDEILCRDCSSDL
SIO_010081: FHL3
subclass of: SO_0000673
so part of: FHL3
location: join(418188..418343,418681..418855,419477..419646,419807..419993,420912..421063)
location: region:418188-421063:1
so has part: feature:418188-418343:1:exon
so has part: feature:418681-418855:1:exon
so has part: feature:419477-419646:1:exon
so has part: feature:419807-419993:1:exon
so has part: feature:420912-421063:1:exon

XP_030146173.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:418188-418343:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:418681-418855:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:419477-419646:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:419807-419993:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:420912-421063:1:exon

LOC115498278
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC115498278
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(423935..425110)
location: region:423935-425110:-1
so has part: feature:423935-425110:-1:exon
subclass of: SO_0000011

115498278
type: Gene
SIO_000068: ncbigene

position:423935:-1
position: 423935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:425110:-1
position: 425110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:423935-425110:-1:exon

LOC115498278
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC115498278
product: uncharacterized LOC115498278
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XR_004369717.2
SIO_010081: LOC115498278
subclass of: SO_0000673
so part of: LOC115498278
location: complement(join(423935..424254,424366..424445,424602..425110))
location: region:423935-425110:-1
so has part: feature:424602-425110:-1:exon
so has part: feature:424366-424445:-1:exon
so has part: feature:423935-424254:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:424602-425110:-1:exon

position:424602:-1
position: 424602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:424366-424445:-1:exon

position:424366:-1
position: 424366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:424445:-1
position: 424445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:423935-424254:-1:exon

position:424254:-1
position: 424254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SF3A3
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: SF3A3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 425226..431630
location: region:425226-431630:1
so has part: feature:425226-431630:1:exon
subclass of: SO_0000010

100226638
type: Gene
SIO_000068: ncbigene

position:425226:1
position: 425226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:431630:1
position: 431630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:425226-431630:1:exon

SF3A3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: SF3A3
product: splicing factor 3a subunit 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 8 ESTs, 4 long SRA reads, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 152 samples with support for all annotated introns
transcript id: XM_030290384.3
SIO_010081: SF3A3
subclass of: SO_0000673
so part of: SF3A3
location: join(425226..425401,425475..425522,425684..425736,426212..426317,426724..426796,427153..427244,427370..427452,427813..427951,428294..428362,428705..428772,429109..429216,429302..429371,429823..429987,430095..430205,430586..430676,430967..431022,431347..431630)
location: region:425226-431630:1
so has part: feature:425226-425401:1:exon
so has part: feature:425475-425522:1:exon
so has part: feature:425684-425736:1:exon
so has part: feature:426212-426317:1:exon
so has part: feature:426724-426796:1:exon
so has part: feature:427153-427244:1:exon
so has part: feature:427370-427452:1:exon
so has part: feature:427813-427951:1:exon
so has part: feature:428294-428362:1:exon
so has part: feature:428705-428772:1:exon
so has part: feature:429109-429216:1:exon
so has part: feature:429302-429371:1:exon
so has part: feature:429823-429987:1:exon
so has part: feature:430095-430205:1:exon
so has part: feature:430586-430676:1:exon
so has part: feature:430967-431022:1:exon
so has part: feature:431347-431630:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:425226-425401:1:exon

position:425401:1
position: 425401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:425475-425522:1:exon

position:425475:1
position: 425475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:425522:1
position: 425522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:425684-425736:1:exon

position:425684:1
position: 425684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:425736:1
position: 425736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:426212-426317:1:exon

position:426212:1
position: 426212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:426317:1
position: 426317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:426724-426796:1:exon

position:426724:1
position: 426724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:426796:1
position: 426796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:427153-427244:1:exon

position:427153:1
position: 427153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:427244:1
position: 427244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:427370-427452:1:exon

position:427370:1
position: 427370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:427452:1
position: 427452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:427813-427951:1:exon

position:427813:1
position: 427813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:427951:1
position: 427951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:428294-428362:1:exon

position:428294:1
position: 428294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:428362:1
position: 428362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:428705-428772:1:exon

position:428705:1
position: 428705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:428772:1
position: 428772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:429109-429216:1:exon

position:429109:1
position: 429109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:429216:1
position: 429216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:429302-429371:1:exon

position:429302:1
position: 429302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:429371:1
position: 429371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:429823-429987:1:exon

position:429823:1
position: 429823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:429987:1
position: 429987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:430095-430205:1:exon

position:430095:1
position: 430095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:430205:1
position: 430205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:430586-430676:1:exon

position:430586:1
position: 430586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:430676:1
position: 430676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:430967-431022:1:exon

position:430967:1
position: 430967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:431022:1
position: 431022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:431347-431630:1:exon

position:431347:1
position: 431347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SF3A3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: SF3A3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: splicing factor 3A subunit 3
translation: METILEQQRRYHEERERLMDVMVKEMLTKKSTLRDQINSDHRTRAMQDRYMEVSGNLRDLYDDKDGLRKEELSAISGPNEFAEFYNRLKQIKEFHRKHPNEICVPMSVEFEELLKAKDNPSEEAQNLVEFTDEEGYGRYLDLHDCYLKYINLKSSEKLDYITYLSTFDQLFDIPKERKNAEYKRYLEMLLEYLQDYTDRVKPLLDQNELFGKIQTEFEKKWENGTFPGWPKETSSALTHAGAHLDLSAFSSWEELASLGLDRLKSALLALGLKCGGTLEERAQRLFSTKGKSLEALDPSLFAKNPKTKGSKRDTERNKDLAFLEAQIYEYVEVLGEQRHLTHENVQRKQARTGEEREEEEEEQISESESEDEENEIIYNPKNLPLGWDGKPIPYWLYKLHGLNINYNCEICGNYTYRGPKAFQRHFAEWRHAHGMRCLGIPNTAHFANVTQIEDAVSLWAKLKQQKASERWQPDTEEEYEDSSGNVVNKKTYEDLKRQGLL
SIO_010081: SF3A3
subclass of: SO_0000673
so part of: SF3A3
location: join(425306..425401,425475..425522,425684..425736,426212..426317,426724..426796,427153..427244,427370..427452,427813..427951,428294..428362,428705..428772,429109..429216,429302..429371,429823..429987,430095..430205,430586..430676,430967..431022,431347..431424)
location: region:425306-431424:1
so has part: feature:425306-425401:1:exon
so has part: feature:425475-425522:1:exon
so has part: feature:425684-425736:1:exon
so has part: feature:426212-426317:1:exon
so has part: feature:426724-426796:1:exon
so has part: feature:427153-427244:1:exon
so has part: feature:427370-427452:1:exon
so has part: feature:427813-427951:1:exon
so has part: feature:428294-428362:1:exon
so has part: feature:428705-428772:1:exon
so has part: feature:429109-429216:1:exon
so has part: feature:429302-429371:1:exon
so has part: feature:429823-429987:1:exon
so has part: feature:430095-430205:1:exon
so has part: feature:430586-430676:1:exon
so has part: feature:430967-431022:1:exon
so has part: feature:431347-431424:1:exon

XP_030146244.1
type: Protein
SIO_000068: ncbiprotein

position:425306:1
position: 425306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:431424:1
position: 431424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:425306-425401:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:425475-425522:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:425684-425736:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:426212-426317:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:426724-426796:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:427153-427244:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:427370-427452:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:427813-427951:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:428294-428362:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:428705-428772:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:429109-429216:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:429302-429371:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:429823-429987:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:430095-430205:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:430586-430676:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:430967-431022:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:431347-431424:1:exon

LOC115498232
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC115498232
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 435092..438408
location: region:435092-438408:1
so has part: feature:435092-438408:1:exon
subclass of: SO_0000010

115498232
type: Gene
SIO_000068: ncbigene

position:435092:1
position: 435092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:438408:1
position: 438408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:435092-438408:1:exon

LOC115498232
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC115498232
product: mucin-5AC
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_041720714.1
SIO_010081: LOC115498232
subclass of: SO_0000673
so part of: LOC115498232
location: join(435092..435462,435699..435797,436029..436179,436380..436453,437029..437124,437216..438408)
location: region:435092-438408:1
so has part: feature:435092-435462:1:exon
so has part: feature:435699-435797:1:exon
so has part: feature:436029-436179:1:exon
so has part: feature:436380-436453:1:exon
so has part: feature:437029-437124:1:exon
so has part: feature:437216-438408:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:435092-435462:1:exon

position:435462:1
position: 435462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:435699-435797:1:exon

position:435699:1
position: 435699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:435797:1
position: 435797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:436029-436179:1:exon

position:436029:1
position: 436029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:436179:1
position: 436179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:436380-436453:1:exon

position:436380:1
position: 436380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:436453:1
position: 436453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:437029-437124:1:exon

position:437029:1
position: 437029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:437124:1
position: 437124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:437216-438408:1:exon

position:437216:1
position: 437216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115498232
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC115498232
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mucin-5AC
translation: MVVATTKNAAVVATASTSVASRNTLATTKNTSVVVKTTKNTTKNTSVVTVATKNTSPATKNTSPATKNAMVVVATTKEASRATKNTSVVVTNNATVLAVTNNASLVATNTSMEGAEETRQTCQSFQCSGERCYQDGAHANGTATCHNETHCELYRFSSTNYSAGCSSGCSAEPCSAKGSRQQQCALECCAGPLCLQLNATAYGDLPPTTTTAVLTTTATSPRPPPQNGKVCAAFSCHGDQCFKGRKTITRCILGQDFCEMKKMGLNYVSGCSKACKAAKPVCAGGMKAACYQECCPATPKGSCLKLDGKVHINSAGQVTLAPLLKVMACGVVLLLNYRVSTSLWG
SIO_010081: LOC115498232
subclass of: SO_0000673
so part of: LOC115498232
location: join(435106..435462,435699..435797,436029..436179,436380..436453,437029..437124,437216..437476)
location: region:435106-437476:1
so has part: feature:435106-435462:1:exon
so has part: feature:435699-435797:1:exon
so has part: feature:436029-436179:1:exon
so has part: feature:436380-436453:1:exon
so has part: feature:437029-437124:1:exon
so has part: feature:437216-437476:1:exon

XP_041576648.1
type: Protein
SIO_000068: ncbiprotein

position:435106:1
position: 435106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:437476:1
position: 437476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:435106-435462:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:435699-435797:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:436029-436179:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:436380-436453:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:437029-437124:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:437216-437476:1:exon

INPP5B
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: INPP5B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 439276..453728
location: region:439276-453728:1
so has part: feature:439276-453728:1:exon
subclass of: SO_0000010

100220826
type: Gene
SIO_000068: ncbigene

position:439276:1
position: 439276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:453728:1
position: 453728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:439276-453728:1:exon

INPP5B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: INPP5B
product: inositol polyphosphate-5-phosphatase B, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 8 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_030290216.3
SIO_010081: INPP5B
subclass of: SO_0000673
so part of: INPP5B
location: join(439276..439522,440287..440384,440736..440765,441211..441321,443878..443971,444857..445027,445687..445788,446168..446282,446881..446997,447319..447506,447984..448095,448242..448351,449183..449318,449813..449923,450556..450718,450870..451105,451296..451409,451729..451813,452144..452271,452557..452668,453533..453728)
location: region:439276-453728:1
so has part: feature:439276-439522:1:exon
so has part: feature:440287-440384:1:exon
so has part: feature:440736-440765:1:exon
so has part: feature:441211-441321:1:exon
so has part: feature:443878-443971:1:exon
so has part: feature:444857-445027:1:exon
so has part: feature:445687-445788:1:exon
so has part: feature:446168-446282:1:exon
so has part: feature:446881-446997:1:exon
so has part: feature:447319-447506:1:exon
so has part: feature:447984-448095:1:exon
so has part: feature:448242-448351:1:exon
so has part: feature:449183-449318:1:exon
so has part: feature:449813-449923:1:exon
so has part: feature:450556-450718:1:exon
so has part: feature:450870-451105:1:exon
so has part: feature:451296-451409:1:exon
so has part: feature:451729-451813:1:exon
so has part: feature:452144-452271:1:exon
so has part: feature:452557-452668:1:exon
so has part: feature:453533-453728:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:439276-439522:1:exon

position:439522:1
position: 439522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:440287-440384:1:exon

position:440287:1
position: 440287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:440384:1
position: 440384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:440736-440765:1:exon

position:440736:1
position: 440736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:440765:1
position: 440765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:441211-441321:1:exon

position:441211:1
position: 441211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:441321:1
position: 441321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:443878-443971:1:exon

position:443878:1
position: 443878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:443971:1
position: 443971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:444857-445027:1:exon

position:444857:1
position: 444857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:445027:1
position: 445027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:445687-445788:1:exon

position:445687:1
position: 445687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:445788:1
position: 445788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:446168-446282:1:exon

position:446168:1
position: 446168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:446282:1
position: 446282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:446881-446997:1:exon

position:446881:1
position: 446881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:446997:1
position: 446997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:447319-447506:1:exon

position:447319:1
position: 447319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:447506:1
position: 447506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:447984-448095:1:exon

position:447984:1
position: 447984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:448095:1
position: 448095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:448242-448351:1:exon

position:448242:1
position: 448242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:448351:1
position: 448351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:449183-449318:1:exon

position:449183:1
position: 449183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:449318:1
position: 449318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:449813-449923:1:exon

position:449813:1
position: 449813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:449923:1
position: 449923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:450556-450718:1:exon

position:450556:1
position: 450556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:450718:1
position: 450718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:450870-451105:1:exon

position:450870:1
position: 450870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:451105:1
position: 451105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:451296-451409:1:exon

position:451296:1
position: 451296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:451409:1
position: 451409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:451729-451813:1:exon

position:451729:1
position: 451729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:451813:1
position: 451813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:452144-452271:1:exon

position:452144:1
position: 452144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:452271:1
position: 452271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:452557-452668:1:exon

position:452557:1
position: 452557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:452668:1
position: 452668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:453533-453728:1:exon

position:453533:1
position: 453533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

INPP5B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: INPP5B
product: inositol polyphosphate-5-phosphatase B, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 8 ESTs, 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 80 samples with support for all annotated introns
transcript id: XM_030290215.3
SIO_010081: INPP5B
subclass of: SO_0000673
so part of: INPP5B
location: join(439276..439448,439807..439886,440287..440384,440736..440765,441211..441321,443878..443971,444857..445027,445687..445788,446168..446282,446881..446997,447319..447506,447984..448095,448242..448351,449183..449318,449813..449923,450556..450718,450870..451105,451296..451409,451729..451813,452144..452271,452557..452668,453533..453728)
location: region:439276-453728:1
so has part: feature:439276-439448:1:exon
so has part: feature:439807-439886:1:exon
so has part: feature:440287-440384:1:exon
so has part: feature:440736-440765:1:exon
so has part: feature:441211-441321:1:exon
so has part: feature:443878-443971:1:exon
so has part: feature:444857-445027:1:exon
so has part: feature:445687-445788:1:exon
so has part: feature:446168-446282:1:exon
so has part: feature:446881-446997:1:exon
so has part: feature:447319-447506:1:exon
so has part: feature:447984-448095:1:exon
so has part: feature:448242-448351:1:exon
so has part: feature:449183-449318:1:exon
so has part: feature:449813-449923:1:exon
so has part: feature:450556-450718:1:exon
so has part: feature:450870-451105:1:exon
so has part: feature:451296-451409:1:exon
so has part: feature:451729-451813:1:exon
so has part: feature:452144-452271:1:exon
so has part: feature:452557-452668:1:exon
so has part: feature:453533-453728:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:439276-439448:1:exon

position:439448:1
position: 439448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:439807-439886:1:exon

position:439807:1
position: 439807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:439886:1
position: 439886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:440287-440384:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:440736-440765:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:441211-441321:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:443878-443971:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:444857-445027:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:445687-445788:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:446168-446282:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:446881-446997:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:447319-447506:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:447984-448095:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:448242-448351:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:449183-449318:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:449813-449923:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:450556-450718:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:450870-451105:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:451296-451409:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:451729-451813:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:452144-452271:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:452557-452668:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:453533-453728:1:exon

INPP5B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: INPP5B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: type II inositol 1,4,5-trisphosphate 5-phosphatase isoform X4
translation: MDQSVAIQESLAAGATCRIVSFDGPRGRGAAALPAPRWPRRSLRIYVYTHRRMAITAEDVWLERIIPITDGFAVEEVVLDSDLHVIGSDVTVRITSADGGLTVQLPFGSQTRTFLQELSRCSAEAVGSEGVKQNGKKAAVSQSSSHDSTDRGTPRQSKLKSEVRTEQVRASRVMASNKASMLSEPKFGLRDTIVKSQLVQKEDSYTHIQNYRVFVGTYNVNGQSPTESLQPWLRCDAEPPDIYCVGFQELDLTKEAFFFNDTPKEEEWFKAVTDSLHPDAKYAKVKLVRLVGIMLLLYVKAELALNISEVEVETVGTGIMGRMGNKGAVAIRFKFHNTSVCIVNSHLAAHTEEYERRNQDFKDICSRMQFCQSDPNLPPLTIGKHDVILWLGDLNYRLEELDVAKVKQLVEEKAFLELCQYDQLKRQMKANAAFEGFTEGEISFQPTYKYDAGSDDWDTSEKCRVPAWCDRILWKGQRVAQLSYRSHMALKLSDHKPVSSVFDVGVKVVNEELYRKAFEEIVRSLDKLENANIPSVTLSRREIHFEDVKYMQLQVERITIRNGQVPCQFQFISKPDEETYCKEWLTANPSKGFLLSDAEITVELEVFVNKSTATRLNSGEEKLEDILVLHLVNGKDYFLSITGNYLPSCFGSPIHTLCYMREPIQDMSAESIRRLTLMPVDMSDDPAQDEKPMDIPKELWMMVDHLNRNASQQEDLFQQPGLRSEFEQIRDCLDKGMYDTFLGSNHSVAEALLLFLESLPEPVICCRFYSSCLESASNYGLSCQIISDLPACHKNVFEYLMAFLRELLKNSGKNHLDVNILASVFGGLLLRPPPGHAAPDVAAKRKAQQFIRQFLLREDHLP
SIO_010081: INPP5B
subclass of: SO_0000673
so part of: INPP5B
location: join(439392..439522,440287..440384,440736..440765,441211..441321,443878..443971,444857..445027,445687..445788,446168..446282,446881..446997,447319..447506,447984..448095,448242..448351,449183..449318,449813..449923,450556..450718,450870..451105,451296..451409,451729..451813,452144..452271,452557..452668,453533..453657)
location: region:439392-453657:1
so has part: feature:439392-439522:1:exon
so has part: feature:440287-440384:1:exon
so has part: feature:440736-440765:1:exon
so has part: feature:441211-441321:1:exon
so has part: feature:443878-443971:1:exon
so has part: feature:444857-445027:1:exon
so has part: feature:445687-445788:1:exon
so has part: feature:446168-446282:1:exon
so has part: feature:446881-446997:1:exon
so has part: feature:447319-447506:1:exon
so has part: feature:447984-448095:1:exon
so has part: feature:448242-448351:1:exon
so has part: feature:449183-449318:1:exon
so has part: feature:449813-449923:1:exon
so has part: feature:450556-450718:1:exon
so has part: feature:450870-451105:1:exon
so has part: feature:451296-451409:1:exon
so has part: feature:451729-451813:1:exon
so has part: feature:452144-452271:1:exon
so has part: feature:452557-452668:1:exon
so has part: feature:453533-453657:1:exon

XP_030146076.3
type: Protein
SIO_000068: ncbiprotein

position:439392:1
position: 439392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:453657:1
position: 453657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:439392-439522:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:440287-440384:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:440736-440765:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:441211-441321:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:443878-443971:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:444857-445027:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:445687-445788:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:446168-446282:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:446881-446997:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:447319-447506:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:447984-448095:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:448242-448351:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:449183-449318:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:449813-449923:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:450556-450718:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:450870-451105:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:451296-451409:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:451729-451813:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:452144-452271:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:452557-452668:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:453533-453657:1:exon

INPP5B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: INPP5B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: type II inositol 1,4,5-trisphosphate 5-phosphatase isoform X3
translation: MDQSVAIQESLAAGATCRIAVQGLLPAGHSVESRLLGLVERRGQHAIYVYTHRRMAITAEDVWLERIIPITDGFAVEEVVLDSDLHVIGSDVTVRITSADGGLTVQLPFGSQTRTFLQELSRCSAEAVGSEGVKQNGKKAAVSQSSSHDSTDRGTPRQSKLKSEVRTEQVRASRVMASNKASMLSEPKFGLRDTIVKSQLVQKEDSYTHIQNYRVFVGTYNVNGQSPTESLQPWLRCDAEPPDIYCVGFQELDLTKEAFFFNDTPKEEEWFKAVTDSLHPDAKYAKVKLVRLVGIMLLLYVKAELALNISEVEVETVGTGIMGRMGNKGAVAIRFKFHNTSVCIVNSHLAAHTEEYERRNQDFKDICSRMQFCQSDPNLPPLTIGKHDVILWLGDLNYRLEELDVAKVKQLVEEKAFLELCQYDQLKRQMKANAAFEGFTEGEISFQPTYKYDAGSDDWDTSEKCRVPAWCDRILWKGQRVAQLSYRSHMALKLSDHKPVSSVFDVGVKVVNEELYRKAFEEIVRSLDKLENANIPSVTLSRREIHFEDVKYMQLQVERITIRNGQVPCQFQFISKPDEETYCKEWLTANPSKGFLLSDAEITVELEVFVNKSTATRLNSGEEKLEDILVLHLVNGKDYFLSITGNYLPSCFGSPIHTLCYMREPIQDMSAESIRRLTLMPVDMSDDPAQDEKPMDIPKELWMMVDHLNRNASQQEDLFQQPGLRSEFEQIRDCLDKGMYDTFLGSNHSVAEALLLFLESLPEPVICCRFYSSCLESASNYGLSCQIISDLPACHKNVFEYLMAFLRELLKNSGKNHLDVNILASVFGGLLLRPPPGHAAPDVAAKRKAQQFIRQFLLREDHLP
SIO_010081: INPP5B
subclass of: SO_0000673
so part of: INPP5B
location: join(439392..439448,439807..439886,440287..440384,440736..440765,441211..441321,443878..443971,444857..445027,445687..445788,446168..446282,446881..446997,447319..447506,447984..448095,448242..448351,449183..449318,449813..449923,450556..450718,450870..451105,451296..451409,451729..451813,452144..452271,452557..452668,453533..453657)
location: region:439392-453657:1
so has part: feature:439392-439448:1:exon
so has part: feature:439807-439886:1:exon
so has part: feature:440287-440384:1:exon
so has part: feature:440736-440765:1:exon
so has part: feature:441211-441321:1:exon
so has part: feature:443878-443971:1:exon
so has part: feature:444857-445027:1:exon
so has part: feature:445687-445788:1:exon
so has part: feature:446168-446282:1:exon
so has part: feature:446881-446997:1:exon
so has part: feature:447319-447506:1:exon
so has part: feature:447984-448095:1:exon
so has part: feature:448242-448351:1:exon
so has part: feature:449183-449318:1:exon
so has part: feature:449813-449923:1:exon
so has part: feature:450556-450718:1:exon
so has part: feature:450870-451105:1:exon
so has part: feature:451296-451409:1:exon
so has part: feature:451729-451813:1:exon
so has part: feature:452144-452271:1:exon
so has part: feature:452557-452668:1:exon
so has part: feature:453533-453657:1:exon

XP_030146075.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:439392-439448:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:439807-439886:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:440287-440384:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:440736-440765:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:441211-441321:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:443878-443971:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:444857-445027:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:445687-445788:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:446168-446282:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:446881-446997:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:447319-447506:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:447984-448095:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:448242-448351:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:449183-449318:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:449813-449923:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:450556-450718:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:450870-451105:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:451296-451409:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:451729-451813:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:452144-452271:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:452557-452668:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:453533-453657:1:exon

INPP5B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: INPP5B
product: inositol polyphosphate-5-phosphatase B, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 8 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 84 samples with support for all annotated introns
transcript id: XM_030290218.3
SIO_010081: INPP5B
subclass of: SO_0000673
so part of: INPP5B
location: join(439693..439890,440287..440384,440736..440765,441211..441321,443878..443971,444857..445027,445687..445788,446168..446282,446881..446997,447319..447506,447984..448095,448242..448351,449183..449318,449813..449923,450556..450718,450870..451105,451296..451409,451729..451813,452144..452271,452557..452668,453533..453728)
location: region:439693-453728:1
so has part: feature:439693-439890:1:exon
so has part: feature:440287-440384:1:exon
so has part: feature:440736-440765:1:exon
so has part: feature:441211-441321:1:exon
so has part: feature:443878-443971:1:exon
so has part: feature:444857-445027:1:exon
so has part: feature:445687-445788:1:exon
so has part: feature:446168-446282:1:exon
so has part: feature:446881-446997:1:exon
so has part: feature:447319-447506:1:exon
so has part: feature:447984-448095:1:exon
so has part: feature:448242-448351:1:exon
so has part: feature:449183-449318:1:exon
so has part: feature:449813-449923:1:exon
so has part: feature:450556-450718:1:exon
so has part: feature:450870-451105:1:exon
so has part: feature:451296-451409:1:exon
so has part: feature:451729-451813:1:exon
so has part: feature:452144-452271:1:exon
so has part: feature:452557-452668:1:exon
so has part: feature:453533-453728:1:exon

position:439693:1
position: 439693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:439693-439890:1:exon

position:439890:1
position: 439890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:440287-440384:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:440736-440765:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:441211-441321:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:443878-443971:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:444857-445027:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:445687-445788:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:446168-446282:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:446881-446997:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:447319-447506:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:447984-448095:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:448242-448351:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:449183-449318:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:449813-449923:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:450556-450718:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:450870-451105:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:451296-451409:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:451729-451813:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:452144-452271:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:452557-452668:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:453533-453728:1:exon

INPP5B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: INPP5B
product: inositol polyphosphate-5-phosphatase B, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 8 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 85 samples with support for all annotated introns
transcript id: XM_041720711.1
SIO_010081: INPP5B
subclass of: SO_0000673
so part of: INPP5B
location: join(439922..440384,440736..440765,441211..441321,443878..443971,444857..445027,445687..445788,446168..446282,446881..446997,447319..447506,447984..448095,448242..448351,449183..449318,449813..449923,450556..450718,450870..451105,451296..451409,451729..451813,452144..452271,452557..452668,453533..453728)
location: region:439922-453728:1
so has part: feature:439922-440384:1:exon
so has part: feature:440736-440765:1:exon
so has part: feature:441211-441321:1:exon
so has part: feature:443878-443971:1:exon
so has part: feature:444857-445027:1:exon
so has part: feature:445687-445788:1:exon
so has part: feature:446168-446282:1:exon
so has part: feature:446881-446997:1:exon
so has part: feature:447319-447506:1:exon
so has part: feature:447984-448095:1:exon
so has part: feature:448242-448351:1:exon
so has part: feature:449183-449318:1:exon
so has part: feature:449813-449923:1:exon
so has part: feature:450556-450718:1:exon
so has part: feature:450870-451105:1:exon
so has part: feature:451296-451409:1:exon
so has part: feature:451729-451813:1:exon
so has part: feature:452144-452271:1:exon
so has part: feature:452557-452668:1:exon
so has part: feature:453533-453728:1:exon

position:439922:1
position: 439922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:439922-440384:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:440736-440765:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:441211-441321:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:443878-443971:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:444857-445027:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:445687-445788:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:446168-446282:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:446881-446997:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:447319-447506:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:447984-448095:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:448242-448351:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:449183-449318:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:449813-449923:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:450556-450718:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:450870-451105:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:451296-451409:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:451729-451813:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:452144-452271:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:452557-452668:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:453533-453728:1:exon

INPP5B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: INPP5B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: type II inositol 1,4,5-trisphosphate 5-phosphatase isoform X1
translation: MGEQVGGHLVEELLWDLHEVVLAGAGRCCWVGWGPCWSVCRCARTEEALPPCLLCACRIYVYTHRRMAITAEDVWLERIIPITDGFAVEEVVLDSDLHVIGSDVTVRITSADGGLTVQLPFGSQTRTFLQELSRCSAEAVGSEGVKQNGKKAAVSQSSSHDSTDRGTPRQSKLKSEVRTEQVRASRVMASNKASMLSEPKFGLRDTIVKSQLVQKEDSYTHIQNYRVFVGTYNVNGQSPTESLQPWLRCDAEPPDIYCVGFQELDLTKEAFFFNDTPKEEEWFKAVTDSLHPDAKYAKVKLVRLVGIMLLLYVKAELALNISEVEVETVGTGIMGRMGNKGAVAIRFKFHNTSVCIVNSHLAAHTEEYERRNQDFKDICSRMQFCQSDPNLPPLTIGKHDVILWLGDLNYRLEELDVAKVKQLVEEKAFLELCQYDQLKRQMKANAAFEGFTEGEISFQPTYKYDAGSDDWDTSEKCRVPAWCDRILWKGQRVAQLSYRSHMALKLSDHKPVSSVFDVGVKVVNEELYRKAFEEIVRSLDKLENANIPSVTLSRREIHFEDVKYMQLQVERITIRNGQVPCQFQFISKPDEETYCKEWLTANPSKGFLLSDAEITVELEVFVNKSTATRLNSGEEKLEDILVLHLVNGKDYFLSITGNYLPSCFGSPIHTLCYMREPIQDMSAESIRRLTLMPVDMSDDPAQDEKPMDIPKELWMMVDHLNRNASQQEDLFQQPGLRSEFEQIRDCLDKGMYDTFLGSNHSVAEALLLFLESLPEPVICCRFYSSCLESASNYGLSCQIISDLPACHKNVFEYLMAFLRELLKNSGKNHLDVNILASVFGGLLLRPPPGHAAPDVAAKRKAQQFIRQFLLREDHLP
SIO_010081: INPP5B
subclass of: SO_0000673
so part of: INPP5B
location: join(440114..440384,440736..440765,441211..441321,443878..443971,444857..445027,445687..445788,446168..446282,446881..446997,447319..447506,447984..448095,448242..448351,449183..449318,449813..449923,450556..450718,450870..451105,451296..451409,451729..451813,452144..452271,452557..452668,453533..453657)
location: region:440114-453657:1
so has part: feature:440114-440384:1:exon
so has part: feature:440736-440765:1:exon
so has part: feature:441211-441321:1:exon
so has part: feature:443878-443971:1:exon
so has part: feature:444857-445027:1:exon
so has part: feature:445687-445788:1:exon
so has part: feature:446168-446282:1:exon
so has part: feature:446881-446997:1:exon
so has part: feature:447319-447506:1:exon
so has part: feature:447984-448095:1:exon
so has part: feature:448242-448351:1:exon
so has part: feature:449183-449318:1:exon
so has part: feature:449813-449923:1:exon
so has part: feature:450556-450718:1:exon
so has part: feature:450870-451105:1:exon
so has part: feature:451296-451409:1:exon
so has part: feature:451729-451813:1:exon
so has part: feature:452144-452271:1:exon
so has part: feature:452557-452668:1:exon
so has part: feature:453533-453657:1:exon

XP_041576645.1
type: Protein
SIO_000068: ncbiprotein

position:440114:1
position: 440114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:440114-440384:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:440736-440765:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:441211-441321:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:443878-443971:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:444857-445027:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:445687-445788:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:446168-446282:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:446881-446997:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:447319-447506:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:447984-448095:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:448242-448351:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:449183-449318:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:449813-449923:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:450556-450718:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:450870-451105:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:451296-451409:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:451729-451813:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:452144-452271:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:452557-452668:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:453533-453657:1:exon

INPP5B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: INPP5B
product: inositol polyphosphate-5-phosphatase B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 8 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 85 samples with support for all annotated introns
transcript id: XM_041720712.1
SIO_010081: INPP5B
subclass of: SO_0000673
so part of: INPP5B
location: join(440188..440384,440736..440765,441211..441321,443881..443971,444857..445027,445687..445788,446168..446282,446881..446997,447319..447506,447984..448095,448242..448351,449183..449318,449813..449923,450556..450718,450870..451105,451296..451409,451729..451813,452144..452271,452557..452668,453533..453728)
location: region:440188-453728:1
so has part: feature:440188-440384:1:exon
so has part: feature:440736-440765:1:exon
so has part: feature:441211-441321:1:exon
so has part: feature:443881-443971:1:exon
so has part: feature:444857-445027:1:exon
so has part: feature:445687-445788:1:exon
so has part: feature:446168-446282:1:exon
so has part: feature:446881-446997:1:exon
so has part: feature:447319-447506:1:exon
so has part: feature:447984-448095:1:exon
so has part: feature:448242-448351:1:exon
so has part: feature:449183-449318:1:exon
so has part: feature:449813-449923:1:exon
so has part: feature:450556-450718:1:exon
so has part: feature:450870-451105:1:exon
so has part: feature:451296-451409:1:exon
so has part: feature:451729-451813:1:exon
so has part: feature:452144-452271:1:exon
so has part: feature:452557-452668:1:exon
so has part: feature:453533-453728:1:exon

position:440188:1
position: 440188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:440188-440384:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:440736-440765:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:441211-441321:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:443881-443971:1:exon

position:443881:1
position: 443881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:444857-445027:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:445687-445788:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:446168-446282:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:446881-446997:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:447319-447506:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:447984-448095:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:448242-448351:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:449183-449318:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:449813-449923:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:450556-450718:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:450870-451105:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:451296-451409:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:451729-451813:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:452144-452271:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:452557-452668:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:453533-453728:1:exon

INPP5B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: INPP5B
product: inositol polyphosphate-5-phosphatase B, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 8 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_030290217.3
SIO_010081: INPP5B
subclass of: SO_0000673
so part of: INPP5B
location: join(440268..440620,440736..440765,441211..441321,443878..443971,444857..445027,445687..445788,446168..446282,446881..446997,447319..447506,447984..448095,448242..448351,449183..449318,449813..449923,450556..450718,450870..451105,451296..451409,451729..451813,452144..452271,452557..452668,453533..453728)
location: region:440268-453728:1
so has part: feature:440268-440620:1:exon
so has part: feature:440736-440765:1:exon
so has part: feature:441211-441321:1:exon
so has part: feature:443878-443971:1:exon
so has part: feature:444857-445027:1:exon
so has part: feature:445687-445788:1:exon
so has part: feature:446168-446282:1:exon
so has part: feature:446881-446997:1:exon
so has part: feature:447319-447506:1:exon
so has part: feature:447984-448095:1:exon
so has part: feature:448242-448351:1:exon
so has part: feature:449183-449318:1:exon
so has part: feature:449813-449923:1:exon
so has part: feature:450556-450718:1:exon
so has part: feature:450870-451105:1:exon
so has part: feature:451296-451409:1:exon
so has part: feature:451729-451813:1:exon
so has part: feature:452144-452271:1:exon
so has part: feature:452557-452668:1:exon
so has part: feature:453533-453728:1:exon

position:440268:1
position: 440268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:440268-440620:1:exon

position:440620:1
position: 440620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:440736-440765:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:441211-441321:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:443878-443971:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:444857-445027:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:445687-445788:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:446168-446282:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:446881-446997:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:447319-447506:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:447984-448095:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:448242-448351:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:449183-449318:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:449813-449923:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:450556-450718:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:450870-451105:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:451296-451409:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:451729-451813:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:452144-452271:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:452557-452668:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:453533-453728:1:exon

INPP5B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: INPP5B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: type II inositol 1,4,5-trisphosphate 5-phosphatase isoform X6
translation: MAITAEDVWLERIIPITDGFAVEEVVLDSDLHVIGSDVTVRITSADGGLTVQLPFGSQTRTFLQELSRCSAEAVGSEGVKQNGKKAAVSQSSSHDSTDRGTPRQSKLKSEVRTEQVRASRVMASNKASMLSEPKFGLRDTIVKSQLVQKEDSYTHIQNYRVFVGTYNVNGQSPTESLQPWLRCDAEPPDIYCVGFQELDLTKEAFFFNDTPKEEEWFKAVTDSLHPDAKYAKVKLVRLVGIMLLLYVKAELALNISEVEVETVGTGIMGRMGNKGAVAIRFKFHNTSVCIVNSHLAAHTEEYERRNQDFKDICSRMQFCQSDPNLPPLTIGKHDVILWLGDLNYRLEELDVAKVKQLVEEKAFLELCQYDQLKRQMKANAAFEGFTEGEISFQPTYKYDAGSDDWDTSEKCRVPAWCDRILWKGQRVAQLSYRSHMALKLSDHKPVSSVFDVGVKVVNEELYRKAFEEIVRSLDKLENANIPSVTLSRREIHFEDVKYMQLQVERITIRNGQVPCQFQFISKPDEETYCKEWLTANPSKGFLLSDAEITVELEVFVNKSTATRLNSGEEKLEDILVLHLVNGKDYFLSITGNYLPSCFGSPIHTLCYMREPIQDMSAESIRRLTLMPVDMSDDPAQDEKPMDIPKELWMMVDHLNRNASQQEDLFQQPGLRSEFEQIRDCLDKGMYDTFLGSNHSVAEALLLFLESLPEPVICCRFYSSCLESASNYGLSCQIISDLPACHKNVFEYLMAFLRELLKNSGKNHLDVNILASVFGGLLLRPPPGHAAPDVAAKRKAQQFIRQFLLREDHLP
SIO_010081: INPP5B
subclass of: SO_0000673
so part of: INPP5B
location: join(440312..440384,440736..440765,441211..441321,443878..443971,444857..445027,445687..445788,446168..446282,446881..446997,447319..447506,447984..448095,448242..448351,449183..449318,449813..449923,450556..450718,450870..451105,451296..451409,451729..451813,452144..452271,452557..452668,453533..453657)
location: region:440312-453657:1
so has part: feature:440312-440384:1:exon
so has part: feature:440736-440765:1:exon
so has part: feature:441211-441321:1:exon
so has part: feature:443878-443971:1:exon
so has part: feature:444857-445027:1:exon
so has part: feature:445687-445788:1:exon
so has part: feature:446168-446282:1:exon
so has part: feature:446881-446997:1:exon
so has part: feature:447319-447506:1:exon
so has part: feature:447984-448095:1:exon
so has part: feature:448242-448351:1:exon
so has part: feature:449183-449318:1:exon
so has part: feature:449813-449923:1:exon
so has part: feature:450556-450718:1:exon
so has part: feature:450870-451105:1:exon
so has part: feature:451296-451409:1:exon
so has part: feature:451729-451813:1:exon
so has part: feature:452144-452271:1:exon
so has part: feature:452557-452668:1:exon
so has part: feature:453533-453657:1:exon

XP_030146078.3
type: Protein
SIO_000068: ncbiprotein

position:440312:1
position: 440312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:440312-440384:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:440736-440765:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:441211-441321:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:443878-443971:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:444857-445027:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:445687-445788:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:446168-446282:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:446881-446997:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:447319-447506:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:447984-448095:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:448242-448351:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:449183-449318:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:449813-449923:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:450556-450718:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:450870-451105:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:451296-451409:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:451729-451813:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:452144-452271:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:452557-452668:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:453533-453657:1:exon

INPP5B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: INPP5B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: type II inositol 1,4,5-trisphosphate 5-phosphatase isoform X2
translation: MAITAEDVWLERIIPITDGFAVEEVVLDSDLHVIGSDVTVRITSADGGLTVQLPFGSQTRTFLQELSRCSAAVGSEGVKQNGKKAAVSQSSSHDSTDRGTPRQSKLKSEVRTEQVRASRVMASNKASMLSEPKFGLRDTIVKSQLVQKEDSYTHIQNYRVFVGTYNVNGQSPTESLQPWLRCDAEPPDIYCVGFQELDLTKEAFFFNDTPKEEEWFKAVTDSLHPDAKYAKVKLVRLVGIMLLLYVKAELALNISEVEVETVGTGIMGRMGNKGAVAIRFKFHNTSVCIVNSHLAAHTEEYERRNQDFKDICSRMQFCQSDPNLPPLTIGKHDVILWLGDLNYRLEELDVAKVKQLVEEKAFLELCQYDQLKRQMKANAAFEGFTEGEISFQPTYKYDAGSDDWDTSEKCRVPAWCDRILWKGQRVAQLSYRSHMALKLSDHKPVSSVFDVGVKVVNEELYRKAFEEIVRSLDKLENANIPSVTLSRREIHFEDVKYMQLQVERITIRNGQVPCQFQFISKPDEETYCKEWLTANPSKGFLLSDAEITVELEVFVNKSTATRLNSGEEKLEDILVLHLVNGKDYFLSITGNYLPSCFGSPIHTLCYMREPIQDMSAESIRRLTLMPVDMSDDPAQDEKPMDIPKELWMMVDHLNRNASQQEDLFQQPGLRSEFEQIRDCLDKGMYDTFLGSNHSVAEALLLFLESLPEPVICCRFYSSCLESASNYGLSCQIISDLPACHKNVFEYLMAFLRELLKNSGKNHLDVNILASVFGGLLLRPPPGHAAPDVAAKRKAQQFIRQFLLREDHLP
SIO_010081: INPP5B
subclass of: SO_0000673
so part of: INPP5B
location: join(440312..440384,440736..440765,441211..441321,443881..443971,444857..445027,445687..445788,446168..446282,446881..446997,447319..447506,447984..448095,448242..448351,449183..449318,449813..449923,450556..450718,450870..451105,451296..451409,451729..451813,452144..452271,452557..452668,453533..453657)
location: region:440312-453657:1
so has part: feature:440312-440384:1:exon
so has part: feature:440736-440765:1:exon
so has part: feature:441211-441321:1:exon
so has part: feature:443881-443971:1:exon
so has part: feature:444857-445027:1:exon
so has part: feature:445687-445788:1:exon
so has part: feature:446168-446282:1:exon
so has part: feature:446881-446997:1:exon
so has part: feature:447319-447506:1:exon
so has part: feature:447984-448095:1:exon
so has part: feature:448242-448351:1:exon
so has part: feature:449183-449318:1:exon
so has part: feature:449813-449923:1:exon
so has part: feature:450556-450718:1:exon
so has part: feature:450870-451105:1:exon
so has part: feature:451296-451409:1:exon
so has part: feature:451729-451813:1:exon
so has part: feature:452144-452271:1:exon
so has part: feature:452557-452668:1:exon
so has part: feature:453533-453657:1:exon

XP_041576646.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:440312-440384:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:440736-440765:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:441211-441321:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:443881-443971:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:444857-445027:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:445687-445788:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:446168-446282:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:446881-446997:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:447319-447506:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:447984-448095:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:448242-448351:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:449183-449318:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:449813-449923:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:450556-450718:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:450870-451105:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:451296-451409:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:451729-451813:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:452144-452271:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:452557-452668:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:453533-453657:1:exon

INPP5B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: INPP5B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: type II inositol 1,4,5-trisphosphate 5-phosphatase isoform X5
translation: MKGFGAHILLSCFLKFAIYSAFMFFNSLLSLVKLVHHVAFLAGPCEDQSTHVPPGPSHSPCPAVVLDSDLHVIGSDVTVRITSADGGLTVQLPFGSQTRTFLQELSRCSAEAVGSEGVKQNGKKAAVSQSSSHDSTDRGTPRQSKLKSEVRTEQVRASRVMASNKASMLSEPKFGLRDTIVKSQLVQKEDSYTHIQNYRVFVGTYNVNGQSPTESLQPWLRCDAEPPDIYCVGFQELDLTKEAFFFNDTPKEEEWFKAVTDSLHPDAKYAKVKLVRLVGIMLLLYVKAELALNISEVEVETVGTGIMGRMGNKGAVAIRFKFHNTSVCIVNSHLAAHTEEYERRNQDFKDICSRMQFCQSDPNLPPLTIGKHDVILWLGDLNYRLEELDVAKVKQLVEEKAFLELCQYDQLKRQMKANAAFEGFTEGEISFQPTYKYDAGSDDWDTSEKCRVPAWCDRILWKGQRVAQLSYRSHMALKLSDHKPVSSVFDVGVKVVNEELYRKAFEEIVRSLDKLENANIPSVTLSRREIHFEDVKYMQLQVERITIRNGQVPCQFQFISKPDEETYCKEWLTANPSKGFLLSDAEITVELEVFVNKSTATRLNSGEEKLEDILVLHLVNGKDYFLSITGNYLPSCFGSPIHTLCYMREPIQDMSAESIRRLTLMPVDMSDDPAQDEKPMDIPKELWMMVDHLNRNASQQEDLFQQPGLRSEFEQIRDCLDKGMYDTFLGSNHSVAEALLLFLESLPEPVICCRFYSSCLESASNYGLSCQIISDLPACHKNVFEYLMAFLRELLKNSGKNHLDVNILASVFGGLLLRPPPGHAAPDVAAKRKAQQFIRQFLLREDHLP
SIO_010081: INPP5B
subclass of: SO_0000673
so part of: INPP5B
location: join(440431..440620,440736..440765,441211..441321,443878..443971,444857..445027,445687..445788,446168..446282,446881..446997,447319..447506,447984..448095,448242..448351,449183..449318,449813..449923,450556..450718,450870..451105,451296..451409,451729..451813,452144..452271,452557..452668,453533..453657)
location: region:440431-453657:1
so has part: feature:440431-440620:1:exon
so has part: feature:440736-440765:1:exon
so has part: feature:441211-441321:1:exon
so has part: feature:443878-443971:1:exon
so has part: feature:444857-445027:1:exon
so has part: feature:445687-445788:1:exon
so has part: feature:446168-446282:1:exon
so has part: feature:446881-446997:1:exon
so has part: feature:447319-447506:1:exon
so has part: feature:447984-448095:1:exon
so has part: feature:448242-448351:1:exon
so has part: feature:449183-449318:1:exon
so has part: feature:449813-449923:1:exon
so has part: feature:450556-450718:1:exon
so has part: feature:450870-451105:1:exon
so has part: feature:451296-451409:1:exon
so has part: feature:451729-451813:1:exon
so has part: feature:452144-452271:1:exon
so has part: feature:452557-452668:1:exon
so has part: feature:453533-453657:1:exon

XP_030146077.3
type: Protein
SIO_000068: ncbiprotein

position:440431:1
position: 440431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:440431-440620:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:440736-440765:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:441211-441321:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:443878-443971:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:444857-445027:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:445687-445788:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:446168-446282:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:446881-446997:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:447319-447506:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:447984-448095:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:448242-448351:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:449183-449318:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:449813-449923:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:450556-450718:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:450870-451105:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:451296-451409:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:451729-451813:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:452144-452271:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:452557-452668:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:453533-453657:1:exon

INPP5B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: INPP5B
product: inositol polyphosphate-5-phosphatase B, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 8 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_030290219.3
SIO_010081: INPP5B
subclass of: SO_0000673
so part of: INPP5B
location: join(441591..441642,443878..443971,444857..445027,445687..445788,446168..446282,446881..446997,447319..447506,447984..448095,448242..448351,449183..449318,449813..449923,450556..450718,450870..451105,451296..451409,451729..451813,452144..452271,452557..452668,453533..453728)
location: region:441591-453728:1
so has part: feature:441591-441642:1:exon
so has part: feature:443878-443971:1:exon
so has part: feature:444857-445027:1:exon
so has part: feature:445687-445788:1:exon
so has part: feature:446168-446282:1:exon
so has part: feature:446881-446997:1:exon
so has part: feature:447319-447506:1:exon
so has part: feature:447984-448095:1:exon
so has part: feature:448242-448351:1:exon
so has part: feature:449183-449318:1:exon
so has part: feature:449813-449923:1:exon
so has part: feature:450556-450718:1:exon
so has part: feature:450870-451105:1:exon
so has part: feature:451296-451409:1:exon
so has part: feature:451729-451813:1:exon
so has part: feature:452144-452271:1:exon
so has part: feature:452557-452668:1:exon
so has part: feature:453533-453728:1:exon

position:441591:1
position: 441591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:441591-441642:1:exon

position:441642:1
position: 441642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:443878-443971:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:444857-445027:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:445687-445788:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:446168-446282:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:446881-446997:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:447319-447506:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:447984-448095:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:448242-448351:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:449183-449318:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:449813-449923:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:450556-450718:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:450870-451105:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:451296-451409:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:451729-451813:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:452144-452271:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:452557-452668:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:453533-453728:1:exon

INPP5B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: INPP5B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: type II inositol 1,4,5-trisphosphate 5-phosphatase isoform X7
translation: MSAGGRPRREAVGSEGVKQNGKKAAVSQSSSHDSTDRGTPRQSKLKSEVRTEQVRASRVMASNKASMLSEPKFGLRDTIVKSQLVQKEDSYTHIQNYRVFVGTYNVNGQSPTESLQPWLRCDAEPPDIYCVGFQELDLTKEAFFFNDTPKEEEWFKAVTDSLHPDAKYAKVKLVRLVGIMLLLYVKAELALNISEVEVETVGTGIMGRMGNKGAVAIRFKFHNTSVCIVNSHLAAHTEEYERRNQDFKDICSRMQFCQSDPNLPPLTIGKHDVILWLGDLNYRLEELDVAKVKQLVEEKAFLELCQYDQLKRQMKANAAFEGFTEGEISFQPTYKYDAGSDDWDTSEKCRVPAWCDRILWKGQRVAQLSYRSHMALKLSDHKPVSSVFDVGVKVVNEELYRKAFEEIVRSLDKLENANIPSVTLSRREIHFEDVKYMQLQVERITIRNGQVPCQFQFISKPDEETYCKEWLTANPSKGFLLSDAEITVELEVFVNKSTATRLNSGEEKLEDILVLHLVNGKDYFLSITGNYLPSCFGSPIHTLCYMREPIQDMSAESIRRLTLMPVDMSDDPAQDEKPMDIPKELWMMVDHLNRNASQQEDLFQQPGLRSEFEQIRDCLDKGMYDTFLGSNHSVAEALLLFLESLPEPVICCRFYSSCLESASNYGLSCQIISDLPACHKNVFEYLMAFLRELLKNSGKNHLDVNILASVFGGLLLRPPPGHAAPDVAAKRKAQQFIRQFLLREDHLP
SIO_010081: INPP5B
subclass of: SO_0000673
so part of: INPP5B
location: join(441615..441642,443878..443971,444857..445027,445687..445788,446168..446282,446881..446997,447319..447506,447984..448095,448242..448351,449183..449318,449813..449923,450556..450718,450870..451105,451296..451409,451729..451813,452144..452271,452557..452668,453533..453657)
location: region:441615-453657:1
so has part: feature:441615-441642:1:exon
so has part: feature:443878-443971:1:exon
so has part: feature:444857-445027:1:exon
so has part: feature:445687-445788:1:exon
so has part: feature:446168-446282:1:exon
so has part: feature:446881-446997:1:exon
so has part: feature:447319-447506:1:exon
so has part: feature:447984-448095:1:exon
so has part: feature:448242-448351:1:exon
so has part: feature:449183-449318:1:exon
so has part: feature:449813-449923:1:exon
so has part: feature:450556-450718:1:exon
so has part: feature:450870-451105:1:exon
so has part: feature:451296-451409:1:exon
so has part: feature:451729-451813:1:exon
so has part: feature:452144-452271:1:exon
so has part: feature:452557-452668:1:exon
so has part: feature:453533-453657:1:exon

XP_030146079.3
type: Protein
SIO_000068: ncbiprotein

position:441615:1
position: 441615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:441615-441642:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:443878-443971:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:444857-445027:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:445687-445788:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:446168-446282:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:446881-446997:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:447319-447506:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:447984-448095:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:448242-448351:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:449183-449318:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:449813-449923:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:450556-450718:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:450870-451105:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:451296-451409:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:451729-451813:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:452144-452271:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:452557-452668:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:453533-453657:1:exon

MTF1
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: MTF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 454406..465571
location: region:454406-465571:1
so has part: feature:454406-465571:1:exon
subclass of: SO_0000010

100218965
type: Gene
SIO_000068: ncbigene

position:454406:1
position: 454406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:465571:1
position: 465571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:454406-465571:1:exon

MTF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: MTF1
product: metal regulatory transcription factor 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 ESTs, 5 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 57 samples with support for all annotated introns
transcript id: XM_012570682.4
SIO_010081: MTF1
subclass of: SO_0000673
so part of: MTF1
location: join(454406..454500,454755..455207,459422..459660,460162..460293,460794..460867,461398..461531,462044..462121,462741..462843,463356..463915,464721..464787,464886..465571)
location: region:454406-465571:1
so has part: feature:454406-454500:1:exon
so has part: feature:454755-455207:1:exon
so has part: feature:459422-459660:1:exon
so has part: feature:460162-460293:1:exon
so has part: feature:460794-460867:1:exon
so has part: feature:461398-461531:1:exon
so has part: feature:462044-462121:1:exon
so has part: feature:462741-462843:1:exon
so has part: feature:463356-463915:1:exon
so has part: feature:464721-464787:1:exon
so has part: feature:464886-465571:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:454406-454500:1:exon

position:454500:1
position: 454500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:454755-455207:1:exon

position:454755:1
position: 454755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:455207:1
position: 455207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:459422-459660:1:exon

position:459422:1
position: 459422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:459660:1
position: 459660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:460162-460293:1:exon

position:460162:1
position: 460162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:460293:1
position: 460293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:460794-460867:1:exon

position:460794:1
position: 460794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:460867:1
position: 460867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:461398-461531:1:exon

position:461398:1
position: 461398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:461531:1
position: 461531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:462044-462121:1:exon

position:462044:1
position: 462044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:462121:1
position: 462121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:462741-462843:1:exon

position:462741:1
position: 462741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:462843:1
position: 462843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:463356-463915:1:exon

position:463356:1
position: 463356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:463915:1
position: 463915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:464721-464787:1:exon

position:464721:1
position: 464721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:464787:1
position: 464787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:464886-465571:1:exon

position:464886:1
position: 464886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MTF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: MTF1
product: metal regulatory transcription factor 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 ESTs, 3 long SRA reads, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 63 samples with support for all annotated introns
transcript id: XM_030290220.3
SIO_010081: MTF1
subclass of: SO_0000673
so part of: MTF1
location: join(454406..454500,454755..455207,459422..459660,460162..460293,460794..460867,461398..461531,462044..462121,462741..462843,463359..463915,464721..464787,464886..465571)
location: region:454406-465571:1
so has part: feature:454406-454500:1:exon
so has part: feature:454755-455207:1:exon
so has part: feature:459422-459660:1:exon
so has part: feature:460162-460293:1:exon
so has part: feature:460794-460867:1:exon
so has part: feature:461398-461531:1:exon
so has part: feature:462044-462121:1:exon
so has part: feature:462741-462843:1:exon
so has part: feature:463359-463915:1:exon
so has part: feature:464721-464787:1:exon
so has part: feature:464886-465571:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:454406-454500:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:454755-455207:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:459422-459660:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:460162-460293:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:460794-460867:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:461398-461531:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:462044-462121:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:462741-462843:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:463359-463915:1:exon

position:463359:1
position: 463359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:464721-464787:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:464886-465571:1:exon

MTF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: MTF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: metal regulatory transcription factor 1 isoform X1
translation: MGENSPEGNAVCCEAEEEDLAQDENMMRFADKNGLVSSSSGTVYDRTTVLIEQDHSVLEDEEDEGQCGDHLPFLPEGHEEGFHLIPDHEGMSQGYVQHIISPDQIHLTINPGSTPMPRNIEGATLTLQSECPETKRKEVKRYQCTFEGCPRTYSTAGNLRTHQKTHRGEYTFVCNQEGCGKAFLTSYSLKIHVRVHTKEKPFECDVQGCEKAFNTLYRLKAHQRLHTGKTFNCESEGCSKYFTTHSDLRKHIRTHTGEKPFRCEHDGCGKAFAASHHLKTHVRTHTGEKPFFCPSNGCEKTFSTQYSLKSHMKGHEKGHTYNALPNNNVSEDTSHSLCLSDLSLISTDSELRENSNPTHGQDLSTISPASIFESMFQSPDHTANQDDSQQTAASLIEGFNGDADSVAAVPPPAGDAASLSLPLVLQLGIPEPAQAALQASAAPAAPSSIAPSSQPAAFGNPATVLQSPEVPVPRSTPFAASHQDFLQHSQPPPQPIVQGLSVVAGAPAPTAPSATEPLPAVVQTVPVGANPVLTSNPTITITPSPSTAILQSSIVMGEQNLQWILNGATGSPQSQEQMPQVPKVVEKVFFTTALPVAGNTGNPVQQIGLSVPVIIIKQEEACQCQCACRDSAKDKATSTVKKECSSPDSKALEQPASQLQPQTFPSSSAPPPCGQSSQIVNPSDSQTETLSAMDVSDFLSLQSPETPSNIIPIEALLQGEEEIGLNSSFSK
SIO_010081: MTF1
subclass of: SO_0000673
so part of: MTF1
location: join(454794..455207,459422..459660,460162..460293,460794..460867,461398..461531,462044..462121,462741..462843,463356..463915,464721..464787,464886..465280)
location: region:454794-465280:1
so has part: feature:454794-455207:1:exon
so has part: feature:459422-459660:1:exon
so has part: feature:460162-460293:1:exon
so has part: feature:460794-460867:1:exon
so has part: feature:461398-461531:1:exon
so has part: feature:462044-462121:1:exon
so has part: feature:462741-462843:1:exon
so has part: feature:463356-463915:1:exon
so has part: feature:464721-464787:1:exon
so has part: feature:464886-465280:1:exon

XP_012426136.2
type: Protein
SIO_000068: ncbiprotein

position:454794:1
position: 454794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:465280:1
position: 465280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:454794-455207:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:459422-459660:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:460162-460293:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:460794-460867:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:461398-461531:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:462044-462121:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:462741-462843:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:463356-463915:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:464721-464787:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:464886-465280:1:exon

MTF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: MTF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: metal regulatory transcription factor 1 isoform X2
translation: MGENSPEGNAVCCEAEEEDLAQDENMMRFADKNGLVSSSSGTVYDRTTVLIEQDHSVLEDEEDEGQCGDHLPFLPEGHEEGFHLIPDHEGMSQGYVQHIISPDQIHLTINPGSTPMPRNIEGATLTLQSECPETKRKEVKRYQCTFEGCPRTYSTAGNLRTHQKTHRGEYTFVCNQEGCGKAFLTSYSLKIHVRVHTKEKPFECDVQGCEKAFNTLYRLKAHQRLHTGKTFNCESEGCSKYFTTHSDLRKHIRTHTGEKPFRCEHDGCGKAFAASHHLKTHVRTHTGEKPFFCPSNGCEKTFSTQYSLKSHMKGHEKGHTYNALPNNNVSEDTSHSLCLSDLSLISTDSELRENSNPTHGQDLSTISPASIFESMFQSPDHTANQDDSQQTASLIEGFNGDADSVAAVPPPAGDAASLSLPLVLQLGIPEPAQAALQASAAPAAPSSIAPSSQPAAFGNPATVLQSPEVPVPRSTPFAASHQDFLQHSQPPPQPIVQGLSVVAGAPAPTAPSATEPLPAVVQTVPVGANPVLTSNPTITITPSPSTAILQSSIVMGEQNLQWILNGATGSPQSQEQMPQVPKVVEKVFFTTALPVAGNTGNPVQQIGLSVPVIIIKQEEACQCQCACRDSAKDKATSTVKKECSSPDSKALEQPASQLQPQTFPSSSAPPPCGQSSQIVNPSDSQTETLSAMDVSDFLSLQSPETPSNIIPIEALLQGEEEIGLNSSFSK
SIO_010081: MTF1
subclass of: SO_0000673
so part of: MTF1
location: join(454794..455207,459422..459660,460162..460293,460794..460867,461398..461531,462044..462121,462741..462843,463359..463915,464721..464787,464886..465280)
location: region:454794-465280:1
so has part: feature:454794-455207:1:exon
so has part: feature:459422-459660:1:exon
so has part: feature:460162-460293:1:exon
so has part: feature:460794-460867:1:exon
so has part: feature:461398-461531:1:exon
so has part: feature:462044-462121:1:exon
so has part: feature:462741-462843:1:exon
so has part: feature:463359-463915:1:exon
so has part: feature:464721-464787:1:exon
so has part: feature:464886-465280:1:exon

XP_030146080.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:454794-455207:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:459422-459660:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:460162-460293:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:460794-460867:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:461398-461531:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:462044-462121:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:462741-462843:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:463359-463915:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:464721-464787:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:464886-465280:1:exon

LOC121471045
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121471045
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(471306..472317)
location: region:471306-472317:-1
so has part: feature:471306-472317:-1:exon
subclass of: SO_0000011

121471045
type: Gene
SIO_000068: ncbigene

position:471306:-1
position: 471306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:472317:-1
position: 472317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:471306-472317:-1:exon

LOC121471045
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC121471045
product: uncharacterized LOC121471045
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 59 samples with support for all annotated introns
transcript id: XR_005982434.1
SIO_010081: LOC121471045
subclass of: SO_0000673
so part of: LOC121471045
location: complement(join(471306..471669,472231..472317))
location: region:471306-472317:-1
so has part: feature:472231-472317:-1:exon
so has part: feature:471306-471669:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:472231-472317:-1:exon

position:472231:-1
position: 472231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:471306-471669:-1:exon

position:471669:-1
position: 471669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

YRDC
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: YRDC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 472332..474777
location: region:472332-474777:1
so has part: feature:472332-474777:1:exon
subclass of: SO_0000010

100217977
type: Gene
SIO_000068: ncbigene

position:472332:1
position: 472332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:474777:1
position: 474777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:472332-474777:1:exon

YRDC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: YRDC
product: yrdC N6-threonylcarbamoyltransferase domain containing
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 10 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 153 samples with support for all annotated introns
transcript id: XM_041720752.1
SIO_010081: YRDC
subclass of: SO_0000673
so part of: YRDC
location: join(472332..472750,473083..473197,473375..473494,473653..473795,474128..474777)
location: region:472332-474777:1
so has part: feature:472332-472750:1:exon
so has part: feature:473083-473197:1:exon
so has part: feature:473375-473494:1:exon
so has part: feature:473653-473795:1:exon
so has part: feature:474128-474777:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:472332-472750:1:exon

position:472750:1
position: 472750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:473083-473197:1:exon

position:473083:1
position: 473083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:473197:1
position: 473197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:473375-473494:1:exon

position:473375:1
position: 473375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:473494:1
position: 473494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:473653-473795:1:exon

position:473653:1
position: 473653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:473795:1
position: 473795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:474128-474777:1:exon

position:474128:1
position: 474128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

YRDC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: YRDC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: yrdC domain-containing protein, mitochondrial
translation: MARAALAVARAAERAAGPGPGPGLGLGPGRARLVLLPPAGEPAERGGRAGGGSAPVEPGRVAPERGRPAEWREAVAAAAGALQAGGLVAVPTDTVYGVACLAQDSAAVRSIYSLKGRNGSKPLAICLGDVERLYRYCHVNVPDQLLRDLLPGPVTLVLERSEELNKDLNPFTSLVGVRIPDHPFMRDLARACSGPLALTSANISSQGSTLTVLEFQDLWPQLSLVVDGGPIGDIQSPECRLGSTVVDLSVSGKFSIIRPGCALTPTVEILKKKYGLVPESS
SIO_010081: YRDC
subclass of: SO_0000673
so part of: YRDC
location: join(472347..472750,473083..473197,473375..473494,473653..473795,474128..474191)
location: region:472347-474191:1
so has part: feature:472347-472750:1:exon
so has part: feature:473083-473197:1:exon
so has part: feature:473375-473494:1:exon
so has part: feature:473653-473795:1:exon
so has part: feature:474128-474191:1:exon

XP_041576686.1
type: Protein
SIO_000068: ncbiprotein

position:472347:1
position: 472347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:474191:1
position: 474191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:472347-472750:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:473083-473197:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:473375-473494:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:473653-473795:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:474128-474191:1:exon

LOC116809251
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC116809251
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(481902..484705)
location: region:481902-484705:-1
so has part: feature:481902-484705:-1:exon
subclass of: SO_0000011

116809251
type: Gene
SIO_000068: ncbigene

position:481902:-1
position: 481902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:484705:-1
position: 484705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:481902-484705:-1:exon

LOC116809251
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC116809251
product: uncharacterized LOC116809251
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004369719.2
SIO_010081: LOC116809251
subclass of: SO_0000673
so part of: LOC116809251
location: complement(join(481902..483107,483417..484705))
location: region:481902-484705:-1
so has part: feature:483417-484705:-1:exon
so has part: feature:481902-483107:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:483417-484705:-1:exon

position:483417:-1
position: 483417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:481902-483107:-1:exon

position:483107:-1
position: 483107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

EPHA10
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: EPHA10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 485433..508672
location: region:485433-508672:1
so has part: feature:485433-508672:1:exon
subclass of: SO_0000010

100230431
type: Gene
SIO_000068: ncbigene

position:485433:1
position: 485433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:508672:1
position: 508672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:485433-508672:1:exon

EPHA10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: EPHA10
product: EPH receptor A10, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 32 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_030290391.3
SIO_010081: EPHA10
subclass of: SO_0000673
so part of: EPHA10
location: join(485433..485487,486549..486613,486817..487486,494506..494661,496422..496763,500030..500154,501467..501629,502633..502741,502833..502888,503633..503758,504921..505106,505780..505841,505928..506131,506640..506789,506937..507130,507204..507368,508141..508672)
location: region:485433-508672:1
so has part: feature:485433-485487:1:exon
so has part: feature:486549-486613:1:exon
so has part: feature:486817-487486:1:exon
so has part: feature:494506-494661:1:exon
so has part: feature:496422-496763:1:exon
so has part: feature:500030-500154:1:exon
so has part: feature:501467-501629:1:exon
so has part: feature:502633-502741:1:exon
so has part: feature:502833-502888:1:exon
so has part: feature:503633-503758:1:exon
so has part: feature:504921-505106:1:exon
so has part: feature:505780-505841:1:exon
so has part: feature:505928-506131:1:exon
so has part: feature:506640-506789:1:exon
so has part: feature:506937-507130:1:exon
so has part: feature:507204-507368:1:exon
so has part: feature:508141-508672:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:485433-485487:1:exon

position:485487:1
position: 485487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:486549-486613:1:exon

position:486549:1
position: 486549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:486613:1
position: 486613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:486817-487486:1:exon

position:486817:1
position: 486817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:487486:1
position: 487486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:494506-494661:1:exon

position:494506:1
position: 494506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:494661:1
position: 494661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:496422-496763:1:exon

position:496422:1
position: 496422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:496763:1
position: 496763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:500030-500154:1:exon

position:500030:1
position: 500030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:500154:1
position: 500154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:501467-501629:1:exon

position:501467:1
position: 501467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:501629:1
position: 501629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:502633-502741:1:exon

position:502633:1
position: 502633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:502741:1
position: 502741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:502833-502888:1:exon

position:502833:1
position: 502833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:502888:1
position: 502888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:503633-503758:1:exon

position:503633:1
position: 503633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:503758:1
position: 503758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:504921-505106:1:exon

position:504921:1
position: 504921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:505106:1
position: 505106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:505780-505841:1:exon

position:505780:1
position: 505780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:505841:1
position: 505841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:505928-506131:1:exon

position:505928:1
position: 505928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:506131:1
position: 506131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:506640-506789:1:exon

position:506640:1
position: 506640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:506789:1
position: 506789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:506937-507130:1:exon

position:506937:1
position: 506937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:507130:1
position: 507130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:507204-507368:1:exon

position:507204:1
position: 507204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:507368:1
position: 507368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:508141-508672:1:exon

position:508141:1
position: 508141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

EPHA10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: EPHA10
product: EPH receptor A10, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030290390.3
SIO_010081: EPHA10
subclass of: SO_0000673
so part of: EPHA10
location: join(485530..486474,486549..486613,486817..487486,494506..494661,496422..496763,500030..500154,501467..501629,502633..502741,502833..502888,503633..503758,504921..505106,505780..505841,505928..506131,506640..506789,506937..507130,507204..507368,508141..508672)
location: region:485530-508672:1
so has part: feature:485530-486474:1:exon
so has part: feature:486549-486613:1:exon
so has part: feature:486817-487486:1:exon
so has part: feature:494506-494661:1:exon
so has part: feature:496422-496763:1:exon
so has part: feature:500030-500154:1:exon
so has part: feature:501467-501629:1:exon
so has part: feature:502633-502741:1:exon
so has part: feature:502833-502888:1:exon
so has part: feature:503633-503758:1:exon
so has part: feature:504921-505106:1:exon
so has part: feature:505780-505841:1:exon
so has part: feature:505928-506131:1:exon
so has part: feature:506640-506789:1:exon
so has part: feature:506937-507130:1:exon
so has part: feature:507204-507368:1:exon
so has part: feature:508141-508672:1:exon

position:485530:1
position: 485530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:485530-486474:1:exon

position:486474:1
position: 486474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:486549-486613:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:486817-487486:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:494506-494661:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:496422-496763:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:500030-500154:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:501467-501629:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:502633-502741:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:502833-502888:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:503633-503758:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:504921-505106:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:505780-505841:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:505928-506131:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:506640-506789:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:506937-507130:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:507204-507368:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:508141-508672:1:exon

EPHA10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: EPHA10
product: EPH receptor A10, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_041720765.1
SIO_010081: EPHA10
subclass of: SO_0000673
so part of: EPHA10
location: join(485530..486474,486549..486613,486817..487486,494506..494661,496422..496763,500030..500154,501467..501629,502633..502741,502833..502888,503633..503758,504921..505106,505780..506056)
location: region:485530-506056:1
so has part: feature:485530-486474:1:exon
so has part: feature:486549-486613:1:exon
so has part: feature:486817-487486:1:exon
so has part: feature:494506-494661:1:exon
so has part: feature:496422-496763:1:exon
so has part: feature:500030-500154:1:exon
so has part: feature:501467-501629:1:exon
so has part: feature:502633-502741:1:exon
so has part: feature:502833-502888:1:exon
so has part: feature:503633-503758:1:exon
so has part: feature:504921-505106:1:exon
so has part: feature:505780-506056:1:exon

position:506056:1
position: 506056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:485530-486474:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:486549-486613:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:486817-487486:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:494506-494661:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:496422-496763:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:500030-500154:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:501467-501629:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:502633-502741:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:502833-502888:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:503633-503758:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:504921-505106:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:505780-506056:1:exon

EPHA10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: EPHA10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ephrin type-A receptor 10 isoform X1
translation: MHGLVVLLDSKESQAELGWTSHPSNGWEEISGVDETYRPIRTYQVCNVMEPNQNNWLQTGWIARRDGQRIFIELKFTLRDCNSIPGVTSTCKETFNLYYVESDSDLGRSVRDSRHTKIDTIAADESFTQGDLGERKMKLNTELREIGHLSKRGFHLGFQDVGACVALVSVRVYYKKCLSTVQNLAMFPDTVAETAFVTLVEVKGTCVAHAEVDVDNPPRMHCSAEGEWLVPIGKCMCSPGFEEKDGGCRACLPGFYKLSLRLPLCSPCPEHSFTHEEASTFCLCQTNYSRSPSDPPSASCTRPPSAPRDLVYSLRQSSLVLQWSAPADAGGRSDLTYSLWCGRCPAVPAGRCQHCGSSVGFVPQQTGLVERTVTLVNLLPHVNYTIRVLALNGVSALSPLAGQQYAEVTVSTGHTVPTPVTDIRTDKVEQKSVSLSWQEPGFLTANGTEYEVKYFEKDQRDQSYSTVKTTSTAVTVNNLKPGTLYIFQIRTSSSPDYGNYNPGIEVETLAELTVASREQKPVLIIAVVATVGLTVLVSVLVSVVVWRRQCGYSKASQDGDEELYFHFKIPTRRTYIDPSTCEDPMQAVHLFAKELDNASIKIERIIRTGEFGELCRGCLKLPSKRELPVAIQTLRAGCSEKQQRSFLAEACTMGQFDHSNVIRLEGVITRGSTMMIVMEYMGNGLLDSFLRKHEGQLTGTQLICMLQGIASGMAYLAEMGYVHKSLAAHKVLVSSSLACKITGFRRPQEDKMETIFSTMRGKSLVLWSAPEAVQYHHFSPASDVWSFGIVMWEVMSYGERPYWDMSHQDVMKAVEDGFRLPAPANCQPPLHQLMLSCWQKERSQRPKFSQIHNALSKLLQSLEPPECPSSTCPRSHGTSLPLSKRAFSAFPSFSSVAEWLEAIEMGRYKDNFTAAGYCCLESVARMTAQDILSLGITLAEHQETLLSGIQSLRAQVIRMHGRGVQV
SIO_010081: EPHA10
subclass of: SO_0000673
so part of: EPHA10
location: join(486462..486474,486549..486613,486817..487486,494506..494661,496422..496763,500030..500154,501467..501629,502633..502741,502833..502888,503633..503758,504921..505106,505780..505841,505928..506131,506640..506789,506937..507130,507204..507368,508141..508255)
location: region:486462-508255:1
so has part: feature:486462-486474:1:exon
so has part: feature:486549-486613:1:exon
so has part: feature:486817-487486:1:exon
so has part: feature:494506-494661:1:exon
so has part: feature:496422-496763:1:exon
so has part: feature:500030-500154:1:exon
so has part: feature:501467-501629:1:exon
so has part: feature:502633-502741:1:exon
so has part: feature:502833-502888:1:exon
so has part: feature:503633-503758:1:exon
so has part: feature:504921-505106:1:exon
so has part: feature:505780-505841:1:exon
so has part: feature:505928-506131:1:exon
so has part: feature:506640-506789:1:exon
so has part: feature:506937-507130:1:exon
so has part: feature:507204-507368:1:exon
so has part: feature:508141-508255:1:exon

XP_030146250.3
type: Protein
SIO_000068: ncbiprotein

position:486462:1
position: 486462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:508255:1
position: 508255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:486462-486474:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:486549-486613:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:486817-487486:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:494506-494661:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:496422-496763:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:500030-500154:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:501467-501629:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:502633-502741:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:502833-502888:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:503633-503758:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:504921-505106:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:505780-505841:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:505928-506131:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:506640-506789:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:506937-507130:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:507204-507368:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:508141-508255:1:exon

EPHA10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: EPHA10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ephrin type-A receptor 10 isoform X3
translation: MHGLVVLLDSKESQAELGWTSHPSNGWEEISGVDETYRPIRTYQVCNVMEPNQNNWLQTGWIARRDGQRIFIELKFTLRDCNSIPGVTSTCKETFNLYYVESDSDLGRSVRDSRHTKIDTIAADESFTQGDLGERKMKLNTELREIGHLSKRGFHLGFQDVGACVALVSVRVYYKKCLSTVQNLAMFPDTVAETAFVTLVEVKGTCVAHAEVDVDNPPRMHCSAEGEWLVPIGKCMCSPGFEEKDGGCRACLPGFYKLSLRLPLCSPCPEHSFTHEEASTFCLCQTNYSRSPSDPPSASCTRPPSAPRDLVYSLRQSSLVLQWSAPADAGGRSDLTYSLWCGRCPAVPAGRCQHCGSSVGFVPQQTGLVERTVTLVNLLPHVNYTIRVLALNGVSALSPLAGQQYAEVTVSTGHTVPTPVTDIRTDKVEQKSVSLSWQEPGFLTANGTEYEVKYFEKDQRDQSYSTVKTTSTAVTVNNLKPGTLYIFQIRTSSSPDYGNYNPGIEVETLAELTVASREQKPVLIIAVVATVGLTVLVSVLVSVVVWRRQCGYSKASQDGDEELYFHFKIPTRRTYIDPSTCEDPMQAVHLFAKELDNASIKIERIIRTGEFGELCRGCLKLPSKRELPVAIQTLRAGCSEKQQRSFLAEACTMGQFDHSNVIRLEGVITRGSTMMIVMEYMGNGLLDSFLRVSMGCLPSLDSPGRVPTAALWLLLLCFHRNTRGSSQARS
SIO_010081: EPHA10
subclass of: SO_0000673
so part of: EPHA10
location: join(486462..486474,486549..486613,486817..487486,494506..494661,496422..496763,500030..500154,501467..501629,502633..502741,502833..502888,503633..503758,504921..505106,505780..505961)
location: region:486462-505961:1
so has part: feature:486462-486474:1:exon
so has part: feature:486549-486613:1:exon
so has part: feature:486817-487486:1:exon
so has part: feature:494506-494661:1:exon
so has part: feature:496422-496763:1:exon
so has part: feature:500030-500154:1:exon
so has part: feature:501467-501629:1:exon
so has part: feature:502633-502741:1:exon
so has part: feature:502833-502888:1:exon
so has part: feature:503633-503758:1:exon
so has part: feature:504921-505106:1:exon
so has part: feature:505780-505961:1:exon

XP_041576699.1
type: Protein
SIO_000068: ncbiprotein

position:505961:1
position: 505961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:486462-486474:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:486549-486613:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:486817-487486:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:494506-494661:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:496422-496763:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:500030-500154:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:501467-501629:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:502633-502741:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:502833-502888:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:503633-503758:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:504921-505106:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:505780-505961:1:exon

EPHA10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: EPHA10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ephrin type-A receptor 10 isoform X2
translation: MEPNQNNWLQTGWIARRDGQRIFIELKFTLRDCNSIPGVTSTCKETFNLYYVESDSDLGRSVRDSRHTKIDTIAADESFTQGDLGERKMKLNTELREIGHLSKRGFHLGFQDVGACVALVSVRVYYKKCLSTVQNLAMFPDTVAETAFVTLVEVKGTCVAHAEVDVDNPPRMHCSAEGEWLVPIGKCMCSPGFEEKDGGCRACLPGFYKLSLRLPLCSPCPEHSFTHEEASTFCLCQTNYSRSPSDPPSASCTRPPSAPRDLVYSLRQSSLVLQWSAPADAGGRSDLTYSLWCGRCPAVPAGRCQHCGSSVGFVPQQTGLVERTVTLVNLLPHVNYTIRVLALNGVSALSPLAGQQYAEVTVSTGHTVPTPVTDIRTDKVEQKSVSLSWQEPGFLTANGTEYEVKYFEKDQRDQSYSTVKTTSTAVTVNNLKPGTLYIFQIRTSSSPDYGNYNPGIEVETLAELTVASREQKPVLIIAVVATVGLTVLVSVLVSVVVWRRQCGYSKASQDGDEELYFHFKIPTRRTYIDPSTCEDPMQAVHLFAKELDNASIKIERIIRTGEFGELCRGCLKLPSKRELPVAIQTLRAGCSEKQQRSFLAEACTMGQFDHSNVIRLEGVITRGSTMMIVMEYMGNGLLDSFLRKHEGQLTGTQLICMLQGIASGMAYLAEMGYVHKSLAAHKVLVSSSLACKITGFRRPQEDKMETIFSTMRGKSLVLWSAPEAVQYHHFSPASDVWSFGIVMWEVMSYGERPYWDMSHQDVMKAVEDGFRLPAPANCQPPLHQLMLSCWQKERSQRPKFSQIHNALSKLLQSLEPPECPSSTCPRSHGTSLPLSKRAFSAFPSFSSVAEWLEAIEMGRYKDNFTAAGYCCLESVARMTAQDILSLGITLAEHQETLLSGIQSLRAQVIRMHGRGVQV
SIO_010081: EPHA10
subclass of: SO_0000673
so part of: EPHA10
location: join(486883..487486,494506..494661,496422..496763,500030..500154,501467..501629,502633..502741,502833..502888,503633..503758,504921..505106,505780..505841,505928..506131,506640..506789,506937..507130,507204..507368,508141..508255)
location: region:486883-508255:1
so has part: feature:486883-487486:1:exon
so has part: feature:494506-494661:1:exon
so has part: feature:496422-496763:1:exon
so has part: feature:500030-500154:1:exon
so has part: feature:501467-501629:1:exon
so has part: feature:502633-502741:1:exon
so has part: feature:502833-502888:1:exon
so has part: feature:503633-503758:1:exon
so has part: feature:504921-505106:1:exon
so has part: feature:505780-505841:1:exon
so has part: feature:505928-506131:1:exon
so has part: feature:506640-506789:1:exon
so has part: feature:506937-507130:1:exon
so has part: feature:507204-507368:1:exon
so has part: feature:508141-508255:1:exon

XP_030146251.3
type: Protein
SIO_000068: ncbiprotein

position:486883:1
position: 486883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:486883-487486:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:494506-494661:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:496422-496763:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:500030-500154:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:501467-501629:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:502633-502741:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:502833-502888:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:503633-503758:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:504921-505106:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:505780-505841:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:505928-506131:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:506640-506789:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:506937-507130:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:507204-507368:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:508141-508255:1:exon

CDCA8
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: CDCA8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(515954..520090)
location: region:515954-520090:-1
so has part: feature:515954-520090:-1:exon
subclass of: SO_0000010

105758801
type: Gene
SIO_000068: ncbigene

position:515954:-1
position: 515954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:520090:-1
position: 520090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:515954-520090:-1:exon

CDCA8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: CDCA8
product: cell division cycle associated 8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 long SRA read, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 67 samples with support for all annotated introns
transcript id: XM_030290400.3
SIO_010081: CDCA8
subclass of: SO_0000673
so part of: CDCA8
location: complement(join(515954..516146,516463..516549,517233..517359,517524..517622,517935..518008,518288..518418,518748..518823,519320..519360,519657..519785,519870..520090))
location: region:515954-520090:-1
so has part: feature:519870-520090:-1:exon
so has part: feature:519657-519785:-1:exon
so has part: feature:519320-519360:-1:exon
so has part: feature:518748-518823:-1:exon
so has part: feature:518288-518418:-1:exon
so has part: feature:517935-518008:-1:exon
so has part: feature:517524-517622:-1:exon
so has part: feature:517233-517359:-1:exon
so has part: feature:516463-516549:-1:exon
so has part: feature:515954-516146:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:519870-520090:-1:exon

position:519870:-1
position: 519870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:519657-519785:-1:exon

position:519657:-1
position: 519657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:519785:-1
position: 519785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:519320-519360:-1:exon

position:519320:-1
position: 519320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:519360:-1
position: 519360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:518748-518823:-1:exon

position:518748:-1
position: 518748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:518823:-1
position: 518823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:518288-518418:-1:exon

position:518288:-1
position: 518288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:518418:-1
position: 518418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:517935-518008:-1:exon

position:517935:-1
position: 517935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:518008:-1
position: 518008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:517524-517622:-1:exon

position:517524:-1
position: 517524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:517622:-1
position: 517622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:517233-517359:-1:exon

position:517233:-1
position: 517233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:517359:-1
position: 517359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:516463-516549:-1:exon

position:516463:-1
position: 516463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:516549:-1
position: 516549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:515954-516146:-1:exon

position:516146:-1
position: 516146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CDCA8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: CDCA8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: borealin
translation: MAPARKKGSCATRRRKMEAFLQDFDREVARRLKRIEADGERMVQEVEHMYDMAILRLPPEIREMNWLQFFALARSKNTPEDVAKVDREITKIRRLSTEGIDPLLDVAEKVSKIKRSVEADEEAEPTSLPRQKRSRLASQCSSEAEAGDTRTAKVKASTKKPPTARRPPSATVKGMSKRSSKNSFITPATGRMVDICAQGGTSMITPRFDPRVFRTPGLRTPAINERVYTFSAKGSPLAEPEDVILTVPLGGGESIRLTEKDLTKKNFLQLNPKAQGLMKKLSVCLTQACKDTKMPLDGSQ
SIO_010081: CDCA8
subclass of: SO_0000673
so part of: CDCA8
location: complement(join(516090..516146,516463..516549,517233..517359,517524..517622,517935..518008,518288..518418,518748..518823,519320..519360,519657..519785,519870..519951))
location: region:516090-519951:-1
so has part: feature:519870-519951:-1:exon
so has part: feature:519657-519785:-1:exon
so has part: feature:519320-519360:-1:exon
so has part: feature:518748-518823:-1:exon
so has part: feature:518288-518418:-1:exon
so has part: feature:517935-518008:-1:exon
so has part: feature:517524-517622:-1:exon
so has part: feature:517233-517359:-1:exon
so has part: feature:516463-516549:-1:exon
so has part: feature:516090-516146:-1:exon

XP_030146260.3
type: Protein
SIO_000068: ncbiprotein

position:516090:-1
position: 516090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:519951:-1
position: 519951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:519870-519951:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:519657-519785:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:519320-519360:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:518748-518823:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:518288-518418:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:517935-518008:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:517524-517622:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:517233-517359:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:516463-516549:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:516090-516146:-1:exon

C23H1orf109
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: C23H1orf109
note: chromosome 23 C1orf109 homolog; Derived by automated computational analysis using gene prediction method: BestRefSeq,Gnomon.
so part of: sequence
location: 520331..521893
location: region:520331-521893:1
so has part: feature:520331-521893:1:exon
subclass of: SO_0000010

100190424
type: Gene
SIO_000068: ncbigene

position:520331:1
position: 520331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:521893:1
position: 521893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:520331-521893:1:exon

C23H1orf109
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: C23H1orf109
product: chromosome 23 C1orf109 homolog, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 48 samples with support for all annotated introns
transcript id: XM_032752470.2
SIO_010081: C23H1orf109
subclass of: SO_0000673
so part of: C23H1orf109
location: join(520331..520625,520718..520900,520974..521095,521414..521886)
location: region:520331-521886:1
so has part: feature:520331-520625:1:exon
so has part: feature:520718-520900:1:exon
so has part: feature:520974-521095:1:exon
so has part: feature:521414-521886:1:exon

position:521886:1
position: 521886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:520331-520625:1:exon

position:520625:1
position: 520625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:520718-520900:1:exon

position:520718:1
position: 520718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:520900:1
position: 520900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:520974-521095:1:exon

position:520974:1
position: 520974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:521095:1
position: 521095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:521414-521886:1:exon

position:521414:1
position: 521414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

C23H1orf109
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: C23H1orf109
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C1orf109 homolog isoform X1
translation: MLILMLLMGTMAAPAAALRAWAEAVARAAAAARAAVAAAAPALGSLAALAAQVRALRRLPRGAAPLGAFPDLRARLWLKQRGAAEALLEQLGERREELRAVRDAVGAAGSAVLRLLEQRGPAEPRLAAVLRRGPRCPSLADVLEGLQDVERFYRHLYLEIKLLLQRLSLDSLADVEALPQSWERILERYKDDVVQGNTLLKVSLFVENHHEVSCSPGS
SIO_010081: C23H1orf109
subclass of: SO_0000673
so part of: C23H1orf109
location: join(520342..520625,520718..520900,520974..521095,521414..521481)
location: region:520342-521481:1
so has part: feature:520342-520625:1:exon
so has part: feature:520718-520900:1:exon
so has part: feature:520974-521095:1:exon
so has part: feature:521414-521481:1:exon

XP_032608361.2
type: Protein
SIO_000068: ncbiprotein

position:520342:1
position: 520342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:521481:1
position: 521481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:520342-520625:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:520718-520900:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:520974-521095:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:521414-521481:1:exon

C23H1orf109
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: C23H1orf109
product: chromosome 23 C1orf109 homolog
inference: similar to RNA sequence, mRNA (same species):RefSeq:NM_001245724.2
exception: annotated by transcript or proteomic data
note: The RefSeq transcript has 10 substitutions compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001245724.2
SIO_010081: C23H1orf109
subclass of: SO_0000673
so part of: C23H1orf109
location: join(520358..520625,520718..520900,520974..521092,521414..521893)
location: region:520358-521893:1
so has part: feature:520358-520625:1:exon
so has part: feature:520718-520900:1:exon
so has part: feature:520974-521092:1:exon
so has part: feature:521414-521893:1:exon

position:520358:1
position: 520358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:520358-520625:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:520718-520900:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:520974-521092:1:exon

position:521092:1
position: 521092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:521414-521893:1:exon

C23H1orf109
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: C23H1orf109
inference: similar to AA sequence (same species):RefSeq:NP_001232653.1
exception: annotated by transcript or proteomic data
note: The RefSeq protein has 2 substitutions compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: uncharacterized protein C1orf109 homolog
translation: MMGTMAAPAAALRAWAEAVARAAEAARAAVAAAAPALGSLAALAAQVRALRRLPRGAAPLGAFPDLRARLWLKQRGAAEALLEQLGERREELRAVRDAVGAAGSAVLRLLEQRGPAEPRLAAVLRRGPRCPSLADVLEGLQDVERYYRHLYLEIKLLLQRLSLDSLADVEALPQSWERILERYKDDVVQDTLLKVSLFVENHHEVSCSPGS
SIO_010081: C23H1orf109
subclass of: SO_0000673
so part of: C23H1orf109
location: join(520360..520625,520718..520900,520974..521092,521414..521481)
location: region:520360-521481:1
so has part: feature:520360-520625:1:exon
so has part: feature:520718-520900:1:exon
so has part: feature:520974-521092:1:exon
so has part: feature:521414-521481:1:exon

NP_001232653.1
type: Protein
SIO_000068: ncbiprotein

position:520360:1
position: 520360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:520360-520625:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:520718-520900:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:520974-521092:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:521414-521481:1:exon

RSPO1
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: RSPO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 584039..600751
location: region:584039-600751:1
so has part: feature:584039-600751:1:exon
subclass of: SO_0000010

100231446
type: Gene
SIO_000068: ncbigene

position:584039:1
position: 584039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:600751:1
position: 600751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:584039-600751:1:exon

RSPO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: RSPO1
product: R-spondin 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 1 EST, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_002198233.4
SIO_010081: RSPO1
subclass of: SO_0000673
so part of: RSPO1
location: join(584039..584666,593821..594206,595682..595873,596610..596759,597093..597281,597978..600751)
location: region:584039-600751:1
so has part: feature:584039-584666:1:exon
so has part: feature:593821-594206:1:exon
so has part: feature:595682-595873:1:exon
so has part: feature:596610-596759:1:exon
so has part: feature:597093-597281:1:exon
so has part: feature:597978-600751:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:584039-584666:1:exon

position:584666:1
position: 584666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:593821-594206:1:exon

position:593821:1
position: 593821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:594206:1
position: 594206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:595682-595873:1:exon

position:595682:1
position: 595682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:595873:1
position: 595873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:596610-596759:1:exon

position:596610:1
position: 596610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:596759:1
position: 596759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:597093-597281:1:exon

position:597093:1
position: 597093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:597281:1
position: 597281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:597978-600751:1:exon

position:597978:1
position: 597978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RSPO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: RSPO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: R-spondin-1
translation: MQLGLLVVVVFLSSMDLTGSSKVVKGKRQRRISTELSQGCARGCDLCSEFNGCLRCSPKLFILLERNDIRQIGICLPSCPLGYFGLRNTDMNKCIKCKIENCESCFSRNFCTKCKEGLYLHKGRCYVTCPEGYAAANGTMECSSPAQCEMSEWGPWGPCSKKRKLCGFKKGNEDRTRRILQAPSGDVSLCPATTEVRRCTVQKSQCPEGKRKKKEEQGKQDNGNRNRKDTKDTKSGTKKRKNKQRGATVPATPASPAQ
SIO_010081: RSPO1
subclass of: SO_0000673
so part of: RSPO1
location: join(594113..594206,595682..595873,596610..596759,597093..597281,597978..598129)
location: region:594113-598129:1
so has part: feature:594113-594206:1:exon
so has part: feature:595682-595873:1:exon
so has part: feature:596610-596759:1:exon
so has part: feature:597093-597281:1:exon
so has part: feature:597978-598129:1:exon

XP_002198269.1
type: Protein
SIO_000068: ncbiprotein

position:594113:1
position: 594113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:598129:1
position: 598129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:594113-594206:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:595682-595873:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:596610-596759:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:597093-597281:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:597978-598129:1:exon

LOC115498236
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC115498236
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(601539..604916)
location: region:601539-604916:-1
so has part: feature:601539-604916:-1:exon
subclass of: SO_0000011

115498236
type: Gene
SIO_000068: ncbigene

position:601539:-1
position: 601539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:604916:-1
position: 604916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:601539-604916:-1:exon

LOC115498236
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC115498236
product: uncharacterized LOC115498236
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 76 samples with support for all annotated introns
transcript id: XR_005982417.1
SIO_010081: LOC115498236
subclass of: SO_0000673
so part of: LOC115498236
location: complement(join(601539..602449,604669..604916))
location: region:601539-604916:-1
so has part: feature:604669-604916:-1:exon
so has part: feature:601539-602449:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:604669-604916:-1:exon

position:604669:-1
position: 604669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:601539-602449:-1:exon

position:602449:-1
position: 602449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GNL2
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: GNL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 605019..615593
location: region:605019-615593:1
so has part: feature:605019-615593:1:exon
subclass of: SO_0000010

100228570
type: Gene
SIO_000068: ncbigene

position:605019:1
position: 605019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:615593:1
position: 615593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:605019-615593:1:exon

GNL2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: GNL2
product: G protein nucleolar 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 2 long SRA reads, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 128 samples with support for all annotated introns
transcript id: XM_002198252.6
SIO_010081: GNL2
subclass of: SO_0000673
so part of: GNL2
location: join(605019..605606,605684..605768,606815..606909,607791..607930,609217..609401,609656..609722,610789..610947,611507..611620,611767..611895,612180..612284,612383..612541,612680..612796,613115..613548,614180..614259,614930..615030,615413..615593)
location: region:605019-615593:1
so has part: feature:605019-605606:1:exon
so has part: feature:605684-605768:1:exon
so has part: feature:606815-606909:1:exon
so has part: feature:607791-607930:1:exon
so has part: feature:609217-609401:1:exon
so has part: feature:609656-609722:1:exon
so has part: feature:610789-610947:1:exon
so has part: feature:611507-611620:1:exon
so has part: feature:611767-611895:1:exon
so has part: feature:612180-612284:1:exon
so has part: feature:612383-612541:1:exon
so has part: feature:612680-612796:1:exon
so has part: feature:613115-613548:1:exon
so has part: feature:614180-614259:1:exon
so has part: feature:614930-615030:1:exon
so has part: feature:615413-615593:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:605019-605606:1:exon

position:605606:1
position: 605606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:605684-605768:1:exon

position:605684:1
position: 605684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:605768:1
position: 605768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:606815-606909:1:exon

position:606815:1
position: 606815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:606909:1
position: 606909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:607791-607930:1:exon

position:607791:1
position: 607791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:607930:1
position: 607930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:609217-609401:1:exon

position:609217:1
position: 609217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:609401:1
position: 609401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:609656-609722:1:exon

position:609656:1
position: 609656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:609722:1
position: 609722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:610789-610947:1:exon

position:610789:1
position: 610789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:610947:1
position: 610947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:611507-611620:1:exon

position:611507:1
position: 611507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:611620:1
position: 611620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:611767-611895:1:exon

position:611767:1
position: 611767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:611895:1
position: 611895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:612180-612284:1:exon

position:612180:1
position: 612180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:612284:1
position: 612284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:612383-612541:1:exon

position:612383:1
position: 612383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:612541:1
position: 612541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:612680-612796:1:exon

position:612680:1
position: 612680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:612796:1
position: 612796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:613115-613548:1:exon

position:613115:1
position: 613115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:613548:1
position: 613548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:614180-614259:1:exon

position:614180:1
position: 614180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:614259:1
position: 614259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:614930-615030:1:exon

position:614930:1
position: 614930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:615030:1
position: 615030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:615413-615593:1:exon

position:615413:1
position: 615413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GNL2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: GNL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleolar GTP-binding protein 2
translation: MVKPRYKGRCSINPSRASTNPDRVGGEGGNNMRDRATIRRLNMYRQKERRNKRGKVIKPLQFQSTVAPGTVARVEPNIKWFGNTRVIKQSSLQKFQEDMETVMKDPYRVIMKQKKLPMSLFYDRIKPHTSRVHILDTETFETTFGPKSQRKRPTLSASDVQSLVENAEASSESYDQGKDRDLVTEDTGVRDEAQEEIFKKGQSKRIWGELYKVIDSSDVVVQVLDARDPIGTRSPHVESYLKKEKHWKHLIFVLNKCDLIPTWATKRWVAVLSQEYPTLAFHASLTNPFGKGAFIQLLRQFGKLHSDKKQISVGFIGYPNVGKSSVINTLRSKKVCSVAPIAGETKVWQYITLMRRIFLIDCPGVVYPSGDSETDIVLKGVVQVEKIKNPEDHIGAVLERAKAEYIRKTYKIDSWTDTEDFLEKLAARTGKLLKGGEPDLQTVSKMVLNDWQRGRIPFFVKPPNAEPGQPDPQPPVLEASVTCSQDNTEEKVSELVASGVEPAAEESNTNTEIRQLMSQVRQNFGRINVAPQFSEEDLVPVDVPGFDDTDNDSSGEEEEEEEKEENEQHQDPGEEELQVAAPAAQESSKAVLKALEDKIAKYKKFLDKAKAKRFSAIRIPKRLSDIVFAKSMEKAEEPKETEDRGSTEKKRKKKEEEESDDDDDQLGKQPRKKLTSKERRRAERQQRSKKVGVRYYETHNVKNKNKNKKKTGLEGQRSKQKKYKHKQ
SIO_010081: GNL2
subclass of: SO_0000673
so part of: GNL2
location: join(605543..605606,605684..605768,606815..606909,607791..607930,609217..609401,609656..609722,610789..610947,611507..611620,611767..611895,612180..612284,612383..612541,612680..612796,613115..613548,614180..614259,614930..615030,615413..615562)
location: region:605543-615562:1
so has part: feature:605543-605606:1:exon
so has part: feature:605684-605768:1:exon
so has part: feature:606815-606909:1:exon
so has part: feature:607791-607930:1:exon
so has part: feature:609217-609401:1:exon
so has part: feature:609656-609722:1:exon
so has part: feature:610789-610947:1:exon
so has part: feature:611507-611620:1:exon
so has part: feature:611767-611895:1:exon
so has part: feature:612180-612284:1:exon
so has part: feature:612383-612541:1:exon
so has part: feature:612680-612796:1:exon
so has part: feature:613115-613548:1:exon
so has part: feature:614180-614259:1:exon
so has part: feature:614930-615030:1:exon
so has part: feature:615413-615562:1:exon

XP_002198288.5
type: Protein
SIO_000068: ncbiprotein

position:605543:1
position: 605543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:615562:1
position: 615562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:605543-605606:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:605684-605768:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:606815-606909:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:607791-607930:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:609217-609401:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:609656-609722:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:610789-610947:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:611507-611620:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:611767-611895:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:612180-612284:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:612383-612541:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:612680-612796:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:613115-613548:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:614180-614259:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:614930-615030:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:615413-615562:1:exon

DNALI1
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: DNALI1
note: dynein axonemal light intermediate chain 1; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: complement(616323..620905)
location: region:616323-620905:-1
so has part: feature:616323-620905:-1:exon
subclass of: SO_0000010

100190300
type: Gene
SIO_000068: ncbigene

position:616323:-1
position: 616323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:620905:-1
position: 620905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:616323-620905:-1:exon

DNALI1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: DNALI1
product: dynein axonemal light intermediate chain 1
inference: similar to RNA sequence, mRNA (same species):RefSeq:NM_001245391.1
exception: annotated by transcript or proteomic data
note: The RefSeq transcript has 9 substitutions, 1 non-frameshifting indel compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001245391.1
SIO_010081: DNALI1
subclass of: SO_0000673
so part of: DNALI1
location: complement(join(616323..616665,617593..617757,619257..619435,620380..620549,620626..620705,620804..620905))
location: region:616323-620905:-1
so has part: feature:620804-620905:-1:exon
so has part: feature:620626-620705:-1:exon
so has part: feature:620380-620549:-1:exon
so has part: feature:619257-619435:-1:exon
so has part: feature:617593-617757:-1:exon
so has part: feature:616323-616665:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:620804-620905:-1:exon

position:620804:-1
position: 620804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:620626-620705:-1:exon

position:620626:-1
position: 620626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:620705:-1
position: 620705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:620380-620549:-1:exon

position:620380:-1
position: 620380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:620549:-1
position: 620549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:619257-619435:-1:exon

position:619257:-1
position: 619257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:619435:-1
position: 619435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:617593-617757:-1:exon

position:617593:-1
position: 617593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:617757:-1
position: 617757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:616323-616665:-1:exon

position:616665:-1
position: 616665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DNALI1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: DNALI1
inference: similar to AA sequence (same species):RefSeq:NP_001232320.1
exception: annotated by transcript or proteomic data
note: The RefSeq protein has 2 substitutions compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: axonemal dynein light intermediate polypeptide 1
translation: MAAPPESLLRYCPPVLLSRRGDTASAPGRAPRSPAGLSSAQQPQELLNAILPPREWEEAQKRWVQEVSAAPSTRRDVLQLQEQLDRQLQQRQARETGLCPVRRELYTQCFDELIRQTTVSCAERGLLLLRVRDELRLTLAAYQALYESSVAFGVRKALLAEQGKAHLEKRIAELEEEKEELEKQVSEEKAKCEAIERQETERREIEEKKHSEEVLFLKRTNQQLKAQLECIIAAKN
SIO_010081: DNALI1
subclass of: SO_0000673
so part of: DNALI1
location: complement(join(616630..616665,617593..617757,619257..619435,620380..620549,620626..620705,620804..620884))
location: region:616630-620884:-1
so has part: feature:620804-620884:-1:exon
so has part: feature:620626-620705:-1:exon
so has part: feature:620380-620549:-1:exon
so has part: feature:619257-619435:-1:exon
so has part: feature:617593-617757:-1:exon
so has part: feature:616630-616665:-1:exon

NP_001232320.1
type: Protein
SIO_000068: ncbiprotein

position:616630:-1
position: 616630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:620884:-1
position: 620884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:620804-620884:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:620626-620705:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:620380-620549:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:619257-619435:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:617593-617757:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:616630-616665:-1:exon

SNIP1
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: SNIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 621027..624514
location: region:621027-624514:1
so has part: feature:621027-624514:1:exon
subclass of: SO_0000010

115498234
type: Gene
SIO_000068: ncbigene

position:621027:1
position: 621027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:624514:1
position: 624514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:621027-624514:1:exon

SNIP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: SNIP1
product: Smad nuclear interacting protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 104 samples with support for all annotated introns
transcript id: XM_030290224.3
SIO_010081: SNIP1
subclass of: SO_0000673
so part of: SNIP1
location: join(621027..621184,621257..621359,621845..622413,623065..624514)
location: region:621027-624514:1
so has part: feature:621027-621184:1:exon
so has part: feature:621257-621359:1:exon
so has part: feature:621845-622413:1:exon
so has part: feature:623065-624514:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:621027-621184:1:exon

position:621184:1
position: 621184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:621257-621359:1:exon

position:621257:1
position: 621257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:621359:1
position: 621359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:621845-622413:1:exon

position:621845:1
position: 621845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:622413:1
position: 622413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:623065-624514:1:exon

position:623065:1
position: 623065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SNIP1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 59729
gene: SNIP1
product: Smad nuclear interacting protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 49 samples with support for all annotated introns
transcript id: XR_003963652.3
SIO_010081: SNIP1
so part of: SNIP1
location: join(621027..621184,621257..621359,621845..622413,623065..623458,623571..624514)
location: region:621027-624514:1
so has part: feature:621027-621184:1:exon
so has part: feature:621257-621359:1:exon
so has part: feature:621845-622413:1:exon
so has part: feature:623065-623458:1:exon
so has part: feature:623571-624514:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:621027-621184:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:621257-621359:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:621845-622413:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:623065-623458:1:exon

position:623458:1
position: 623458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:623571-624514:1:exon

position:623571:1
position: 623571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SNIP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: SNIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: smad nuclear-interacting protein 1
translation: MEAAEERRRERRRRREAAVVVKAERRSPRRSPSPPSEERRGPAGRGSRSPRRRSRSGRRSRSPRGRRSRSHSPHHGAVRVKQEREDHCRRGAEERKQRHPAEQEHRRERDRSGERHKEHADRRKNPGERLGGRSHEREAQTLREQQAERELHNERRREQRQSSEQSAEPWQGESKAKEKPAANKEKPSFELSGALLEDTNTFRGVVIKYSEPPEARIPKTRWRLYPFKNDEFLPVMYIHRQSAYLLGRHRRIADIPIDHPSCSKQHAVFQYRLVEYTRADGSVGRRVRPYIIDLGSGNGTFLNNQRIEPQRYYELKEKDVLKFGFSSREYVLLHESSDKSEANAKDDDEDEEKEEESDS
SIO_010081: SNIP1
subclass of: SO_0000673
so part of: SNIP1
location: join(621042..621184,621257..621359,621845..622413,623065..623329)
location: region:621042-623329:1
so has part: feature:621042-621184:1:exon
so has part: feature:621257-621359:1:exon
so has part: feature:621845-622413:1:exon
so has part: feature:623065-623329:1:exon

XP_030146084.3
type: Protein
SIO_000068: ncbiprotein

position:621042:1
position: 621042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:623329:1
position: 623329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:621042-621184:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:621257-621359:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:621845-622413:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:623065-623329:1:exon

MEAF6
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: MEAF6
note: MYST/Esa1 associated factor 6; Derived by automated computational analysis using gene prediction method: BestRefSeq,Gnomon.
so part of: sequence
location: 626437..633161
location: region:626437-633161:1
so has part: feature:626437-633161:1:exon
subclass of: SO_0000010

100190282
type: Gene
SIO_000068: ncbigene

position:626437:1
position: 626437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:633161:1
position: 633161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:626437-633161:1:exon

MEAF6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: MEAF6
product: MYST/Esa1 associated factor 6, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 9 ESTs, 10 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 114 samples with support for all annotated introns
transcript id: XM_030290185.3
SIO_010081: MEAF6
subclass of: SO_0000673
so part of: MEAF6
location: join(626437..626600,626712..626827,626903..626990,627635..627680,628191..628383,631897..631930,632391..633161)
location: region:626437-633161:1
so has part: feature:626437-626600:1:exon
so has part: feature:626712-626827:1:exon
so has part: feature:626903-626990:1:exon
so has part: feature:627635-627680:1:exon
so has part: feature:628191-628383:1:exon
so has part: feature:631897-631930:1:exon
so has part: feature:632391-633161:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:626437-626600:1:exon

position:626600:1
position: 626600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:626712-626827:1:exon

position:626712:1
position: 626712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:626827:1
position: 626827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:626903-626990:1:exon

position:626903:1
position: 626903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:626990:1
position: 626990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:627635-627680:1:exon

position:627635:1
position: 627635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:627680:1
position: 627680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:628191-628383:1:exon

position:628191:1
position: 628191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:628383:1
position: 628383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:631897-631930:1:exon

position:631897:1
position: 631897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:631930:1
position: 631930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:632391-633161:1:exon

position:632391:1
position: 632391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MEAF6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: MEAF6
product: MYST/Esa1 associated factor 6, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 82 samples with support for all annotated introns
transcript id: XM_030290186.3
SIO_010081: MEAF6
subclass of: SO_0000673
so part of: MEAF6
location: join(626467..626600,626712..626827,626903..626990,627635..627680,628191..628383,632391..633161)
location: region:626467-633161:1
so has part: feature:626467-626600:1:exon
so has part: feature:626712-626827:1:exon
so has part: feature:626903-626990:1:exon
so has part: feature:627635-627680:1:exon
so has part: feature:628191-628383:1:exon
so has part: feature:632391-633161:1:exon

position:626467:1
position: 626467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:626467-626600:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:626712-626827:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:626903-626990:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:627635-627680:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:628191-628383:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:632391-633161:1:exon

MEAF6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: MEAF6
product: MYST/Esa1 associated factor 6, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 92 samples with support for all annotated introns
transcript id: XM_041720679.1
SIO_010081: MEAF6
subclass of: SO_0000673
so part of: MEAF6
location: join(626467..626600,626712..626827,626930..626990,627635..627680,628191..628383,631108..631137,631897..631930,632391..633161)
location: region:626467-633161:1
so has part: feature:626467-626600:1:exon
so has part: feature:626712-626827:1:exon
so has part: feature:626930-626990:1:exon
so has part: feature:627635-627680:1:exon
so has part: feature:628191-628383:1:exon
so has part: feature:631108-631137:1:exon
so has part: feature:631897-631930:1:exon
so has part: feature:632391-633161:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:626467-626600:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:626712-626827:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:626930-626990:1:exon

position:626930:1
position: 626930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:627635-627680:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:628191-628383:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:631108-631137:1:exon

position:631108:1
position: 631108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:631137:1
position: 631137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:631897-631930:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:632391-633161:1:exon

MEAF6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: MEAF6
product: MYST/Esa1 associated factor 6, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 96 samples with support for all annotated introns
transcript id: XM_032752468.2
SIO_010081: MEAF6
subclass of: SO_0000673
so part of: MEAF6
location: join(626467..626600,626712..626827,626903..626990,627635..627680,628191..628383,631108..631137,631241..631274)
location: region:626467-631274:1
so has part: feature:626467-626600:1:exon
so has part: feature:626712-626827:1:exon
so has part: feature:626903-626990:1:exon
so has part: feature:627635-627680:1:exon
so has part: feature:628191-628383:1:exon
so has part: feature:631108-631137:1:exon
so has part: feature:631241-631274:1:exon

position:631274:1
position: 631274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:626467-626600:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:626712-626827:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:626903-626990:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:627635-627680:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:628191-628383:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:631108-631137:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:631241-631274:1:exon

position:631241:1
position: 631241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MEAF6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: MEAF6
product: MYST/Esa1 associated factor 6, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 140 samples with support for all annotated introns
transcript id: XM_041720680.1
SIO_010081: MEAF6
subclass of: SO_0000673
so part of: MEAF6
location: join(626467..626600,626712..626827,626903..626990,627635..627680,628191..628383,631241..631274)
location: region:626467-631274:1
so has part: feature:626467-626600:1:exon
so has part: feature:626712-626827:1:exon
so has part: feature:626903-626990:1:exon
so has part: feature:627635-627680:1:exon
so has part: feature:628191-628383:1:exon
so has part: feature:631241-631274:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:626467-626600:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:626712-626827:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:626903-626990:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:627635-627680:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:628191-628383:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:631241-631274:1:exon

MEAF6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: MEAF6
product: MYST/Esa1 associated factor 6, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 153 samples with support for all annotated introns
transcript id: XM_030290187.3
SIO_010081: MEAF6
subclass of: SO_0000673
so part of: MEAF6
location: join(626467..626600,626712..626827,626903..626990,627635..627680,628191..628383,629501..629959)
location: region:626467-629959:1
so has part: feature:626467-626600:1:exon
so has part: feature:626712-626827:1:exon
so has part: feature:626903-626990:1:exon
so has part: feature:627635-627680:1:exon
so has part: feature:628191-628383:1:exon
so has part: feature:629501-629959:1:exon

position:629959:1
position: 629959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:626467-626600:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:626712-626827:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:626903-626990:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:627635-627680:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:628191-628383:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:629501-629959:1:exon

position:629501:1
position: 629501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MEAF6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: MEAF6
product: MYST/Esa1 associated factor 6
inference: similar to RNA sequence, mRNA (same species):RefSeq:NM_001197177.1
exception: annotated by transcript or proteomic data
note: The RefSeq transcript has 5 substitutions, 1 non-frameshifting indel compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001197177.1
SIO_010081: MEAF6
subclass of: SO_0000673
so part of: MEAF6
location: join(626475..626600,626712..626827,626903..626990,627635..627680,628191..628383,631108..631137,631897..631930,632391..633161)
location: region:626475-633161:1
so has part: feature:626475-626600:1:exon
so has part: feature:626712-626827:1:exon
so has part: feature:626903-626990:1:exon
so has part: feature:627635-627680:1:exon
so has part: feature:628191-628383:1:exon
so has part: feature:631108-631137:1:exon
so has part: feature:631897-631930:1:exon
so has part: feature:632391-633161:1:exon

position:626475:1
position: 626475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:626475-626600:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:626712-626827:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:626903-626990:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:627635-627680:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:628191-628383:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:631108-631137:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:631897-631930:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:632391-633161:1:exon

MEAF6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: MEAF6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromatin modification-related protein MEAF6 isoform X4
translation: MAALHAKAGGPPQIPDTRRELAELVKRKQELAETLANLERQIYAFEGSYLEDTQMYGNIIRGWDRYLTNQKNSNSKNDRRNRKFKEAERLFSKSSVTSAAAVSALAGVQDQLIEKREPGSGTESDTSPDFHNQENEPNQEDAEELDGSVQGVKPQKAASSTSSGSHHSSHKKRKNKNRHRTTRAISADAPGI
SIO_010081: MEAF6
subclass of: SO_0000673
so part of: MEAF6
location: join(626505..626600,626712..626827,626903..626990,627635..627680,628191..628383,632391..632430)
location: region:626505-632430:1
so has part: feature:626505-626600:1:exon
so has part: feature:626712-626827:1:exon
so has part: feature:626903-626990:1:exon
so has part: feature:627635-627680:1:exon
so has part: feature:628191-628383:1:exon
so has part: feature:632391-632430:1:exon

XP_030146046.1
type: Protein
SIO_000068: ncbiprotein

position:626505:1
position: 626505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:632430:1
position: 632430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:626505-626600:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:626712-626827:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:626903-626990:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:627635-627680:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:628191-628383:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:632391-632430:1:exon

MEAF6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: MEAF6
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: chromatin modification-related protein MEAF6
translation: MAALHAKAGGPPQIPDTRRELAELVKRKQELAETLANLERQIYAFEGSYLEDTQMYGNIIRGWDRYLTNQKNSNSKNDRRNRKFKEAERLFSKSSVTSAAAVSALAGVQDQLIEKREPGSGTESDTSPDFHNQENEPNQEDAEELDGSVQGVKPQKAASSTSSGSHHSSHKKRKNKNRHSPSGMFDYDFEIDLKLNKKPRADY
SIO_010081: MEAF6
subclass of: SO_0000673
so part of: MEAF6
location: join(626505..626600,626712..626827,626903..626990,627635..627680,628191..628383,631108..631137,631897..631930,632391..632399)
location: region:626505-632399:1
so has part: feature:626505-626600:1:exon
so has part: feature:626712-626827:1:exon
so has part: feature:626903-626990:1:exon
so has part: feature:627635-627680:1:exon
so has part: feature:628191-628383:1:exon
so has part: feature:631108-631137:1:exon
so has part: feature:631897-631930:1:exon
so has part: feature:632391-632399:1:exon

NP_001184106.1
type: Protein
SIO_000068: ncbiprotein

position:632399:1
position: 632399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:626505-626600:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:626712-626827:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:626903-626990:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:627635-627680:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:628191-628383:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:631108-631137:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:631897-631930:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:632391-632399:1:exon

MEAF6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: MEAF6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromatin modification-related protein MEAF6 isoform X2
translation: MAALHAKAGGPPQIPDTRRELAELVKRKQELAETLANLERQIYAFEGSYLEDTQMYGNIIRGWDRYLTNQKNSNSKNDRRNRKFKEAERLFSKSSVTSAAAVSALAGVQDQLIEKREPGSGTESDTSPDFHNQENEPNQEDAEELDGSVQGVKPQKAASSTSSGSHHSSHKKRKNKNRHRIDLKLNKKPRADY
SIO_010081: MEAF6
subclass of: SO_0000673
so part of: MEAF6
location: join(626505..626600,626712..626827,626903..626990,627635..627680,628191..628383,631897..631930,632391..632399)
location: region:626505-632399:1
so has part: feature:626505-626600:1:exon
so has part: feature:626712-626827:1:exon
so has part: feature:626903-626990:1:exon
so has part: feature:627635-627680:1:exon
so has part: feature:628191-628383:1:exon
so has part: feature:631897-631930:1:exon
so has part: feature:632391-632399:1:exon

XP_030146045.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:626505-626600:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:626712-626827:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:626903-626990:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:627635-627680:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:628191-628383:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:631897-631930:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:632391-632399:1:exon

MEAF6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: MEAF6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromatin modification-related protein MEAF6 isoform X1
translation: MAALHAKAGGPPQIPDTRRELAELVKRKQELAETLANLERQIYAFEGSYLEDTQMYGNIIRGWDRYLTNQKNRKFKEAERLFSKSSVTSAAAVSALAGVQDQLIEKREPGSGTESDTSPDFHNQENEPNQEDAEELDGSVQGVKPQKAASSTSSGSHHSSHKKRKNKNRHSPSGMFDYDFEIDLKLNKKPRADY
SIO_010081: MEAF6
subclass of: SO_0000673
so part of: MEAF6
location: join(626505..626600,626712..626827,626930..626990,627635..627680,628191..628383,631108..631137,631897..631930,632391..632399)
location: region:626505-632399:1
so has part: feature:626505-626600:1:exon
so has part: feature:626712-626827:1:exon
so has part: feature:626930-626990:1:exon
so has part: feature:627635-627680:1:exon
so has part: feature:628191-628383:1:exon
so has part: feature:631108-631137:1:exon
so has part: feature:631897-631930:1:exon
so has part: feature:632391-632399:1:exon

XP_041576613.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:626505-626600:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:626712-626827:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:626930-626990:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:627635-627680:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:628191-628383:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:631108-631137:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:631897-631930:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:632391-632399:1:exon

MEAF6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: MEAF6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromatin modification-related protein MEAF6 isoform X3
translation: MAALHAKAGGPPQIPDTRRELAELVKRKQELAETLANLERQIYAFEGSYLEDTQMYGNIIRGWDRYLTNQKNSNSKNDRRNRKFKEAERLFSKSSVTSAAAVSALAGVQDQLIEKREPGSGTESDTSPDFHNQENEPNQEDAEELDGSVQGVKPQKAASSTSSGSHHSSHKKRKNKNRHSPSGMFDYDFEYVY
SIO_010081: MEAF6
subclass of: SO_0000673
so part of: MEAF6
location: join(626505..626600,626712..626827,626903..626990,627635..627680,628191..628383,631108..631137,631241..631253)
location: region:626505-631253:1
so has part: feature:626505-626600:1:exon
so has part: feature:626712-626827:1:exon
so has part: feature:626903-626990:1:exon
so has part: feature:627635-627680:1:exon
so has part: feature:628191-628383:1:exon
so has part: feature:631108-631137:1:exon
so has part: feature:631241-631253:1:exon

XP_032608359.1
type: Protein
SIO_000068: ncbiprotein

position:631253:1
position: 631253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:626505-626600:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:626712-626827:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:626903-626990:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:627635-627680:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:628191-628383:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:631108-631137:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:631241-631253:1:exon

MEAF6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: MEAF6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromatin modification-related protein MEAF6 isoform X6
translation: MAALHAKAGGPPQIPDTRRELAELVKRKQELAETLANLERQIYAFEGSYLEDTQMYGNIIRGWDRYLTNQKNSNSKNDRRNRKFKEAERLFSKSSVTSAAAVSALAGVQDQLIEKREPGSGTESDTSPDFHNQENEPNQEDAEELDGSVQGVKPQKAASSTSSGSHHSSHKKRKNKNRHRYVY
SIO_010081: MEAF6
subclass of: SO_0000673
so part of: MEAF6
location: join(626505..626600,626712..626827,626903..626990,627635..627680,628191..628383,631241..631253)
location: region:626505-631253:1
so has part: feature:626505-626600:1:exon
so has part: feature:626712-626827:1:exon
so has part: feature:626903-626990:1:exon
so has part: feature:627635-627680:1:exon
so has part: feature:628191-628383:1:exon
so has part: feature:631241-631253:1:exon

XP_041576614.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:626505-626600:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:626712-626827:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:626903-626990:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:627635-627680:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:628191-628383:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:631241-631253:1:exon

MEAF6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: MEAF6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromatin modification-related protein MEAF6 isoform X5
translation: MAALHAKAGGPPQIPDTRRELAELVKRKQELAETLANLERQIYAFEGSYLEDTQMYGNIIRGWDRYLTNQKNSNSKNDRRNRKFKEAERLFSKSSVTSAAAVSALAGVQDQLIEKREPGSGTESDTSPDFHNQENEPNQEDAEELDGSVQGVKPQKAASSTSSGSHHSSHKKRKNKNRHRYLEEVQE
SIO_010081: MEAF6
subclass of: SO_0000673
so part of: MEAF6
location: join(626505..626600,626712..626827,626903..626990,627635..627680,628191..628383,629501..629525)
location: region:626505-629525:1
so has part: feature:626505-626600:1:exon
so has part: feature:626712-626827:1:exon
so has part: feature:626903-626990:1:exon
so has part: feature:627635-627680:1:exon
so has part: feature:628191-628383:1:exon
so has part: feature:629501-629525:1:exon

XP_030146047.1
type: Protein
SIO_000068: ncbiprotein

position:629525:1
position: 629525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:626505-626600:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:626712-626827:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:626903-626990:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:627635-627680:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:628191-628383:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:629501-629525:1:exon

ZC3H12A
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: ZC3H12A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(640106..648396)
location: region:640106-648396:-1
so has part: feature:640106-648396:-1:exon
subclass of: SO_0000010

100219944
type: Gene
SIO_000068: ncbigene

position:640106:-1
position: 640106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:648396:-1
position: 648396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:640106-648396:-1:exon

ZC3H12A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: ZC3H12A
product: zinc finger CCCH-type containing 12A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_030290398.3
SIO_010081: ZC3H12A
subclass of: SO_0000673
so part of: ZC3H12A
location: complement(join(640106..642845,642950..643056,643989..644223,644721..644860,647781..648215,648355..648396))
location: region:640106-648396:-1
so has part: feature:648355-648396:-1:exon
so has part: feature:647781-648215:-1:exon
so has part: feature:644721-644860:-1:exon
so has part: feature:643989-644223:-1:exon
so has part: feature:642950-643056:-1:exon
so has part: feature:640106-642845:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:648355-648396:-1:exon

position:648355:-1
position: 648355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:647781-648215:-1:exon

position:647781:-1
position: 647781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:648215:-1
position: 648215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:644721-644860:-1:exon

position:644721:-1
position: 644721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:644860:-1
position: 644860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:643989-644223:-1:exon

position:643989:-1
position: 643989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:644223:-1
position: 644223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:642950-643056:-1:exon

position:642950:-1
position: 642950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:643056:-1
position: 643056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:640106-642845:-1:exon

position:642845:-1
position: 642845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZC3H12A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: ZC3H12A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: endoribonuclease ZC3H12A
translation: MSAGSLAPGWPEALPPARPAAGMSRSPEGPADGPELQLKVDFFRKLGYSSEEIRGVLQKLGLGADTNTVLGELVKHGPAERDGPEAPPEPAEAPLVPRGGAGNKSPAPGPEEAESDNLKPIVIDGSNVAMSHGNKEVFSCRGILLAVQWFWDRGHKDITVFVPSWRKEQPRPDVLITDQYILRDLEKKKILVFTPSRRVGGKRVVCYDDRFIVKLAHESDGIIVSNDTYRDLQGERPEWKKFIEERLLMYSFVNDKFMPPDDPLGRHGPSLDNFLRKKPVVPEHKKQQCPYGKKCTYGIKCKFYHPERINQPQRSLADELRANARLSPTRSTSAKEEKKGKRGSQAELLCSVPTESDKSSLQKVSAERKSLAHKAKPSDVVLQAKGCVSGSVSPDRYQQPPMDSLSYISQEHLDSGIGSLENQLSDMWPHRCTSHCDRSHAEQVPVCTCGGQRPVYPHSPSLEQNGLVSYNHGSHKSPSPGAGFLQYSPEPPCSGAARSFSGYGVPVPAGAAGQYSLPGEFGAALPRSREFWSEPYPLPQVRSPGVHRASGPWAAEEQFAEERARVHVRLCSIFHPHLVDAVMGRFPRLLDPQRLAAEILTYKAQNPGV
SIO_010081: ZC3H12A
subclass of: SO_0000673
so part of: ZC3H12A
location: complement(join(641890..642845,642950..643056,643989..644223,644721..644860,647781..648172))
location: region:641890-648172:-1
so has part: feature:647781-648172:-1:exon
so has part: feature:644721-644860:-1:exon
so has part: feature:643989-644223:-1:exon
so has part: feature:642950-643056:-1:exon
so has part: feature:641890-642845:-1:exon

XP_030146258.3
type: Protein
SIO_000068: ncbiprotein

position:641890:-1
position: 641890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:648172:-1
position: 648172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:647781-648172:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:644721-644860:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:643989-644223:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:642950-643056:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:641890-642845:-1:exon

LOC115498258
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC115498258
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 648549..652307
location: region:648549-652307:1
so has part: feature:648549-652307:1:exon
subclass of: SO_0000011

115498258
type: Gene
SIO_000068: ncbigene

position:648549:1
position: 648549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:652307:1
position: 652307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:648549-652307:1:exon

LOC115498258
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC115498258
product: uncharacterized LOC115498258
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XR_004369718.2
SIO_010081: LOC115498258
subclass of: SO_0000673
so part of: LOC115498258
location: join(648549..648756,650894..652307)
location: region:648549-652307:1
so has part: feature:648549-648756:1:exon
so has part: feature:650894-652307:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:648549-648756:1:exon

position:648756:1
position: 648756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:650894-652307:1:exon

position:650894:1
position: 650894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GRIK3
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: GRIK3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 743781..840648
location: region:743781-840648:1
so has part: feature:743781-840648:1:exon
subclass of: SO_0000010

100232439
type: Gene
SIO_000068: ncbigene

position:743781:1
position: 743781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:840648:1
position: 840648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:743781-840648:1:exon

GRIK3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: GRIK3
product: glutamate ionotropic receptor kainate type subunit 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 ESTs, 101 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 71 samples with support for all annotated introns
transcript id: XM_030290259.3
SIO_010081: GRIK3
subclass of: SO_0000673
so part of: GRIK3
location: join(743781..744026,793046..793222,793946..794203,795488..795669,799809..799862,803869..804042,805784..805927,807853..807960,811614..811727,814746..814949,820780..821003,825710..825828,828080..828297,834612..834834,835048..835298,836648..840648)
location: region:743781-840648:1
so has part: feature:743781-744026:1:exon
so has part: feature:793046-793222:1:exon
so has part: feature:793946-794203:1:exon
so has part: feature:795488-795669:1:exon
so has part: feature:799809-799862:1:exon
so has part: feature:803869-804042:1:exon
so has part: feature:805784-805927:1:exon
so has part: feature:807853-807960:1:exon
so has part: feature:811614-811727:1:exon
so has part: feature:814746-814949:1:exon
so has part: feature:820780-821003:1:exon
so has part: feature:825710-825828:1:exon
so has part: feature:828080-828297:1:exon
so has part: feature:834612-834834:1:exon
so has part: feature:835048-835298:1:exon
so has part: feature:836648-840648:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:743781-744026:1:exon

position:744026:1
position: 744026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:793046-793222:1:exon

position:793046:1
position: 793046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:793222:1
position: 793222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:793946-794203:1:exon

position:793946:1
position: 793946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:794203:1
position: 794203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:795488-795669:1:exon

position:795488:1
position: 795488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:795669:1
position: 795669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:799809-799862:1:exon

position:799809:1
position: 799809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:799862:1
position: 799862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:803869-804042:1:exon

position:803869:1
position: 803869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:804042:1
position: 804042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:805784-805927:1:exon

position:805784:1
position: 805784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:805927:1
position: 805927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:807853-807960:1:exon

position:807853:1
position: 807853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:807960:1
position: 807960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:811614-811727:1:exon

position:811614:1
position: 811614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:811727:1
position: 811727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:814746-814949:1:exon

position:814746:1
position: 814746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:814949:1
position: 814949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:820780-821003:1:exon

position:820780:1
position: 820780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:821003:1
position: 821003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:825710-825828:1:exon

position:825710:1
position: 825710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:825828:1
position: 825828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:828080-828297:1:exon

position:828080:1
position: 828080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:828297:1
position: 828297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:834612-834834:1:exon

position:834612:1
position: 834612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:834834:1
position: 834834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:835048-835298:1:exon

position:835048:1
position: 835048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:835298:1
position: 835298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:836648-840648:1:exon

position:836648:1
position: 836648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GRIK3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: GRIK3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glutamate receptor ionotropic, kainate 3
translation: MPHLWPALRRVLLEYWAALLVGGFWGQSSHGMPHVIRIGGIFEYADGPNTQVMSAEEQAFRFSANIINRNRTLLPNTTLTYDIQRIHFHDSFEATKKACDQLALGVVAIFGPSQGSCTNAVQSICNALEVPHIQLRWKHHPLDNKDTFYVNLYPDYASLSHAILDLVQYLKWRSATVVYDDSTGLIRLQELIMAPSRYNIRLKIRQLPLDTDDARPLLKEMKRGREFRIIFDCSHLMAAQILKQAMAMGMMTEYYHFIFTTLDLYALDLEPYRYSGVNLTGFRILNVENPHVSSIIEKWSMERLQSAPKAELGLLDGVMMTDAALLYDAVHVVSVCYQRAPQMTVNSLQCHRHKAWRFGGRFMNFIKEAQWEGLTGRIVFNKTSGLRTDFDLDIISLKEDGLEKVGAWSPSDGLNITEISKGRGPNVTDSLSNRSLIVTTVLEEPFVMFRKSDTALFGNDRFEGYCIDLLKELAIILGFSYEIRLVEDGKYGAQDEKGQWNGMIKELIDHKADLAVAPLTITHVREKAIDFSKPFMTLGVSILYRKPNGTNPSVFSFLNPLSPDIWMYILLAYLGVSCVLFVIARFSPYEWYDAHPCNPGSDIVENNFTLLNSFWFGMGALMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVKDGATMTFFKKSKISTFEKMWAFMSSKPTALVKNNEEGIQRTLTADYALLMESTTIEYITQRNCNLTQIGGLIDTKGYGIGTPMGSPYRDKITIAILQLQEEDKLHVMKEKWWRGNGCPEDENKEASALGIQNIGGIFIVLAGGLVLSVFVAMVEFIYKLRKTAEREQRSFCSAMADEIRLSLTCQRRVKHKPQAPVMVKTDAVINMHTFNDRRLTGKDNMTCNTGLAPVFP
SIO_010081: GRIK3
subclass of: SO_0000673
so part of: GRIK3
location: join(743912..744026,793046..793222,793946..794203,795488..795669,799809..799862,803869..804042,805784..805927,807853..807960,811614..811727,814746..814949,820780..821003,825710..825828,828080..828297,834612..834834,835048..835298,836648..836842)
location: region:743912-836842:1
so has part: feature:743912-744026:1:exon
so has part: feature:793046-793222:1:exon
so has part: feature:793946-794203:1:exon
so has part: feature:795488-795669:1:exon
so has part: feature:799809-799862:1:exon
so has part: feature:803869-804042:1:exon
so has part: feature:805784-805927:1:exon
so has part: feature:807853-807960:1:exon
so has part: feature:811614-811727:1:exon
so has part: feature:814746-814949:1:exon
so has part: feature:820780-821003:1:exon
so has part: feature:825710-825828:1:exon
so has part: feature:828080-828297:1:exon
so has part: feature:834612-834834:1:exon
so has part: feature:835048-835298:1:exon
so has part: feature:836648-836842:1:exon

XP_030146119.3
type: Protein
SIO_000068: ncbiprotein

position:743912:1
position: 743912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:836842:1
position: 836842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:743912-744026:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:793046-793222:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:793946-794203:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:795488-795669:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:799809-799862:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:803869-804042:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:805784-805927:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:807853-807960:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:811614-811727:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:814746-814949:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:820780-821003:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:825710-825828:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:828080-828297:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:834612-834834:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:835048-835298:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:836648-836842:1:exon

LOC121471039
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121471039
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 807969..810551
location: region:807969-810551:1
so has part: feature:807969-810551:1:exon
subclass of: SO_0000011

121471039
type: Gene
SIO_000068: ncbigene

position:807969:1
position: 807969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:810551:1
position: 810551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:807969-810551:1:exon

LOC121471039
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC121471039
product: uncharacterized LOC121471039
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XR_005982416.1
SIO_010081: LOC121471039
subclass of: SO_0000673
so part of: LOC121471039
location: join(807969..809010,809053..810551)
location: region:807969-810551:1
so has part: feature:807969-809010:1:exon
so has part: feature:809053-810551:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:807969-809010:1:exon

position:809010:1
position: 809010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:809053-810551:1:exon

position:809053:1
position: 809053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116809261
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC116809261
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(884270..889871)
location: region:884270-889871:-1
so has part: feature:884270-889871:-1:exon
subclass of: SO_0000011

116809261
type: Gene
SIO_000068: ncbigene

position:884270:-1
position: 884270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:889871:-1
position: 889871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:884270-889871:-1:exon

LOC116809261
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC116809261
product: uncharacterized LOC116809261
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004369733.2
SIO_010081: LOC116809261
subclass of: SO_0000673
so part of: LOC116809261
location: complement(join(884270..884615,886494..886627,889786..889871))
location: region:884270-889871:-1
so has part: feature:889786-889871:-1:exon
so has part: feature:886494-886627:-1:exon
so has part: feature:884270-884615:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:889786-889871:-1:exon

position:889786:-1
position: 889786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:886494-886627:-1:exon

position:886494:-1
position: 886494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:886627:-1
position: 886627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:884270-884615:-1:exon

position:884615:-1
position: 884615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CSF3R
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: CSF3R
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 981906..988568
location: region:981906-988568:1
so has part: feature:981906-988568:1:exon
subclass of: SO_0000010

100229496
type: Gene
SIO_000068: ncbigene

position:981906:1
position: 981906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:988568:1
position: 988568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:981906-988568:1:exon

CSF3R
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: CSF3R
product: colony stimulating factor 3 receptor, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_041720779.1
SIO_010081: CSF3R
subclass of: SO_0000673
so part of: CSF3R
location: join(981906..982059,982817..982912,983189..983488,983574..983697,983771..983940,984625..984779,984916..985081,985679..985761,985833..986046,986170..986358,986569..986670,986936..987082,987298..987438,987645..987655,987785..987866,988049..988143,988239..988568)
location: region:981906-988568:1
so has part: feature:981906-982059:1:exon
so has part: feature:982817-982912:1:exon
so has part: feature:983189-983488:1:exon
so has part: feature:983574-983697:1:exon
so has part: feature:983771-983940:1:exon
so has part: feature:984625-984779:1:exon
so has part: feature:984916-985081:1:exon
so has part: feature:985679-985761:1:exon
so has part: feature:985833-986046:1:exon
so has part: feature:986170-986358:1:exon
so has part: feature:986569-986670:1:exon
so has part: feature:986936-987082:1:exon
so has part: feature:987298-987438:1:exon
so has part: feature:987645-987655:1:exon
so has part: feature:987785-987866:1:exon
so has part: feature:988049-988143:1:exon
so has part: feature:988239-988568:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:981906-982059:1:exon

position:982059:1
position: 982059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:982817-982912:1:exon

position:982817:1
position: 982817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:982912:1
position: 982912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:983189-983488:1:exon

position:983189:1
position: 983189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:983488:1
position: 983488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:983574-983697:1:exon

position:983574:1
position: 983574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:983697:1
position: 983697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:983771-983940:1:exon

position:983771:1
position: 983771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:983940:1
position: 983940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:984625-984779:1:exon

position:984625:1
position: 984625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:984779:1
position: 984779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:984916-985081:1:exon

position:984916:1
position: 984916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:985081:1
position: 985081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:985679-985761:1:exon

position:985679:1
position: 985679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:985761:1
position: 985761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:985833-986046:1:exon

position:985833:1
position: 985833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:986046:1
position: 986046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:986170-986358:1:exon

position:986170:1
position: 986170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:986358:1
position: 986358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:986569-986670:1:exon

position:986569:1
position: 986569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:986670:1
position: 986670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:986936-987082:1:exon

position:986936:1
position: 986936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:987082:1
position: 987082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:987298-987438:1:exon

position:987298:1
position: 987298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:987438:1
position: 987438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:987645-987655:1:exon

position:987645:1
position: 987645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:987655:1
position: 987655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:987785-987866:1:exon

position:987785:1
position: 987785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:987866:1
position: 987866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:988049-988143:1:exon

position:988049:1
position: 988049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:988143:1
position: 988143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:988239-988568:1:exon

position:988239:1
position: 988239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CSF3R
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: CSF3R
product: colony stimulating factor 3 receptor, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_041720777.1
SIO_010081: CSF3R
subclass of: SO_0000673
so part of: CSF3R
location: join(981911..982059,982817..982912,983189..983488,983574..983697,983771..983940,984625..984779,984916..985081,985679..985761,985833..986046,986170..986358,986569..986670,986936..987082,987298..987438,987565..987655,987785..987866,988049..988568)
location: region:981911-988568:1
so has part: feature:981911-982059:1:exon
so has part: feature:982817-982912:1:exon
so has part: feature:983189-983488:1:exon
so has part: feature:983574-983697:1:exon
so has part: feature:983771-983940:1:exon
so has part: feature:984625-984779:1:exon
so has part: feature:984916-985081:1:exon
so has part: feature:985679-985761:1:exon
so has part: feature:985833-986046:1:exon
so has part: feature:986170-986358:1:exon
so has part: feature:986569-986670:1:exon
so has part: feature:986936-987082:1:exon
so has part: feature:987298-987438:1:exon
so has part: feature:987565-987655:1:exon
so has part: feature:987785-987866:1:exon
so has part: feature:988049-988568:1:exon

position:981911:1
position: 981911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:981911-982059:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:982817-982912:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:983189-983488:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:983574-983697:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:983771-983940:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:984625-984779:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:984916-985081:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:985679-985761:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:985833-986046:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:986170-986358:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:986569-986670:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:986936-987082:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:987298-987438:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:987565-987655:1:exon

position:987565:1
position: 987565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:987785-987866:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:988049-988568:1:exon

CSF3R
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: CSF3R
product: colony stimulating factor 3 receptor, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_041720778.1
SIO_010081: CSF3R
subclass of: SO_0000673
so part of: CSF3R
location: join(981911..982059,982817..982912,983189..983488,983574..983697,983771..983940,984625..984779,984916..985075,985679..985761,985833..986046,986170..986358,986569..986670,986936..987082,987298..987438,987565..987655,987785..987866,988049..988568)
location: region:981911-988568:1
so has part: feature:981911-982059:1:exon
so has part: feature:982817-982912:1:exon
so has part: feature:983189-983488:1:exon
so has part: feature:983574-983697:1:exon
so has part: feature:983771-983940:1:exon
so has part: feature:984625-984779:1:exon
so has part: feature:984916-985075:1:exon
so has part: feature:985679-985761:1:exon
so has part: feature:985833-986046:1:exon
so has part: feature:986170-986358:1:exon
so has part: feature:986569-986670:1:exon
so has part: feature:986936-987082:1:exon
so has part: feature:987298-987438:1:exon
so has part: feature:987565-987655:1:exon
so has part: feature:987785-987866:1:exon
so has part: feature:988049-988568:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:981911-982059:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:982817-982912:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:983189-983488:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:983574-983697:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:983771-983940:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:984625-984779:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:984916-985075:1:exon

position:985075:1
position: 985075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:985679-985761:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:985833-986046:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:986170-986358:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:986569-986670:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:986936-987082:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:987298-987438:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:987565-987655:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:987785-987866:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:988049-988568:1:exon

CSF3R
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: CSF3R
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: granulocyte colony-stimulating factor receptor isoform X3
translation: MARRGAGTPFLRQLSLLLLLHLGGTLGCASVAVSPRVVPLGSAVTASCTIQRELCHGLEQGKVRISWMLDNKLVAGSQHQGPGGTEVSNLTLPRFNLTQARLFCCVEWNGTKQRVGVAEIRAGYPPAKPLNLSCVLNLSDYGLTCRWEQGTNSHLPTSVVLKCTGSGAQAVTGCTPRGGHSHCTVPRQLLQLYRQMEIWVSATNALGTAESERLCIDPMDVAKLDPPTLQSIQSIPFQTDCIALAWDVAWGTEHMELQCELRYRAPEDSAWALVTGIIGQAGSAQRCGFLFGTQYCFQMRCRRSSATALASWSEWSPVRNYTTHEKGESPAGKLDAWWGARPAGPGGRLEVQLRWKAPRQREANGRVLGYRVTLSPRRRGRDPPTLCNTTRTQCNFSVPAATGRVYLSAYNAAGEAAPTEVTLLERKGQPLAGLRAVPGGERSLWVHWEAPPAPVSAYVLEWQRVTAEPGHCSACWQMERDGTATRALIQDGIEPFQRYNISLYPLYEGTVGVPVHTTAYSQQKAPSHAPKLHLKRISKSEAELCWEPLPVEVQNGFITSYTIFWASSITSMASATVTPSLSSFAIRGLKPSTLYKVHIMASTAAGSTNGTSLTLVTTALEERADEGAALAQRPRPRQQQPGQVGAGSGAAGAAPGPGRQGARPRRHLHGDRAGRGRGEGTGEGTGGSGCSPSPLPAPTRTCEAAATAAEGIGGSWRSPPPPSRCCRGSASAATRSCTSAGRTSAG
SIO_010081: CSF3R
subclass of: SO_0000673
so part of: CSF3R
location: join(982843..982912,983189..983488,983574..983697,983771..983940,984625..984779,984916..985081,985679..985761,985833..986046,986170..986358,986569..986670,986936..987082,987298..987438,987645..987655,987785..987866,988049..988143,988239..988430)
location: region:982843-988430:1
so has part: feature:982843-982912:1:exon
so has part: feature:983189-983488:1:exon
so has part: feature:983574-983697:1:exon
so has part: feature:983771-983940:1:exon
so has part: feature:984625-984779:1:exon
so has part: feature:984916-985081:1:exon
so has part: feature:985679-985761:1:exon
so has part: feature:985833-986046:1:exon
so has part: feature:986170-986358:1:exon
so has part: feature:986569-986670:1:exon
so has part: feature:986936-987082:1:exon
so has part: feature:987298-987438:1:exon
so has part: feature:987645-987655:1:exon
so has part: feature:987785-987866:1:exon
so has part: feature:988049-988143:1:exon
so has part: feature:988239-988430:1:exon

XP_041576713.1
type: Protein
SIO_000068: ncbiprotein

position:982843:1
position: 982843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:988430:1
position: 988430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:982843-982912:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:983189-983488:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:983574-983697:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:983771-983940:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:984625-984779:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:984916-985081:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:985679-985761:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:985833-986046:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:986170-986358:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:986569-986670:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:986936-987082:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:987298-987438:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:987645-987655:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:987785-987866:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:988049-988143:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:988239-988430:1:exon

CSF3R
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: CSF3R
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: granulocyte colony-stimulating factor receptor isoform X1
translation: MARRGAGTPFLRQLSLLLLLHLGGTLGCASVAVSPRVVPLGSAVTASCTIQRELCHGLEQGKVRISWMLDNKLVAGSQHQGPGGTEVSNLTLPRFNLTQARLFCCVEWNGTKQRVGVAEIRAGYPPAKPLNLSCVLNLSDYGLTCRWEQGTNSHLPTSVVLKCTGSGAQAVTGCTPRGGHSHCTVPRQLLQLYRQMEIWVSATNALGTAESERLCIDPMDVAKLDPPTLQSIQSIPFQTDCIALAWDVAWGTEHMELQCELRYRAPEDSAWALVTGIIGQAGSAQRCGFLFGTQYCFQMRCRRSSATALASWSEWSPVRNYTTHEKGESPAGKLDAWWGARPAGPGGRLEVQLRWKAPRQREANGRVLGYRVTLSPRRRGRDPPTLCNTTRTQCNFSVPAATGRVYLSAYNAAGEAAPTEVTLLERKGQPLAGLRAVPGGERSLWVHWEAPPAPVSAYVLEWQRVTAEPGHCSACWQMERDGTATRALIQDGIEPFQRYNISLYPLYEGTVGVPVHTTAYSQQKAPSHAPKLHLKRISKSEAELCWEPLPVEVQNGFITSYTIFWASSITSMASATVTPSLSSFAIRGLKPSTLYKVHIMASTAAGSTNGTSLTLVTTALDDTEIQFLFLSLGLVFVGLMVLLICFQKNERMKEQLWPSVPDPANSSLGKWVPAAAPQEPLQVPAAREPGPAAISTVTVLEGDAGKEPGKEPGKEPPGTPRPYVRQEGPGEPVQYARVGPAGYRGQRLLPEPAPRSYENLRGRGDGGGGDWGFLEEPPATFPLLQGLRIGGNEELHECRAD
SIO_010081: CSF3R
subclass of: SO_0000673
so part of: CSF3R
location: join(982843..982912,983189..983488,983574..983697,983771..983940,984625..984779,984916..985081,985679..985761,985833..986046,986170..986358,986569..986670,986936..987082,987298..987438,987565..987655,987785..987866,988049..988420)
location: region:982843-988420:1
so has part: feature:982843-982912:1:exon
so has part: feature:983189-983488:1:exon
so has part: feature:983574-983697:1:exon
so has part: feature:983771-983940:1:exon
so has part: feature:984625-984779:1:exon
so has part: feature:984916-985081:1:exon
so has part: feature:985679-985761:1:exon
so has part: feature:985833-986046:1:exon
so has part: feature:986170-986358:1:exon
so has part: feature:986569-986670:1:exon
so has part: feature:986936-987082:1:exon
so has part: feature:987298-987438:1:exon
so has part: feature:987565-987655:1:exon
so has part: feature:987785-987866:1:exon
so has part: feature:988049-988420:1:exon

XP_041576711.1
type: Protein
SIO_000068: ncbiprotein

position:988420:1
position: 988420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:982843-982912:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:983189-983488:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:983574-983697:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:983771-983940:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:984625-984779:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:984916-985081:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:985679-985761:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:985833-986046:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:986170-986358:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:986569-986670:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:986936-987082:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:987298-987438:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:987565-987655:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:987785-987866:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:988049-988420:1:exon

CSF3R
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: CSF3R
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: granulocyte colony-stimulating factor receptor isoform X2
translation: MARRGAGTPFLRQLSLLLLLHLGGTLGCASVAVSPRVVPLGSAVTASCTIQRELCHGLEQGKVRISWMLDNKLVAGSQHQGPGGTEVSNLTLPRFNLTQARLFCCVEWNGTKQRVGVAEIRAGYPPAKPLNLSCVLNLSDYGLTCRWEQGTNSHLPTSVVLKCTGSGAQAVTGCTPRGGHSHCTVPRQLLQLYRQMEIWVSATNALGTAESERLCIDPMDVAKLDPPTLQSIQSIPFQTDCIALAWDVAWGTEHMELQCELRYRAPEDSAWALVTGIIGQAGSAQRCGFLFGTQYCFQMRCRRSSATALASWSEWSPVRNYTTHEKAPAGKLDAWWGARPAGPGGRLEVQLRWKAPRQREANGRVLGYRVTLSPRRRGRDPPTLCNTTRTQCNFSVPAATGRVYLSAYNAAGEAAPTEVTLLERKGQPLAGLRAVPGGERSLWVHWEAPPAPVSAYVLEWQRVTAEPGHCSACWQMERDGTATRALIQDGIEPFQRYNISLYPLYEGTVGVPVHTTAYSQQKAPSHAPKLHLKRISKSEAELCWEPLPVEVQNGFITSYTIFWASSITSMASATVTPSLSSFAIRGLKPSTLYKVHIMASTAAGSTNGTSLTLVTTALDDTEIQFLFLSLGLVFVGLMVLLICFQKNERMKEQLWPSVPDPANSSLGKWVPAAAPQEPLQVPAAREPGPAAISTVTVLEGDAGKEPGKEPGKEPPGTPRPYVRQEGPGEPVQYARVGPAGYRGQRLLPEPAPRSYENLRGRGDGGGGDWGFLEEPPATFPLLQGLRIGGNEELHECRAD
SIO_010081: CSF3R
subclass of: SO_0000673
so part of: CSF3R
location: join(982843..982912,983189..983488,983574..983697,983771..983940,984625..984779,984916..985075,985679..985761,985833..986046,986170..986358,986569..986670,986936..987082,987298..987438,987565..987655,987785..987866,988049..988420)
location: region:982843-988420:1
so has part: feature:982843-982912:1:exon
so has part: feature:983189-983488:1:exon
so has part: feature:983574-983697:1:exon
so has part: feature:983771-983940:1:exon
so has part: feature:984625-984779:1:exon
so has part: feature:984916-985075:1:exon
so has part: feature:985679-985761:1:exon
so has part: feature:985833-986046:1:exon
so has part: feature:986170-986358:1:exon
so has part: feature:986569-986670:1:exon
so has part: feature:986936-987082:1:exon
so has part: feature:987298-987438:1:exon
so has part: feature:987565-987655:1:exon
so has part: feature:987785-987866:1:exon
so has part: feature:988049-988420:1:exon

XP_041576712.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:982843-982912:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:983189-983488:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:983574-983697:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:983771-983940:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:984625-984779:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:984916-985075:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:985679-985761:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:985833-986046:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:986170-986358:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:986569-986670:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:986936-987082:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:987298-987438:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:987565-987655:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:987785-987866:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:988049-988420:1:exon

MRPS15
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: MRPS15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 989078..996831
location: region:989078-996831:1
so has part: feature:989078-996831:1:exon
subclass of: SO_0000010

105758807
type: Gene
SIO_000068: ncbigene

position:989078:1
position: 989078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:996831:1
position: 996831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:989078-996831:1:exon

MRPS15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: MRPS15
product: mitochondrial ribosomal protein S15
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 long SRA reads, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 164 samples with support for all annotated introns
transcript id: XM_030290407.3
SIO_010081: MRPS15
subclass of: SO_0000673
so part of: MRPS15
location: join(989078..989223,990608..990670,991259..991334,992064..992112,992642..992726,993936..993994,995292..995483,996648..996831)
location: region:989078-996831:1
so has part: feature:989078-989223:1:exon
so has part: feature:990608-990670:1:exon
so has part: feature:991259-991334:1:exon
so has part: feature:992064-992112:1:exon
so has part: feature:992642-992726:1:exon
so has part: feature:993936-993994:1:exon
so has part: feature:995292-995483:1:exon
so has part: feature:996648-996831:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:989078-989223:1:exon

position:989223:1
position: 989223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:990608-990670:1:exon

position:990608:1
position: 990608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:990670:1
position: 990670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:991259-991334:1:exon

position:991259:1
position: 991259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:991334:1
position: 991334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:992064-992112:1:exon

position:992064:1
position: 992064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:992112:1
position: 992112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:992642-992726:1:exon

position:992642:1
position: 992642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:992726:1
position: 992726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:993936-993994:1:exon

position:993936:1
position: 993936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:993994:1
position: 993994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:995292-995483:1:exon

position:995292:1
position: 995292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:995483:1
position: 995483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:996648-996831:1:exon

position:996648:1
position: 996648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MRPS15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: MRPS15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 28S ribosomal protein S15, mitochondrial
translation: MLALLARPGRAWPALLGRAQPACSPVLQAARGYARPVIKKRKDIPSHLDDLPPTMLKKDYANLPVMNSVDDVVKRLLSLEMASQKEKLKVKTQQLVEKVRRSPSDNGSFEVQVAILTAKIRTLEEHLQRHPKDKKNRRLMLMDLDRRRKMLGYLRRVNYSTFENTCRLLDIQYSPPQPYARRVTKRWLVKKALCIKVFQEKQKLKAAEKLKQRQARARAAREQQEKQVQEKEAQEGTPV
SIO_010081: MRPS15
subclass of: SO_0000673
so part of: MRPS15
location: join(989160..989223,990608..990670,991259..991334,992064..992112,992642..992726,993936..993994,995292..995483,996648..996779)
location: region:989160-996779:1
so has part: feature:989160-989223:1:exon
so has part: feature:990608-990670:1:exon
so has part: feature:991259-991334:1:exon
so has part: feature:992064-992112:1:exon
so has part: feature:992642-992726:1:exon
so has part: feature:993936-993994:1:exon
so has part: feature:995292-995483:1:exon
so has part: feature:996648-996779:1:exon

XP_030146267.1
type: Protein
SIO_000068: ncbiprotein

position:989160:1
position: 989160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:996779:1
position: 996779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:989160-989223:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:990608-990670:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:991259-991334:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:992064-992112:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:992642-992726:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:993936-993994:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:995292-995483:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:996648-996779:1:exon

OSCP1
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: OSCP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 997890..1009074
location: region:997890-1009074:1
so has part: feature:997890-1009074:1:exon
subclass of: SO_0000010

100220887
type: Gene
SIO_000068: ncbigene

position:997890:1
position: 997890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1009074:1
position: 1009074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:997890-1009074:1:exon

OSCP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: OSCP1
product: organic solute carrier partner 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 63 samples with support for all annotated introns
transcript id: XM_041720766.1
SIO_010081: OSCP1
subclass of: SO_0000673
so part of: OSCP1
location: join(997890..998056,999853..999882,1002999..1003153,1004270..1004437,1004782..1004862,1005422..1005525,1006159..1006287,1006817..1006886,1007377..1007516,1008063..1008126,1008442..1009074)
location: region:997890-1009074:1
so has part: feature:997890-998056:1:exon
so has part: feature:999853-999882:1:exon
so has part: feature:1002999-1003153:1:exon
so has part: feature:1004270-1004437:1:exon
so has part: feature:1004782-1004862:1:exon
so has part: feature:1005422-1005525:1:exon
so has part: feature:1006159-1006287:1:exon
so has part: feature:1006817-1006886:1:exon
so has part: feature:1007377-1007516:1:exon
so has part: feature:1008063-1008126:1:exon
so has part: feature:1008442-1009074:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:997890-998056:1:exon

position:998056:1
position: 998056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:999853-999882:1:exon

position:999853:1
position: 999853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:999882:1
position: 999882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1002999-1003153:1:exon

position:1002999:1
position: 1002999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1003153:1
position: 1003153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1004270-1004437:1:exon

position:1004270:1
position: 1004270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1004437:1
position: 1004437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1004782-1004862:1:exon

position:1004782:1
position: 1004782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1004862:1
position: 1004862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1005422-1005525:1:exon

position:1005422:1
position: 1005422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1005525:1
position: 1005525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1006159-1006287:1:exon

position:1006159:1
position: 1006159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1006287:1
position: 1006287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1006817-1006886:1:exon

position:1006817:1
position: 1006817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1006886:1
position: 1006886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1007377-1007516:1:exon

position:1007377:1
position: 1007377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1007516:1
position: 1007516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1008063-1008126:1:exon

position:1008063:1
position: 1008063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1008126:1
position: 1008126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1008442-1009074:1:exon

position:1008442:1
position: 1008442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

OSCP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: OSCP1
product: organic solute carrier partner 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 66 samples with support for all annotated introns
transcript id: XM_041720767.1
SIO_010081: OSCP1
subclass of: SO_0000673
so part of: OSCP1
location: join(997890..998056,1002999..1003153,1004270..1004437,1004782..1004862,1005422..1005525,1006159..1006287,1006817..1006886,1007377..1007516,1008063..1008126,1008442..1009073)
location: region:997890-1009073:1
so has part: feature:997890-998056:1:exon
so has part: feature:1002999-1003153:1:exon
so has part: feature:1004270-1004437:1:exon
so has part: feature:1004782-1004862:1:exon
so has part: feature:1005422-1005525:1:exon
so has part: feature:1006159-1006287:1:exon
so has part: feature:1006817-1006886:1:exon
so has part: feature:1007377-1007516:1:exon
so has part: feature:1008063-1008126:1:exon
so has part: feature:1008442-1009073:1:exon

position:1009073:1
position: 1009073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:997890-998056:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1002999-1003153:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1004270-1004437:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1004782-1004862:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1005422-1005525:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1006159-1006287:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1006817-1006886:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1007377-1007516:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1008063-1008126:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1008442-1009073:1:exon

OSCP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: OSCP1
product: organic solute carrier partner 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 82 samples with support for all annotated introns
transcript id: XM_030290385.3
SIO_010081: OSCP1
subclass of: SO_0000673
so part of: OSCP1
location: join(997892..998056,999853..999882,1002999..1003153,1004270..1004437,1004782..1004862,1005422..1005525,1006159..1006287,1006817..1006886,1007377..1007516,1008063..1008126,1008491..1008707)
location: region:997892-1008707:1
so has part: feature:997892-998056:1:exon
so has part: feature:999853-999882:1:exon
so has part: feature:1002999-1003153:1:exon
so has part: feature:1004270-1004437:1:exon
so has part: feature:1004782-1004862:1:exon
so has part: feature:1005422-1005525:1:exon
so has part: feature:1006159-1006287:1:exon
so has part: feature:1006817-1006886:1:exon
so has part: feature:1007377-1007516:1:exon
so has part: feature:1008063-1008126:1:exon
so has part: feature:1008491-1008707:1:exon

position:997892:1
position: 997892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1008707:1
position: 1008707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:997892-998056:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:999853-999882:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1002999-1003153:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1004270-1004437:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1004782-1004862:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1005422-1005525:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1006159-1006287:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1006817-1006886:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1007377-1007516:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1008063-1008126:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1008491-1008707:1:exon

position:1008491:1
position: 1008491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

OSCP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: OSCP1
product: organic solute carrier partner 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 3 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 88 samples with support for all annotated introns
transcript id: XM_012570676.4
SIO_010081: OSCP1
subclass of: SO_0000673
so part of: OSCP1
location: join(997892..998056,1002999..1003153,1004270..1004437,1004782..1004862,1005422..1005525,1006159..1006287,1006817..1006886,1007377..1007516,1008063..1008126,1008491..1008707)
location: region:997892-1008707:1
so has part: feature:997892-998056:1:exon
so has part: feature:1002999-1003153:1:exon
so has part: feature:1004270-1004437:1:exon
so has part: feature:1004782-1004862:1:exon
so has part: feature:1005422-1005525:1:exon
so has part: feature:1006159-1006287:1:exon
so has part: feature:1006817-1006886:1:exon
so has part: feature:1007377-1007516:1:exon
so has part: feature:1008063-1008126:1:exon
so has part: feature:1008491-1008707:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:997892-998056:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1002999-1003153:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1004270-1004437:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1004782-1004862:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1005422-1005525:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1006159-1006287:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1006817-1006886:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1007377-1007516:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1008063-1008126:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1008491-1008707:1:exon

OSCP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: OSCP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein OSCP1 isoform X1
translation: MSARTLPLLFLNLGGEMLYILDQRLRAQSIPGEKARKDEWTDVDRKRVMNDIISTMFNKKFLEELFKPQDLYSKKALRTVYDRLAHASIMRLNQASMDKLYDLMTMAFKYQVLLCPRPRDILLVTFNHLDAIKDFISDSPGILNQVDETFRRLIETYNCLSDGEFQLIRQTLLIFFQDMHIRVSIFLKDKVQNSNGRFVLPISGPVPWGTEVPGLIRLFNHKGVEVKRAEFTTAGNYVTPQREGSFELYGDRVLKLGTNMYSVTRPVETHMSGSSKNLSSQAKENIAPNPLAKEELNFLARLLGGLDIQKPAGGESGFRLNLFTTDEEEEHAAQTRPEELSYKVINIEATQEPGRGHGGAERGVCPAGTGAAGGAVPHPGRAGRSGAAPGQRREGRGSAGTDGRALSGTRGHRDTGTPGQADTGTCGQRDMRTPGHADIGTHGHWDTRTVGQADTGTHGQRDMRIRGHRDMRTTGHGDNGA
SIO_010081: OSCP1
subclass of: SO_0000673
so part of: OSCP1
location: join(997945..998056,999853..999882,1002999..1003153,1004270..1004437,1004782..1004862,1005422..1005525,1006159..1006287,1006817..1006886,1007377..1007516,1008063..1008126,1008442..1008834)
location: region:997945-1008834:1
so has part: feature:997945-998056:1:exon
so has part: feature:999853-999882:1:exon
so has part: feature:1002999-1003153:1:exon
so has part: feature:1004270-1004437:1:exon
so has part: feature:1004782-1004862:1:exon
so has part: feature:1005422-1005525:1:exon
so has part: feature:1006159-1006287:1:exon
so has part: feature:1006817-1006886:1:exon
so has part: feature:1007377-1007516:1:exon
so has part: feature:1008063-1008126:1:exon
so has part: feature:1008442-1008834:1:exon

XP_041576700.1
type: Protein
SIO_000068: ncbiprotein

position:997945:1
position: 997945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1008834:1
position: 1008834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:997945-998056:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:999853-999882:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1002999-1003153:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1004270-1004437:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1004782-1004862:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1005422-1005525:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1006159-1006287:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1006817-1006886:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1007377-1007516:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1008063-1008126:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1008442-1008834:1:exon

OSCP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: OSCP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein OSCP1 isoform X2
translation: MSARTLPLLFLNLGGEMLYILDQRLRAQSIPGEKARKVMNDIISTMFNKKFLEELFKPQDLYSKKALRTVYDRLAHASIMRLNQASMDKLYDLMTMAFKYQVLLCPRPRDILLVTFNHLDAIKDFISDSPGILNQVDETFRRLIETYNCLSDGEFQLIRQTLLIFFQDMHIRVSIFLKDKVQNSNGRFVLPISGPVPWGTEVPGLIRLFNHKGVEVKRAEFTTAGNYVTPQREGSFELYGDRVLKLGTNMYSVTRPVETHMSGSSKNLSSQAKENIAPNPLAKEELNFLARLLGGLDIQKPAGGESGFRLNLFTTDEEEEHAAQTRPEELSYKVINIEATQEPGRGHGGAERGVCPAGTGAAGGAVPHPGRAGRSGAAPGQRREGRGSAGTDGRALSGTRGHRDTGTPGQADTGTCGQRDMRTPGHADIGTHGHWDTRTVGQADTGTHGQRDMRIRGHRDMRTTGHGDNGA
SIO_010081: OSCP1
subclass of: SO_0000673
so part of: OSCP1
location: join(997945..998056,1002999..1003153,1004270..1004437,1004782..1004862,1005422..1005525,1006159..1006287,1006817..1006886,1007377..1007516,1008063..1008126,1008442..1008834)
location: region:997945-1008834:1
so has part: feature:997945-998056:1:exon
so has part: feature:1002999-1003153:1:exon
so has part: feature:1004270-1004437:1:exon
so has part: feature:1004782-1004862:1:exon
so has part: feature:1005422-1005525:1:exon
so has part: feature:1006159-1006287:1:exon
so has part: feature:1006817-1006886:1:exon
so has part: feature:1007377-1007516:1:exon
so has part: feature:1008063-1008126:1:exon
so has part: feature:1008442-1008834:1:exon

XP_041576701.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:997945-998056:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1002999-1003153:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1004270-1004437:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1004782-1004862:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1005422-1005525:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1006159-1006287:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1006817-1006886:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1007377-1007516:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1008063-1008126:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1008442-1008834:1:exon

OSCP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: OSCP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein OSCP1 isoform X3
translation: MSARTLPLLFLNLGGEMLYILDQRLRAQSIPGEKARKDEWTDVDRKRVMNDIISTMFNKKFLEELFKPQDLYSKKALRTVYDRLAHASIMRLNQASMDKLYDLMTMAFKYQVLLCPRPRDILLVTFNHLDAIKDFISDSPGILNQVDETFRRLIETYNCLSDGEFQLIRQTLLIFFQDMHIRVSIFLKDKVQNSNGRFVLPISGPVPWGTEVPGLIRLFNHKGVEVKRAEFTTAGNYVTPQREGSFELYGDRVLKLGTNMYSVTRPVETHMSGSSKNLSSQAKENIAPNPLAKEELNFLARLLGGLDIQKPAGGESGFRLNLFTTDEEEEHAAQTRPEELSYKVINIEATQEPGRRAELSRILGELDVAEPRPDSAEKGEDLLALMDGL
SIO_010081: OSCP1
subclass of: SO_0000673
so part of: OSCP1
location: join(997945..998056,999853..999882,1002999..1003153,1004270..1004437,1004782..1004862,1005422..1005525,1006159..1006287,1006817..1006886,1007377..1007516,1008063..1008126,1008491..1008607)
location: region:997945-1008607:1
so has part: feature:997945-998056:1:exon
so has part: feature:999853-999882:1:exon
so has part: feature:1002999-1003153:1:exon
so has part: feature:1004270-1004437:1:exon
so has part: feature:1004782-1004862:1:exon
so has part: feature:1005422-1005525:1:exon
so has part: feature:1006159-1006287:1:exon
so has part: feature:1006817-1006886:1:exon
so has part: feature:1007377-1007516:1:exon
so has part: feature:1008063-1008126:1:exon
so has part: feature:1008491-1008607:1:exon

XP_030146245.3
type: Protein
SIO_000068: ncbiprotein

position:1008607:1
position: 1008607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:997945-998056:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:999853-999882:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1002999-1003153:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1004270-1004437:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1004782-1004862:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1005422-1005525:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1006159-1006287:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1006817-1006886:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1007377-1007516:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1008063-1008126:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1008491-1008607:1:exon

OSCP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: OSCP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein OSCP1 isoform X4
translation: MSARTLPLLFLNLGGEMLYILDQRLRAQSIPGEKARKVMNDIISTMFNKKFLEELFKPQDLYSKKALRTVYDRLAHASIMRLNQASMDKLYDLMTMAFKYQVLLCPRPRDILLVTFNHLDAIKDFISDSPGILNQVDETFRRLIETYNCLSDGEFQLIRQTLLIFFQDMHIRVSIFLKDKVQNSNGRFVLPISGPVPWGTEVPGLIRLFNHKGVEVKRAEFTTAGNYVTPQREGSFELYGDRVLKLGTNMYSVTRPVETHMSGSSKNLSSQAKENIAPNPLAKEELNFLARLLGGLDIQKPAGGESGFRLNLFTTDEEEEHAAQTRPEELSYKVINIEATQEPGRRAELSRILGELDVAEPRPDSAEKGEDLLALMDGL
SIO_010081: OSCP1
subclass of: SO_0000673
so part of: OSCP1
location: join(997945..998056,1002999..1003153,1004270..1004437,1004782..1004862,1005422..1005525,1006159..1006287,1006817..1006886,1007377..1007516,1008063..1008126,1008491..1008607)
location: region:997945-1008607:1
so has part: feature:997945-998056:1:exon
so has part: feature:1002999-1003153:1:exon
so has part: feature:1004270-1004437:1:exon
so has part: feature:1004782-1004862:1:exon
so has part: feature:1005422-1005525:1:exon
so has part: feature:1006159-1006287:1:exon
so has part: feature:1006817-1006886:1:exon
so has part: feature:1007377-1007516:1:exon
so has part: feature:1008063-1008126:1:exon
so has part: feature:1008491-1008607:1:exon

XP_012426130.4
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:997945-998056:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1002999-1003153:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1004270-1004437:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1004782-1004862:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1005422-1005525:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1006159-1006287:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1006817-1006886:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1007377-1007516:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1008063-1008126:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1008491-1008607:1:exon

LSM10
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LSM10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1009208..1010655
location: region:1009208-1010655:1
so has part: feature:1009208-1010655:1:exon
subclass of: SO_0000010

100225687
type: Gene
SIO_000068: ncbigene

position:1009208:1
position: 1009208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1010655:1
position: 1010655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1009208-1010655:1:exon

LSM10
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 59729
gene: LSM10
product: LSM10, U7 small nuclear RNA associated, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XR_005982437.1
SIO_010081: LSM10
so part of: LSM10
location: join(1009208..1009881,1009972..1010086)
location: region:1009208-1010086:1
so has part: feature:1009208-1009881:1:exon
so has part: feature:1009972-1010086:1:exon

position:1010086:1
position: 1010086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1009208-1009881:1:exon

position:1009881:1
position: 1009881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1009972-1010086:1:exon

position:1009972:1
position: 1009972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LSM10
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 59729
gene: LSM10
product: LSM10, U7 small nuclear RNA associated, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XR_005982438.1
SIO_010081: LSM10
so part of: LSM10
location: join(1009208..1009630,1009703..1010086)
location: region:1009208-1010086:1
so has part: feature:1009208-1009630:1:exon
so has part: feature:1009703-1010086:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1009208-1009630:1:exon

position:1009630:1
position: 1009630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1009703-1010086:1:exon

position:1009703:1
position: 1009703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LSM10
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 59729
gene: LSM10
product: LSM10, U7 small nuclear RNA associated, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XR_005982439.1
SIO_010081: LSM10
so part of: LSM10
location: join(1009208..1009630,1009732..1010086)
location: region:1009208-1010086:1
so has part: feature:1009208-1009630:1:exon
so has part: feature:1009732-1010086:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1009208-1009630:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1009732-1010086:1:exon

position:1009732:1
position: 1009732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LSM10
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 59729
gene: LSM10
product: LSM10, U7 small nuclear RNA associated, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XR_005982440.1
SIO_010081: LSM10
so part of: LSM10
location: join(1009208..1009630,1009762..1010086)
location: region:1009208-1010086:1
so has part: feature:1009208-1009630:1:exon
so has part: feature:1009762-1010086:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1009208-1009630:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1009762-1010086:1:exon

position:1009762:1
position: 1009762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LSM10
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 59729
gene: LSM10
product: LSM10, U7 small nuclear RNA associated, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XR_005982441.1
SIO_010081: LSM10
so part of: LSM10
location: join(1009208..1009570,1009762..1010086)
location: region:1009208-1010086:1
so has part: feature:1009208-1009570:1:exon
so has part: feature:1009762-1010086:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1009208-1009570:1:exon

position:1009570:1
position: 1009570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1009762-1010086:1:exon

LSM10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LSM10
product: LSM10, U7 small nuclear RNA associated, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 1 long SRA read, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_041720773.1
SIO_010081: LSM10
subclass of: SO_0000673
so part of: LSM10
location: join(1009397..1009630,1009972..1010655)
location: region:1009397-1010655:1
so has part: feature:1009397-1009630:1:exon
so has part: feature:1009972-1010655:1:exon

position:1009397:1
position: 1009397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1009397-1009630:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1009972-1010655:1:exon

LSM10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LSM10
product: LSM10, U7 small nuclear RNA associated, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 1 long SRA read, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 82 samples with support for all annotated introns
transcript id: XM_041720772.1
SIO_010081: LSM10
subclass of: SO_0000673
so part of: LSM10
location: join(1009398..1009821,1009972..1010655)
location: region:1009398-1010655:1
so has part: feature:1009398-1009821:1:exon
so has part: feature:1009972-1010655:1:exon

position:1009398:1
position: 1009398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1009398-1009821:1:exon

position:1009821:1
position: 1009821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1009972-1010655:1:exon

LSM10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LSM10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: U7 snRNA-associated Sm-like protein LSm10
translation: MEVSHSLKERTIAENSLVILLQGLRGRVTTVELRDESAAAGRVTSVDAFMNVRLAEVTFTDRQGAVSQLDELFVTGRNIRYVHIPDEVDIRATIEEQLQAIHRVRYFGGRDKGRREFPHAKHK
SIO_010081: LSM10
subclass of: SO_0000673
so part of: LSM10
location: 1010085..1010456
location: region:1010085-1010456:1
so has part: feature:1010085-1010456:1:exon

XP_041576706.1
type: Protein
SIO_000068: ncbiprotein

position:1010085:1
position: 1010085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1010456:1
position: 1010456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1010085-1010456:1:exon

LSM10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LSM10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: U7 snRNA-associated Sm-like protein LSm10
translation: MEVSHSLKERTIAENSLVILLQGLRGRVTTVELRDESAAAGRVTSVDAFMNVRLAEVTFTDRQGAVSQLDELFVTGRNIRYVHIPDEVDIRATIEEQLQAIHRVRYFGGRDKGRREFPHAKHK
SIO_010081: LSM10
subclass of: SO_0000673
so part of: LSM10
location: 1010085..1010456
location: region:1010085-1010456:1
so has part: feature:1010085-1010456:1:exon

XP_041576707.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1010085-1010456:1:exon

STK40
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: STK40
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1011432..1032635
location: region:1011432-1032635:1
so has part: feature:1011432-1032635:1:exon
subclass of: SO_0000010

100219946
type: Gene
SIO_000068: ncbigene

position:1011432:1
position: 1011432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1032635:1
position: 1032635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1011432-1032635:1:exon

STK40
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: STK40
product: serine/threonine kinase 40, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 3 ESTs, 8 long SRA reads, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 98 samples with support for all annotated introns
transcript id: XM_012570686.4
SIO_010081: STK40
subclass of: SO_0000673
so part of: STK40
location: join(1011432..1011534,1017393..1017505,1019366..1019485,1020468..1020553,1021000..1021143,1021799..1022026,1022841..1022893,1025693..1025808,1028874..1029018,1029370..1029489,1029762..1029846,1030467..1032635)
location: region:1011432-1032635:1
so has part: feature:1011432-1011534:1:exon
so has part: feature:1017393-1017505:1:exon
so has part: feature:1019366-1019485:1:exon
so has part: feature:1020468-1020553:1:exon
so has part: feature:1021000-1021143:1:exon
so has part: feature:1021799-1022026:1:exon
so has part: feature:1022841-1022893:1:exon
so has part: feature:1025693-1025808:1:exon
so has part: feature:1028874-1029018:1:exon
so has part: feature:1029370-1029489:1:exon
so has part: feature:1029762-1029846:1:exon
so has part: feature:1030467-1032635:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1011432-1011534:1:exon

position:1011534:1
position: 1011534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1017393-1017505:1:exon

position:1017393:1
position: 1017393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1017505:1
position: 1017505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1019366-1019485:1:exon

position:1019366:1
position: 1019366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1019485:1
position: 1019485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1020468-1020553:1:exon

position:1020468:1
position: 1020468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1020553:1
position: 1020553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1021000-1021143:1:exon

position:1021000:1
position: 1021000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1021143:1
position: 1021143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1021799-1022026:1:exon

position:1021799:1
position: 1021799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1022026:1
position: 1022026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1022841-1022893:1:exon

position:1022841:1
position: 1022841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1022893:1
position: 1022893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1025693-1025808:1:exon

position:1025693:1
position: 1025693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1025808:1
position: 1025808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1028874-1029018:1:exon

position:1028874:1
position: 1028874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1029018:1
position: 1029018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1029370-1029489:1:exon

position:1029370:1
position: 1029370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1029489:1
position: 1029489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1029762-1029846:1:exon

position:1029762:1
position: 1029762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1029846:1
position: 1029846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1030467-1032635:1:exon

position:1030467:1
position: 1030467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

STK40
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: STK40
product: serine/threonine kinase 40, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 3 ESTs, 3 long SRA reads, 7 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 76 samples with support for all annotated introns
transcript id: XM_041720748.1
SIO_010081: STK40
subclass of: SO_0000673
so part of: STK40
location: join(1011574..1011632,1017393..1017505,1019366..1019485,1020468..1020553,1021000..1021143,1021799..1022026,1022841..1022893,1025693..1025808,1028874..1029018,1029370..1029489,1029762..1029846,1030467..1032635)
location: region:1011574-1032635:1
so has part: feature:1011574-1011632:1:exon
so has part: feature:1017393-1017505:1:exon
so has part: feature:1019366-1019485:1:exon
so has part: feature:1020468-1020553:1:exon
so has part: feature:1021000-1021143:1:exon
so has part: feature:1021799-1022026:1:exon
so has part: feature:1022841-1022893:1:exon
so has part: feature:1025693-1025808:1:exon
so has part: feature:1028874-1029018:1:exon
so has part: feature:1029370-1029489:1:exon
so has part: feature:1029762-1029846:1:exon
so has part: feature:1030467-1032635:1:exon

position:1011574:1
position: 1011574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1011574-1011632:1:exon

position:1011632:1
position: 1011632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1017393-1017505:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1019366-1019485:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1020468-1020553:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1021000-1021143:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1021799-1022026:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1022841-1022893:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1025693-1025808:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1028874-1029018:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1029370-1029489:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1029762-1029846:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1030467-1032635:1:exon

STK40
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: STK40
product: serine/threonine kinase 40, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 3 ESTs, 2 long SRA reads, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_030290348.3
SIO_010081: STK40
subclass of: SO_0000673
so part of: STK40
location: join(1014252..1014366,1017393..1017505,1019366..1019485,1020468..1020553,1021000..1021143,1021799..1022026,1022841..1022893,1025693..1025808,1028874..1029018,1029370..1029489,1029762..1029846,1030467..1032635)
location: region:1014252-1032635:1
so has part: feature:1014252-1014366:1:exon
so has part: feature:1017393-1017505:1:exon
so has part: feature:1019366-1019485:1:exon
so has part: feature:1020468-1020553:1:exon
so has part: feature:1021000-1021143:1:exon
so has part: feature:1021799-1022026:1:exon
so has part: feature:1022841-1022893:1:exon
so has part: feature:1025693-1025808:1:exon
so has part: feature:1028874-1029018:1:exon
so has part: feature:1029370-1029489:1:exon
so has part: feature:1029762-1029846:1:exon
so has part: feature:1030467-1032635:1:exon

position:1014252:1
position: 1014252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1014252-1014366:1:exon

position:1014366:1
position: 1014366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1017393-1017505:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1019366-1019485:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1020468-1020553:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1021000-1021143:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1021799-1022026:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1022841-1022893:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1025693-1025808:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1028874-1029018:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1029370-1029489:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1029762-1029846:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1030467-1032635:1:exon

STK40
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: STK40
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase 40
translation: MKRRASDRGAGETSAKAKALCAGISGNNAKRAGPFILGPRLGNSPVPSIVQCLARKDGTDDFYQLKILTLEERGDKGIETQEERQGKMLLHTEYSLLSLLHNQEGVVHHHGLFQDRACEIIEDLEANRMVRKMKKRICLVLDCLCAHDFSDKTADLINLQHYVIKEKRLSERETVVIFYDVVRVVEALHKKNIVHRDLKLGNMVLNKRTHRITITNFCLGKHLVSEDDLLKDQRGSPAYISPDVLSGRPYRGKPSDMWALGVVLFTMLYGQFPFYDSIPQELFRKIKAAEYTIPEDGRVSENTVCLIRKLLVLDPQQRLTASEVLDSLSSIIASWQSMSSLSGPLQVVPDIDDQVANPENPQEVKVTEECSQYEFENYMRQQLLLAEEKNTLHEAKSFLQKRQFGNIPPVRRLGHDAQPMNPLDAAILAQRYLRK
SIO_010081: STK40
subclass of: SO_0000673
so part of: STK40
location: join(1019374..1019485,1020468..1020553,1021000..1021143,1021799..1022026,1022841..1022893,1025693..1025808,1028874..1029018,1029370..1029489,1029762..1029846,1030467..1030685)
location: region:1019374-1030685:1
so has part: feature:1019374-1019485:1:exon
so has part: feature:1020468-1020553:1:exon
so has part: feature:1021000-1021143:1:exon
so has part: feature:1021799-1022026:1:exon
so has part: feature:1022841-1022893:1:exon
so has part: feature:1025693-1025808:1:exon
so has part: feature:1028874-1029018:1:exon
so has part: feature:1029370-1029489:1:exon
so has part: feature:1029762-1029846:1:exon
so has part: feature:1030467-1030685:1:exon

XP_012426140.3
type: Protein
SIO_000068: ncbiprotein

position:1019374:1
position: 1019374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1030685:1
position: 1030685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1019374-1019485:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1020468-1020553:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1021000-1021143:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1021799-1022026:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1022841-1022893:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1025693-1025808:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1028874-1029018:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1029370-1029489:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1029762-1029846:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1030467-1030685:1:exon

STK40
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: STK40
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase 40
translation: MKRRASDRGAGETSAKAKALCAGISGNNAKRAGPFILGPRLGNSPVPSIVQCLARKDGTDDFYQLKILTLEERGDKGIETQEERQGKMLLHTEYSLLSLLHNQEGVVHHHGLFQDRACEIIEDLEANRMVRKMKKRICLVLDCLCAHDFSDKTADLINLQHYVIKEKRLSERETVVIFYDVVRVVEALHKKNIVHRDLKLGNMVLNKRTHRITITNFCLGKHLVSEDDLLKDQRGSPAYISPDVLSGRPYRGKPSDMWALGVVLFTMLYGQFPFYDSIPQELFRKIKAAEYTIPEDGRVSENTVCLIRKLLVLDPQQRLTASEVLDSLSSIIASWQSMSSLSGPLQVVPDIDDQVANPENPQEVKVTEECSQYEFENYMRQQLLLAEEKNTLHEAKSFLQKRQFGNIPPVRRLGHDAQPMNPLDAAILAQRYLRK
SIO_010081: STK40
subclass of: SO_0000673
so part of: STK40
location: join(1019374..1019485,1020468..1020553,1021000..1021143,1021799..1022026,1022841..1022893,1025693..1025808,1028874..1029018,1029370..1029489,1029762..1029846,1030467..1030685)
location: region:1019374-1030685:1
so has part: feature:1019374-1019485:1:exon
so has part: feature:1020468-1020553:1:exon
so has part: feature:1021000-1021143:1:exon
so has part: feature:1021799-1022026:1:exon
so has part: feature:1022841-1022893:1:exon
so has part: feature:1025693-1025808:1:exon
so has part: feature:1028874-1029018:1:exon
so has part: feature:1029370-1029489:1:exon
so has part: feature:1029762-1029846:1:exon
so has part: feature:1030467-1030685:1:exon

XP_030146208.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1019374-1019485:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1020468-1020553:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1021000-1021143:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1021799-1022026:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1022841-1022893:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1025693-1025808:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1028874-1029018:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1029370-1029489:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1029762-1029846:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1030467-1030685:1:exon

STK40
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: STK40
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase 40
translation: MKRRASDRGAGETSAKAKALCAGISGNNAKRAGPFILGPRLGNSPVPSIVQCLARKDGTDDFYQLKILTLEERGDKGIETQEERQGKMLLHTEYSLLSLLHNQEGVVHHHGLFQDRACEIIEDLEANRMVRKMKKRICLVLDCLCAHDFSDKTADLINLQHYVIKEKRLSERETVVIFYDVVRVVEALHKKNIVHRDLKLGNMVLNKRTHRITITNFCLGKHLVSEDDLLKDQRGSPAYISPDVLSGRPYRGKPSDMWALGVVLFTMLYGQFPFYDSIPQELFRKIKAAEYTIPEDGRVSENTVCLIRKLLVLDPQQRLTASEVLDSLSSIIASWQSMSSLSGPLQVVPDIDDQVANPENPQEVKVTEECSQYEFENYMRQQLLLAEEKNTLHEAKSFLQKRQFGNIPPVRRLGHDAQPMNPLDAAILAQRYLRK
SIO_010081: STK40
subclass of: SO_0000673
so part of: STK40
location: join(1019374..1019485,1020468..1020553,1021000..1021143,1021799..1022026,1022841..1022893,1025693..1025808,1028874..1029018,1029370..1029489,1029762..1029846,1030467..1030685)
location: region:1019374-1030685:1
so has part: feature:1019374-1019485:1:exon
so has part: feature:1020468-1020553:1:exon
so has part: feature:1021000-1021143:1:exon
so has part: feature:1021799-1022026:1:exon
so has part: feature:1022841-1022893:1:exon
so has part: feature:1025693-1025808:1:exon
so has part: feature:1028874-1029018:1:exon
so has part: feature:1029370-1029489:1:exon
so has part: feature:1029762-1029846:1:exon
so has part: feature:1030467-1030685:1:exon

XP_041576682.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1019374-1019485:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1020468-1020553:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1021000-1021143:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1021799-1022026:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1022841-1022893:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1025693-1025808:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1028874-1029018:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1029370-1029489:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1029762-1029846:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1030467-1030685:1:exon

EVA1B
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: EVA1B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1033044..1040738
location: region:1033044-1040738:1
so has part: feature:1033044-1040738:1:exon
subclass of: SO_0000010

100230488
type: Gene
SIO_000068: ncbigene

position:1033044:1
position: 1033044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1040738:1
position: 1040738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1033044-1040738:1:exon

EVA1B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: EVA1B
product: eva-1 homolog B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_030290535.3
SIO_010081: EVA1B
subclass of: SO_0000673
so part of: EVA1B
location: join(1033044..1033225,1034672..1034788,1034870..1040738)
location: region:1033044-1040738:1
so has part: feature:1033044-1033225:1:exon
so has part: feature:1034672-1034788:1:exon
so has part: feature:1034870-1040738:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1033044-1033225:1:exon

position:1033225:1
position: 1033225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1034672-1034788:1:exon

position:1034672:1
position: 1034672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1034788:1
position: 1034788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1034870-1040738:1:exon

position:1034870:1
position: 1034870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

EVA1B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: EVA1B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein eva-1 homolog B
translation: MLNRPCSPSLAPAKVPRLCRRRRPTHAQHVPSLEPLRPAGHRMESRRRDMELLSNSMAAYAHIRANPESFGLYFVLGVCFGLVLTLCLLVLRLSCRPSPRPPARPGDLSEDDDEDEEDEDEEDTVDRAASESLLPVTEIPLESHGPGDGALAVNVFASAEELERAQRLEERERIIREIWRNGQPDILGSGTIGTLGRVHYY
SIO_010081: EVA1B
subclass of: SO_0000673
so part of: EVA1B
location: join(1033150..1033225,1034672..1034788,1034870..1035282)
location: region:1033150-1035282:1
so has part: feature:1033150-1033225:1:exon
so has part: feature:1034672-1034788:1:exon
so has part: feature:1034870-1035282:1:exon

XP_030146395.3
type: Protein
SIO_000068: ncbiprotein

position:1033150:1
position: 1033150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1035282:1
position: 1035282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1033150-1033225:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1034672-1034788:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1034870-1035282:1:exon

LOC115498277
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC115498277
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1036308..1037424)
location: region:1036308-1037424:-1
so has part: feature:1036308-1037424:-1:exon
subclass of: SO_0000010

115498277
type: Gene
SIO_000068: ncbigene

position:1036308:-1
position: 1036308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1037424:-1
position: 1037424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1036308-1037424:-1:exon

LOC115498277
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC115498277
product: CD2-associated protein-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_030290533.3
SIO_010081: LOC115498277
subclass of: SO_0000673
so part of: LOC115498277
location: complement(join(1036308..1036667,1036758..1037076,1037164..1037225,1037314..1037424))
location: region:1036308-1037424:-1
so has part: feature:1037314-1037424:-1:exon
so has part: feature:1037164-1037225:-1:exon
so has part: feature:1036758-1037076:-1:exon
so has part: feature:1036308-1036667:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1037314-1037424:-1:exon

position:1037314:-1
position: 1037314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1037164-1037225:-1:exon

position:1037164:-1
position: 1037164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1037225:-1
position: 1037225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1036758-1037076:-1:exon

position:1036758:-1
position: 1036758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1037076:-1
position: 1037076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1036308-1036667:-1:exon

position:1036667:-1
position: 1036667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115498277
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC115498277
product: CD2-associated protein-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_041720810.1
SIO_010081: LOC115498277
subclass of: SO_0000673
so part of: LOC115498277
location: complement(join(1036308..1036530,1036604..1036667,1036758..1037225,1037314..1037424))
location: region:1036308-1037424:-1
so has part: feature:1037314-1037424:-1:exon
so has part: feature:1036758-1037225:-1:exon
so has part: feature:1036604-1036667:-1:exon
so has part: feature:1036308-1036530:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1037314-1037424:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1036758-1037225:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1036604-1036667:-1:exon

position:1036604:-1
position: 1036604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1036308-1036530:-1:exon

position:1036530:-1
position: 1036530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115498277
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC115498277
product: CD2-associated protein-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_041720809.1
SIO_010081: LOC115498277
subclass of: SO_0000673
so part of: LOC115498277
location: complement(join(1036308..1036667,1036758..1037225,1037314..1037424))
location: region:1036308-1037424:-1
so has part: feature:1037314-1037424:-1:exon
so has part: feature:1036758-1037225:-1:exon
so has part: feature:1036308-1036667:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1037314-1037424:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1036758-1037225:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1036308-1036667:-1:exon

LOC115498277
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC115498277
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SH3 domain-containing kinase-binding protein 1-like isoform X2
translation: MEPTKLPLTKRMAPAPPVPAKTKPAPVLPTKPGDPQPSTSAAVEWGRAGDPDANGFNTVPVTTARLSHPTATRPRVPGQRPPSMVLGSTGGPHGGEQPQGLPRAALCAPVPSTGQAPVPPWSTEGLEVLEGRLLALEDLKAEVRTLHILVDLMRVQHLRDLQDLRQELCQEQAQRQALQVSPCRGLPRPGVPCAPQQSQPLPTGGDRASEEGAALLAWGAAVPTHGTGQGGGTWLRVPPQPGSAPVGYKCPPHTQALLLEA
SIO_010081: LOC115498277
subclass of: SO_0000673
so part of: LOC115498277
location: complement(join(1036355..1036667,1036758..1037076,1037164..1037225,1037314..1037405))
location: region:1036355-1037405:-1
so has part: feature:1037314-1037405:-1:exon
so has part: feature:1037164-1037225:-1:exon
so has part: feature:1036758-1037076:-1:exon
so has part: feature:1036355-1036667:-1:exon

XP_030146393.3
type: Protein
SIO_000068: ncbiprotein

position:1036355:-1
position: 1036355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1037405:-1
position: 1037405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1037314-1037405:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1037164-1037225:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1036758-1037076:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1036355-1036667:-1:exon

LOC115498277
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC115498277
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC115498277 isoform X1
translation: MEPTKLPLTKRMAPAPPVPAKTKPAPVLPTKPGDPQPSTSAAVEWGRAGDPGRLQGPCRGLQGWPGPAQHQGLIPVPSLADANGFNTVPVTTARLSHPTATRPRVPGQRPPSMVLGSTGGPHGGEQPQGLPRAALCAPVPSTGQAPVPPWSTEGLEVLEGRLLALEDLKAEVRTLHILVDLMRVQHLRDLQDLRQELCQEQAQRQALQVSPCRGLPRPGVPCAPQQSQPLPTGGDRASEEGAALLAWGAAVPTHGTGQGGGTWLRVPPQPGSAPVGYKCPPHTQALLLEA
SIO_010081: LOC115498277
subclass of: SO_0000673
so part of: LOC115498277
location: complement(join(1036355..1036667,1036758..1037225,1037314..1037405))
location: region:1036355-1037405:-1
so has part: feature:1037314-1037405:-1:exon
so has part: feature:1036758-1037225:-1:exon
so has part: feature:1036355-1036667:-1:exon

XP_041576743.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1037314-1037405:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1036758-1037225:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1036355-1036667:-1:exon

LOC115498277
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC115498277
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CD2-associated protein-like isoform X3
translation: MEPTKLPLTKRMAPAPPVPAKTKPAPVLPTKPGDPQPSTSAAVEWGRAGDPGRLQGPCRGLQGWPGPAQHQGLIPVPSLADANGFNTVPVTTARLSHPTATRPRVPGQRPPSMVLGSTGGPHGGEQPQGLPRAALCAPVPSTGQAPVPPWSTEGLEVLEGRLLALEDLKAEVRTLHILVDLMRVQHLRDLQDLRQELCQEQAQRQALQAEIERVRKGLPC
SIO_010081: LOC115498277
subclass of: SO_0000673
so part of: LOC115498277
location: complement(join(1036492..1036530,1036604..1036667,1036758..1037225,1037314..1037405))
location: region:1036492-1037405:-1
so has part: feature:1037314-1037405:-1:exon
so has part: feature:1036758-1037225:-1:exon
so has part: feature:1036604-1036667:-1:exon
so has part: feature:1036492-1036530:-1:exon

XP_041576744.1
type: Protein
SIO_000068: ncbiprotein

position:1036492:-1
position: 1036492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1037314-1037405:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1036758-1037225:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1036604-1036667:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1036492-1036530:-1:exon

THRAP3
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: THRAP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1039554..1065907)
location: region:1039554-1065907:-1
so has part: feature:1039554-1065907:-1:exon
subclass of: SO_0000010

100224779
type: Gene
SIO_000068: ncbigene

position:1039554:-1
position: 1039554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1065907:-1
position: 1065907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1039554-1065907:-1:exon

THRAP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: THRAP3
product: thyroid hormone receptor associated protein 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 ESTs, 2 long SRA reads, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 103 samples with support for all annotated introns
transcript id: XM_030290531.3
SIO_010081: THRAP3
subclass of: SO_0000673
so part of: THRAP3
location: complement(join(1039554..1041030,1041262..1041408,1042009..1042201,1042795..1042979,1045234..1045318,1045583..1045694,1046155..1046327,1046858..1047598,1048969..1049874,1053069..1053229,1056828..1056910,1060901..1060959,1065822..1065907))
location: region:1039554-1065907:-1
so has part: feature:1065822-1065907:-1:exon
so has part: feature:1060901-1060959:-1:exon
so has part: feature:1056828-1056910:-1:exon
so has part: feature:1053069-1053229:-1:exon
so has part: feature:1048969-1049874:-1:exon
so has part: feature:1046858-1047598:-1:exon
so has part: feature:1046155-1046327:-1:exon
so has part: feature:1045583-1045694:-1:exon
so has part: feature:1045234-1045318:-1:exon
so has part: feature:1042795-1042979:-1:exon
so has part: feature:1042009-1042201:-1:exon
so has part: feature:1041262-1041408:-1:exon
so has part: feature:1039554-1041030:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1065822-1065907:-1:exon

position:1065822:-1
position: 1065822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1060901-1060959:-1:exon

position:1060901:-1
position: 1060901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1060959:-1
position: 1060959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1056828-1056910:-1:exon

position:1056828:-1
position: 1056828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1056910:-1
position: 1056910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1053069-1053229:-1:exon

position:1053069:-1
position: 1053069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1053229:-1
position: 1053229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1048969-1049874:-1:exon

position:1048969:-1
position: 1048969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1049874:-1
position: 1049874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1046858-1047598:-1:exon

position:1046858:-1
position: 1046858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1047598:-1
position: 1047598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1046155-1046327:-1:exon

position:1046155:-1
position: 1046155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1046327:-1
position: 1046327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1045583-1045694:-1:exon

position:1045583:-1
position: 1045583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1045694:-1
position: 1045694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1045234-1045318:-1:exon

position:1045234:-1
position: 1045234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1045318:-1
position: 1045318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1042795-1042979:-1:exon

position:1042795:-1
position: 1042795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1042979:-1
position: 1042979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1042009-1042201:-1:exon

position:1042009:-1
position: 1042009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1042201:-1
position: 1042201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1041262-1041408:-1:exon

position:1041262:-1
position: 1041262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1041408:-1
position: 1041408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1039554-1041030:-1:exon

position:1041030:-1
position: 1041030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

THRAP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: THRAP3
product: thyroid hormone receptor associated protein 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 29 ESTs, 4 long SRA reads, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 103 samples with support for all annotated introns
transcript id: XM_030290529.3
SIO_010081: THRAP3
subclass of: SO_0000673
so part of: THRAP3
location: complement(join(1039554..1041030,1041262..1041411,1042009..1042201,1042795..1042979,1045234..1045318,1045583..1045694,1046155..1046327,1046858..1047598,1048969..1049874,1053069..1053229,1056828..1056910,1060901..1060959,1065822..1065907))
location: region:1039554-1065907:-1
so has part: feature:1065822-1065907:-1:exon
so has part: feature:1060901-1060959:-1:exon
so has part: feature:1056828-1056910:-1:exon
so has part: feature:1053069-1053229:-1:exon
so has part: feature:1048969-1049874:-1:exon
so has part: feature:1046858-1047598:-1:exon
so has part: feature:1046155-1046327:-1:exon
so has part: feature:1045583-1045694:-1:exon
so has part: feature:1045234-1045318:-1:exon
so has part: feature:1042795-1042979:-1:exon
so has part: feature:1042009-1042201:-1:exon
so has part: feature:1041262-1041411:-1:exon
so has part: feature:1039554-1041030:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1065822-1065907:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1060901-1060959:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1056828-1056910:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1053069-1053229:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1048969-1049874:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1046858-1047598:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1046155-1046327:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1045583-1045694:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1045234-1045318:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1042795-1042979:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1042009-1042201:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1041262-1041411:-1:exon

position:1041411:-1
position: 1041411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1039554-1041030:-1:exon

THRAP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: THRAP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: thyroid hormone receptor-associated protein 3 isoform X2
translation: MSKTNKSKSGSRSSRSRSGSRSRSRSFSKSRSRSRSISRSRKRRLSSRSRSRSYSPSHNRERNHPRVYQNRDFRGHNRGYRRPYYFRGRNRGFYPWGQYNRGGYGNYRSNWQNYRQAYSPRRGRSRSRSPKRRSPSPRSRSHSRNSDKSSSDRSRRSSSSRSSSNHSRVDSSKRKSGKEKKSSSKDARASQAAGDNQGDESKEQQFSAAGAQDAKASEGSKPWQDVSSYGTGSTSRGSVSELSPRERSPALKSPLQSVVVRRRSPRPSPVQKPSPPRSSPSPMGSATPSGSTSFQGGSHQSPFEHGSAGMSPTRKSPVCKSPTPVSSMYGATPKEEGTAPGGGAFSKRYLEEQKTENGKDKDQKVTNTEKEKSKEKGNFSELGSTDGKAKSDSYGSKADSEKGYRGSQSPKRYKFRDDFDKLKVPEFHKEGHYGKDETDEQDKKDKAKGRKDSEFDEEPKFMSKVVATSSKSQEEDRSGKWEGVVFLPPGKEKQRKPDEMEEESYSERSKKEERPGSKRAEPGHRGFVPEKNFRVTTYKSSQEKSSSPPPRKASEVKEKPGTKVEGLTPGKSSFSITREAQVNIRMDSFDEDLARPSGILAQERKLCRDLVHSNKKEQEFRSIFHHIQSAQSQRSPSELFAQHIVTIVHHVREHHFGSSAMTLNERFTKYLKKGMEQDAAKNKKSPEIHRRIDISPSTFRKHGFSQEESKSSRDPGFKAEGKYKDDPVDLRLDIERRKKHKERDLKRDKSRESVDSRDSSHSRERSTEKTEKSHKGSKKKKHRRVRERSRSSSSSSWSSHSVKAEEYPEETEEREESSTGFDKSRLGTKEFSGPNERGRARGTFFRARGRGWGRGNFSGNNNSNSGGNNDFQKRSREEEWDPEYTPKSKKYYLHDDREGEGTDKWVNRGRGRGAFPRGRGRFMFRKSSTSPKWAHDKFSGEEGEIEDDESGTENREEKDALQTTAE
SIO_010081: THRAP3
subclass of: SO_0000673
so part of: THRAP3
location: complement(join(1040809..1041030,1041262..1041408,1042009..1042201,1042795..1042979,1045234..1045318,1045583..1045694,1046155..1046327,1046858..1047598,1048969..1049874,1053069..1053205))
location: region:1040809-1053205:-1
so has part: feature:1053069-1053205:-1:exon
so has part: feature:1048969-1049874:-1:exon
so has part: feature:1046858-1047598:-1:exon
so has part: feature:1046155-1046327:-1:exon
so has part: feature:1045583-1045694:-1:exon
so has part: feature:1045234-1045318:-1:exon
so has part: feature:1042795-1042979:-1:exon
so has part: feature:1042009-1042201:-1:exon
so has part: feature:1041262-1041408:-1:exon
so has part: feature:1040809-1041030:-1:exon

XP_030146391.1
type: Protein
SIO_000068: ncbiprotein

position:1040809:-1
position: 1040809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1053205:-1
position: 1053205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1053069-1053205:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1048969-1049874:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1046858-1047598:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1046155-1046327:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1045583-1045694:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1045234-1045318:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1042795-1042979:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1042009-1042201:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1041262-1041408:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1040809-1041030:-1:exon

THRAP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: THRAP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: thyroid hormone receptor-associated protein 3 isoform X1
translation: MSKTNKSKSGSRSSRSRSGSRSRSRSFSKSRSRSRSISRSRKRRLSSRSRSRSYSPSHNRERNHPRVYQNRDFRGHNRGYRRPYYFRGRNRGFYPWGQYNRGGYGNYRSNWQNYRQAYSPRRGRSRSRSPKRRSPSPRSRSHSRNSDKSSSDRSRRSSSSRSSSNHSRVDSSKRKSGKEKKSSSKDARASQAAGDNQGDESKEQQFSAAGAQDAKASEGSKPWQDVSSYGTGSTSRGSVSELSPRERSPALKSPLQSVVVRRRSPRPSPVQKPSPPRSSPSPMGSATPSGSTSFQGGSHQSPFEHGSAGMSPTRKSPVCKSPTPVSSMYGATPKEEGTAPGGGAFSKRYLEEQKTENGKDKDQKVTNTEKEKSKEKGNFSELGSTDGKAKSDSYGSKADSEKGYRGSQSPKRYKFRDDFDKLKVPEFHKEGHYGKDETDEQDKKDKAKGRKDSEFDEEPKFMSKVVATSSKSQEEDRSGKWEGVVFLPPGKEKQRKPDEMEEESYSERSKKEERPGSKRAEPGHRGFVPEKNFRVTTYKSSQEKSSSPPPRKASEVKEKPGTKVEGLTPGKSSFSITREAQVNIRMDSFDEDLARPSGILAQERKLCRDLVHSNKKEQEFRSIFHHIQSAQSQRSPSELFAQHIVTIVHHVREHHFGSSAMTLNERFTKYLKKGMEQDAAKNKKSPEIHRRIDISPSTFRKHGFSQEESKSSRDPGFKAEGKYKDDPVDLRLDIERRKKHKERDLKRDKSRESVDSRDSSHSRERSTEKTEKSHKGSKKKKHRRVRERSRSSSSSSWSSHSVKAEEYPEETEEREESSTGFDKSRLGTKEFSGPNERGRARGTFQFRARGRGWGRGNFSGNNNSNSGGNNDFQKRSREEEWDPEYTPKSKKYYLHDDREGEGTDKWVNRGRGRGAFPRGRGRFMFRKSSTSPKWAHDKFSGEEGEIEDDESGTENREEKDALQTTAE
SIO_010081: THRAP3
subclass of: SO_0000673
so part of: THRAP3
location: complement(join(1040809..1041030,1041262..1041411,1042009..1042201,1042795..1042979,1045234..1045318,1045583..1045694,1046155..1046327,1046858..1047598,1048969..1049874,1053069..1053205))
location: region:1040809-1053205:-1
so has part: feature:1053069-1053205:-1:exon
so has part: feature:1048969-1049874:-1:exon
so has part: feature:1046858-1047598:-1:exon
so has part: feature:1046155-1046327:-1:exon
so has part: feature:1045583-1045694:-1:exon
so has part: feature:1045234-1045318:-1:exon
so has part: feature:1042795-1042979:-1:exon
so has part: feature:1042009-1042201:-1:exon
so has part: feature:1041262-1041411:-1:exon
so has part: feature:1040809-1041030:-1:exon

XP_030146389.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1053069-1053205:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1048969-1049874:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1046858-1047598:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1046155-1046327:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1045583-1045694:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1045234-1045318:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1042795-1042979:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1042009-1042201:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1041262-1041411:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1040809-1041030:-1:exon

MAP7D1
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: MAP7D1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1066766..1082853)
location: region:1066766-1082853:-1
so has part: feature:1066766-1082853:-1:exon
subclass of: SO_0000010

101233894
type: Gene
SIO_000068: ncbigene

position:1066766:-1
position: 1066766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1082853:-1
position: 1082853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1066766-1082853:-1:exon

MAP7D1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: MAP7D1
product: MAP7 domain containing 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_041720741.1
SIO_010081: MAP7D1
subclass of: SO_0000673
so part of: MAP7D1
location: complement(join(1066766..1067284,1067357..1067547,1067679..1067796,1067879..1067963,1068038..1068091,1068214..1068318,1068570..1068729,1068800..1068974,1069051..1069400,1069492..1069888,1070017..1070139,1071501..1071611,1074002..1074116,1074402..1074565,1075452..1075520,1075625..1076269,1082733..1082853))
location: region:1066766-1082853:-1
so has part: feature:1082733-1082853:-1:exon
so has part: feature:1075625-1076269:-1:exon
so has part: feature:1075452-1075520:-1:exon
so has part: feature:1074402-1074565:-1:exon
so has part: feature:1074002-1074116:-1:exon
so has part: feature:1071501-1071611:-1:exon
so has part: feature:1070017-1070139:-1:exon
so has part: feature:1069492-1069888:-1:exon
so has part: feature:1069051-1069400:-1:exon
so has part: feature:1068800-1068974:-1:exon
so has part: feature:1068570-1068729:-1:exon
so has part: feature:1068214-1068318:-1:exon
so has part: feature:1068038-1068091:-1:exon
so has part: feature:1067879-1067963:-1:exon
so has part: feature:1067679-1067796:-1:exon
so has part: feature:1067357-1067547:-1:exon
so has part: feature:1066766-1067284:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1082733-1082853:-1:exon

position:1082733:-1
position: 1082733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1075625-1076269:-1:exon

position:1075625:-1
position: 1075625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1076269:-1
position: 1076269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1075452-1075520:-1:exon

position:1075452:-1
position: 1075452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1075520:-1
position: 1075520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1074402-1074565:-1:exon

position:1074402:-1
position: 1074402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1074565:-1
position: 1074565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1074002-1074116:-1:exon

position:1074002:-1
position: 1074002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1074116:-1
position: 1074116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1071501-1071611:-1:exon

position:1071501:-1
position: 1071501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1071611:-1
position: 1071611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1070017-1070139:-1:exon

position:1070017:-1
position: 1070017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1070139:-1
position: 1070139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1069492-1069888:-1:exon

position:1069492:-1
position: 1069492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1069888:-1
position: 1069888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1069051-1069400:-1:exon

position:1069051:-1
position: 1069051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1069400:-1
position: 1069400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1068800-1068974:-1:exon

position:1068800:-1
position: 1068800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1068974:-1
position: 1068974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1068570-1068729:-1:exon

position:1068570:-1
position: 1068570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1068729:-1
position: 1068729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1068214-1068318:-1:exon

position:1068214:-1
position: 1068214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1068318:-1
position: 1068318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1068038-1068091:-1:exon

position:1068038:-1
position: 1068038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1068091:-1
position: 1068091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1067879-1067963:-1:exon

position:1067879:-1
position: 1067879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1067963:-1
position: 1067963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1067679-1067796:-1:exon

position:1067679:-1
position: 1067679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1067796:-1
position: 1067796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1067357-1067547:-1:exon

position:1067357:-1
position: 1067357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1067547:-1
position: 1067547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1066766-1067284:-1:exon

position:1067284:-1
position: 1067284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MAP7D1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: MAP7D1
product: MAP7 domain containing 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_041720744.1
SIO_010081: MAP7D1
subclass of: SO_0000673
so part of: MAP7D1
location: complement(join(1066766..1067284,1067357..1067547,1067679..1067796,1067879..1067963,1068038..1068091,1068214..1068318,1068570..1068729,1068800..1068974,1069051..1069400,1069492..1069888,1070017..1070139,1071501..1071611,1074002..1074116,1074402..1074565,1075452..1075520,1075625..1076269,1082666..1082739))
location: region:1066766-1082739:-1
so has part: feature:1082666-1082739:-1:exon
so has part: feature:1075625-1076269:-1:exon
so has part: feature:1075452-1075520:-1:exon
so has part: feature:1074402-1074565:-1:exon
so has part: feature:1074002-1074116:-1:exon
so has part: feature:1071501-1071611:-1:exon
so has part: feature:1070017-1070139:-1:exon
so has part: feature:1069492-1069888:-1:exon
so has part: feature:1069051-1069400:-1:exon
so has part: feature:1068800-1068974:-1:exon
so has part: feature:1068570-1068729:-1:exon
so has part: feature:1068214-1068318:-1:exon
so has part: feature:1068038-1068091:-1:exon
so has part: feature:1067879-1067963:-1:exon
so has part: feature:1067679-1067796:-1:exon
so has part: feature:1067357-1067547:-1:exon
so has part: feature:1066766-1067284:-1:exon

position:1082739:-1
position: 1082739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1082666-1082739:-1:exon

position:1082666:-1
position: 1082666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1075625-1076269:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1075452-1075520:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1074402-1074565:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1074002-1074116:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1071501-1071611:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1070017-1070139:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1069492-1069888:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1069051-1069400:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1068800-1068974:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1068570-1068729:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1068214-1068318:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1068038-1068091:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1067879-1067963:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1067679-1067796:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1067357-1067547:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1066766-1067284:-1:exon

MAP7D1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: MAP7D1
product: MAP7 domain containing 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_041720743.1
SIO_010081: MAP7D1
subclass of: SO_0000673
so part of: MAP7D1
location: complement(join(1066766..1067284,1067357..1067547,1067679..1067796,1067879..1067963,1068038..1068091,1068214..1068318,1068570..1068729,1068800..1068974,1069051..1069400,1069492..1069888,1070017..1070139,1071501..1071611,1074002..1074116,1074402..1074565,1075452..1075520,1075625..1076269,1082525..1082656))
location: region:1066766-1082656:-1
so has part: feature:1082525-1082656:-1:exon
so has part: feature:1075625-1076269:-1:exon
so has part: feature:1075452-1075520:-1:exon
so has part: feature:1074402-1074565:-1:exon
so has part: feature:1074002-1074116:-1:exon
so has part: feature:1071501-1071611:-1:exon
so has part: feature:1070017-1070139:-1:exon
so has part: feature:1069492-1069888:-1:exon
so has part: feature:1069051-1069400:-1:exon
so has part: feature:1068800-1068974:-1:exon
so has part: feature:1068570-1068729:-1:exon
so has part: feature:1068214-1068318:-1:exon
so has part: feature:1068038-1068091:-1:exon
so has part: feature:1067879-1067963:-1:exon
so has part: feature:1067679-1067796:-1:exon
so has part: feature:1067357-1067547:-1:exon
so has part: feature:1066766-1067284:-1:exon

position:1082656:-1
position: 1082656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1082525-1082656:-1:exon

position:1082525:-1
position: 1082525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1075625-1076269:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1075452-1075520:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1074402-1074565:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1074002-1074116:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1071501-1071611:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1070017-1070139:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1069492-1069888:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1069051-1069400:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1068800-1068974:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1068570-1068729:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1068214-1068318:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1068038-1068091:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1067879-1067963:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1067679-1067796:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1067357-1067547:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1066766-1067284:-1:exon

MAP7D1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: MAP7D1
product: MAP7 domain containing 1, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 58 samples with support for all annotated introns
transcript id: XM_041720746.1
SIO_010081: MAP7D1
subclass of: SO_0000673
so part of: MAP7D1
location: complement(join(1066766..1067284,1067357..1067547,1067679..1067796,1067879..1067963,1068038..1068091,1068214..1068318,1068570..1068729,1068800..1068974,1069051..1069400,1069492..1069625,1069746..1069888,1070017..1070139,1074002..1074116,1074402..1074565,1075452..1075520,1075625..1076269,1082174..1082325))
location: region:1066766-1082325:-1
so has part: feature:1082174-1082325:-1:exon
so has part: feature:1075625-1076269:-1:exon
so has part: feature:1075452-1075520:-1:exon
so has part: feature:1074402-1074565:-1:exon
so has part: feature:1074002-1074116:-1:exon
so has part: feature:1070017-1070139:-1:exon
so has part: feature:1069746-1069888:-1:exon
so has part: feature:1069492-1069625:-1:exon
so has part: feature:1069051-1069400:-1:exon
so has part: feature:1068800-1068974:-1:exon
so has part: feature:1068570-1068729:-1:exon
so has part: feature:1068214-1068318:-1:exon
so has part: feature:1068038-1068091:-1:exon
so has part: feature:1067879-1067963:-1:exon
so has part: feature:1067679-1067796:-1:exon
so has part: feature:1067357-1067547:-1:exon
so has part: feature:1066766-1067284:-1:exon

position:1082325:-1
position: 1082325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1082174-1082325:-1:exon

position:1082174:-1
position: 1082174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
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urn:…
SIO_000300: 7
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position:1069746:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
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position:1069625:-1
position: 1069625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
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MAP7D1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: MAP7D1
product: MAP7 domain containing 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 58 samples with support for all annotated introns
transcript id: XM_041720745.1
SIO_010081: MAP7D1
subclass of: SO_0000673
so part of: MAP7D1
location: complement(join(1066766..1067284,1067357..1067547,1067679..1067796,1067879..1067963,1068038..1068091,1068214..1068318,1068570..1068729,1068800..1068974,1069051..1069400,1069492..1069888,1070017..1070139,1074002..1074116,1074402..1074565,1075452..1075520,1075625..1076269,1082174..1082325))
location: region:1066766-1082325:-1
so has part: feature:1082174-1082325:-1:exon
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urn:…
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urn:…
SIO_000300: 16
SIO_000628: feature:1066766-1067284:-1:exon

MAP7D1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: MAP7D1
product: MAP7 domain containing 1, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 74 samples with support for all annotated introns
transcript id: XM_030290352.3
SIO_010081: MAP7D1
subclass of: SO_0000673
so part of: MAP7D1
location: complement(join(1066766..1067284,1067357..1067547,1067679..1067796,1067879..1067936,1068038..1068091,1068214..1068318,1068570..1068729,1068800..1068974,1069051..1069400,1069492..1069625,1069746..1069888,1070017..1070139,1071501..1071611,1074002..1074116,1074402..1074565,1075452..1075520,1075625..1076269,1082174..1082325))
location: region:1066766-1082325:-1
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urn:…
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position:1067936:-1
position: 1067936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
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SIO_000300: 17
SIO_000628: feature:1067357-1067547:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1066766-1067284:-1:exon

MAP7D1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: MAP7D1
product: MAP7 domain containing 1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 58 samples with support for all annotated introns
transcript id: XM_030290350.3
SIO_010081: MAP7D1
subclass of: SO_0000673
so part of: MAP7D1
location: complement(join(1066766..1067284,1067357..1067547,1067679..1067796,1067879..1067963,1068038..1068091,1068214..1068318,1068570..1068729,1068800..1068974,1069051..1069400,1069492..1069625,1069746..1069888,1070017..1070139,1071501..1071611,1074002..1074116,1074402..1074565,1075452..1075520,1075625..1076269,1082174..1082325))
location: region:1066766-1082325:-1
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urn:…
SIO_000300: 18
SIO_000628: feature:1066766-1067284:-1:exon

MAP7D1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: MAP7D1
product: MAP7 domain containing 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 74 samples with support for all annotated introns
transcript id: XM_041720742.1
SIO_010081: MAP7D1
subclass of: SO_0000673
so part of: MAP7D1
location: complement(join(1066766..1067284,1067357..1067547,1067679..1067796,1067879..1067936,1068038..1068091,1068214..1068318,1068570..1068729,1068800..1068974,1069051..1069400,1069492..1069888,1070017..1070139,1071501..1071611,1074002..1074116,1074402..1074565,1075452..1075520,1075625..1076269,1082174..1082325))
location: region:1066766-1082325:-1
so has part: feature:1082174-1082325:-1:exon
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urn:…
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urn:…
SIO_000300: 17
SIO_000628: feature:1066766-1067284:-1:exon

MAP7D1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: MAP7D1
product: MAP7 domain containing 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 58 samples with support for all annotated introns
transcript id: XM_041720740.1
SIO_010081: MAP7D1
subclass of: SO_0000673
so part of: MAP7D1
location: complement(join(1066766..1067284,1067357..1067547,1067679..1067796,1067879..1067963,1068038..1068091,1068214..1068318,1068570..1068729,1068800..1068974,1069051..1069400,1069492..1069888,1070017..1070139,1071501..1071611,1074002..1074116,1074402..1074565,1075452..1075520,1075625..1076269,1082174..1082325))
location: region:1066766-1082325:-1
so has part: feature:1082174-1082325:-1:exon
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urn:…
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urn:…
SIO_000300: 17
SIO_000628: feature:1066766-1067284:-1:exon

MAP7D1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: MAP7D1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MAP7 domain-containing protein 1 isoform X2
translation: MRAGGAPRAEAAAGGKPPSPMGDSVPPPSVPPPVPGGALQGERSFPQHDRPGPPDVIPSEKTIPPIPAAITPSEKIVSPVPAAVPPSQQPVMPHSESSPPQRDRPGPAALALPAQPVSPSPAALVPSAQSVPPQGDQSPPVPPKPPGMEHPKEEALPHTAGQPVPVHAAAPGSTDTPPHGSQPPAPAATEGAPPDAKSSLAATAGPSKDVSPRSSRPSPSPAASPRPKQDAQKAQARHKQAKERREERAKYLAAKRVLWLEKEEKARLLREKQLEERRKRLEEQRLRAEKRRAVLEERQRQKLEKNKERYEAAIQRSVKKTWAEIRQQRWSWAGALHHGSPAHKDGASRCSVSAVNLPKHVDSIINKRLSKSSATLWNSPSRNRSLQLSPWESSIVDRLMTPTLSFLARSRSAVTLAGNGKEQVPVCPRSASASPLSPCHNHRLPHRCWERRKAAAASPDVTPRRRTEPSPVSATSRRDPERQGGCGARRGLRPCPAPSADAIPACPRPEQKKKEKKEKDRENAKERSALSRERSLRKRQSLPAAQPRLLPAADSSPGPKNRPSSPATPKNRPSSPATPKNRPSSPATPKNRPSSPATPKARPASPSPALSSPHKPPLPRSAHSSPKVRARAREERGEQEGQAKARERKEEERGPAPPALPEPPKVPAEPTAGPPVPAAPGPVLASPPARPPAGTTDREEAARLLAEKRRQAREQREREERERREQEEQERRVQEERAQRAAEEQSRREALARQREEERRLQEEREAQERARAEREELERLQRQKEEAEARAREEAERQRLEREKHFQREEQERLERKKRLEEIMKRTRKSDAADTKTLTALLSLQRKDDKKVLNGKAAEQEDVPGREKHLGPIPKAEELPETETPSAGTPGGTKGLVGEGLQPSTKEAAALVNGVQPGKHENGFSGTEGSKELRDLSHHGGGPGSIIPFGDKEPFLKQAVVKPPQVTEVL
SIO_010081: MAP7D1
subclass of: SO_0000673
so part of: MAP7D1
location: complement(join(1067274..1067284,1067357..1067547,1067679..1067796,1067879..1067963,1068038..1068091,1068214..1068318,1068570..1068729,1068800..1068974,1069051..1069400,1069492..1069888,1070017..1070139,1071501..1071611,1074002..1074116,1074402..1074565,1075452..1075520,1075625..1076269,1082733..1082775))
location: region:1067274-1082775:-1
so has part: feature:1082733-1082775:-1:exon
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so has part: feature:1068038-1068091:-1:exon
so has part: feature:1067879-1067963:-1:exon
so has part: feature:1067679-1067796:-1:exon
so has part: feature:1067357-1067547:-1:exon
so has part: feature:1067274-1067284:-1:exon

XP_041576675.1
type: Protein
SIO_000068: ncbiprotein

position:1067274:-1
position: 1067274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1082775:-1
position: 1082775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1082733-1082775:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1075625-1076269:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1075452-1075520:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1074402-1074565:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1074002-1074116:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1071501-1071611:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1070017-1070139:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1069492-1069888:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1069051-1069400:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1068800-1068974:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1068570-1068729:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1068214-1068318:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1068038-1068091:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1067879-1067963:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1067679-1067796:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1067357-1067547:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1067274-1067284:-1:exon

MAP7D1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: MAP7D1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MAP7 domain-containing protein 1 isoform X8
translation: MERSCAGREPQPRPQPQPLGKPPSPMGDSVPPPSVPPPVPGGALQGERSFPQHDRPGPPDVIPSEKTIPPIPAAITPSEKIVSPVPAAVPPSQQPVMPHSESSPPQRDRPGPAALALPAQPVSPSPAALVPSAQSVPPQGDQSPPVPPKPPGMEHPKEEALPHTAGQPVPVHAAAPGSTDTPPHGSQPPAPAATEGAPPDAKSSLAATAGPSKDVSPRSSRPSPSPAASPRPKQDAQKAQARHKQAKERREERAKYLAAKRVLWLEKEEKARLLREKQLEERRKRLEEQRLRAEKRRAVLEERQRQKLEKNKERYEAAIQRSVKKTWAEIRQQRWSWAGALHHGSPAHKDDRSLQLSPWESSIVDRLMTPTLSFLARSRSAVTLAGNGKEQVPVCPRSASASPLSPCHNHRLPHRCWERRKAAAASPDVTPRRRTEPSPKKKEKKEKDRENAKERSALSRERSLRKRQSLPAAQPRLLPAADSSPGPKNRPSSPATPKNRPSSPATPKNRPSSPATPKNRPSSPATPKARPASPSPALSSPHKPPLPRSAHSSPKVRARAREERGEQEGQAKARERKEEERGPAPPALPEPPKVPAEPTAGPPVPAAPGPVLASPPARPPAGTTDREEAARLLAEKRRQAREQREREERERREQEEQERRVQEERAQRAAEEQSRREALARQREEERRLQEEREAQERARAEREELERLQRQKEEAEARAREEAERQRLEREKHFQREEQERLERKKRLEEIMKRTRKSDAADTKTLTALLSLQRKDDKKVLNGKAAEQEDVPGREKHLGPIPKAEELPETETPSAGTPGGTKGLVGEGLQPSTKEAAALVNGVQPGKHENGFSGTEGSKELRDLSHHGGGPGSIIPFGDKEPFLKQAVVKPPQVTEVL
SIO_010081: MAP7D1
subclass of: SO_0000673
so part of: MAP7D1
location: complement(join(1067274..1067284,1067357..1067547,1067679..1067796,1067879..1067963,1068038..1068091,1068214..1068318,1068570..1068729,1068800..1068974,1069051..1069400,1069492..1069625,1069746..1069888,1070017..1070139,1074002..1074116,1074402..1074565,1075452..1075520,1075625..1076269,1082174..1082231))
location: region:1067274-1082231:-1
so has part: feature:1082174-1082231:-1:exon
so has part: feature:1075625-1076269:-1:exon
so has part: feature:1075452-1075520:-1:exon
so has part: feature:1074402-1074565:-1:exon
so has part: feature:1074002-1074116:-1:exon
so has part: feature:1070017-1070139:-1:exon
so has part: feature:1069746-1069888:-1:exon
so has part: feature:1069492-1069625:-1:exon
so has part: feature:1069051-1069400:-1:exon
so has part: feature:1068800-1068974:-1:exon
so has part: feature:1068570-1068729:-1:exon
so has part: feature:1068214-1068318:-1:exon
so has part: feature:1068038-1068091:-1:exon
so has part: feature:1067879-1067963:-1:exon
so has part: feature:1067679-1067796:-1:exon
so has part: feature:1067357-1067547:-1:exon
so has part: feature:1067274-1067284:-1:exon

XP_041576680.1
type: Protein
SIO_000068: ncbiprotein

position:1082231:-1
position: 1082231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1082174-1082231:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1075625-1076269:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1075452-1075520:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1074402-1074565:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1074002-1074116:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1070017-1070139:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1069746-1069888:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1069492-1069625:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1069051-1069400:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1068800-1068974:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1068570-1068729:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1068214-1068318:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1068038-1068091:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1067879-1067963:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1067679-1067796:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1067357-1067547:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1067274-1067284:-1:exon

MAP7D1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: MAP7D1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MAP7 domain-containing protein 1 isoform X5
translation: MERSCAGREPQPRPQPQPLGKPPSPMGDSVPPPSVPPPVPGGALQGERSFPQHDRPGPPDVIPSEKTIPPIPAAITPSEKIVSPVPAAVPPSQQPVMPHSESSPPQRDRPGPAALALPAQPVSPSPAALVPSAQSVPPQGDQSPPVPPKPPGMEHPKEEALPHTAGQPVPVHAAAPGSTDTPPHGSQPPAPAATEGAPPDAKSSLAATAGPSKDVSPRSSRPSPSPAASPRPKQDAQKAQARHKQAKERREERAKYLAAKRVLWLEKEEKARLLREKQLEERRKRLEEQRLRAEKRRAVLEERQRQKLEKNKERYEAAIQRSVKKTWAEIRQQRWSWAGALHHGSPAHKDDRSLQLSPWESSIVDRLMTPTLSFLARSRSAVTLAGNGKEQVPVCPRSASASPLSPCHNHRLPHRCWERRKAAAASPDVTPRRRTEPSPVSATSRRDPERQGGCGARRGLRPCPAPSADAIPACPRPEQKKKEKKEKDRENAKERSALSRERSLRKRQSLPAAQPRLLPAADSSPGPKNRPSSPATPKNRPSSPATPKNRPSSPATPKNRPSSPATPKARPASPSPALSSPHKPPLPRSAHSSPKVRARAREERGEQEGQAKARERKEEERGPAPPALPEPPKVPAEPTAGPPVPAAPGPVLASPPARPPAGTTDREEAARLLAEKRRQAREQREREERERREQEEQERRVQEERAQRAAEEQSRREALARQREEERRLQEEREAQERARAEREELERLQRQKEEAEARAREEAERQRLEREKHFQREEQERLERKKRLEEIMKRTRKSDAADTKTLTALLSLQRKDDKKVLNGKAAEQEDVPGREKHLGPIPKAEELPETETPSAGTPGGTKGLVGEGLQPSTKEAAALVNGVQPGKHENGFSGTEGSKELRDLSHHGGGPGSIIPFGDKEPFLKQAVVKPPQVTEVL
SIO_010081: MAP7D1
subclass of: SO_0000673
so part of: MAP7D1
location: complement(join(1067274..1067284,1067357..1067547,1067679..1067796,1067879..1067963,1068038..1068091,1068214..1068318,1068570..1068729,1068800..1068974,1069051..1069400,1069492..1069888,1070017..1070139,1074002..1074116,1074402..1074565,1075452..1075520,1075625..1076269,1082174..1082231))
location: region:1067274-1082231:-1
so has part: feature:1082174-1082231:-1:exon
so has part: feature:1075625-1076269:-1:exon
so has part: feature:1075452-1075520:-1:exon
so has part: feature:1074402-1074565:-1:exon
so has part: feature:1074002-1074116:-1:exon
so has part: feature:1070017-1070139:-1:exon
so has part: feature:1069492-1069888:-1:exon
so has part: feature:1069051-1069400:-1:exon
so has part: feature:1068800-1068974:-1:exon
so has part: feature:1068570-1068729:-1:exon
so has part: feature:1068214-1068318:-1:exon
so has part: feature:1068038-1068091:-1:exon
so has part: feature:1067879-1067963:-1:exon
so has part: feature:1067679-1067796:-1:exon
so has part: feature:1067357-1067547:-1:exon
so has part: feature:1067274-1067284:-1:exon

XP_041576679.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1082174-1082231:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1075625-1076269:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1075452-1075520:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1074402-1074565:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1074002-1074116:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1070017-1070139:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1069492-1069888:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1069051-1069400:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1068800-1068974:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1068570-1068729:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1068214-1068318:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1068038-1068091:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1067879-1067963:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1067679-1067796:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1067357-1067547:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1067274-1067284:-1:exon

MAP7D1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: MAP7D1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MAP7 domain-containing protein 1 isoform X7
translation: MERSCAGREPQPRPQPQPLGKPPSPMGDSVPPPSVPPPVPGGALQGERSFPQHDRPGPPDVIPSEKTIPPIPAAITPSEKIVSPVPAAVPPSQQPVMPHSESSPPQRDRPGPAALALPAQPVSPSPAALVPSAQSVPPQGDQSPPVPPKPPGMEHPKEEALPHTAGQPVPVHAAAPGSTDTPPHGSQPPAPAATEGAPPDAKSSLAATAGPSKDVSPRSSRPSPSPAASPRPKQDAQKAQARHKQAKERREERAKYLAAKRVLWLEKEEKARLLREKQLEERRKRLEEQRLRAEKRRAVLEERQRQKLEKNKERYEAAIQRSVKKTWAEIRQQRWSWAGALHHGSPAHKDGASRCSVSAVNLPKHVDSIINKRLSKSSATLWNSPSRNRSLQLSPWESSIVDRLMTPTLSFLARSRSAVTLAGNGKEQVPVCPRSASASPLSPCHNHRLPHRCWERRKAAAASPDVTPRRRTEPSPKKKEKKEKDRENAKERSALSRERSLRKRQSLPAAQPRLLPAADSSPGPKNRPSSPATPKNRPSSPATPKNRPSSPATPKNRPSSPATPKARPASPSPALSSPHKPPLPRSAHSSPKVRARAREERGEQEGQAKARERKEEERGPAPPALPEPPKVPAEPTAGPPVPAAPGPVLASPPARPPAGTTDREEAARLLAEKRRQAREQREREERERREQEEQERRVQEERAQRAAEEQSRREALARQREEERRLQEEREAQERARAEREELERLQRQKEEAEARAREEAERQRLEREKHFQREEQERLERKKRLEEIMKRTRKSDAADTKRKDDKKVLNGKAAEQEDVPGREKHLGPIPKAEELPETETPSAGTPGGTKGLVGEGLQPSTKEAAALVNGVQPGKHENGFSGTEGSKELRDLSHHGGGPGSIIPFGDKEPFLKQAVVKPPQVTEVL
SIO_010081: MAP7D1
subclass of: SO_0000673
so part of: MAP7D1
location: complement(join(1067274..1067284,1067357..1067547,1067679..1067796,1067879..1067936,1068038..1068091,1068214..1068318,1068570..1068729,1068800..1068974,1069051..1069400,1069492..1069625,1069746..1069888,1070017..1070139,1071501..1071611,1074002..1074116,1074402..1074565,1075452..1075520,1075625..1076269,1082174..1082231))
location: region:1067274-1082231:-1
so has part: feature:1082174-1082231:-1:exon
so has part: feature:1075625-1076269:-1:exon
so has part: feature:1075452-1075520:-1:exon
so has part: feature:1074402-1074565:-1:exon
so has part: feature:1074002-1074116:-1:exon
so has part: feature:1071501-1071611:-1:exon
so has part: feature:1070017-1070139:-1:exon
so has part: feature:1069746-1069888:-1:exon
so has part: feature:1069492-1069625:-1:exon
so has part: feature:1069051-1069400:-1:exon
so has part: feature:1068800-1068974:-1:exon
so has part: feature:1068570-1068729:-1:exon
so has part: feature:1068214-1068318:-1:exon
so has part: feature:1068038-1068091:-1:exon
so has part: feature:1067879-1067936:-1:exon
so has part: feature:1067679-1067796:-1:exon
so has part: feature:1067357-1067547:-1:exon
so has part: feature:1067274-1067284:-1:exon

XP_030146212.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1082174-1082231:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1075625-1076269:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1075452-1075520:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1074402-1074565:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1074002-1074116:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1071501-1071611:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1070017-1070139:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1069746-1069888:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1069492-1069625:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1069051-1069400:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1068800-1068974:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1068570-1068729:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1068214-1068318:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1068038-1068091:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1067879-1067936:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1067679-1067796:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1067357-1067547:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1067274-1067284:-1:exon

MAP7D1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: MAP7D1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MAP7 domain-containing protein 1 isoform X6
translation: MERSCAGREPQPRPQPQPLGKPPSPMGDSVPPPSVPPPVPGGALQGERSFPQHDRPGPPDVIPSEKTIPPIPAAITPSEKIVSPVPAAVPPSQQPVMPHSESSPPQRDRPGPAALALPAQPVSPSPAALVPSAQSVPPQGDQSPPVPPKPPGMEHPKEEALPHTAGQPVPVHAAAPGSTDTPPHGSQPPAPAATEGAPPDAKSSLAATAGPSKDVSPRSSRPSPSPAASPRPKQDAQKAQARHKQAKERREERAKYLAAKRVLWLEKEEKARLLREKQLEERRKRLEEQRLRAEKRRAVLEERQRQKLEKNKERYEAAIQRSVKKTWAEIRQQRWSWAGALHHGSPAHKDGASRCSVSAVNLPKHVDSIINKRLSKSSATLWNSPSRNRSLQLSPWESSIVDRLMTPTLSFLARSRSAVTLAGNGKEQVPVCPRSASASPLSPCHNHRLPHRCWERRKAAAASPDVTPRRRTEPSPKKKEKKEKDRENAKERSALSRERSLRKRQSLPAAQPRLLPAADSSPGPKNRPSSPATPKNRPSSPATPKNRPSSPATPKNRPSSPATPKARPASPSPALSSPHKPPLPRSAHSSPKVRARAREERGEQEGQAKARERKEEERGPAPPALPEPPKVPAEPTAGPPVPAAPGPVLASPPARPPAGTTDREEAARLLAEKRRQAREQREREERERREQEEQERRVQEERAQRAAEEQSRREALARQREEERRLQEEREAQERARAEREELERLQRQKEEAEARAREEAERQRLEREKHFQREEQERLERKKRLEEIMKRTRKSDAADTKTLTALLSLQRKDDKKVLNGKAAEQEDVPGREKHLGPIPKAEELPETETPSAGTPGGTKGLVGEGLQPSTKEAAALVNGVQPGKHENGFSGTEGSKELRDLSHHGGGPGSIIPFGDKEPFLKQAVVKPPQVTEVL
SIO_010081: MAP7D1
subclass of: SO_0000673
so part of: MAP7D1
location: complement(join(1067274..1067284,1067357..1067547,1067679..1067796,1067879..1067963,1068038..1068091,1068214..1068318,1068570..1068729,1068800..1068974,1069051..1069400,1069492..1069625,1069746..1069888,1070017..1070139,1071501..1071611,1074002..1074116,1074402..1074565,1075452..1075520,1075625..1076269,1082174..1082231))
location: region:1067274-1082231:-1
so has part: feature:1082174-1082231:-1:exon
so has part: feature:1075625-1076269:-1:exon
so has part: feature:1075452-1075520:-1:exon
so has part: feature:1074402-1074565:-1:exon
so has part: feature:1074002-1074116:-1:exon
so has part: feature:1071501-1071611:-1:exon
so has part: feature:1070017-1070139:-1:exon
so has part: feature:1069746-1069888:-1:exon
so has part: feature:1069492-1069625:-1:exon
so has part: feature:1069051-1069400:-1:exon
so has part: feature:1068800-1068974:-1:exon
so has part: feature:1068570-1068729:-1:exon
so has part: feature:1068214-1068318:-1:exon
so has part: feature:1068038-1068091:-1:exon
so has part: feature:1067879-1067963:-1:exon
so has part: feature:1067679-1067796:-1:exon
so has part: feature:1067357-1067547:-1:exon
so has part: feature:1067274-1067284:-1:exon

XP_030146210.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1082174-1082231:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1075625-1076269:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1075452-1075520:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1074402-1074565:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1074002-1074116:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1071501-1071611:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1070017-1070139:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1069746-1069888:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1069492-1069625:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1069051-1069400:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1068800-1068974:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1068570-1068729:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1068214-1068318:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1068038-1068091:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1067879-1067963:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1067679-1067796:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1067357-1067547:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1067274-1067284:-1:exon

MAP7D1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: MAP7D1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MAP7 domain-containing protein 1 isoform X3
translation: MERSCAGREPQPRPQPQPLGKPPSPMGDSVPPPSVPPPVPGGALQGERSFPQHDRPGPPDVIPSEKTIPPIPAAITPSEKIVSPVPAAVPPSQQPVMPHSESSPPQRDRPGPAALALPAQPVSPSPAALVPSAQSVPPQGDQSPPVPPKPPGMEHPKEEALPHTAGQPVPVHAAAPGSTDTPPHGSQPPAPAATEGAPPDAKSSLAATAGPSKDVSPRSSRPSPSPAASPRPKQDAQKAQARHKQAKERREERAKYLAAKRVLWLEKEEKARLLREKQLEERRKRLEEQRLRAEKRRAVLEERQRQKLEKNKERYEAAIQRSVKKTWAEIRQQRWSWAGALHHGSPAHKDGASRCSVSAVNLPKHVDSIINKRLSKSSATLWNSPSRNRSLQLSPWESSIVDRLMTPTLSFLARSRSAVTLAGNGKEQVPVCPRSASASPLSPCHNHRLPHRCWERRKAAAASPDVTPRRRTEPSPVSATSRRDPERQGGCGARRGLRPCPAPSADAIPACPRPEQKKKEKKEKDRENAKERSALSRERSLRKRQSLPAAQPRLLPAADSSPGPKNRPSSPATPKNRPSSPATPKNRPSSPATPKNRPSSPATPKARPASPSPALSSPHKPPLPRSAHSSPKVRARAREERGEQEGQAKARERKEEERGPAPPALPEPPKVPAEPTAGPPVPAAPGPVLASPPARPPAGTTDREEAARLLAEKRRQAREQREREERERREQEEQERRVQEERAQRAAEEQSRREALARQREEERRLQEEREAQERARAEREELERLQRQKEEAEARAREEAERQRLEREKHFQREEQERLERKKRLEEIMKRTRKSDAADTKRKDDKKVLNGKAAEQEDVPGREKHLGPIPKAEELPETETPSAGTPGGTKGLVGEGLQPSTKEAAALVNGVQPGKHENGFSGTEGSKELRDLSHHGGGPGSIIPFGDKEPFLKQAVVKPPQVTEVL
SIO_010081: MAP7D1
subclass of: SO_0000673
so part of: MAP7D1
location: complement(join(1067274..1067284,1067357..1067547,1067679..1067796,1067879..1067936,1068038..1068091,1068214..1068318,1068570..1068729,1068800..1068974,1069051..1069400,1069492..1069888,1070017..1070139,1071501..1071611,1074002..1074116,1074402..1074565,1075452..1075520,1075625..1076269,1082174..1082231))
location: region:1067274-1082231:-1
so has part: feature:1082174-1082231:-1:exon
so has part: feature:1075625-1076269:-1:exon
so has part: feature:1075452-1075520:-1:exon
so has part: feature:1074402-1074565:-1:exon
so has part: feature:1074002-1074116:-1:exon
so has part: feature:1071501-1071611:-1:exon
so has part: feature:1070017-1070139:-1:exon
so has part: feature:1069492-1069888:-1:exon
so has part: feature:1069051-1069400:-1:exon
so has part: feature:1068800-1068974:-1:exon
so has part: feature:1068570-1068729:-1:exon
so has part: feature:1068214-1068318:-1:exon
so has part: feature:1068038-1068091:-1:exon
so has part: feature:1067879-1067936:-1:exon
so has part: feature:1067679-1067796:-1:exon
so has part: feature:1067357-1067547:-1:exon
so has part: feature:1067274-1067284:-1:exon

XP_041576676.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1082174-1082231:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1075625-1076269:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1075452-1075520:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1074402-1074565:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1074002-1074116:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1071501-1071611:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1070017-1070139:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1069492-1069888:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1069051-1069400:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1068800-1068974:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1068570-1068729:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1068214-1068318:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1068038-1068091:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1067879-1067936:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1067679-1067796:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1067357-1067547:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1067274-1067284:-1:exon

MAP7D1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: MAP7D1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MAP7 domain-containing protein 1 isoform X1
translation: MERSCAGREPQPRPQPQPLGKPPSPMGDSVPPPSVPPPVPGGALQGERSFPQHDRPGPPDVIPSEKTIPPIPAAITPSEKIVSPVPAAVPPSQQPVMPHSESSPPQRDRPGPAALALPAQPVSPSPAALVPSAQSVPPQGDQSPPVPPKPPGMEHPKEEALPHTAGQPVPVHAAAPGSTDTPPHGSQPPAPAATEGAPPDAKSSLAATAGPSKDVSPRSSRPSPSPAASPRPKQDAQKAQARHKQAKERREERAKYLAAKRVLWLEKEEKARLLREKQLEERRKRLEEQRLRAEKRRAVLEERQRQKLEKNKERYEAAIQRSVKKTWAEIRQQRWSWAGALHHGSPAHKDGASRCSVSAVNLPKHVDSIINKRLSKSSATLWNSPSRNRSLQLSPWESSIVDRLMTPTLSFLARSRSAVTLAGNGKEQVPVCPRSASASPLSPCHNHRLPHRCWERRKAAAASPDVTPRRRTEPSPVSATSRRDPERQGGCGARRGLRPCPAPSADAIPACPRPEQKKKEKKEKDRENAKERSALSRERSLRKRQSLPAAQPRLLPAADSSPGPKNRPSSPATPKNRPSSPATPKNRPSSPATPKNRPSSPATPKARPASPSPALSSPHKPPLPRSAHSSPKVRARAREERGEQEGQAKARERKEEERGPAPPALPEPPKVPAEPTAGPPVPAAPGPVLASPPARPPAGTTDREEAARLLAEKRRQAREQREREERERREQEEQERRVQEERAQRAAEEQSRREALARQREEERRLQEEREAQERARAEREELERLQRQKEEAEARAREEAERQRLEREKHFQREEQERLERKKRLEEIMKRTRKSDAADTKTLTALLSLQRKDDKKVLNGKAAEQEDVPGREKHLGPIPKAEELPETETPSAGTPGGTKGLVGEGLQPSTKEAAALVNGVQPGKHENGFSGTEGSKELRDLSHHGGGPGSIIPFGDKEPFLKQAVVKPPQVTEVL
SIO_010081: MAP7D1
subclass of: SO_0000673
so part of: MAP7D1
location: complement(join(1067274..1067284,1067357..1067547,1067679..1067796,1067879..1067963,1068038..1068091,1068214..1068318,1068570..1068729,1068800..1068974,1069051..1069400,1069492..1069888,1070017..1070139,1071501..1071611,1074002..1074116,1074402..1074565,1075452..1075520,1075625..1076269,1082174..1082231))
location: region:1067274-1082231:-1
so has part: feature:1082174-1082231:-1:exon
so has part: feature:1075625-1076269:-1:exon
so has part: feature:1075452-1075520:-1:exon
so has part: feature:1074402-1074565:-1:exon
so has part: feature:1074002-1074116:-1:exon
so has part: feature:1071501-1071611:-1:exon
so has part: feature:1070017-1070139:-1:exon
so has part: feature:1069492-1069888:-1:exon
so has part: feature:1069051-1069400:-1:exon
so has part: feature:1068800-1068974:-1:exon
so has part: feature:1068570-1068729:-1:exon
so has part: feature:1068214-1068318:-1:exon
so has part: feature:1068038-1068091:-1:exon
so has part: feature:1067879-1067963:-1:exon
so has part: feature:1067679-1067796:-1:exon
so has part: feature:1067357-1067547:-1:exon
so has part: feature:1067274-1067284:-1:exon

XP_041576674.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1082174-1082231:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1075625-1076269:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1075452-1075520:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1074402-1074565:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1074002-1074116:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1071501-1071611:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1070017-1070139:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1069492-1069888:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1069051-1069400:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1068800-1068974:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1068570-1068729:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1068214-1068318:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1068038-1068091:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1067879-1067963:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1067679-1067796:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1067357-1067547:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1067274-1067284:-1:exon

MAP7D1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: MAP7D1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MAP7 domain-containing protein 1 isoform X4
translation: MGDSVPPPSVPPPVPGGALQGERSFPQHDRPGPPDVIPSEKTIPPIPAAITPSEKIVSPVPAAVPPSQQPVMPHSESSPPQRDRPGPAALALPAQPVSPSPAALVPSAQSVPPQGDQSPPVPPKPPGMEHPKEEALPHTAGQPVPVHAAAPGSTDTPPHGSQPPAPAATEGAPPDAKSSLAATAGPSKDVSPRSSRPSPSPAASPRPKQDAQKAQARHKQAKERREERAKYLAAKRVLWLEKEEKARLLREKQLEERRKRLEEQRLRAEKRRAVLEERQRQKLEKNKERYEAAIQRSVKKTWAEIRQQRWSWAGALHHGSPAHKDGASRCSVSAVNLPKHVDSIINKRLSKSSATLWNSPSRNRSLQLSPWESSIVDRLMTPTLSFLARSRSAVTLAGNGKEQVPVCPRSASASPLSPCHNHRLPHRCWERRKAAAASPDVTPRRRTEPSPVSATSRRDPERQGGCGARRGLRPCPAPSADAIPACPRPEQKKKEKKEKDRENAKERSALSRERSLRKRQSLPAAQPRLLPAADSSPGPKNRPSSPATPKNRPSSPATPKNRPSSPATPKNRPSSPATPKARPASPSPALSSPHKPPLPRSAHSSPKVRARAREERGEQEGQAKARERKEEERGPAPPALPEPPKVPAEPTAGPPVPAAPGPVLASPPARPPAGTTDREEAARLLAEKRRQAREQREREERERREQEEQERRVQEERAQRAAEEQSRREALARQREEERRLQEEREAQERARAEREELERLQRQKEEAEARAREEAERQRLEREKHFQREEQERLERKKRLEEIMKRTRKSDAADTKTLTALLSLQRKDDKKVLNGKAAEQEDVPGREKHLGPIPKAEELPETETPSAGTPGGTKGLVGEGLQPSTKEAAALVNGVQPGKHENGFSGTEGSKELRDLSHHGGGPGSIIPFGDKEPFLKQAVVKPPQVTEVL
SIO_010081: MAP7D1
subclass of: SO_0000673
so part of: MAP7D1
location: complement(join(1067274..1067284,1067357..1067547,1067679..1067796,1067879..1067963,1068038..1068091,1068214..1068318,1068570..1068729,1068800..1068974,1069051..1069400,1069492..1069888,1070017..1070139,1071501..1071611,1074002..1074116,1074402..1074565,1075452..1075520,1075625..1076252))
location: region:1067274-1076252:-1
so has part: feature:1075625-1076252:-1:exon
so has part: feature:1075452-1075520:-1:exon
so has part: feature:1074402-1074565:-1:exon
so has part: feature:1074002-1074116:-1:exon
so has part: feature:1071501-1071611:-1:exon
so has part: feature:1070017-1070139:-1:exon
so has part: feature:1069492-1069888:-1:exon
so has part: feature:1069051-1069400:-1:exon
so has part: feature:1068800-1068974:-1:exon
so has part: feature:1068570-1068729:-1:exon
so has part: feature:1068214-1068318:-1:exon
so has part: feature:1068038-1068091:-1:exon
so has part: feature:1067879-1067963:-1:exon
so has part: feature:1067679-1067796:-1:exon
so has part: feature:1067357-1067547:-1:exon
so has part: feature:1067274-1067284:-1:exon

XP_041576677.1
type: Protein
SIO_000068: ncbiprotein

position:1076252:-1
position: 1076252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1075625-1076252:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1075452-1075520:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1074402-1074565:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1074002-1074116:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1071501-1071611:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1070017-1070139:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1069492-1069888:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1069051-1069400:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1068800-1068974:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1068570-1068729:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1068214-1068318:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1068038-1068091:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1067879-1067963:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1067679-1067796:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1067357-1067547:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1067274-1067284:-1:exon

MAP7D1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: MAP7D1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MAP7 domain-containing protein 1 isoform X4
translation: MGDSVPPPSVPPPVPGGALQGERSFPQHDRPGPPDVIPSEKTIPPIPAAITPSEKIVSPVPAAVPPSQQPVMPHSESSPPQRDRPGPAALALPAQPVSPSPAALVPSAQSVPPQGDQSPPVPPKPPGMEHPKEEALPHTAGQPVPVHAAAPGSTDTPPHGSQPPAPAATEGAPPDAKSSLAATAGPSKDVSPRSSRPSPSPAASPRPKQDAQKAQARHKQAKERREERAKYLAAKRVLWLEKEEKARLLREKQLEERRKRLEEQRLRAEKRRAVLEERQRQKLEKNKERYEAAIQRSVKKTWAEIRQQRWSWAGALHHGSPAHKDGASRCSVSAVNLPKHVDSIINKRLSKSSATLWNSPSRNRSLQLSPWESSIVDRLMTPTLSFLARSRSAVTLAGNGKEQVPVCPRSASASPLSPCHNHRLPHRCWERRKAAAASPDVTPRRRTEPSPVSATSRRDPERQGGCGARRGLRPCPAPSADAIPACPRPEQKKKEKKEKDRENAKERSALSRERSLRKRQSLPAAQPRLLPAADSSPGPKNRPSSPATPKNRPSSPATPKNRPSSPATPKNRPSSPATPKARPASPSPALSSPHKPPLPRSAHSSPKVRARAREERGEQEGQAKARERKEEERGPAPPALPEPPKVPAEPTAGPPVPAAPGPVLASPPARPPAGTTDREEAARLLAEKRRQAREQREREERERREQEEQERRVQEERAQRAAEEQSRREALARQREEERRLQEEREAQERARAEREELERLQRQKEEAEARAREEAERQRLEREKHFQREEQERLERKKRLEEIMKRTRKSDAADTKTLTALLSLQRKDDKKVLNGKAAEQEDVPGREKHLGPIPKAEELPETETPSAGTPGGTKGLVGEGLQPSTKEAAALVNGVQPGKHENGFSGTEGSKELRDLSHHGGGPGSIIPFGDKEPFLKQAVVKPPQVTEVL
SIO_010081: MAP7D1
subclass of: SO_0000673
so part of: MAP7D1
location: complement(join(1067274..1067284,1067357..1067547,1067679..1067796,1067879..1067963,1068038..1068091,1068214..1068318,1068570..1068729,1068800..1068974,1069051..1069400,1069492..1069888,1070017..1070139,1071501..1071611,1074002..1074116,1074402..1074565,1075452..1075520,1075625..1076252))
location: region:1067274-1076252:-1
so has part: feature:1075625-1076252:-1:exon
so has part: feature:1075452-1075520:-1:exon
so has part: feature:1074402-1074565:-1:exon
so has part: feature:1074002-1074116:-1:exon
so has part: feature:1071501-1071611:-1:exon
so has part: feature:1070017-1070139:-1:exon
so has part: feature:1069492-1069888:-1:exon
so has part: feature:1069051-1069400:-1:exon
so has part: feature:1068800-1068974:-1:exon
so has part: feature:1068570-1068729:-1:exon
so has part: feature:1068214-1068318:-1:exon
so has part: feature:1068038-1068091:-1:exon
so has part: feature:1067879-1067963:-1:exon
so has part: feature:1067679-1067796:-1:exon
so has part: feature:1067357-1067547:-1:exon
so has part: feature:1067274-1067284:-1:exon

XP_041576678.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1075625-1076252:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1075452-1075520:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1074402-1074565:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1074002-1074116:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1071501-1071611:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1070017-1070139:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1069492-1069888:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1069051-1069400:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1068800-1068974:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1068570-1068729:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1068214-1068318:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1068038-1068091:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1067879-1067963:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1067679-1067796:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1067357-1067547:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1067274-1067284:-1:exon

LOC100221865
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC100221865
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1085417..1090201)
location: region:1085417-1090201:-1
so has part: feature:1085417-1090201:-1:exon
subclass of: SO_0000010

100221865
type: Gene
SIO_000068: ncbigene

position:1085417:-1
position: 1085417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1090201:-1
position: 1090201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1085417-1090201:-1:exon

LOC100221865
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC100221865
product: probable beta-D-xylosidase 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 57 samples with support for all annotated introns
transcript id: XM_030290410.3
SIO_010081: LOC100221865
subclass of: SO_0000673
so part of: LOC100221865
location: complement(join(1085417..1085808,1085926..1086132,1086267..1086475,1086589..1086678,1086839..1086975,1087163..1087248,1087357..1087581,1087676..1087779,1087864..1088021,1088183..1088274,1088352..1088522,1088665..1088824,1088921..1089081,1089149..1090201))
location: region:1085417-1090201:-1
so has part: feature:1089149-1090201:-1:exon
so has part: feature:1088921-1089081:-1:exon
so has part: feature:1088665-1088824:-1:exon
so has part: feature:1088352-1088522:-1:exon
so has part: feature:1088183-1088274:-1:exon
so has part: feature:1087864-1088021:-1:exon
so has part: feature:1087676-1087779:-1:exon
so has part: feature:1087357-1087581:-1:exon
so has part: feature:1087163-1087248:-1:exon
so has part: feature:1086839-1086975:-1:exon
so has part: feature:1086589-1086678:-1:exon
so has part: feature:1086267-1086475:-1:exon
so has part: feature:1085926-1086132:-1:exon
so has part: feature:1085417-1085808:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1089149-1090201:-1:exon

position:1089149:-1
position: 1089149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1088921-1089081:-1:exon

position:1088921:-1
position: 1088921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1089081:-1
position: 1089081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1088665-1088824:-1:exon

position:1088665:-1
position: 1088665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1088824:-1
position: 1088824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1088352-1088522:-1:exon

position:1088352:-1
position: 1088352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1088522:-1
position: 1088522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1088183-1088274:-1:exon

position:1088183:-1
position: 1088183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1088274:-1
position: 1088274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1087864-1088021:-1:exon

position:1087864:-1
position: 1087864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1088021:-1
position: 1088021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1087676-1087779:-1:exon

position:1087676:-1
position: 1087676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1087779:-1
position: 1087779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1087357-1087581:-1:exon

position:1087357:-1
position: 1087357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1087581:-1
position: 1087581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1087163-1087248:-1:exon

position:1087163:-1
position: 1087163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1087248:-1
position: 1087248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1086839-1086975:-1:exon

position:1086839:-1
position: 1086839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1086975:-1
position: 1086975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1086589-1086678:-1:exon

position:1086589:-1
position: 1086589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1086678:-1
position: 1086678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1086267-1086475:-1:exon

position:1086267:-1
position: 1086267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1086475:-1
position: 1086475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1085926-1086132:-1:exon

position:1085926:-1
position: 1085926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1086132:-1
position: 1086132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1085417-1085808:-1:exon

position:1085808:-1
position: 1085808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100221865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC100221865
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable beta-D-xylosidase 2
translation: MSGTQGTALASQSVCAITPGEHSRSFPGGAVTAPRPRARAEPAPLQPRAPRAGLTAPGGSAGSRPHTGDAPGDGRNRNPAAGLGARRPSHTDPAARGEIRKLTPGATGTRQRPRSPWPVPSYRAPPRPVGAGRRQRAPPRSTALVAPGPGRAEPCKSREPSRAMPCGPSRAVPCKSRVPSRAEPCGSREPSRAEPCGSREPSRAEPCGSREPSRAMLCGPSRAEPCGSREPSRAVPCKSREPSRAMLCVPSRAEPCGSREPSRAMACGSREPSRAVPCGSREPSRAVPCGALPAAALALRLLALSAALGAGPVRAQPFPFRDPSLPWQRRLDDLLGRLSPAELVLQVARGGAMGNGPAPPIPRLGIAPYNWNTECLRGDGEAPGWATAFPQALGLAAAFSPELIYRVANATATEVRAKHNSFAAAGRYSDHTGLSCFSPVLNIMRHPLWGRNQETYGEDPFLSGELARSFVQGLQGPHPRYVKASAGCKHFSVHGGPENIPVSRLSFDAKVLERDWRMTFLPQFQACVRAGSYSFMCSYNRINGVPACANKKLLTDILRGEWGFDGYVVSDEGAVELIMLGHHYTRSFLETAVASVNAGCNLELSYGMRNNVFMRIPEALAMGNITLQMLRDRVRPLFYTRMRLGEFDPPAMNPYSSLDLSVVQSPEHRNLSLEAAVKSFVLLKNVRGTLPLKAQDLSSQHLAVVGPFADNPRVLFGDYAPVPEPRYIYTPRRGLEMLGANVSFAAGCSEPRCQRYSRAELVKVVGAADVVLVCLGTGVDVETEAKDRSDLSLPGHQLELLQDAVQAAAGRPVILLLFNAGPLDVSWAQAHDGVGAILACFFPAQATGLAIARVLLGEAGASPAGRLPATWPAGMHQVPPMENYTMEGRTYRYYGQEAPLYPFGYGLSYTTFRYRDLVLSPPVLPLCANLSVSVVLENTGLRDSEEVVQLYLRWEHSSVPVPRWQLVAFRRVAVPAGREAKLSFQVLAEQRAVWAQHWHLEPGTFTLFAGGQQPGQKRRVPSEVLSARFSVTGTARPLRTC
SIO_010081: LOC100221865
subclass of: SO_0000673
so part of: LOC100221865
location: complement(join(1085521..1085808,1085926..1086132,1086267..1086475,1086589..1086678,1086839..1086975,1087163..1087248,1087357..1087581,1087676..1087779,1087864..1088021,1088183..1088274,1088352..1088522,1088665..1088824,1088921..1089081,1089149..1090186))
location: region:1085521-1090186:-1
so has part: feature:1089149-1090186:-1:exon
so has part: feature:1088921-1089081:-1:exon
so has part: feature:1088665-1088824:-1:exon
so has part: feature:1088352-1088522:-1:exon
so has part: feature:1088183-1088274:-1:exon
so has part: feature:1087864-1088021:-1:exon
so has part: feature:1087676-1087779:-1:exon
so has part: feature:1087357-1087581:-1:exon
so has part: feature:1087163-1087248:-1:exon
so has part: feature:1086839-1086975:-1:exon
so has part: feature:1086589-1086678:-1:exon
so has part: feature:1086267-1086475:-1:exon
so has part: feature:1085926-1086132:-1:exon
so has part: feature:1085521-1085808:-1:exon

XP_030146270.3
type: Protein
SIO_000068: ncbiprotein

position:1085521:-1
position: 1085521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1090186:-1
position: 1090186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1089149-1090186:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1088921-1089081:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1088665-1088824:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1088352-1088522:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1088183-1088274:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1087864-1088021:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1087676-1087779:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1087357-1087581:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1087163-1087248:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1086839-1086975:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1086589-1086678:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1086267-1086475:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1085926-1086132:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1085521-1085808:-1:exon

TRAPPC3
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: TRAPPC3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1092309..1099312
location: region:1092309-1099312:1
so has part: feature:1092309-1099312:1:exon
subclass of: SO_0000010

100232442
type: Gene
SIO_000068: ncbigene

position:1092309:1
position: 1092309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1099312:1
position: 1099312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1092309-1099312:1:exon

TRAPPC3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: TRAPPC3
product: trafficking protein particle complex subunit 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 ESTs, 5 long SRA reads, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 167 samples with support for all annotated introns
transcript id: XM_002198474.6
SIO_010081: TRAPPC3
subclass of: SO_0000673
so part of: TRAPPC3
location: join(1092309..1092432,1095536..1095633,1096729..1096828,1097096..1097278,1097728..1099312)
location: region:1092309-1099312:1
so has part: feature:1092309-1092432:1:exon
so has part: feature:1095536-1095633:1:exon
so has part: feature:1096729-1096828:1:exon
so has part: feature:1097096-1097278:1:exon
so has part: feature:1097728-1099312:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1092309-1092432:1:exon

position:1092432:1
position: 1092432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1095536-1095633:1:exon

position:1095536:1
position: 1095536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1095633:1
position: 1095633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1096729-1096828:1:exon

position:1096729:1
position: 1096729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1096828:1
position: 1096828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1097096-1097278:1:exon

position:1097096:1
position: 1097096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1097278:1
position: 1097278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1097728-1099312:1:exon

position:1097728:1
position: 1097728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TRAPPC3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: TRAPPC3
product: trafficking protein particle complex subunit 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, 2 long SRA reads, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 101 samples with support for all annotated introns
transcript id: XM_012570673.4
SIO_010081: TRAPPC3
subclass of: SO_0000673
so part of: TRAPPC3
location: join(1092330..1092432,1093924..1093971,1095536..1095633,1096729..1096828,1097096..1097278,1097728..1099312)
location: region:1092330-1099312:1
so has part: feature:1092330-1092432:1:exon
so has part: feature:1093924-1093971:1:exon
so has part: feature:1095536-1095633:1:exon
so has part: feature:1096729-1096828:1:exon
so has part: feature:1097096-1097278:1:exon
so has part: feature:1097728-1099312:1:exon

position:1092330:1
position: 1092330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1092330-1092432:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1093924-1093971:1:exon

position:1093924:1
position: 1093924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1093971:1
position: 1093971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1095536-1095633:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1096729-1096828:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1097096-1097278:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1097728-1099312:1:exon

TRAPPC3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: TRAPPC3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: trafficking protein particle complex subunit 3 isoform X1
translation: MSRQGGRGTESKKMYWYLPFISPSASLQLMNSELFTLTYGALVTQLCKDYENDDDVNKQLDKMGYNIGVRLIEDFLARSNVGRCHDFRETADVIAKIAFKMYLGITPSITNWSPGGDEFSLILENNPLVDFVELPDNHSTLIYSNLLCGVLRGALEMVQMAVDVKFVQDTLKGDSVTEIRMKFIRRIEDNLPAGEE
SIO_010081: TRAPPC3
subclass of: SO_0000673
so part of: TRAPPC3
location: join(1092391..1092432,1093924..1093971,1095536..1095633,1096729..1096828,1097096..1097278,1097728..1097847)
location: region:1092391-1097847:1
so has part: feature:1092391-1092432:1:exon
so has part: feature:1093924-1093971:1:exon
so has part: feature:1095536-1095633:1:exon
so has part: feature:1096729-1096828:1:exon
so has part: feature:1097096-1097278:1:exon
so has part: feature:1097728-1097847:1:exon

XP_012426127.4
type: Protein
SIO_000068: ncbiprotein

position:1092391:1
position: 1092391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1097847:1
position: 1097847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1092391-1092432:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1093924-1093971:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1095536-1095633:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1096729-1096828:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1097096-1097278:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1097728-1097847:1:exon

TRAPPC3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: TRAPPC3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: trafficking protein particle complex subunit 3 isoform X2
translation: MSRQGGRGTESKKMNSELFTLTYGALVTQLCKDYENDDDVNKQLDKMGYNIGVRLIEDFLARSNVGRCHDFRETADVIAKIAFKMYLGITPSITNWSPGGDEFSLILENNPLVDFVELPDNHSTLIYSNLLCGVLRGALEMVQMAVDVKFVQDTLKGDSVTEIRMKFIRRIEDNLPAGEE
SIO_010081: TRAPPC3
subclass of: SO_0000673
so part of: TRAPPC3
location: join(1092391..1092432,1095536..1095633,1096729..1096828,1097096..1097278,1097728..1097847)
location: region:1092391-1097847:1
so has part: feature:1092391-1092432:1:exon
so has part: feature:1095536-1095633:1:exon
so has part: feature:1096729-1096828:1:exon
so has part: feature:1097096-1097278:1:exon
so has part: feature:1097728-1097847:1:exon

XP_002198510.4
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1092391-1092432:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1095536-1095633:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1096729-1096828:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1097096-1097278:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1097728-1097847:1:exon

COL8A2
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: COL8A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1113507..1143440
location: region:1113507-1143440:1
so has part: feature:1113507-1143440:1:exon
subclass of: SO_0000010

100231380
type: Gene
SIO_000068: ncbigene

position:1113507:1
position: 1113507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1143440:1
position: 1143440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1113507-1143440:1:exon

COL8A2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: COL8A2
product: collagen type VIII alpha 2 chain, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 45 samples with support for all annotated introns
transcript id: XM_030290495.3
SIO_010081: COL8A2
subclass of: SO_0000673
so part of: COL8A2
location: join(1113507..1113560,1134145..1134335,1138689..1143440)
location: region:1113507-1143440:1
so has part: feature:1113507-1113560:1:exon
so has part: feature:1134145-1134335:1:exon
so has part: feature:1138689-1143440:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1113507-1113560:1:exon

position:1113560:1
position: 1113560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1134145-1134335:1:exon

position:1134145:1
position: 1134145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1134335:1
position: 1134335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1138689-1143440:1:exon

position:1138689:1
position: 1138689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

COL8A2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: COL8A2
product: collagen type VIII alpha 2 chain, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_041720785.1
SIO_010081: COL8A2
subclass of: SO_0000673
so part of: COL8A2
location: join(1130148..1130380,1134145..1134335,1138689..1143440)
location: region:1130148-1143440:1
so has part: feature:1130148-1130380:1:exon
so has part: feature:1134145-1134335:1:exon
so has part: feature:1138689-1143440:1:exon

position:1130148:1
position: 1130148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1130148-1130380:1:exon

position:1130380:1
position: 1130380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1134145-1134335:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1138689-1143440:1:exon

COL8A2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: COL8A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: collagen alpha-2(VIII) chain
translation: MLPDAVALLVTLGTMVMVMGPGSAAGGGVGGYAQVKYMQPMVKGPLGPPFREGKGQYLDMPPLLPMDLKGEPGPPGKPGPRGPPGPPGYPGKPGTGKPGMHGQPGPAGPPGFSGIGKPGIPGLPGKVGMKGMPGAKGEPGMRGEQGPRGLPGPPGLPGPAGLSVNGKPGPQGGPGLPGFRGEPGPKGEPGPRGERGMKGENGVGKPGLPGPRGNGGPPGPAGPPGPAGVGKPGLDGLPGAPGDKGDMGPPGGPGVAGEPGPVGPRGPPGIDGIGVPGVAGVPGIQGPMGPKGEPGIRGLPGMPGPTGYGKPGMPGLKGDRGQPGAQGAVGDKGEPGVDGEPGEPGPAGIIGPPGLPGSMGLPGKHGLPGPKGDVGPSGPPGMPGMRGDQGPNGFAGKPGVPGERGLPGSLGPPGPTGPKGEPGFIGLPGVPGLTGGPGPKGDGGIPGQPGLRGPSGIPGLQGPAGPMGPQGLPGLKGEPGLPGIPGEGKTGEPGMAGPIGPPGMPGTPGLNGPPGPPGPPGPPGAPGVLDETGIAGLHLPDGGVEGAVLGNGKPGKPQYGRGELAARIAPAFTAILTSPFPASGMPVKFDRTLYNGHNGYNPVTGIFTCPVSGIYYFAYHVHVKGTNVWVALYKNNVPATYTYDEYKKGYLDQASGSAVLELKENDQVWVQMPSDQANGLYSTEYIHSSFSGFLLCPT
SIO_010081: COL8A2
subclass of: SO_0000673
so part of: COL8A2
location: join(1134161..1134335,1138689..1140610)
location: region:1134161-1140610:1
so has part: feature:1134161-1134335:1:exon
so has part: feature:1138689-1140610:1:exon

XP_030146355.3
type: Protein
SIO_000068: ncbiprotein

position:1134161:1
position: 1134161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1140610:1
position: 1140610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1134161-1134335:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1138689-1140610:1:exon

COL8A2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: COL8A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: collagen alpha-2(VIII) chain
translation: MLPDAVALLVTLGTMVMVMGPGSAAGGGVGGYAQVKYMQPMVKGPLGPPFREGKGQYLDMPPLLPMDLKGEPGPPGKPGPRGPPGPPGYPGKPGTGKPGMHGQPGPAGPPGFSGIGKPGIPGLPGKVGMKGMPGAKGEPGMRGEQGPRGLPGPPGLPGPAGLSVNGKPGPQGGPGLPGFRGEPGPKGEPGPRGERGMKGENGVGKPGLPGPRGNGGPPGPAGPPGPAGVGKPGLDGLPGAPGDKGDMGPPGGPGVAGEPGPVGPRGPPGIDGIGVPGVAGVPGIQGPMGPKGEPGIRGLPGMPGPTGYGKPGMPGLKGDRGQPGAQGAVGDKGEPGVDGEPGEPGPAGIIGPPGLPGSMGLPGKHGLPGPKGDVGPSGPPGMPGMRGDQGPNGFAGKPGVPGERGLPGSLGPPGPTGPKGEPGFIGLPGVPGLTGGPGPKGDGGIPGQPGLRGPSGIPGLQGPAGPMGPQGLPGLKGEPGLPGIPGEGKTGEPGMAGPIGPPGMPGTPGLNGPPGPPGPPGPPGAPGVLDETGIAGLHLPDGGVEGAVLGNGKPGKPQYGRGELAARIAPAFTAILTSPFPASGMPVKFDRTLYNGHNGYNPVTGIFTCPVSGIYYFAYHVHVKGTNVWVALYKNNVPATYTYDEYKKGYLDQASGSAVLELKENDQVWVQMPSDQANGLYSTEYIHSSFSGFLLCPT
SIO_010081: COL8A2
subclass of: SO_0000673
so part of: COL8A2
location: join(1134161..1134335,1138689..1140610)
location: region:1134161-1140610:1
so has part: feature:1134161-1134335:1:exon
so has part: feature:1138689-1140610:1:exon

XP_041576719.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1134161-1134335:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1138689-1140610:1:exon

ADPRS
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: ADPRS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1143617..1149746)
location: region:1143617-1149746:-1
so has part: feature:1143617-1149746:-1:exon
subclass of: SO_0000010

100228514
type: Gene
SIO_000068: ncbigene

position:1143617:-1
position: 1143617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1149746:-1
position: 1149746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1143617-1149746:-1:exon

ADPRS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: ADPRS
product: ADP-ribosylserine hydrolase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 7 ESTs, 13 long SRA reads, 7 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 105 samples with support for all annotated introns
transcript id: XM_030290506.3
SIO_010081: ADPRS
subclass of: SO_0000673
so part of: ADPRS
location: complement(join(1143617..1145713,1146208..1146308,1146400..1146584,1146673..1146880,1147664..1147760,1149482..1149746))
location: region:1143617-1149746:-1
so has part: feature:1149482-1149746:-1:exon
so has part: feature:1147664-1147760:-1:exon
so has part: feature:1146673-1146880:-1:exon
so has part: feature:1146400-1146584:-1:exon
so has part: feature:1146208-1146308:-1:exon
so has part: feature:1143617-1145713:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1149482-1149746:-1:exon

position:1149482:-1
position: 1149482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1147664-1147760:-1:exon

position:1147664:-1
position: 1147664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1147760:-1
position: 1147760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1146673-1146880:-1:exon

position:1146673:-1
position: 1146673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1146880:-1
position: 1146880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1146400-1146584:-1:exon

position:1146400:-1
position: 1146400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1146584:-1
position: 1146584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1146208-1146308:-1:exon

position:1146208:-1
position: 1146208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1146308:-1
position: 1146308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1143617-1145713:-1:exon

position:1145713:-1
position: 1145713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ADPRS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: ADPRS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ADP-ribose glycohydrolase ARH3
translation: MEAAGPPSSPGRLPVRPRPGLARFRGCLAGALLGDCLGAVFEGRSVVKLPELLSFLKGLEAAPPEEGGEAAGSARGESLPYTDDTAMSRSVVQSLLAKQEFDEVDMAKRFAEEYKKEPNRGYGMAVVNVFKKLLSPKCNDVFEPARAQFNGKGSYGNGGAMRVAGIPLVYPDIQDVKKFAKLSAELTHANSLGYNGAILQALAVHLALQEGLSRETFLEQLISHMEHVEADDKSLSDARALGFEDLPFSRRLKKIKEFLELSSVPKADVLSELGNGIAALRSVPTAIYSFLRCMDADPDIPDHFNALQRTIIYCISLGGDTDTIATMAGAIAGAYYGEEQVPPSWEQSCEAFQETQRMAKSLYELYCQRL
SIO_010081: ADPRS
subclass of: SO_0000673
so part of: ADPRS
location: complement(join(1145421..1145713,1146208..1146308,1146400..1146584,1146673..1146880,1147664..1147760,1149482..1149710))
location: region:1145421-1149710:-1
so has part: feature:1149482-1149710:-1:exon
so has part: feature:1147664-1147760:-1:exon
so has part: feature:1146673-1146880:-1:exon
so has part: feature:1146400-1146584:-1:exon
so has part: feature:1146208-1146308:-1:exon
so has part: feature:1145421-1145713:-1:exon

XP_030146366.3
type: Protein
SIO_000068: ncbiprotein

position:1145421:-1
position: 1145421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1149710:-1
position: 1149710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1149482-1149710:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1147664-1147760:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1146673-1146880:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1146400-1146584:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1146208-1146308:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1145421-1145713:-1:exon

TEKT2
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: TEKT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1149891..1156135)
location: region:1149891-1156135:-1
so has part: feature:1149891-1156135:-1:exon
subclass of: SO_0000010

100225642
type: Gene
SIO_000068: ncbigene

position:1149891:-1
position: 1149891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1156135:-1
position: 1156135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1149891-1156135:-1:exon

TEKT2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: TEKT2
product: tektin 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030290502.3
SIO_010081: TEKT2
subclass of: SO_0000673
so part of: TEKT2
location: complement(join(1149891..1150286,1150950..1151029,1151231..1151374,1151751..1151858,1152197..1152311,1152810..1152953,1153432..1153637,1154284..1154409,1154792..1154963,1156101..1156135))
location: region:1149891-1156135:-1
so has part: feature:1156101-1156135:-1:exon
so has part: feature:1154792-1154963:-1:exon
so has part: feature:1154284-1154409:-1:exon
so has part: feature:1153432-1153637:-1:exon
so has part: feature:1152810-1152953:-1:exon
so has part: feature:1152197-1152311:-1:exon
so has part: feature:1151751-1151858:-1:exon
so has part: feature:1151231-1151374:-1:exon
so has part: feature:1150950-1151029:-1:exon
so has part: feature:1149891-1150286:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1156101-1156135:-1:exon

position:1156101:-1
position: 1156101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1154792-1154963:-1:exon

position:1154792:-1
position: 1154792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1154963:-1
position: 1154963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1154284-1154409:-1:exon

position:1154284:-1
position: 1154284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1154409:-1
position: 1154409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1153432-1153637:-1:exon

position:1153432:-1
position: 1153432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1153637:-1
position: 1153637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1152810-1152953:-1:exon

position:1152810:-1
position: 1152810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1152953:-1
position: 1152953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1152197-1152311:-1:exon

position:1152197:-1
position: 1152197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1152311:-1
position: 1152311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1151751-1151858:-1:exon

position:1151751:-1
position: 1151751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1151858:-1
position: 1151858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1151231-1151374:-1:exon

position:1151231:-1
position: 1151231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1151374:-1
position: 1151374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1150950-1151029:-1:exon

position:1150950:-1
position: 1150950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1151029:-1
position: 1151029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1149891-1150286:-1:exon

position:1150286:-1
position: 1150286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TEKT2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: TEKT2
product: tektin 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_041720787.1
SIO_010081: TEKT2
subclass of: SO_0000673
so part of: TEKT2
location: complement(join(1149891..1150286,1150950..1151029,1151231..1151374,1151751..1151858,1152197..1152311,1152810..1152953,1153432..1153637,1154284..1154409,1154792..1154963,1156080..1156130))
location: region:1149891-1156130:-1
so has part: feature:1156080-1156130:-1:exon
so has part: feature:1154792-1154963:-1:exon
so has part: feature:1154284-1154409:-1:exon
so has part: feature:1153432-1153637:-1:exon
so has part: feature:1152810-1152953:-1:exon
so has part: feature:1152197-1152311:-1:exon
so has part: feature:1151751-1151858:-1:exon
so has part: feature:1151231-1151374:-1:exon
so has part: feature:1150950-1151029:-1:exon
so has part: feature:1149891-1150286:-1:exon

position:1156130:-1
position: 1156130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1156080-1156130:-1:exon

position:1156080:-1
position: 1156080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1154792-1154963:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1154284-1154409:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1153432-1153637:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1152810-1152953:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1152197-1152311:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1151751-1151858:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1151231-1151374:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1150950-1151029:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1149891-1150286:-1:exon

TEKT2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: TEKT2
product: tektin 2, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041720789.1
SIO_010081: TEKT2
subclass of: SO_0000673
so part of: TEKT2
location: complement(join(1149891..1150286,1150950..1151029,1151231..1151374,1151751..1151858,1152197..1152311,1152810..1152953,1153432..1153637,1154284..1154409,1154792..1154963,1156059..1156075))
location: region:1149891-1156075:-1
so has part: feature:1156059-1156075:-1:exon
so has part: feature:1154792-1154963:-1:exon
so has part: feature:1154284-1154409:-1:exon
so has part: feature:1153432-1153637:-1:exon
so has part: feature:1152810-1152953:-1:exon
so has part: feature:1152197-1152311:-1:exon
so has part: feature:1151751-1151858:-1:exon
so has part: feature:1151231-1151374:-1:exon
so has part: feature:1150950-1151029:-1:exon
so has part: feature:1149891-1150286:-1:exon

position:1156075:-1
position: 1156075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1156059-1156075:-1:exon

position:1156059:-1
position: 1156059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1154792-1154963:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1154284-1154409:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1153432-1153637:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1152810-1152953:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1152197-1152311:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1151751-1151858:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1151231-1151374:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1150950-1151029:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1149891-1150286:-1:exon

TEKT2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: TEKT2
product: tektin 2, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030290501.3
SIO_010081: TEKT2
subclass of: SO_0000673
so part of: TEKT2
location: complement(join(1149891..1150286,1150950..1151029,1151231..1151374,1151751..1151858,1152197..1152311,1152810..1152953,1153432..1153637,1154284..1154409,1154792..1154963,1156008..1156034))
location: region:1149891-1156034:-1
so has part: feature:1156008-1156034:-1:exon
so has part: feature:1154792-1154963:-1:exon
so has part: feature:1154284-1154409:-1:exon
so has part: feature:1153432-1153637:-1:exon
so has part: feature:1152810-1152953:-1:exon
so has part: feature:1152197-1152311:-1:exon
so has part: feature:1151751-1151858:-1:exon
so has part: feature:1151231-1151374:-1:exon
so has part: feature:1150950-1151029:-1:exon
so has part: feature:1149891-1150286:-1:exon

position:1156034:-1
position: 1156034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1156008-1156034:-1:exon

position:1156008:-1
position: 1156008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1154792-1154963:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1154284-1154409:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1153432-1153637:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1152810-1152953:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1152197-1152311:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1151751-1151858:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1151231-1151374:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1150950-1151029:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1149891-1150286:-1:exon

TEKT2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: TEKT2
product: tektin 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041720788.1
SIO_010081: TEKT2
subclass of: SO_0000673
so part of: TEKT2
location: complement(join(1149891..1150286,1150950..1151029,1151231..1151374,1151751..1151858,1152197..1152311,1152810..1152953,1153432..1153637,1154284..1154409,1154792..1154963,1155987..1156024))
location: region:1149891-1156024:-1
so has part: feature:1155987-1156024:-1:exon
so has part: feature:1154792-1154963:-1:exon
so has part: feature:1154284-1154409:-1:exon
so has part: feature:1153432-1153637:-1:exon
so has part: feature:1152810-1152953:-1:exon
so has part: feature:1152197-1152311:-1:exon
so has part: feature:1151751-1151858:-1:exon
so has part: feature:1151231-1151374:-1:exon
so has part: feature:1150950-1151029:-1:exon
so has part: feature:1149891-1150286:-1:exon

position:1156024:-1
position: 1156024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1155987-1156024:-1:exon

position:1155987:-1
position: 1155987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1154792-1154963:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1154284-1154409:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1153432-1153637:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1152810-1152953:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1152197-1152311:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1151751-1151858:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1151231-1151374:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1150950-1151029:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1149891-1150286:-1:exon

TEKT2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: TEKT2
product: tektin 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_041720786.1
SIO_010081: TEKT2
subclass of: SO_0000673
so part of: TEKT2
location: complement(join(1149891..1150286,1150950..1151029,1151231..1151374,1151751..1151858,1152197..1152311,1152810..1152953,1153432..1153637,1154284..1154409,1154792..1154963,1155936..1155991))
location: region:1149891-1155991:-1
so has part: feature:1155936-1155991:-1:exon
so has part: feature:1154792-1154963:-1:exon
so has part: feature:1154284-1154409:-1:exon
so has part: feature:1153432-1153637:-1:exon
so has part: feature:1152810-1152953:-1:exon
so has part: feature:1152197-1152311:-1:exon
so has part: feature:1151751-1151858:-1:exon
so has part: feature:1151231-1151374:-1:exon
so has part: feature:1150950-1151029:-1:exon
so has part: feature:1149891-1150286:-1:exon

position:1155991:-1
position: 1155991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1155936-1155991:-1:exon

position:1155936:-1
position: 1155936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1154792-1154963:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1154284-1154409:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1153432-1153637:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1152810-1152953:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1152197-1152311:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1151751-1151858:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1151231-1151374:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1150950-1151029:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1149891-1150286:-1:exon

TEKT2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: TEKT2
product: tektin 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030290497.3
SIO_010081: TEKT2
subclass of: SO_0000673
so part of: TEKT2
location: complement(join(1149891..1150286,1150950..1151029,1151231..1151374,1151751..1151858,1152197..1152311,1152810..1152953,1153432..1153637,1154284..1154409,1154792..1154963,1155674..1155695))
location: region:1149891-1155695:-1
so has part: feature:1155674-1155695:-1:exon
so has part: feature:1154792-1154963:-1:exon
so has part: feature:1154284-1154409:-1:exon
so has part: feature:1153432-1153637:-1:exon
so has part: feature:1152810-1152953:-1:exon
so has part: feature:1152197-1152311:-1:exon
so has part: feature:1151751-1151858:-1:exon
so has part: feature:1151231-1151374:-1:exon
so has part: feature:1150950-1151029:-1:exon
so has part: feature:1149891-1150286:-1:exon

position:1155695:-1
position: 1155695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1155674-1155695:-1:exon

position:1155674:-1
position: 1155674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1154792-1154963:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1154284-1154409:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1153432-1153637:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1152810-1152953:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1152197-1152311:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1151751-1151858:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1151231-1151374:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1150950-1151029:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1149891-1150286:-1:exon

TEKT2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: TEKT2
product: tektin 2, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030290504.3
SIO_010081: TEKT2
subclass of: SO_0000673
so part of: TEKT2
location: complement(join(1149891..1150286,1150950..1151029,1151231..1151374,1151751..1151858,1152197..1152311,1152810..1152953,1153432..1153637,1154284..1154409,1154792..1154963,1155525..1155592))
location: region:1149891-1155592:-1
so has part: feature:1155525-1155592:-1:exon
so has part: feature:1154792-1154963:-1:exon
so has part: feature:1154284-1154409:-1:exon
so has part: feature:1153432-1153637:-1:exon
so has part: feature:1152810-1152953:-1:exon
so has part: feature:1152197-1152311:-1:exon
so has part: feature:1151751-1151858:-1:exon
so has part: feature:1151231-1151374:-1:exon
so has part: feature:1150950-1151029:-1:exon
so has part: feature:1149891-1150286:-1:exon

position:1155592:-1
position: 1155592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1155525-1155592:-1:exon

position:1155525:-1
position: 1155525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1154792-1154963:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1154284-1154409:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1153432-1153637:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1152810-1152953:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1152197-1152311:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1151751-1151858:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1151231-1151374:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1150950-1151029:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1149891-1150286:-1:exon

TEKT2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: TEKT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tektin-2
translation: MASLSVKPGQRFTLPDWQNNSLLISANAEQQRYNSHHVRQEGRALRNETGNQAKWDEHNSRTQLKDRITSVDRWREALAKCLADIDLEIDALTKVKEAAENALQAKNLCLDVAIECLTFRESRRDIDVVRDPVEEELLKEVKVIEKTKKELQKRVDDAFKQLCLLKEARQQLSLDHRHKVETLELDRQCMSFNPTSGNISFKVNPTRIPDGSTALREWELNSQCNKDRAEAAMKASVDLRGAITLSIAQTNNELDAQRIATEFALRKRMRDMEAALSELRWQEQNTLEEIDEMEEEIRRLEEDIRKRTLDLKVAHTRLETRTYRPHLDLCRDQAQYGLTDEVQQLEGIIRALQQKRTESQDALDALYRQLHRIQTDIGYKTNSLQLDNKCMDTRRKLVIPVEKFDPEVDAVNRTRNLPRNNQLELA
SIO_010081: TEKT2
subclass of: SO_0000673
so part of: TEKT2
location: complement(join(1150085..1150286,1150950..1151029,1151231..1151374,1151751..1151858,1152197..1152311,1152810..1152953,1153432..1153637,1154284..1154409,1154792..1154947))
location: region:1150085-1154947:-1
so has part: feature:1154792-1154947:-1:exon
so has part: feature:1154284-1154409:-1:exon
so has part: feature:1153432-1153637:-1:exon
so has part: feature:1152810-1152953:-1:exon
so has part: feature:1152197-1152311:-1:exon
so has part: feature:1151751-1151858:-1:exon
so has part: feature:1151231-1151374:-1:exon
so has part: feature:1150950-1151029:-1:exon
so has part: feature:1150085-1150286:-1:exon

XP_030146357.3
type: Protein
SIO_000068: ncbiprotein

position:1150085:-1
position: 1150085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1154947:-1
position: 1154947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1154792-1154947:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1154284-1154409:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1153432-1153637:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1152810-1152953:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1152197-1152311:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1151751-1151858:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1151231-1151374:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1150950-1151029:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1150085-1150286:-1:exon

TEKT2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: TEKT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tektin-2
translation: MASLSVKPGQRFTLPDWQNNSLLISANAEQQRYNSHHVRQEGRALRNETGNQAKWDEHNSRTQLKDRITSVDRWREALAKCLADIDLEIDALTKVKEAAENALQAKNLCLDVAIECLTFRESRRDIDVVRDPVEEELLKEVKVIEKTKKELQKRVDDAFKQLCLLKEARQQLSLDHRHKVETLELDRQCMSFNPTSGNISFKVNPTRIPDGSTALREWELNSQCNKDRAEAAMKASVDLRGAITLSIAQTNNELDAQRIATEFALRKRMRDMEAALSELRWQEQNTLEEIDEMEEEIRRLEEDIRKRTLDLKVAHTRLETRTYRPHLDLCRDQAQYGLTDEVQQLEGIIRALQQKRTESQDALDALYRQLHRIQTDIGYKTNSLQLDNKCMDTRRKLVIPVEKFDPEVDAVNRTRNLPRNNQLELA
SIO_010081: TEKT2
subclass of: SO_0000673
so part of: TEKT2
location: complement(join(1150085..1150286,1150950..1151029,1151231..1151374,1151751..1151858,1152197..1152311,1152810..1152953,1153432..1153637,1154284..1154409,1154792..1154947))
location: region:1150085-1154947:-1
so has part: feature:1154792-1154947:-1:exon
so has part: feature:1154284-1154409:-1:exon
so has part: feature:1153432-1153637:-1:exon
so has part: feature:1152810-1152953:-1:exon
so has part: feature:1152197-1152311:-1:exon
so has part: feature:1151751-1151858:-1:exon
so has part: feature:1151231-1151374:-1:exon
so has part: feature:1150950-1151029:-1:exon
so has part: feature:1150085-1150286:-1:exon

XP_041576720.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1154792-1154947:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1154284-1154409:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1153432-1153637:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1152810-1152953:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1152197-1152311:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1151751-1151858:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1151231-1151374:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1150950-1151029:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1150085-1150286:-1:exon

TEKT2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: TEKT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tektin-2
translation: MASLSVKPGQRFTLPDWQNNSLLISANAEQQRYNSHHVRQEGRALRNETGNQAKWDEHNSRTQLKDRITSVDRWREALAKCLADIDLEIDALTKVKEAAENALQAKNLCLDVAIECLTFRESRRDIDVVRDPVEEELLKEVKVIEKTKKELQKRVDDAFKQLCLLKEARQQLSLDHRHKVETLELDRQCMSFNPTSGNISFKVNPTRIPDGSTALREWELNSQCNKDRAEAAMKASVDLRGAITLSIAQTNNELDAQRIATEFALRKRMRDMEAALSELRWQEQNTLEEIDEMEEEIRRLEEDIRKRTLDLKVAHTRLETRTYRPHLDLCRDQAQYGLTDEVQQLEGIIRALQQKRTESQDALDALYRQLHRIQTDIGYKTNSLQLDNKCMDTRRKLVIPVEKFDPEVDAVNRTRNLPRNNQLELA
SIO_010081: TEKT2
subclass of: SO_0000673
so part of: TEKT2
location: complement(join(1150085..1150286,1150950..1151029,1151231..1151374,1151751..1151858,1152197..1152311,1152810..1152953,1153432..1153637,1154284..1154409,1154792..1154947))
location: region:1150085-1154947:-1
so has part: feature:1154792-1154947:-1:exon
so has part: feature:1154284-1154409:-1:exon
so has part: feature:1153432-1153637:-1:exon
so has part: feature:1152810-1152953:-1:exon
so has part: feature:1152197-1152311:-1:exon
so has part: feature:1151751-1151858:-1:exon
so has part: feature:1151231-1151374:-1:exon
so has part: feature:1150950-1151029:-1:exon
so has part: feature:1150085-1150286:-1:exon

XP_041576721.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1154792-1154947:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1154284-1154409:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1153432-1153637:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1152810-1152953:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1152197-1152311:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1151751-1151858:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1151231-1151374:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1150950-1151029:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1150085-1150286:-1:exon

TEKT2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: TEKT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tektin-2
translation: MASLSVKPGQRFTLPDWQNNSLLISANAEQQRYNSHHVRQEGRALRNETGNQAKWDEHNSRTQLKDRITSVDRWREALAKCLADIDLEIDALTKVKEAAENALQAKNLCLDVAIECLTFRESRRDIDVVRDPVEEELLKEVKVIEKTKKELQKRVDDAFKQLCLLKEARQQLSLDHRHKVETLELDRQCMSFNPTSGNISFKVNPTRIPDGSTALREWELNSQCNKDRAEAAMKASVDLRGAITLSIAQTNNELDAQRIATEFALRKRMRDMEAALSELRWQEQNTLEEIDEMEEEIRRLEEDIRKRTLDLKVAHTRLETRTYRPHLDLCRDQAQYGLTDEVQQLEGIIRALQQKRTESQDALDALYRQLHRIQTDIGYKTNSLQLDNKCMDTRRKLVIPVEKFDPEVDAVNRTRNLPRNNQLELA
SIO_010081: TEKT2
subclass of: SO_0000673
so part of: TEKT2
location: complement(join(1150085..1150286,1150950..1151029,1151231..1151374,1151751..1151858,1152197..1152311,1152810..1152953,1153432..1153637,1154284..1154409,1154792..1154947))
location: region:1150085-1154947:-1
so has part: feature:1154792-1154947:-1:exon
so has part: feature:1154284-1154409:-1:exon
so has part: feature:1153432-1153637:-1:exon
so has part: feature:1152810-1152953:-1:exon
so has part: feature:1152197-1152311:-1:exon
so has part: feature:1151751-1151858:-1:exon
so has part: feature:1151231-1151374:-1:exon
so has part: feature:1150950-1151029:-1:exon
so has part: feature:1150085-1150286:-1:exon

XP_041576722.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1154792-1154947:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1154284-1154409:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1153432-1153637:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1152810-1152953:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1152197-1152311:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1151751-1151858:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1151231-1151374:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1150950-1151029:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1150085-1150286:-1:exon

TEKT2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: TEKT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tektin-2
translation: MASLSVKPGQRFTLPDWQNNSLLISANAEQQRYNSHHVRQEGRALRNETGNQAKWDEHNSRTQLKDRITSVDRWREALAKCLADIDLEIDALTKVKEAAENALQAKNLCLDVAIECLTFRESRRDIDVVRDPVEEELLKEVKVIEKTKKELQKRVDDAFKQLCLLKEARQQLSLDHRHKVETLELDRQCMSFNPTSGNISFKVNPTRIPDGSTALREWELNSQCNKDRAEAAMKASVDLRGAITLSIAQTNNELDAQRIATEFALRKRMRDMEAALSELRWQEQNTLEEIDEMEEEIRRLEEDIRKRTLDLKVAHTRLETRTYRPHLDLCRDQAQYGLTDEVQQLEGIIRALQQKRTESQDALDALYRQLHRIQTDIGYKTNSLQLDNKCMDTRRKLVIPVEKFDPEVDAVNRTRNLPRNNQLELA
SIO_010081: TEKT2
subclass of: SO_0000673
so part of: TEKT2
location: complement(join(1150085..1150286,1150950..1151029,1151231..1151374,1151751..1151858,1152197..1152311,1152810..1152953,1153432..1153637,1154284..1154409,1154792..1154947))
location: region:1150085-1154947:-1
so has part: feature:1154792-1154947:-1:exon
so has part: feature:1154284-1154409:-1:exon
so has part: feature:1153432-1153637:-1:exon
so has part: feature:1152810-1152953:-1:exon
so has part: feature:1152197-1152311:-1:exon
so has part: feature:1151751-1151858:-1:exon
so has part: feature:1151231-1151374:-1:exon
so has part: feature:1150950-1151029:-1:exon
so has part: feature:1150085-1150286:-1:exon

XP_030146362.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1154792-1154947:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1154284-1154409:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1153432-1153637:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1152810-1152953:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1152197-1152311:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1151751-1151858:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1151231-1151374:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1150950-1151029:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1150085-1150286:-1:exon

TEKT2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: TEKT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tektin-2
translation: MASLSVKPGQRFTLPDWQNNSLLISANAEQQRYNSHHVRQEGRALRNETGNQAKWDEHNSRTQLKDRITSVDRWREALAKCLADIDLEIDALTKVKEAAENALQAKNLCLDVAIECLTFRESRRDIDVVRDPVEEELLKEVKVIEKTKKELQKRVDDAFKQLCLLKEARQQLSLDHRHKVETLELDRQCMSFNPTSGNISFKVNPTRIPDGSTALREWELNSQCNKDRAEAAMKASVDLRGAITLSIAQTNNELDAQRIATEFALRKRMRDMEAALSELRWQEQNTLEEIDEMEEEIRRLEEDIRKRTLDLKVAHTRLETRTYRPHLDLCRDQAQYGLTDEVQQLEGIIRALQQKRTESQDALDALYRQLHRIQTDIGYKTNSLQLDNKCMDTRRKLVIPVEKFDPEVDAVNRTRNLPRNNQLELA
SIO_010081: TEKT2
subclass of: SO_0000673
so part of: TEKT2
location: complement(join(1150085..1150286,1150950..1151029,1151231..1151374,1151751..1151858,1152197..1152311,1152810..1152953,1153432..1153637,1154284..1154409,1154792..1154947))
location: region:1150085-1154947:-1
so has part: feature:1154792-1154947:-1:exon
so has part: feature:1154284-1154409:-1:exon
so has part: feature:1153432-1153637:-1:exon
so has part: feature:1152810-1152953:-1:exon
so has part: feature:1152197-1152311:-1:exon
so has part: feature:1151751-1151858:-1:exon
so has part: feature:1151231-1151374:-1:exon
so has part: feature:1150950-1151029:-1:exon
so has part: feature:1150085-1150286:-1:exon

XP_030146364.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1154792-1154947:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1154284-1154409:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1153432-1153637:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1152810-1152953:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1152197-1152311:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1151751-1151858:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1151231-1151374:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1150950-1151029:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1150085-1150286:-1:exon

TEKT2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: TEKT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tektin-2
translation: MASLSVKPGQRFTLPDWQNNSLLISANAEQQRYNSHHVRQEGRALRNETGNQAKWDEHNSRTQLKDRITSVDRWREALAKCLADIDLEIDALTKVKEAAENALQAKNLCLDVAIECLTFRESRRDIDVVRDPVEEELLKEVKVIEKTKKELQKRVDDAFKQLCLLKEARQQLSLDHRHKVETLELDRQCMSFNPTSGNISFKVNPTRIPDGSTALREWELNSQCNKDRAEAAMKASVDLRGAITLSIAQTNNELDAQRIATEFALRKRMRDMEAALSELRWQEQNTLEEIDEMEEEIRRLEEDIRKRTLDLKVAHTRLETRTYRPHLDLCRDQAQYGLTDEVQQLEGIIRALQQKRTESQDALDALYRQLHRIQTDIGYKTNSLQLDNKCMDTRRKLVIPVEKFDPEVDAVNRTRNLPRNNQLELA
SIO_010081: TEKT2
subclass of: SO_0000673
so part of: TEKT2
location: complement(join(1150085..1150286,1150950..1151029,1151231..1151374,1151751..1151858,1152197..1152311,1152810..1152953,1153432..1153637,1154284..1154409,1154792..1154947))
location: region:1150085-1154947:-1
so has part: feature:1154792-1154947:-1:exon
so has part: feature:1154284-1154409:-1:exon
so has part: feature:1153432-1153637:-1:exon
so has part: feature:1152810-1152953:-1:exon
so has part: feature:1152197-1152311:-1:exon
so has part: feature:1151751-1151858:-1:exon
so has part: feature:1151231-1151374:-1:exon
so has part: feature:1150950-1151029:-1:exon
so has part: feature:1150085-1150286:-1:exon

XP_030146361.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1154792-1154947:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1154284-1154409:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1153432-1153637:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1152810-1152953:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1152197-1152311:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1151751-1151858:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1151231-1151374:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1150950-1151029:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1150085-1150286:-1:exon

TEKT2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: TEKT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tektin-2
translation: MASLSVKPGQRFTLPDWQNNSLLISANAEQQRYNSHHVRQEGRALRNETGNQAKWDEHNSRTQLKDRITSVDRWREALAKCLADIDLEIDALTKVKEAAENALQAKNLCLDVAIECLTFRESRRDIDVVRDPVEEELLKEVKVIEKTKKELQKRVDDAFKQLCLLKEARQQLSLDHRHKVETLELDRQCMSFNPTSGNISFKVNPTRIPDGSTALREWELNSQCNKDRAEAAMKASVDLRGAITLSIAQTNNELDAQRIATEFALRKRMRDMEAALSELRWQEQNTLEEIDEMEEEIRRLEEDIRKRTLDLKVAHTRLETRTYRPHLDLCRDQAQYGLTDEVQQLEGIIRALQQKRTESQDALDALYRQLHRIQTDIGYKTNSLQLDNKCMDTRRKLVIPVEKFDPEVDAVNRTRNLPRNNQLELA
SIO_010081: TEKT2
subclass of: SO_0000673
so part of: TEKT2
location: complement(join(1150085..1150286,1150950..1151029,1151231..1151374,1151751..1151858,1152197..1152311,1152810..1152953,1153432..1153637,1154284..1154409,1154792..1154947))
location: region:1150085-1154947:-1
so has part: feature:1154792-1154947:-1:exon
so has part: feature:1154284-1154409:-1:exon
so has part: feature:1153432-1153637:-1:exon
so has part: feature:1152810-1152953:-1:exon
so has part: feature:1152197-1152311:-1:exon
so has part: feature:1151751-1151858:-1:exon
so has part: feature:1151231-1151374:-1:exon
so has part: feature:1150950-1151029:-1:exon
so has part: feature:1150085-1150286:-1:exon

XP_041576723.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1154792-1154947:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1154284-1154409:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1153432-1153637:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1152810-1152953:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1152197-1152311:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1151751-1151858:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1151231-1151374:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1150950-1151029:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1150085-1150286:-1:exon

AGO3
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: AGO3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1156535..1190886)
location: region:1156535-1190886:-1
so has part: feature:1156535-1190886:-1:exon
subclass of: SO_0000010

100222761
type: Gene
SIO_000068: ncbigene

position:1156535:-1
position: 1156535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1190886:-1
position: 1190886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1156535-1190886:-1:exon

AGO3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: AGO3
product: argonaute RISC catalytic component 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 34 ESTs, 3 long SRA reads, 54 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_030290493.3
SIO_010081: AGO3
subclass of: SO_0000673
so part of: AGO3
location: complement(join(1156535..1167706,1169306..1169505,1170566..1170667,1171222..1171356,1171794..1171988,1173270..1173360,1174007..1174166,1174455..1174639,1175067..1175200,1175376..1175498,1175964..1176083,1176360..1176507,1176638..1176725,1178867..1179001,1181099..1181235,1182435..1182643,1183177..1183297,1184354..1184525,1190602..1190886))
location: region:1156535-1190886:-1
so has part: feature:1190602-1190886:-1:exon
so has part: feature:1184354-1184525:-1:exon
so has part: feature:1183177-1183297:-1:exon
so has part: feature:1182435-1182643:-1:exon
so has part: feature:1181099-1181235:-1:exon
so has part: feature:1178867-1179001:-1:exon
so has part: feature:1176638-1176725:-1:exon
so has part: feature:1176360-1176507:-1:exon
so has part: feature:1175964-1176083:-1:exon
so has part: feature:1175376-1175498:-1:exon
so has part: feature:1175067-1175200:-1:exon
so has part: feature:1174455-1174639:-1:exon
so has part: feature:1174007-1174166:-1:exon
so has part: feature:1173270-1173360:-1:exon
so has part: feature:1171794-1171988:-1:exon
so has part: feature:1171222-1171356:-1:exon
so has part: feature:1170566-1170667:-1:exon
so has part: feature:1169306-1169505:-1:exon
so has part: feature:1156535-1167706:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1190602-1190886:-1:exon

position:1190602:-1
position: 1190602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1184354-1184525:-1:exon

position:1184354:-1
position: 1184354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1184525:-1
position: 1184525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1183177-1183297:-1:exon

position:1183177:-1
position: 1183177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1183297:-1
position: 1183297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1182435-1182643:-1:exon

position:1182435:-1
position: 1182435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1182643:-1
position: 1182643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1181099-1181235:-1:exon

position:1181099:-1
position: 1181099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1181235:-1
position: 1181235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1178867-1179001:-1:exon

position:1178867:-1
position: 1178867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1179001:-1
position: 1179001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1176638-1176725:-1:exon

position:1176638:-1
position: 1176638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1176725:-1
position: 1176725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1176360-1176507:-1:exon

position:1176360:-1
position: 1176360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1176507:-1
position: 1176507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1175964-1176083:-1:exon

position:1175964:-1
position: 1175964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1176083:-1
position: 1176083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1175376-1175498:-1:exon

position:1175376:-1
position: 1175376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1175498:-1
position: 1175498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1175067-1175200:-1:exon

position:1175067:-1
position: 1175067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1175200:-1
position: 1175200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1174455-1174639:-1:exon

position:1174455:-1
position: 1174455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1174639:-1
position: 1174639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1174007-1174166:-1:exon

position:1174007:-1
position: 1174007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1174166:-1
position: 1174166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1173270-1173360:-1:exon

position:1173270:-1
position: 1173270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1173360:-1
position: 1173360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1171794-1171988:-1:exon

position:1171794:-1
position: 1171794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1171988:-1
position: 1171988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1171222-1171356:-1:exon

position:1171222:-1
position: 1171222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1171356:-1
position: 1171356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1170566-1170667:-1:exon

position:1170566:-1
position: 1170566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1170667:-1
position: 1170667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1169306-1169505:-1:exon

position:1169306:-1
position: 1169306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1169505:-1
position: 1169505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1156535-1167706:-1:exon

position:1167706:-1
position: 1167706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

AGO3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: AGO3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein argonaute-3
translation: MEIGSAGPVGAQPLLMVPRRPGYGTMGKPIKLLANCFQVEIPKIDVYLYEVDIKPDKCPRRVNRDVVDSMVQHFKVTIFGDRRPVYDGKRSLYTANPLPVATTGVDLDVTLPGEGGKDRPFKVSIKFVSRVSWHLLHEVLTGRTLPEPLELDKPISTNPVHAVDVVLRHLPSMKYTPVGRSFFSAPEGYDHPLGGGREVWFGFHQSVRPAMWKMMLNIDVSATAFYKAQPVIQFMCEVLDIHNIDEQPRPLTDSHRVKFTKEIKGLKVEVTHCGTMRRKYRVCNVTRRPASHQTFPLQLENGQTVERTVAQYFREKYNLQLKYPHLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDNQTSTMIKATARSAPDRQEEISRLVRSANYDADPFVQEFQFKVRDEMAHVTGRVLPAPMLQYGGRNRTVATPSHGVWDMRGKQFHTGVEIKMWAIACFATQRQCREEILKGFTDQLRKISKDAGMPIQGQPCFCKYAQGADSVEPMFRHLKNTYSGLQLIIVILPGKTPVYAEVKRVGDTLLGMATQCVQVKNVIKTSPQTLSNLCLKINVKLGGINNILVPHQRPSVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMDAHPSRYCATVRVQRPRQEIIQDLASMVRELLIQFYKSTRFKPTRIIFYRDGVSEGQFRQVLYYELLAIREACISLEKDYQPGITYIVVQKRHHTRLFCADRTERVGRSGNIPAGTTVDTDITHPYEFDFYLCSHAGIQGTSRPSHYHVLWDDNCFTADELQLLTYQLCHTYVRCTRSVSIPAPAYYAHLVAFRARYHLVDKEHDSAEGSHVSGQSNGRDPQALAKAVQIHQDTLRTMYFA
SIO_010081: AGO3
subclass of: SO_0000673
so part of: AGO3
location: complement(join(1167598..1167706,1169306..1169505,1170566..1170667,1171222..1171356,1171794..1171988,1173270..1173360,1174007..1174166,1174455..1174639,1175067..1175200,1175376..1175498,1175964..1176083,1176360..1176507,1176638..1176725,1178867..1179001,1181099..1181235,1182435..1182643,1183177..1183297,1184354..1184525,1190602..1190620))
location: region:1167598-1190620:-1
so has part: feature:1190602-1190620:-1:exon
so has part: feature:1184354-1184525:-1:exon
so has part: feature:1183177-1183297:-1:exon
so has part: feature:1182435-1182643:-1:exon
so has part: feature:1181099-1181235:-1:exon
so has part: feature:1178867-1179001:-1:exon
so has part: feature:1176638-1176725:-1:exon
so has part: feature:1176360-1176507:-1:exon
so has part: feature:1175964-1176083:-1:exon
so has part: feature:1175376-1175498:-1:exon
so has part: feature:1175067-1175200:-1:exon
so has part: feature:1174455-1174639:-1:exon
so has part: feature:1174007-1174166:-1:exon
so has part: feature:1173270-1173360:-1:exon
so has part: feature:1171794-1171988:-1:exon
so has part: feature:1171222-1171356:-1:exon
so has part: feature:1170566-1170667:-1:exon
so has part: feature:1169306-1169505:-1:exon
so has part: feature:1167598-1167706:-1:exon

XP_030146353.1
type: Protein
SIO_000068: ncbiprotein

position:1167598:-1
position: 1167598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1190620:-1
position: 1190620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1190602-1190620:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1184354-1184525:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1183177-1183297:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1182435-1182643:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1181099-1181235:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1178867-1179001:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1176638-1176725:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1176360-1176507:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1175964-1176083:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1175376-1175498:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1175067-1175200:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1174455-1174639:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1174007-1174166:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1173270-1173360:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1171794-1171988:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1171222-1171356:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1170566-1170667:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1169306-1169505:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1167598-1167706:-1:exon

LOC100232386
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC100232386
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1193242..1216127)
location: region:1193242-1216127:-1
so has part: feature:1193242-1216127:-1:exon
subclass of: SO_0000010

100232386
type: Gene
SIO_000068: ncbigene

position:1193242:-1
position: 1193242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1216127:-1
position: 1216127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1193242-1216127:-1:exon

LOC100232386
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 59729
gene: LOC100232386
product: argonaute RISC component 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, 46 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 54 samples with support for all annotated introns
transcript id: XR_003963692.3
SIO_010081: LOC100232386
so part of: LOC100232386
location: complement(join(1193242..1195695,1196947..1197443,1197862..1198061,1198853..1198954,1199824..1199958,1200085..1200279,1201944..1202034,1202326..1202485,1202608..1202792,1203992..1204125,1204527..1204649,1205444..1205563,1205666..1205813,1206843..1206930,1207199..1207333,1207434..1207570,1207820..1208001,1208132..1208252,1208989..1209172,1215995..1216127))
location: region:1193242-1216127:-1
so has part: feature:1215995-1216127:-1:exon
so has part: feature:1208989-1209172:-1:exon
so has part: feature:1208132-1208252:-1:exon
so has part: feature:1207820-1208001:-1:exon
so has part: feature:1207434-1207570:-1:exon
so has part: feature:1207199-1207333:-1:exon
so has part: feature:1206843-1206930:-1:exon
so has part: feature:1205666-1205813:-1:exon
so has part: feature:1205444-1205563:-1:exon
so has part: feature:1204527-1204649:-1:exon
so has part: feature:1203992-1204125:-1:exon
so has part: feature:1202608-1202792:-1:exon
so has part: feature:1202326-1202485:-1:exon
so has part: feature:1201944-1202034:-1:exon
so has part: feature:1200085-1200279:-1:exon
so has part: feature:1199824-1199958:-1:exon
so has part: feature:1198853-1198954:-1:exon
so has part: feature:1197862-1198061:-1:exon
so has part: feature:1196947-1197443:-1:exon
so has part: feature:1193242-1195695:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1215995-1216127:-1:exon

position:1215995:-1
position: 1215995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1208989-1209172:-1:exon

position:1208989:-1
position: 1208989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1209172:-1
position: 1209172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1208132-1208252:-1:exon

position:1208132:-1
position: 1208132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1208252:-1
position: 1208252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1207820-1208001:-1:exon

position:1207820:-1
position: 1207820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1208001:-1
position: 1208001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1207434-1207570:-1:exon

position:1207434:-1
position: 1207434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1207570:-1
position: 1207570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1207199-1207333:-1:exon

position:1207199:-1
position: 1207199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1207333:-1
position: 1207333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1206843-1206930:-1:exon

position:1206843:-1
position: 1206843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1206930:-1
position: 1206930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1205666-1205813:-1:exon

position:1205666:-1
position: 1205666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1205813:-1
position: 1205813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1205444-1205563:-1:exon

position:1205444:-1
position: 1205444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1205563:-1
position: 1205563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1204527-1204649:-1:exon

position:1204527:-1
position: 1204527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1204649:-1
position: 1204649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1203992-1204125:-1:exon

position:1203992:-1
position: 1203992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1204125:-1
position: 1204125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1202608-1202792:-1:exon

position:1202608:-1
position: 1202608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1202792:-1
position: 1202792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1202326-1202485:-1:exon

position:1202326:-1
position: 1202326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1202485:-1
position: 1202485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1201944-1202034:-1:exon

position:1201944:-1
position: 1201944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1202034:-1
position: 1202034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1200085-1200279:-1:exon

position:1200085:-1
position: 1200085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1200279:-1
position: 1200279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1199824-1199958:-1:exon

position:1199824:-1
position: 1199824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1199958:-1
position: 1199958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1198853-1198954:-1:exon

position:1198853:-1
position: 1198853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1198954:-1
position: 1198954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1197862-1198061:-1:exon

position:1197862:-1
position: 1197862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1198061:-1
position: 1198061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1196947-1197443:-1:exon

position:1196947:-1
position: 1196947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1197443:-1
position: 1197443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1193242-1195695:-1:exon

position:1195695:-1
position: 1195695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100232386
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 59729
gene: LOC100232386
product: argonaute RISC component 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 ESTs, 46 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 45 samples with support for all annotated introns
transcript id: XR_003963691.3
SIO_010081: LOC100232386
so part of: LOC100232386
location: complement(join(1193242..1195821,1196947..1197443,1197862..1198061,1198853..1198954,1199824..1199958,1200085..1200279,1201944..1202034,1202326..1202485,1202608..1202792,1203992..1204125,1204527..1204649,1205444..1205563,1205666..1205813,1206843..1206930,1207199..1207333,1207434..1207570,1207820..1208001,1208132..1208252,1208989..1209172,1215995..1216127))
location: region:1193242-1216127:-1
so has part: feature:1215995-1216127:-1:exon
so has part: feature:1208989-1209172:-1:exon
so has part: feature:1208132-1208252:-1:exon
so has part: feature:1207820-1208001:-1:exon
so has part: feature:1207434-1207570:-1:exon
so has part: feature:1207199-1207333:-1:exon
so has part: feature:1206843-1206930:-1:exon
so has part: feature:1205666-1205813:-1:exon
so has part: feature:1205444-1205563:-1:exon
so has part: feature:1204527-1204649:-1:exon
so has part: feature:1203992-1204125:-1:exon
so has part: feature:1202608-1202792:-1:exon
so has part: feature:1202326-1202485:-1:exon
so has part: feature:1201944-1202034:-1:exon
so has part: feature:1200085-1200279:-1:exon
so has part: feature:1199824-1199958:-1:exon
so has part: feature:1198853-1198954:-1:exon
so has part: feature:1197862-1198061:-1:exon
so has part: feature:1196947-1197443:-1:exon
so has part: feature:1193242-1195821:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1215995-1216127:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1208989-1209172:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1208132-1208252:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1207820-1208001:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1207434-1207570:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1207199-1207333:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1206843-1206930:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1205666-1205813:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1205444-1205563:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1204527-1204649:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1203992-1204125:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1202608-1202792:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1202326-1202485:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1201944-1202034:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1200085-1200279:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1199824-1199958:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1198853-1198954:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1197862-1198061:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1196947-1197443:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1193242-1195821:-1:exon

position:1195821:-1
position: 1195821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100232386
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC100232386
product: argonaute RISC component 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 ESTs, 2 long SRA reads, 46 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 67 samples with support for all annotated introns
transcript id: XM_030290494.3
SIO_010081: LOC100232386
subclass of: SO_0000673
so part of: LOC100232386
location: complement(join(1193242..1197443,1197862..1198061,1198853..1198954,1199824..1199958,1200085..1200279,1201944..1202034,1202326..1202485,1202608..1202792,1203992..1204125,1204527..1204649,1205444..1205563,1205666..1205813,1206843..1206930,1207199..1207333,1207434..1207570,1207820..1208001,1208132..1208252,1208989..1209172,1215995..1216127))
location: region:1193242-1216127:-1
so has part: feature:1215995-1216127:-1:exon
so has part: feature:1208989-1209172:-1:exon
so has part: feature:1208132-1208252:-1:exon
so has part: feature:1207820-1208001:-1:exon
so has part: feature:1207434-1207570:-1:exon
so has part: feature:1207199-1207333:-1:exon
so has part: feature:1206843-1206930:-1:exon
so has part: feature:1205666-1205813:-1:exon
so has part: feature:1205444-1205563:-1:exon
so has part: feature:1204527-1204649:-1:exon
so has part: feature:1203992-1204125:-1:exon
so has part: feature:1202608-1202792:-1:exon
so has part: feature:1202326-1202485:-1:exon
so has part: feature:1201944-1202034:-1:exon
so has part: feature:1200085-1200279:-1:exon
so has part: feature:1199824-1199958:-1:exon
so has part: feature:1198853-1198954:-1:exon
so has part: feature:1197862-1198061:-1:exon
so has part: feature:1193242-1197443:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1215995-1216127:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1208989-1209172:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1208132-1208252:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1207820-1208001:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1207434-1207570:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1207199-1207333:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1206843-1206930:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1205666-1205813:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1205444-1205563:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1204527-1204649:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1203992-1204125:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1202608-1202792:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1202326-1202485:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1201944-1202034:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1200085-1200279:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1199824-1199958:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1198853-1198954:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1197862-1198061:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1193242-1197443:-1:exon

LOC100232386
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC100232386
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein argonaute-1
translation: MEAGPSGAAAGAYLPPLQQVFQAPRRPGIGTVGKPIKLLANYFEVDIPKIDVYHYEVDIKPDKCPRRVNREVVEYMVQHFKPQIFGDRKPVYDGKKNIYTVTALPIGNERVDFEVTIPGEGKDRIFKVSIKWMAIVSWRMLHEALVSGQIPVPLESVQALDVAMRHLASMRYTPVGRSFFSPPEGYYHPLGGGREVWFGFHQSVRPAMWKMMLNIDVSATAFYKAQPVIEFMCEVLDIRNIDEQPKPLTDSQRVRFTKEIKGLKVEVTHCGQMKRKYRVCNVTRRPASHQTFPLQLESGQTVECTVAQYFKQKYNLQLKYPHLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDNQTSTMIKATARSAPDRQEEISRLMKNASYNLDPYIQEFGIKVKDDMTEVTGRVLPAPILQYGGRNRAIATPNQGVWDMRGKQFYNGIEIKVWAIACFAPQKQCREEVLKNFTDQLRKISKDAGMPIQGQPCFCKYAQGADSVEPMFRHLKNTYSGLQLIIVILPGKTPVYAEVKRVGDTLLGMATQCVQVKNVVKTSPQTLSNLCLKINVKLGGINNILVPHQRSAVFQQPVIFLGADVTHPPAGDGKKPSITAVVGSMDAHPSRYCATVRVQRPRQEIIEDLSYMVRELLIQFYKSTRFKPTRIIFYRDGVPEGQLPQILHYELLAIRDACIKLEKDYQPGITYIVVQKRHHTRLFCADKNERIGKSGNIPAGTTVDTNITHPFEFDFYLCSHAGIQGTSRPSHYYVLWDDNRFTADELQILTYQLCHTYVRCTRSVSIPAPAYYARLVAFRARYHLVDKEHDSGEGSHISGQSNGRDPQALAKAVQVHQDTLRTMYFA
SIO_010081: LOC100232386
subclass of: SO_0000673
so part of: LOC100232386
location: complement(join(1197335..1197443,1197862..1198061,1198853..1198954,1199824..1199958,1200085..1200279,1201944..1202034,1202326..1202485,1202608..1202792,1203992..1204125,1204527..1204649,1205444..1205563,1205666..1205813,1206843..1206930,1207199..1207333,1207434..1207570,1207820..1208001,1208132..1208252,1208989..1209172,1215995..1216019))
location: region:1197335-1216019:-1
so has part: feature:1215995-1216019:-1:exon
so has part: feature:1208989-1209172:-1:exon
so has part: feature:1208132-1208252:-1:exon
so has part: feature:1207820-1208001:-1:exon
so has part: feature:1207434-1207570:-1:exon
so has part: feature:1207199-1207333:-1:exon
so has part: feature:1206843-1206930:-1:exon
so has part: feature:1205666-1205813:-1:exon
so has part: feature:1205444-1205563:-1:exon
so has part: feature:1204527-1204649:-1:exon
so has part: feature:1203992-1204125:-1:exon
so has part: feature:1202608-1202792:-1:exon
so has part: feature:1202326-1202485:-1:exon
so has part: feature:1201944-1202034:-1:exon
so has part: feature:1200085-1200279:-1:exon
so has part: feature:1199824-1199958:-1:exon
so has part: feature:1198853-1198954:-1:exon
so has part: feature:1197862-1198061:-1:exon
so has part: feature:1197335-1197443:-1:exon

XP_030146354.1
type: Protein
SIO_000068: ncbiprotein

position:1197335:-1
position: 1197335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1216019:-1
position: 1216019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1215995-1216019:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1208989-1209172:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1208132-1208252:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1207820-1208001:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1207434-1207570:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1207199-1207333:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1206843-1206930:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1205666-1205813:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1205444-1205563:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1204527-1204649:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1203992-1204125:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1202608-1202792:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1202326-1202485:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1201944-1202034:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1200085-1200279:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1199824-1199958:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1198853-1198954:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1197862-1198061:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1197335-1197443:-1:exon

LOC100229500
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC100229500
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1217558..1232547)
location: region:1217558-1232547:-1
so has part: feature:1217558-1232547:-1:exon
subclass of: SO_0000010

100229500
type: Gene
SIO_000068: ncbigene

position:1217558:-1
position: 1217558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1232547:-1
position: 1232547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1217558-1232547:-1:exon

LOC100229500
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC100229500
product: argonaute RISC component 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 ESTs, 5 long SRA reads, 47 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 70 samples with support for all annotated introns
transcript id: XM_030290492.3
SIO_010081: LOC100229500
subclass of: SO_0000673
so part of: LOC100229500
location: complement(join(1217558..1221201,1221295..1221494,1221709..1221810,1222575..1222709,1222969..1223284,1224232..1224391,1224639..1224823,1225290..1225423,1225573..1225701,1225917..1226036,1226113..1226260,1226691..1226778,1226939..1227073,1227154..1227290,1227677..1227858,1228814..1228934,1229581..1229746,1232264..1232547))
location: region:1217558-1232547:-1
so has part: feature:1232264-1232547:-1:exon
so has part: feature:1229581-1229746:-1:exon
so has part: feature:1228814-1228934:-1:exon
so has part: feature:1227677-1227858:-1:exon
so has part: feature:1227154-1227290:-1:exon
so has part: feature:1226939-1227073:-1:exon
so has part: feature:1226691-1226778:-1:exon
so has part: feature:1226113-1226260:-1:exon
so has part: feature:1225917-1226036:-1:exon
so has part: feature:1225573-1225701:-1:exon
so has part: feature:1225290-1225423:-1:exon
so has part: feature:1224639-1224823:-1:exon
so has part: feature:1224232-1224391:-1:exon
so has part: feature:1222969-1223284:-1:exon
so has part: feature:1222575-1222709:-1:exon
so has part: feature:1221709-1221810:-1:exon
so has part: feature:1221295-1221494:-1:exon
so has part: feature:1217558-1221201:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1232264-1232547:-1:exon

position:1232264:-1
position: 1232264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1229581-1229746:-1:exon

position:1229581:-1
position: 1229581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1229746:-1
position: 1229746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1228814-1228934:-1:exon

position:1228814:-1
position: 1228814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1228934:-1
position: 1228934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1227677-1227858:-1:exon

position:1227677:-1
position: 1227677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1227858:-1
position: 1227858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1227154-1227290:-1:exon

position:1227154:-1
position: 1227154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1227290:-1
position: 1227290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1226939-1227073:-1:exon

position:1226939:-1
position: 1226939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1227073:-1
position: 1227073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1226691-1226778:-1:exon

position:1226691:-1
position: 1226691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1226778:-1
position: 1226778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition