Taeniopygia guttata isolate Blue55 chromosome 21, bTaeGut1.4.pri, whole genome shotgun sequence.
type: Entry
definition: Taeniopygia guttata isolate Blue55 chromosome 21, bTaeGut1.4.pri, whole genome shotgun sequence.
sequence version: NC_044233.2
sequence date: 2021-05-26
sequence: sequence
division: CON
label: NC_044233.2
type: RefSeq
SIO_000068: refseq
dblink: PRJNA558048
dblink: SAMN02981239
keyword: WGS
keyword: RefSeq
source: Taeniopygia guttata (zebra finch)
organism: Taeniopygia guttata
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Taeniopygia.
reference: 1
references: 33911273
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM012103.2.\nOn May 24, 2021 this sequence version replaced NC_044233.1.\nAssembly name: bTaeGut1.4.pri\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2021/05/04. The original whole-genome shotgun project has the\naccession RRCB00000000.2.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 09-APR-2021\nAssembly Method :: FALCON v. 5.1.1; FALCON unzip v.\n Nov2017(uc4); Purge_dups v. 1.0.1;\n Scaff10X v. 4.1.0; Bionano Solve\n BspQI/BssSI v. 3.4; Salsa2 v. 2.2.; Arrow\n polishing v. variantCaller 2.3.3; Merfin\n filtering v. 0.1; longranger align v.\n 2.2.2; freebayes polishing v. 1.3.1;\n gEVAL manual curation v. 2021-04-09; VGP\n pipeline v. 1.7\nAssembly Name :: bTaeGut1.4.pri\nDiploid :: Principal Pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 88.2x\nSequencing Technology :: PacBio RSII; 10X Genomics linked reads;\n Bionano Genomics two enzymes; Arima\n Genomics Hi-C\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Taeniopygia guttata Annotation\n Release 106\nAnnotation Version :: 106\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.6\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 7924511
topology: linear
so has quality: SO_0000987
location: 1..7924511
location: region:1-7924511:1
RO_0002162: 59729

NC_044233
type: RefSeq
SIO_000068: refseq

PRJNA558048
type: BioProject
SIO_000068: bioproject

SAMN02981239
type: BioSample
SIO_000068: biosample

1
title: Towards complete and error-free genome assemblies of all vertebrate species
author: Rhie, A.
author: McCarthy, S.A.
author: Fedrigo, O.
author: Damas, J.
author: Formenti, G.
author: Koren, S.
author: Uliano-Silva, M.
author: Chow, W.
author: Fungtammasan, A.
author: Kim, J.
author: Lee, C.
author: Ko, B.J.
author: Chaisson, M.
author: Gedman, G.L.
author: Cantin, L.J.
author: Thibaud-Nissen, F.
author: Haggerty, L.
author: Bista, I.
author: Smith, M.
author: Haase, B.
author: Mountcastle, J.
author: Winkler, S.
author: Paez, S.
author: Howard, J.
author: Vernes, S.C.
author: Lama, T.M.
author: Grutzner, F.
author: Warren, W.C.
author: Balakrishnan, C.N.
author: Burt, D.
author: George, J.M.
author: Biegler, M.T.
author: Iorns, D.
author: Digby, A.
author: Eason, D.
author: Robertson, B.
author: Edwards, T.
author: Wilkinson, M.
author: Turner, G.
author: Meyer, A.
author: Kautt, A.F.
author: Franchini, P.
author: Detrich, H.W. 3rd
author: Svardal, H.
author: Wagner, M.
author: Naylor, G.J.P.
author: Pippel, M.
author: Malinsky, M.
author: Mooney, M.
author: Simbirsky, M.
author: Hannigan, B.T.
author: Pesout, T.
author: Houck, M.
author: Misuraca, A.
author: Kingan, S.B.
author: Hall, R.
author: Kronenberg, Z.
author: Sovic, I.
author: Dunn, C.
author: Ning, Z.
author: Hastie, A.
author: Lee, J.
author: Selvaraj, S.
author: Green, R.E.
author: Putnam, N.H.
author: Gut, I.
author: Ghurye, J.
author: Garrison, E.
author: Sims, Y.
author: Collins, J.
author: Pelan, S.
author: Torrance, J.
author: Tracey, A.
author: Wood, J.
author: Dagnew, R.E.
author: Guan, D.
author: London, S.E.
author: Clayton, D.F.

33911273
type: PubMed
SIO_000068: pubmed

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7924511:1
position: 7924511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-7924511:1:source
so part of: sequence
organism: Taeniopygia guttata
mol type: genomic DNA
isolate: Blue55
chromosome: 21
sex: female
tissue type: Muscle, blood, brain
dev stage: adult
country: USA
lat lon: 36.0014 N 78.9382 W
collected by: Matt Biegler, Duke University and Rockefeller University

59729
type: Taxonomy
SIO_000068: taxonomy

LOC121470986
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121470986
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2919..4830)
location: region:2919-4830:-1
so has part: feature:2919-4830:-1:exon
subclass of: SO_0000011

121470986
type: Gene
SIO_000068: ncbigene

position:2919:-1
position: 2919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4830:-1
position: 4830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2919-4830:-1:exon

LOC121470986
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC121470986
product: uncharacterized LOC121470986
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XR_005982344.1
SIO_010081: LOC121470986
subclass of: SO_0000673
so part of: LOC121470986
location: complement(join(2919..3598,3686..4830))
location: region:2919-4830:-1
so has part: feature:3686-4830:-1:exon
so has part: feature:2919-3598:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3686-4830:-1:exon

position:3686:-1
position: 3686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2919-3598:-1:exon

position:3598:-1
position: 3598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121470987
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121470987
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5784..6297)
location: region:5784-6297:-1
so has part: feature:5784-6297:-1:exon
subclass of: SO_0000011

121470987
type: Gene
SIO_000068: ncbigene

position:5784:-1
position: 5784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6297:-1
position: 6297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5784-6297:-1:exon

LOC121470987
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC121470987
product: uncharacterized LOC121470987
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 50 samples with support for all annotated introns
transcript id: XR_005982345.1
SIO_010081: LOC121470987
subclass of: SO_0000673
so part of: LOC121470987
location: complement(join(5784..6156,6244..6297))
location: region:5784-6297:-1
so has part: feature:6244-6297:-1:exon
so has part: feature:5784-6156:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6244-6297:-1:exon

position:6244:-1
position: 6244
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 2
SIO_000628: feature:5784-6156:-1:exon

position:6156:-1
position: 6156
reference: sequence
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type: ExactPosition

LOC121470988
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121470988
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7186..7704)
location: region:7186-7704:-1
so has part: feature:7186-7704:-1:exon
subclass of: SO_0000011

121470988
type: Gene
SIO_000068: ncbigene

position:7186:-1
position: 7186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7704:-1
position: 7704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7186-7704:-1:exon

LOC121470988
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC121470988
product: uncharacterized LOC121470988
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XR_005982346.1
SIO_010081: LOC121470988
subclass of: SO_0000673
so part of: LOC121470988
location: complement(join(7186..7248,7461..7704))
location: region:7186-7704:-1
so has part: feature:7461-7704:-1:exon
so has part: feature:7186-7248:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7461-7704:-1:exon

position:7461:-1
position: 7461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7186-7248:-1:exon

position:7248:-1
position: 7248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116807502
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC116807502
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(10625..14220)
location: region:10625-14220:-1
so has part: feature:10625-14220:-1:exon
subclass of: SO_0000011

116807502
type: Gene
SIO_000068: ncbigene

position:10625:-1
position: 10625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14220:-1
position: 14220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10625-14220:-1:exon

LOC116807502
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC116807502
product: uncharacterized LOC116807502
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 71 samples with support for all annotated introns
transcript id: XR_005982336.1
SIO_010081: LOC116807502
subclass of: SO_0000673
so part of: LOC116807502
location: complement(join(10625..11473,11700..14220))
location: region:10625-14220:-1
so has part: feature:11700-14220:-1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:11700-14220:-1:exon

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urn:…
SIO_000300: 2
SIO_000628: feature:10625-11473:-1:exon

position:11473:-1
position: 11473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SCNN1D
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: SCNN1D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(14409..32135)
location: region:14409-32135:-1
so has part: feature:14409-32135:-1:exon
subclass of: SO_0000010

100220296
type: Gene
SIO_000068: ncbigene

position:14409:-1
position: 14409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32135:-1
position: 32135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14409-32135:-1:exon

SCNN1D
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: SCNN1D
product: sodium channel epithelial 1 subunit delta, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_041720357.1
SIO_010081: SCNN1D
subclass of: SO_0000673
so part of: SCNN1D
location: complement(join(14409..15421,18281..18336,18833..18890,19742..19820,20307..20424,21395..21558,21736..21839,22470..22657,23487..23823,24010..24359,27741..31762,31985..32135))
location: region:14409-32135:-1
so has part: feature:31985-32135:-1:exon
so has part: feature:27741-31762:-1:exon
so has part: feature:24010-24359:-1:exon
so has part: feature:23487-23823:-1:exon
so has part: feature:22470-22657:-1:exon
so has part: feature:21736-21839:-1:exon
so has part: feature:21395-21558:-1:exon
so has part: feature:20307-20424:-1:exon
so has part: feature:19742-19820:-1:exon
so has part: feature:18833-18890:-1:exon
so has part: feature:18281-18336:-1:exon
so has part: feature:14409-15421:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:31985-32135:-1:exon

position:31985:-1
position: 31985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:27741-31762:-1:exon

position:27741:-1
position: 27741
reference: sequence
type: ReverseStrandPosition
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position:31762:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 3
SIO_000628: feature:24010-24359:-1:exon

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urn:…
SIO_000300: 4
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reference: sequence
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urn:…
SIO_000300: 5
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 6
SIO_000628: feature:21736-21839:-1:exon

position:21736:-1
position: 21736
reference: sequence
type: ReverseStrandPosition
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position:21839:-1
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reference: sequence
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urn:…
SIO_000300: 7
SIO_000628: feature:21395-21558:-1:exon

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urn:…
SIO_000300: 8
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urn:…
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reference: sequence
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urn:…
SIO_000300: 10
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urn:…
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urn:…
SIO_000300: 12
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reference: sequence
type: ReverseStrandPosition
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SCNN1D
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: SCNN1D
product: sodium channel epithelial 1 subunit delta, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_041720355.1
SIO_010081: SCNN1D
subclass of: SO_0000673
so part of: SCNN1D
location: complement(join(14409..15421,18281..18336,18833..18890,19742..19820,20307..20424,20985..21083,21395..21558,21736..21839,22470..22657,23487..23823,24010..24359,27741..31762,31985..32135))
location: region:14409-32135:-1
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so has part: feature:24010-24359:-1:exon
so has part: feature:23487-23823:-1:exon
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so has part: feature:14409-15421:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:31985-32135:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:27741-31762:-1:exon

urn:…
SIO_000300: 3
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urn:…
SIO_000300: 4
SIO_000628: feature:23487-23823:-1:exon

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SIO_000300: 5
SIO_000628: feature:22470-22657:-1:exon

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SIO_000628: feature:21736-21839:-1:exon

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SIO_000628: feature:21395-21558:-1:exon

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reference: sequence
type: ReverseStrandPosition
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urn:…
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SIO_000628: feature:20307-20424:-1:exon

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SIO_000300: 10
SIO_000628: feature:19742-19820:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:18833-18890:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:18281-18336:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:14409-15421:-1:exon

SCNN1D
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: SCNN1D
product: sodium channel epithelial 1 subunit delta, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_041720356.1
SIO_010081: SCNN1D
subclass of: SO_0000673
so part of: SCNN1D
location: complement(join(14409..15421,18281..18336,18833..18890,19742..19820,20307..20424,20985..21083,21395..21558,21736..21839,22470..22657,23487..23823,24010..25917))
location: region:14409-25917:-1
so has part: feature:24010-25917:-1:exon
so has part: feature:23487-23823:-1:exon
so has part: feature:22470-22657:-1:exon
so has part: feature:21736-21839:-1:exon
so has part: feature:21395-21558:-1:exon
so has part: feature:20985-21083:-1:exon
so has part: feature:20307-20424:-1:exon
so has part: feature:19742-19820:-1:exon
so has part: feature:18833-18890:-1:exon
so has part: feature:18281-18336:-1:exon
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reference: sequence
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urn:…
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SIO_000628: feature:24010-25917:-1:exon

urn:…
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urn:…
SIO_000300: 3
SIO_000628: feature:22470-22657:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:21736-21839:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:21395-21558:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:20985-21083:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:20307-20424:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:19742-19820:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:18833-18890:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:18281-18336:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:14409-15421:-1:exon

SCNN1D
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: SCNN1D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: amiloride-sensitive sodium channel subunit delta isoform X2
translation: MEPEPPGGEERGGEEPGEEGLIEFYSSFKEMFEFFCKNTTIHGTVRLVCSGRNRAKTAFWTLLLLASLAMLYWQFALMFSQFWAYPVVLTMSMDSEPKMFPAVTVCNLDPYRFEPISEQLEQLERMAEESLTFLYGPTASARLSHQRDRDKDEDKNRDKERNKDKDRDKEKDKDRDKGRDRDKAIPVQHQANLSTNFRLSQNFSLVRMWEPGAGRKHSRVGFQLCNSTGGDCFYSSHVSGTAALQEWFRFHFINLLAQLPPALARYPRRFQDLVYSCQYDGEPCRSSDYVPFHHPVFGSCYTFNSKGTDPFWRATKPGIPYGLSLILRAEQQEHIPLLSTVAGVKVMIHSHNQTPFLEHEGFHIRPGIATTIGIRQACLHSCFQLAMLRHCGCGYIYYPLPAGARYCDYHRQPAWGHCFYQLHWRLHSHRLDCFQHCPKPCRESLYKVSAGTAKWPSAKAQDWVHQALRHQNDYSFSSRRRTCCCPAWAASGASGLAPRCSRWWRCWSCSWTPWSCPCSSASRGSTLGGAPGPSQIPGRIPICGRSPGRCRSGIWDSPESERVGIPKFWGKSHRDVLEPQLNMAMLGIPKFWGKSHRDPHLRGLEFPNLGGKSQGSTAERGGIPKSWGTVTGMFCIHS
SIO_010081: SCNN1D
subclass of: SO_0000673
so part of: SCNN1D
location: complement(join(14944..15421,18281..18336,18833..18890,19742..19820,20307..20424,21395..21558,21736..21839,22470..22657,23487..23823,24010..24344))
location: region:14944-24344:-1
so has part: feature:24010-24344:-1:exon
so has part: feature:23487-23823:-1:exon
so has part: feature:22470-22657:-1:exon
so has part: feature:21736-21839:-1:exon
so has part: feature:21395-21558:-1:exon
so has part: feature:20307-20424:-1:exon
so has part: feature:19742-19820:-1:exon
so has part: feature:18833-18890:-1:exon
so has part: feature:18281-18336:-1:exon
so has part: feature:14944-15421:-1:exon

XP_041576291.1
type: Protein
SIO_000068: ncbiprotein

position:14944:-1
position: 14944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24344:-1
position: 24344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24010-24344:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:23487-23823:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:22470-22657:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:21736-21839:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:21395-21558:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:20307-20424:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:19742-19820:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:18833-18890:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:18281-18336:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:14944-15421:-1:exon

SCNN1D
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: SCNN1D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: amiloride-sensitive sodium channel subunit delta isoform X1
translation: MEPEPPGGEERGGEEPGEEGLIEFYSSFKEMFEFFCKNTTIHGTVRLVCSGRNRAKTAFWTLLLLASLAMLYWQFALMFSQFWAYPVVLTMSMDSEPKMFPAVTVCNLDPYRFEPISEQLEQLERMAEESLTFLYGPTASARLSHQRDRDKDEDKNRDKERNKDKDRDKEKDKDRDKGRDRDKAIPVQHQANLSTNFRLSQNFSLVRMWEPGAGRKHSRVGFQLCNSTGGDCFYSSHVSGTAALQEWFRFHFINLLAQLPPALARYPRRFQDLVYSCQYDGEPCRSSDYVPFHHPVFGSCYTFNSKGTDPFWRATKPGIPYGLSLILRAEQQEHIPLLSTVAGVKVMIHSHNQTPFLEHEGFHIRPGIATTIGIRQDQVNRLGGNYGKCTADGADVAVELLYNSSYTLQACLHSCFQLAMLRHCGCGYIYYPLPAGARYCDYHRQPAWGHCFYQLHWRLHSHRLDCFQHCPKPCRESLYKVSAGTAKWPSAKAQDWVHQALRHQNDYSFSSRRRTCCCPAWAASGASGLAPRCSRWWRCWSCSWTPWSCPCSSASRGSTLGGAPGPSQIPGRIPICGRSPGRCRSGIWDSPESERVGIPKFWGKSHRDVLEPQLNMAMLGIPKFWGKSHRDPHLRGLEFPNLGGKSQGSTAERGGIPKSWGTVTGMFCIHS
SIO_010081: SCNN1D
subclass of: SO_0000673
so part of: SCNN1D
location: complement(join(14944..15421,18281..18336,18833..18890,19742..19820,20307..20424,20985..21083,21395..21558,21736..21839,22470..22657,23487..23823,24010..24344))
location: region:14944-24344:-1
so has part: feature:24010-24344:-1:exon
so has part: feature:23487-23823:-1:exon
so has part: feature:22470-22657:-1:exon
so has part: feature:21736-21839:-1:exon
so has part: feature:21395-21558:-1:exon
so has part: feature:20985-21083:-1:exon
so has part: feature:20307-20424:-1:exon
so has part: feature:19742-19820:-1:exon
so has part: feature:18833-18890:-1:exon
so has part: feature:18281-18336:-1:exon
so has part: feature:14944-15421:-1:exon

XP_041576289.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24010-24344:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:23487-23823:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:22470-22657:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:21736-21839:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:21395-21558:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:20985-21083:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:20307-20424:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:19742-19820:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:18833-18890:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:18281-18336:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:14944-15421:-1:exon

SCNN1D
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: SCNN1D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: amiloride-sensitive sodium channel subunit delta isoform X1
translation: MEPEPPGGEERGGEEPGEEGLIEFYSSFKEMFEFFCKNTTIHGTVRLVCSGRNRAKTAFWTLLLLASLAMLYWQFALMFSQFWAYPVVLTMSMDSEPKMFPAVTVCNLDPYRFEPISEQLEQLERMAEESLTFLYGPTASARLSHQRDRDKDEDKNRDKERNKDKDRDKEKDKDRDKGRDRDKAIPVQHQANLSTNFRLSQNFSLVRMWEPGAGRKHSRVGFQLCNSTGGDCFYSSHVSGTAALQEWFRFHFINLLAQLPPALARYPRRFQDLVYSCQYDGEPCRSSDYVPFHHPVFGSCYTFNSKGTDPFWRATKPGIPYGLSLILRAEQQEHIPLLSTVAGVKVMIHSHNQTPFLEHEGFHIRPGIATTIGIRQDQVNRLGGNYGKCTADGADVAVELLYNSSYTLQACLHSCFQLAMLRHCGCGYIYYPLPAGARYCDYHRQPAWGHCFYQLHWRLHSHRLDCFQHCPKPCRESLYKVSAGTAKWPSAKAQDWVHQALRHQNDYSFSSRRRTCCCPAWAASGASGLAPRCSRWWRCWSCSWTPWSCPCSSASRGSTLGGAPGPSQIPGRIPICGRSPGRCRSGIWDSPESERVGIPKFWGKSHRDVLEPQLNMAMLGIPKFWGKSHRDPHLRGLEFPNLGGKSQGSTAERGGIPKSWGTVTGMFCIHS
SIO_010081: SCNN1D
subclass of: SO_0000673
so part of: SCNN1D
location: complement(join(14944..15421,18281..18336,18833..18890,19742..19820,20307..20424,20985..21083,21395..21558,21736..21839,22470..22657,23487..23823,24010..24344))
location: region:14944-24344:-1
so has part: feature:24010-24344:-1:exon
so has part: feature:23487-23823:-1:exon
so has part: feature:22470-22657:-1:exon
so has part: feature:21736-21839:-1:exon
so has part: feature:21395-21558:-1:exon
so has part: feature:20985-21083:-1:exon
so has part: feature:20307-20424:-1:exon
so has part: feature:19742-19820:-1:exon
so has part: feature:18833-18890:-1:exon
so has part: feature:18281-18336:-1:exon
so has part: feature:14944-15421:-1:exon

XP_041576290.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24010-24344:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:23487-23823:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:22470-22657:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:21736-21839:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:21395-21558:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:20985-21083:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:20307-20424:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:19742-19820:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:18833-18890:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:18281-18336:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:14944-15421:-1:exon

SCNN1D
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: SCNN1D
product: sodium channel epithelial 1 subunit delta, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_041720358.1
SIO_010081: SCNN1D
subclass of: SO_0000673
so part of: SCNN1D
location: complement(join(15040..15421,17597..17672,18281..18336,18833..18890,19742..19820,20307..20424,20985..21083,21395..21558,21736..21839,22470..22657,23487..23823,24010..24359,27741..31762,31985..32135))
location: region:15040-32135:-1
so has part: feature:31985-32135:-1:exon
so has part: feature:27741-31762:-1:exon
so has part: feature:24010-24359:-1:exon
so has part: feature:23487-23823:-1:exon
so has part: feature:22470-22657:-1:exon
so has part: feature:21736-21839:-1:exon
so has part: feature:21395-21558:-1:exon
so has part: feature:20985-21083:-1:exon
so has part: feature:20307-20424:-1:exon
so has part: feature:19742-19820:-1:exon
so has part: feature:18833-18890:-1:exon
so has part: feature:18281-18336:-1:exon
so has part: feature:17597-17672:-1:exon
so has part: feature:15040-15421:-1:exon

position:15040:-1
position: 15040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31985-32135:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:27741-31762:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:24010-24359:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:23487-23823:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:22470-22657:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:21736-21839:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:21395-21558:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:20985-21083:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:20307-20424:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:19742-19820:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:18833-18890:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:18281-18336:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:17597-17672:-1:exon

position:17597:-1
position: 17597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17672:-1
position: 17672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:15040-15421:-1:exon

SCNN1D
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: SCNN1D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: amiloride-sensitive sodium channel subunit delta isoform X3
translation: MEPEPPGGEERGGEEPGEEGLIEFYSSFKEMFEFFCKNTTIHGTVRLVCSGRNRAKTAFWTLLLLASLAMLYWQFALMFSQFWAYPVVLTMSMDSEPKMFPAVTVCNLDPYRFEPISEQLEQLERMAEESLTFLYGPTASARLSHQRDRDKDEDKNRDKERNKDKDRDKEKDKDRDKGRDRDKAIPVQHQANLSTNFRLSQNFSLVRMWEPGAGRKHSRVGFQLCNSTGGDCFYSSHVSGTAALQEWFRFHFINLLAQLPPALARYPRRFQDLVYSCQYDGEPCRSSDYVPFHHPVFGSCYTFNSKGTDPFWRATKPGIPYGLSLILRAEQQEHIPLLSTVAGVKVMIHSHNQTPFLEHEGFHIRPGIATTIGIRQDQVNRLGGNYGKCTADGADVAVELLYNSSYTLQACLHSCFQLAMLRHCGCGYIYYPLPAGARYCDYHRQPAWGHCFYQLHWRLHSHRLDCFQHCPKPCRESLYKVSAGTAKWPSAKAQDWVHQALRHQNDYSFSSRRRDVAKVTIFYRQLSSQAVREAPLLSENLLLSSMGSQWSLWFGSSVLSVVEMLELLLDTLVLSLLFCFQRFHARRSPRPIPNSRENSHMREEPRKVQEWDLGQP
SIO_010081: SCNN1D
subclass of: SO_0000673
so part of: SCNN1D
location: complement(join(15185..15421,17597..17672,18281..18336,18833..18890,19742..19820,20307..20424,20985..21083,21395..21558,21736..21839,22470..22657,23487..23823,24010..24344))
location: region:15185-24344:-1
so has part: feature:24010-24344:-1:exon
so has part: feature:23487-23823:-1:exon
so has part: feature:22470-22657:-1:exon
so has part: feature:21736-21839:-1:exon
so has part: feature:21395-21558:-1:exon
so has part: feature:20985-21083:-1:exon
so has part: feature:20307-20424:-1:exon
so has part: feature:19742-19820:-1:exon
so has part: feature:18833-18890:-1:exon
so has part: feature:18281-18336:-1:exon
so has part: feature:17597-17672:-1:exon
so has part: feature:15185-15421:-1:exon

XP_041576292.1
type: Protein
SIO_000068: ncbiprotein

position:15185:-1
position: 15185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24010-24344:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:23487-23823:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:22470-22657:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:21736-21839:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:21395-21558:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:20985-21083:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:20307-20424:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:19742-19820:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:18833-18890:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:18281-18336:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:17597-17672:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:15185-15421:-1:exon

SCNN1D
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: SCNN1D
product: sodium channel epithelial 1 subunit delta, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_041720359.1
SIO_010081: SCNN1D
subclass of: SO_0000673
so part of: SCNN1D
location: complement(join(15482..15867,17597..17672,18281..18336,18833..18890,19742..19820,20307..20424,20985..21083,21395..21558,21736..21839,22470..22657,23487..23823,24010..24359,27741..31762,31985..32135))
location: region:15482-32135:-1
so has part: feature:31985-32135:-1:exon
so has part: feature:27741-31762:-1:exon
so has part: feature:24010-24359:-1:exon
so has part: feature:23487-23823:-1:exon
so has part: feature:22470-22657:-1:exon
so has part: feature:21736-21839:-1:exon
so has part: feature:21395-21558:-1:exon
so has part: feature:20985-21083:-1:exon
so has part: feature:20307-20424:-1:exon
so has part: feature:19742-19820:-1:exon
so has part: feature:18833-18890:-1:exon
so has part: feature:18281-18336:-1:exon
so has part: feature:17597-17672:-1:exon
so has part: feature:15482-15867:-1:exon

position:15482:-1
position: 15482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31985-32135:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:27741-31762:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:24010-24359:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:23487-23823:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:22470-22657:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:21736-21839:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:21395-21558:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:20985-21083:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:20307-20424:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:19742-19820:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:18833-18890:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:18281-18336:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:17597-17672:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:15482-15867:-1:exon

position:15867:-1
position: 15867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SCNN1D
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: SCNN1D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: amiloride-sensitive sodium channel subunit delta isoform X4
translation: MEPEPPGGEERGGEEPGEEGLIEFYSSFKEMFEFFCKNTTIHGTVRLVCSGRNRAKTAFWTLLLLASLAMLYWQFALMFSQFWAYPVVLTMSMDSEPKMFPAVTVCNLDPYRFEPISEQLEQLERMAEESLTFLYGPTASARLSHQRDRDKDEDKNRDKERNKDKDRDKEKDKDRDKGRDRDKAIPVQHQANLSTNFRLSQNFSLVRMWEPGAGRKHSRVGFQLCNSTGGDCFYSSHVSGTAALQEWFRFHFINLLAQLPPALARYPRRFQDLVYSCQYDGEPCRSSDYVPFHHPVFGSCYTFNSKGTDPFWRATKPGIPYGLSLILRAEQQEHIPLLSTVAGVKVMIHSHNQTPFLEHEGFHIRPGIATTIGIRQDQVNRLGGNYGKCTADGADVAVELLYNSSYTLQACLHSCFQLAMLRHCGCGYIYYPLPAGARYCDYHRQPAWGHCFYQLHWRLHSHRLDCFQHCPKPCRESLYKVSAGTAKWPSAKAQDWVHQALRHQNDYSFSSRRRDVAKVTIFYRQLSSQAVREAPLLSENLLLSSMGSQWNLWFVLVLGFSFRENYWENEPLIPYAPNLGVRNIKNHKKSK
SIO_010081: SCNN1D
subclass of: SO_0000673
so part of: SCNN1D
location: complement(join(15706..15867,17597..17672,18281..18336,18833..18890,19742..19820,20307..20424,20985..21083,21395..21558,21736..21839,22470..22657,23487..23823,24010..24344))
location: region:15706-24344:-1
so has part: feature:24010-24344:-1:exon
so has part: feature:23487-23823:-1:exon
so has part: feature:22470-22657:-1:exon
so has part: feature:21736-21839:-1:exon
so has part: feature:21395-21558:-1:exon
so has part: feature:20985-21083:-1:exon
so has part: feature:20307-20424:-1:exon
so has part: feature:19742-19820:-1:exon
so has part: feature:18833-18890:-1:exon
so has part: feature:18281-18336:-1:exon
so has part: feature:17597-17672:-1:exon
so has part: feature:15706-15867:-1:exon

XP_041576293.1
type: Protein
SIO_000068: ncbiprotein

position:15706:-1
position: 15706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24010-24344:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:23487-23823:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:22470-22657:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:21736-21839:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:21395-21558:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:20985-21083:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:20307-20424:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:19742-19820:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:18833-18890:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:18281-18336:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:17597-17672:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:15706-15867:-1:exon

UBE2J2
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: UBE2J2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 32177..38470
location: region:32177-38470:1
so has part: feature:32177-38470:1:exon
subclass of: SO_0000010

100222187
type: Gene
SIO_000068: ncbigene

position:32177:1
position: 32177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38470:1
position: 38470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32177-38470:1:exon

UBE2J2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: UBE2J2
product: ubiquitin conjugating enzyme E2 J2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 93 samples with support for all annotated introns
transcript id: XM_030289171.3
SIO_010081: UBE2J2
subclass of: SO_0000673
so part of: UBE2J2
location: join(32177..32307,33709..33939,34448..34488,35066..35168,35470..35608,36195..36275,36775..38470)
location: region:32177-38470:1
so has part: feature:32177-32307:1:exon
so has part: feature:33709-33939:1:exon
so has part: feature:34448-34488:1:exon
so has part: feature:35066-35168:1:exon
so has part: feature:35470-35608:1:exon
so has part: feature:36195-36275:1:exon
so has part: feature:36775-38470:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:32177-32307:1:exon

position:32307:1
position: 32307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:33709-33939:1:exon

position:33709:1
position: 33709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33939:1
position: 33939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:34448-34488:1:exon

position:34448:1
position: 34448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34488:1
position: 34488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:35066-35168:1:exon

position:35066:1
position: 35066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35168:1
position: 35168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:35470-35608:1:exon

position:35470:1
position: 35470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35608:1
position: 35608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:36195-36275:1:exon

position:36195:1
position: 36195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36275:1
position: 36275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:36775-38470:1:exon

position:36775:1
position: 36775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

UBE2J2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: UBE2J2
product: ubiquitin conjugating enzyme E2 J2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 96 samples with support for all annotated introns
transcript id: XM_030289172.3
SIO_010081: UBE2J2
subclass of: SO_0000673
so part of: UBE2J2
location: join(32182..32307,33809..33939,34448..34488,35066..35168,35470..35608,36195..36275,36775..38470)
location: region:32182-38470:1
so has part: feature:32182-32307:1:exon
so has part: feature:33809-33939:1:exon
so has part: feature:34448-34488:1:exon
so has part: feature:35066-35168:1:exon
so has part: feature:35470-35608:1:exon
so has part: feature:36195-36275:1:exon
so has part: feature:36775-38470:1:exon

position:32182:1
position: 32182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32182-32307:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:33809-33939:1:exon

position:33809:1
position: 33809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:34448-34488:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:35066-35168:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:35470-35608:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:36195-36275:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:36775-38470:1:exon

UBE2J2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: UBE2J2
product: ubiquitin conjugating enzyme E2 J2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 132 samples with support for all annotated introns
transcript id: XM_012570446.4
SIO_010081: UBE2J2
subclass of: SO_0000673
so part of: UBE2J2
location: join(33538..33939,34448..34488,35066..35168,35470..35608,36195..36275,36775..38470)
location: region:33538-38470:1
so has part: feature:33538-33939:1:exon
so has part: feature:34448-34488:1:exon
so has part: feature:35066-35168:1:exon
so has part: feature:35470-35608:1:exon
so has part: feature:36195-36275:1:exon
so has part: feature:36775-38470:1:exon

position:33538:1
position: 33538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33538-33939:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:34448-34488:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:35066-35168:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:35470-35608:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:36195-36275:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:36775-38470:1:exon

UBE2J2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: UBE2J2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-conjugating enzyme E2 J2
translation: MSSSSAKRAPTTATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPELTPYEGGYYHGKLIFPREFPFKPPSIYMITPNGRFKCNTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGPTLGSIETSEFTKRQLAAQSLAFNLKDKVFCELFPEVVEEMKQKQKAQEELSSRPPSLPLPDVVPDGDAHLGHNGHPLAHGPAAPLPGHARGLQQPPRNHGLLGGALANLFVIVGFAAFAYTVKYVLRSIAQE
SIO_010081: UBE2J2
subclass of: SO_0000673
so part of: UBE2J2
location: join(33809..33939,34448..34488,35066..35168,35470..35608,36195..36275,36775..37059)
location: region:33809-37059:1
so has part: feature:33809-33939:1:exon
so has part: feature:34448-34488:1:exon
so has part: feature:35066-35168:1:exon
so has part: feature:35470-35608:1:exon
so has part: feature:36195-36275:1:exon
so has part: feature:36775-37059:1:exon

XP_030145031.1
type: Protein
SIO_000068: ncbiprotein

position:37059:1
position: 37059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33809-33939:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:34448-34488:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:35066-35168:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:35470-35608:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:36195-36275:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:36775-37059:1:exon

UBE2J2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: UBE2J2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-conjugating enzyme E2 J2
translation: MSSSSAKRAPTTATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPELTPYEGGYYHGKLIFPREFPFKPPSIYMITPNGRFKCNTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGPTLGSIETSEFTKRQLAAQSLAFNLKDKVFCELFPEVVEEMKQKQKAQEELSSRPPSLPLPDVVPDGDAHLGHNGHPLAHGPAAPLPGHARGLQQPPRNHGLLGGALANLFVIVGFAAFAYTVKYVLRSIAQE
SIO_010081: UBE2J2
subclass of: SO_0000673
so part of: UBE2J2
location: join(33809..33939,34448..34488,35066..35168,35470..35608,36195..36275,36775..37059)
location: region:33809-37059:1
so has part: feature:33809-33939:1:exon
so has part: feature:34448-34488:1:exon
so has part: feature:35066-35168:1:exon
so has part: feature:35470-35608:1:exon
so has part: feature:36195-36275:1:exon
so has part: feature:36775-37059:1:exon

XP_030145032.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33809-33939:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:34448-34488:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:35066-35168:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:35470-35608:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:36195-36275:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:36775-37059:1:exon

UBE2J2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: UBE2J2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-conjugating enzyme E2 J2
translation: MSSSSAKRAPTTATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPELTPYEGGYYHGKLIFPREFPFKPPSIYMITPNGRFKCNTRLCLSITDFHPDTWNPAWSVSTILTGLLSFMVEKGPTLGSIETSEFTKRQLAAQSLAFNLKDKVFCELFPEVVEEMKQKQKAQEELSSRPPSLPLPDVVPDGDAHLGHNGHPLAHGPAAPLPGHARGLQQPPRNHGLLGGALANLFVIVGFAAFAYTVKYVLRSIAQE
SIO_010081: UBE2J2
subclass of: SO_0000673
so part of: UBE2J2
location: join(33809..33939,34448..34488,35066..35168,35470..35608,36195..36275,36775..37059)
location: region:33809-37059:1
so has part: feature:33809-33939:1:exon
so has part: feature:34448-34488:1:exon
so has part: feature:35066-35168:1:exon
so has part: feature:35470-35608:1:exon
so has part: feature:36195-36275:1:exon
so has part: feature:36775-37059:1:exon

XP_012425900.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33809-33939:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:34448-34488:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:35066-35168:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:35470-35608:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:36195-36275:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:36775-37059:1:exon

C1QTNF12
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: C1QTNF12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 41359..56629
location: region:41359-56629:1
so has part: feature:41359-56629:1:exon
subclass of: SO_0000010

100223193
type: Gene
SIO_000068: ncbigene

position:41359:1
position: 41359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:56629:1
position: 56629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41359-56629:1:exon

C1QTNF12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: C1QTNF12
product: C1q and TNF related 12, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041720476.1
SIO_010081: C1QTNF12
subclass of: SO_0000673
so part of: C1QTNF12
location: join(41359..44271,44812..44931,45535..45646,46451..46632,47417..47525,47920..48010,48691..48769,54488..56629)
location: region:41359-56629:1
so has part: feature:41359-44271:1:exon
so has part: feature:44812-44931:1:exon
so has part: feature:45535-45646:1:exon
so has part: feature:46451-46632:1:exon
so has part: feature:47417-47525:1:exon
so has part: feature:47920-48010:1:exon
so has part: feature:48691-48769:1:exon
so has part: feature:54488-56629:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:41359-44271:1:exon

position:44271:1
position: 44271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:44812-44931:1:exon

position:44812:1
position: 44812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44931:1
position: 44931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:45535-45646:1:exon

position:45535:1
position: 45535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45646:1
position: 45646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:46451-46632:1:exon

position:46451:1
position: 46451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46632:1
position: 46632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:47417-47525:1:exon

position:47417:1
position: 47417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47525:1
position: 47525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:47920-48010:1:exon

position:47920:1
position: 47920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48010:1
position: 48010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:48691-48769:1:exon

position:48691:1
position: 48691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48769:1
position: 48769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:54488-56629:1:exon

position:54488:1
position: 54488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

C1QTNF12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: C1QTNF12
product: C1q and TNF related 12, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_030289561.3
SIO_010081: C1QTNF12
subclass of: SO_0000673
so part of: C1QTNF12
location: join(41696..44271,44812..44931,45535..45646,46451..46632,47417..47525,47920..48010,48691..48769,49937..50571)
location: region:41696-50571:1
so has part: feature:41696-44271:1:exon
so has part: feature:44812-44931:1:exon
so has part: feature:45535-45646:1:exon
so has part: feature:46451-46632:1:exon
so has part: feature:47417-47525:1:exon
so has part: feature:47920-48010:1:exon
so has part: feature:48691-48769:1:exon
so has part: feature:49937-50571:1:exon

position:41696:1
position: 41696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50571:1
position: 50571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41696-44271:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:44812-44931:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:45535-45646:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:46451-46632:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:47417-47525:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:47920-48010:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:48691-48769:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:49937-50571:1:exon

position:49937:1
position: 49937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

C1QTNF12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: C1QTNF12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: adipolin isoform X1
translation: MLVGFWWLLLVLLWPQLCPRLCPCAVAAARRDRKGQKELPELPDTSLGNSEERPQLPEPAEPRITDPRRTWISFVHRPDDGSGSKRRCKGRDKKLRGLVGPPGPPGPQGPPGAPGAEVTKEILLQEFKEILKETIEHRASLALPAQPSPLPLLPLALAEAGSQRRLLEAFHCKLKGHVLVDKKTLVELQNFQLPVARGAFLRGSGLNVATGRFTAPVGGIYQFSANVHLEHSELRGRAALRARDSVRVLVCIESLCHRHASLEVIAGLESNSKTFTICVQGLLQLQLLAQCSHQDTSPGFPGFPGWNSELFSPVWNADTHGRYSHSSAPSRCSQPRGVRLTQAKSQKIPSQIPNPRGMCHPWEWILELFPKGSWSFFLWDHGTFSQWIMDPSPNGSWSLFPMDHGVFSYGIMEISPNGSRSLFPMDPSPISQWIPALFPNGSQPHFPVDQFPPSQWIPAPFPSGSQPHFPVDPSPLSQRIPAPFPSGSQPPFPVDPSPLSQWIPAPFPIARELRSLLGWLWAQQFRGSQPQGDQAEPLLPLPVPWECRTPPGM
SIO_010081: C1QTNF12
subclass of: SO_0000673
so part of: C1QTNF12
location: join(44107..44271,44812..44931,45535..45646,46451..46632,47417..47525,47920..48010,48691..48769,54488..55291)
location: region:44107-55291:1
so has part: feature:44107-44271:1:exon
so has part: feature:44812-44931:1:exon
so has part: feature:45535-45646:1:exon
so has part: feature:46451-46632:1:exon
so has part: feature:47417-47525:1:exon
so has part: feature:47920-48010:1:exon
so has part: feature:48691-48769:1:exon
so has part: feature:54488-55291:1:exon

XP_041576410.1
type: Protein
SIO_000068: ncbiprotein

position:44107:1
position: 44107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55291:1
position: 55291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44107-44271:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:44812-44931:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:45535-45646:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:46451-46632:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:47417-47525:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:47920-48010:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:48691-48769:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:54488-55291:1:exon

C1QTNF12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: C1QTNF12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: adipolin isoform X2
translation: MLVGFWWLLLVLLWPQLCPRLCPCAVAAARRDRKGQKELPELPDTSLGNSEERPQLPEPAEPRITDPRRTWISFVHRPDDGSGSKRRCKGRDKKLRGLVGPPGPPGPQGPPGAPGAEVTKEILLQEFKEILKETIEHRASLALPAQPSPLPLLPLALAEAGSQRRLLEAFHCKLKGHVLVDKKTLVELQNFQLPVARGAFLRGSGLNVATGRFTAPVGGIYQFSANVHLEHSELRGRAALRARDSVRVLVCIESLCHRHASLEVIAGLESNSKTFTICVQGLLQLQAGQYASVFVDNGAGAAVTIQSGSDFMGMLLGA
SIO_010081: C1QTNF12
subclass of: SO_0000673
so part of: C1QTNF12
location: join(44107..44271,44812..44931,45535..45646,46451..46632,47417..47525,47920..48010,48691..48769,49937..50035)
location: region:44107-50035:1
so has part: feature:44107-44271:1:exon
so has part: feature:44812-44931:1:exon
so has part: feature:45535-45646:1:exon
so has part: feature:46451-46632:1:exon
so has part: feature:47417-47525:1:exon
so has part: feature:47920-48010:1:exon
so has part: feature:48691-48769:1:exon
so has part: feature:49937-50035:1:exon

XP_030145421.1
type: Protein
SIO_000068: ncbiprotein

position:50035:1
position: 50035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44107-44271:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:44812-44931:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:45535-45646:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:46451-46632:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:47417-47525:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:47920-48010:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:48691-48769:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:49937-50035:1:exon

LOC121471003
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121471003
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(46394..63982)
location: region:46394-63982:-1
so has part: feature:46394-63982:-1:exon
subclass of: SO_0000011

121471003
type: Gene
SIO_000068: ncbigene

position:46394:-1
position: 46394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:63982:-1
position: 63982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46394-63982:-1:exon

LOC121471003
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC121471003
product: uncharacterized LOC121471003
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 64 samples with support for all annotated introns
transcript id: XR_005982370.1
SIO_010081: LOC121471003
subclass of: SO_0000673
so part of: LOC121471003
location: complement(join(46394..46699,63569..63982))
location: region:46394-63982:-1
so has part: feature:63569-63982:-1:exon
so has part: feature:46394-46699:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:63569-63982:-1:exon

position:63569:-1
position: 63569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:46394-46699:-1:exon

position:46699:-1
position: 46699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

B3GALT6
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: B3GALT6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(60237..63571)
location: region:60237-63571:-1
so has part: feature:60237-63571:-1:exon
subclass of: SO_0000010

100225099
type: Gene
SIO_000068: ncbigene

position:60237:-1
position: 60237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:63571:-1
position: 63571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60237-63571:-1:exon

B3GALT6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: B3GALT6
product: beta-1,3-galactosyltransferase 6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_002190272.5
SIO_010081: B3GALT6
subclass of: SO_0000673
so part of: B3GALT6
location: complement(60237..63571)
location: region:60237-63571:-1
so has part: feature:60237-63571:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:60237-63571:-1:exon

B3GALT6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: B3GALT6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-1,3-galactosyltransferase 6
translation: MRALRRLSRHRTALGLGGLSLCAAVLLYLAKCTSEGLRPPPAHPQPGRAARGAEGGSAVLAAVVMSDPKSSERRSIIRSTWMAAAPPGRVWSRFVVGTAGLGAEELRSLQLEQRRHRDLLLLPELRDSYENLTAKVLATYVWLDAHLDFQFALKADDDTFVRLDVLLEELSAKEPRRLYWGFFSGRGRVKSGGKWKESAWLLCDYYLPYALGGGYVISADLVRYLSLSRDYLNLWQSEDVSLGVWLAPIDVKRVHDPRFDTEYKSRGCSNKYIVTHKQSIEDMLEKQQTLAREGKLCKEEVKLRLSYMYDWGVPPSQCCQRKDGIP
SIO_010081: B3GALT6
subclass of: SO_0000673
so part of: B3GALT6
location: complement(62499..63479)
location: region:62499-63479:-1
so has part: feature:62499-63479:-1:exon

XP_002190308.3
type: Protein
SIO_000068: ncbiprotein

position:62499:-1
position: 62499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:63479:-1
position: 63479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62499-63479:-1:exon

SDF4
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: SDF4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 64161..73337
location: region:64161-73337:1
so has part: feature:64161-73337:1:exon
subclass of: SO_0000010

100227991
type: Gene
SIO_000068: ncbigene

position:64161:1
position: 64161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:73337:1
position: 73337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64161-73337:1:exon

SDF4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: SDF4
product: stromal cell derived factor 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 3 long SRA reads, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 151 samples with support for all annotated introns
transcript id: XM_002190230.6
SIO_010081: SDF4
subclass of: SO_0000673
so part of: SDF4
location: join(64161..64304,65273..65611,67500..67636,67957..68070,69826..69984,71077..71252,72021..73337)
location: region:64161-73337:1
so has part: feature:64161-64304:1:exon
so has part: feature:65273-65611:1:exon
so has part: feature:67500-67636:1:exon
so has part: feature:67957-68070:1:exon
so has part: feature:69826-69984:1:exon
so has part: feature:71077-71252:1:exon
so has part: feature:72021-73337:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:64161-64304:1:exon

position:64304:1
position: 64304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:65273-65611:1:exon

position:65273:1
position: 65273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:65611:1
position: 65611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:67500-67636:1:exon

position:67500:1
position: 67500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:67636:1
position: 67636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:67957-68070:1:exon

position:67957:1
position: 67957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:68070:1
position: 68070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:69826-69984:1:exon

position:69826:1
position: 69826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:69984:1
position: 69984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:71077-71252:1:exon

position:71077:1
position: 71077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:71252:1
position: 71252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:72021-73337:1:exon

position:72021:1
position: 72021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SDF4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: SDF4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 45 kDa calcium-binding protein
translation: MQSGRAVLCSLGWLSLSLLSLLFPAGCARPANLSALRGREELLPPEHLNGVRLERDGHLNRELPQELFLGRERERFEEDSQPRRNRRKLVGIFSKVDRNNDQKISAKEMQRWIMEKTEEHFQEAVQENKMHFRAVDPDGDGHVSWDEYKIKFLASKGFNEKEIAEKIKNNEELKIDEETQEVLDNLKDRWYQADNPPPDLLLSEQEFLSFLHPEHSRGMLHFMVQEIVRDLDQDGDKRLTLPEFISLPVGTVENQQAQDVDDDWVRDRRKEFQEVIDANRDGIVTMEELEEYMDPMNEHNALNEARQMIAVADENQDHQLELEEILKYSEYFTGSKLMDYARNVHEEF
SIO_010081: SDF4
subclass of: SO_0000673
so part of: SDF4
location: join(65328..65611,67500..67636,67957..68070,69826..69984,71077..71252,72021..72197)
location: region:65328-72197:1
so has part: feature:65328-65611:1:exon
so has part: feature:67500-67636:1:exon
so has part: feature:67957-68070:1:exon
so has part: feature:69826-69984:1:exon
so has part: feature:71077-71252:1:exon
so has part: feature:72021-72197:1:exon

XP_002190266.3
type: Protein
SIO_000068: ncbiprotein

position:65328:1
position: 65328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:72197:1
position: 72197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65328-65611:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:67500-67636:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:67957-68070:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:69826-69984:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:71077-71252:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:72021-72197:1:exon

TNFRSF4
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: TNFRSF4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 73627..79645
location: region:73627-79645:1
so has part: feature:73627-79645:1:exon
subclass of: SO_0000010

115498056
type: Gene
SIO_000068: ncbigene

position:73627:1
position: 73627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:79645:1
position: 79645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:73627-79645:1:exon

TNFRSF4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: TNFRSF4
product: TNF receptor superfamily member 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_030289557.3
SIO_010081: TNFRSF4
subclass of: SO_0000673
so part of: TNFRSF4
location: join(73627..74407,75422..75544,76314..76424,77021..77087,77582..77904,78270..78395,79055..79645)
location: region:73627-79645:1
so has part: feature:73627-74407:1:exon
so has part: feature:75422-75544:1:exon
so has part: feature:76314-76424:1:exon
so has part: feature:77021-77087:1:exon
so has part: feature:77582-77904:1:exon
so has part: feature:78270-78395:1:exon
so has part: feature:79055-79645:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:73627-74407:1:exon

position:74407:1
position: 74407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:75422-75544:1:exon

position:75422:1
position: 75422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:75544:1
position: 75544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:76314-76424:1:exon

position:76314:1
position: 76314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:76424:1
position: 76424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:77021-77087:1:exon

position:77021:1
position: 77021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:77087:1
position: 77087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:77582-77904:1:exon

position:77582:1
position: 77582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:77904:1
position: 77904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:78270-78395:1:exon

position:78270:1
position: 78270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:78395:1
position: 78395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:79055-79645:1:exon

position:79055:1
position: 79055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TNFRSF4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: TNFRSF4
product: TNF receptor superfamily member 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_041720477.1
SIO_010081: TNFRSF4
subclass of: SO_0000673
so part of: TNFRSF4
location: join(73627..74407,75422..75544,76314..76424,77021..77087,77582..77904,78270..79048)
location: region:73627-79048:1
so has part: feature:73627-74407:1:exon
so has part: feature:75422-75544:1:exon
so has part: feature:76314-76424:1:exon
so has part: feature:77021-77087:1:exon
so has part: feature:77582-77904:1:exon
so has part: feature:78270-79048:1:exon

position:79048:1
position: 79048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:73627-74407:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:75422-75544:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:76314-76424:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:77021-77087:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:77582-77904:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:78270-79048:1:exon

TNFRSF4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: TNFRSF4
product: TNF receptor superfamily member 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_041720478.1
SIO_010081: TNFRSF4
subclass of: SO_0000673
so part of: TNFRSF4
location: join(73627..74407,76314..76424,77021..77087,77582..77904,78270..79048)
location: region:73627-79048:1
so has part: feature:73627-74407:1:exon
so has part: feature:76314-76424:1:exon
so has part: feature:77021-77087:1:exon
so has part: feature:77582-77904:1:exon
so has part: feature:78270-79048:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:73627-74407:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:76314-76424:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:77021-77087:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:77582-77904:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:78270-79048:1:exon

TNFRSF4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: TNFRSF4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tumor necrosis factor receptor superfamily member 4 isoform X2
translation: MALPRIAWNLPAFCWLLAVPIPASLGWECPERQYRFHERCCSDCAPGERMRSRCTASADTVCSPCQDGYFSSQHHHGLCHSCTVCNAWKGSVEVKPCEKTSDRICACRAGFQPDRGTPGIPLGKECSRCPAGTFSRGKNENCQPWTNCSTLGKSTLQAGTGTEDAQCGTEIPGNRAPFPTEIPGNRAPFPTEIPGNRAPFPTDFPGKRASSATEFPENRDPFPTEFPENSSRASSPREIPAVCRDPSVPTEPGWGSLSLLLLCLLLLLVSGISILLLIVQAARKKSRNGPVRSGQHKGNSCRIPIQEEQIDSNSSLIKN
SIO_010081: TNFRSF4
subclass of: SO_0000673
so part of: TNFRSF4
location: join(74269..74407,75422..75544,76314..76424,77021..77087,77582..77904,78270..78395,79055..79125)
location: region:74269-79125:1
so has part: feature:74269-74407:1:exon
so has part: feature:75422-75544:1:exon
so has part: feature:76314-76424:1:exon
so has part: feature:77021-77087:1:exon
so has part: feature:77582-77904:1:exon
so has part: feature:78270-78395:1:exon
so has part: feature:79055-79125:1:exon

XP_030145417.1
type: Protein
SIO_000068: ncbiprotein

position:74269:1
position: 74269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:79125:1
position: 79125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74269-74407:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:75422-75544:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:76314-76424:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:77021-77087:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:77582-77904:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:78270-78395:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:79055-79125:1:exon

TNFRSF4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: TNFRSF4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tumor necrosis factor receptor superfamily member 4 isoform X1
translation: MALPRIAWNLPAFCWLLAVPIPASLGWECPERQYRFHERCCSDCAPGERMRSRCTASADTVCSPCQDGYFSSQHHHGLCHSCTVCNAWKGSVEVKPCEKTSDRICACRAGFQPDRGTPGIPLGKECSRCPAGTFSRGKNENCQPWTNCSTLGKSTLQAGTGTEDAQCGTEIPGNRAPFPTEIPGNRAPFPTEIPGNRAPFPTDFPGKRASSATEFPENRDPFPTEFPENSSRASSPREIPAVCRDPSVPTEPGWGSLSLLLLCLLLLLVSGISILLLIVQAARKKSRNGPVRSGQHSEFLFLGSKSGKNNPESPFSGIKILENLIQ
SIO_010081: TNFRSF4
subclass of: SO_0000673
so part of: TNFRSF4
location: join(74269..74407,75422..75544,76314..76424,77021..77087,77582..77904,78270..78487)
location: region:74269-78487:1
so has part: feature:74269-74407:1:exon
so has part: feature:75422-75544:1:exon
so has part: feature:76314-76424:1:exon
so has part: feature:77021-77087:1:exon
so has part: feature:77582-77904:1:exon
so has part: feature:78270-78487:1:exon

XP_041576411.1
type: Protein
SIO_000068: ncbiprotein

position:78487:1
position: 78487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74269-74407:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:75422-75544:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:76314-76424:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:77021-77087:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:77582-77904:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:78270-78487:1:exon

TNFRSF4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: TNFRSF4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tumor necrosis factor receptor superfamily member 4 isoform X3
translation: MALPRIAWNLPAFCWLLAVPIPASLGWECPERQYRFHERCCSDCAPGKGSVEVKPCEKTSDRICACRAGFQPDRGTPGIPLGKECSRCPAGTFSRGKNENCQPWTNCSTLGKSTLQAGTGTEDAQCGTEIPGNRAPFPTEIPGNRAPFPTEIPGNRAPFPTDFPGKRASSATEFPENRDPFPTEFPENSSRASSPREIPAVCRDPSVPTEPGWGSLSLLLLCLLLLLVSGISILLLIVQAARKKSRNGPVRSGQHSEFLFLGSKSGKNNPESPFSGIKILENLIQ
SIO_010081: TNFRSF4
subclass of: SO_0000673
so part of: TNFRSF4
location: join(74269..74407,76314..76424,77021..77087,77582..77904,78270..78487)
location: region:74269-78487:1
so has part: feature:74269-74407:1:exon
so has part: feature:76314-76424:1:exon
so has part: feature:77021-77087:1:exon
so has part: feature:77582-77904:1:exon
so has part: feature:78270-78487:1:exon

XP_041576412.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:74269-74407:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:76314-76424:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:77021-77087:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:77582-77904:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:78270-78487:1:exon

TNFRSF18
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: TNFRSF18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 81726..90156
location: region:81726-90156:1
so has part: feature:81726-90156:1:exon
subclass of: SO_0000010

115498058
type: Gene
SIO_000068: ncbigene

position:81726:1
position: 81726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:90156:1
position: 90156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81726-90156:1:exon

TNFRSF18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: TNFRSF18
product: TNF receptor superfamily member 18, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_032752189.2
SIO_010081: TNFRSF18
subclass of: SO_0000673
so part of: TNFRSF18
location: join(81726..82341,83409..83566,83713..83800,84365..84453,85177..85317,85935..90156)
location: region:81726-90156:1
so has part: feature:81726-82341:1:exon
so has part: feature:83409-83566:1:exon
so has part: feature:83713-83800:1:exon
so has part: feature:84365-84453:1:exon
so has part: feature:85177-85317:1:exon
so has part: feature:85935-90156:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:81726-82341:1:exon

position:82341:1
position: 82341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:83409-83566:1:exon

position:83409:1
position: 83409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:83566:1
position: 83566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:83713-83800:1:exon

position:83713:1
position: 83713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:83800:1
position: 83800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:84365-84453:1:exon

position:84365:1
position: 84365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:84453:1
position: 84453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:85177-85317:1:exon

position:85177:1
position: 85177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:85317:1
position: 85317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:85935-90156:1:exon

position:85935:1
position: 85935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TNFRSF18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: TNFRSF18
product: TNF receptor superfamily member 18, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_030289563.3
SIO_010081: TNFRSF18
subclass of: SO_0000673
so part of: TNFRSF18
location: join(81726..82341,83432..83566,83713..83800,84365..84453,85177..85317,85935..90156)
location: region:81726-90156:1
so has part: feature:81726-82341:1:exon
so has part: feature:83432-83566:1:exon
so has part: feature:83713-83800:1:exon
so has part: feature:84365-84453:1:exon
so has part: feature:85177-85317:1:exon
so has part: feature:85935-90156:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:81726-82341:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:83432-83566:1:exon

position:83432:1
position: 83432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:83713-83800:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:84365-84453:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:85177-85317:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:85935-90156:1:exon

TNFRSF18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: TNFRSF18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tumor necrosis factor receptor superfamily member 18 isoform X1
translation: MSRPWLLALLALLAGHWAPPGAAGSCQDRELRPVWGGGTKCCPRCTWKGRNPAPCVAAQDHDCKCPPGHSCADEPCQFCRALPHCPPGREPARIGSVNFQFECKPCENGTYSSSRGSWCRNWTDCESSGLVTLRVGNSSHDSECSVPGTAPQPAGPGPEPRSSPVLAALVAAAVFALLLLTLLLHFCIWNLHGSGKRPPADADPGPTFQRPQVEESYSIQFPEEEHGDKSQEKLSILSLKIYSELR
SIO_010081: TNFRSF18
subclass of: SO_0000673
so part of: TNFRSF18
location: join(82194..82341,83432..83566,83713..83800,84365..84453,85177..85317,85935..86074)
location: region:82194-86074:1
so has part: feature:82194-82341:1:exon
so has part: feature:83432-83566:1:exon
so has part: feature:83713-83800:1:exon
so has part: feature:84365-84453:1:exon
so has part: feature:85177-85317:1:exon
so has part: feature:85935-86074:1:exon

XP_030145423.3
type: Protein
SIO_000068: ncbiprotein

position:82194:1
position: 82194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:86074:1
position: 86074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:82194-82341:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:83432-83566:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:83713-83800:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:84365-84453:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:85177-85317:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:85935-86074:1:exon

TNFRSF18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: TNFRSF18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tumor necrosis factor receptor superfamily member 18 isoform X2
translation: MHLEGTNPSGIPTGNPAPCVAAQDHDCKCPPGHSCADEPCQFCRALPHCPPGREPARIGSVNFQFECKPCENGTYSSSRGSWCRNWTDCESSGLVTLRVGNSSHDSECSVPGTAPQPAGPGPEPRSSPVLAALVAAAVFALLLLTLLLHFCIWNLHGSGKRPPADADPGPTFQRPQVEESYSIQFPEEEHGDKSQEKLSILSLKIYSELR
SIO_010081: TNFRSF18
subclass of: SO_0000673
so part of: TNFRSF18
location: join(82325..82341,83409..83566,83713..83800,84365..84453,85177..85317,85935..86074)
location: region:82325-86074:1
so has part: feature:82325-82341:1:exon
so has part: feature:83409-83566:1:exon
so has part: feature:83713-83800:1:exon
so has part: feature:84365-84453:1:exon
so has part: feature:85177-85317:1:exon
so has part: feature:85935-86074:1:exon

XP_032608080.2
type: Protein
SIO_000068: ncbiprotein

position:82325:1
position: 82325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:82325-82341:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:83409-83566:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:83713-83800:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:84365-84453:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:85177-85317:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:85935-86074:1:exon

MIR200A
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
alternative label: tgu-mir-200a
gene: MIR200A
gene synonym: tgu-mir-200a
note: microRNA mir-200a; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: complement(88585..88677)
location: region:88585-88677:-1
so has part: feature:88585-88677:-1:exon
subclass of: SO_0000571

100886743
type: Gene
SIO_000068: ncbigene

MI0013759
type: miRBase
SIO_000068: mirbase

position:88585:-1
position: 88585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:88677:-1
position: 88677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:88585-88677:-1:exon

MIR200A
type: Precursor RNA
subclass of: SO_0000185
RO_0002162: 59729
alternative label: tgu-mir-200a
gene: MIR200A
gene synonym: tgu-mir-200a
product: microRNA mir-200a
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NR_049067.1
SIO_010081: MIR200A
subclass of: SO_0000673
so part of: MIR200A
location: complement(88585..88677)
location: region:88585-88677:-1
so has part: feature:88585-88677:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:88585-88677:-1:exon

MIR200A
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
alternative label: tgu-mir-200a
nc RNA class: miRNA
gene: MIR200A
gene synonym: tgu-mir-200a
product: tgu-miR-200a-3p
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
SIO_010081: MIR200A
subclass of: SO_0000673
so part of: MIR200A
location: complement(88595..88617)
location: region:88595-88617:-1
so has part: feature:88595-88617:-1:exon

MIMAT0014545
type: miRBase
SIO_000068: mirbase

position:88595:-1
position: 88595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:88617:-1
position: 88617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:88595-88617:-1:exon

MIR200A
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
alternative label: tgu-mir-200a
nc RNA class: miRNA
gene: MIR200A
gene synonym: tgu-mir-200a
product: tgu-miR-200a-5p
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
SIO_010081: MIR200A
subclass of: SO_0000673
so part of: MIR200A
location: complement(88635..88655)
location: region:88635-88655:-1
so has part: feature:88635-88655:-1:exon

MIMAT0014640
type: miRBase
SIO_000068: mirbase

position:88635:-1
position: 88635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:88655:-1
position: 88655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:88635-88655:-1:exon

MIR200B
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
alternative label: tgu-mir-200b
gene: MIR200B
gene synonym: tgu-mir-200b
note: microRNA mir-200b; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: complement(90017..90089)
location: region:90017-90089:-1
so has part: feature:90017-90089:-1:exon
subclass of: SO_0000571

100886754
type: Gene
SIO_000068: ncbigene

MI0013820
type: miRBase
SIO_000068: mirbase

position:90017:-1
position: 90017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:90089:-1
position: 90089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90017-90089:-1:exon

MIR200B
type: Precursor RNA
subclass of: SO_0000185
RO_0002162: 59729
alternative label: tgu-mir-200b
gene: MIR200B
gene synonym: tgu-mir-200b
product: microRNA mir-200b
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NR_049128.1
SIO_010081: MIR200B
subclass of: SO_0000673
so part of: MIR200B
location: complement(90017..90089)
location: region:90017-90089:-1
so has part: feature:90017-90089:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:90017-90089:-1:exon

MIR200B
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
alternative label: tgu-mir-200b
nc RNA class: miRNA
gene: MIR200B
gene synonym: tgu-mir-200b
product: tgu-miR-200b-3p
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
SIO_010081: MIR200B
subclass of: SO_0000673
so part of: MIR200B
location: complement(90027..90049)
location: region:90027-90049:-1
so has part: feature:90027-90049:-1:exon

MIMAT0014592
type: miRBase
SIO_000068: mirbase

position:90027:-1
position: 90027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:90049:-1
position: 90049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90027-90049:-1:exon

MIR200B
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
alternative label: tgu-mir-200b
nc RNA class: miRNA
gene: MIR200B
gene synonym: tgu-mir-200b
product: tgu-miR-200b-5p
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
SIO_010081: MIR200B
subclass of: SO_0000673
so part of: MIR200B
location: complement(90065..90085)
location: region:90065-90085:-1
so has part: feature:90065-90085:-1:exon

MIMAT0014649
type: miRBase
SIO_000068: mirbase

position:90065:-1
position: 90065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:90085:-1
position: 90085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90065-90085:-1:exon

C21H1orf159
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: C21H1orf159
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(109068..118549)
location: region:109068-118549:-1
so has part: feature:109068-118549:-1:exon
subclass of: SO_0000010

100218353
type: Gene
SIO_000068: ncbigene

position:109068:-1
position: 109068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:118549:-1
position: 118549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:109068-118549:-1:exon

C21H1orf159
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: C21H1orf159
product: chromosome 21 C1orf159 homolog, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 52 samples with support for all annotated introns
transcript id: XM_030289272.3
SIO_010081: C21H1orf159
subclass of: SO_0000673
so part of: C21H1orf159
location: complement(join(109068..109216,112389..112419,112686..112711,113258..113392,113909..114004,114568..114637,115343..115433,117154..117238,118452..118549))
location: region:109068-118549:-1
so has part: feature:118452-118549:-1:exon
so has part: feature:117154-117238:-1:exon
so has part: feature:115343-115433:-1:exon
so has part: feature:114568-114637:-1:exon
so has part: feature:113909-114004:-1:exon
so has part: feature:113258-113392:-1:exon
so has part: feature:112686-112711:-1:exon
so has part: feature:112389-112419:-1:exon
so has part: feature:109068-109216:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:118452-118549:-1:exon

position:118452:-1
position: 118452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:117154-117238:-1:exon

position:117154:-1
position: 117154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:117238:-1
position: 117238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:115343-115433:-1:exon

position:115343:-1
position: 115343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:115433:-1
position: 115433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:114568-114637:-1:exon

position:114568:-1
position: 114568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:114637:-1
position: 114637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:113909-114004:-1:exon

position:113909:-1
position: 113909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:114004:-1
position: 114004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:113258-113392:-1:exon

position:113258:-1
position: 113258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:113392:-1
position: 113392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:112686-112711:-1:exon

position:112686:-1
position: 112686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:112711:-1
position: 112711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:112389-112419:-1:exon

position:112389:-1
position: 112389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:112419:-1
position: 112419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:109068-109216:-1:exon

position:109216:-1
position: 109216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

C21H1orf159
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: C21H1orf159
product: chromosome 21 C1orf159 homolog, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 2 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 51 samples with support for all annotated introns
transcript id: XM_030289271.3
SIO_010081: C21H1orf159
subclass of: SO_0000673
so part of: C21H1orf159
location: complement(join(109068..109216,112389..112419,112686..112711,113258..113392,113909..114004,114568..114637,115343..115433,117154..117238,118440..118543))
location: region:109068-118543:-1
so has part: feature:118440-118543:-1:exon
so has part: feature:117154-117238:-1:exon
so has part: feature:115343-115433:-1:exon
so has part: feature:114568-114637:-1:exon
so has part: feature:113909-114004:-1:exon
so has part: feature:113258-113392:-1:exon
so has part: feature:112686-112711:-1:exon
so has part: feature:112389-112419:-1:exon
so has part: feature:109068-109216:-1:exon

position:118543:-1
position: 118543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:118440-118543:-1:exon

position:118440:-1
position: 118440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:117154-117238:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:115343-115433:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:114568-114637:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:113909-114004:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:113258-113392:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:112686-112711:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:112389-112419:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:109068-109216:-1:exon

C21H1orf159
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: C21H1orf159
product: chromosome 21 C1orf159 homolog, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 long SRA reads, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 63 samples with support for all annotated introns
transcript id: XM_030289273.3
SIO_010081: C21H1orf159
subclass of: SO_0000673
so part of: C21H1orf159
location: complement(join(109068..111751,112389..112419,112686..112711,113258..113392,113909..114004,114568..114637,115343..115433,117154..117238,118440..118542))
location: region:109068-118542:-1
so has part: feature:118440-118542:-1:exon
so has part: feature:117154-117238:-1:exon
so has part: feature:115343-115433:-1:exon
so has part: feature:114568-114637:-1:exon
so has part: feature:113909-114004:-1:exon
so has part: feature:113258-113392:-1:exon
so has part: feature:112686-112711:-1:exon
so has part: feature:112389-112419:-1:exon
so has part: feature:109068-111751:-1:exon

position:118542:-1
position: 118542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:118440-118542:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:117154-117238:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:115343-115433:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:114568-114637:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:113909-114004:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:113258-113392:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:112686-112711:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:112389-112419:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:109068-111751:-1:exon

position:111751:-1
position: 111751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

C21H1orf159
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: C21H1orf159
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C1orf159 homolog isoform X1
translation: MEVPFVLLLSRLVAEVAGKSPENSVPGAPECCEGRSDPNGSCPHCSPGCYRRWNEDGSGGGCVRCRNQSLGQPLGDCGSGGPEVAASLILGTFFLSLFLILSVASFFYLKRANKLPKVFYRRNKASVLQPSETASMIPPPASSGFLLPFHRPVPSPKLWAQPSKTQF
SIO_010081: C21H1orf159
subclass of: SO_0000673
so part of: C21H1orf159
location: complement(join(109143..109216,112389..112419,112686..112711,113258..113392,113909..114004,114568..114637,115343..115414))
location: region:109143-115414:-1
so has part: feature:115343-115414:-1:exon
so has part: feature:114568-114637:-1:exon
so has part: feature:113909-114004:-1:exon
so has part: feature:113258-113392:-1:exon
so has part: feature:112686-112711:-1:exon
so has part: feature:112389-112419:-1:exon
so has part: feature:109143-109216:-1:exon

XP_030145131.3
type: Protein
SIO_000068: ncbiprotein

position:109143:-1
position: 109143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:115414:-1
position: 115414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:115343-115414:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:114568-114637:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:113909-114004:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:113258-113392:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:112686-112711:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:112389-112419:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:109143-109216:-1:exon

C21H1orf159
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: C21H1orf159
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C1orf159 homolog isoform X1
translation: MEVPFVLLLSRLVAEVAGKSPENSVPGAPECCEGRSDPNGSCPHCSPGCYRRWNEDGSGGGCVRCRNQSLGQPLGDCGSGGPEVAASLILGTFFLSLFLILSVASFFYLKRANKLPKVFYRRNKASVLQPSETASMIPPPASSGFLLPFHRPVPSPKLWAQPSKTQF
SIO_010081: C21H1orf159
subclass of: SO_0000673
so part of: C21H1orf159
location: complement(join(109143..109216,112389..112419,112686..112711,113258..113392,113909..114004,114568..114637,115343..115414))
location: region:109143-115414:-1
so has part: feature:115343-115414:-1:exon
so has part: feature:114568-114637:-1:exon
so has part: feature:113909-114004:-1:exon
so has part: feature:113258-113392:-1:exon
so has part: feature:112686-112711:-1:exon
so has part: feature:112389-112419:-1:exon
so has part: feature:109143-109216:-1:exon

XP_030145132.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:115343-115414:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:114568-114637:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:113909-114004:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:113258-113392:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:112686-112711:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:112389-112419:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:109143-109216:-1:exon

C21H1orf159
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: C21H1orf159
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C1orf159 homolog isoform X2
translation: MEVPFVLLLSRLVAEVAGKSPENSVPGAPECCEGRSDPNGSCPHCSPGCYRRWNEDGSGGGCVRCRNQSLGQPLGDCGSGGPEVAASLILGTFFLSLFLILSVASFFYLKRANKLPKVFYRRNKASVLQPSETASMIPPPASSVRKPRYVRRERSLGPAESRVSNV
SIO_010081: C21H1orf159
subclass of: SO_0000673
so part of: C21H1orf159
location: complement(join(111681..111751,112389..112419,112686..112711,113258..113392,113909..114004,114568..114637,115343..115414))
location: region:111681-115414:-1
so has part: feature:115343-115414:-1:exon
so has part: feature:114568-114637:-1:exon
so has part: feature:113909-114004:-1:exon
so has part: feature:113258-113392:-1:exon
so has part: feature:112686-112711:-1:exon
so has part: feature:112389-112419:-1:exon
so has part: feature:111681-111751:-1:exon

XP_030145133.3
type: Protein
SIO_000068: ncbiprotein

position:111681:-1
position: 111681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:115343-115414:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:114568-114637:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:113909-114004:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:113258-113392:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:112686-112711:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:112389-112419:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:111681-111751:-1:exon

RNF223
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: RNF223
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 124252..126615
location: region:124252-126615:1
so has part: feature:124252-126615:1:exon
subclass of: SO_0000010

100231839
type: Gene
SIO_000068: ncbigene

position:124252:1
position: 124252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:126615:1
position: 126615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:124252-126615:1:exon

RNF223
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: RNF223
product: ring finger protein 223
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041720425.1
SIO_010081: RNF223
subclass of: SO_0000673
so part of: RNF223
location: 124252..126615
location: region:124252-126615:1
so has part: feature:124252-126615:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:124252-126615:1:exon

RNF223
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: RNF223
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: RING finger protein 223
translation: MSCFPQLRRSRPAEPPASPGDPPSSPAESPNRPGAASPVSLSPTSVSLSPTSLPLSPTSLPLSPTSLPPGKRGRSPLGSPLGSPKPASPVECSICFTSYDNSFKTPKLLQCSHVFCLECVARLSAALAAGQEALPCPFCRQPTCLPRQGAPGLATSRELLATLPPELQXERQLWMDGTRLCCRRASADAENPDSCDSIDVAMAKAESAEVXPGGLAGRLSRCDICDDWKRIVLLSALLIILFCIILWPVQCALKTGNLRCFARATGRPELLVPKATAARPHGHPSTRDRARWRLPS
SIO_010081: RNF223
subclass of: SO_0000673
so part of: RNF223
location: 124390..125277
location: region:124390-125277:1
so has part: feature:124390-125277:1:exon

XP_041576359.1
type: Protein
SIO_000068: ncbiprotein

position:124390:1
position: 124390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:125277:1
position: 125277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:124390-125277:1:exon

AGRN
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: AGRN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(127184..185116)
location: region:127184-185116:-1
so has part: feature:127184-185116:-1:exon
subclass of: SO_0000010

100219336
type: Gene
SIO_000068: ncbigene

position:127184:-1
position: 127184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:185116:-1
position: 185116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:127184-185116:-1:exon

AGRN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: AGRN
product: agrin, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 ESTs, 1 long SRA read, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_041720422.1
SIO_010081: AGRN
subclass of: SO_0000673
so part of: AGRN
location: complement(join(127184..128862,129799..129902,129999..130223,130689..130721,132163..132186,132513..132600,133156..133345,134108..134224,134972..134983,135734..135845,136296..136460,136907..137003,137165..137299,137597..137826,138075..138290,138773..138965,139642..140049,140826..140945,141570..141684,142139..142266,143205..143339,143682..144068,144298..144403,144610..144734,145259..145402,145737..145901,147493..147606,147899..148004,148201..148346,150655..150855,151581..151775,153782..154003,158678..158884,159451..159675,160000..160224,160591..160806,163567..163614,179084..179105,179272..179511,184725..185116))
location: region:127184-185116:-1
so has part: feature:184725-185116:-1:exon
so has part: feature:179272-179511:-1:exon
so has part: feature:179084-179105:-1:exon
so has part: feature:163567-163614:-1:exon
so has part: feature:160591-160806:-1:exon
so has part: feature:160000-160224:-1:exon
so has part: feature:159451-159675:-1:exon
so has part: feature:158678-158884:-1:exon
so has part: feature:153782-154003:-1:exon
so has part: feature:151581-151775:-1:exon
so has part: feature:150655-150855:-1:exon
so has part: feature:148201-148346:-1:exon
so has part: feature:147899-148004:-1:exon
so has part: feature:147493-147606:-1:exon
so has part: feature:145737-145901:-1:exon
so has part: feature:145259-145402:-1:exon
so has part: feature:144610-144734:-1:exon
so has part: feature:144298-144403:-1:exon
so has part: feature:143682-144068:-1:exon
so has part: feature:143205-143339:-1:exon
so has part: feature:142139-142266:-1:exon
so has part: feature:141570-141684:-1:exon
so has part: feature:140826-140945:-1:exon
so has part: feature:139642-140049:-1:exon
so has part: feature:138773-138965:-1:exon
so has part: feature:138075-138290:-1:exon
so has part: feature:137597-137826:-1:exon
so has part: feature:137165-137299:-1:exon
so has part: feature:136907-137003:-1:exon
so has part: feature:136296-136460:-1:exon
so has part: feature:135734-135845:-1:exon
so has part: feature:134972-134983:-1:exon
so has part: feature:134108-134224:-1:exon
so has part: feature:133156-133345:-1:exon
so has part: feature:132513-132600:-1:exon
so has part: feature:132163-132186:-1:exon
so has part: feature:130689-130721:-1:exon
so has part: feature:129999-130223:-1:exon
so has part: feature:129799-129902:-1:exon
so has part: feature:127184-128862:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:184725-185116:-1:exon

position:184725:-1
position: 184725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:179272-179511:-1:exon

position:179272:-1
position: 179272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:179511:-1
position: 179511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:179084-179105:-1:exon

position:179084:-1
position: 179084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:179105:-1
position: 179105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:163567-163614:-1:exon

position:163567:-1
position: 163567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:163614:-1
position: 163614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:160591-160806:-1:exon

position:160591:-1
position: 160591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:160806:-1
position: 160806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:160000-160224:-1:exon

position:160000:-1
position: 160000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:160224:-1
position: 160224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:159451-159675:-1:exon

position:159451:-1
position: 159451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:159675:-1
position: 159675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:158678-158884:-1:exon

position:158678:-1
position: 158678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:158884:-1
position: 158884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:153782-154003:-1:exon

position:153782:-1
position: 153782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:154003:-1
position: 154003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:151581-151775:-1:exon

position:151581:-1
position: 151581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:151775:-1
position: 151775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:150655-150855:-1:exon

position:150655:-1
position: 150655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:150855:-1
position: 150855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:148201-148346:-1:exon

position:148201:-1
position: 148201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:148346:-1
position: 148346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:147899-148004:-1:exon

position:147899:-1
position: 147899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:148004:-1
position: 148004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:147493-147606:-1:exon

position:147493:-1
position: 147493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:147606:-1
position: 147606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:145737-145901:-1:exon

position:145737:-1
position: 145737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:145901:-1
position: 145901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:145259-145402:-1:exon

position:145259:-1
position: 145259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:145402:-1
position: 145402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:144610-144734:-1:exon

position:144610:-1
position: 144610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:144734:-1
position: 144734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:144298-144403:-1:exon

position:144298:-1
position: 144298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:144403:-1
position: 144403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:143682-144068:-1:exon

position:143682:-1
position: 143682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:144068:-1
position: 144068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:143205-143339:-1:exon

position:143205:-1
position: 143205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:143339:-1
position: 143339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:142139-142266:-1:exon

position:142139:-1
position: 142139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:142266:-1
position: 142266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:141570-141684:-1:exon

position:141570:-1
position: 141570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:141684:-1
position: 141684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:140826-140945:-1:exon

position:140826:-1
position: 140826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:140945:-1
position: 140945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:139642-140049:-1:exon

position:139642:-1
position: 139642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:140049:-1
position: 140049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:138773-138965:-1:exon

position:138773:-1
position: 138773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:138965:-1
position: 138965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:138075-138290:-1:exon

position:138075:-1
position: 138075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:138290:-1
position: 138290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:137597-137826:-1:exon

position:137597:-1
position: 137597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:137826:-1
position: 137826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:137165-137299:-1:exon

position:137165:-1
position: 137165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:137299:-1
position: 137299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:136907-137003:-1:exon

position:136907:-1
position: 136907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:137003:-1
position: 137003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:136296-136460:-1:exon

position:136296:-1
position: 136296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:136460:-1
position: 136460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
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AGRN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: AGRN
product: agrin, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 ESTs, 1 long SRA read, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041720420.1
SIO_010081: AGRN
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AGRN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: AGRN
product: agrin, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 ESTs, 1 long SRA read, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_041720421.1
SIO_010081: AGRN
subclass of: SO_0000673
so part of: AGRN
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AGRN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: AGRN
product: agrin, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 ESTs, 1 long SRA read, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_041720423.1
SIO_010081: AGRN
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AGRN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: AGRN
product: agrin, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 ESTs, 1 long SRA read, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_041720419.1
SIO_010081: AGRN
subclass of: SO_0000673
so part of: AGRN
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location: region:127184-185116:-1
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AGRN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: AGRN
product: agrin, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 ESTs, 1 long SRA read, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
transcript id: XM_041720424.1
SIO_010081: AGRN
subclass of: SO_0000673
so part of: AGRN
location: complement(join(127184..128862,129799..129902,129999..130223,132513..132600,133156..133345,134108..134224,134972..134983,135734..135845,136296..136460,136907..137003,137165..137299,137597..137826,138075..138290,138773..138965,139642..140049,140826..140945,141570..141684,142139..142266,143205..143339,143682..144068,144298..144403,144610..144734,145259..145402,145737..145901,147493..147606,147899..148004,148201..148346,150655..150855,151581..151775,153782..154003,158678..158884,159451..159675,160000..160224,160591..160806,163567..163614,169891..169911,179250..179511,184725..185115))
location: region:127184-185115:-1
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position:185115:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

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AGRN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: AGRN
product: agrin, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 ESTs, 1 long SRA read, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_030289462.3
SIO_010081: AGRN
subclass of: SO_0000673
so part of: AGRN
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position:166263:-1
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SIO_000628: feature:136296-136460:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:135734-135845:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:134972-134983:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:134108-134224:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:133156-133345:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:132513-132600:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:132163-132186:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:130689-130721:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:129999-130223:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:129799-129902:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:127184-128862:-1:exon

AGRN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: AGRN
product: agrin, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 ESTs, 1 long SRA read, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 59 samples with support for all annotated introns
transcript id: XM_030289463.3
SIO_010081: AGRN
subclass of: SO_0000673
so part of: AGRN
location: complement(join(127184..128862,129799..129902,129999..130223,132513..132600,133156..133345,134108..134224,134972..134983,135734..135845,136296..136460,136907..137003,137165..137299,137597..137826,138075..138290,138773..138965,139642..140049,140826..140945,141570..141684,142139..142266,143205..143339,143682..144068,144298..144403,144610..144734,145259..145402,145737..145901,147493..147606,147899..148004,148201..148346,150655..150855,151581..151775,153782..154003,158678..158884,159451..159675,160000..160224,160591..160806,163567..163614,164900..166262))
location: region:127184-166262:-1
so has part: feature:164900-166262:-1:exon
so has part: feature:163567-163614:-1:exon
so has part: feature:160591-160806:-1:exon
so has part: feature:160000-160224:-1:exon
so has part: feature:159451-159675:-1:exon
so has part: feature:158678-158884:-1:exon
so has part: feature:153782-154003:-1:exon
so has part: feature:151581-151775:-1:exon
so has part: feature:150655-150855:-1:exon
so has part: feature:148201-148346:-1:exon
so has part: feature:147899-148004:-1:exon
so has part: feature:147493-147606:-1:exon
so has part: feature:145737-145901:-1:exon
so has part: feature:145259-145402:-1:exon
so has part: feature:144610-144734:-1:exon
so has part: feature:144298-144403:-1:exon
so has part: feature:143682-144068:-1:exon
so has part: feature:143205-143339:-1:exon
so has part: feature:142139-142266:-1:exon
so has part: feature:141570-141684:-1:exon
so has part: feature:140826-140945:-1:exon
so has part: feature:139642-140049:-1:exon
so has part: feature:138773-138965:-1:exon
so has part: feature:138075-138290:-1:exon
so has part: feature:137597-137826:-1:exon
so has part: feature:137165-137299:-1:exon
so has part: feature:136907-137003:-1:exon
so has part: feature:136296-136460:-1:exon
so has part: feature:135734-135845:-1:exon
so has part: feature:134972-134983:-1:exon
so has part: feature:134108-134224:-1:exon
so has part: feature:133156-133345:-1:exon
so has part: feature:132513-132600:-1:exon
so has part: feature:129999-130223:-1:exon
so has part: feature:129799-129902:-1:exon
so has part: feature:127184-128862:-1:exon

position:166262:-1
position: 166262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:164900-166262:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:163567-163614:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:160591-160806:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:160000-160224:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:159451-159675:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:158678-158884:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:153782-154003:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:151581-151775:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:150655-150855:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:148201-148346:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:147899-148004:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:147493-147606:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:145737-145901:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:145259-145402:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:144610-144734:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:144298-144403:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:143682-144068:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:143205-143339:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:142139-142266:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:141570-141684:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:140826-140945:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:139642-140049:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:138773-138965:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:138075-138290:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:137597-137826:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:137165-137299:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:136907-137003:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:136296-136460:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:135734-135845:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:134972-134983:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:134108-134224:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:133156-133345:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:132513-132600:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:129999-130223:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:129799-129902:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:127184-128862:-1:exon

AGRN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: AGRN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: agrin isoform X4
translation: MGARRAGTGRARLLLALGMALGMALLPPARAGCPERELQRREEEANVVLTGTVEEIMNVDPVHHTYSCKVRVWRYLKGKDIVTHEILLDGGNKVVIGGFGDPLICDNQVATGDTRIFFVNPAPQALWPAHRNELMLNSSLMRITLRNLEEVEHCVEDKPNSYFTQTPPPPRDGCRGMLCGFGAVCERSPTEPGQASCVCRKGPCAPVVAPVCGSDHSTYSNECELDRAQCNQQRRIKVVSKGPCGSKDPCAEVTCSFGSSCVPSPDGQAAKCVCPSSCGGVAESPVCGSDGRDYRSLCHLQKHACDAQQDLAKQFDGPCDPCQGVPSEPGRVCRVNPRTRRAELLPRPEDCPPGSGPVCGDDGVTYESECAMGRAGAIRGIDIQKVRSGQCQQQDRCKEECRFNAVCLNRRGAARCSCERISCDGAFRPLCGGDGRTYGSDCQRRRAECLRQAGIAVRHRGPCDLGAPSPCLSVECSFGATCVVKNQAAVCECQQQCQGRYDPVCGTDQRTYGSPCELHAMACLLQRDIGLRHRGPCERCGKCRFGAICEAETGRCVCPTECVPSAQPVCGSDGNTYGSECELHVRACTQQENILVAAQGPCKPCGSSLCSFGGRCEGGQCLCPRCERQPPAPVCGSDGVTYPSPCQLQVASCQLQKSIQVARTGPCEDECGSGGSGSGDGGECEQERCRHFGGWWDEDAEDEPCVCDFTCAAAPRAPVCGSDGVTYANECQLKKTRCEKRQELFVTSQGACRALATTPPPLLAVHCSQSVYGCCPDNVTAALGVGAAGCPSSCQCNPHGSYGGSCEPGSGQCSCKPGVGGLRCDRCEPGFWNFRGIVTDGRSGCTPCGCDPVGSVRDDCEQMSGLCSCRPGISGMKCSRCPAGSSLGSAGCQPDPSTPRSCQELSCDFGASCVELNGRAHCECPSPLCPEGNATKVCGSDGVTYGDQCQLRTIACRQGQHITVKHVGQCHEPVTPSSPPVPPTPLPTLAPDRLLLPAPPRATPRAPVATGSPPPAQPTERGHPTTRHVTTTARPATTPWVTHGAHRATARPLATAPVPAATGQPGSSQPGSGESGSAEGSGDLDMGTSGDQEASGAGSAGEEEPDEAQVPPTAAIERATCYNSALGCCSDGRTAAADGDGSNCPATKVFQGVLILEEVEGQELFYTPEMADPKSELFGETARSIESALDELFRGSEVRRDFRSVRVRDLGQSSAVRVIVEAHFDPATSYTAADIQGALLKQLRAARRKTILVKKPQQEHIKFMDFDWLPRLVTTTVTTTTGTTAAPGSARRVPAATAALGQPVGSPGQPVGTAGTAGHPGHPVGTVGSPGEPVGTTGTARSPAGTAGSSRGAPPTALPPGTAPAPPPCASQPCRHGGTCRDDGHGFTCSCPAGTAGTTCEKSAVPFVPRFGGGSVLALRTLRAYHTLRVALEFRALEPAGLLLYNAQRHGKDFIALALRGGLVQLRFDTGSGTGTVTSRVPVEPGRWHRLLVTRNRRTGTLAVDGEPPVSGHSPPGTDGLNLDTELFIGGVPEEHRALAFERTGVAGGLRGCVRALSINNRGHELRPGAADVLYGSAVGECGTEPCQPNPCHHGGTCQPRDADAFQCQCPEAYAGPTCALERNPCEPSPCHGSATCQVLPGSGFLCACPLGRHGDLCQQESEQDPAVPFLPQFSGSSYLELPGLQSFVPGLPDRMSLDLVLLARRPRGLILYNGQRSDGGGDFVSLALHGGHLEFRFDLGKGPALLRSREPVPLDTWVSVRLERSGRKGVLRVNGGPAVTGESPKSRKVPHMVLNLKEPLYLGGAPDFSRLARAAAVSSGFEGALQKVLVDGVPVLREQNVRAARQVVPFRGHPCTQEPNPCQPGGTCQPSMAGYQCSCHAGFAGARCEKAIIEKAAGDTEAVAFDGRTYLEFHNAVTRSHLSNEIPAPEALDSPSEPSEKALQSNHFELSIKTEATQGLLLWSGKGLQRSDYIALAIVDGHVQLSYDLGSKGVTLRSS…
SIO_010081: AGRN
subclass of: SO_0000673
so part of: AGRN
location: complement(join(128705..128862,129799..129902,129999..130223,130689..130721,132163..132186,132513..132600,133156..133345,134108..134224,134972..134983,135734..135845,136296..136460,136907..137003,137165..137299,137597..137826,138075..138290,138773..138965,139642..140049,140826..140945,141570..141684,142139..142266,143205..143339,143682..144068,144298..144403,144610..144734,145259..145402,145737..145901,147493..147606,147899..148004,148201..148346,150655..150855,151581..151775,153782..154003,158678..158884,159451..159675,160000..160224,160591..160806,163567..163614,179084..179105,179272..179511,184725..184931))
location: region:128705-184931:-1
so has part: feature:184725-184931:-1:exon
so has part: feature:179272-179511:-1:exon
so has part: feature:179084-179105:-1:exon
so has part: feature:163567-163614:-1:exon
so has part: feature:160591-160806:-1:exon
so has part: feature:160000-160224:-1:exon
so has part: feature:159451-159675:-1:exon
so has part: feature:158678-158884:-1:exon
so has part: feature:153782-154003:-1:exon
so has part: feature:151581-151775:-1:exon
so has part: feature:150655-150855:-1:exon
so has part: feature:148201-148346:-1:exon
so has part: feature:147899-148004:-1:exon
so has part: feature:147493-147606:-1:exon
so has part: feature:145737-145901:-1:exon
so has part: feature:145259-145402:-1:exon
so has part: feature:144610-144734:-1:exon
so has part: feature:144298-144403:-1:exon
so has part: feature:143682-144068:-1:exon
so has part: feature:143205-143339:-1:exon
so has part: feature:142139-142266:-1:exon
so has part: feature:141570-141684:-1:exon
so has part: feature:140826-140945:-1:exon
so has part: feature:139642-140049:-1:exon
so has part: feature:138773-138965:-1:exon
so has part: feature:138075-138290:-1:exon
so has part: feature:137597-137826:-1:exon
so has part: feature:137165-137299:-1:exon
so has part: feature:136907-137003:-1:exon
so has part: feature:136296-136460:-1:exon
so has part: feature:135734-135845:-1:exon
so has part: feature:134972-134983:-1:exon
so has part: feature:134108-134224:-1:exon
so has part: feature:133156-133345:-1:exon
so has part: feature:132513-132600:-1:exon
so has part: feature:132163-132186:-1:exon
so has part: feature:130689-130721:-1:exon
so has part: feature:129999-130223:-1:exon
so has part: feature:129799-129902:-1:exon
so has part: feature:128705-128862:-1:exon

XP_041576356.1
type: Protein
SIO_000068: ncbiprotein

position:128705:-1
position: 128705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:184931:-1
position: 184931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:184725-184931:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:179272-179511:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:179084-179105:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:163567-163614:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:160591-160806:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:160000-160224:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:159451-159675:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:158678-158884:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:153782-154003:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:151581-151775:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:150655-150855:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:148201-148346:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:147899-148004:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:147493-147606:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:145737-145901:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:145259-145402:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:144610-144734:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:144298-144403:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:143682-144068:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:143205-143339:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:142139-142266:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:141570-141684:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:140826-140945:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:139642-140049:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:138773-138965:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:138075-138290:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:137597-137826:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:137165-137299:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:136907-137003:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:136296-136460:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:135734-135845:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:134972-134983:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:134108-134224:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:133156-133345:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:132513-132600:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:132163-132186:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:130689-130721:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:129999-130223:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:129799-129902:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:128705-128862:-1:exon

AGRN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: AGRN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: agrin isoform X2
translation: MGARRAGTGRARLLLALGMALGMALLPPARAGCPERELQRREEEANVVLTGTVEEIMNVDPVHHTYSCKVRVWRYLKGKDIVTHEILLDGGNKVVIGGFGDPLICDNQVATGDTRIFFVNPAPQALWPAHRNELMLNSSLMRITLRNLEEVEHCVEEHRKLLADKPNSYFTQTPPPPRDGCRGMLCGFGAVCERSPTEPGQASCVCRKGPCAPVVAPVCGSDHSTYSNECELDRAQCNQQRRIKVVSKGPCGSKDPCAEVTCSFGSSCVPSPDGQAAKCVCPSSCGGVAESPVCGSDGRDYRSLCHLQKHACDAQQDLAKQFDGPCDPCQGVPSEPGRVCRVNPRTRRAELLPRPEDCPPGSGPVCGDDGVTYESECAMGRAGAIRGIDIQKVRSGQCQQQDRCKEECRFNAVCLNRRGAARCSCERISCDGAFRPLCGGDGRTYGSDCQRRRAECLRQAGIAVRHRGPCDLGAPSPCLSVECSFGATCVVKNQAAVCECQQQCQGRYDPVCGTDQRTYGSPCELHAMACLLQRDIGLRHRGPCERCGKCRFGAICEAETGRCVCPTECVPSAQPVCGSDGNTYGSECELHVRACTQQENILVAAQGPCKPCGSSLCSFGGRCEGGQCLCPRCERQPPAPVCGSDGVTYPSPCQLQVASCQLQKSIQVARTGPCEDECGSGGSGSGDGGECEQERCRHFGGWWDEDAEDEPCVCDFTCAAAPRAPVCGSDGVTYANECQLKKTRCEKRQELFVTSQGACRALATTPPPLLAVHCSQSVYGCCPDNVTAALGVGAAGCPSSCQCNPHGSYGGSCEPGSGQCSCKPGVGGLRCDRCEPGFWNFRGIVTDGRSGCTPCGCDPVGSVRDDCEQMSGLCSCRPGISGMKCSRCPAGSSLGSAGCQPDPSTPRSCQELSCDFGASCVELNGRAHCECPSPLCPEGNATKVCGSDGVTYGDQCQLRTIACRQGQHITVKHVGQCHEPVTPSSPPVPPTPLPTLAPDRLLLPAPPRATPRAPVATGSPPPAQPTERGHPTTRHVTTTARPATTPWVTHGAHRATARPLATAPVPAATGQPGSSQPGSGESGSAEGSGDLDMGTSGDQEASGAGSAGEEEPDEAQVPPTAAIERATCYNSALGCCSDGRTAAADGDGSNCPATKVFQGVLILEEVEGQELFYTPEMADPKSELFGETARSIESALDELFRGSEVRRDFRSVRVRDLGQSSAVRVIVEAHFDPATSYTAADIQGALLKQLRAARRKTILVKKPQQEHIKFMDFDWLPRLVTTTVTTTTGTTAAPGSARRVPAATAALGQPVGSPGQPVGTAGTAGHPGHPVGTVGSPGEPVGTTGTARSPAGTAGSSRGAPPTALPPGTAPAPPPCASQPCRHGGTCRDDGHGFTCSCPAGTAGTTCEKSAVPFVPRFGGGSVLALRTLRAYHTLRVALEFRALEPAGLLLYNAQRHGKDFIALALRGGLVQLRFDTGSGTGTVTSRVPVEPGRWHRLLVTRNRRTGTLAVDGEPPVSGHSPPGTDGLNLDTELFIGGVPEEHRALAFERTGVAGGLRGCVRALSINNRGHELRPGAADVLYGSAVGECGTEPCQPNPCHHGGTCQPRDADAFQCQCPEAYAGPTCALERNPCEPSPCHGSATCQVLPGSGFLCACPLGRHGDLCQQESEQDPAVPFLPQFSGSSYLELPGLQSFVPGLPDRMSLDLVLLARRPRGLILYNGQRSDGGGDFVSLALHGGHLEFRFDLGKGPALLRSREPVPLDTWVSVRLERSGRKGVLRVNGGPAVTGESPKSRKVPHMVLNLKEPLYLGGAPDFSRLARAAAVSSGFEGALQKVLVDGVPVLREQNVRAARQVVPFRGHPCTQEPNPCQPGGTCQPSMAGYQCSCHAGFAGARCEKAIIEKAAGDTEAVAFDGRTYLEFHNAVTRSHLSNEIPAPEALDSPSEPSEKALQSNHFELSIKTEATQGLLLWSGKGLQRSDYIALAIVDGHVQLSYDLGSK…
SIO_010081: AGRN
subclass of: SO_0000673
so part of: AGRN
location: complement(join(128705..128862,129799..129902,129999..130223,130689..130721,132163..132186,132513..132600,133156..133345,134108..134224,134972..134983,135734..135845,136296..136460,136907..137003,137165..137299,137597..137826,138075..138290,138773..138965,139642..140049,140826..140945,141570..141684,142139..142266,143205..143339,143682..144068,144298..144403,144610..144734,145259..145402,145737..145901,147493..147606,147899..148004,148201..148346,150655..150855,151581..151775,153782..154003,158678..158884,159451..159675,160000..160224,160591..160806,163567..163614,169891..169911,179084..179105,179272..179511,184725..184931))
location: region:128705-184931:-1
so has part: feature:184725-184931:-1:exon
so has part: feature:179272-179511:-1:exon
so has part: feature:179084-179105:-1:exon
so has part: feature:169891-169911:-1:exon
so has part: feature:163567-163614:-1:exon
so has part: feature:160591-160806:-1:exon
so has part: feature:160000-160224:-1:exon
so has part: feature:159451-159675:-1:exon
so has part: feature:158678-158884:-1:exon
so has part: feature:153782-154003:-1:exon
so has part: feature:151581-151775:-1:exon
so has part: feature:150655-150855:-1:exon
so has part: feature:148201-148346:-1:exon
so has part: feature:147899-148004:-1:exon
so has part: feature:147493-147606:-1:exon
so has part: feature:145737-145901:-1:exon
so has part: feature:145259-145402:-1:exon
so has part: feature:144610-144734:-1:exon
so has part: feature:144298-144403:-1:exon
so has part: feature:143682-144068:-1:exon
so has part: feature:143205-143339:-1:exon
so has part: feature:142139-142266:-1:exon
so has part: feature:141570-141684:-1:exon
so has part: feature:140826-140945:-1:exon
so has part: feature:139642-140049:-1:exon
so has part: feature:138773-138965:-1:exon
so has part: feature:138075-138290:-1:exon
so has part: feature:137597-137826:-1:exon
so has part: feature:137165-137299:-1:exon
so has part: feature:136907-137003:-1:exon
so has part: feature:136296-136460:-1:exon
so has part: feature:135734-135845:-1:exon
so has part: feature:134972-134983:-1:exon
so has part: feature:134108-134224:-1:exon
so has part: feature:133156-133345:-1:exon
so has part: feature:132513-132600:-1:exon
so has part: feature:132163-132186:-1:exon
so has part: feature:130689-130721:-1:exon
so has part: feature:129999-130223:-1:exon
so has part: feature:129799-129902:-1:exon
so has part: feature:128705-128862:-1:exon

XP_041576354.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:184725-184931:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:179272-179511:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:179084-179105:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:169891-169911:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:163567-163614:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:160591-160806:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:160000-160224:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:159451-159675:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:158678-158884:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:153782-154003:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:151581-151775:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:150655-150855:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:148201-148346:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:147899-148004:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:147493-147606:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:145737-145901:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:145259-145402:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:144610-144734:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:144298-144403:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:143682-144068:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:143205-143339:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:142139-142266:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:141570-141684:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:140826-140945:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:139642-140049:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:138773-138965:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:138075-138290:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:137597-137826:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:137165-137299:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:136907-137003:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:136296-136460:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:135734-135845:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:134972-134983:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:134108-134224:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:133156-133345:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:132513-132600:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:132163-132186:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:130689-130721:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:129999-130223:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:129799-129902:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:128705-128862:-1:exon

AGRN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: AGRN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: agrin isoform X3
translation: MGARRAGTGRARLLLALGMALGMALLPPARAGCPERELQRREEEANVVLTGTVEEIMNVDPVHHTYSCKVRVWRYLKGKDIVTHEILLDGGNKVVIGGFGDPLICDNQVATGDTRIFFVNPAPQALWPAHRNELMLNSSLMRITLRNLEEVEHCVEEHRKLLADKPNSYFTQTPPPPRDGCRGMLCGFGAVCERSPTEPGQASCVCRKGPCAPVVAPVCGSDHSTYSNECELDRAQCNQQRRIKVVSKGPCGSKDPCAEVTCSFGSSCVPSPDGQAAKCVCPSSCGGVAESPVCGSDGRDYRSLCHLQKHACDAQQDLAKQFDGPCDPCQGVPSEPGRVCRVNPRTRRAELLPRPEDCPPGSGPVCGDDGVTYESECAMGRAGAIRGIDIQKVRSGQCQQQDRCKEECRFNAVCLNRRGAARCSCERISCDGAFRPLCGGDGRTYGSDCQRRRAECLRQAGIAVRHRGPCDLGAPSPCLSVECSFGATCVVKNQAAVCECQQQCQGRYDPVCGTDQRTYGSPCELHAMACLLQRDIGLRHRGPCERCGKCRFGAICEAETGRCVCPTECVPSAQPVCGSDGNTYGSECELHVRACTQQENILVAAQGPCKPCGSSLCSFGGRCEGGQCLCPRCERQPPAPVCGSDGVTYPSPCQLQVASCQLQKSIQVARTGPCEDECGSGGSGSGDGGECEQERCRHFGGWWDEDAEDEPCVCDFTCAAAPRAPVCGSDGVTYANECQLKKTRCEKRQELFVTSQGACRALATTPPPLLAVHCSQSVYGCCPDNVTAALGVGAAGCPSSCQCNPHGSYGGSCEPGSGQCSCKPGVGGLRCDRCEPGFWNFRGIVTDGRSGCTPCGCDPVGSVRDDCEQMSGLCSCRPGISGMKCSRCPAGSSLGSAGCQPDPSTPRSCQELSCDFGASCVELNGRAHCECPSPLCPEGNATKVCGSDGVTYGDQCQLRTIACRQGQHITVKHVGQCHEPVTPSSPPVPPTPLPTLAPDRLLLPAPPRATPRAPVATGSPPPAQPTERGHPTTRHVTTTARPATTPWVTHGAHRATARPLATAPVPAATGQPGSSQPGSGESGSAEGSGDLDMGTSGDQEASGAGSAGEEEPDEAQVPPTAAIERATCYNSALGCCSDGRTAAADGDGSNCPATKVFQGVLILEEVEGQELFYTPEMADPKSELFGETARSIESALDELFRGSEVRRDFRSVRVRDLGQSSAVRVIVEAHFDPATSYTAADIQGALLKQLRAARRKTILVKKPQQEHIKFMDFDWLPRLVTTTVTTTTGTTAAPGSARRVPAATAALGQPVGSPGQPVGTAGTAGHPGHPVGTVGSPGEPVGTTGTARSPAGTAGSSRGAPPTALPPGTAPAPPPCASQPCRHGGTCRDDGHGFTCSCPAGTAGTTCEKSAVPFVPRFGGGSVLALRTLRAYHTLRVALEFRALEPAGLLLYNAQRHGKDFIALALRGGLVQLRFDTGSGTGTVTSRVPVEPGRWHRLLVTRNRRTGTLAVDGEPPVSGHSPPGTDGLNLDTELFIGGVPEEHRALAFERTGVAGGLRGCVRALSINNRGHELRPGAADVLYGSAVGECGTEPCQPNPCHHGGTCQPRDADAFQCQCPEAYAGPTCALERNPCEPSPCHGSATCQVLPGSGFLCACPLGRHGDLCQQESEQDPAVPFLPQFSGSSYLELPGLQSFVPGLPDRMSLDLVLLARRPRGLILYNGQRSDGGGDFVSLALHGGHLEFRFDLGKGPALLRSREPVPLDTWVSVRLERSGRKGVLRVNGGPAVTGESPVPHMVLNLKEPLYLGGAPDFSRLARAAAVSSGFEGALQKVLVDGVPVLREQNVRAARQVVPFRGHPCTQEPNPCQPGGTCQPSMAGYQCSCHAGFAGARCEKAIIEKAAGDTEAVAFDGRTYLEFHNAVTRSHLSNEIPAPEALDSPSEPSEKALQSNHFELSIKTEATQGLLLWSGKGLQRSDYIALAIVDGHVQLSYDLGSKGVTL…
SIO_010081: AGRN
subclass of: SO_0000673
so part of: AGRN
location: complement(join(128705..128862,129799..129902,129999..130223,130689..130721,132163..132186,132513..132600,133156..133345,134108..134224,135734..135845,136296..136460,136907..137003,137165..137299,137597..137826,138075..138290,138773..138965,139642..140049,140826..140945,141570..141684,142139..142266,143205..143339,143682..144068,144298..144403,144610..144734,145259..145402,145737..145901,147493..147606,147899..148004,148201..148346,150655..150855,151581..151775,153782..154003,158678..158884,159451..159675,160000..160224,160591..160806,163567..163614,169891..169911,179250..179511,184725..184931))
location: region:128705-184931:-1
so has part: feature:184725-184931:-1:exon
so has part: feature:179250-179511:-1:exon
so has part: feature:169891-169911:-1:exon
so has part: feature:163567-163614:-1:exon
so has part: feature:160591-160806:-1:exon
so has part: feature:160000-160224:-1:exon
so has part: feature:159451-159675:-1:exon
so has part: feature:158678-158884:-1:exon
so has part: feature:153782-154003:-1:exon
so has part: feature:151581-151775:-1:exon
so has part: feature:150655-150855:-1:exon
so has part: feature:148201-148346:-1:exon
so has part: feature:147899-148004:-1:exon
so has part: feature:147493-147606:-1:exon
so has part: feature:145737-145901:-1:exon
so has part: feature:145259-145402:-1:exon
so has part: feature:144610-144734:-1:exon
so has part: feature:144298-144403:-1:exon
so has part: feature:143682-144068:-1:exon
so has part: feature:143205-143339:-1:exon
so has part: feature:142139-142266:-1:exon
so has part: feature:141570-141684:-1:exon
so has part: feature:140826-140945:-1:exon
so has part: feature:139642-140049:-1:exon
so has part: feature:138773-138965:-1:exon
so has part: feature:138075-138290:-1:exon
so has part: feature:137597-137826:-1:exon
so has part: feature:137165-137299:-1:exon
so has part: feature:136907-137003:-1:exon
so has part: feature:136296-136460:-1:exon
so has part: feature:135734-135845:-1:exon
so has part: feature:134108-134224:-1:exon
so has part: feature:133156-133345:-1:exon
so has part: feature:132513-132600:-1:exon
so has part: feature:132163-132186:-1:exon
so has part: feature:130689-130721:-1:exon
so has part: feature:129999-130223:-1:exon
so has part: feature:129799-129902:-1:exon
so has part: feature:128705-128862:-1:exon

XP_041576355.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:184725-184931:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:179250-179511:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:169891-169911:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:163567-163614:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:160591-160806:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:160000-160224:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:159451-159675:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:158678-158884:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:153782-154003:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:151581-151775:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:150655-150855:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:148201-148346:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:147899-148004:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:147493-147606:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:145737-145901:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:145259-145402:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:144610-144734:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:144298-144403:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:143682-144068:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:143205-143339:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:142139-142266:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:141570-141684:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:140826-140945:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:139642-140049:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:138773-138965:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:138075-138290:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:137597-137826:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:137165-137299:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:136907-137003:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:136296-136460:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:135734-135845:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:134108-134224:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:133156-133345:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:132513-132600:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:132163-132186:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:130689-130721:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:129999-130223:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:129799-129902:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:128705-128862:-1:exon

AGRN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: AGRN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: agrin isoform X6
translation: MGARRAGTGRARLLLALGMALGMALLPPARAGCPERELQRREEEANVVLTGTVEEIMNVDPVHHTYSCKVRVWRYLKGKDIVTHEILLDGGNKVVIGGFGDPLICDNQVATGDTRIFFVNPAPQALWPAHRNELMLNSSLMRITLRNLEEVEHCVEEHRKLLADKPNSYFTQTPPPPRDGCRGMLCGFGAVCERSPTEPGQASCVCRKGPCAPVVAPVCGSDHSTYSNECELDRAQCNQQRRIKVVSKGPCGSKDPCAEVTCSFGSSCVPSPDGQAAKCVCPSSCGGVAESPVCGSDGRDYRSLCHLQKHACDAQQDLAKQFDGPCDPCQGVPSEPGRVCRVNPRTRRAELLPRPEDCPPGSGPVCGDDGVTYESECAMGRAGAIRGIDIQKVRSGQCQQQDRCKEECRFNAVCLNRRGAARCSCERISCDGAFRPLCGGDGRTYGSDCQRRRAECLRQAGIAVRHRGPCDLGAPSPCLSVECSFGATCVVKNQAAVCECQQQCQGRYDPVCGTDQRTYGSPCELHAMACLLQRDIGLRHRGPCERCGKCRFGAICEAETGRCVCPTECVPSAQPVCGSDGNTYGSECELHVRACTQQENILVAAQGPCKPCGSSLCSFGGRCEGGQCLCPRCERQPPAPVCGSDGVTYPSPCQLQVASCQLQKSIQVARTGPCEDECGSGGSGSGDGGECEQERCRHFGGWWDEDAEDEPCVCDFTCAAAPRAPVCGSDGVTYANECQLKKTRCEKRQELFVTSQGACRALATTPPPLLAVHCSQSVYGCCPDNVTAALGVGAAGCPSSCQCNPHGSYGGSCEPGSGQCSCKPGVGGLRCDRCEPGFWNFRGIVTDGRSGCTPCGCDPVGSVRDDCEQMSGLCSCRPGISGMKCSRCPAGSSLGSAGCQPDPSTPRSCQELSCDFGASCVELNGRAHCECPSPLCPEGNATKVCGSDGVTYGDQCQLRTIACRQGQHITVKHVGQCHEPVTPSSPPVPPTPLPTLAPDRLLLPAPPRATPRAPVATGSPPPAQPTERGHPTTRHVTTTARPATTPWVTHGAHRATARPLATAPVPAATGQPGSSQPGSGESGSAEGSGDLDMGTSGDQEASGAGSAGEEEPDEAQVPPTAAIERATCYNSALGCCSDGRTAAADGDGSNCPATKVFQGVLILEEVEGQELFYTPEMADPKSELFGETARSIESALDELFRGSEVRRDFRSVRVRDLGQSSAVRVIVEAHFDPATSYTAADIQGALLKQLRAARRKTILVKKPQQEHIKFMDFDWLPRLVTTTVTTTTGTTAAPGSARRVPAATAALGQPVGSPGQPVGTAGTAGHPGHPVGTVGSPGEPVGTTGTARSPAGTAGSSRGAPPTALPPGTAPAPPPCASQPCRHGGTCRDDGHGFTCSCPAGTAGTTCEKSAVPFVPRFGGGSVLALRTLRAYHTLRVALEFRALEPAGLLLYNAQRHGKDFIALALRGGLVQLRFDTGSGTGTVTSRVPVEPGRWHRLLVTRNRRTGTLAVDGEPPVSGHSPPGTDGLNLDTELFIGGVPEEHRALAFERTGVAGGLRGCVRALSINNRGHELRPGAADVLYGSAVGECGTEPCQPNPCHHGGTCQPRDADAFQCQCPEAYAGPTCALERNPCEPSPCHGSATCQVLPGSGFLCACPLGRHGDLCQQESEQDPAVPFLPQFSGSSYLELPGLQSFVPGLPDRMSLDLVLLARRPRGLILYNGQRSDGGGDFVSLALHGGHLEFRFDLGKGPALLRSREPVPLDTWVSVRLERSGRKGVLRVNGGPAVTGESPKSRKVPHMVLNLKEPLYLGGAPDFSRLARAAAVSSGFEGALQKVLVDGVPVLREQNVRAARQVVPFRGHPCTQEPNPCQPGGTCQPSMAGYQCSCHAGFAGARCEKAIIEKAAGDTEAVAFDGRTYLEFHNAVTRSEKALQSNHFELSIKTEATQGLLLWSGKGLQRSDYIALAIVDGHVQLSYDLGSKGVTLRSSVPVNTNQWVRIR…
SIO_010081: AGRN
subclass of: SO_0000673
so part of: AGRN
location: complement(join(128705..128862,129799..129902,129999..130223,132513..132600,133156..133345,134108..134224,134972..134983,135734..135845,136296..136460,136907..137003,137165..137299,137597..137826,138075..138290,138773..138965,139642..140049,140826..140945,141570..141684,142139..142266,143205..143339,143682..144068,144298..144403,144610..144734,145259..145402,145737..145901,147493..147606,147899..148004,148201..148346,150655..150855,151581..151775,153782..154003,158678..158884,159451..159675,160000..160224,160591..160806,163567..163614,169891..169911,179250..179511,184725..184931))
location: region:128705-184931:-1
so has part: feature:184725-184931:-1:exon
so has part: feature:179250-179511:-1:exon
so has part: feature:169891-169911:-1:exon
so has part: feature:163567-163614:-1:exon
so has part: feature:160591-160806:-1:exon
so has part: feature:160000-160224:-1:exon
so has part: feature:159451-159675:-1:exon
so has part: feature:158678-158884:-1:exon
so has part: feature:153782-154003:-1:exon
so has part: feature:151581-151775:-1:exon
so has part: feature:150655-150855:-1:exon
so has part: feature:148201-148346:-1:exon
so has part: feature:147899-148004:-1:exon
so has part: feature:147493-147606:-1:exon
so has part: feature:145737-145901:-1:exon
so has part: feature:145259-145402:-1:exon
so has part: feature:144610-144734:-1:exon
so has part: feature:144298-144403:-1:exon
so has part: feature:143682-144068:-1:exon
so has part: feature:143205-143339:-1:exon
so has part: feature:142139-142266:-1:exon
so has part: feature:141570-141684:-1:exon
so has part: feature:140826-140945:-1:exon
so has part: feature:139642-140049:-1:exon
so has part: feature:138773-138965:-1:exon
so has part: feature:138075-138290:-1:exon
so has part: feature:137597-137826:-1:exon
so has part: feature:137165-137299:-1:exon
so has part: feature:136907-137003:-1:exon
so has part: feature:136296-136460:-1:exon
so has part: feature:135734-135845:-1:exon
so has part: feature:134972-134983:-1:exon
so has part: feature:134108-134224:-1:exon
so has part: feature:133156-133345:-1:exon
so has part: feature:132513-132600:-1:exon
so has part: feature:129999-130223:-1:exon
so has part: feature:129799-129902:-1:exon
so has part: feature:128705-128862:-1:exon

XP_041576358.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:184725-184931:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:179250-179511:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:169891-169911:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:163567-163614:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:160591-160806:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:160000-160224:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:159451-159675:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:158678-158884:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:153782-154003:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:151581-151775:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:150655-150855:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:148201-148346:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:147899-148004:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:147493-147606:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:145737-145901:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:145259-145402:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:144610-144734:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:144298-144403:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:143682-144068:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:143205-143339:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:142139-142266:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:141570-141684:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:140826-140945:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:139642-140049:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:138773-138965:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:138075-138290:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:137597-137826:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:137165-137299:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:136907-137003:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:136296-136460:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:135734-135845:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:134972-134983:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:134108-134224:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:133156-133345:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:132513-132600:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:129999-130223:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:129799-129902:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:128705-128862:-1:exon

AGRN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: AGRN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: agrin isoform X5
translation: MGARRAGTGRARLLLALGMALGMALLPPARAGCPERELQRREEEANVVLTGTVEEIMNVDPVHHTYSCKVRVWRYLKGKDIVTHEILLDGGNKVVIGGFGDPLICDNQVATGDTRIFFVNPAPQALWPAHRNELMLNSSLMRITLRNLEEVEHCVEEHRKLLADKPNSYFTQTPPPPRDGCRGMLCGFGAVCERSPTEPGQASCVCRKGPCAPVVAPVCGSDHSTYSNECELDRAQCNQQRRIKVVSKGPCGSKDPCAEVTCSFGSSCVPSPDGQAAKCVCPSSCGGVAESPVCGSDGRDYRSLCHLQKHACDAQQDLAKQFDGPCDPCQGVPSEPGRVCRVNPRTRRAELLPRPEDCPPGSGPVCGDDGVTYESECAMGRAGAIRGIDIQKVRSGQCQQQDRCKEECRFNAVCLNRRGAARCSCERISCDGAFRPLCGGDGRTYGSDCQRRRAECLRQAGIAVRHRGPCDLGAPSPCLSVECSFGATCVVKNQAAVCECQQQCQGRYDPVCGTDQRTYGSPCELHAMACLLQRDIGLRHRGPCERCGKCRFGAICEAETGRCVCPTECVPSAQPVCGSDGNTYGSECELHVRACTQQENILVAAQGPCKPCGSSLCSFGGRCEGGQCLCPRCERQPPAPVCGSDGVTYPSPCQLQVASCQLQKSIQVARTGPCEDECGSGGSGSGDGGECEQERCRHFGGWWDEDAEDEPCVCDFTCAAAPRAPVCGSDGVTYANECQLKKTRCEKRQELFVTSQGACRALATTPPPLLAVHCSQSVYGCCPDNVTAALGVGAAGCPSSCQCNPHGSYGGSCEPGSGQCSCKPGVGGLRCDRCEPGFWNFRGIVTDGRSGCTPCGCDPVGSVRDDCEQMSGLCSCRPGISGMKCSRCPAGSSLGSAGCQPDPSTPRSCQELSCDFGASCVELNGRAHCECPSPLCPEGNATKVCGSDGVTYGDQCQLRTIACRQGQHITVKHVGQCHEPVTPSSPPVPPTPLPTLAPDRLLLPAPPRATPRAPVATGSPPPAQPTERGHPTTRHVTTTARPATTPWVTHGAHRATARPLATAPVPAATGQPGSSQPGSGESGSAEGSGDLDMGTSGDQEASGAGSAGEEEPDEAQVPPTAAIERATCYNSALGCCSDGRTAAADGDGSNCPATKVFQGVLILEEVEGQELFYTPEMADPKSELFGETARSIESALDELFRGSEVRRDFRSVRVRDLGQSSAVRVIVEAHFDPATSYTAADIQGALLKQLRAARRKTILVKKPQQEHIKFMDFDWLPRLVTTTVTTTTGTTAAPGSARRVPAATAALGQPVGSPGQPVGTAGTAGHPGHPVGTVGSPGEPVGTTGTARSPAGTAGSSRGAPPTALPPGTAPAPPPCASQPCRHGGTCRDDGHGFTCSCPAGTAGTTCEKSAVPFVPRFGGGSVLALRTLRAYHTLRVALEFRALEPAGLLLYNAQRHGKDFIALALRGGLVQLRFDTGSGTGTVTSRVPVEPGRWHRLLVTRNRRTGTLAVDGEPPVSGHSPPGTDGLNLDTELFIGGVPEEHRALAFERTGVAGGLRGCVRALSINNRGHELRPGAADVLYGSAVGECGTEPCQPNPCHHGGTCQPRDADAFQCQCPEAYAGPTCALERNPCEPSPCHGSATCQVLPGSGFLCACPLGRHGDLCQQESEQDPAVPFLPQFSGSSYLELPGLQSFVPGLPDRMSLDLVLLARRPRGLILYNGQRSDGGGDFVSLALHGGHLEFRFDLGKGPALLRSREPVPLDTWVSVRLERSGRKGVLRVNGGPAVTGESPKSRKVPHMVLNLKEPLYLGGAPDFSRLARAAAVSSGFEGALQKVLVDGVPVLREQNVRAARQVVPFRGHPCTQEPNPCQPGGTCQPSMAGYQCSCHAGFAGARCEKAIIEKAAGDTEAVAFDGRTYLEFHNAVTRSPEALDSPSEPSEKALQSNHFELSIKTEATQGLLLWSGKGLQRSDYIALAIVDGHVQLSYDLGSKGVTLRSSV…
SIO_010081: AGRN
subclass of: SO_0000673
so part of: AGRN
location: complement(join(128705..128862,129799..129902,129999..130223,130689..130721,132513..132600,133156..133345,134108..134224,134972..134983,135734..135845,136296..136460,136907..137003,137165..137299,137597..137826,138075..138290,138773..138965,139642..140049,140826..140945,141570..141684,142139..142266,143205..143339,143682..144068,144298..144403,144610..144734,145259..145402,145737..145901,147493..147606,147899..148004,148201..148346,150655..150855,151581..151775,153782..154003,158678..158884,159451..159675,160000..160224,160591..160806,163567..163614,169891..169911,179250..179511,184725..184931))
location: region:128705-184931:-1
so has part: feature:184725-184931:-1:exon
so has part: feature:179250-179511:-1:exon
so has part: feature:169891-169911:-1:exon
so has part: feature:163567-163614:-1:exon
so has part: feature:160591-160806:-1:exon
so has part: feature:160000-160224:-1:exon
so has part: feature:159451-159675:-1:exon
so has part: feature:158678-158884:-1:exon
so has part: feature:153782-154003:-1:exon
so has part: feature:151581-151775:-1:exon
so has part: feature:150655-150855:-1:exon
so has part: feature:148201-148346:-1:exon
so has part: feature:147899-148004:-1:exon
so has part: feature:147493-147606:-1:exon
so has part: feature:145737-145901:-1:exon
so has part: feature:145259-145402:-1:exon
so has part: feature:144610-144734:-1:exon
so has part: feature:144298-144403:-1:exon
so has part: feature:143682-144068:-1:exon
so has part: feature:143205-143339:-1:exon
so has part: feature:142139-142266:-1:exon
so has part: feature:141570-141684:-1:exon
so has part: feature:140826-140945:-1:exon
so has part: feature:139642-140049:-1:exon
so has part: feature:138773-138965:-1:exon
so has part: feature:138075-138290:-1:exon
so has part: feature:137597-137826:-1:exon
so has part: feature:137165-137299:-1:exon
so has part: feature:136907-137003:-1:exon
so has part: feature:136296-136460:-1:exon
so has part: feature:135734-135845:-1:exon
so has part: feature:134972-134983:-1:exon
so has part: feature:134108-134224:-1:exon
so has part: feature:133156-133345:-1:exon
so has part: feature:132513-132600:-1:exon
so has part: feature:130689-130721:-1:exon
so has part: feature:129999-130223:-1:exon
so has part: feature:129799-129902:-1:exon
so has part: feature:128705-128862:-1:exon

XP_041576357.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:184725-184931:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:179250-179511:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:169891-169911:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:163567-163614:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:160591-160806:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:160000-160224:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:159451-159675:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:158678-158884:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:153782-154003:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:151581-151775:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:150655-150855:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:148201-148346:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:147899-148004:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:147493-147606:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:145737-145901:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:145259-145402:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:144610-144734:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:144298-144403:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:143682-144068:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:143205-143339:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:142139-142266:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:141570-141684:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:140826-140945:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:139642-140049:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:138773-138965:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:138075-138290:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:137597-137826:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:137165-137299:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:136907-137003:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:136296-136460:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:135734-135845:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:134972-134983:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:134108-134224:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:133156-133345:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:132513-132600:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:130689-130721:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:129999-130223:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:129799-129902:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:128705-128862:-1:exon

AGRN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: AGRN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: agrin isoform X1
translation: MGARRAGTGRARLLLALGMALGMALLPPARAGCPERELQRREEEANVVLTGTVEEIMNVDPVHHTYSCKVRVWRYLKGKDIVTHEILLDGGNKVVIGGFGDPLICDNQVATGDTRIFFVNPAPQALWPAHRNELMLNSSLMRITLRNLEEVEHCVEEHRKLLADKPNSYFTQTPPPPRDGCRGMLCGFGAVCERSPTEPGQASCVCRKGPCAPVVAPVCGSDHSTYSNECELDRAQCNQQRRIKVVSKGPCGSKDPCAEVTCSFGSSCVPSPDGQAAKCVCPSSCGGVAESPVCGSDGRDYRSLCHLQKHACDAQQDLAKQFDGPCDPCQGVPSEPGRVCRVNPRTRRAELLPRPEDCPPGSGPVCGDDGVTYESECAMGRAGAIRGIDIQKVRSGQCQQQDRCKEECRFNAVCLNRRGAARCSCERISCDGAFRPLCGGDGRTYGSDCQRRRAECLRQAGIAVRHRGPCDLGAPSPCLSVECSFGATCVVKNQAAVCECQQQCQGRYDPVCGTDQRTYGSPCELHAMACLLQRDIGLRHRGPCERCGKCRFGAICEAETGRCVCPTECVPSAQPVCGSDGNTYGSECELHVRACTQQENILVAAQGPCKPCGSSLCSFGGRCEGGQCLCPRCERQPPAPVCGSDGVTYPSPCQLQVASCQLQKSIQVARTGPCEDECGSGGSGSGDGGECEQERCRHFGGWWDEDAEDEPCVCDFTCAAAPRAPVCGSDGVTYANECQLKKTRCEKRQELFVTSQGACRALATTPPPLLAVHCSQSVYGCCPDNVTAALGVGAAGCPSSCQCNPHGSYGGSCEPGSGQCSCKPGVGGLRCDRCEPGFWNFRGIVTDGRSGCTPCGCDPVGSVRDDCEQMSGLCSCRPGISGMKCSRCPAGSSLGSAGCQPDPSTPRSCQELSCDFGASCVELNGRAHCECPSPLCPEGNATKVCGSDGVTYGDQCQLRTIACRQGQHITVKHVGQCHEPVTPSSPPVPPTPLPTLAPDRLLLPAPPRATPRAPVATGSPPPAQPTERGHPTTRHVTTTARPATTPWVTHGAHRATARPLATAPVPAATGQPGSSQPGSGESGSAEGSGDLDMGTSGDQEASGAGSAGEEEPDEAQVPPTAAIERATCYNSALGCCSDGRTAAADGDGSNCPATKVFQGVLILEEVEGQELFYTPEMADPKSELFGETARSIESALDELFRGSEVRRDFRSVRVRDLGQSSAVRVIVEAHFDPATSYTAADIQGALLKQLRAARRKTILVKKPQQEHIKFMDFDWLPRLVTTTVTTTTGTTAAPGSARRVPAATAALGQPVGSPGQPVGTAGTAGHPGHPVGTVGSPGEPVGTTGTARSPAGTAGSSRGAPPTALPPGTAPAPPPCASQPCRHGGTCRDDGHGFTCSCPAGTAGTTCEKSAVPFVPRFGGGSVLALRTLRAYHTLRVALEFRALEPAGLLLYNAQRHGKDFIALALRGGLVQLRFDTGSGTGTVTSRVPVEPGRWHRLLVTRNRRTGTLAVDGEPPVSGHSPPGTDGLNLDTELFIGGVPEEHRALAFERTGVAGGLRGCVRALSINNRGHELRPGAADVLYGSAVGECGTEPCQPNPCHHGGTCQPRDADAFQCQCPEAYAGPTCALERNPCEPSPCHGSATCQVLPGSGFLCACPLGRHGDLCQQESEQDPAVPFLPQFSGSSYLELPGLQSFVPGLPDRMSLDLVLLARRPRGLILYNGQRSDGGGDFVSLALHGGHLEFRFDLGKGPALLRSREPVPLDTWVSVRLERSGRKGVLRVNGGPAVTGESPKSRKVPHMVLNLKEPLYLGGAPDFSRLARAAAVSSGFEGALQKVLVDGVPVLREQNVRAARQVVPFRGHPCTQEPNPCQPGGTCQPSMAGYQCSCHAGFAGARCEKAIIEKAAGDTEAVAFDGRTYLEFHNAVTRSHLSNEIPAPEALDSPSEPSEKALQSNHFELSIKTEATQGLLLWSGKGLQRSDYIALAIVDGHVQLSYDLGSK…
SIO_010081: AGRN
subclass of: SO_0000673
so part of: AGRN
location: complement(join(128705..128862,129799..129902,129999..130223,130689..130721,132163..132186,132513..132600,133156..133345,134108..134224,134972..134983,135734..135845,136296..136460,136907..137003,137165..137299,137597..137826,138075..138290,138773..138965,139642..140049,140826..140945,141570..141684,142139..142266,143205..143339,143682..144068,144298..144403,144610..144734,145259..145402,145737..145901,147493..147606,147899..148004,148201..148346,150655..150855,151581..151775,153782..154003,158678..158884,159451..159675,160000..160224,160591..160806,163567..163614,169891..169911,179250..179511,184725..184931))
location: region:128705-184931:-1
so has part: feature:184725-184931:-1:exon
so has part: feature:179250-179511:-1:exon
so has part: feature:169891-169911:-1:exon
so has part: feature:163567-163614:-1:exon
so has part: feature:160591-160806:-1:exon
so has part: feature:160000-160224:-1:exon
so has part: feature:159451-159675:-1:exon
so has part: feature:158678-158884:-1:exon
so has part: feature:153782-154003:-1:exon
so has part: feature:151581-151775:-1:exon
so has part: feature:150655-150855:-1:exon
so has part: feature:148201-148346:-1:exon
so has part: feature:147899-148004:-1:exon
so has part: feature:147493-147606:-1:exon
so has part: feature:145737-145901:-1:exon
so has part: feature:145259-145402:-1:exon
so has part: feature:144610-144734:-1:exon
so has part: feature:144298-144403:-1:exon
so has part: feature:143682-144068:-1:exon
so has part: feature:143205-143339:-1:exon
so has part: feature:142139-142266:-1:exon
so has part: feature:141570-141684:-1:exon
so has part: feature:140826-140945:-1:exon
so has part: feature:139642-140049:-1:exon
so has part: feature:138773-138965:-1:exon
so has part: feature:138075-138290:-1:exon
so has part: feature:137597-137826:-1:exon
so has part: feature:137165-137299:-1:exon
so has part: feature:136907-137003:-1:exon
so has part: feature:136296-136460:-1:exon
so has part: feature:135734-135845:-1:exon
so has part: feature:134972-134983:-1:exon
so has part: feature:134108-134224:-1:exon
so has part: feature:133156-133345:-1:exon
so has part: feature:132513-132600:-1:exon
so has part: feature:132163-132186:-1:exon
so has part: feature:130689-130721:-1:exon
so has part: feature:129999-130223:-1:exon
so has part: feature:129799-129902:-1:exon
so has part: feature:128705-128862:-1:exon

XP_041576353.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:184725-184931:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:179250-179511:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:169891-169911:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:163567-163614:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:160591-160806:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:160000-160224:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:159451-159675:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:158678-158884:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:153782-154003:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:151581-151775:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:150655-150855:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:148201-148346:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:147899-148004:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:147493-147606:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:145737-145901:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:145259-145402:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:144610-144734:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:144298-144403:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:143682-144068:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:143205-143339:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:142139-142266:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:141570-141684:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:140826-140945:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:139642-140049:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:138773-138965:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:138075-138290:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:137597-137826:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:137165-137299:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:136907-137003:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:136296-136460:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:135734-135845:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:134972-134983:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:134108-134224:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:133156-133345:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:132513-132600:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:132163-132186:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:130689-130721:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:129999-130223:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:129799-129902:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:128705-128862:-1:exon

AGRN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: AGRN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: agrin isoform X8
translation: MTACQHPMAALERDRLYQHKVSLVVRYFMIPCNICLILLATSTLGFAVLLFLNNYKPNSYFTQTPPPPRDGCRGMLCGFGAVCERSPTEPGQASCVCRKGPCAPVVAPVCGSDHSTYSNECELDRAQCNQQRRIKVVSKGPCGSKDPCAEVTCSFGSSCVPSPDGQAAKCVCPSSCGGVAESPVCGSDGRDYRSLCHLQKHACDAQQDLAKQFDGPCDPCQGVPSEPGRVCRVNPRTRRAELLPRPEDCPPGSGPVCGDDGVTYESECAMGRAGAIRGIDIQKVRSGQCQQQDRCKEECRFNAVCLNRRGAARCSCERISCDGAFRPLCGGDGRTYGSDCQRRRAECLRQAGIAVRHRGPCDLGAPSPCLSVECSFGATCVVKNQAAVCECQQQCQGRYDPVCGTDQRTYGSPCELHAMACLLQRDIGLRHRGPCERCGKCRFGAICEAETGRCVCPTECVPSAQPVCGSDGNTYGSECELHVRACTQQENILVAAQGPCKPCGSSLCSFGGRCEGGQCLCPRCERQPPAPVCGSDGVTYPSPCQLQVASCQLQKSIQVARTGPCEDECGSGGSGSGDGGECEQERCRHFGGWWDEDAEDEPCVCDFTCAAAPRAPVCGSDGVTYANECQLKKTRCEKRQELFVTSQGACRALATTPPPLLAVHCSQSVYGCCPDNVTAALGVGAAGCPSSCQCNPHGSYGGSCEPGSGQCSCKPGVGGLRCDRCEPGFWNFRGIVTDGRSGCTPCGCDPVGSVRDDCEQMSGLCSCRPGISGMKCSRCPAGSSLGSAGCQPDPSTPRSCQELSCDFGASCVELNGRAHCECPSPLCPEGNATKVCGSDGVTYGDQCQLRTIACRQGQHITVKHVGQCHEPVTPSSPPVPPTPLPTLAPDRLLLPAPPRATPRAPVATGSPPPAQPTERGHPTTRHVTTTARPATTPWVTHGAHRATARPLATAPVPAATGQPGSSQPGSGESGSAEGSGDLDMGTSGDQEASGAGSAGEEEPDEAQVPPTAAIERATCYNSALGCCSDGRTAAADGDGSNCPATKVFQGVLILEEVEGQELFYTPEMADPKSELFGETARSIESALDELFRGSEVRRDFRSVRVRDLGQSSAVRVIVEAHFDPATSYTAADIQGALLKQLRAARRKTILVKKPQQEHIKFMDFDWLPRLVTTTVTTTTGTTAAPGSARRVPAATAALGQPVGSPGQPVGTAGTAGHPGHPVGTVGSPGEPVGTTGTARSPAGTAGSSRGAPPTALPPGTAPAPPPCASQPCRHGGTCRDDGHGFTCSCPAGTAGTTCEKSAVPFVPRFGGGSVLALRTLRAYHTLRVALEFRALEPAGLLLYNAQRHGKDFIALALRGGLVQLRFDTGSGTGTVTSRVPVEPGRWHRLLVTRNRRTGTLAVDGEPPVSGHSPPGTDGLNLDTELFIGGVPEEHRALAFERTGVAGGLRGCVRALSINNRGHELRPGAADVLYGSAVGECGTEPCQPNPCHHGGTCQPRDADAFQCQCPEAYAGPTCALERNPCEPSPCHGSATCQVLPGSGFLCACPLGRHGDLCQQESEQDPAVPFLPQFSGSSYLELPGLQSFVPGLPDRMSLDLVLLARRPRGLILYNGQRSDGGGDFVSLALHGGHLEFRFDLGKGPALLRSREPVPLDTWVSVRLERSGRKGVLRVNGGPAVTGESPKSRKVPHMVLNLKEPLYLGGAPDFSRLARAAAVSSGFEGALQKVLVDGVPVLREQNVRAARQVVPFRGHPCTQEPNPCQPGGTCQPSMAGYQCSCHAGFAGARCEKAIIEKAAGDTEAVAFDGRTYLEFHNAVTRSEKALQSNHFELSIKTEATQGLLLWSGKGLQRSDYIALAIVDGHVQLSYDLGSKGVTLRSSVPVNTNQWVRIRASRVQREGSLQVGNEAPIAGSSPLGATQLDTDGALWLGGLDKPSVPQRLPKAFSTGFVGCMRDVLVDRRELHLQEDALNRPRILHCSAQ
SIO_010081: AGRN
subclass of: SO_0000673
so part of: AGRN
location: complement(join(128705..128862,129799..129902,129999..130223,132513..132600,133156..133345,134108..134224,134972..134983,135734..135845,136296..136460,136907..137003,137165..137299,137597..137826,138075..138290,138773..138965,139642..140049,140826..140945,141570..141684,142139..142266,143205..143339,143682..144068,144298..144403,144610..144734,145259..145402,145737..145901,147493..147606,147899..148004,148201..148346,150655..150855,151581..151775,153782..154003,158678..158884,159451..159675,160000..160224,160591..160806,163567..163614,164900..165062))
location: region:128705-165062:-1
so has part: feature:164900-165062:-1:exon
so has part: feature:163567-163614:-1:exon
so has part: feature:160591-160806:-1:exon
so has part: feature:160000-160224:-1:exon
so has part: feature:159451-159675:-1:exon
so has part: feature:158678-158884:-1:exon
so has part: feature:153782-154003:-1:exon
so has part: feature:151581-151775:-1:exon
so has part: feature:150655-150855:-1:exon
so has part: feature:148201-148346:-1:exon
so has part: feature:147899-148004:-1:exon
so has part: feature:147493-147606:-1:exon
so has part: feature:145737-145901:-1:exon
so has part: feature:145259-145402:-1:exon
so has part: feature:144610-144734:-1:exon
so has part: feature:144298-144403:-1:exon
so has part: feature:143682-144068:-1:exon
so has part: feature:143205-143339:-1:exon
so has part: feature:142139-142266:-1:exon
so has part: feature:141570-141684:-1:exon
so has part: feature:140826-140945:-1:exon
so has part: feature:139642-140049:-1:exon
so has part: feature:138773-138965:-1:exon
so has part: feature:138075-138290:-1:exon
so has part: feature:137597-137826:-1:exon
so has part: feature:137165-137299:-1:exon
so has part: feature:136907-137003:-1:exon
so has part: feature:136296-136460:-1:exon
so has part: feature:135734-135845:-1:exon
so has part: feature:134972-134983:-1:exon
so has part: feature:134108-134224:-1:exon
so has part: feature:133156-133345:-1:exon
so has part: feature:132513-132600:-1:exon
so has part: feature:129999-130223:-1:exon
so has part: feature:129799-129902:-1:exon
so has part: feature:128705-128862:-1:exon

XP_030145323.3
type: Protein
SIO_000068: ncbiprotein

position:165062:-1
position: 165062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:164900-165062:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:163567-163614:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:160591-160806:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:160000-160224:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:159451-159675:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:158678-158884:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:153782-154003:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:151581-151775:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:150655-150855:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:148201-148346:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:147899-148004:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:147493-147606:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:145737-145901:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:145259-145402:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:144610-144734:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:144298-144403:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:143682-144068:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:143205-143339:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:142139-142266:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:141570-141684:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:140826-140945:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:139642-140049:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:138773-138965:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:138075-138290:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:137597-137826:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:137165-137299:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:136907-137003:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:136296-136460:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:135734-135845:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:134972-134983:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:134108-134224:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:133156-133345:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:132513-132600:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:129999-130223:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:129799-129902:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:128705-128862:-1:exon

AGRN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: AGRN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: agrin isoform X7
translation: MTACQHPMAALERDRLYQHKVSLVVRYFMIPCNICLILLATSTLGFAVLLFLNNYKPNSYFTQTPPPPRDGCRGMLCGFGAVCERSPTEPGQASCVCRKGPCAPVVAPVCGSDHSTYSNECELDRAQCNQQRRIKVVSKGPCGSKDPCAEVTCSFGSSCVPSPDGQAAKCVCPSSCGGVAESPVCGSDGRDYRSLCHLQKHACDAQQDLAKQFDGPCDPCQGVPSEPGRVCRVNPRTRRAELLPRPEDCPPGSGPVCGDDGVTYESECAMGRAGAIRGIDIQKVRSGQCQQQDRCKEECRFNAVCLNRRGAARCSCERISCDGAFRPLCGGDGRTYGSDCQRRRAECLRQAGIAVRHRGPCDLGAPSPCLSVECSFGATCVVKNQAAVCECQQQCQGRYDPVCGTDQRTYGSPCELHAMACLLQRDIGLRHRGPCERCGKCRFGAICEAETGRCVCPTECVPSAQPVCGSDGNTYGSECELHVRACTQQENILVAAQGPCKPCGSSLCSFGGRCEGGQCLCPRCERQPPAPVCGSDGVTYPSPCQLQVASCQLQKSIQVARTGPCEDECGSGGSGSGDGGECEQERCRHFGGWWDEDAEDEPCVCDFTCAAAPRAPVCGSDGVTYANECQLKKTRCEKRQELFVTSQGACRALATTPPPLLAVHCSQSVYGCCPDNVTAALGVGAAGCPSSCQCNPHGSYGGSCEPGSGQCSCKPGVGGLRCDRCEPGFWNFRGIVTDGRSGCTPCGCDPVGSVRDDCEQMSGLCSCRPGISGMKCSRCPAGSSLGSAGCQPDPSTPRSCQELSCDFGASCVELNGRAHCECPSPLCPEGNATKVCGSDGVTYGDQCQLRTIACRQGQHITVKHVGQCHEPVTPSSPPVPPTPLPTLAPDRLLLPAPPRATPRAPVATGSPPPAQPTERGHPTTRHVTTTARPATTPWVTHGAHRATARPLATAPVPAATGQPGSSQPGSGESGSAEGSGDLDMGTSGDQEASGAGSAGEEEPDEAQVPPTAAIERATCYNSALGCCSDGRTAAADGDGSNCPATKVFQGVLILEEVEGQELFYTPEMADPKSELFGETARSIESALDELFRGSEVRRDFRSVRVRDLGQSSAVRVIVEAHFDPATSYTAADIQGALLKQLRAARRKTILVKKPQQEHIKFMDFDWLPRLVTTTVTTTTGTTAAPGSARRVPAATAALGQPVGSPGQPVGTAGTAGHPGHPVGTVGSPGEPVGTTGTARSPAGTAGSSRGAPPTALPPGTAPAPPPCASQPCRHGGTCRDDGHGFTCSCPAGTAGTTCEKSAVPFVPRFGGGSVLALRTLRAYHTLRVALEFRALEPAGLLLYNAQRHGKDFIALALRGGLVQLRFDTGSGTGTVTSRVPVEPGRWHRLLVTRNRRTGTLAVDGEPPVSGHSPPGTDGLNLDTELFIGGVPEEHRALAFERTGVAGGLRGCVRALSINNRGHELRPGAADVLYGSAVGECGTEPCQPNPCHHGGTCQPRDADAFQCQCPEAYAGPTCALERNPCEPSPCHGSATCQVLPGSGFLCACPLGRHGDLCQQESEQDPAVPFLPQFSGSSYLELPGLQSFVPGLPDRMSLDLVLLARRPRGLILYNGQRSDGGGDFVSLALHGGHLEFRFDLGKGPALLRSREPVPLDTWVSVRLERSGRKGVLRVNGGPAVTGESPKSRKVPHMVLNLKEPLYLGGAPDFSRLARAAAVSSGFEGALQKVLVDGVPVLREQNVRAARQVVPFRGHPCTQEPNPCQPGGTCQPSMAGYQCSCHAGFAGARCEKAIIEKAAGDTEAVAFDGRTYLEFHNAVTRSHLSNEIPAPEALDSPSEPSEKALQSNHFELSIKTEATQGLLLWSGKGLQRSDYIALAIVDGHVQLSYDLGSKGVTLRSSVPVNTNQWVRIRASRVQREGSLQVGNEAPIAGSSPLGATQLDTDGALWLGGLDKPSVPQRLPKAFSTGFVGCMRDVLVDRRELHLQEDALNRPRILHCSAQ
SIO_010081: AGRN
subclass of: SO_0000673
so part of: AGRN
location: complement(join(128705..128862,129799..129902,129999..130223,130689..130721,132163..132186,132513..132600,133156..133345,134108..134224,134972..134983,135734..135845,136296..136460,136907..137003,137165..137299,137597..137826,138075..138290,138773..138965,139642..140049,140826..140945,141570..141684,142139..142266,143205..143339,143682..144068,144298..144403,144610..144734,145259..145402,145737..145901,147493..147606,147899..148004,148201..148346,150655..150855,151581..151775,153782..154003,158678..158884,159451..159675,160000..160224,160591..160806,163567..163614,164900..165062))
location: region:128705-165062:-1
so has part: feature:164900-165062:-1:exon
so has part: feature:163567-163614:-1:exon
so has part: feature:160591-160806:-1:exon
so has part: feature:160000-160224:-1:exon
so has part: feature:159451-159675:-1:exon
so has part: feature:158678-158884:-1:exon
so has part: feature:153782-154003:-1:exon
so has part: feature:151581-151775:-1:exon
so has part: feature:150655-150855:-1:exon
so has part: feature:148201-148346:-1:exon
so has part: feature:147899-148004:-1:exon
so has part: feature:147493-147606:-1:exon
so has part: feature:145737-145901:-1:exon
so has part: feature:145259-145402:-1:exon
so has part: feature:144610-144734:-1:exon
so has part: feature:144298-144403:-1:exon
so has part: feature:143682-144068:-1:exon
so has part: feature:143205-143339:-1:exon
so has part: feature:142139-142266:-1:exon
so has part: feature:141570-141684:-1:exon
so has part: feature:140826-140945:-1:exon
so has part: feature:139642-140049:-1:exon
so has part: feature:138773-138965:-1:exon
so has part: feature:138075-138290:-1:exon
so has part: feature:137597-137826:-1:exon
so has part: feature:137165-137299:-1:exon
so has part: feature:136907-137003:-1:exon
so has part: feature:136296-136460:-1:exon
so has part: feature:135734-135845:-1:exon
so has part: feature:134972-134983:-1:exon
so has part: feature:134108-134224:-1:exon
so has part: feature:133156-133345:-1:exon
so has part: feature:132513-132600:-1:exon
so has part: feature:132163-132186:-1:exon
so has part: feature:130689-130721:-1:exon
so has part: feature:129999-130223:-1:exon
so has part: feature:129799-129902:-1:exon
so has part: feature:128705-128862:-1:exon

XP_030145322.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:164900-165062:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:163567-163614:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:160591-160806:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:160000-160224:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:159451-159675:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:158678-158884:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:153782-154003:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:151581-151775:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:150655-150855:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:148201-148346:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:147899-148004:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:147493-147606:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:145737-145901:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:145259-145402:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:144610-144734:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:144298-144403:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:143682-144068:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:143205-143339:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:142139-142266:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:141570-141684:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:140826-140945:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:139642-140049:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:138773-138965:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:138075-138290:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:137597-137826:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:137165-137299:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:136907-137003:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:136296-136460:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:135734-135845:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:134972-134983:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:134108-134224:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:133156-133345:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:132513-132600:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:132163-132186:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:130689-130721:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:129999-130223:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:129799-129902:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:128705-128862:-1:exon

LOC116809208
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC116809208
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(195945..201955)
location: region:195945-201955:-1
so has part: feature:195945-201955:-1:exon
subclass of: SO_0000011

116809208
type: Gene
SIO_000068: ncbigene

position:195945:-1
position: 195945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:201955:-1
position: 201955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:195945-201955:-1:exon

LOC116809208
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC116809208
product: uncharacterized LOC116809208
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_005982358.1
SIO_010081: LOC116809208
subclass of: SO_0000673
so part of: LOC116809208
location: complement(join(195945..197336,197572..197686,200892..200959,201747..201955))
location: region:195945-201955:-1
so has part: feature:201747-201955:-1:exon
so has part: feature:200892-200959:-1:exon
so has part: feature:197572-197686:-1:exon
so has part: feature:195945-197336:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:201747-201955:-1:exon

position:201747:-1
position: 201747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:200892-200959:-1:exon

position:200892:-1
position: 200892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:200959:-1
position: 200959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:197572-197686:-1:exon

position:197572:-1
position: 197572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:197686:-1
position: 197686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:195945-197336:-1:exon

position:197336:-1
position: 197336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116809207
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC116809207
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(211156..212308)
location: region:211156-212308:-1
so has part: feature:211156-212308:-1:exon
subclass of: SO_0000011

116809207
type: Gene
SIO_000068: ncbigene

position:211156:-1
position: 211156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:212308:-1
position: 212308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:211156-212308:-1:exon

LOC116809207
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC116809207
product: uncharacterized LOC116809207
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 45 samples with support for all annotated introns
transcript id: XR_004369642.2
SIO_010081: LOC116809207
subclass of: SO_0000673
so part of: LOC116809207
location: complement(join(211156..211547,212050..212308))
location: region:211156-212308:-1
so has part: feature:212050-212308:-1:exon
so has part: feature:211156-211547:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:212050-212308:-1:exon

position:212050:-1
position: 212050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:211156-211547:-1:exon

position:211547:-1
position: 211547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HES4
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: HES4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 215071..217340
location: region:215071-217340:1
so has part: feature:215071-217340:1:exon
subclass of: SO_0000010

115498005
type: Gene
SIO_000068: ncbigene

position:215071:1
position: 215071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:217340:1
position: 217340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:215071-217340:1:exon

HES4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: HES4
product: hes family bHLH transcription factor 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 106 samples with support for all annotated introns
transcript id: XM_030289300.3
SIO_010081: HES4
subclass of: SO_0000673
so part of: HES4
location: join(215071..215473,215552..215647,215739..215826,216324..217340)
location: region:215071-217340:1
so has part: feature:215071-215473:1:exon
so has part: feature:215552-215647:1:exon
so has part: feature:215739-215826:1:exon
so has part: feature:216324-217340:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:215071-215473:1:exon

position:215473:1
position: 215473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:215552-215647:1:exon

position:215552:1
position: 215552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:215647:1
position: 215647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:215739-215826:1:exon

position:215739:1
position: 215739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:215826:1
position: 215826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:216324-217340:1:exon

position:216324:1
position: 216324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HES4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: HES4
product: hes family bHLH transcription factor 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_030289301.3
SIO_010081: HES4
subclass of: SO_0000673
so part of: HES4
location: join(215073..215377,215552..215647,215739..215826,216324..217340)
location: region:215073-217340:1
so has part: feature:215073-215377:1:exon
so has part: feature:215552-215647:1:exon
so has part: feature:215739-215826:1:exon
so has part: feature:216324-217340:1:exon

position:215073:1
position: 215073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:215073-215377:1:exon

position:215377:1
position: 215377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:215552-215647:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:215739-215826:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:216324-217340:1:exon

HES4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: HES4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor HES-4 isoform X1
translation: MPADTGMEKPTASPIAGAPASASHTPDKPRSASEHRKVNGGGGGGGGCRSGRSGGGGGAGWRQARGRAESSKPIMEKRRRARINESLGQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQRAQMTAALSADPTVLGKYRAGFNECMNEVTRFLSTCEGVNADVRTRLLSHLSACLGQIVAMNYPPPPPPPPPPAQPAHLAQQPLHVQLPPAAAAAVPVPCKLNPAEALSPKVYGGFQLVPATDGQFAFLIPSPAFPAGSGPVIPLYANANAPVAAGGGSGSAAATPSVSPVQGLTSFGGSIGPASQAGSPVGGERSESVWRPW
SIO_010081: HES4
subclass of: SO_0000673
so part of: HES4
location: join(215267..215473,215552..215647,215739..215826,216324..216919)
location: region:215267-216919:1
so has part: feature:215267-215473:1:exon
so has part: feature:215552-215647:1:exon
so has part: feature:215739-215826:1:exon
so has part: feature:216324-216919:1:exon

XP_030145160.3
type: Protein
SIO_000068: ncbiprotein

position:215267:1
position: 215267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:216919:1
position: 216919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:215267-215473:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:215552-215647:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:215739-215826:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:216324-216919:1:exon

HES4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: HES4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor HES-4 isoform X2
translation: MPADTGMEKPTASPIAGAPASASHTPDKPRSASEHRKSSKPIMEKRRRARINESLGQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQRAQMTAALSADPTVLGKYRAGFNECMNEVTRFLSTCEGVNADVRTRLLSHLSACLGQIVAMNYPPPPPPPPPPAQPAHLAQQPLHVQLPPAAAAAVPVPCKLNPAEALSPKVYGGFQLVPATDGQFAFLIPSPAFPAGSGPVIPLYANANAPVAAGGGSGSAAATPSVSPVQGLTSFGGSIGPASQAGSPVGGERSESVWRPW
SIO_010081: HES4
subclass of: SO_0000673
so part of: HES4
location: join(215267..215377,215552..215647,215739..215826,216324..216919)
location: region:215267-216919:1
so has part: feature:215267-215377:1:exon
so has part: feature:215552-215647:1:exon
so has part: feature:215739-215826:1:exon
so has part: feature:216324-216919:1:exon

XP_030145161.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:215267-215377:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:215552-215647:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:215739-215826:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:216324-216919:1:exon

PERM1
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: PERM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 259349..266091
location: region:259349-266091:1
so has part: feature:259349-266091:1:exon
subclass of: SO_0000010

115498035
type: Gene
SIO_000068: ncbigene

position:259349:1
position: 259349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:266091:1
position: 266091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:259349-266091:1:exon

PERM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: PERM1
product: PPARGC1 and ESRR induced regulator, muscle 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_030289394.3
SIO_010081: PERM1
subclass of: SO_0000673
so part of: PERM1
location: join(259349..259485,260121..262733,263732..263848,264838..266091)
location: region:259349-266091:1
so has part: feature:259349-259485:1:exon
so has part: feature:260121-262733:1:exon
so has part: feature:263732-263848:1:exon
so has part: feature:264838-266091:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:259349-259485:1:exon

position:259485:1
position: 259485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:260121-262733:1:exon

position:260121:1
position: 260121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:262733:1
position: 262733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:263732-263848:1:exon

position:263732:1
position: 263732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:263848:1
position: 263848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:264838-266091:1:exon

position:264838:1
position: 264838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PERM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: PERM1
product: PPARGC1 and ESRR induced regulator, muscle 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_041720415.1
SIO_010081: PERM1
subclass of: SO_0000673
so part of: PERM1
location: join(259349..259485,260121..262733,263738..263848,264838..266091)
location: region:259349-266091:1
so has part: feature:259349-259485:1:exon
so has part: feature:260121-262733:1:exon
so has part: feature:263738-263848:1:exon
so has part: feature:264838-266091:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:259349-259485:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:260121-262733:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:263738-263848:1:exon

position:263738:1
position: 263738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:264838-266091:1:exon

PERM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: PERM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PGC-1 and ERR-induced regulator in muscle protein 1 isoform X1
translation: MDNFEYSIQLNEREWAEFLRAAEECSLAPASLATAEEQSLSDIEPGDTRGRDCPRGTAGVPAARPGTEPAPGTASPAPRGDTGDTASPAPRGDTGDTAGRGQRSLPEPLAGSEDEAQRGSAGTLLCHSEQPGRQAAAAMPSAQRRQPPRPPAAAPAGGTVPGGSGAAEPPGAPERGGDAAGTQAPPAEPGAGARPEAAAAAAPAEGPAGKSAAPAEPGLRGPAGDPPSPSRGTGPGVAPEEEQTGAEPSSPGGSPGVVRPKVPVQPRKSRKQRGTGGTEGDRDPAAAAAPGGTGAGKAPPGSPVAPRKGRGKDKAAKAALARAGSEEAAENKRALPGPGADGGDAGAAPPKPRGKEPGPQGPGKTKATKPPKAGQAAGLGVRDTVPAVPGDGAAAPPGEVSQEMPGKPLQPGNVAAFGGNAAEGAGGEPAAEIPGIAAAGIPGIAAPEIPGIAAAETSRKPSEIPGIAAAEIPGIAAAEIPGIAAAEMPRKSAAEIPRKSAFEIPRKPSETPEVPAAGIPWKPAAAIPRKPVPEIPWEPAAGIPRTPAAGIPKSPTLGIPWEPATGIPRIPAAEFPRIPAIEIPCEPAADIPTIPAAGIPRIPAIEIPRIPAAEIPRIPAIEIPCEPLGGIPAIPVPGIPTIPAVGIPTIPAVGIPTIPASRTPREAVAELPRAVSPLCFADGAPGKPSCLDVTWPEMYEYLFCDSQEEEELGSSLEGRKSPLQREISWPELYEYFFTEPEGGRKKGKAKDRKRRKFRGLERPGLHQEAPSSAPGKDTVLLSVPDVFERFLPQTAPSRMGWRGIFSTAPASEVKKAVRALSSLLQRQVQLGGDQASTSQALVPRRSGEELALVPLGGAQVWPEDADGALRGAAEDPRLLSHKDMCLVFCAFASWAVKTSDLQAPDAWKTMFLASFGTLSAIRYFRRQVREGHPRT
SIO_010081: PERM1
subclass of: SO_0000673
so part of: PERM1
location: join(260123..262733,263732..263848,264838..264917)
location: region:260123-264917:1
so has part: feature:260123-262733:1:exon
so has part: feature:263732-263848:1:exon
so has part: feature:264838-264917:1:exon

XP_030145254.3
type: Protein
SIO_000068: ncbiprotein

position:260123:1
position: 260123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:264917:1
position: 264917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:260123-262733:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:263732-263848:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:264838-264917:1:exon

PERM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: PERM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PGC-1 and ERR-induced regulator in muscle protein 1 isoform X2
translation: MDNFEYSIQLNEREWAEFLRAAEECSLAPASLATAEEQSLSDIEPGDTRGRDCPRGTAGVPAARPGTEPAPGTASPAPRGDTGDTASPAPRGDTGDTAGRGQRSLPEPLAGSEDEAQRGSAGTLLCHSEQPGRQAAAAMPSAQRRQPPRPPAAAPAGGTVPGGSGAAEPPGAPERGGDAAGTQAPPAEPGAGARPEAAAAAAPAEGPAGKSAAPAEPGLRGPAGDPPSPSRGTGPGVAPEEEQTGAEPSSPGGSPGVVRPKVPVQPRKSRKQRGTGGTEGDRDPAAAAAPGGTGAGKAPPGSPVAPRKGRGKDKAAKAALARAGSEEAAENKRALPGPGADGGDAGAAPPKPRGKEPGPQGPGKTKATKPPKAGQAAGLGVRDTVPAVPGDGAAAPPGEVSQEMPGKPLQPGNVAAFGGNAAEGAGGEPAAEIPGIAAAGIPGIAAPEIPGIAAAETSRKPSEIPGIAAAEIPGIAAAEIPGIAAAEMPRKSAAEIPRKSAFEIPRKPSETPEVPAAGIPWKPAAAIPRKPVPEIPWEPAAGIPRTPAAGIPKSPTLGIPWEPATGIPRIPAAEFPRIPAIEIPCEPAADIPTIPAAGIPRIPAIEIPRIPAAEIPRIPAIEIPCEPLGGIPAIPVPGIPTIPAVGIPTIPAVGIPTIPASRTPREAVAELPRAVSPLCFADGAPGKPSCLDVTWPEMYEYLFCDSQEEEELGSSLEGRKSPLQREISWPELYEYFFTEPEGGRKKGKAKDRKRRKFRGLERPGLHQEAPSSAPGKDTVLLSVPDVFERFLPQTAPSRMGWRGIFSTAPASEVKKAVRALSSLLQRQVQLGGDQASTSQALVPRRSGEELALVPLGGAQVWPEDADGALRAEDPRLLSHKDMCLVFCAFASWAVKTSDLQAPDAWKTMFLASFGTLSAIRYFRRQVREGHPRT
SIO_010081: PERM1
subclass of: SO_0000673
so part of: PERM1
location: join(260123..262733,263738..263848,264838..264917)
location: region:260123-264917:1
so has part: feature:260123-262733:1:exon
so has part: feature:263738-263848:1:exon
so has part: feature:264838-264917:1:exon

XP_041576349.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:260123-262733:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:263738-263848:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:264838-264917:1:exon

PLEKHN1
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: PLEKHN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(268584..285502)
location: region:268584-285502:-1
so has part: feature:268584-285502:-1:exon
subclass of: SO_0000010

101234114
type: Gene
SIO_000068: ncbigene

position:268584:-1
position: 268584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:285502:-1
position: 285502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:268584-285502:-1:exon

PLEKHN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: PLEKHN1
product: pleckstrin homology domain containing N1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030289387.3
SIO_010081: PLEKHN1
subclass of: SO_0000673
so part of: PLEKHN1
location: complement(join(268584..269979,270245..270293,270671..270868,272292..272522,273223..273417,273936..274093,274330..274399,276172..276252,276664..276813,277382..277506,278834..278921,280001..280081,280396..280542,283474..283573,285170..285502))
location: region:268584-285502:-1
so has part: feature:285170-285502:-1:exon
so has part: feature:283474-283573:-1:exon
so has part: feature:280396-280542:-1:exon
so has part: feature:280001-280081:-1:exon
so has part: feature:278834-278921:-1:exon
so has part: feature:277382-277506:-1:exon
so has part: feature:276664-276813:-1:exon
so has part: feature:276172-276252:-1:exon
so has part: feature:274330-274399:-1:exon
so has part: feature:273936-274093:-1:exon
so has part: feature:273223-273417:-1:exon
so has part: feature:272292-272522:-1:exon
so has part: feature:270671-270868:-1:exon
so has part: feature:270245-270293:-1:exon
so has part: feature:268584-269979:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:285170-285502:-1:exon

position:285170:-1
position: 285170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:283474-283573:-1:exon

position:283474:-1
position: 283474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:283573:-1
position: 283573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:280396-280542:-1:exon

position:280396:-1
position: 280396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:280542:-1
position: 280542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:280001-280081:-1:exon

position:280001:-1
position: 280001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:280081:-1
position: 280081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:278834-278921:-1:exon

position:278834:-1
position: 278834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:278921:-1
position: 278921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:277382-277506:-1:exon

position:277382:-1
position: 277382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:277506:-1
position: 277506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:276664-276813:-1:exon

position:276664:-1
position: 276664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:276813:-1
position: 276813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:276172-276252:-1:exon

position:276172:-1
position: 276172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:276252:-1
position: 276252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:274330-274399:-1:exon

position:274330:-1
position: 274330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:274399:-1
position: 274399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:273936-274093:-1:exon

position:273936:-1
position: 273936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:274093:-1
position: 274093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:273223-273417:-1:exon

position:273223:-1
position: 273223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:273417:-1
position: 273417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:272292-272522:-1:exon

position:272292:-1
position: 272292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:272522:-1
position: 272522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:270671-270868:-1:exon

position:270671:-1
position: 270671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:270868:-1
position: 270868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:270245-270293:-1:exon

position:270245:-1
position: 270245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:270293:-1
position: 270293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:268584-269979:-1:exon

position:269979:-1
position: 269979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PLEKHN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: PLEKHN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pleckstrin homology domain-containing family N member 1
translation: MGFPAAAAPRAGGSGMPAARGEFPGTGTWPAPPSPGAGARGRIGSGLCPHPLESRRAERSGRSDPAAIPQRSRSAPGMGNIACVPQAPGGFRSSFRRKASLKKEQNGKKKLPSFFGIDGGQERDTTTDKILQYIPAKIIQKQENQKENLDQRFPSLFRKGRRKTVVRNLGKMIYYSKVKFKFQHCQEVNSCFLELFQSYLYFQSTAPNGLTYQGLLPLKELEVRELGAGHSPGQQDHAFHISGPLLNPLVVFCPSEAELKQWLYHLEKQIQLCGGSLALPLLAQSGRTQSAGDKEGLRWSLQNLPVQDWRGTQRESLGEILCVSKVKLQHLPFQEQHDRLLVLYPSTLVIVSEEPGGLCFKGELPLNAIQVLFEENDKTSFLIEGRLINSIRVTCPSYQDYQEWLYCLKTAQFRNADSSLSGSESFSAGSKPPHPSQLPSSGRGSLSSDGRTNSWASAGRVTTLSQPCQASGSLPDGRPFLLGPQGRLLQEPLSPGYSQPLHSLAQPGWPTQELHRGNSARKSKGKSSGQQLPSQEPERGVCSLIPEGPAGETQCPLYHEPCAAPGPQQHPLAQRELGRFLQCHGQTGPAQGPVPGPQQLSLEQWHCQPLPGHCREVPTVPIYSTPGTSQHLRLRAPAQGSYLGEISALPQEHLSPELHPPDGTYDLPDGTCALADGSCSCSCQDSLSYHDYAELQSFQSDLSYDNLWEAEGKEPPHVFQV
SIO_010081: PLEKHN1
subclass of: SO_0000673
so part of: PLEKHN1
location: complement(join(269798..269979,270245..270293,270671..270868,272292..272522,273223..273417,273936..274093,274330..274399,276172..276252,276664..276813,277382..277506,278834..278921,280001..280081,280396..280542,283474..283573,285170..285480))
location: region:269798-285480:-1
so has part: feature:285170-285480:-1:exon
so has part: feature:283474-283573:-1:exon
so has part: feature:280396-280542:-1:exon
so has part: feature:280001-280081:-1:exon
so has part: feature:278834-278921:-1:exon
so has part: feature:277382-277506:-1:exon
so has part: feature:276664-276813:-1:exon
so has part: feature:276172-276252:-1:exon
so has part: feature:274330-274399:-1:exon
so has part: feature:273936-274093:-1:exon
so has part: feature:273223-273417:-1:exon
so has part: feature:272292-272522:-1:exon
so has part: feature:270671-270868:-1:exon
so has part: feature:270245-270293:-1:exon
so has part: feature:269798-269979:-1:exon

XP_030145247.3
type: Protein
SIO_000068: ncbiprotein

position:269798:-1
position: 269798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:285480:-1
position: 285480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:285170-285480:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:283474-283573:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:280396-280542:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:280001-280081:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:278834-278921:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:277382-277506:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:276664-276813:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:276172-276252:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:274330-274399:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:273936-274093:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:273223-273417:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:272292-272522:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:270671-270868:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:270245-270293:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:269798-269979:-1:exon

KLHL17
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: KLHL17
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(289652..308995)
location: region:289652-308995:-1
so has part: feature:289652-308995:-1:exon
subclass of: SO_0000010

100227028
type: Gene
SIO_000068: ncbigene

position:289652:-1
position: 289652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:308995:-1
position: 308995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:289652-308995:-1:exon

KLHL17
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: KLHL17
product: kelch like family member 17, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 37 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_002187618.5
SIO_010081: KLHL17
subclass of: SO_0000673
so part of: KLHL17
location: complement(join(289652..292893,293421..293602,294339..294412,295202..295290,295567..295734,296242..296386,297157..297370,297785..297901,298825..299046,299453..299574,300137..300390,308751..308995))
location: region:289652-308995:-1
so has part: feature:308751-308995:-1:exon
so has part: feature:300137-300390:-1:exon
so has part: feature:299453-299574:-1:exon
so has part: feature:298825-299046:-1:exon
so has part: feature:297785-297901:-1:exon
so has part: feature:297157-297370:-1:exon
so has part: feature:296242-296386:-1:exon
so has part: feature:295567-295734:-1:exon
so has part: feature:295202-295290:-1:exon
so has part: feature:294339-294412:-1:exon
so has part: feature:293421-293602:-1:exon
so has part: feature:289652-292893:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:308751-308995:-1:exon

position:308751:-1
position: 308751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:300137-300390:-1:exon

position:300137:-1
position: 300137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:300390:-1
position: 300390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:299453-299574:-1:exon

position:299453:-1
position: 299453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:299574:-1
position: 299574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:298825-299046:-1:exon

position:298825:-1
position: 298825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:299046:-1
position: 299046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:297785-297901:-1:exon

position:297785:-1
position: 297785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:297901:-1
position: 297901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:297157-297370:-1:exon

position:297157:-1
position: 297157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:297370:-1
position: 297370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:296242-296386:-1:exon

position:296242:-1
position: 296242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:296386:-1
position: 296386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:295567-295734:-1:exon

position:295567:-1
position: 295567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:295734:-1
position: 295734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:295202-295290:-1:exon

position:295202:-1
position: 295202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:295290:-1
position: 295290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:294339-294412:-1:exon

position:294339:-1
position: 294339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:294412:-1
position: 294412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:293421-293602:-1:exon

position:293421:-1
position: 293421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:293602:-1
position: 293602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:289652-292893:-1:exon

position:292893:-1
position: 292893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KLHL17
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: KLHL17
product: kelch like family member 17, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_030289594.3
SIO_010081: KLHL17
subclass of: SO_0000673
so part of: KLHL17
location: complement(join(289652..292893,293421..293602,294339..294412,295202..295290,295567..295734,296242..296386,297157..297370,297785..297901,298825..299046,299453..299574,300183..300260))
location: region:289652-300260:-1
so has part: feature:300183-300260:-1:exon
so has part: feature:299453-299574:-1:exon
so has part: feature:298825-299046:-1:exon
so has part: feature:297785-297901:-1:exon
so has part: feature:297157-297370:-1:exon
so has part: feature:296242-296386:-1:exon
so has part: feature:295567-295734:-1:exon
so has part: feature:295202-295290:-1:exon
so has part: feature:294339-294412:-1:exon
so has part: feature:293421-293602:-1:exon
so has part: feature:289652-292893:-1:exon

position:300260:-1
position: 300260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:300183-300260:-1:exon

position:300183:-1
position: 300183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:299453-299574:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:298825-299046:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:297785-297901:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:297157-297370:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:296242-296386:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:295567-295734:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:295202-295290:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:294339-294412:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:293421-293602:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:289652-292893:-1:exon

KLHL17
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: KLHL17
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kelch-like protein 17 isoform X2
translation: MEGGVQLLTRDGHSVSHNSKRHYHDAFVCMNRMRQRGLLCDIVLHVATKEIKAHKVVLASCSPYFHAMFTNEMSESRQTHVTLHDIDPQALEQLVQYAYTAEIVVGEGNVQTLLPAASLLQLNGVRDACCKFLLSQLDPSNCLGIRGFADTHSCSDLLKSAHKYVLQHFVEVSKTEEFMLLPLKQVLDLISSDSLNVPSEEEVYRAVLSWVKHDVDSRRQHVPRLMKCVRLPLLSRDFLMSNVDTELLVRHHSECKDLLIEALKYHLMPEQRGVLGNSRTRPRRCEGASTVLFAVGGGSLFAIHGDCEAYDTRTDRWHMVASMSTRRARVGVAAIGNKLYAVGGYDGTSDLATVESYDPVTNSWQPEVSMGTRRSCLGVAALHGLLYAAGGYDGASCLNSAERYDPLTGTWTSIAAMSTRRRYVRVATLEGNLYAVGGYDSSSHLATVEKYEPQINTWTPIANMLSRRSSAGVAVLEGMLYVAGGNDGTSCLNSVERYNPKSNTWESVAPMNIRRSTHDLVAMDGWLYAVGGNDGSSSLNSIEKYNPRTNKWVAASCMFTRRSSVGVAVLELLNFPPPSSPTLSVSSTSL
SIO_010081: KLHL17
subclass of: SO_0000673
so part of: KLHL17
location: complement(join(292665..292893,293421..293602,294339..294412,295202..295290,295567..295734,296242..296386,297157..297370,297785..297901,298825..299046,299453..299574,300137..300347))
location: region:292665-300347:-1
so has part: feature:300137-300347:-1:exon
so has part: feature:299453-299574:-1:exon
so has part: feature:298825-299046:-1:exon
so has part: feature:297785-297901:-1:exon
so has part: feature:297157-297370:-1:exon
so has part: feature:296242-296386:-1:exon
so has part: feature:295567-295734:-1:exon
so has part: feature:295202-295290:-1:exon
so has part: feature:294339-294412:-1:exon
so has part: feature:293421-293602:-1:exon
so has part: feature:292665-292893:-1:exon

XP_002187654.2
type: Protein
SIO_000068: ncbiprotein

position:292665:-1
position: 292665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:300347:-1
position: 300347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:300137-300347:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:299453-299574:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:298825-299046:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:297785-297901:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:297157-297370:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:296242-296386:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:295567-295734:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:295202-295290:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:294339-294412:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:293421-293602:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:292665-292893:-1:exon

KLHL17
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: KLHL17
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kelch-like protein 17 isoform X1
translation: MSESRQTHVTLHDIDPQALEQLVQYAYTAEIVVGEGNVQTLLPAASLLQLNGVRDACCKFLLSQLDPSNCLGIRGFADTHSCSDLLKSAHKYVLQHFVEVSKTEEFMLLPLKQVLDLISSDSLNVPSEEEVYRAVLSWVKHDVDSRRQHVPRLMKCVRLPLLSRDFLMSNVDTELLVRHHSECKDLLIEALKYHLMPEQRGVLGNSRTRPRRCEGASTVLFAVGGGSLFAIHGDCEAYDTRTDRWHMVASMSTRRARVGVAAIGNKLYAVGGYDGTSDLATVESYDPVTNSWQPEVSMGTRRSCLGVAALHGLLYAAGGYDGASCLNSAERYDPLTGTWTSIAAMSTRRRYVRVATLEGNLYAVGGYDSSSHLATVEKYEPQINTWTPIANMLSRRSSAGVAVLEGMLYVAGGNDGTSCLNSVERYNPKSNTWESVAPMNIRRSTHDLVAMDGWLYAVGGNDGSSSLNSIEKYNPRTNKWVAASCMFTRRSSVGVAVLELLNFPPPSSPTLSVSSTSL
SIO_010081: KLHL17
subclass of: SO_0000673
so part of: KLHL17
location: complement(join(292665..292893,293421..293602,294339..294412,295202..295290,295567..295734,296242..296386,297157..297370,297785..297901,298825..299046,299453..299569))
location: region:292665-299569:-1
so has part: feature:299453-299569:-1:exon
so has part: feature:298825-299046:-1:exon
so has part: feature:297785-297901:-1:exon
so has part: feature:297157-297370:-1:exon
so has part: feature:296242-296386:-1:exon
so has part: feature:295567-295734:-1:exon
so has part: feature:295202-295290:-1:exon
so has part: feature:294339-294412:-1:exon
so has part: feature:293421-293602:-1:exon
so has part: feature:292665-292893:-1:exon

XP_030145454.1
type: Protein
SIO_000068: ncbiprotein

position:299569:-1
position: 299569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:299453-299569:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:298825-299046:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:297785-297901:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:297157-297370:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:296242-296386:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:295567-295734:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:295202-295290:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:294339-294412:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:293421-293602:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:292665-292893:-1:exon

NOC2L
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: NOC2L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 310077..334248
location: region:310077-334248:1
so has part: feature:310077-334248:1:exon
subclass of: SO_0000010

100228976
type: Gene
SIO_000068: ncbigene

position:310077:1
position: 310077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:334248:1
position: 334248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:310077-334248:1:exon

NOC2L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: NOC2L
product: NOC2 like nucleolar associated transcriptional repressor, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 2 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_030289591.3
SIO_010081: NOC2L
subclass of: SO_0000673
so part of: NOC2L
location: join(310077..310159,310482..310679,311056..311227,311573..311692,312299..312416,312730..312820,313253..313331,314859..314969,315911..316024,317089..317277,318987..319126,321646..321757,324892..325005,325183..325284,328127..328270,328705..328818,331485..331620,332789..332920,333256..334248)
location: region:310077-334248:1
so has part: feature:310077-310159:1:exon
so has part: feature:310482-310679:1:exon
so has part: feature:311056-311227:1:exon
so has part: feature:311573-311692:1:exon
so has part: feature:312299-312416:1:exon
so has part: feature:312730-312820:1:exon
so has part: feature:313253-313331:1:exon
so has part: feature:314859-314969:1:exon
so has part: feature:315911-316024:1:exon
so has part: feature:317089-317277:1:exon
so has part: feature:318987-319126:1:exon
so has part: feature:321646-321757:1:exon
so has part: feature:324892-325005:1:exon
so has part: feature:325183-325284:1:exon
so has part: feature:328127-328270:1:exon
so has part: feature:328705-328818:1:exon
so has part: feature:331485-331620:1:exon
so has part: feature:332789-332920:1:exon
so has part: feature:333256-334248:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:310077-310159:1:exon

position:310159:1
position: 310159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:310482-310679:1:exon

position:310482:1
position: 310482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:310679:1
position: 310679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:311056-311227:1:exon

position:311056:1
position: 311056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:311227:1
position: 311227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:311573-311692:1:exon

position:311573:1
position: 311573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:311692:1
position: 311692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:312299-312416:1:exon

position:312299:1
position: 312299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:312416:1
position: 312416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:312730-312820:1:exon

position:312730:1
position: 312730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:312820:1
position: 312820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:313253-313331:1:exon

position:313253:1
position: 313253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:313331:1
position: 313331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:314859-314969:1:exon

position:314859:1
position: 314859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:314969:1
position: 314969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:315911-316024:1:exon

position:315911:1
position: 315911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:316024:1
position: 316024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:317089-317277:1:exon

position:317089:1
position: 317089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:317277:1
position: 317277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:318987-319126:1:exon

position:318987:1
position: 318987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:319126:1
position: 319126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:321646-321757:1:exon

position:321646:1
position: 321646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:321757:1
position: 321757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:324892-325005:1:exon

position:324892:1
position: 324892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:325005:1
position: 325005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:325183-325284:1:exon

position:325183:1
position: 325183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:325284:1
position: 325284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:328127-328270:1:exon

position:328127:1
position: 328127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:328270:1
position: 328270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:328705-328818:1:exon

position:328705:1
position: 328705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:328818:1
position: 328818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:331485-331620:1:exon

position:331485:1
position: 331485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:331620:1
position: 331620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:332789-332920:1:exon

position:332789:1
position: 332789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:332920:1
position: 332920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:333256-334248:1:exon

position:333256:1
position: 333256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NOC2L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: NOC2L
product: NOC2 like nucleolar associated transcriptional repressor, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 5 long SRA reads, 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 51 samples with support for all annotated introns
transcript id: XM_030289592.3
SIO_010081: NOC2L
subclass of: SO_0000673
so part of: NOC2L
location: join(310105..310159,310482..310679,311056..311227,311573..311692,312299..312416,312730..312820,313253..313331,314859..314969,315911..316024,317089..317277,318987..319126,321646..321757,324892..325005,325183..325284,328127..328270,328705..328818,331485..331620,332789..332920,333259..334248)
location: region:310105-334248:1
so has part: feature:310105-310159:1:exon
so has part: feature:310482-310679:1:exon
so has part: feature:311056-311227:1:exon
so has part: feature:311573-311692:1:exon
so has part: feature:312299-312416:1:exon
so has part: feature:312730-312820:1:exon
so has part: feature:313253-313331:1:exon
so has part: feature:314859-314969:1:exon
so has part: feature:315911-316024:1:exon
so has part: feature:317089-317277:1:exon
so has part: feature:318987-319126:1:exon
so has part: feature:321646-321757:1:exon
so has part: feature:324892-325005:1:exon
so has part: feature:325183-325284:1:exon
so has part: feature:328127-328270:1:exon
so has part: feature:328705-328818:1:exon
so has part: feature:331485-331620:1:exon
so has part: feature:332789-332920:1:exon
so has part: feature:333259-334248:1:exon

position:310105:1
position: 310105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:310105-310159:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:310482-310679:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:311056-311227:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:311573-311692:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:312299-312416:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:312730-312820:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:313253-313331:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:314859-314969:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:315911-316024:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:317089-317277:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:318987-319126:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:321646-321757:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:324892-325005:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:325183-325284:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:328127-328270:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:328705-328818:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:331485-331620:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:332789-332920:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:333259-334248:1:exon

position:333259:1
position: 333259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NOC2L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: NOC2L
product: NOC2 like nucleolar associated transcriptional repressor, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 1 long SRA read, 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 51 samples with support for all annotated introns
transcript id: XM_030289593.3
SIO_010081: NOC2L
subclass of: SO_0000673
so part of: NOC2L
location: join(310110..310159,310482..310679,311059..311227,311573..311692,312299..312416,312730..312820,313253..313331,314859..314969,315911..316024,317089..317277,318987..319126,321646..321757,324892..325005,325183..325284,328127..328270,328705..328818,331485..331620,332789..332920,333259..334248)
location: region:310110-334248:1
so has part: feature:310110-310159:1:exon
so has part: feature:310482-310679:1:exon
so has part: feature:311059-311227:1:exon
so has part: feature:311573-311692:1:exon
so has part: feature:312299-312416:1:exon
so has part: feature:312730-312820:1:exon
so has part: feature:313253-313331:1:exon
so has part: feature:314859-314969:1:exon
so has part: feature:315911-316024:1:exon
so has part: feature:317089-317277:1:exon
so has part: feature:318987-319126:1:exon
so has part: feature:321646-321757:1:exon
so has part: feature:324892-325005:1:exon
so has part: feature:325183-325284:1:exon
so has part: feature:328127-328270:1:exon
so has part: feature:328705-328818:1:exon
so has part: feature:331485-331620:1:exon
so has part: feature:332789-332920:1:exon
so has part: feature:333259-334248:1:exon

position:310110:1
position: 310110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:310110-310159:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:310482-310679:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:311059-311227:1:exon

position:311059:1
position: 311059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:311573-311692:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:312299-312416:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:312730-312820:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:313253-313331:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:314859-314969:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:315911-316024:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:317089-317277:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:318987-319126:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:321646-321757:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:324892-325005:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:325183-325284:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:328127-328270:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:328705-328818:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:331485-331620:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:332789-332920:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:333259-334248:1:exon

NOC2L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: NOC2L
product: NOC2 like nucleolar associated transcriptional repressor, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 1 long SRA read, 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_012570439.4
SIO_010081: NOC2L
subclass of: SO_0000673
so part of: NOC2L
location: join(310125..310159,310482..310679,311059..311227,311573..311692,312299..312416,312730..312820,313253..313331,314859..314969,315911..316024,317089..317277,318987..319126,321646..321757,324892..325005,325183..325284,328127..328270,328705..328818,331485..331620,332789..332920,333256..334248)
location: region:310125-334248:1
so has part: feature:310125-310159:1:exon
so has part: feature:310482-310679:1:exon
so has part: feature:311059-311227:1:exon
so has part: feature:311573-311692:1:exon
so has part: feature:312299-312416:1:exon
so has part: feature:312730-312820:1:exon
so has part: feature:313253-313331:1:exon
so has part: feature:314859-314969:1:exon
so has part: feature:315911-316024:1:exon
so has part: feature:317089-317277:1:exon
so has part: feature:318987-319126:1:exon
so has part: feature:321646-321757:1:exon
so has part: feature:324892-325005:1:exon
so has part: feature:325183-325284:1:exon
so has part: feature:328127-328270:1:exon
so has part: feature:328705-328818:1:exon
so has part: feature:331485-331620:1:exon
so has part: feature:332789-332920:1:exon
so has part: feature:333256-334248:1:exon

position:310125:1
position: 310125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:310125-310159:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:310482-310679:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:311059-311227:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:311573-311692:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:312299-312416:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:312730-312820:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:313253-313331:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:314859-314969:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:315911-316024:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:317089-317277:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:318987-319126:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:321646-321757:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:324892-325005:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:325183-325284:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:328127-328270:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:328705-328818:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:331485-331620:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:332789-332920:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:333256-334248:1:exon

NOC2L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: NOC2L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleolar complex protein 2 homolog isoform X1
translation: MAAPGRRKLAERRKLAELSVDEFLAAGSDSEHDGAWEEEEEEKEEGSRALNGTARQRRPSGKAALGLQARPGSRKKGKVSEHKDQLSRLKDRDPEFYKFLEENDRKLLDFDASDSSEEEEALHRPPDTLEEASDEDEDDEDEEQEKVKRKKISFIPVSLKMVEEWKKAAQRSLTPKLFHDITQAYKAAVATTRGDSGGDPSKFQVTDTAVFNALVSFCIRDLFHHLHKLLLPKAPKNKLKMVLPSTSPLWGKLRLDIKVYLGCTIQLLACLTEASVGAAVLQHVNCTVPYYLSFPKQCRALLKQTITLWSTGEETVRVLAFLVLNKICRYKKEVYLSPLIKQMYIAFVKNSRFTSPNVLPMINFMQRTLTEVLALDSPSSYQHSFIYIRQLAIHLRSAMTLRKKENFQSVYNWQYIHCLYFWCRVLSTIHPSEVMEPLIYPLTQVIIGCIKLVPTSRFYPLRMHCIRALTLLSQSTRTFIPVLPFILEVFQQVDFNKKPGRMSSKPINFAVILKLSNANLQEKAFRDGLIDQLYDLLLEYLHGQAHSIGFPELVLPTVIQLKSFLKECKVANYCRPMRQLLEKLQENSAHICSRRQRVAFGVASTAAVEQWEKQVKEEGTPLSKYYTQWKKLREKEIQLEISGKERLEDLNFPEIKRRKQNERKEEDKKEFKDLFELDSDSEEESGGFSVKGTGRASDDSSEGSEEFGEEEEDGEGKYEVEEEDEEELEEDSESEAEEAARDSRESRSCPRGLSRSDLEQLAQGGEDLVQDLEVSDED
SIO_010081: NOC2L
subclass of: SO_0000673
so part of: NOC2L
location: join(310140..310159,310482..310679,311056..311227,311573..311692,312299..312416,312730..312820,313253..313331,314859..314969,315911..316024,317089..317277,318987..319126,321646..321757,324892..325005,325183..325284,328127..328270,328705..328818,331485..331620,332789..332920,333256..333386)
location: region:310140-333386:1
so has part: feature:310140-310159:1:exon
so has part: feature:310482-310679:1:exon
so has part: feature:311056-311227:1:exon
so has part: feature:311573-311692:1:exon
so has part: feature:312299-312416:1:exon
so has part: feature:312730-312820:1:exon
so has part: feature:313253-313331:1:exon
so has part: feature:314859-314969:1:exon
so has part: feature:315911-316024:1:exon
so has part: feature:317089-317277:1:exon
so has part: feature:318987-319126:1:exon
so has part: feature:321646-321757:1:exon
so has part: feature:324892-325005:1:exon
so has part: feature:325183-325284:1:exon
so has part: feature:328127-328270:1:exon
so has part: feature:328705-328818:1:exon
so has part: feature:331485-331620:1:exon
so has part: feature:332789-332920:1:exon
so has part: feature:333256-333386:1:exon

XP_030145451.3
type: Protein
SIO_000068: ncbiprotein

position:310140:1
position: 310140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:333386:1
position: 333386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:310140-310159:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:310482-310679:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:311056-311227:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:311573-311692:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:312299-312416:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:312730-312820:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:313253-313331:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:314859-314969:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:315911-316024:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:317089-317277:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:318987-319126:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:321646-321757:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:324892-325005:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:325183-325284:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:328127-328270:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:328705-328818:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:331485-331620:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:332789-332920:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:333256-333386:1:exon

NOC2L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: NOC2L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleolar complex protein 2 homolog isoform X2
translation: MAAPGRRKLAERRKLAELSVDEFLAAGSDSEHDGAWEEEEEEKEEGSRALNGTARQRRPSGKAALGLQARPGSRKKGKVSEHKDQLSRLKDRDPEFYKFLEENDRKLLDFDASDSSEEEEALHRPPDTLEEASDEDEDDEDEEQEKVKRKKISFIPVSLKMVEEWKKAAQRSLTPKLFHDITQAYKAAVATTRGDSGGDPSKFQVTDTAVFNALVSFCIRDLFHHLHKLLLPKAPKNKLKMVLPSTSPLWGKLRLDIKVYLGCTIQLLACLTEASVGAAVLQHVNCTVPYYLSFPKQCRALLKQTITLWSTGEETVRVLAFLVLNKICRYKKEVYLSPLIKQMYIAFVKNSRFTSPNVLPMINFMQRTLTEVLALDSPSSYQHSFIYIRQLAIHLRSAMTLRKKENFQSVYNWQYIHCLYFWCRVLSTIHPSEVMEPLIYPLTQVIIGCIKLVPTSRFYPLRMHCIRALTLLSQSTRTFIPVLPFILEVFQQVDFNKKPGRMSSKPINFAVILKLSNANLQEKAFRDGLIDQLYDLLLEYLHGQAHSIGFPELVLPTVIQLKSFLKECKVANYCRPMRQLLEKLQENSAHICSRRQRVAFGVASTAAVEQWEKQVKEEGTPLSKYYTQWKKLREKEIQLEISGKERLEDLNFPEIKRRKQNERKEEDKKEFKDLFELDSDSEEESGGFSVKGTGRASDDSSEGSEEFGEEEEDGEGKYEVEEEDEEELEEDSESEEEAARDSRESRSCPRGLSRSDLEQLAQGGEDLVQDLEVSDED
SIO_010081: NOC2L
subclass of: SO_0000673
so part of: NOC2L
location: join(310140..310159,310482..310679,311056..311227,311573..311692,312299..312416,312730..312820,313253..313331,314859..314969,315911..316024,317089..317277,318987..319126,321646..321757,324892..325005,325183..325284,328127..328270,328705..328818,331485..331620,332789..332920,333259..333386)
location: region:310140-333386:1
so has part: feature:310140-310159:1:exon
so has part: feature:310482-310679:1:exon
so has part: feature:311056-311227:1:exon
so has part: feature:311573-311692:1:exon
so has part: feature:312299-312416:1:exon
so has part: feature:312730-312820:1:exon
so has part: feature:313253-313331:1:exon
so has part: feature:314859-314969:1:exon
so has part: feature:315911-316024:1:exon
so has part: feature:317089-317277:1:exon
so has part: feature:318987-319126:1:exon
so has part: feature:321646-321757:1:exon
so has part: feature:324892-325005:1:exon
so has part: feature:325183-325284:1:exon
so has part: feature:328127-328270:1:exon
so has part: feature:328705-328818:1:exon
so has part: feature:331485-331620:1:exon
so has part: feature:332789-332920:1:exon
so has part: feature:333259-333386:1:exon

XP_030145452.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:310140-310159:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:310482-310679:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:311056-311227:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:311573-311692:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:312299-312416:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:312730-312820:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:313253-313331:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:314859-314969:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:315911-316024:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:317089-317277:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:318987-319126:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:321646-321757:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:324892-325005:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:325183-325284:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:328127-328270:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:328705-328818:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:331485-331620:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:332789-332920:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:333259-333386:1:exon

NOC2L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: NOC2L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleolar complex protein 2 homolog isoform X3
translation: MAAPGRRKLAERRKLAELSVDEFLAAGSDSEHDGAWEEEEEEKEEGSRALNGTARQRRPSGKAALGLQARPGRKKGKVSEHKDQLSRLKDRDPEFYKFLEENDRKLLDFDASDSSEEEEALHRPPDTLEEASDEDEDDEDEEQEKVKRKKISFIPVSLKMVEEWKKAAQRSLTPKLFHDITQAYKAAVATTRGDSGGDPSKFQVTDTAVFNALVSFCIRDLFHHLHKLLLPKAPKNKLKMVLPSTSPLWGKLRLDIKVYLGCTIQLLACLTEASVGAAVLQHVNCTVPYYLSFPKQCRALLKQTITLWSTGEETVRVLAFLVLNKICRYKKEVYLSPLIKQMYIAFVKNSRFTSPNVLPMINFMQRTLTEVLALDSPSSYQHSFIYIRQLAIHLRSAMTLRKKENFQSVYNWQYIHCLYFWCRVLSTIHPSEVMEPLIYPLTQVIIGCIKLVPTSRFYPLRMHCIRALTLLSQSTRTFIPVLPFILEVFQQVDFNKKPGRMSSKPINFAVILKLSNANLQEKAFRDGLIDQLYDLLLEYLHGQAHSIGFPELVLPTVIQLKSFLKECKVANYCRPMRQLLEKLQENSAHICSRRQRVAFGVASTAAVEQWEKQVKEEGTPLSKYYTQWKKLREKEIQLEISGKERLEDLNFPEIKRRKQNERKEEDKKEFKDLFELDSDSEEESGGFSVKGTGRASDDSSEGSEEFGEEEEDGEGKYEVEEEDEEELEEDSESEAEEAARDSRESRSCPRGLSRSDLEQLAQGGEDLVQDLEVSDED
SIO_010081: NOC2L
subclass of: SO_0000673
so part of: NOC2L
location: join(310140..310159,310482..310679,311059..311227,311573..311692,312299..312416,312730..312820,313253..313331,314859..314969,315911..316024,317089..317277,318987..319126,321646..321757,324892..325005,325183..325284,328127..328270,328705..328818,331485..331620,332789..332920,333256..333386)
location: region:310140-333386:1
so has part: feature:310140-310159:1:exon
so has part: feature:310482-310679:1:exon
so has part: feature:311059-311227:1:exon
so has part: feature:311573-311692:1:exon
so has part: feature:312299-312416:1:exon
so has part: feature:312730-312820:1:exon
so has part: feature:313253-313331:1:exon
so has part: feature:314859-314969:1:exon
so has part: feature:315911-316024:1:exon
so has part: feature:317089-317277:1:exon
so has part: feature:318987-319126:1:exon
so has part: feature:321646-321757:1:exon
so has part: feature:324892-325005:1:exon
so has part: feature:325183-325284:1:exon
so has part: feature:328127-328270:1:exon
so has part: feature:328705-328818:1:exon
so has part: feature:331485-331620:1:exon
so has part: feature:332789-332920:1:exon
so has part: feature:333256-333386:1:exon

XP_012425893.4
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:310140-310159:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:310482-310679:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:311059-311227:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:311573-311692:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:312299-312416:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:312730-312820:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:313253-313331:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:314859-314969:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:315911-316024:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:317089-317277:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:318987-319126:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:321646-321757:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:324892-325005:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:325183-325284:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:328127-328270:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:328705-328818:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:331485-331620:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:332789-332920:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:333256-333386:1:exon

NOC2L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: NOC2L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleolar complex protein 2 homolog isoform X4
translation: MAAPGRRKLAERRKLAELSVDEFLAAGSDSEHDGAWEEEEEEKEEGSRALNGTARQRRPSGKAALGLQARPGRKKGKVSEHKDQLSRLKDRDPEFYKFLEENDRKLLDFDASDSSEEEEALHRPPDTLEEASDEDEDDEDEEQEKVKRKKISFIPVSLKMVEEWKKAAQRSLTPKLFHDITQAYKAAVATTRGDSGGDPSKFQVTDTAVFNALVSFCIRDLFHHLHKLLLPKAPKNKLKMVLPSTSPLWGKLRLDIKVYLGCTIQLLACLTEASVGAAVLQHVNCTVPYYLSFPKQCRALLKQTITLWSTGEETVRVLAFLVLNKICRYKKEVYLSPLIKQMYIAFVKNSRFTSPNVLPMINFMQRTLTEVLALDSPSSYQHSFIYIRQLAIHLRSAMTLRKKENFQSVYNWQYIHCLYFWCRVLSTIHPSEVMEPLIYPLTQVIIGCIKLVPTSRFYPLRMHCIRALTLLSQSTRTFIPVLPFILEVFQQVDFNKKPGRMSSKPINFAVILKLSNANLQEKAFRDGLIDQLYDLLLEYLHGQAHSIGFPELVLPTVIQLKSFLKECKVANYCRPMRQLLEKLQENSAHICSRRQRVAFGVASTAAVEQWEKQVKEEGTPLSKYYTQWKKLREKEIQLEISGKERLEDLNFPEIKRRKQNERKEEDKKEFKDLFELDSDSEEESGGFSVKGTGRASDDSSEGSEEFGEEEEDGEGKYEVEEEDEEELEEDSESEEEAARDSRESRSCPRGLSRSDLEQLAQGGEDLVQDLEVSDED
SIO_010081: NOC2L
subclass of: SO_0000673
so part of: NOC2L
location: join(310140..310159,310482..310679,311059..311227,311573..311692,312299..312416,312730..312820,313253..313331,314859..314969,315911..316024,317089..317277,318987..319126,321646..321757,324892..325005,325183..325284,328127..328270,328705..328818,331485..331620,332789..332920,333259..333386)
location: region:310140-333386:1
so has part: feature:310140-310159:1:exon
so has part: feature:310482-310679:1:exon
so has part: feature:311059-311227:1:exon
so has part: feature:311573-311692:1:exon
so has part: feature:312299-312416:1:exon
so has part: feature:312730-312820:1:exon
so has part: feature:313253-313331:1:exon
so has part: feature:314859-314969:1:exon
so has part: feature:315911-316024:1:exon
so has part: feature:317089-317277:1:exon
so has part: feature:318987-319126:1:exon
so has part: feature:321646-321757:1:exon
so has part: feature:324892-325005:1:exon
so has part: feature:325183-325284:1:exon
so has part: feature:328127-328270:1:exon
so has part: feature:328705-328818:1:exon
so has part: feature:331485-331620:1:exon
so has part: feature:332789-332920:1:exon
so has part: feature:333259-333386:1:exon

XP_030145453.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:310140-310159:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:310482-310679:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:311059-311227:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:311573-311692:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:312299-312416:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:312730-312820:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:313253-313331:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:314859-314969:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:315911-316024:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:317089-317277:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:318987-319126:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:321646-321757:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:324892-325005:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:325183-325284:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:328127-328270:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:328705-328818:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:331485-331620:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:332789-332920:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:333259-333386:1:exon

SAMD11
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: SAMD11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(334132..410797)
location: region:334132-410797:-1
so has part: feature:334132-410797:-1:exon
subclass of: SO_0000010

100229826
type: Gene
SIO_000068: ncbigene

position:334132:-1
position: 334132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:410797:-1
position: 410797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:334132-410797:-1:exon

SAMD11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: SAMD11
product: sterile alpha motif domain containing 11, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_030289587.3
SIO_010081: SAMD11
subclass of: SO_0000673
so part of: SAMD11
location: complement(join(334132..335448,336913..337023,337824..337948,341596..342287,342422..342500,342828..342943,349257..349404,353644..353805,360034..360126,371586..371710,381006..381056,384331..384509,403166..403257,404408..405210,410653..410797))
location: region:334132-410797:-1
so has part: feature:410653-410797:-1:exon
so has part: feature:404408-405210:-1:exon
so has part: feature:403166-403257:-1:exon
so has part: feature:384331-384509:-1:exon
so has part: feature:381006-381056:-1:exon
so has part: feature:371586-371710:-1:exon
so has part: feature:360034-360126:-1:exon
so has part: feature:353644-353805:-1:exon
so has part: feature:349257-349404:-1:exon
so has part: feature:342828-342943:-1:exon
so has part: feature:342422-342500:-1:exon
so has part: feature:341596-342287:-1:exon
so has part: feature:337824-337948:-1:exon
so has part: feature:336913-337023:-1:exon
so has part: feature:334132-335448:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:410653-410797:-1:exon

position:410653:-1
position: 410653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:404408-405210:-1:exon

position:404408:-1
position: 404408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:405210:-1
position: 405210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:403166-403257:-1:exon

position:403166:-1
position: 403166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:403257:-1
position: 403257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:384331-384509:-1:exon

position:384331:-1
position: 384331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:384509:-1
position: 384509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:381006-381056:-1:exon

position:381006:-1
position: 381006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:381056:-1
position: 381056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:371586-371710:-1:exon

position:371586:-1
position: 371586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:371710:-1
position: 371710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:360034-360126:-1:exon

position:360034:-1
position: 360034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:360126:-1
position: 360126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:353644-353805:-1:exon

position:353644:-1
position: 353644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:353805:-1
position: 353805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:349257-349404:-1:exon

position:349257:-1
position: 349257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:349404:-1
position: 349404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:342828-342943:-1:exon

position:342828:-1
position: 342828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:342943:-1
position: 342943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:342422-342500:-1:exon

position:342422:-1
position: 342422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:342500:-1
position: 342500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:341596-342287:-1:exon

position:341596:-1
position: 341596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:342287:-1
position: 342287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:337824-337948:-1:exon

position:337824:-1
position: 337824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:337948:-1
position: 337948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:336913-337023:-1:exon

position:336913:-1
position: 336913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:337023:-1
position: 337023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:334132-335448:-1:exon

position:335448:-1
position: 335448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SAMD11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: SAMD11
product: sterile alpha motif domain containing 11, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_030289589.3
SIO_010081: SAMD11
subclass of: SO_0000673
so part of: SAMD11
location: complement(join(334132..335448,336913..337023,337824..337948,341596..342287,342422..342500,342828..342943,349257..349404,353644..353805,360034..360126,371586..371710,381006..381056,384331..384509,403217..403257,404408..405264))
location: region:334132-405264:-1
so has part: feature:404408-405264:-1:exon
so has part: feature:403217-403257:-1:exon
so has part: feature:384331-384509:-1:exon
so has part: feature:381006-381056:-1:exon
so has part: feature:371586-371710:-1:exon
so has part: feature:360034-360126:-1:exon
so has part: feature:353644-353805:-1:exon
so has part: feature:349257-349404:-1:exon
so has part: feature:342828-342943:-1:exon
so has part: feature:342422-342500:-1:exon
so has part: feature:341596-342287:-1:exon
so has part: feature:337824-337948:-1:exon
so has part: feature:336913-337023:-1:exon
so has part: feature:334132-335448:-1:exon

position:405264:-1
position: 405264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:404408-405264:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:403217-403257:-1:exon

position:403217:-1
position: 403217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:384331-384509:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:381006-381056:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:371586-371710:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:360034-360126:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:353644-353805:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:349257-349404:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:342828-342943:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:342422-342500:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:341596-342287:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:337824-337948:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:336913-337023:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:334132-335448:-1:exon

SAMD11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: SAMD11
product: sterile alpha motif domain containing 11, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_041720311.1
SIO_010081: SAMD11
subclass of: SO_0000673
so part of: SAMD11
location: complement(join(334132..335448,336913..337023,337824..337948,341596..342287,342422..342500,342828..342943,349257..349404,353644..353805,360034..360126,371586..371710,381006..381056,384331..384509,403166..403257,404408..405264))
location: region:334132-405264:-1
so has part: feature:404408-405264:-1:exon
so has part: feature:403166-403257:-1:exon
so has part: feature:384331-384509:-1:exon
so has part: feature:381006-381056:-1:exon
so has part: feature:371586-371710:-1:exon
so has part: feature:360034-360126:-1:exon
so has part: feature:353644-353805:-1:exon
so has part: feature:349257-349404:-1:exon
so has part: feature:342828-342943:-1:exon
so has part: feature:342422-342500:-1:exon
so has part: feature:341596-342287:-1:exon
so has part: feature:337824-337948:-1:exon
so has part: feature:336913-337023:-1:exon
so has part: feature:334132-335448:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:404408-405264:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:403166-403257:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:384331-384509:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:381006-381056:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:371586-371710:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:360034-360126:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:353644-353805:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:349257-349404:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:342828-342943:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:342422-342500:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:341596-342287:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:337824-337948:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:336913-337023:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:334132-335448:-1:exon

SAMD11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: SAMD11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sterile alpha motif domain-containing protein 11 isoform X2
translation: MSGISPEGQICEAHSSSRVYGTLGSPWERDPRQLCWGASPGDLLAGCSGGYQPPPAPERQRCLCCCCCCCWRISAKLQPEPGQLEPETLEPLCFGETRAHGERGGTMPAIKKERLDREEMALAAFNQPMETLPDYLAPLAAAAIPVVTPHPPAYDQIFAHRAYLGFHEPHHPHPHHPHHLPEDLMLERFSSIPDFQPFFDNGEPCIEVECGENKALLYINKLCQGSKGPSIRYRGEWLTPNEFQFVSGRETAKDWKRSIRHKGKSLKTLMSKGILQNRGRLAEKRSIPLPPSRVPKKELSSIFSHSEDSQESDKSNGQQPEVKQEEDLHISIMKRRIHTHWDLNISFRETSCSRDSDLSTIISNLHQSRQLVMPESQSRCEFKRNPLDVGLAAADEILGKRRVCSPNSSSECPLESKKARSESPKETSQTPLLEEVAQMTPEEHYRRMMSALNEHGAFEEQQQQRLFQLANSMAVPSHGDLLRARQEAAAAAARTPGAMEAHIPSASNSSSQRRKQGLPQHRDSHFPDREISHPPPLLSPQNAPHIALGPHLRPPFLGVPSALCQTPGYGFLQPAQAEMFARQQEMLRKQNLARLEMSAELIRQKELENLHRQRLLAADPLSLHPGLPPDHPALRSVHDGAEGHALRDELSRRNAMLVLRHSNAPLLSLTPGGPATPPKEQPRRAGRKAPQPRAEPPGPGETREPRVRDGAQDCNDEEMKDSESDAEPGEDKAEGAKAEGGSAAELKECKDGAAGKACEAAKELGEAAAAPGVPCSSSSAESPSHLLGPGVGKAEVKYLPPASLPAPQPLPFGFPYTVSPYFHAGTMGGLFLDGEESPALEDISKWTVEDVCSFVSNLSGCTEYTQVFREQAIDGETLPLLTEEHLLNNMGLKLGPALKIRSQVARRLGRVLCMAGLPLALPLQPPGLRPPERDTAPELRPASTGSVASPFGSAVPASRGSPKQQENGSAALLGDTPKAPC
SIO_010081: SAMD11
subclass of: SO_0000673
so part of: SAMD11
location: complement(join(335212..335448,336913..337023,337824..337948,341596..342287,342422..342500,342828..342943,349257..349404,353644..353805,360034..360126,371586..371710,381006..381056,384331..384509,403217..403257,404408..405194))
location: region:335212-405194:-1
so has part: feature:404408-405194:-1:exon
so has part: feature:403217-403257:-1:exon
so has part: feature:384331-384509:-1:exon
so has part: feature:381006-381056:-1:exon
so has part: feature:371586-371710:-1:exon
so has part: feature:360034-360126:-1:exon
so has part: feature:353644-353805:-1:exon
so has part: feature:349257-349404:-1:exon
so has part: feature:342828-342943:-1:exon
so has part: feature:342422-342500:-1:exon
so has part: feature:341596-342287:-1:exon
so has part: feature:337824-337948:-1:exon
so has part: feature:336913-337023:-1:exon
so has part: feature:335212-335448:-1:exon

XP_030145449.3
type: Protein
SIO_000068: ncbiprotein

position:335212:-1
position: 335212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:405194:-1
position: 405194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:404408-405194:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:403217-403257:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:384331-384509:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:381006-381056:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:371586-371710:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:360034-360126:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:353644-353805:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:349257-349404:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:342828-342943:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:342422-342500:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:341596-342287:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:337824-337948:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:336913-337023:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:335212-335448:-1:exon

SAMD11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: SAMD11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sterile alpha motif domain-containing protein 11 isoform X1
translation: MSGISPEGQICEAHSSSRVYGTLGSPWERDPRQLCWGASPGDLLAGCSGGYQPPPAPERQRCLCCCCCCCWRISAKLQPEPGQLEPETLEPLCFGETRAHGERGGTMPAIKKERLDREEMALAAFNQPMETLPDYLAPLAAAAIPVVTPHPPAYDQIFAHRAYLGFHEPHHPHPHHPHHLPEDLMLERFSSIPDFQPFFDNGEPCIEVECGENKALLYINKLCQGSKGPSIRYRGEWLTPNEFQFVSGRETAKDWKRSIRHKGKSLKTLMSKGILQVHPPICDCPGCRISSPVNRGRLAEKRSIPLPPSRVPKKELSSIFSHSEDSQESDKSNGQQPEVKQEEDLHISIMKRRIHTHWDLNISFRETSCSRDSDLSTIISNLHQSRQLVMPESQSRCEFKRNPLDVGLAAADEILGKRRVCSPNSSSECPLESKKARSESPKETSQTPLLEEVAQMTPEEHYRRMMSALNEHGAFEEQQQQRLFQLANSMAVPSHGDLLRARQEAAAAAARTPGAMEAHIPSASNSSSQRRKQGLPQHRDSHFPDREISHPPPLLSPQNAPHIALGPHLRPPFLGVPSALCQTPGYGFLQPAQAEMFARQQEMLRKQNLARLEMSAELIRQKELENLHRQRLLAADPLSLHPGLPPDHPALRSVHDGAEGHALRDELSRRNAMLVLRHSNAPLLSLTPGGPATPPKEQPRRAGRKAPQPRAEPPGPGETREPRVRDGAQDCNDEEMKDSESDAEPGEDKAEGAKAEGGSAAELKECKDGAAGKACEAAKELGEAAAAPGVPCSSSSAESPSHLLGPGVGKAEVKYLPPASLPAPQPLPFGFPYTVSPYFHAGTMGGLFLDGEESPALEDISKWTVEDVCSFVSNLSGCTEYTQVFREQAIDGETLPLLTEEHLLNNMGLKLGPALKIRSQVARRLGRVLCMAGLPLALPLQPPGLRPPERDTAPELRPASTGSVASPFGSAVPASRGSPKQQENGSAALLGDTPKAPC
SIO_010081: SAMD11
subclass of: SO_0000673
so part of: SAMD11
location: complement(join(335212..335448,336913..337023,337824..337948,341596..342287,342422..342500,342828..342943,349257..349404,353644..353805,360034..360126,371586..371710,381006..381056,384331..384509,403166..403257,404408..405194))
location: region:335212-405194:-1
so has part: feature:404408-405194:-1:exon
so has part: feature:403166-403257:-1:exon
so has part: feature:384331-384509:-1:exon
so has part: feature:381006-381056:-1:exon
so has part: feature:371586-371710:-1:exon
so has part: feature:360034-360126:-1:exon
so has part: feature:353644-353805:-1:exon
so has part: feature:349257-349404:-1:exon
so has part: feature:342828-342943:-1:exon
so has part: feature:342422-342500:-1:exon
so has part: feature:341596-342287:-1:exon
so has part: feature:337824-337948:-1:exon
so has part: feature:336913-337023:-1:exon
so has part: feature:335212-335448:-1:exon

XP_041576245.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:404408-405194:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:403166-403257:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:384331-384509:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:381006-381056:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:371586-371710:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:360034-360126:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:353644-353805:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:349257-349404:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:342828-342943:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:342422-342500:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:341596-342287:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:337824-337948:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:336913-337023:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:335212-335448:-1:exon

SAMD11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: SAMD11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sterile alpha motif domain-containing protein 11 isoform X1
translation: MSGISPEGQICEAHSSSRVYGTLGSPWERDPRQLCWGASPGDLLAGCSGGYQPPPAPERQRCLCCCCCCCWRISAKLQPEPGQLEPETLEPLCFGETRAHGERGGTMPAIKKERLDREEMALAAFNQPMETLPDYLAPLAAAAIPVVTPHPPAYDQIFAHRAYLGFHEPHHPHPHHPHHLPEDLMLERFSSIPDFQPFFDNGEPCIEVECGENKALLYINKLCQGSKGPSIRYRGEWLTPNEFQFVSGRETAKDWKRSIRHKGKSLKTLMSKGILQVHPPICDCPGCRISSPVNRGRLAEKRSIPLPPSRVPKKELSSIFSHSEDSQESDKSNGQQPEVKQEEDLHISIMKRRIHTHWDLNISFRETSCSRDSDLSTIISNLHQSRQLVMPESQSRCEFKRNPLDVGLAAADEILGKRRVCSPNSSSECPLESKKARSESPKETSQTPLLEEVAQMTPEEHYRRMMSALNEHGAFEEQQQQRLFQLANSMAVPSHGDLLRARQEAAAAAARTPGAMEAHIPSASNSSSQRRKQGLPQHRDSHFPDREISHPPPLLSPQNAPHIALGPHLRPPFLGVPSALCQTPGYGFLQPAQAEMFARQQEMLRKQNLARLEMSAELIRQKELENLHRQRLLAADPLSLHPGLPPDHPALRSVHDGAEGHALRDELSRRNAMLVLRHSNAPLLSLTPGGPATPPKEQPRRAGRKAPQPRAEPPGPGETREPRVRDGAQDCNDEEMKDSESDAEPGEDKAEGAKAEGGSAAELKECKDGAAGKACEAAKELGEAAAAPGVPCSSSSAESPSHLLGPGVGKAEVKYLPPASLPAPQPLPFGFPYTVSPYFHAGTMGGLFLDGEESPALEDISKWTVEDVCSFVSNLSGCTEYTQVFREQAIDGETLPLLTEEHLLNNMGLKLGPALKIRSQVARRLGRVLCMAGLPLALPLQPPGLRPPERDTAPELRPASTGSVASPFGSAVPASRGSPKQQENGSAALLGDTPKAPC
SIO_010081: SAMD11
subclass of: SO_0000673
so part of: SAMD11
location: complement(join(335212..335448,336913..337023,337824..337948,341596..342287,342422..342500,342828..342943,349257..349404,353644..353805,360034..360126,371586..371710,381006..381056,384331..384509,403166..403257,404408..405194))
location: region:335212-405194:-1
so has part: feature:404408-405194:-1:exon
so has part: feature:403166-403257:-1:exon
so has part: feature:384331-384509:-1:exon
so has part: feature:381006-381056:-1:exon
so has part: feature:371586-371710:-1:exon
so has part: feature:360034-360126:-1:exon
so has part: feature:353644-353805:-1:exon
so has part: feature:349257-349404:-1:exon
so has part: feature:342828-342943:-1:exon
so has part: feature:342422-342500:-1:exon
so has part: feature:341596-342287:-1:exon
so has part: feature:337824-337948:-1:exon
so has part: feature:336913-337023:-1:exon
so has part: feature:335212-335448:-1:exon

XP_030145447.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:404408-405194:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:403166-403257:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:384331-384509:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:381006-381056:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:371586-371710:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:360034-360126:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:353644-353805:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:349257-349404:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:342828-342943:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:342422-342500:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:341596-342287:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:337824-337948:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:336913-337023:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:335212-335448:-1:exon

LOC121470967
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121470967
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(337955..341587)
location: region:337955-341587:-1
so has part: feature:337955-341587:-1:exon
subclass of: SO_0000010

121470967
type: Gene
SIO_000068: ncbigene

position:337955:-1
position: 337955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:341587:-1
position: 341587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:337955-341587:-1:exon

LOC121470967
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC121470967
product: uncharacterized LOC121470967
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_041720312.1
SIO_010081: LOC121470967
subclass of: SO_0000673
so part of: LOC121470967
location: complement(join(337955..341285,341371..341587))
location: region:337955-341587:-1
so has part: feature:341371-341587:-1:exon
so has part: feature:337955-341285:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:341371-341587:-1:exon

position:341371:-1
position: 341371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:337955-341285:-1:exon

position:341285:-1
position: 341285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121470967
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC121470967
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC121470967
translation: MIAEPLPAPCAGSAGLKHLLGTITSRADPELFLLPCTCWRLCREGVGFCCVALLLSLPVPSARAIPQGTGCSLASLFCFIHFSHASPWLSQLLWAGAGVISIRSSREKPQAHRTDDFVVTGSWEKYFSPGNSILHALSRAARTPHKLLPRLRILGVLIPVNVLVLSWSEHPQQPVPGLEWLFPTLKRCFVEFGLFCVLALSYLRCFSPHFHSLCLSLGFLGGFCQAAGPGGLPQPWEPVTLPGSLSPSVWQPQGWHRVALAFRGADGGRAGPAPSLLLLPTPFLIQAGGCWPSWQPLSLSTQVPVCLGTAQLALPQLL
SIO_010081: LOC121470967
subclass of: SO_0000673
so part of: LOC121470967
location: complement(338430..339386)
location: region:338430-339386:-1
so has part: feature:338430-339386:-1:exon

XP_041576246.1
type: Protein
SIO_000068: ncbiprotein

position:338430:-1
position: 338430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:339386:-1
position: 339386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:338430-339386:-1:exon

RERE
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: RERE
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(459261..622404)
location: region:459261-622404:-1
so has part: feature:459261-622404:-1:exon
subclass of: SO_0000010

100226114
type: Gene
SIO_000068: ncbigene

position:459261:-1
position: 459261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:622404:-1
position: 622404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:459261-622404:-1:exon

RERE
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: RERE
product: arginine-glutamic acid dipeptide repeats
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 22 ESTs, 2 long SRA reads, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 48 samples with support for all annotated introns
transcript id: XM_030289536.3
SIO_010081: RERE
subclass of: SO_0000673
so part of: RERE
location: complement(join(459261..462054,462482..462662,462838..462984,464233..464953,465414..465636,465852..467208,467853..467966,469092..469253,469817..470016,470709..470801,472936..473098,498149..498229,513768..513866,520211..520310,521046..521170,523461..523509,535213..535317,537608..537704,539679..539784,559372..559442,568751..569221,622242..622404))
location: region:459261-622404:-1
so has part: feature:622242-622404:-1:exon
so has part: feature:568751-569221:-1:exon
so has part: feature:559372-559442:-1:exon
so has part: feature:539679-539784:-1:exon
so has part: feature:537608-537704:-1:exon
so has part: feature:535213-535317:-1:exon
so has part: feature:523461-523509:-1:exon
so has part: feature:521046-521170:-1:exon
so has part: feature:520211-520310:-1:exon
so has part: feature:513768-513866:-1:exon
so has part: feature:498149-498229:-1:exon
so has part: feature:472936-473098:-1:exon
so has part: feature:470709-470801:-1:exon
so has part: feature:469817-470016:-1:exon
so has part: feature:469092-469253:-1:exon
so has part: feature:467853-467966:-1:exon
so has part: feature:465852-467208:-1:exon
so has part: feature:465414-465636:-1:exon
so has part: feature:464233-464953:-1:exon
so has part: feature:462838-462984:-1:exon
so has part: feature:462482-462662:-1:exon
so has part: feature:459261-462054:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:622242-622404:-1:exon

position:622242:-1
position: 622242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:568751-569221:-1:exon

position:568751:-1
position: 568751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:569221:-1
position: 569221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:559372-559442:-1:exon

position:559372:-1
position: 559372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:559442:-1
position: 559442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:539679-539784:-1:exon

position:539679:-1
position: 539679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:539784:-1
position: 539784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:537608-537704:-1:exon

position:537608:-1
position: 537608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:537704:-1
position: 537704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:535213-535317:-1:exon

position:535213:-1
position: 535213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:535317:-1
position: 535317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:523461-523509:-1:exon

position:523461:-1
position: 523461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:523509:-1
position: 523509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:521046-521170:-1:exon

position:521046:-1
position: 521046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:521170:-1
position: 521170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:520211-520310:-1:exon

position:520211:-1
position: 520211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:520310:-1
position: 520310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:513768-513866:-1:exon

position:513768:-1
position: 513768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:513866:-1
position: 513866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:498149-498229:-1:exon

position:498149:-1
position: 498149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:498229:-1
position: 498229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:472936-473098:-1:exon

position:472936:-1
position: 472936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:473098:-1
position: 473098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:470709-470801:-1:exon

position:470709:-1
position: 470709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:470801:-1
position: 470801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:469817-470016:-1:exon

position:469817:-1
position: 469817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:470016:-1
position: 470016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:469092-469253:-1:exon

position:469092:-1
position: 469092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:469253:-1
position: 469253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:467853-467966:-1:exon

position:467853:-1
position: 467853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:467966:-1
position: 467966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:465852-467208:-1:exon

position:465852:-1
position: 465852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:467208:-1
position: 467208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:465414-465636:-1:exon

position:465414:-1
position: 465414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:465636:-1
position: 465636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:464233-464953:-1:exon

position:464233:-1
position: 464233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:464953:-1
position: 464953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:462838-462984:-1:exon

position:462838:-1
position: 462838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:462984:-1
position: 462984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:462482-462662:-1:exon

position:462482:-1
position: 462482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:462662:-1
position: 462662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:459261-462054:-1:exon

position:462054:-1
position: 462054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RERE
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: RERE
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: arginine-glutamic acid dipeptide repeats protein
translation: MTADKEKDKDKEKDRDRDRDKERDKRDKARESENSRPRRSCTLEGGAKNYAESEHSEDEDNDNNSATTEESTKKSKKKPPKKKSRYERTDNGEITSFITEDDVVYRPGDCVYIESRRPNTPYFICSIQDFKLSKRDHLLMNVKWYYRQSEVPDSVYQHLVQDRHNENDSGRELVITDPVIKNRELFISDYVDTYHAAALRGKCNISHFSDIFAAREFKARVDSFFYILGYNPETRRLNSTQGEIRVGPSHQAKLPDLQPFPSPDGDTVTQHEELVWMPGVNDCDLLMYLRAARSMAAFAGMCDGGSTEDGCVAASRDDTTLNALNTLHESNYDAGKALQRLVKKPVPKLIEKCWTEDEVKRFIKGLRQYGKNFFRIRKELLPNKETGELITFYYYWKKTPEAASSRAHRRHRRQAVFRRIKTRTASTPVNTPSRPPSSEFLDLSSASEDDFDSEDSEQELKGYACRHCFTTTSKDWHHGGRENILLCTDCRIHFKKYGELPPIEKPVDPPPFMFKPVKEEDDGLSGKHSMRTRRSRGSMSTLRSGRKKQAASPDGRASPIAEDVRSSGRNSPSAASTSSNDSKAESVKKSTKKIKEEVSSPLKNSKRQREKAASDTEEPDRSNAKKSKTQEISRPNSPSEGEGEGESSDSRSVNDEGSSDPKDIDQDNRSTSPSIPSPQDNESDSDSSAQQQVLQAQPQALQAPSGGSAQAAAATPPVPAPLPAPSAAPAPAQASPPASQPSGQPQPPAPLSHIQQAPALHPPRLPSPHPPLQPLSAPQSQPAPAAAQPHAQPPLHGTAAPAPHGLQAQPLLPHAGPAQPFSLPAQPAQSQVPLQTQAPSHPHSGLQVTQPVLPSGASLQQAQPPREQPLPPAPMAMPHIKXPPTTPIPQLPAAPAHKHPPHLSGPSPFSMNSNLPPPPALKPLSSLSTHHPPSAHPPPLQLMPQSQPLQSSQAQPPVLTQSQSLPPPASHPPSALHQVSSQPPFSQHPFVPGGPPSITPPSCPSTSTPPTVPGIPLQTPISTSAASSGTVPVVTACTLPPIQIKEEVPDEAEEPESPPPPPRSPSPEPTVVDIPSHASQSARFYKHLDRGYNSCSRADLYFMPLAGSKLAKKREEAIEKAKREAEQKAREEREREKEKEKEREREREREREAERAAKVSSSSHEGRLGESQLSGPAHMRPSFEPPPTTIAAVPPYIGPDTPALRTLSEYARPHVMSPTNRNHPFFVPLNPTDPLLAYHMPGLYNVDPTIRERELREREIREREIRERELRERMKPGFEVKPPELDALHPATNPMEHFARHGALTIPPTAGPHPFASFHPGLNPLERERLALAGPQLRPEMSYPDRLAAERIHAERMASLTNDPLARLQMFNVTPHHHQHSHIHSHLHLHQQDPLHQGSAGPVHPLVDPLAAGPHLARFPYPPGTIPNPLLGQPPHEHEMLRHPVFGTPYPRDLPGAIPPPMSAAHQLQAMHAQSAELQRLAMEQQWLHGHPHMHGGHLPSQEDYYSRLKKEGDKQL
SIO_010081: RERE
subclass of: SO_0000673
so part of: RERE
location: complement(join(462021..462054,462482..462662,462838..462984,464233..464953,465414..465636,465852..467208,467853..467966,469092..469253,469817..470016,470709..470801,472936..473098,498149..498229,513768..513866,520211..520310,521046..521170,523461..523509,535213..535317,537608..537704,539679..539784,559372..559442,568751..569075))
location: region:462021-569075:-1
so has part: feature:568751-569075:-1:exon
so has part: feature:559372-559442:-1:exon
so has part: feature:539679-539784:-1:exon
so has part: feature:537608-537704:-1:exon
so has part: feature:535213-535317:-1:exon
so has part: feature:523461-523509:-1:exon
so has part: feature:521046-521170:-1:exon
so has part: feature:520211-520310:-1:exon
so has part: feature:513768-513866:-1:exon
so has part: feature:498149-498229:-1:exon
so has part: feature:472936-473098:-1:exon
so has part: feature:470709-470801:-1:exon
so has part: feature:469817-470016:-1:exon
so has part: feature:469092-469253:-1:exon
so has part: feature:467853-467966:-1:exon
so has part: feature:465852-467208:-1:exon
so has part: feature:465414-465636:-1:exon
so has part: feature:464233-464953:-1:exon
so has part: feature:462838-462984:-1:exon
so has part: feature:462482-462662:-1:exon
so has part: feature:462021-462054:-1:exon

XP_030145396.3
type: Protein
SIO_000068: ncbiprotein

position:462021:-1
position: 462021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:569075:-1
position: 569075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:568751-569075:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:559372-559442:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:539679-539784:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:537608-537704:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:535213-535317:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:523461-523509:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:521046-521170:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:520211-520310:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:513768-513866:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:498149-498229:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:472936-473098:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:470709-470801:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:469817-470016:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:469092-469253:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:467853-467966:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:465852-467208:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:465414-465636:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:464233-464953:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:462838-462984:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:462482-462662:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:462021-462054:-1:exon

LOC115497987
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC115497987
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(625523..631617)
location: region:625523-631617:-1
so has part: feature:625523-631617:-1:exon
subclass of: SO_0000011

115497987
type: Gene
SIO_000068: ncbigene

position:625523:-1
position: 625523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:631617:-1
position: 631617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:625523-631617:-1:exon

LOC115497987
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC115497987
product: uncharacterized LOC115497987
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_005982330.1
SIO_010081: LOC115497987
subclass of: SO_0000673
so part of: LOC115497987
location: complement(join(625523..629157,630264..631617))
location: region:625523-631617:-1
so has part: feature:630264-631617:-1:exon
so has part: feature:625523-629157:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:630264-631617:-1:exon

position:630264:-1
position: 630264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:625523-629157:-1:exon

position:629157:-1
position: 629157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ENO1
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: ENO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(632035..644367)
location: region:632035-644367:-1
so has part: feature:632035-644367:-1:exon
subclass of: SO_0000010

100231891
type: Gene
SIO_000068: ncbigene

position:632035:-1
position: 632035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:644367:-1
position: 644367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:632035-644367:-1:exon

ENO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: ENO1
product: enolase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 134 ESTs, 6 long SRA reads, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_030289132.3
SIO_010081: ENO1
subclass of: SO_0000673
so part of: ENO1
location: complement(join(632035..632502,632946..633004,633407..633515,633661..633862,634105..634302,635826..636048,636197..636330,636505..636574,637540..637598,639460..639555,640844..640937,644233..644367))
location: region:632035-644367:-1
so has part: feature:644233-644367:-1:exon
so has part: feature:640844-640937:-1:exon
so has part: feature:639460-639555:-1:exon
so has part: feature:637540-637598:-1:exon
so has part: feature:636505-636574:-1:exon
so has part: feature:636197-636330:-1:exon
so has part: feature:635826-636048:-1:exon
so has part: feature:634105-634302:-1:exon
so has part: feature:633661-633862:-1:exon
so has part: feature:633407-633515:-1:exon
so has part: feature:632946-633004:-1:exon
so has part: feature:632035-632502:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:644233-644367:-1:exon

position:644233:-1
position: 644233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:640844-640937:-1:exon

position:640844:-1
position: 640844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:640937:-1
position: 640937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:639460-639555:-1:exon

position:639460:-1
position: 639460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:639555:-1
position: 639555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:637540-637598:-1:exon

position:637540:-1
position: 637540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:637598:-1
position: 637598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:636505-636574:-1:exon

position:636505:-1
position: 636505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:636574:-1
position: 636574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:636197-636330:-1:exon

position:636197:-1
position: 636197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:636330:-1
position: 636330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:635826-636048:-1:exon

position:635826:-1
position: 635826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:636048:-1
position: 636048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:634105-634302:-1:exon

position:634105:-1
position: 634105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:634302:-1
position: 634302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:633661-633862:-1:exon

position:633661:-1
position: 633661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:633862:-1
position: 633862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:633407-633515:-1:exon

position:633407:-1
position: 633407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:633515:-1
position: 633515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:632946-633004:-1:exon

position:632946:-1
position: 632946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:633004:-1
position: 633004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:632035-632502:-1:exon

position:632502:-1
position: 632502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ENO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: ENO1
product: enolase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 268 ESTs, 90 long SRA reads, 33 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 161 samples with support for all annotated introns
transcript id: XM_002188853.5
SIO_010081: ENO1
subclass of: SO_0000673
so part of: ENO1
location: complement(join(632035..632502,632946..633004,633407..633515,633661..633862,634105..634302,635826..636048,636197..636330,636505..636574,637211..637269,639460..639555,640844..640937,644233..644366))
location: region:632035-644366:-1
so has part: feature:644233-644366:-1:exon
so has part: feature:640844-640937:-1:exon
so has part: feature:639460-639555:-1:exon
so has part: feature:637211-637269:-1:exon
so has part: feature:636505-636574:-1:exon
so has part: feature:636197-636330:-1:exon
so has part: feature:635826-636048:-1:exon
so has part: feature:634105-634302:-1:exon
so has part: feature:633661-633862:-1:exon
so has part: feature:633407-633515:-1:exon
so has part: feature:632946-633004:-1:exon
so has part: feature:632035-632502:-1:exon

position:644366:-1
position: 644366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:644233-644366:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:640844-640937:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:639460-639555:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:637211-637269:-1:exon

position:637211:-1
position: 637211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:637269:-1
position: 637269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:636505-636574:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:636197-636330:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:635826-636048:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:634105-634302:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:633661-633862:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:633407-633515:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:632946-633004:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:632035-632502:-1:exon

ENO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: ENO1
product: enolase 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 246 ESTs, 11 long SRA reads, 32 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_030289133.3
SIO_010081: ENO1
subclass of: SO_0000673
so part of: ENO1
location: complement(join(632035..632502,632946..633004,633407..633515,633661..633862,634105..634302,635826..636048,636197..636330,636505..636574,637211..637269,639460..639555,640844..640937,641677..641694))
location: region:632035-641694:-1
so has part: feature:641677-641694:-1:exon
so has part: feature:640844-640937:-1:exon
so has part: feature:639460-639555:-1:exon
so has part: feature:637211-637269:-1:exon
so has part: feature:636505-636574:-1:exon
so has part: feature:636197-636330:-1:exon
so has part: feature:635826-636048:-1:exon
so has part: feature:634105-634302:-1:exon
so has part: feature:633661-633862:-1:exon
so has part: feature:633407-633515:-1:exon
so has part: feature:632946-633004:-1:exon
so has part: feature:632035-632502:-1:exon

position:641694:-1
position: 641694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:641677-641694:-1:exon

position:641677:-1
position: 641677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:640844-640937:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:639460-639555:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:637211-637269:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:636505-636574:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:636197-636330:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:635826-636048:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:634105-634302:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:633661-633862:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:633407-633515:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:632946-633004:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:632035-632502:-1:exon

ENO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: ENO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-enolase isoform X1
translation: MGAAGGRALRARPAIGERARGWWVSVGAGAATAAGLRSGAASTAVLKMSIIKIHAREIFDSRGNPTVEVDLYTNKGLFRAAVPSGASTGIYEALELRDNDKTRYMGKGVSKAVEHVNKTIAPALISKNVNVVEQEKIDKLMLEMDGTENKSKFGANAILGVSLAVCKAGAAEKGVPLYRHIADLAGNPEVILPVPAFNVINGGSHAGNKLAMQEFMILPVGAESFRDAMRVGAEVYHNLKNVIKEKYGKDATNVGDEGGFAPNILENKEALELLKTAIAKAGYTDKVVIGMDVAASEFYRDGKYDLDFKSPDDPSRYISPDQLADLYKGFVKNYPVVSIEDPFDQDDWGAWKKFTGSVNIQVVGDDLTVTNPKRIAKAVEEKACNCLLLKVNQIGSVTESLQACKLAQSNGWGVMVSHRSGETEDTFIADLVVGLCTGQIKTGAPCRSERLAKYNQLLRIEEELGSKARFAGRNFRNPRVN
SIO_010081: ENO1
subclass of: SO_0000673
so part of: ENO1
location: complement(join(632433..632502,632946..633004,633407..633515,633661..633862,634105..634302,635826..636048,636197..636330,636505..636574,637211..637269,639460..639555,640844..640937,644233..644364))
location: region:632433-644364:-1
so has part: feature:644233-644364:-1:exon
so has part: feature:640844-640937:-1:exon
so has part: feature:639460-639555:-1:exon
so has part: feature:637211-637269:-1:exon
so has part: feature:636505-636574:-1:exon
so has part: feature:636197-636330:-1:exon
so has part: feature:635826-636048:-1:exon
so has part: feature:634105-634302:-1:exon
so has part: feature:633661-633862:-1:exon
so has part: feature:633407-633515:-1:exon
so has part: feature:632946-633004:-1:exon
so has part: feature:632433-632502:-1:exon

XP_002188889.4
type: Protein
SIO_000068: ncbiprotein

position:632433:-1
position: 632433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:644364:-1
position: 644364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:644233-644364:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:640844-640937:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:639460-639555:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:637211-637269:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:636505-636574:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:636197-636330:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:635826-636048:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:634105-634302:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:633661-633862:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:633407-633515:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:632946-633004:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:632433-632502:-1:exon

ENO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: ENO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-enolase isoform X2
translation: MGAAGGRALRARPAIGERARGWWVSVGAGAATAAGLRSGAASTAVLKMSIIKIHAREIFDSRGNPTVEVDLYTNKGLFRAAVPSGASTGIYEALELRDNDKTRYMGKGVSRAVKYVNEFLATALCTQNVNVVEQEKIDKLMLEMDGTENKSKFGANAILGVSLAVCKAGAAEKGVPLYRHIADLAGNPEVILPVPAFNVINGGSHAGNKLAMQEFMILPVGAESFRDAMRVGAEVYHNLKNVIKEKYGKDATNVGDEGGFAPNILENKEALELLKTAIAKAGYTDKVVIGMDVAASEFYRDGKYDLDFKSPDDPSRYISPDQLADLYKGFVKNYPVVSIEDPFDQDDWGAWKKFTGSVNIQVVGDDLTVTNPKRIAKAVEEKACNCLLLKVNQIGSVTESLQACKLAQSNGWGVMVSHRSGETEDTFIADLVVGLCTGQIKTGAPCRSERLAKYNQLLRIEEELGSKARFAGRNFRNPRVN
SIO_010081: ENO1
subclass of: SO_0000673
so part of: ENO1
location: complement(join(632433..632502,632946..633004,633407..633515,633661..633862,634105..634302,635826..636048,636197..636330,636505..636574,637540..637598,639460..639555,640844..640937,644233..644364))
location: region:632433-644364:-1
so has part: feature:644233-644364:-1:exon
so has part: feature:640844-640937:-1:exon
so has part: feature:639460-639555:-1:exon
so has part: feature:637540-637598:-1:exon
so has part: feature:636505-636574:-1:exon
so has part: feature:636197-636330:-1:exon
so has part: feature:635826-636048:-1:exon
so has part: feature:634105-634302:-1:exon
so has part: feature:633661-633862:-1:exon
so has part: feature:633407-633515:-1:exon
so has part: feature:632946-633004:-1:exon
so has part: feature:632433-632502:-1:exon

XP_030144992.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:644233-644364:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:640844-640937:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:639460-639555:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:637540-637598:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:636505-636574:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:636197-636330:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:635826-636048:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:634105-634302:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:633661-633862:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:633407-633515:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:632946-633004:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:632433-632502:-1:exon

ENO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: ENO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-enolase isoform X3
translation: MSIIKIHAREIFDSRGNPTVEVDLYTNKGLFRAAVPSGASTGIYEALELRDNDKTRYMGKGVSKAVEHVNKTIAPALISKNVNVVEQEKIDKLMLEMDGTENKSKFGANAILGVSLAVCKAGAAEKGVPLYRHIADLAGNPEVILPVPAFNVINGGSHAGNKLAMQEFMILPVGAESFRDAMRVGAEVYHNLKNVIKEKYGKDATNVGDEGGFAPNILENKEALELLKTAIAKAGYTDKVVIGMDVAASEFYRDGKYDLDFKSPDDPSRYISPDQLADLYKGFVKNYPVVSIEDPFDQDDWGAWKKFTGSVNIQVVGDDLTVTNPKRIAKAVEEKACNCLLLKVNQIGSVTESLQACKLAQSNGWGVMVSHRSGETEDTFIADLVVGLCTGQIKTGAPCRSERLAKYNQLLRIEEELGSKARFAGRNFRNPRVN
SIO_010081: ENO1
subclass of: SO_0000673
so part of: ENO1
location: complement(join(632433..632502,632946..633004,633407..633515,633661..633862,634105..634302,635826..636048,636197..636330,636505..636574,637211..637269,639460..639555,640844..640928))
location: region:632433-640928:-1
so has part: feature:640844-640928:-1:exon
so has part: feature:639460-639555:-1:exon
so has part: feature:637211-637269:-1:exon
so has part: feature:636505-636574:-1:exon
so has part: feature:636197-636330:-1:exon
so has part: feature:635826-636048:-1:exon
so has part: feature:634105-634302:-1:exon
so has part: feature:633661-633862:-1:exon
so has part: feature:633407-633515:-1:exon
so has part: feature:632946-633004:-1:exon
so has part: feature:632433-632502:-1:exon

XP_030144993.3
type: Protein
SIO_000068: ncbiprotein

position:640928:-1
position: 640928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:640844-640928:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:639460-639555:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:637211-637269:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:636505-636574:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:636197-636330:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:635826-636048:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:634105-634302:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:633661-633862:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:633407-633515:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:632946-633004:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:632433-632502:-1:exon

CA6
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: CA6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 655820..663747
location: region:655820-663747:1
so has part: feature:655820-663747:1:exon
subclass of: SO_0000010

100231889
type: Gene
SIO_000068: ncbigene

position:655820:1
position: 655820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:663747:1
position: 663747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:655820-663747:1:exon

CA6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: CA6
product: carbonic anhydrase 6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 74% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030289597.3
SIO_010081: CA6
subclass of: SO_0000673
so part of: CA6
location: join(655820..655995,658645..658793,659106..659201,659734..659800,660285..660442,661895..662018,662217..662315,662807..663747)
location: region:655820-663747:1
so has part: feature:655820-655995:1:exon
so has part: feature:658645-658793:1:exon
so has part: feature:659106-659201:1:exon
so has part: feature:659734-659800:1:exon
so has part: feature:660285-660442:1:exon
so has part: feature:661895-662018:1:exon
so has part: feature:662217-662315:1:exon
so has part: feature:662807-663747:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:655820-655995:1:exon

position:655995:1
position: 655995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:658645-658793:1:exon

position:658645:1
position: 658645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:658793:1
position: 658793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:659106-659201:1:exon

position:659106:1
position: 659106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:659201:1
position: 659201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:659734-659800:1:exon

position:659734:1
position: 659734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:659800:1
position: 659800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:660285-660442:1:exon

position:660285:1
position: 660285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:660442:1
position: 660442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:661895-662018:1:exon

position:661895:1
position: 661895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:662018:1
position: 662018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:662217-662315:1:exon

position:662217:1
position: 662217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:662315:1
position: 662315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:662807-663747:1:exon

position:662807:1
position: 662807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CA6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: CA6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carbonic anhydrase 6
translation: MTNNGHSVQIDLPPTMNISRGLPGVYTAVQMHLHWGGLDLESSGSEHTIDGMRYFAELHIVHYDSANYSSFEEAKDKPQGLAVLAFLYTDGHFENTYYSEFISKLARIRFAGQSTTLSSLDIQAMLPENLSHFYRYQGSLTTPPCSESVIWTIFHSPIVLSHTQVQLLENTLLDWHNRTLRNDYRHAQPLRGRVVEASFRAQRGQAQCHPEELTLRLDQIQMQLQDMKTELLNGLSHTGTKSSTFPAFYFPVENIESFVEVHPLRAVSLQAFTLCFWSRAQPVGSQTVLSYSTGERDRELAVTVGSELGLWVGGHFLSFPLQQEAQGWLHHCVTWASPEGRASLWLNGAAGQAQSVQKGYVSRAGGTLLLGKARDALLGTFSNGFGGWLSRVNLWSRVLSAAELRALALCRAGQPTGDVIAWGQTPMALLGGVLLQPDTSCQ
SIO_010081: CA6
subclass of: SO_0000673
so part of: CA6
location: join(655974..655995,658645..658793,659106..659201,659734..659800,660285..660442,661895..662018,662217..662315,662807..663420)
location: region:655974-663420:1
so has part: feature:655974-655995:1:exon
so has part: feature:658645-658793:1:exon
so has part: feature:659106-659201:1:exon
so has part: feature:659734-659800:1:exon
so has part: feature:660285-660442:1:exon
so has part: feature:661895-662018:1:exon
so has part: feature:662217-662315:1:exon
so has part: feature:662807-663420:1:exon

XP_030145457.3
type: Protein
SIO_000068: ncbiprotein

position:655974:1
position: 655974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:663420:1
position: 663420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:655974-655995:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:658645-658793:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:659106-659201:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:659734-659800:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:660285-660442:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:661895-662018:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:662217-662315:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:662807-663420:1:exon

LOC100219398
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC100219398
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(664125..673987)
location: region:664125-673987:-1
so has part: feature:664125-673987:-1:exon
subclass of: SO_0000010

100219398
type: Gene
SIO_000068: ncbigene

position:664125:-1
position: 664125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:673987:-1
position: 673987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:664125-673987:-1:exon

LOC100219398
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC100219398
product: solute carrier family 2, facilitated glucose transporter member 5, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_041720368.1
SIO_010081: LOC100219398
subclass of: SO_0000673
so part of: LOC100219398
location: complement(join(664125..664740,665362..665489,665779..665854,666230..666331,666594..666704,667215..667402,668695..668847,670624..670748,671210..671370,671705..671803,673266..673383,673850..673987))
location: region:664125-673987:-1
so has part: feature:673850-673987:-1:exon
so has part: feature:673266-673383:-1:exon
so has part: feature:671705-671803:-1:exon
so has part: feature:671210-671370:-1:exon
so has part: feature:670624-670748:-1:exon
so has part: feature:668695-668847:-1:exon
so has part: feature:667215-667402:-1:exon
so has part: feature:666594-666704:-1:exon
so has part: feature:666230-666331:-1:exon
so has part: feature:665779-665854:-1:exon
so has part: feature:665362-665489:-1:exon
so has part: feature:664125-664740:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:673850-673987:-1:exon

position:673850:-1
position: 673850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:673266-673383:-1:exon

position:673266:-1
position: 673266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:673383:-1
position: 673383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:671705-671803:-1:exon

position:671705:-1
position: 671705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:671803:-1
position: 671803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:671210-671370:-1:exon

position:671210:-1
position: 671210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:671370:-1
position: 671370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:670624-670748:-1:exon

position:670624:-1
position: 670624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:670748:-1
position: 670748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:668695-668847:-1:exon

position:668695:-1
position: 668695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:668847:-1
position: 668847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:667215-667402:-1:exon

position:667215:-1
position: 667215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:667402:-1
position: 667402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:666594-666704:-1:exon

position:666594:-1
position: 666594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:666704:-1
position: 666704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:666230-666331:-1:exon

position:666230:-1
position: 666230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:666331:-1
position: 666331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:665779-665854:-1:exon

position:665779:-1
position: 665779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:665854:-1
position: 665854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:665362-665489:-1:exon

position:665362:-1
position: 665362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:665489:-1
position: 665489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:664125-664740:-1:exon

position:664740:-1
position: 664740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100219398
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC100219398
product: solute carrier family 2, facilitated glucose transporter member 5, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 long SRA read, 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 58 samples with support for all annotated introns
transcript id: XM_002187376.5
SIO_010081: LOC100219398
subclass of: SO_0000673
so part of: LOC100219398
location: complement(join(664125..664740,665362..665489,665779..665854,666230..666331,666594..666704,667215..667402,668488..668613,668695..668847,670624..670748,671210..671370,671705..671803,673266..673383,673850..673987))
location: region:664125-673987:-1
so has part: feature:673850-673987:-1:exon
so has part: feature:673266-673383:-1:exon
so has part: feature:671705-671803:-1:exon
so has part: feature:671210-671370:-1:exon
so has part: feature:670624-670748:-1:exon
so has part: feature:668695-668847:-1:exon
so has part: feature:668488-668613:-1:exon
so has part: feature:667215-667402:-1:exon
so has part: feature:666594-666704:-1:exon
so has part: feature:666230-666331:-1:exon
so has part: feature:665779-665854:-1:exon
so has part: feature:665362-665489:-1:exon
so has part: feature:664125-664740:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:673850-673987:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:673266-673383:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:671705-671803:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:671210-671370:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:670624-670748:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:668695-668847:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:668488-668613:-1:exon

position:668488:-1
position: 668488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:668613:-1
position: 668613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:667215-667402:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:666594-666704:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:666230-666331:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:665779-665854:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:665362-665489:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:664125-664740:-1:exon

LOC100219398
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC100219398
product: solute carrier family 2, facilitated glucose transporter member 5, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_041720367.1
SIO_010081: LOC100219398
subclass of: SO_0000673
so part of: LOC100219398
location: complement(join(664125..664740,665362..665489,665779..665854,666230..666331,666594..666704,667215..667402,668488..668613,668695..668847,670624..670748,671210..671370,671705..671803,673266..673383,673547..673827))
location: region:664125-673827:-1
so has part: feature:673547-673827:-1:exon
so has part: feature:673266-673383:-1:exon
so has part: feature:671705-671803:-1:exon
so has part: feature:671210-671370:-1:exon
so has part: feature:670624-670748:-1:exon
so has part: feature:668695-668847:-1:exon
so has part: feature:668488-668613:-1:exon
so has part: feature:667215-667402:-1:exon
so has part: feature:666594-666704:-1:exon
so has part: feature:666230-666331:-1:exon
so has part: feature:665779-665854:-1:exon
so has part: feature:665362-665489:-1:exon
so has part: feature:664125-664740:-1:exon

position:673827:-1
position: 673827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:673547-673827:-1:exon

position:673547:-1
position: 673547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:673266-673383:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:671705-671803:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:671210-671370:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:670624-670748:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:668695-668847:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:668488-668613:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:667215-667402:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:666594-666704:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:666230-666331:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:665779-665854:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:665362-665489:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:664125-664740:-1:exon

LOC100219398
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC100219398
product: solute carrier family 2, facilitated glucose transporter member 5, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_030289219.3
SIO_010081: LOC100219398
subclass of: SO_0000673
so part of: LOC100219398
location: complement(join(664125..664740,665362..665489,665779..665854,666230..666331,666594..666704,667215..667402,668488..668613,668695..668847,670624..670748,671705..671803))
location: region:664125-671803:-1
so has part: feature:671705-671803:-1:exon
so has part: feature:670624-670748:-1:exon
so has part: feature:668695-668847:-1:exon
so has part: feature:668488-668613:-1:exon
so has part: feature:667215-667402:-1:exon
so has part: feature:666594-666704:-1:exon
so has part: feature:666230-666331:-1:exon
so has part: feature:665779-665854:-1:exon
so has part: feature:665362-665489:-1:exon
so has part: feature:664125-664740:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:671705-671803:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:670624-670748:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:668695-668847:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:668488-668613:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:667215-667402:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:666594-666704:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:666230-666331:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:665779-665854:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:665362-665489:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:664125-664740:-1:exon

LOC100219398
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC100219398
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 2, facilitated glucose transporter member 5 isoform X2
translation: MELKGGKQDSSEGSEGAKGKMTLPLALVALISAFGSSFQYGYNVSVINSPAPYVQGFYNRTYLDRTGVPMDRGLQTLLWSLTVSMFPLGGLFGSLMVWPMVNSCGRKGTLLINNLFSIAAAILMGTSELAKTFEVIILSRVVMGIFAGLASNVVPMFLGEMSPKNLRGAIGVVPQLFITIGILAAQILGLNSILGNAKALQRLRGWQDVEEEIQEMYQENRSEKEEGQFSVLSLFTFRGLRWQLISIIVMMAGQQLSGVNGVFYYADRIFESAGVHSSSIQYVTVSIGAINVVMTLLAVFIVESLGRRILLLAGFVLCSASCALLTLALNLQSTVSWMSYLSILCVIAYIIGHALGPSPIPAVMITEMFLQSSRPAAFMVGGSVHWLSNFTVGLVFLYMEAGLGPYSFLIFCAICIATTLYIFFIVPETKNKTFMEINRIMAKRNKVEVQESKELKDSYPLSRQEEKKSLSSSEM
SIO_010081: LOC100219398
subclass of: SO_0000673
so part of: LOC100219398
location: complement(join(664513..664740,665362..665489,665779..665854,666230..666331,666594..666704,667215..667402,668695..668847,670624..670748,671210..671370,671705..671803,673266..673322))
location: region:664513-673322:-1
so has part: feature:673266-673322:-1:exon
so has part: feature:671705-671803:-1:exon
so has part: feature:671210-671370:-1:exon
so has part: feature:670624-670748:-1:exon
so has part: feature:668695-668847:-1:exon
so has part: feature:667215-667402:-1:exon
so has part: feature:666594-666704:-1:exon
so has part: feature:666230-666331:-1:exon
so has part: feature:665779-665854:-1:exon
so has part: feature:665362-665489:-1:exon
so has part: feature:664513-664740:-1:exon

XP_041576302.1
type: Protein
SIO_000068: ncbiprotein

position:664513:-1
position: 664513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:673322:-1
position: 673322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:673266-673322:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:671705-671803:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:671210-671370:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:670624-670748:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:668695-668847:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:667215-667402:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:666594-666704:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:666230-666331:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:665779-665854:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:665362-665489:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:664513-664740:-1:exon

LOC100219398
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC100219398
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 2, facilitated glucose transporter member 5 isoform X1
translation: MELKGGKQDSSEGSEGAKGKMTLPLALVALISAFGSSFQYGYNVSVINSPAPYVQGFYNRTYLDRTGVPMDRGLQTLLWSLTVSMFPLGGLFGSLMVWPMVNSCGRKGTLLINNLFSIAAAILMGTSELAKTFEVIILSRVVMGIFAGLASNVVPMFLGEMSPKNLRGAIGVVPQLFITIGILAAQILGLNSILGNAKGWPVLLGLTGIPSLIQLLTLPLFPESPRYLLIQKGDEEQARRALQRLRGWQDVEEEIQEMYQENRSEKEEGQFSVLSLFTFRGLRWQLISIIVMMAGQQLSGVNGVFYYADRIFESAGVHSSSIQYVTVSIGAINVVMTLLAVFIVESLGRRILLLAGFVLCSASCALLTLALNLQSTVSWMSYLSILCVIAYIIGHALGPSPIPAVMITEMFLQSSRPAAFMVGGSVHWLSNFTVGLVFLYMEAGLGPYSFLIFCAICIATTLYIFFIVPETKNKTFMEINRIMAKRNKVEVQESKELKDSYPLSRQEEKKSLSSSEM
SIO_010081: LOC100219398
subclass of: SO_0000673
so part of: LOC100219398
location: complement(join(664513..664740,665362..665489,665779..665854,666230..666331,666594..666704,667215..667402,668488..668613,668695..668847,670624..670748,671210..671370,671705..671803,673266..673322))
location: region:664513-673322:-1
so has part: feature:673266-673322:-1:exon
so has part: feature:671705-671803:-1:exon
so has part: feature:671210-671370:-1:exon
so has part: feature:670624-670748:-1:exon
so has part: feature:668695-668847:-1:exon
so has part: feature:668488-668613:-1:exon
so has part: feature:667215-667402:-1:exon
so has part: feature:666594-666704:-1:exon
so has part: feature:666230-666331:-1:exon
so has part: feature:665779-665854:-1:exon
so has part: feature:665362-665489:-1:exon
so has part: feature:664513-664740:-1:exon

XP_002187412.4
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:673266-673322:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:671705-671803:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:671210-671370:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:670624-670748:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:668695-668847:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:668488-668613:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:667215-667402:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:666594-666704:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:666230-666331:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:665779-665854:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:665362-665489:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:664513-664740:-1:exon

LOC100219398
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC100219398
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 2, facilitated glucose transporter member 5 isoform X1
translation: MELKGGKQDSSEGSEGAKGKMTLPLALVALISAFGSSFQYGYNVSVINSPAPYVQGFYNRTYLDRTGVPMDRGLQTLLWSLTVSMFPLGGLFGSLMVWPMVNSCGRKGTLLINNLFSIAAAILMGTSELAKTFEVIILSRVVMGIFAGLASNVVPMFLGEMSPKNLRGAIGVVPQLFITIGILAAQILGLNSILGNAKGWPVLLGLTGIPSLIQLLTLPLFPESPRYLLIQKGDEEQARRALQRLRGWQDVEEEIQEMYQENRSEKEEGQFSVLSLFTFRGLRWQLISIIVMMAGQQLSGVNGVFYYADRIFESAGVHSSSIQYVTVSIGAINVVMTLLAVFIVESLGRRILLLAGFVLCSASCALLTLALNLQSTVSWMSYLSILCVIAYIIGHALGPSPIPAVMITEMFLQSSRPAAFMVGGSVHWLSNFTVGLVFLYMEAGLGPYSFLIFCAICIATTLYIFFIVPETKNKTFMEINRIMAKRNKVEVQESKELKDSYPLSRQEEKKSLSSSEM
SIO_010081: LOC100219398
subclass of: SO_0000673
so part of: LOC100219398
location: complement(join(664513..664740,665362..665489,665779..665854,666230..666331,666594..666704,667215..667402,668488..668613,668695..668847,670624..670748,671210..671370,671705..671803,673266..673322))
location: region:664513-673322:-1
so has part: feature:673266-673322:-1:exon
so has part: feature:671705-671803:-1:exon
so has part: feature:671210-671370:-1:exon
so has part: feature:670624-670748:-1:exon
so has part: feature:668695-668847:-1:exon
so has part: feature:668488-668613:-1:exon
so has part: feature:667215-667402:-1:exon
so has part: feature:666594-666704:-1:exon
so has part: feature:666230-666331:-1:exon
so has part: feature:665779-665854:-1:exon
so has part: feature:665362-665489:-1:exon
so has part: feature:664513-664740:-1:exon

XP_041576301.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:673266-673322:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:671705-671803:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:671210-671370:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:670624-670748:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:668695-668847:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:668488-668613:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:667215-667402:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:666594-666704:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:666230-666331:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:665779-665854:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:665362-665489:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:664513-664740:-1:exon

LOC100219398
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC100219398
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 2, facilitated glucose transporter member 5 isoform X3
translation: MGTSELAKTFEVIILSRVVMGIFAGLASNVVPMFLGEMSPKNLRGAIGVVPQLFITIGILAAQILGLNSILGNAKGWPVLLGLTGIPSLIQLLTLPLFPESPRYLLIQKGDEEQARRALQRLRGWQDVEEEIQEMYQENRSEKEEGQFSVLSLFTFRGLRWQLISIIVMMAGQQLSGVNGVFYYADRIFESAGVHSSSIQYVTVSIGAINVVMTLLAVFIVESLGRRILLLAGFVLCSASCALLTLALNLQSTVSWMSYLSILCVIAYIIGHALGPSPIPAVMITEMFLQSSRPAAFMVGGSVHWLSNFTVGLVFLYMEAGLGPYSFLIFCAICIATTLYIFFIVPETKNKTFMEINRIMAKRNKVEVQESKELKDSYPLSRQEEKKSLSSSEM
SIO_010081: LOC100219398
subclass of: SO_0000673
so part of: LOC100219398
location: complement(join(664513..664740,665362..665489,665779..665854,666230..666331,666594..666704,667215..667402,668488..668613,668695..668847,670624..670696))
location: region:664513-670696:-1
so has part: feature:670624-670696:-1:exon
so has part: feature:668695-668847:-1:exon
so has part: feature:668488-668613:-1:exon
so has part: feature:667215-667402:-1:exon
so has part: feature:666594-666704:-1:exon
so has part: feature:666230-666331:-1:exon
so has part: feature:665779-665854:-1:exon
so has part: feature:665362-665489:-1:exon
so has part: feature:664513-664740:-1:exon

XP_030145079.3
type: Protein
SIO_000068: ncbiprotein

position:670696:-1
position: 670696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:670624-670696:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:668695-668847:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:668488-668613:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:667215-667402:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:666594-666704:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:666230-666331:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:665779-665854:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:665362-665489:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:664513-664740:-1:exon

GPR157
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: GPR157
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(675648..686393)
location: region:675648-686393:-1
so has part: feature:675648-686393:-1:exon
subclass of: SO_0000010

100222258
type: Gene
SIO_000068: ncbigene

position:675648:-1
position: 675648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:686393:-1
position: 686393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:675648-686393:-1:exon

GPR157
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: GPR157
product: G protein-coupled receptor 157, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_030289221.3
SIO_010081: GPR157
subclass of: SO_0000673
so part of: GPR157
location: complement(join(675648..676326,677974..678227,678983..679177,680531..680744,685985..686393))
location: region:675648-686393:-1
so has part: feature:685985-686393:-1:exon
so has part: feature:680531-680744:-1:exon
so has part: feature:678983-679177:-1:exon
so has part: feature:677974-678227:-1:exon
so has part: feature:675648-676326:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:685985-686393:-1:exon

position:685985:-1
position: 685985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:680531-680744:-1:exon

position:680531:-1
position: 680531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:680744:-1
position: 680744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:678983-679177:-1:exon

position:678983:-1
position: 678983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:679177:-1
position: 679177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:677974-678227:-1:exon

position:677974:-1
position: 677974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:678227:-1
position: 678227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:675648-676326:-1:exon

position:676326:-1
position: 676326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GPR157
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: GPR157
product: G protein-coupled receptor 157, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_041720370.1
SIO_010081: GPR157
subclass of: SO_0000673
so part of: GPR157
location: complement(join(676422..676443,677974..678227,678983..679177,680531..680744,685985..686393))
location: region:676422-686393:-1
so has part: feature:685985-686393:-1:exon
so has part: feature:680531-680744:-1:exon
so has part: feature:678983-679177:-1:exon
so has part: feature:677974-678227:-1:exon
so has part: feature:676422-676443:-1:exon

position:676422:-1
position: 676422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:685985-686393:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:680531-680744:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:678983-679177:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:677974-678227:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:676422-676443:-1:exon

position:676443:-1
position: 676443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GPR157
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: GPR157
product: G protein-coupled receptor 157, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_041720371.1
SIO_010081: GPR157
subclass of: SO_0000673
so part of: GPR157
location: complement(join(676629..676869,677974..678227,680531..680744,685985..686393))
location: region:676629-686393:-1
so has part: feature:685985-686393:-1:exon
so has part: feature:680531-680744:-1:exon
so has part: feature:677974-678227:-1:exon
so has part: feature:676629-676869:-1:exon

position:676629:-1
position: 676629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:685985-686393:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:680531-680744:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:677974-678227:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:676629-676869:-1:exon

position:676869:-1
position: 676869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GPR157
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: GPR157
product: G protein-coupled receptor 157, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_041720369.1
SIO_010081: GPR157
subclass of: SO_0000673
so part of: GPR157
location: complement(join(676629..676869,677974..678227,678983..679177,680531..680744,685985..686393))
location: region:676629-686393:-1
so has part: feature:685985-686393:-1:exon
so has part: feature:680531-680744:-1:exon
so has part: feature:678983-679177:-1:exon
so has part: feature:677974-678227:-1:exon
so has part: feature:676629-676869:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:685985-686393:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:680531-680744:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:678983-679177:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:677974-678227:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:676629-676869:-1:exon

GPR157
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: GPR157
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G-protein coupled receptor 157 isoform X2
translation: MSPLPPTRLPPAERGAVLLSCALSCAGSALLLGSQARWPELRTRPRQLLLQLSLADLLSALSYFYGVLRDFQRTSWDCVLQGALSTFANTSSFFWTMAIALYLYLTLVRGSPAGTGLLWGFHAVSWGVPLAITVAAVALKKIGYDASNVSVGWCWVNLDAEDRLLWMLLTGKVWEILAYVTLPVLYILIKKHINRAGIGNTFQGGANCVLFVLCTRAVRARLRGLLCCGLRAWPGLRAPGSGQQPHGDGDGDRDRPDPGPAKPLLPST
SIO_010081: GPR157
subclass of: SO_0000673
so part of: GPR157
location: complement(join(678009..678227,680531..680744,685985..686358))
location: region:678009-686358:-1
so has part: feature:685985-686358:-1:exon
so has part: feature:680531-680744:-1:exon
so has part: feature:678009-678227:-1:exon

XP_041576305.1
type: Protein
SIO_000068: ncbiprotein

position:678009:-1
position: 678009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:686358:-1
position: 686358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:685985-686358:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:680531-680744:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:678009-678227:-1:exon

GPR157
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: GPR157
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G-protein coupled receptor 157 isoform X1
translation: MSPLPPTRLPPAERGAVLLSCALSCAGSALLLGSQARWPELRTRPRQLLLQLSLADLLSALSYFYGVLRDFQRTSWDCVLQGALSTFANTSSFFWTMAIALYLYLTLVRGSPAGTGLLWGFHAVSWGVPLAITVAAVALKKIGYDASNVSVGWCWVNLDAEDRLLWMLLTGKVWEILAYVTLPVLYILIKKHINRAHAALSEYRPILPGAPALQPRASVADKKLILIPVIFIFLRIWSTVRFVLTLCGSPAVQNPVLVVLHGIGNTFQGGANCVLFVLCTRAVRARLRGLLCCGLRAWPGLRAPGSGQQPHGDGDGDRDRPDPGPAKPLLPST
SIO_010081: GPR157
subclass of: SO_0000673
so part of: GPR157
location: complement(join(678009..678227,678983..679177,680531..680744,685985..686358))
location: region:678009-686358:-1
so has part: feature:685985-686358:-1:exon
so has part: feature:680531-680744:-1:exon
so has part: feature:678983-679177:-1:exon
so has part: feature:678009-678227:-1:exon

XP_041576303.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:685985-686358:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:680531-680744:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:678983-679177:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:678009-678227:-1:exon

GPR157
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: GPR157
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G-protein coupled receptor 157 isoform X1
translation: MSPLPPTRLPPAERGAVLLSCALSCAGSALLLGSQARWPELRTRPRQLLLQLSLADLLSALSYFYGVLRDFQRTSWDCVLQGALSTFANTSSFFWTMAIALYLYLTLVRGSPAGTGLLWGFHAVSWGVPLAITVAAVALKKIGYDASNVSVGWCWVNLDAEDRLLWMLLTGKVWEILAYVTLPVLYILIKKHINRAHAALSEYRPILPGAPALQPRASVADKKLILIPVIFIFLRIWSTVRFVLTLCGSPAVQNPVLVVLHGIGNTFQGGANCVLFVLCTRAVRARLRGLLCCGLRAWPGLRAPGSGQQPHGDGDGDRDRPDPGPAKPLLPST
SIO_010081: GPR157
subclass of: SO_0000673
so part of: GPR157
location: complement(join(678009..678227,678983..679177,680531..680744,685985..686358))
location: region:678009-686358:-1
so has part: feature:685985-686358:-1:exon
so has part: feature:680531-680744:-1:exon
so has part: feature:678983-679177:-1:exon
so has part: feature:678009-678227:-1:exon

XP_030145081.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:685985-686358:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:680531-680744:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:678983-679177:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:678009-678227:-1:exon

GPR157
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: GPR157
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G-protein coupled receptor 157 isoform X1
translation: MSPLPPTRLPPAERGAVLLSCALSCAGSALLLGSQARWPELRTRPRQLLLQLSLADLLSALSYFYGVLRDFQRTSWDCVLQGALSTFANTSSFFWTMAIALYLYLTLVRGSPAGTGLLWGFHAVSWGVPLAITVAAVALKKIGYDASNVSVGWCWVNLDAEDRLLWMLLTGKVWEILAYVTLPVLYILIKKHINRAHAALSEYRPILPGAPALQPRASVADKKLILIPVIFIFLRIWSTVRFVLTLCGSPAVQNPVLVVLHGIGNTFQGGANCVLFVLCTRAVRARLRGLLCCGLRAWPGLRAPGSGQQPHGDGDGDRDRPDPGPAKPLLPST
SIO_010081: GPR157
subclass of: SO_0000673
so part of: GPR157
location: complement(join(678009..678227,678983..679177,680531..680744,685985..686358))
location: region:678009-686358:-1
so has part: feature:685985-686358:-1:exon
so has part: feature:680531-680744:-1:exon
so has part: feature:678983-679177:-1:exon
so has part: feature:678009-678227:-1:exon

XP_041576304.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:685985-686358:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:680531-680744:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:678983-679177:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:678009-678227:-1:exon

LOC116809194
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC116809194
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(687271..693950)
location: region:687271-693950:-1
so has part: feature:687271-693950:-1:exon
subclass of: SO_0000011

116809194
type: Gene
SIO_000068: ncbigene

position:687271:-1
position: 687271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:693950:-1
position: 693950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:687271-693950:-1:exon

LOC116809194
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC116809194
product: uncharacterized LOC116809194, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_005982352.1
SIO_010081: LOC116809194
subclass of: SO_0000673
so part of: LOC116809194
location: complement(join(687271..688294,689720..689836,691631..691708,693201..693950))
location: region:687271-693950:-1
so has part: feature:693201-693950:-1:exon
so has part: feature:691631-691708:-1:exon
so has part: feature:689720-689836:-1:exon
so has part: feature:687271-688294:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:693201-693950:-1:exon

position:693201:-1
position: 693201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:691631-691708:-1:exon

position:691631:-1
position: 691631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:691708:-1
position: 691708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:689720-689836:-1:exon

position:689720:-1
position: 689720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:689836:-1
position: 689836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:687271-688294:-1:exon

position:688294:-1
position: 688294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116809194
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC116809194
product: uncharacterized LOC116809194, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XR_005982351.1
SIO_010081: LOC116809194
subclass of: SO_0000673
so part of: LOC116809194
location: complement(join(687271..688294,689720..691624))
location: region:687271-691624:-1
so has part: feature:689720-691624:-1:exon
so has part: feature:687271-688294:-1:exon

position:691624:-1
position: 691624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:689720-691624:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:687271-688294:-1:exon

MIR34A
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
alternative label: tgu-mir-34a
gene: MIR34A
gene synonym: tgu-mir-34a
note: microRNA mir-34a; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: complement(691556..691627)
location: region:691556-691627:-1
so has part: feature:691556-691627:-1:exon
subclass of: SO_0000571

100886692
type: Gene
SIO_000068: ncbigene

MI0013826
type: miRBase
SIO_000068: mirbase

position:691556:-1
position: 691556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:691627:-1
position: 691627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:691556-691627:-1:exon

MIR34A
type: Precursor RNA
subclass of: SO_0000185
RO_0002162: 59729
alternative label: tgu-mir-34a
gene: MIR34A
gene synonym: tgu-mir-34a
product: microRNA mir-34a
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NR_049134.1
SIO_010081: MIR34A
subclass of: SO_0000673
so part of: MIR34A
location: complement(691556..691627)
location: region:691556-691627:-1
so has part: feature:691556-691627:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:691556-691627:-1:exon

MIR34A
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
alternative label: tgu-mir-34a
nc RNA class: miRNA
gene: MIR34A
gene synonym: tgu-mir-34a
product: tgu-miR-34a
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
SIO_010081: MIR34A
subclass of: SO_0000673
so part of: MIR34A
location: complement(691596..691617)
location: region:691596-691617:-1
so has part: feature:691596-691617:-1:exon

MIMAT0014598
type: miRBase
SIO_000068: mirbase

position:691596:-1
position: 691596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:691617:-1
position: 691617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:691596-691617:-1:exon

H6PD
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: H6PD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 708939..720031
location: region:708939-720031:1
so has part: feature:708939-720031:1:exon
subclass of: SO_0000010

100228049
type: Gene
SIO_000068: ncbigene

position:708939:1
position: 708939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:720031:1
position: 720031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:708939-720031:1:exon

H6PD
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: H6PD
product: hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 10 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_002187289.5
SIO_010081: H6PD
subclass of: SO_0000673
so part of: H6PD
location: join(708939..708991,709755..709867,710016..710128,711092..711241,712415..713070,714127..714244,715672..715941,716984..720031)
location: region:708939-720031:1
so has part: feature:708939-708991:1:exon
so has part: feature:709755-709867:1:exon
so has part: feature:710016-710128:1:exon
so has part: feature:711092-711241:1:exon
so has part: feature:712415-713070:1:exon
so has part: feature:714127-714244:1:exon
so has part: feature:715672-715941:1:exon
so has part: feature:716984-720031:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:708939-708991:1:exon

position:708991:1
position: 708991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:709755-709867:1:exon

position:709755:1
position: 709755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:709867:1
position: 709867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:710016-710128:1:exon

position:710016:1
position: 710016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:710128:1
position: 710128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:711092-711241:1:exon

position:711092:1
position: 711092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:711241:1
position: 711241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:712415-713070:1:exon

position:712415:1
position: 712415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:713070:1
position: 713070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:714127-714244:1:exon

position:714127:1
position: 714127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:714244:1
position: 714244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:715672-715941:1:exon

position:715672:1
position: 715672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:715941:1
position: 715941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:716984-720031:1:exon

position:716984:1
position: 716984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

H6PD
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: H6PD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GDH/6PGL endoplasmic bifunctional protein
translation: MLGRVLCTVLFVGALPSPAGASQGHISVVLLGANGDLAKKYLWQGLFQLYMDQVSSGHSFTFHGAALAALEPGQRLMFDVLKKLSCPPGEAPNRCAVLKDQFLKLSQYHQLGSAEDYRALNREIETLLGQEGLQEAGRIFYLSVPPFAYTEIAGHINSSCRPRAGAWLRVVLEKPFGHDLQSAQQLAAELAGFFSEEEMYRVDHYLGKQAVAHILPFRDQNRQFLGPIWNRHHVERVEVVLKETVDAKGRTRFYEQYGVIRDVLQNHLTEALLFLIMELPANASSAQELVQRRLQALQALWGLQRSSAVLGQYQAYDSQVQQELREARGHVSTTPTFAGVLIHSQSPRWEGVPFLLTSGKALDERVGYARVLFKNRAYCPQSGTLRDAGHSQCKPKQIIFYFGHGALGAPAVLVSRNLFQPVMPKDSWREAGARSDLHLFGQPLSDFYVYSPVRERDAYSVVISNIYHGRKDFFIPVENLLASWAFWTPLLDSTSRQPPRLYPGGVENQQLLDFEMVPGGLAFTLAEPAELLHPGGQGPSDFRAVRSQFRQSPLVSAWAEELIARLASDMEEAAVRSVARSGQFHLALSGGSSPVGLFQRLARHHYGFPWQQSHVWLVDERCVPLTDSESNFLGLHRHLLQHVRVPYFNIHPMPVHLNRRLCVEEDGGAQLYAQDIAALVANASFDLVLLGVGTDGHTASLFPRSESGLEGAATVLLTESPAKPHQRMSFSLPLINRARQVFVLVLGKGKHDITTLLSRVGHEPRKWPISGVSPSSGQLVWYVDYEALLG
SIO_010081: H6PD
subclass of: SO_0000673
so part of: H6PD
location: join(712444..713070,714127..714244,715672..715941,716984..718341)
location: region:712444-718341:1
so has part: feature:712444-713070:1:exon
so has part: feature:714127-714244:1:exon
so has part: feature:715672-715941:1:exon
so has part: feature:716984-718341:1:exon

XP_002187325.4
type: Protein
SIO_000068: ncbiprotein

position:712444:1
position: 712444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:718341:1
position: 718341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:712444-713070:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:714127-714244:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:715672-715941:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:716984-718341:1:exon

SPSB1
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: SPSB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 722693..746477
location: region:722693-746477:1
so has part: feature:722693-746477:1:exon
subclass of: SO_0000010

100219402
type: Gene
SIO_000068: ncbigene

position:722693:1
position: 722693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:746477:1
position: 746477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:722693-746477:1:exon

SPSB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: SPSB1
product: splA/ryanodine receptor domain and SOCS box containing 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 53 samples with support for all annotated introns
transcript id: XM_030289187.3
SIO_010081: SPSB1
subclass of: SO_0000673
so part of: SPSB1
location: join(722693..722814,740613..741428,744550..746477)
location: region:722693-746477:1
so has part: feature:722693-722814:1:exon
so has part: feature:740613-741428:1:exon
so has part: feature:744550-746477:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:722693-722814:1:exon

position:722814:1
position: 722814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:740613-741428:1:exon

position:740613:1
position: 740613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:741428:1
position: 741428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:744550-746477:1:exon

position:744550:1
position: 744550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SPSB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: SPSB1
product: splA/ryanodine receptor domain and SOCS box containing 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_030289189.3
SIO_010081: SPSB1
subclass of: SO_0000673
so part of: SPSB1
location: join(731868..732550,740613..741428,744550..746477)
location: region:731868-746477:1
so has part: feature:731868-732550:1:exon
so has part: feature:740613-741428:1:exon
so has part: feature:744550-746477:1:exon

position:731868:1
position: 731868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:731868-732550:1:exon

position:732550:1
position: 732550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:740613-741428:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:744550-746477:1:exon

SPSB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: SPSB1
product: splA/ryanodine receptor domain and SOCS box containing 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 118 samples with support for all annotated introns
transcript id: XM_041720365.1
SIO_010081: SPSB1
subclass of: SO_0000673
so part of: SPSB1
location: join(739285..741428,744550..746477)
location: region:739285-746477:1
so has part: feature:739285-741428:1:exon
so has part: feature:744550-746477:1:exon

position:739285:1
position: 739285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:739285-741428:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:744550-746477:1:exon

SPSB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: SPSB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SPRY domain-containing SOCS box protein 1
translation: MGQKVTGGIKTVDMRDPVYRPLKQELQGLDYSKPTRLDLLLDMPPVSYEVQLLHSWNNDDRSLNVFVKEDDKLIFHRHPVAQSTDAIRGKVGYTRGLHVWQITWAMRQRGTHAVVGVATAEAPLHSVGYTTLVGNNHESWGWDLGRNRLYHDGKNQPSKTYPAFLEPDETFIVPDSFLVVLDMDDGTLSFIVDGQYMGVAFRGLKGKKLYPVVSAVWGHCEIRMCYLNGLDPEPLPLMDLCRRAVRLALGKDRLAQIPTLPLPASLKSYLLYQ
SIO_010081: SPSB1
subclass of: SO_0000673
so part of: SPSB1
location: join(740735..741428,744550..744677)
location: region:740735-744677:1
so has part: feature:740735-741428:1:exon
so has part: feature:744550-744677:1:exon

XP_030145047.1
type: Protein
SIO_000068: ncbiprotein

position:740735:1
position: 740735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:744677:1
position: 744677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:740735-741428:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:744550-744677:1:exon

SPSB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: SPSB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SPRY domain-containing SOCS box protein 1
translation: MGQKVTGGIKTVDMRDPVYRPLKQELQGLDYSKPTRLDLLLDMPPVSYEVQLLHSWNNDDRSLNVFVKEDDKLIFHRHPVAQSTDAIRGKVGYTRGLHVWQITWAMRQRGTHAVVGVATAEAPLHSVGYTTLVGNNHESWGWDLGRNRLYHDGKNQPSKTYPAFLEPDETFIVPDSFLVVLDMDDGTLSFIVDGQYMGVAFRGLKGKKLYPVVSAVWGHCEIRMCYLNGLDPEPLPLMDLCRRAVRLALGKDRLAQIPTLPLPASLKSYLLYQ
SIO_010081: SPSB1
subclass of: SO_0000673
so part of: SPSB1
location: join(740735..741428,744550..744677)
location: region:740735-744677:1
so has part: feature:740735-741428:1:exon
so has part: feature:744550-744677:1:exon

XP_030145049.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:740735-741428:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:744550-744677:1:exon

SPSB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: SPSB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SPRY domain-containing SOCS box protein 1
translation: MGQKVTGGIKTVDMRDPVYRPLKQELQGLDYSKPTRLDLLLDMPPVSYEVQLLHSWNNDDRSLNVFVKEDDKLIFHRHPVAQSTDAIRGKVGYTRGLHVWQITWAMRQRGTHAVVGVATAEAPLHSVGYTTLVGNNHESWGWDLGRNRLYHDGKNQPSKTYPAFLEPDETFIVPDSFLVVLDMDDGTLSFIVDGQYMGVAFRGLKGKKLYPVVSAVWGHCEIRMCYLNGLDPEPLPLMDLCRRAVRLALGKDRLAQIPTLPLPASLKSYLLYQ
SIO_010081: SPSB1
subclass of: SO_0000673
so part of: SPSB1
location: join(740735..741428,744550..744677)
location: region:740735-744677:1
so has part: feature:740735-741428:1:exon
so has part: feature:744550-744677:1:exon

XP_041576299.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:740735-741428:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:744550-744677:1:exon

SLC25A33
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: SLC25A33
note: solute carrier family 25 member 33; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: 767746..780678
location: region:767746-780678:1
so has part: feature:767746-780678:1:exon
subclass of: SO_0000010

100190678
type: Gene
SIO_000068: ncbigene

position:767746:1
position: 767746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:780678:1
position: 780678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:767746-780678:1:exon

SLC25A33
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: SLC25A33
product: solute carrier family 25 member 33
inference: similar to RNA sequence, mRNA (same species):RefSeq:NM_001245719.1
exception: annotated by transcript or proteomic data
note: The RefSeq transcript has 4 substitutions, 3 non-frameshifting indels compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001245719.1
SIO_010081: SLC25A33
subclass of: SO_0000673
so part of: SLC25A33
location: join(767746..767837,773395..773574,775798..775875,776977..777077,777845..777911,779242..779522,780138..780678)
location: region:767746-780678:1
so has part: feature:767746-767837:1:exon
so has part: feature:773395-773574:1:exon
so has part: feature:775798-775875:1:exon
so has part: feature:776977-777077:1:exon
so has part: feature:777845-777911:1:exon
so has part: feature:779242-779522:1:exon
so has part: feature:780138-780678:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:767746-767837:1:exon

position:767837:1
position: 767837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:773395-773574:1:exon

position:773395:1
position: 773395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:773574:1
position: 773574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:775798-775875:1:exon

position:775798:1
position: 775798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:775875:1
position: 775875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:776977-777077:1:exon

position:776977:1
position: 776977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:777077:1
position: 777077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:777845-777911:1:exon

position:777845:1
position: 777845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:777911:1
position: 777911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:779242-779522:1:exon

position:779242:1
position: 779242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:779522:1
position: 779522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:780138-780678:1:exon

position:780138:1
position: 780138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SLC25A33
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: SLC25A33
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: solute carrier family 25 member 33
translation: MAGGPQENTLLHLFAGGCGGTVGAIFTCPLEVIKTRLQSSKLAFRTVYYPQVQLGTISGEGMVRPTSVSPGLFSVLKSILEKEGPRSLFRGLGPNLVGVAPSRAVYFACYSKAKEQFNSMFVPNSNIVHICSAGSAAFITNSLMNPIWMVKTRMQLERKVRGSKPMNALQCARYVYQTEGVRGFYRGLTASYAGISETIICFAIYESLKKHLKEVQLPPSSNGTERTSTSFFGLMIAAAVSKGCASCIAYPHEVIRTRLREEGTKYKAFVQTARLVAREEGYLAFYRGLFAQLIRQIPNTAIVLSTYELIVYLLEEHAK
SIO_010081: SLC25A33
subclass of: SO_0000673
so part of: SLC25A33
location: join(767788..767837,773395..773574,775798..775875,776977..777077,777845..777911,779242..779522,780138..780340)
location: region:767788-780340:1
so has part: feature:767788-767837:1:exon
so has part: feature:773395-773574:1:exon
so has part: feature:775798-775875:1:exon
so has part: feature:776977-777077:1:exon
so has part: feature:777845-777911:1:exon
so has part: feature:779242-779522:1:exon
so has part: feature:780138-780340:1:exon

NP_001232648.1
type: Protein
SIO_000068: ncbiprotein

position:767788:1
position: 767788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:780340:1
position: 780340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:767788-767837:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:773395-773574:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:775798-775875:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:776977-777077:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:777845-777911:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:779242-779522:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:780138-780340:1:exon

TMEM201
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: TMEM201
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 784483..807746
location: region:784483-807746:1
so has part: feature:784483-807746:1:exon
subclass of: SO_0000010

100230881
type: Gene
SIO_000068: ncbigene

position:784483:1
position: 784483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:807746:1
position: 807746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:784483-807746:1:exon

TMEM201
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: TMEM201
product: transmembrane protein 201
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 long SRA read, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 61 samples with support for all annotated introns
transcript id: XM_030289114.3
SIO_010081: TMEM201
subclass of: SO_0000673
so part of: TMEM201
location: join(784483..784619,790349..790469,791008..791202,792611..792787,793381..793760,794110..794313,801257..801474,801866..801937,802719..803000,803117..803248,803664..807746)
location: region:784483-807746:1
so has part: feature:784483-784619:1:exon
so has part: feature:790349-790469:1:exon
so has part: feature:791008-791202:1:exon
so has part: feature:792611-792787:1:exon
so has part: feature:793381-793760:1:exon
so has part: feature:794110-794313:1:exon
so has part: feature:801257-801474:1:exon
so has part: feature:801866-801937:1:exon
so has part: feature:802719-803000:1:exon
so has part: feature:803117-803248:1:exon
so has part: feature:803664-807746:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:784483-784619:1:exon

position:784619:1
position: 784619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:790349-790469:1:exon

position:790349:1
position: 790349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:790469:1
position: 790469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:791008-791202:1:exon

position:791008:1
position: 791008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:791202:1
position: 791202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:792611-792787:1:exon

position:792611:1
position: 792611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:792787:1
position: 792787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:793381-793760:1:exon

position:793381:1
position: 793381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:793760:1
position: 793760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:794110-794313:1:exon

position:794110:1
position: 794110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:794313:1
position: 794313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:801257-801474:1:exon

position:801257:1
position: 801257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:801474:1
position: 801474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:801866-801937:1:exon

position:801866:1
position: 801866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:801937:1
position: 801937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:802719-803000:1:exon

position:802719:1
position: 802719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:803000:1
position: 803000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:803117-803248:1:exon

position:803117:1
position: 803117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:803248:1
position: 803248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:803664-807746:1:exon

position:803664:1
position: 803664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TMEM201
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: TMEM201
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 201
translation: MDGAGLGATACAAAAGLLLYRIARRKKPTHVTVNCWFCNQDTVVPYGNRNCWDCPNCEQYNGFQENGDYNKPIPAQYMEHLNHVVSGSPTFCDPTKPQQWVSSQILLCKKCNNHQTMKIKQLASFSPREEGKYDEEIEVYKHHLEQTYKLCRPCQAAVEYYIKHQNRQLRALLLSHHFRRRETDKSYTQNLCSSSSSTSITTPAQVILLRFLAFLSCAFLVLMAWYGSGDPFSLSTAVPAAVPSGPAPVRNRTRGDGDGGGGSSGRGWPELLRLLPERLLESLSAAWAYGKNHQMAVAVLGLFTCLLAMFLAGRIRLRRIDAFASVLWFGVMSLHLAERYLKTETPSWLDTAKFGTTSLCCLVGFTAAVATRKSTGQRRFRPRRFLSGDSMTVFPSSPGTAFPSPASSLFVPTPPSILHLTNQQLFRSPRRTASSSLPGRLNRALSLGTIPSLARADSGYLFSGSRPASQSSQSKEFPTSDPFWLPAGSRAPSRLPSPAPSVAGSVTSSSGSLRVRRPLISPARLNLQGQKLLLFPAQSEALLSPGGSEEQTHSDSNASAPELPGCPGKSLGVPDMRSAVEGGSIWSDNSIKKEDHSSHSSTCVVDTTTKGDDLGGWRGRFGTSALRGLLAVSLTLNAVFTSAYVYRSLR
SIO_010081: TMEM201
subclass of: SO_0000673
so part of: TMEM201
location: join(784546..784619,790349..790469,791008..791202,792611..792787,793381..793760,794110..794313,801257..801474,801866..801937,802719..803000,803117..803248,803664..803761)
location: region:784546-803761:1
so has part: feature:784546-784619:1:exon
so has part: feature:790349-790469:1:exon
so has part: feature:791008-791202:1:exon
so has part: feature:792611-792787:1:exon
so has part: feature:793381-793760:1:exon
so has part: feature:794110-794313:1:exon
so has part: feature:801257-801474:1:exon
so has part: feature:801866-801937:1:exon
so has part: feature:802719-803000:1:exon
so has part: feature:803117-803248:1:exon
so has part: feature:803664-803761:1:exon

XP_030144974.3
type: Protein
SIO_000068: ncbiprotein

position:784546:1
position: 784546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:803761:1
position: 803761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:784546-784619:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:790349-790469:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:791008-791202:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:792611-792787:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:793381-793760:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:794110-794313:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:801257-801474:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:801866-801937:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:802719-803000:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:803117-803248:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:803664-803761:1:exon

LOC101233936
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC101233936
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 808253..>808717
location: region:808253-808717:1
so has part: feature:808253-808717:1:exon
subclass of: SO_0000010

101233936
type: Gene
SIO_000068: ncbigene

position:808253:1
position: 808253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:808717:1
position: 808717
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:808253-808717:1:exon

LOC101233936
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC101233936
product: forkhead box protein D4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032752202.2
SIO_010081: LOC101233936
subclass of: SO_0000673
so part of: LOC101233936
location: 808253..>808717
location: region:808253-808717:1
so has part: feature:808253-808717:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:808253-808717:1:exon

LOC101233936
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC101233936
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: forkhead box protein D4-like
translation: MAETDPGERRAVGTERGTERGTGPGTAGWPQRPPYSFVALITMAIRASPEQRLSLSGIYAYIAERFPFYRGRGRQWQNSVRHNLSLNPCFRRLPGRHGRAGEWALDPAFQDMFPGGNYLRRRRRLCRRPSASPPPPPGT
SIO_010081: LOC101233936
subclass of: SO_0000673
so part of: LOC101233936
location: 808301..>808717
location: region:808301-808717:1
so has part: feature:808301-808717:1:exon

XP_032608093.2
type: Protein
SIO_000068: ncbiprotein

position:808301:1
position: 808301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:808301-808717:1:exon

PIK3CD
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: PIK3CD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 811904..847929
location: region:811904-847929:1
so has part: feature:811904-847929:1:exon
subclass of: SO_0000010

100224188
type: Gene
SIO_000068: ncbigene

position:811904:1
position: 811904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:847929:1
position: 847929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:811904-847929:1:exon

PIK3CD
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: PIK3CD
product: phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 29 ESTs, 5 long SRA reads, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_032752101.2
SIO_010081: PIK3CD
subclass of: SO_0000673
so part of: PIK3CD
location: join(811904..811928,829553..829626,829988..830151,831032..831260,832284..832513,833288..833467,834054..834203,834499..834588,835376..835597,838388..838484,838789..838919,839504..839563,839728..839895,840367..840488,840640..840783,841347..841446,842061..842239,842437..842546,842789..842867,843106..843273,843591..843714,843877..844022,844232..844364,844885..847929)
location: region:811904-847929:1
so has part: feature:811904-811928:1:exon
so has part: feature:829553-829626:1:exon
so has part: feature:829988-830151:1:exon
so has part: feature:831032-831260:1:exon
so has part: feature:832284-832513:1:exon
so has part: feature:833288-833467:1:exon
so has part: feature:834054-834203:1:exon
so has part: feature:834499-834588:1:exon
so has part: feature:835376-835597:1:exon
so has part: feature:838388-838484:1:exon
so has part: feature:838789-838919:1:exon
so has part: feature:839504-839563:1:exon
so has part: feature:839728-839895:1:exon
so has part: feature:840367-840488:1:exon
so has part: feature:840640-840783:1:exon
so has part: feature:841347-841446:1:exon
so has part: feature:842061-842239:1:exon
so has part: feature:842437-842546:1:exon
so has part: feature:842789-842867:1:exon
so has part: feature:843106-843273:1:exon
so has part: feature:843591-843714:1:exon
so has part: feature:843877-844022:1:exon
so has part: feature:844232-844364:1:exon
so has part: feature:844885-847929:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:811904-811928:1:exon

position:811928:1
position: 811928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:829553-829626:1:exon

position:829553:1
position: 829553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:829626:1
position: 829626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:829988-830151:1:exon

position:829988:1
position: 829988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:830151:1
position: 830151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:831032-831260:1:exon

position:831032:1
position: 831032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:831260:1
position: 831260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:832284-832513:1:exon

position:832284:1
position: 832284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:832513:1
position: 832513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:833288-833467:1:exon

position:833288:1
position: 833288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:833467:1
position: 833467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:834054-834203:1:exon

position:834054:1
position: 834054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:834203:1
position: 834203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:834499-834588:1:exon

position:834499:1
position: 834499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:834588:1
position: 834588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:835376-835597:1:exon

position:835376:1
position: 835376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:835597:1
position: 835597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:838388-838484:1:exon

position:838388:1
position: 838388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:838484:1
position: 838484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:838789-838919:1:exon

position:838789:1
position: 838789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:838919:1
position: 838919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:839504-839563:1:exon

position:839504:1
position: 839504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:839563:1
position: 839563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:839728-839895:1:exon

position:839728:1
position: 839728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:839895:1
position: 839895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:840367-840488:1:exon

position:840367:1
position: 840367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:840488:1
position: 840488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:840640-840783:1:exon

position:840640:1
position: 840640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:840783:1
position: 840783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:841347-841446:1:exon

position:841347:1
position: 841347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:841446:1
position: 841446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:842061-842239:1:exon

position:842061:1
position: 842061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:842239:1
position: 842239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:842437-842546:1:exon

position:842437:1
position: 842437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:842546:1
position: 842546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:842789-842867:1:exon

position:842789:1
position: 842789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:842867:1
position: 842867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:843106-843273:1:exon

position:843106:1
position: 843106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:843273:1
position: 843273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:843591-843714:1:exon

position:843591:1
position: 843591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:843714:1
position: 843714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:843877-844022:1:exon

position:843877:1
position: 843877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:844022:1
position: 844022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:844232-844364:1:exon

position:844232:1
position: 844232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:844364:1
position: 844364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:844885-847929:1:exon

position:844885:1
position: 844885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PIK3CD
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: PIK3CD
product: phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 29 ESTs, 8 long SRA reads, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_030289244.3
SIO_010081: PIK3CD
subclass of: SO_0000673
so part of: PIK3CD
location: join(824103..824188,826622..827156,829553..829626,829988..830151,831032..831260,832284..832513,833288..833467,834054..834203,834499..834588,835376..835597,838388..838484,838789..838919,839504..839563,839728..839895,840367..840488,840640..840783,841347..841446,842061..842239,842437..842546,842789..842867,843106..843273,843591..843714,843877..844022,844232..844364,844885..847929)
location: region:824103-847929:1
so has part: feature:824103-824188:1:exon
so has part: feature:826622-827156:1:exon
so has part: feature:829553-829626:1:exon
so has part: feature:829988-830151:1:exon
so has part: feature:831032-831260:1:exon
so has part: feature:832284-832513:1:exon
so has part: feature:833288-833467:1:exon
so has part: feature:834054-834203:1:exon
so has part: feature:834499-834588:1:exon
so has part: feature:835376-835597:1:exon
so has part: feature:838388-838484:1:exon
so has part: feature:838789-838919:1:exon
so has part: feature:839504-839563:1:exon
so has part: feature:839728-839895:1:exon
so has part: feature:840367-840488:1:exon
so has part: feature:840640-840783:1:exon
so has part: feature:841347-841446:1:exon
so has part: feature:842061-842239:1:exon
so has part: feature:842437-842546:1:exon
so has part: feature:842789-842867:1:exon
so has part: feature:843106-843273:1:exon
so has part: feature:843591-843714:1:exon
so has part: feature:843877-844022:1:exon
so has part: feature:844232-844364:1:exon
so has part: feature:844885-847929:1:exon

position:824103:1
position: 824103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:824103-824188:1:exon

position:824188:1
position: 824188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:826622-827156:1:exon

position:826622:1
position: 826622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:827156:1
position: 827156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:829553-829626:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:829988-830151:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:831032-831260:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:832284-832513:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:833288-833467:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:834054-834203:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:834499-834588:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:835376-835597:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:838388-838484:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:838789-838919:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:839504-839563:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:839728-839895:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:840367-840488:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:840640-840783:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:841347-841446:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:842061-842239:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:842437-842546:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:842789-842867:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:843106-843273:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:843591-843714:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:843877-844022:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:844232-844364:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:844885-847929:1:exon

PIK3CD
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: PIK3CD
product: phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 30 ESTs, 7 long SRA reads, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
transcript id: XM_030289241.3
SIO_010081: PIK3CD
subclass of: SO_0000673
so part of: PIK3CD
location: join(824112..824188,826622..826741,829553..829626,829988..830151,831032..831260,832284..832513,833288..833467,834054..834203,834499..834588,835376..835597,838388..838484,838789..838919,839504..839563,839728..839895,840367..840488,840640..840783,841347..841446,842061..842239,842437..842546,842789..842867,843106..843273,843591..843714,843877..844022,844232..844364,844885..847929)
location: region:824112-847929:1
so has part: feature:824112-824188:1:exon
so has part: feature:826622-826741:1:exon
so has part: feature:829553-829626:1:exon
so has part: feature:829988-830151:1:exon
so has part: feature:831032-831260:1:exon
so has part: feature:832284-832513:1:exon
so has part: feature:833288-833467:1:exon
so has part: feature:834054-834203:1:exon
so has part: feature:834499-834588:1:exon
so has part: feature:835376-835597:1:exon
so has part: feature:838388-838484:1:exon
so has part: feature:838789-838919:1:exon
so has part: feature:839504-839563:1:exon
so has part: feature:839728-839895:1:exon
so has part: feature:840367-840488:1:exon
so has part: feature:840640-840783:1:exon
so has part: feature:841347-841446:1:exon
so has part: feature:842061-842239:1:exon
so has part: feature:842437-842546:1:exon
so has part: feature:842789-842867:1:exon
so has part: feature:843106-843273:1:exon
so has part: feature:843591-843714:1:exon
so has part: feature:843877-844022:1:exon
so has part: feature:844232-844364:1:exon
so has part: feature:844885-847929:1:exon

position:824112:1
position: 824112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:824112-824188:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:826622-826741:1:exon

position:826741:1
position: 826741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:829553-829626:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:829988-830151:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:831032-831260:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:832284-832513:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:833288-833467:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:834054-834203:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:834499-834588:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:835376-835597:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:838388-838484:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:838789-838919:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:839504-839563:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:839728-839895:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:840367-840488:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:840640-840783:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:841347-841446:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:842061-842239:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:842437-842546:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:842789-842867:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:843106-843273:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:843591-843714:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:843877-844022:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:844232-844364:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:844885-847929:1:exon

PIK3CD
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: PIK3CD
product: phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 30 ESTs, 9 long SRA reads, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 57 samples with support for all annotated introns
transcript id: XM_030289243.3
SIO_010081: PIK3CD
subclass of: SO_0000673
so part of: PIK3CD
location: join(824118..824188,829553..829626,829988..830151,831032..831260,832284..832513,833288..833467,834054..834203,834499..834588,835376..835597,838388..838484,838789..838919,839504..839563,839728..839895,840367..840488,840640..840783,841347..841446,842061..842239,842437..842546,842789..842867,843106..843273,843591..843714,843877..844022,844232..844364,844885..847929)
location: region:824118-847929:1
so has part: feature:824118-824188:1:exon
so has part: feature:829553-829626:1:exon
so has part: feature:829988-830151:1:exon
so has part: feature:831032-831260:1:exon
so has part: feature:832284-832513:1:exon
so has part: feature:833288-833467:1:exon
so has part: feature:834054-834203:1:exon
so has part: feature:834499-834588:1:exon
so has part: feature:835376-835597:1:exon
so has part: feature:838388-838484:1:exon
so has part: feature:838789-838919:1:exon
so has part: feature:839504-839563:1:exon
so has part: feature:839728-839895:1:exon
so has part: feature:840367-840488:1:exon
so has part: feature:840640-840783:1:exon
so has part: feature:841347-841446:1:exon
so has part: feature:842061-842239:1:exon
so has part: feature:842437-842546:1:exon
so has part: feature:842789-842867:1:exon
so has part: feature:843106-843273:1:exon
so has part: feature:843591-843714:1:exon
so has part: feature:843877-844022:1:exon
so has part: feature:844232-844364:1:exon
so has part: feature:844885-847929:1:exon

position:824118:1
position: 824118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:824118-824188:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:829553-829626:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:829988-830151:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:831032-831260:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:832284-832513:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:833288-833467:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:834054-834203:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:834499-834588:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:835376-835597:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:838388-838484:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:838789-838919:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:839504-839563:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:839728-839895:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:840367-840488:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:840640-840783:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:841347-841446:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:842061-842239:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:842437-842546:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:842789-842867:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:843106-843273:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:843591-843714:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:843877-844022:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:844232-844364:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:844885-847929:1:exon

PIK3CD
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: PIK3CD
product: phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 29 ESTs, 5 long SRA reads, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 64 samples with support for all annotated introns
transcript id: XM_030289242.3
SIO_010081: PIK3CD
subclass of: SO_0000673
so part of: PIK3CD
location: join(824645..826741,829553..829626,829988..830151,831032..831260,832284..832513,833288..833467,834054..834203,834499..834588,835376..835597,838388..838484,838789..838919,839504..839563,839728..839895,840367..840488,840640..840783,841347..841446,842061..842239,842437..842546,842789..842867,843106..843273,843591..843714,843877..844022,844232..844364,844885..847929)
location: region:824645-847929:1
so has part: feature:824645-826741:1:exon
so has part: feature:829553-829626:1:exon
so has part: feature:829988-830151:1:exon
so has part: feature:831032-831260:1:exon
so has part: feature:832284-832513:1:exon
so has part: feature:833288-833467:1:exon
so has part: feature:834054-834203:1:exon
so has part: feature:834499-834588:1:exon
so has part: feature:835376-835597:1:exon
so has part: feature:838388-838484:1:exon
so has part: feature:838789-838919:1:exon
so has part: feature:839504-839563:1:exon
so has part: feature:839728-839895:1:exon
so has part: feature:840367-840488:1:exon
so has part: feature:840640-840783:1:exon
so has part: feature:841347-841446:1:exon
so has part: feature:842061-842239:1:exon
so has part: feature:842437-842546:1:exon
so has part: feature:842789-842867:1:exon
so has part: feature:843106-843273:1:exon
so has part: feature:843591-843714:1:exon
so has part: feature:843877-844022:1:exon
so has part: feature:844232-844364:1:exon
so has part: feature:844885-847929:1:exon

position:824645:1
position: 824645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:824645-826741:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:829553-829626:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:829988-830151:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:831032-831260:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:832284-832513:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:833288-833467:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:834054-834203:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:834499-834588:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:835376-835597:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:838388-838484:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:838789-838919:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:839504-839563:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:839728-839895:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:840367-840488:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:840640-840783:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:841347-841446:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:842061-842239:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:842437-842546:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:842789-842867:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:843106-843273:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:843591-843714:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:843877-844022:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:844232-844364:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:844885-847929:1:exon

PIK3CD
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: PIK3CD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform
translation: MPPGIYCPTEFWSKGENQNIQVDFLLPTGIYLNLSVPCNASLGTIKQVLWKHAQYEPLFHMLSDPEAYVFTCINQTAEQQELEDEQRRLCDIQPFLPVLRLVAREGDRAKKVINSQISLLIGKGLHEFDSVQDPEVSDFRTKMCQFCEEKAAKRQQLSWAAWMEYNFPLQLEPVAKGLGVGSLQIPTKNIFVNIKFQSGGESFTFQISPWEFPITLMSYAIKKQATVFRHETVQKPEDYTLQVNGKCEYLYGNYPLYQFQHIRSCLQRGRTPHLTMVHSSAIIAMRDEQTNGITSPPKAAPKPPPLPKKKPNYGSLWSLEQPFYIELVQGSKVNADERMKLVVQAGLFHGTEMLCKTVSSSEVSVCSEPVWRQRLDFDISVCDLPRMARLCLALYAVVEKAKKARSTKKKSKKADCPIAWVNVMLFDYKDQLKTGECCLHMWSSFPDEKGELLNPMGTVQCNPNTESAAALVICFPSVAAHPVYYPSFEQLLELGRNGEQPRAAPEDSEEKLQLREILERRSHTELYEHEKDLVWKMRYDIRDQYPQALAKLLVITKWNKHEDVAQMISLLQTWPELPVLNALELLDFSFPDRYVGSFAVNSLKKLTDDDVFQYLLQLVQVLKYESYLDCELTKFLLERALSNRKIGHFLFWHLRSEMHVPAVALRFGLILEAYCRGSTHHMKVLMKQGEALNKMKALNDFVKVSSQKATKPQTKEMMHMCMKQETYREALSHLQNPLNPNIILAEVCVDQCTFMDSKMKPLWIVFNNEETGGGGVGIIFKNGDDLRQDMLTLQMIQLMDILWKQEGLDLRMTPYGCLSTGDKTGLIEVVMHSDTIANIQLNKSNMVATAAFNKDALLNWLKSKNPGDALDQAIEEFTLSCAGYCVATYVLGIGDRHSDNIMVRETGQLFHIDFGHFLGNFKTKFGINRERVPFILTYDFVHVIQQGKTNNNEKFERFRGYCERAYMILRRHGLLFLHLFALMKAAGLPELSCSKDIQYLKDSLALGKTDEEALKHFRVKFNEALRESWKTKVNWLAHNVSKDNRQ
SIO_010081: PIK3CD
subclass of: SO_0000673
so part of: PIK3CD
location: join(830011..830151,831032..831260,832284..832513,833288..833467,834054..834203,834499..834588,835376..835597,838388..838484,838789..838919,839504..839563,839728..839895,840367..840488,840640..840783,841347..841446,842061..842239,842437..842546,842789..842867,843106..843273,843591..843714,843877..844022,844232..844364,844885..845022)
location: region:830011-845022:1
so has part: feature:830011-830151:1:exon
so has part: feature:831032-831260:1:exon
so has part: feature:832284-832513:1:exon
so has part: feature:833288-833467:1:exon
so has part: feature:834054-834203:1:exon
so has part: feature:834499-834588:1:exon
so has part: feature:835376-835597:1:exon
so has part: feature:838388-838484:1:exon
so has part: feature:838789-838919:1:exon
so has part: feature:839504-839563:1:exon
so has part: feature:839728-839895:1:exon
so has part: feature:840367-840488:1:exon
so has part: feature:840640-840783:1:exon
so has part: feature:841347-841446:1:exon
so has part: feature:842061-842239:1:exon
so has part: feature:842437-842546:1:exon
so has part: feature:842789-842867:1:exon
so has part: feature:843106-843273:1:exon
so has part: feature:843591-843714:1:exon
so has part: feature:843877-844022:1:exon
so has part: feature:844232-844364:1:exon
so has part: feature:844885-845022:1:exon

XP_030145101.3
type: Protein
SIO_000068: ncbiprotein

position:830011:1
position: 830011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:845022:1
position: 845022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:830011-830151:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:831032-831260:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:832284-832513:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:833288-833467:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:834054-834203:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:834499-834588:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:835376-835597:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:838388-838484:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:838789-838919:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:839504-839563:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:839728-839895:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:840367-840488:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:840640-840783:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:841347-841446:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:842061-842239:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:842437-842546:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:842789-842867:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:843106-843273:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:843591-843714:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:843877-844022:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:844232-844364:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:844885-845022:1:exon

PIK3CD
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: PIK3CD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform
translation: MPPGIYCPTEFWSKGENQNIQVDFLLPTGIYLNLSVPCNASLGTIKQVLWKHAQYEPLFHMLSDPEAYVFTCINQTAEQQELEDEQRRLCDIQPFLPVLRLVAREGDRAKKVINSQISLLIGKGLHEFDSVQDPEVSDFRTKMCQFCEEKAAKRQQLSWAAWMEYNFPLQLEPVAKGLGVGSLQIPTKNIFVNIKFQSGGESFTFQISPWEFPITLMSYAIKKQATVFRHETVQKPEDYTLQVNGKCEYLYGNYPLYQFQHIRSCLQRGRTPHLTMVHSSAIIAMRDEQTNGITSPPKAAPKPPPLPKKKPNYGSLWSLEQPFYIELVQGSKVNADERMKLVVQAGLFHGTEMLCKTVSSSEVSVCSEPVWRQRLDFDISVCDLPRMARLCLALYAVVEKAKKARSTKKKSKKADCPIAWVNVMLFDYKDQLKTGECCLHMWSSFPDEKGELLNPMGTVQCNPNTESAAALVICFPSVAAHPVYYPSFEQLLELGRNGEQPRAAPEDSEEKLQLREILERRSHTELYEHEKDLVWKMRYDIRDQYPQALAKLLVITKWNKHEDVAQMISLLQTWPELPVLNALELLDFSFPDRYVGSFAVNSLKKLTDDDVFQYLLQLVQVLKYESYLDCELTKFLLERALSNRKIGHFLFWHLRSEMHVPAVALRFGLILEAYCRGSTHHMKVLMKQGEALNKMKALNDFVKVSSQKATKPQTKEMMHMCMKQETYREALSHLQNPLNPNIILAEVCVDQCTFMDSKMKPLWIVFNNEETGGGGVGIIFKNGDDLRQDMLTLQMIQLMDILWKQEGLDLRMTPYGCLSTGDKTGLIEVVMHSDTIANIQLNKSNMVATAAFNKDALLNWLKSKNPGDALDQAIEEFTLSCAGYCVATYVLGIGDRHSDNIMVRETGQLFHIDFGHFLGNFKTKFGINRERVPFILTYDFVHVIQQGKTNNNEKFERFRGYCERAYMILRRHGLLFLHLFALMKAAGLPELSCSKDIQYLKDSLALGKTDEEALKHFRVKFNEALRESWKTKVNWLAHNVSKDNRQ
SIO_010081: PIK3CD
subclass of: SO_0000673
so part of: PIK3CD
location: join(830011..830151,831032..831260,832284..832513,833288..833467,834054..834203,834499..834588,835376..835597,838388..838484,838789..838919,839504..839563,839728..839895,840367..840488,840640..840783,841347..841446,842061..842239,842437..842546,842789..842867,843106..843273,843591..843714,843877..844022,844232..844364,844885..845022)
location: region:830011-845022:1
so has part: feature:830011-830151:1:exon
so has part: feature:831032-831260:1:exon
so has part: feature:832284-832513:1:exon
so has part: feature:833288-833467:1:exon
so has part: feature:834054-834203:1:exon
so has part: feature:834499-834588:1:exon
so has part: feature:835376-835597:1:exon
so has part: feature:838388-838484:1:exon
so has part: feature:838789-838919:1:exon
so has part: feature:839504-839563:1:exon
so has part: feature:839728-839895:1:exon
so has part: feature:840367-840488:1:exon
so has part: feature:840640-840783:1:exon
so has part: feature:841347-841446:1:exon
so has part: feature:842061-842239:1:exon
so has part: feature:842437-842546:1:exon
so has part: feature:842789-842867:1:exon
so has part: feature:843106-843273:1:exon
so has part: feature:843591-843714:1:exon
so has part: feature:843877-844022:1:exon
so has part: feature:844232-844364:1:exon
so has part: feature:844885-845022:1:exon

XP_030145103.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:830011-830151:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:831032-831260:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:832284-832513:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:833288-833467:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:834054-834203:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:834499-834588:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:835376-835597:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:838388-838484:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:838789-838919:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:839504-839563:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:839728-839895:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:840367-840488:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:840640-840783:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:841347-841446:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:842061-842239:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:842437-842546:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:842789-842867:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:843106-843273:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:843591-843714:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:843877-844022:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:844232-844364:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:844885-845022:1:exon

PIK3CD
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: PIK3CD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform
translation: MPPGIYCPTEFWSKGENQNIQVDFLLPTGIYLNLSVPCNASLGTIKQVLWKHAQYEPLFHMLSDPEAYVFTCINQTAEQQELEDEQRRLCDIQPFLPVLRLVAREGDRAKKVINSQISLLIGKGLHEFDSVQDPEVSDFRTKMCQFCEEKAAKRQQLSWAAWMEYNFPLQLEPVAKGLGVGSLQIPTKNIFVNIKFQSGGESFTFQISPWEFPITLMSYAIKKQATVFRHETVQKPEDYTLQVNGKCEYLYGNYPLYQFQHIRSCLQRGRTPHLTMVHSSAIIAMRDEQTNGITSPPKAAPKPPPLPKKKPNYGSLWSLEQPFYIELVQGSKVNADERMKLVVQAGLFHGTEMLCKTVSSSEVSVCSEPVWRQRLDFDISVCDLPRMARLCLALYAVVEKAKKARSTKKKSKKADCPIAWVNVMLFDYKDQLKTGECCLHMWSSFPDEKGELLNPMGTVQCNPNTESAAALVICFPSVAAHPVYYPSFEQLLELGRNGEQPRAAPEDSEEKLQLREILERRSHTELYEHEKDLVWKMRYDIRDQYPQALAKLLVITKWNKHEDVAQMISLLQTWPELPVLNALELLDFSFPDRYVGSFAVNSLKKLTDDDVFQYLLQLVQVLKYESYLDCELTKFLLERALSNRKIGHFLFWHLRSEMHVPAVALRFGLILEAYCRGSTHHMKVLMKQGEALNKMKALNDFVKVSSQKATKPQTKEMMHMCMKQETYREALSHLQNPLNPNIILAEVCVDQCTFMDSKMKPLWIVFNNEETGGGGVGIIFKNGDDLRQDMLTLQMIQLMDILWKQEGLDLRMTPYGCLSTGDKTGLIEVVMHSDTIANIQLNKSNMVATAAFNKDALLNWLKSKNPGDALDQAIEEFTLSCAGYCVATYVLGIGDRHSDNIMVRETGQLFHIDFGHFLGNFKTKFGINRERVPFILTYDFVHVIQQGKTNNNEKFERFRGYCERAYMILRRHGLLFLHLFALMKAAGLPELSCSKDIQYLKDSLALGKTDEEALKHFRVKFNEALRESWKTKVNWLAHNVSKDNRQ
SIO_010081: PIK3CD
subclass of: SO_0000673
so part of: PIK3CD
location: join(830011..830151,831032..831260,832284..832513,833288..833467,834054..834203,834499..834588,835376..835597,838388..838484,838789..838919,839504..839563,839728..839895,840367..840488,840640..840783,841347..841446,842061..842239,842437..842546,842789..842867,843106..843273,843591..843714,843877..844022,844232..844364,844885..845022)
location: region:830011-845022:1
so has part: feature:830011-830151:1:exon
so has part: feature:831032-831260:1:exon
so has part: feature:832284-832513:1:exon
so has part: feature:833288-833467:1:exon
so has part: feature:834054-834203:1:exon
so has part: feature:834499-834588:1:exon
so has part: feature:835376-835597:1:exon
so has part: feature:838388-838484:1:exon
so has part: feature:838789-838919:1:exon
so has part: feature:839504-839563:1:exon
so has part: feature:839728-839895:1:exon
so has part: feature:840367-840488:1:exon
so has part: feature:840640-840783:1:exon
so has part: feature:841347-841446:1:exon
so has part: feature:842061-842239:1:exon
so has part: feature:842437-842546:1:exon
so has part: feature:842789-842867:1:exon
so has part: feature:843106-843273:1:exon
so has part: feature:843591-843714:1:exon
so has part: feature:843877-844022:1:exon
so has part: feature:844232-844364:1:exon
so has part: feature:844885-845022:1:exon

XP_030145104.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:830011-830151:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:831032-831260:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:832284-832513:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:833288-833467:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:834054-834203:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:834499-834588:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:835376-835597:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:838388-838484:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:838789-838919:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:839504-839563:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:839728-839895:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:840367-840488:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:840640-840783:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:841347-841446:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:842061-842239:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:842437-842546:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:842789-842867:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:843106-843273:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:843591-843714:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:843877-844022:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:844232-844364:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:844885-845022:1:exon

PIK3CD
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: PIK3CD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform
translation: MPPGIYCPTEFWSKGENQNIQVDFLLPTGIYLNLSVPCNASLGTIKQVLWKHAQYEPLFHMLSDPEAYVFTCINQTAEQQELEDEQRRLCDIQPFLPVLRLVAREGDRAKKVINSQISLLIGKGLHEFDSVQDPEVSDFRTKMCQFCEEKAAKRQQLSWAAWMEYNFPLQLEPVAKGLGVGSLQIPTKNIFVNIKFQSGGESFTFQISPWEFPITLMSYAIKKQATVFRHETVQKPEDYTLQVNGKCEYLYGNYPLYQFQHIRSCLQRGRTPHLTMVHSSAIIAMRDEQTNGITSPPKAAPKPPPLPKKKPNYGSLWSLEQPFYIELVQGSKVNADERMKLVVQAGLFHGTEMLCKTVSSSEVSVCSEPVWRQRLDFDISVCDLPRMARLCLALYAVVEKAKKARSTKKKSKKADCPIAWVNVMLFDYKDQLKTGECCLHMWSSFPDEKGELLNPMGTVQCNPNTESAAALVICFPSVAAHPVYYPSFEQLLELGRNGEQPRAAPEDSEEKLQLREILERRSHTELYEHEKDLVWKMRYDIRDQYPQALAKLLVITKWNKHEDVAQMISLLQTWPELPVLNALELLDFSFPDRYVGSFAVNSLKKLTDDDVFQYLLQLVQVLKYESYLDCELTKFLLERALSNRKIGHFLFWHLRSEMHVPAVALRFGLILEAYCRGSTHHMKVLMKQGEALNKMKALNDFVKVSSQKATKPQTKEMMHMCMKQETYREALSHLQNPLNPNIILAEVCVDQCTFMDSKMKPLWIVFNNEETGGGGVGIIFKNGDDLRQDMLTLQMIQLMDILWKQEGLDLRMTPYGCLSTGDKTGLIEVVMHSDTIANIQLNKSNMVATAAFNKDALLNWLKSKNPGDALDQAIEEFTLSCAGYCVATYVLGIGDRHSDNIMVRETGQLFHIDFGHFLGNFKTKFGINRERVPFILTYDFVHVIQQGKTNNNEKFERFRGYCERAYMILRRHGLLFLHLFALMKAAGLPELSCSKDIQYLKDSLALGKTDEEALKHFRVKFNEALRESWKTKVNWLAHNVSKDNRQ
SIO_010081: PIK3CD
subclass of: SO_0000673
so part of: PIK3CD
location: join(830011..830151,831032..831260,832284..832513,833288..833467,834054..834203,834499..834588,835376..835597,838388..838484,838789..838919,839504..839563,839728..839895,840367..840488,840640..840783,841347..841446,842061..842239,842437..842546,842789..842867,843106..843273,843591..843714,843877..844022,844232..844364,844885..845022)
location: region:830011-845022:1
so has part: feature:830011-830151:1:exon
so has part: feature:831032-831260:1:exon
so has part: feature:832284-832513:1:exon
so has part: feature:833288-833467:1:exon
so has part: feature:834054-834203:1:exon
so has part: feature:834499-834588:1:exon
so has part: feature:835376-835597:1:exon
so has part: feature:838388-838484:1:exon
so has part: feature:838789-838919:1:exon
so has part: feature:839504-839563:1:exon
so has part: feature:839728-839895:1:exon
so has part: feature:840367-840488:1:exon
so has part: feature:840640-840783:1:exon
so has part: feature:841347-841446:1:exon
so has part: feature:842061-842239:1:exon
so has part: feature:842437-842546:1:exon
so has part: feature:842789-842867:1:exon
so has part: feature:843106-843273:1:exon
so has part: feature:843591-843714:1:exon
so has part: feature:843877-844022:1:exon
so has part: feature:844232-844364:1:exon
so has part: feature:844885-845022:1:exon

XP_030145102.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:830011-830151:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:831032-831260:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:832284-832513:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:833288-833467:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:834054-834203:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:834499-834588:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:835376-835597:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:838388-838484:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:838789-838919:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:839504-839563:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:839728-839895:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:840367-840488:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:840640-840783:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:841347-841446:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:842061-842239:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:842437-842546:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:842789-842867:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:843106-843273:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:843591-843714:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:843877-844022:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:844232-844364:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:844885-845022:1:exon

PIK3CD
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: PIK3CD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform
translation: MPPGIYCPTEFWSKGENQNIQVDFLLPTGIYLNLSVPCNASLGTIKQVLWKHAQYEPLFHMLSDPEAYVFTCINQTAEQQELEDEQRRLCDIQPFLPVLRLVAREGDRAKKVINSQISLLIGKGLHEFDSVQDPEVSDFRTKMCQFCEEKAAKRQQLSWAAWMEYNFPLQLEPVAKGLGVGSLQIPTKNIFVNIKFQSGGESFTFQISPWEFPITLMSYAIKKQATVFRHETVQKPEDYTLQVNGKCEYLYGNYPLYQFQHIRSCLQRGRTPHLTMVHSSAIIAMRDEQTNGITSPPKAAPKPPPLPKKKPNYGSLWSLEQPFYIELVQGSKVNADERMKLVVQAGLFHGTEMLCKTVSSSEVSVCSEPVWRQRLDFDISVCDLPRMARLCLALYAVVEKAKKARSTKKKSKKADCPIAWVNVMLFDYKDQLKTGECCLHMWSSFPDEKGELLNPMGTVQCNPNTESAAALVICFPSVAAHPVYYPSFEQLLELGRNGEQPRAAPEDSEEKLQLREILERRSHTELYEHEKDLVWKMRYDIRDQYPQALAKLLVITKWNKHEDVAQMISLLQTWPELPVLNALELLDFSFPDRYVGSFAVNSLKKLTDDDVFQYLLQLVQVLKYESYLDCELTKFLLERALSNRKIGHFLFWHLRSEMHVPAVALRFGLILEAYCRGSTHHMKVLMKQGEALNKMKALNDFVKVSSQKATKPQTKEMMHMCMKQETYREALSHLQNPLNPNIILAEVCVDQCTFMDSKMKPLWIVFNNEETGGGGVGIIFKNGDDLRQDMLTLQMIQLMDILWKQEGLDLRMTPYGCLSTGDKTGLIEVVMHSDTIANIQLNKSNMVATAAFNKDALLNWLKSKNPGDALDQAIEEFTLSCAGYCVATYVLGIGDRHSDNIMVRETGQLFHIDFGHFLGNFKTKFGINRERVPFILTYDFVHVIQQGKTNNNEKFERFRGYCERAYMILRRHGLLFLHLFALMKAAGLPELSCSKDIQYLKDSLALGKTDEEALKHFRVKFNEALRESWKTKVNWLAHNVSKDNRQ
SIO_010081: PIK3CD
subclass of: SO_0000673
so part of: PIK3CD
location: join(830011..830151,831032..831260,832284..832513,833288..833467,834054..834203,834499..834588,835376..835597,838388..838484,838789..838919,839504..839563,839728..839895,840367..840488,840640..840783,841347..841446,842061..842239,842437..842546,842789..842867,843106..843273,843591..843714,843877..844022,844232..844364,844885..845022)
location: region:830011-845022:1
so has part: feature:830011-830151:1:exon
so has part: feature:831032-831260:1:exon
so has part: feature:832284-832513:1:exon
so has part: feature:833288-833467:1:exon
so has part: feature:834054-834203:1:exon
so has part: feature:834499-834588:1:exon
so has part: feature:835376-835597:1:exon
so has part: feature:838388-838484:1:exon
so has part: feature:838789-838919:1:exon
so has part: feature:839504-839563:1:exon
so has part: feature:839728-839895:1:exon
so has part: feature:840367-840488:1:exon
so has part: feature:840640-840783:1:exon
so has part: feature:841347-841446:1:exon
so has part: feature:842061-842239:1:exon
so has part: feature:842437-842546:1:exon
so has part: feature:842789-842867:1:exon
so has part: feature:843106-843273:1:exon
so has part: feature:843591-843714:1:exon
so has part: feature:843877-844022:1:exon
so has part: feature:844232-844364:1:exon
so has part: feature:844885-845022:1:exon

XP_032607992.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:830011-830151:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:831032-831260:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:832284-832513:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:833288-833467:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:834054-834203:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:834499-834588:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:835376-835597:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:838388-838484:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:838789-838919:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:839504-839563:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:839728-839895:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:840367-840488:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:840640-840783:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:841347-841446:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:842061-842239:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:842437-842546:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:842789-842867:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:843106-843273:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:843591-843714:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:843877-844022:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:844232-844364:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:844885-845022:1:exon

CLSTN1
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: CLSTN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(847123..877145)
location: region:847123-877145:-1
so has part: feature:847123-877145:-1:exon
subclass of: SO_0000010

100227085
type: Gene
SIO_000068: ncbigene

position:847123:-1
position: 847123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:877145:-1
position: 877145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:847123-877145:-1:exon

CLSTN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: CLSTN1
product: calsyntenin 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 37 ESTs, 19 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 97 samples with support for all annotated introns
transcript id: XM_030289249.3
SIO_010081: CLSTN1
subclass of: SO_0000673
so part of: CLSTN1
location: complement(join(847123..849479,850126..850310,850572..850707,851228..851373,851960..852130,852450..852676,853146..853294,853922..854079,856903..857065,857799..857920,858776..859024,860118..860303,860403..860552,860786..860994,862482..862677,864042..864071,867843..867965,876910..877145))
location: region:847123-877145:-1
so has part: feature:876910-877145:-1:exon
so has part: feature:867843-867965:-1:exon
so has part: feature:864042-864071:-1:exon
so has part: feature:862482-862677:-1:exon
so has part: feature:860786-860994:-1:exon
so has part: feature:860403-860552:-1:exon
so has part: feature:860118-860303:-1:exon
so has part: feature:858776-859024:-1:exon
so has part: feature:857799-857920:-1:exon
so has part: feature:856903-857065:-1:exon
so has part: feature:853922-854079:-1:exon
so has part: feature:853146-853294:-1:exon
so has part: feature:852450-852676:-1:exon
so has part: feature:851960-852130:-1:exon
so has part: feature:851228-851373:-1:exon
so has part: feature:850572-850707:-1:exon
so has part: feature:850126-850310:-1:exon
so has part: feature:847123-849479:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:876910-877145:-1:exon

position:876910:-1
position: 876910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:867843-867965:-1:exon

position:867843:-1
position: 867843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:867965:-1
position: 867965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:864042-864071:-1:exon

position:864042:-1
position: 864042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:864071:-1
position: 864071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:862482-862677:-1:exon

position:862482:-1
position: 862482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:862677:-1
position: 862677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:860786-860994:-1:exon

position:860786:-1
position: 860786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:860994:-1
position: 860994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:860403-860552:-1:exon

position:860403:-1
position: 860403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:860552:-1
position: 860552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:860118-860303:-1:exon

position:860118:-1
position: 860118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:860303:-1
position: 860303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:858776-859024:-1:exon

position:858776:-1
position: 858776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:859024:-1
position: 859024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:857799-857920:-1:exon

position:857799:-1
position: 857799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:857920:-1
position: 857920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:856903-857065:-1:exon

position:856903:-1
position: 856903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:857065:-1
position: 857065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:853922-854079:-1:exon

position:853922:-1
position: 853922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:854079:-1
position: 854079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:853146-853294:-1:exon

position:853146:-1
position: 853146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:853294:-1
position: 853294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:852450-852676:-1:exon

position:852450:-1
position: 852450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:852676:-1
position: 852676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:851960-852130:-1:exon

position:851960:-1
position: 851960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:852130:-1
position: 852130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:851228-851373:-1:exon

position:851228:-1
position: 851228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:851373:-1
position: 851373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:850572-850707:-1:exon

position:850572:-1
position: 850572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:850707:-1
position: 850707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:850126-850310:-1:exon

position:850126:-1
position: 850126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:850310:-1
position: 850310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:847123-849479:-1:exon

position:849479:-1
position: 849479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CLSTN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: CLSTN1
product: calsyntenin 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 39 ESTs, 18 long SRA reads, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 98 samples with support for all annotated introns
transcript id: XM_030289250.3
SIO_010081: CLSTN1
subclass of: SO_0000673
so part of: CLSTN1
location: complement(join(847123..849479,850126..850310,850572..850707,851228..851373,851960..852130,852450..852676,853146..853294,853922..854079,856903..857065,857799..857920,858776..859024,860118..860303,860403..860552,860786..860994,862482..862677,867843..867965,876910..877144))
location: region:847123-877144:-1
so has part: feature:876910-877144:-1:exon
so has part: feature:867843-867965:-1:exon
so has part: feature:862482-862677:-1:exon
so has part: feature:860786-860994:-1:exon
so has part: feature:860403-860552:-1:exon
so has part: feature:860118-860303:-1:exon
so has part: feature:858776-859024:-1:exon
so has part: feature:857799-857920:-1:exon
so has part: feature:856903-857065:-1:exon
so has part: feature:853922-854079:-1:exon
so has part: feature:853146-853294:-1:exon
so has part: feature:852450-852676:-1:exon
so has part: feature:851960-852130:-1:exon
so has part: feature:851228-851373:-1:exon
so has part: feature:850572-850707:-1:exon
so has part: feature:850126-850310:-1:exon
so has part: feature:847123-849479:-1:exon

position:877144:-1
position: 877144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:876910-877144:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:867843-867965:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:862482-862677:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:860786-860994:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:860403-860552:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:860118-860303:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:858776-859024:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:857799-857920:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:856903-857065:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:853922-854079:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:853146-853294:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:852450-852676:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:851960-852130:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:851228-851373:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:850572-850707:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:850126-850310:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:847123-849479:-1:exon

CLSTN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: CLSTN1
product: calsyntenin 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 40 ESTs, 44 long SRA reads, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 96 samples with support for all annotated introns
transcript id: XM_030289248.3
SIO_010081: CLSTN1
subclass of: SO_0000673
so part of: CLSTN1
location: complement(join(847123..849479,850126..850310,850572..850707,851228..851373,851960..852130,852450..852676,853146..853294,853922..854079,855746..855796,856903..857065,857799..857920,858776..859024,860118..860303,860403..860552,860786..860994,862482..862677,867843..867965,876910..877144))
location: region:847123-877144:-1
so has part: feature:876910-877144:-1:exon
so has part: feature:867843-867965:-1:exon
so has part: feature:862482-862677:-1:exon
so has part: feature:860786-860994:-1:exon
so has part: feature:860403-860552:-1:exon
so has part: feature:860118-860303:-1:exon
so has part: feature:858776-859024:-1:exon
so has part: feature:857799-857920:-1:exon
so has part: feature:856903-857065:-1:exon
so has part: feature:855746-855796:-1:exon
so has part: feature:853922-854079:-1:exon
so has part: feature:853146-853294:-1:exon
so has part: feature:852450-852676:-1:exon
so has part: feature:851960-852130:-1:exon
so has part: feature:851228-851373:-1:exon
so has part: feature:850572-850707:-1:exon
so has part: feature:850126-850310:-1:exon
so has part: feature:847123-849479:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:876910-877144:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:867843-867965:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:862482-862677:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:860786-860994:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:860403-860552:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:860118-860303:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:858776-859024:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:857799-857920:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:856903-857065:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:855746-855796:-1:exon

position:855746:-1
position: 855746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:855796:-1
position: 855796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:853922-854079:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:853146-853294:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:852450-852676:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:851960-852130:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:851228-851373:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:850572-850707:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:850126-850310:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:847123-849479:-1:exon

CLSTN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: CLSTN1
product: calsyntenin 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 38 ESTs, 32 long SRA reads, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 95 samples with support for all annotated introns
transcript id: XM_030289247.3
SIO_010081: CLSTN1
subclass of: SO_0000673
so part of: CLSTN1
location: complement(join(847123..849479,850126..850310,850572..850707,851228..851373,851960..852130,852450..852676,853146..853294,853922..854079,855746..855796,856903..857065,857799..857920,858776..859024,860118..860303,860403..860552,860786..860994,862482..862677,864042..864071,867843..867965,876910..877144))
location: region:847123-877144:-1
so has part: feature:876910-877144:-1:exon
so has part: feature:867843-867965:-1:exon
so has part: feature:864042-864071:-1:exon
so has part: feature:862482-862677:-1:exon
so has part: feature:860786-860994:-1:exon
so has part: feature:860403-860552:-1:exon
so has part: feature:860118-860303:-1:exon
so has part: feature:858776-859024:-1:exon
so has part: feature:857799-857920:-1:exon
so has part: feature:856903-857065:-1:exon
so has part: feature:855746-855796:-1:exon
so has part: feature:853922-854079:-1:exon
so has part: feature:853146-853294:-1:exon
so has part: feature:852450-852676:-1:exon
so has part: feature:851960-852130:-1:exon
so has part: feature:851228-851373:-1:exon
so has part: feature:850572-850707:-1:exon
so has part: feature:850126-850310:-1:exon
so has part: feature:847123-849479:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:876910-877144:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:867843-867965:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:864042-864071:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:862482-862677:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:860786-860994:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:860403-860552:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:860118-860303:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:858776-859024:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:857799-857920:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:856903-857065:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:855746-855796:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:853922-854079:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:853146-853294:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:852450-852676:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:851960-852130:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:851228-851373:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:850572-850707:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:850126-850310:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:847123-849479:-1:exon

CLSTN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: CLSTN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calsyntenin-1 isoform X4
translation: MPAPAARLLLAALLCGAAAAARVNKHKPWIETTYHGIVTENDNTVLLDPPLIALDKDAPLRFAGEICGFKIHGQNVPFEAVVVDKSTGEGIIRSKEKLDCELQKDYTFTIQAYDCGKGPDGANAKKSHKATVHIQVNDVNEYAPVFKEKSYKATVIEGKRYDNILKVEAVDADCSPQFSQICSYEIVTPDVPFAIDKDGYIKNTEKLNYGKEHQYKLTVTAYDCGKKRAAEDVLVKISIKPTCKPGWQGWSKRIEYEPGTGSLALFPGMHLETCDEPITSVEATVELETNHIGKGCDRDTYSEKSIHRLCGAASGTAELLPPPSSAANWTVGLPTDNGHDSDQVFEFNGTQAVKIPDGVVTVNLKEPFMISVWMRHGPGTKEKETILCNSDKTDMNRHHYTLYVHNCRLVFLLRQDPSEGKSYKPAEFHWKLNQVCDKEWHHYVVNVEFPAVSLYVDGVSYDPFPVTEDYPLHPSKIETQLVVGACWQGGELRMAQFFRGSLAGLMIRSGKLENKKVIDCLYTCKEGLDLQMADGVGKGVKLHMNPSQSTLTIEGDDIDRVDKAMQHISYLNSRQFPTPGIRRLKITSTVKCFNEEACVSIPSVEGYVMVLQPEEPKISLSGINHFARSASEFESSEGVSLFPELRIISTITREVEPEGDGDEDPTVQESLVSEEIMHNLDMCEVTVLGEELNQEQESLEIDMTRLQQKGIEMSSSNLGMIITGVDTMANYEEVLHLIRYRNWHTASLFDRKFKLLCSELNGRYVSNEFQVEVNVIHTASPVEHANHIAAQPQFIHPVHHSFVDLSGHNLANPHPFSVVPSTATVVIVVCVSFLVFMIILGVFRIRAAHQRTMRDQDSGKENEMDWDDSALTITVNPMETYEDQHSSEEEEEEEEEESEDGEEDDITSAESESSEEEEGEQEEDQQNVNRQQQLEWDDSTLSY
SIO_010081: CLSTN1
subclass of: SO_0000673
so part of: CLSTN1
location: complement(join(849285..849479,850126..850310,850572..850707,851228..851373,851960..852130,852450..852676,853146..853294,853922..854079,856903..857065,857799..857920,858776..859024,860118..860303,860403..860552,860786..860994,862482..862677,867843..867965,876910..876976))
location: region:849285-876976:-1
so has part: feature:876910-876976:-1:exon
so has part: feature:867843-867965:-1:exon
so has part: feature:862482-862677:-1:exon
so has part: feature:860786-860994:-1:exon
so has part: feature:860403-860552:-1:exon
so has part: feature:860118-860303:-1:exon
so has part: feature:858776-859024:-1:exon
so has part: feature:857799-857920:-1:exon
so has part: feature:856903-857065:-1:exon
so has part: feature:853922-854079:-1:exon
so has part: feature:853146-853294:-1:exon
so has part: feature:852450-852676:-1:exon
so has part: feature:851960-852130:-1:exon
so has part: feature:851228-851373:-1:exon
so has part: feature:850572-850707:-1:exon
so has part: feature:850126-850310:-1:exon
so has part: feature:849285-849479:-1:exon

XP_030145110.3
type: Protein
SIO_000068: ncbiprotein

position:849285:-1
position: 849285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:876976:-1
position: 876976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:876910-876976:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:867843-867965:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:862482-862677:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:860786-860994:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:860403-860552:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:860118-860303:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:858776-859024:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:857799-857920:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:856903-857065:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:853922-854079:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:853146-853294:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:852450-852676:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:851960-852130:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:851228-851373:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:850572-850707:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:850126-850310:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:849285-849479:-1:exon

CLSTN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: CLSTN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calsyntenin-1 isoform X2
translation: MPAPAARLLLAALLCGAAAAARVNKHKPWIETTYHGIVTENDNTVLLDPPLIALDKDAPLRFAGEICGFKIHGQNVPFEAVVVDKSTGEGIIRSKEKLDCELQKDYTFTIQAYDCGKGPDGANAKKSHKATVHIQVNDVNEYAPVFKEKSYKATVIEGKRYDNILKVEAVDADCSPQFSQICSYEIVTPDVPFAIDKDGYIKNTEKLNYGKEHQYKLTVTAYDCGKKRAAEDVLVKISIKPTCKPGWQGWSKRIEYEPGTGSLALFPGMHLETCDEPITSVEATVELETNHIGKGCDRDTYSEKSIHRLCGAASGTAELLPPPSSAANWTVGLPTDNGHDSDQVFEFNGTQAVKIPDGVVTVNLKEPFMISVWMRHGPGTKEKETILCNSDKTDMNRHHYTLYVHNCRLVFLLRQDPSEGKSYKPAEFHWKLNQVCDKEWHHYVVNVEFPAVSLYVDGVSYDPFPVTEDYPLHPSKIETQLVVGACWQEYTGSENDNETVPETSAGGELRMAQFFRGSLAGLMIRSGKLENKKVIDCLYTCKEGLDLQMADGVGKGVKLHMNPSQSTLTIEGDDIDRVDKAMQHISYLNSRQFPTPGIRRLKITSTVKCFNEEACVSIPSVEGYVMVLQPEEPKISLSGINHFARSASEFESSEGVSLFPELRIISTITREVEPEGDGDEDPTVQESLVSEEIMHNLDMCEVTVLGEELNQEQESLEIDMTRLQQKGIEMSSSNLGMIITGVDTMANYEEVLHLIRYRNWHTASLFDRKFKLLCSELNGRYVSNEFQVEVNVIHTASPVEHANHIAAQPQFIHPVHHSFVDLSGHNLANPHPFSVVPSTATVVIVVCVSFLVFMIILGVFRIRAAHQRTMRDQDSGKENEMDWDDSALTITVNPMETYEDQHSSEEEEEEEEEESEDGEEDDITSAESESSEEEEGEQEEDQQNVNRQQQLEWDDSTLSY
SIO_010081: CLSTN1
subclass of: SO_0000673
so part of: CLSTN1
location: complement(join(849285..849479,850126..850310,850572..850707,851228..851373,851960..852130,852450..852676,853146..853294,853922..854079,855746..855796,856903..857065,857799..857920,858776..859024,860118..860303,860403..860552,860786..860994,862482..862677,867843..867965,876910..876976))
location: region:849285-876976:-1
so has part: feature:876910-876976:-1:exon
so has part: feature:867843-867965:-1:exon
so has part: feature:862482-862677:-1:exon
so has part: feature:860786-860994:-1:exon
so has part: feature:860403-860552:-1:exon
so has part: feature:860118-860303:-1:exon
so has part: feature:858776-859024:-1:exon
so has part: feature:857799-857920:-1:exon
so has part: feature:856903-857065:-1:exon
so has part: feature:855746-855796:-1:exon
so has part: feature:853922-854079:-1:exon
so has part: feature:853146-853294:-1:exon
so has part: feature:852450-852676:-1:exon
so has part: feature:851960-852130:-1:exon
so has part: feature:851228-851373:-1:exon
so has part: feature:850572-850707:-1:exon
so has part: feature:850126-850310:-1:exon
so has part: feature:849285-849479:-1:exon

XP_030145108.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:876910-876976:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:867843-867965:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:862482-862677:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:860786-860994:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:860403-860552:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:860118-860303:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:858776-859024:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:857799-857920:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:856903-857065:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:855746-855796:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:853922-854079:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:853146-853294:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:852450-852676:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:851960-852130:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:851228-851373:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:850572-850707:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:850126-850310:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:849285-849479:-1:exon

CLSTN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: CLSTN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calsyntenin-1 isoform X3
translation: MPAPAARLLLAALLCGAAAAARVNKHKPWIETTYHGIVTENDNTVLLDPPLIALDKDAPLRFAESFEVTVTKEGEICGFKIHGQNVPFEAVVVDKSTGEGIIRSKEKLDCELQKDYTFTIQAYDCGKGPDGANAKKSHKATVHIQVNDVNEYAPVFKEKSYKATVIEGKRYDNILKVEAVDADCSPQFSQICSYEIVTPDVPFAIDKDGYIKNTEKLNYGKEHQYKLTVTAYDCGKKRAAEDVLVKISIKPTCKPGWQGWSKRIEYEPGTGSLALFPGMHLETCDEPITSVEATVELETNHIGKGCDRDTYSEKSIHRLCGAASGTAELLPPPSSAANWTVGLPTDNGHDSDQVFEFNGTQAVKIPDGVVTVNLKEPFMISVWMRHGPGTKEKETILCNSDKTDMNRHHYTLYVHNCRLVFLLRQDPSEGKSYKPAEFHWKLNQVCDKEWHHYVVNVEFPAVSLYVDGVSYDPFPVTEDYPLHPSKIETQLVVGACWQGGELRMAQFFRGSLAGLMIRSGKLENKKVIDCLYTCKEGLDLQMADGVGKGVKLHMNPSQSTLTIEGDDIDRVDKAMQHISYLNSRQFPTPGIRRLKITSTVKCFNEEACVSIPSVEGYVMVLQPEEPKISLSGINHFARSASEFESSEGVSLFPELRIISTITREVEPEGDGDEDPTVQESLVSEEIMHNLDMCEVTVLGEELNQEQESLEIDMTRLQQKGIEMSSSNLGMIITGVDTMANYEEVLHLIRYRNWHTASLFDRKFKLLCSELNGRYVSNEFQVEVNVIHTASPVEHANHIAAQPQFIHPVHHSFVDLSGHNLANPHPFSVVPSTATVVIVVCVSFLVFMIILGVFRIRAAHQRTMRDQDSGKENEMDWDDSALTITVNPMETYEDQHSSEEEEEEEEEESEDGEEDDITSAESESSEEEEGEQEEDQQNVNRQQQLEWDDSTLSY
SIO_010081: CLSTN1
subclass of: SO_0000673
so part of: CLSTN1
location: complement(join(849285..849479,850126..850310,850572..850707,851228..851373,851960..852130,852450..852676,853146..853294,853922..854079,856903..857065,857799..857920,858776..859024,860118..860303,860403..860552,860786..860994,862482..862677,864042..864071,867843..867965,876910..876976))
location: region:849285-876976:-1
so has part: feature:876910-876976:-1:exon
so has part: feature:867843-867965:-1:exon
so has part: feature:864042-864071:-1:exon
so has part: feature:862482-862677:-1:exon
so has part: feature:860786-860994:-1:exon
so has part: feature:860403-860552:-1:exon
so has part: feature:860118-860303:-1:exon
so has part: feature:858776-859024:-1:exon
so has part: feature:857799-857920:-1:exon
so has part: feature:856903-857065:-1:exon
so has part: feature:853922-854079:-1:exon
so has part: feature:853146-853294:-1:exon
so has part: feature:852450-852676:-1:exon
so has part: feature:851960-852130:-1:exon
so has part: feature:851228-851373:-1:exon
so has part: feature:850572-850707:-1:exon
so has part: feature:850126-850310:-1:exon
so has part: feature:849285-849479:-1:exon

XP_030145109.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:876910-876976:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:867843-867965:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:864042-864071:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:862482-862677:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:860786-860994:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:860403-860552:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:860118-860303:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:858776-859024:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:857799-857920:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:856903-857065:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:853922-854079:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:853146-853294:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:852450-852676:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:851960-852130:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:851228-851373:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:850572-850707:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:850126-850310:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:849285-849479:-1:exon

CLSTN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: CLSTN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calsyntenin-1 isoform X1
translation: MPAPAARLLLAALLCGAAAAARVNKHKPWIETTYHGIVTENDNTVLLDPPLIALDKDAPLRFAESFEVTVTKEGEICGFKIHGQNVPFEAVVVDKSTGEGIIRSKEKLDCELQKDYTFTIQAYDCGKGPDGANAKKSHKATVHIQVNDVNEYAPVFKEKSYKATVIEGKRYDNILKVEAVDADCSPQFSQICSYEIVTPDVPFAIDKDGYIKNTEKLNYGKEHQYKLTVTAYDCGKKRAAEDVLVKISIKPTCKPGWQGWSKRIEYEPGTGSLALFPGMHLETCDEPITSVEATVELETNHIGKGCDRDTYSEKSIHRLCGAASGTAELLPPPSSAANWTVGLPTDNGHDSDQVFEFNGTQAVKIPDGVVTVNLKEPFMISVWMRHGPGTKEKETILCNSDKTDMNRHHYTLYVHNCRLVFLLRQDPSEGKSYKPAEFHWKLNQVCDKEWHHYVVNVEFPAVSLYVDGVSYDPFPVTEDYPLHPSKIETQLVVGACWQEYTGSENDNETVPETSAGGELRMAQFFRGSLAGLMIRSGKLENKKVIDCLYTCKEGLDLQMADGVGKGVKLHMNPSQSTLTIEGDDIDRVDKAMQHISYLNSRQFPTPGIRRLKITSTVKCFNEEACVSIPSVEGYVMVLQPEEPKISLSGINHFARSASEFESSEGVSLFPELRIISTITREVEPEGDGDEDPTVQESLVSEEIMHNLDMCEVTVLGEELNQEQESLEIDMTRLQQKGIEMSSSNLGMIITGVDTMANYEEVLHLIRYRNWHTASLFDRKFKLLCSELNGRYVSNEFQVEVNVIHTASPVEHANHIAAQPQFIHPVHHSFVDLSGHNLANPHPFSVVPSTATVVIVVCVSFLVFMIILGVFRIRAAHQRTMRDQDSGKENEMDWDDSALTITVNPMETYEDQHSSEEEEEEEEEESEDGEEDDITSAESESSEEEEGEQEEDQQNVNRQQQLEWDDSTLSY
SIO_010081: CLSTN1
subclass of: SO_0000673
so part of: CLSTN1
location: complement(join(849285..849479,850126..850310,850572..850707,851228..851373,851960..852130,852450..852676,853146..853294,853922..854079,855746..855796,856903..857065,857799..857920,858776..859024,860118..860303,860403..860552,860786..860994,862482..862677,864042..864071,867843..867965,876910..876976))
location: region:849285-876976:-1
so has part: feature:876910-876976:-1:exon
so has part: feature:867843-867965:-1:exon
so has part: feature:864042-864071:-1:exon
so has part: feature:862482-862677:-1:exon
so has part: feature:860786-860994:-1:exon
so has part: feature:860403-860552:-1:exon
so has part: feature:860118-860303:-1:exon
so has part: feature:858776-859024:-1:exon
so has part: feature:857799-857920:-1:exon
so has part: feature:856903-857065:-1:exon
so has part: feature:855746-855796:-1:exon
so has part: feature:853922-854079:-1:exon
so has part: feature:853146-853294:-1:exon
so has part: feature:852450-852676:-1:exon
so has part: feature:851960-852130:-1:exon
so has part: feature:851228-851373:-1:exon
so has part: feature:850572-850707:-1:exon
so has part: feature:850126-850310:-1:exon
so has part: feature:849285-849479:-1:exon

XP_030145107.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:876910-876976:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:867843-867965:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:864042-864071:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:862482-862677:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:860786-860994:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:860403-860552:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:860118-860303:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:858776-859024:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:857799-857920:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:856903-857065:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:855746-855796:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:853922-854079:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:853146-853294:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:852450-852676:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:851960-852130:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:851228-851373:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:850572-850707:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:850126-850310:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:849285-849479:-1:exon

CTNNBIP1
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: CTNNBIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(889360..910470)
location: region:889360-910470:-1
so has part: feature:889360-910470:-1:exon
subclass of: SO_0000010

100225165
type: Gene
SIO_000068: ncbigene

position:889360:-1
position: 889360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:910470:-1
position: 910470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:889360-910470:-1:exon

CTNNBIP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: CTNNBIP1
product: catenin beta interacting protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 20 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 119 samples with support for all annotated introns
transcript id: XM_030289445.3
SIO_010081: CTNNBIP1
subclass of: SO_0000673
so part of: CTNNBIP1
location: complement(join(889360..891344,896929..897019,897470..897590,899874..899963,910245..910470))
location: region:889360-910470:-1
so has part: feature:910245-910470:-1:exon
so has part: feature:899874-899963:-1:exon
so has part: feature:897470-897590:-1:exon
so has part: feature:896929-897019:-1:exon
so has part: feature:889360-891344:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:910245-910470:-1:exon

position:910245:-1
position: 910245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:899874-899963:-1:exon

position:899874:-1
position: 899874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:899963:-1
position: 899963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:897470-897590:-1:exon

position:897470:-1
position: 897470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:897590:-1
position: 897590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:896929-897019:-1:exon

position:896929:-1
position: 896929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:897019:-1
position: 897019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:889360-891344:-1:exon

position:891344:-1
position: 891344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CTNNBIP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: CTNNBIP1
product: catenin beta interacting protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 20 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 125 samples with support for all annotated introns
transcript id: XM_004175195.5
SIO_010081: CTNNBIP1
subclass of: SO_0000673
so part of: CTNNBIP1
location: complement(join(889360..891344,896929..897019,897470..897590,899874..899963,904670..904862))
location: region:889360-904862:-1
so has part: feature:904670-904862:-1:exon
so has part: feature:899874-899963:-1:exon
so has part: feature:897470-897590:-1:exon
so has part: feature:896929-897019:-1:exon
so has part: feature:889360-891344:-1:exon

position:904862:-1
position: 904862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:904670-904862:-1:exon

position:904670:-1
position: 904670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:899874-899963:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:897470-897590:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:896929-897019:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:889360-891344:-1:exon

CTNNBIP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: CTNNBIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-catenin-interacting protein 1
translation: MNREGVPGKSPEEMYIQQKVRVLLMLRKMGSNLTASEEEFLRTYAGVVNSQLSQLPQHSIDQGAEDVVMAFSRSETEDRRQ
SIO_010081: CTNNBIP1
subclass of: SO_0000673
so part of: CTNNBIP1
location: complement(join(891286..891344,896929..897019,897470..897565))
location: region:891286-897565:-1
so has part: feature:897470-897565:-1:exon
so has part: feature:896929-897019:-1:exon
so has part: feature:891286-891344:-1:exon

XP_030145305.1
type: Protein
SIO_000068: ncbiprotein

position:891286:-1
position: 891286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:897565:-1
position: 897565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:897470-897565:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:896929-897019:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:891286-891344:-1:exon

CTNNBIP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: CTNNBIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-catenin-interacting protein 1
translation: MNREGVPGKSPEEMYIQQKVRVLLMLRKMGSNLTASEEEFLRTYAGVVNSQLSQLPQHSIDQGAEDVVMAFSRSETEDRRQ
SIO_010081: CTNNBIP1
subclass of: SO_0000673
so part of: CTNNBIP1
location: complement(join(891286..891344,896929..897019,897470..897565))
location: region:891286-897565:-1
so has part: feature:897470-897565:-1:exon
so has part: feature:896929-897019:-1:exon
so has part: feature:891286-891344:-1:exon

XP_004175243.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:897470-897565:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:896929-897019:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:891286-891344:-1:exon

LZIC
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LZIC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(913277..921480)
location: region:913277-921480:-1
so has part: feature:913277-921480:-1:exon
subclass of: SO_0000010

100228052
type: Gene
SIO_000068: ncbigene

position:913277:-1
position: 913277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:921480:-1
position: 921480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:913277-921480:-1:exon

LZIC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LZIC
product: leucine zipper and CTNNBIP1 domain containing, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 ESTs, 1 long SRA read, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_032752157.2
SIO_010081: LZIC
subclass of: SO_0000673
so part of: LZIC
location: complement(join(913277..915588,916507..916588,918292..918387,918524..918622,919149..919284,920297..920438,921463..921480))
location: region:913277-921480:-1
so has part: feature:921463-921480:-1:exon
so has part: feature:920297-920438:-1:exon
so has part: feature:919149-919284:-1:exon
so has part: feature:918524-918622:-1:exon
so has part: feature:918292-918387:-1:exon
so has part: feature:916507-916588:-1:exon
so has part: feature:913277-915588:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:921463-921480:-1:exon

position:921463:-1
position: 921463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:920297-920438:-1:exon

position:920297:-1
position: 920297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:920438:-1
position: 920438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:919149-919284:-1:exon

position:919149:-1
position: 919149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:919284:-1
position: 919284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:918524-918622:-1:exon

position:918524:-1
position: 918524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:918622:-1
position: 918622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:918292-918387:-1:exon

position:918292:-1
position: 918292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:918387:-1
position: 918387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:916507-916588:-1:exon

position:916507:-1
position: 916507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:916588:-1
position: 916588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:913277-915588:-1:exon

position:915588:-1
position: 915588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LZIC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LZIC
product: leucine zipper and CTNNBIP1 domain containing, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 ESTs, 1 long SRA read, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 55 samples with support for all annotated introns
transcript id: XM_030289443.3
SIO_010081: LZIC
subclass of: SO_0000673
so part of: LZIC
location: complement(join(913277..915588,916507..916588,918292..918387,918524..918622,919149..919284,920297..920438,921252..921276))
location: region:913277-921276:-1
so has part: feature:921252-921276:-1:exon
so has part: feature:920297-920438:-1:exon
so has part: feature:919149-919284:-1:exon
so has part: feature:918524-918622:-1:exon
so has part: feature:918292-918387:-1:exon
so has part: feature:916507-916588:-1:exon
so has part: feature:913277-915588:-1:exon

position:921276:-1
position: 921276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:921252-921276:-1:exon

position:921252:-1
position: 921252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:920297-920438:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:919149-919284:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:918524-918622:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:918292-918387:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:916507-916588:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:913277-915588:-1:exon

LZIC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LZIC
product: leucine zipper and CTNNBIP1 domain containing, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 ESTs, 5 long SRA reads, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 95 samples with support for all annotated introns
transcript id: XM_002187617.6
SIO_010081: LZIC
subclass of: SO_0000673
so part of: LZIC
location: complement(join(913277..915588,916507..916588,918292..918387,918524..918622,919149..919284,920297..920438,921024..921111))
location: region:913277-921111:-1
so has part: feature:921024-921111:-1:exon
so has part: feature:920297-920438:-1:exon
so has part: feature:919149-919284:-1:exon
so has part: feature:918524-918622:-1:exon
so has part: feature:918292-918387:-1:exon
so has part: feature:916507-916588:-1:exon
so has part: feature:913277-915588:-1:exon

position:921111:-1
position: 921111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:921024-921111:-1:exon

position:921024:-1
position: 921024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:920297-920438:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:919149-919284:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:918524-918622:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:918292-918387:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:916507-916588:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:913277-915588:-1:exon

LZIC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LZIC
product: leucine zipper and CTNNBIP1 domain containing, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 ESTs, 1 long SRA read, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 129 samples with support for all annotated introns
transcript id: XM_012570440.4
SIO_010081: LZIC
subclass of: SO_0000673
so part of: LZIC
location: complement(join(913277..915588,916507..916588,918292..918387,918524..918622,919149..919284,920297..920438,920564..921076))
location: region:913277-921076:-1
so has part: feature:920564-921076:-1:exon
so has part: feature:920297-920438:-1:exon
so has part: feature:919149-919284:-1:exon
so has part: feature:918524-918622:-1:exon
so has part: feature:918292-918387:-1:exon
so has part: feature:916507-916588:-1:exon
so has part: feature:913277-915588:-1:exon

position:921076:-1
position: 921076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:920564-921076:-1:exon

position:920564:-1
position: 920564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:920297-920438:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:919149-919284:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:918524-918622:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:918292-918387:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:916507-916588:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:913277-915588:-1:exon

LZIC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LZIC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein LZIC
translation: MASRGTTETSKLKQNLEEQLDRLMQQLQDLEECREELDADEYEETKKETLEQLSEFNDSLKKIMSGDMTLVDELSGMQLAIQAAISQAFKTPEVIRMFAKKQPRQLRTRLAEMDRDLMVGKLPRDLYTQQKLEILTALRKLGEKLTGDDEMFLSTNAGTALSQFERVSTDLGSGDKVFALASVEVEKTKQ
SIO_010081: LZIC
subclass of: SO_0000673
so part of: LZIC
location: complement(join(915530..915588,916507..916588,918292..918387,918524..918622,919149..919284,920297..920397))
location: region:915530-920397:-1
so has part: feature:920297-920397:-1:exon
so has part: feature:919149-919284:-1:exon
so has part: feature:918524-918622:-1:exon
so has part: feature:918292-918387:-1:exon
so has part: feature:916507-916588:-1:exon
so has part: feature:915530-915588:-1:exon

XP_030145303.1
type: Protein
SIO_000068: ncbiprotein

position:915530:-1
position: 915530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:920397:-1
position: 920397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:920297-920397:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:919149-919284:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:918524-918622:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:918292-918387:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:916507-916588:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:915530-915588:-1:exon

LZIC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LZIC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein LZIC
translation: MASRGTTETSKLKQNLEEQLDRLMQQLQDLEECREELDADEYEETKKETLEQLSEFNDSLKKIMSGDMTLVDELSGMQLAIQAAISQAFKTPEVIRMFAKKQPRQLRTRLAEMDRDLMVGKLPRDLYTQQKLEILTALRKLGEKLTGDDEMFLSTNAGTALSQFERVSTDLGSGDKVFALASVEVEKTKQ
SIO_010081: LZIC
subclass of: SO_0000673
so part of: LZIC
location: complement(join(915530..915588,916507..916588,918292..918387,918524..918622,919149..919284,920297..920397))
location: region:915530-920397:-1
so has part: feature:920297-920397:-1:exon
so has part: feature:919149-919284:-1:exon
so has part: feature:918524-918622:-1:exon
so has part: feature:918292-918387:-1:exon
so has part: feature:916507-916588:-1:exon
so has part: feature:915530-915588:-1:exon

XP_032608048.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:920297-920397:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:919149-919284:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:918524-918622:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:918292-918387:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:916507-916588:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:915530-915588:-1:exon

LZIC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LZIC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein LZIC
translation: MASRGTTETSKLKQNLEEQLDRLMQQLQDLEECREELDADEYEETKKETLEQLSEFNDSLKKIMSGDMTLVDELSGMQLAIQAAISQAFKTPEVIRMFAKKQPRQLRTRLAEMDRDLMVGKLPRDLYTQQKLEILTALRKLGEKLTGDDEMFLSTNAGTALSQFERVSTDLGSGDKVFALASVEVEKTKQ
SIO_010081: LZIC
subclass of: SO_0000673
so part of: LZIC
location: complement(join(915530..915588,916507..916588,918292..918387,918524..918622,919149..919284,920297..920397))
location: region:915530-920397:-1
so has part: feature:920297-920397:-1:exon
so has part: feature:919149-919284:-1:exon
so has part: feature:918524-918622:-1:exon
so has part: feature:918292-918387:-1:exon
so has part: feature:916507-916588:-1:exon
so has part: feature:915530-915588:-1:exon

XP_002187653.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:920297-920397:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:919149-919284:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:918524-918622:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:918292-918387:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:916507-916588:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:915530-915588:-1:exon

LZIC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LZIC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein LZIC
translation: MASRGTTETSKLKQNLEEQLDRLMQQLQDLEECREELDADEYEETKKETLEQLSEFNDSLKKIMSGDMTLVDELSGMQLAIQAAISQAFKTPEVIRMFAKKQPRQLRTRLAEMDRDLMVGKLPRDLYTQQKLEILTALRKLGEKLTGDDEMFLSTNAGTALSQFERVSTDLGSGDKVFALASVEVEKTKQ
SIO_010081: LZIC
subclass of: SO_0000673
so part of: LZIC
location: complement(join(915530..915588,916507..916588,918292..918387,918524..918622,919149..919284,920297..920397))
location: region:915530-920397:-1
so has part: feature:920297-920397:-1:exon
so has part: feature:919149-919284:-1:exon
so has part: feature:918524-918622:-1:exon
so has part: feature:918292-918387:-1:exon
so has part: feature:916507-916588:-1:exon
so has part: feature:915530-915588:-1:exon

XP_012425894.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:920297-920397:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:919149-919284:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:918524-918622:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:918292-918387:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:916507-916588:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:915530-915588:-1:exon

NMNAT1
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: NMNAT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 921081..926184
location: region:921081-926184:1
so has part: feature:921081-926184:1:exon
subclass of: SO_0000010

100228007
type: Gene
SIO_000068: ncbigene

position:921081:1
position: 921081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:926184:1
position: 926184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:921081-926184:1:exon

NMNAT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: NMNAT1
product: nicotinamide nucleotide adenylyltransferase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 1 long SRA read, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 43 samples with support for all annotated introns
transcript id: XM_030289442.3
SIO_010081: NMNAT1
subclass of: SO_0000673
so part of: NMNAT1
location: join(921081..921152,922825..922999,923397..923580,923748..923893,923982..926184)
location: region:921081-926184:1
so has part: feature:921081-921152:1:exon
so has part: feature:922825-922999:1:exon
so has part: feature:923397-923580:1:exon
so has part: feature:923748-923893:1:exon
so has part: feature:923982-926184:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:921081-921152:1:exon

position:921152:1
position: 921152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:922825-922999:1:exon

position:922825:1
position: 922825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:922999:1
position: 922999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:923397-923580:1:exon

position:923397:1
position: 923397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:923580:1
position: 923580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:923748-923893:1:exon

position:923748:1
position: 923748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:923893:1
position: 923893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:923982-926184:1:exon

position:923982:1
position: 923982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NMNAT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: NMNAT1
product: nicotinamide nucleotide adenylyltransferase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041720431.1
SIO_010081: NMNAT1
subclass of: SO_0000673
so part of: NMNAT1
location: join(921465..921553,922826..922999,923397..923580,923748..923893,923982..926184)
location: region:921465-926184:1
so has part: feature:921465-921553:1:exon
so has part: feature:922826-922999:1:exon
so has part: feature:923397-923580:1:exon
so has part: feature:923748-923893:1:exon
so has part: feature:923982-926184:1:exon

position:921465:1
position: 921465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:921465-921553:1:exon

position:921553:1
position: 921553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:922826-922999:1:exon

position:922826:1
position: 922826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:923397-923580:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:923748-923893:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:923982-926184:1:exon

NMNAT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: NMNAT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nicotinamide/nicotinic acid mononucleotide adenylyltransferase 1
translation: MAMEDPDRKTEVVLLACGSFNPITNMHLRLFELAKDYLHETGKYKVIKGIISPVGDAYKKKGLISANHRVTMAKLATKNSDWVEVDDWESCQSEWLETLKVLRYHHQKLLSADVTNSLQHTVPITKLGRKRKQEQNSHEPVKKKNQSPVVKSVPQVKLLCGSDMLESFGVPNLWKLEDITEIVEKHGLVCISRAGNNVQKFIYESDILWRHKNNIHLVEEWITNDISSTKIRRALRRGQSIRYLVPDVVRAYIEKNRLYSPESEDRNAGVVLAPFQKHASDPKSSQALSN
SIO_010081: NMNAT1
subclass of: SO_0000673
so part of: NMNAT1
location: join(922876..922999,923397..923580,923748..923893,923982..924400)
location: region:922876-924400:1
so has part: feature:922876-922999:1:exon
so has part: feature:923397-923580:1:exon
so has part: feature:923748-923893:1:exon
so has part: feature:923982-924400:1:exon

XP_030145302.3
type: Protein
SIO_000068: ncbiprotein

position:922876:1
position: 922876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:924400:1
position: 924400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:922876-922999:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:923397-923580:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:923748-923893:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:923982-924400:1:exon

NMNAT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: NMNAT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nicotinamide/nicotinic acid mononucleotide adenylyltransferase 1
translation: MAMEDPDRKTEVVLLACGSFNPITNMHLRLFELAKDYLHETGKYKVIKGIISPVGDAYKKKGLISANHRVTMAKLATKNSDWVEVDDWESCQSEWLETLKVLRYHHQKLLSADVTNSLQHTVPITKLGRKRKQEQNSHEPVKKKNQSPVVKSVPQVKLLCGSDMLESFGVPNLWKLEDITEIVEKHGLVCISRAGNNVQKFIYESDILWRHKNNIHLVEEWITNDISSTKIRRALRRGQSIRYLVPDVVRAYIEKNRLYSPESEDRNAGVVLAPFQKHASDPKSSQALSN
SIO_010081: NMNAT1
subclass of: SO_0000673
so part of: NMNAT1
location: join(922876..922999,923397..923580,923748..923893,923982..924400)
location: region:922876-924400:1
so has part: feature:922876-922999:1:exon
so has part: feature:923397-923580:1:exon
so has part: feature:923748-923893:1:exon
so has part: feature:923982-924400:1:exon

XP_041576365.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:922876-922999:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:923397-923580:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:923748-923893:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:923982-924400:1:exon

RBP7
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: RBP7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 926325..928504
location: region:926325-928504:1
so has part: feature:926325-928504:1:exon
subclass of: SO_0000010

115498042
type: Gene
SIO_000068: ncbigene

position:926325:1
position: 926325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:928504:1
position: 928504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:926325-928504:1:exon

RBP7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: RBP7
product: retinol binding protein 7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 1 EST, 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_030289444.3
SIO_010081: RBP7
subclass of: SO_0000673
so part of: RBP7
location: join(926325..926884,927398..927576,927832..927933,928254..928504)
location: region:926325-928504:1
so has part: feature:926325-926884:1:exon
so has part: feature:927398-927576:1:exon
so has part: feature:927832-927933:1:exon
so has part: feature:928254-928504:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:926325-926884:1:exon

position:926884:1
position: 926884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:927398-927576:1:exon

position:927398:1
position: 927398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:927576:1
position: 927576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:927832-927933:1:exon

position:927832:1
position: 927832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:927933:1
position: 927933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:928254-928504:1:exon

position:928254:1
position: 928254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RBP7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: RBP7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: retinoid-binding protein 7
translation: MPVDFSGTWNLVSNDNFEGYMVALGIDFATRKVAKMLKPQKVIKQDGDSFYIHTTSTFRDYLLEFKVGEEFDEETKGLDNRKCKSLVTWENDKLVCVQTGEKKNRGWTHWLEGDDLHLELRCENQVCRQVFKRA
SIO_010081: RBP7
subclass of: SO_0000673
so part of: RBP7
location: join(926812..926884,927398..927576,927832..927933,928254..928304)
location: region:926812-928304:1
so has part: feature:926812-926884:1:exon
so has part: feature:927398-927576:1:exon
so has part: feature:927832-927933:1:exon
so has part: feature:928254-928304:1:exon

XP_030145304.3
type: Protein
SIO_000068: ncbiprotein

position:926812:1
position: 926812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:928304:1
position: 928304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:926812-926884:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:927398-927576:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:927832-927933:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:928254-928304:1:exon

UBE4B
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: UBE4B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 931159..962472
location: region:931159-962472:1
so has part: feature:931159-962472:1:exon
subclass of: SO_0000010

100230889
type: Gene
SIO_000068: ncbigene

position:931159:1
position: 931159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:962472:1
position: 962472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:931159-962472:1:exon

UBE4B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: UBE4B
product: ubiquitination factor E4B, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 14 ESTs, 1 long SRA read, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030289116.3
SIO_010081: UBE4B
subclass of: SO_0000673
so part of: UBE4B
location: join(931159..931353,935693..935879,937925..938060,938581..938668,939000..939144,939675..939903,940359..940763,941609..941722,943884..944025,944512..944612,945298..945412,946963..947046,948602..948658,949018..949134,949249..949347,949797..949910,950397..950595,950805..950943,952922..953021,953662..953789,954151..954249,954639..954874,955575..955701,955993..956137,957195..957329,957725..957916,960084..960258,960712..960858,961177..962472)
location: region:931159-962472:1
so has part: feature:931159-931353:1:exon
so has part: feature:935693-935879:1:exon
so has part: feature:937925-938060:1:exon
so has part: feature:938581-938668:1:exon
so has part: feature:939000-939144:1:exon
so has part: feature:939675-939903:1:exon
so has part: feature:940359-940763:1:exon
so has part: feature:941609-941722:1:exon
so has part: feature:943884-944025:1:exon
so has part: feature:944512-944612:1:exon
so has part: feature:945298-945412:1:exon
so has part: feature:946963-947046:1:exon
so has part: feature:948602-948658:1:exon
so has part: feature:949018-949134:1:exon
so has part: feature:949249-949347:1:exon
so has part: feature:949797-949910:1:exon
so has part: feature:950397-950595:1:exon
so has part: feature:950805-950943:1:exon
so has part: feature:952922-953021:1:exon
so has part: feature:953662-953789:1:exon
so has part: feature:954151-954249:1:exon
so has part: feature:954639-954874:1:exon
so has part: feature:955575-955701:1:exon
so has part: feature:955993-956137:1:exon
so has part: feature:957195-957329:1:exon
so has part: feature:957725-957916:1:exon
so has part: feature:960084-960258:1:exon
so has part: feature:960712-960858:1:exon
so has part: feature:961177-962472:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:931159-931353:1:exon

position:931353:1
position: 931353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:935693-935879:1:exon

position:935693:1
position: 935693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:935879:1
position: 935879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:937925-938060:1:exon

position:937925:1
position: 937925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:938060:1
position: 938060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:938581-938668:1:exon

position:938581:1
position: 938581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:938668:1
position: 938668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:939000-939144:1:exon

position:939000:1
position: 939000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:939144:1
position: 939144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:939675-939903:1:exon

position:939675:1
position: 939675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:939903:1
position: 939903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:940359-940763:1:exon

position:940359:1
position: 940359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:940763:1
position: 940763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:941609-941722:1:exon

position:941609:1
position: 941609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:941722:1
position: 941722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:943884-944025:1:exon

position:943884:1
position: 943884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:944025:1
position: 944025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:944512-944612:1:exon

position:944512:1
position: 944512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:944612:1
position: 944612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:945298-945412:1:exon

position:945298:1
position: 945298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:945412:1
position: 945412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:946963-947046:1:exon

position:946963:1
position: 946963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:947046:1
position: 947046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:948602-948658:1:exon

position:948602:1
position: 948602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:948658:1
position: 948658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:949018-949134:1:exon

position:949018:1
position: 949018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:949134:1
position: 949134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:949249-949347:1:exon

position:949249:1
position: 949249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:949347:1
position: 949347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:949797-949910:1:exon

position:949797:1
position: 949797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:949910:1
position: 949910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:950397-950595:1:exon

position:950397:1
position: 950397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:950595:1
position: 950595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:950805-950943:1:exon

position:950805:1
position: 950805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:950943:1
position: 950943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:952922-953021:1:exon

position:952922:1
position: 952922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:953021:1
position: 953021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:953662-953789:1:exon

position:953662:1
position: 953662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:953789:1
position: 953789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:954151-954249:1:exon

position:954151:1
position: 954151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:954249:1
position: 954249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:954639-954874:1:exon

position:954639:1
position: 954639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:954874:1
position: 954874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:955575-955701:1:exon

position:955575:1
position: 955575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:955701:1
position: 955701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:955993-956137:1:exon

position:955993:1
position: 955993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:956137:1
position: 956137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:957195-957329:1:exon

position:957195:1
position: 957195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:957329:1
position: 957329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:957725-957916:1:exon

position:957725:1
position: 957725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:957916:1
position: 957916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:960084-960258:1:exon

position:960084:1
position: 960084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:960258:1
position: 960258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:960712-960858:1:exon

position:960712:1
position: 960712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:960858:1
position: 960858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:961177-962472:1:exon

position:961177:1
position: 961177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

UBE4B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: UBE4B
product: ubiquitination factor E4B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 14 ESTs, 1 long SRA read, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_030289117.3
SIO_010081: UBE4B
subclass of: SO_0000673
so part of: UBE4B
location: join(931160..931353,935693..935879,937925..938060,938581..938668,939000..939144,939675..939903,940359..940763,943884..944025,944512..944612,945298..945412,946963..947046,948602..948658,949018..949134,949249..949347,949797..949910,950397..950595,950805..950943,952922..953021,953662..953789,954151..954249,954639..954874,955575..955701,955993..956137,957195..957329,957725..957916,960084..960258,960712..960858,961177..962472)
location: region:931160-962472:1
so has part: feature:931160-931353:1:exon
so has part: feature:935693-935879:1:exon
so has part: feature:937925-938060:1:exon
so has part: feature:938581-938668:1:exon
so has part: feature:939000-939144:1:exon
so has part: feature:939675-939903:1:exon
so has part: feature:940359-940763:1:exon
so has part: feature:943884-944025:1:exon
so has part: feature:944512-944612:1:exon
so has part: feature:945298-945412:1:exon
so has part: feature:946963-947046:1:exon
so has part: feature:948602-948658:1:exon
so has part: feature:949018-949134:1:exon
so has part: feature:949249-949347:1:exon
so has part: feature:949797-949910:1:exon
so has part: feature:950397-950595:1:exon
so has part: feature:950805-950943:1:exon
so has part: feature:952922-953021:1:exon
so has part: feature:953662-953789:1:exon
so has part: feature:954151-954249:1:exon
so has part: feature:954639-954874:1:exon
so has part: feature:955575-955701:1:exon
so has part: feature:955993-956137:1:exon
so has part: feature:957195-957329:1:exon
so has part: feature:957725-957916:1:exon
so has part: feature:960084-960258:1:exon
so has part: feature:960712-960858:1:exon
so has part: feature:961177-962472:1:exon

position:931160:1
position: 931160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:931160-931353:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:935693-935879:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:937925-938060:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:938581-938668:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:939000-939144:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:939675-939903:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:940359-940763:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:943884-944025:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:944512-944612:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:945298-945412:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:946963-947046:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:948602-948658:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:949018-949134:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:949249-949347:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:949797-949910:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:950397-950595:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:950805-950943:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:952922-953021:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:953662-953789:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:954151-954249:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:954639-954874:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:955575-955701:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:955993-956137:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:957195-957329:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:957725-957916:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:960084-960258:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:960712-960858:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:961177-962472:1:exon

UBE4B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: UBE4B
product: ubiquitination factor E4B, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 15 ESTs, 1 long SRA read, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 87 samples with support for all annotated introns
transcript id: XM_012570442.4
SIO_010081: UBE4B
subclass of: SO_0000673
so part of: UBE4B
location: join(931161..931353,935693..935879,937925..938060,938581..938668,939000..939144,939675..939903,943884..944025,944512..944612,945298..945412,946963..947046,948602..948658,949018..949134,949249..949347,949797..949910,950397..950595,950805..950943,952922..953021,953662..953789,954151..954249,954639..954874,955575..955701,955993..956137,957195..957329,957725..957916,960084..960258,960712..960858,961177..962472)
location: region:931161-962472:1
so has part: feature:931161-931353:1:exon
so has part: feature:935693-935879:1:exon
so has part: feature:937925-938060:1:exon
so has part: feature:938581-938668:1:exon
so has part: feature:939000-939144:1:exon
so has part: feature:939675-939903:1:exon
so has part: feature:943884-944025:1:exon
so has part: feature:944512-944612:1:exon
so has part: feature:945298-945412:1:exon
so has part: feature:946963-947046:1:exon
so has part: feature:948602-948658:1:exon
so has part: feature:949018-949134:1:exon
so has part: feature:949249-949347:1:exon
so has part: feature:949797-949910:1:exon
so has part: feature:950397-950595:1:exon
so has part: feature:950805-950943:1:exon
so has part: feature:952922-953021:1:exon
so has part: feature:953662-953789:1:exon
so has part: feature:954151-954249:1:exon
so has part: feature:954639-954874:1:exon
so has part: feature:955575-955701:1:exon
so has part: feature:955993-956137:1:exon
so has part: feature:957195-957329:1:exon
so has part: feature:957725-957916:1:exon
so has part: feature:960084-960258:1:exon
so has part: feature:960712-960858:1:exon
so has part: feature:961177-962472:1:exon

position:931161:1
position: 931161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:931161-931353:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:935693-935879:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:937925-938060:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:938581-938668:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:939000-939144:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:939675-939903:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:943884-944025:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:944512-944612:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:945298-945412:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:946963-947046:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:948602-948658:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:949018-949134:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:949249-949347:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:949797-949910:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:950397-950595:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:950805-950943:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:952922-953021:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:953662-953789:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:954151-954249:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:954639-954874:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:955575-955701:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:955993-956137:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:957195-957329:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:957725-957916:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:960084-960258:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:960712-960858:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:961177-962472:1:exon

UBE4B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: UBE4B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin conjugation factor E4 B isoform X1
translation: MEELSADEIRRRRLARLAGGSSSQPSTPLTSPQRETPPGPPGAAPTPGPSHSLGLNVHSMTPATSPIGASGVAHRSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDSVSCEKSMSQVDVDSGIENMEVDENDRREKRSLTDKEPLSGSEVSEEQSLQLVCKIFRVSWKDRDRDVIFLNSLSAQFKQNPKEVFSDFKDLIGQILMEVLMMSTQARDENPFASLTATSQPIAAAARSPDRSLILNMGSNPGSSPMFCNVGSFGSSSLSSLYGTSPAPPTNFTSYVPMTGSSLTPPASSVATPAVAPISVSSQLPAASPSWTQPSSARYRPYTVAHPGGSAAGPRSLGISIPSSSPSPPALAAGPAAMPLIPSRHRPAAVLPPLFAASPGAWRRRPSLQSRIPPSLYDNPFSLLLLAVSDVSEDSSDEENEDDDFSCVQFGSSVGGSGSSSVSDSCSDHFTIENCKETEMLNYLIECFDRVGIEERKAPKMCSQPTVSQLLSNIRSQCISHAALVLQGSLTQPRSLQQQSLLVPYMLCRNLPFGFIQELVRTTYQDEEVFKQIFIPILQGLAVASKECSLDSDNFKYPLMALCELCEIKFGKTHPMCSLVVSLPLWLPKSLSPGAGRELQRLSYLGAFFSLSVFAEDDNKVVEKYFSGPAITLENTRVVSQSLQHYLELARQELFKILHSILLNGDTREAALSYMAAVVNANMKKAQMQTDDRLVSTDGFMLNFLWVLQQLSTKIKLETVDPMYIFHPRCRIELPTDETRVKATMEEVAAWIAELYRDPSPFSEPKFPTECFFLTLHAHHLSILPSCRRYIRRLRAIRELNRTVEDLKNNESQWKDSPLATRHREMLKRCKTQLKKLVRCKACADAGLLDENFLRRCLNFYGMVIQLMLRILDPAYPNVKLPLTPEVPKVFASLPEFYVEDVAEFLFFIVQYAPQVLYEPCTQDIVMFLVVMLCNQNYIRNPYLVAKLVEVMFMTNPAVQPRTQKFFEMIENHPLSTKLLVPSLMKFYTDVEHTGATSEFYDKFTIRYHISTIFKSLWQNIAHHGTFMEEFNSGKQFVRYINMLINDTTFLLDESLESLKRIHEVQEEMKNKEQWDLLPRDQQQARQSQLAQDERVSRSYLALATETVDMFHILTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPEKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSKELFEEVISKMRKAGIKSTIAIEKFKLLAEKVEEIVAKNARAEIDYSDAPDEFRDPLMDTLMTDPVRLPSGTIMDRSIILRHLLNSSTDPFNRQTLTENMLEPVPELKEQIQAWMRDKQNDH
SIO_010081: UBE4B
subclass of: SO_0000673
so part of: UBE4B
location: join(931330..931353,935693..935879,937925..938060,938581..938668,939000..939144,939675..939903,940359..940763,941609..941722,943884..944025,944512..944612,945298..945412,946963..947046,948602..948658,949018..949134,949249..949347,949797..949910,950397..950595,950805..950943,952922..953021,953662..953789,954151..954249,954639..954874,955575..955701,955993..956137,957195..957329,957725..957916,960084..960258,960712..960858,961177..961235)
location: region:931330-961235:1
so has part: feature:931330-931353:1:exon
so has part: feature:935693-935879:1:exon
so has part: feature:937925-938060:1:exon
so has part: feature:938581-938668:1:exon
so has part: feature:939000-939144:1:exon
so has part: feature:939675-939903:1:exon
so has part: feature:940359-940763:1:exon
so has part: feature:941609-941722:1:exon
so has part: feature:943884-944025:1:exon
so has part: feature:944512-944612:1:exon
so has part: feature:945298-945412:1:exon
so has part: feature:946963-947046:1:exon
so has part: feature:948602-948658:1:exon
so has part: feature:949018-949134:1:exon
so has part: feature:949249-949347:1:exon
so has part: feature:949797-949910:1:exon
so has part: feature:950397-950595:1:exon
so has part: feature:950805-950943:1:exon
so has part: feature:952922-953021:1:exon
so has part: feature:953662-953789:1:exon
so has part: feature:954151-954249:1:exon
so has part: feature:954639-954874:1:exon
so has part: feature:955575-955701:1:exon
so has part: feature:955993-956137:1:exon
so has part: feature:957195-957329:1:exon
so has part: feature:957725-957916:1:exon
so has part: feature:960084-960258:1:exon
so has part: feature:960712-960858:1:exon
so has part: feature:961177-961235:1:exon

XP_030144976.3
type: Protein
SIO_000068: ncbiprotein

position:931330:1
position: 931330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:961235:1
position: 961235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:931330-931353:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:935693-935879:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:937925-938060:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:938581-938668:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:939000-939144:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:939675-939903:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:940359-940763:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:941609-941722:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:943884-944025:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:944512-944612:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:945298-945412:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:946963-947046:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:948602-948658:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:949018-949134:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:949249-949347:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:949797-949910:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:950397-950595:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:950805-950943:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:952922-953021:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:953662-953789:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:954151-954249:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:954639-954874:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:955575-955701:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:955993-956137:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:957195-957329:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:957725-957916:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:960084-960258:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:960712-960858:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:961177-961235:1:exon

UBE4B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: UBE4B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin conjugation factor E4 B isoform X2
translation: MEELSADEIRRRRLARLAGGSSSQPSTPLTSPQRETPPGPPGAAPTPGPSHSLGLNVHSMTPATSPIGASGVAHRSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDSVSCEKSMSQVDVDSGIENMEVDENDRREKRSLTDKEPLSGSEVSEEQSLQLVCKIFRVSWKDRDRDVIFLNSLSAQFKQNPKEVFSDFKDLIGQILMEVLMMSTQARDENPFASLTATSQPIAAAARSPDRSLILNMGSNPGSSPMFCNVGSFGSSSLSSLYGTSPAPPTNFTSYVPMTGSSLTPPASSVATPAVAPISVSSQLPAASPSWTQPSSARYRPYTVAHPGGSAAGPRSLGISIPSSSPSPPALAAGPAAMPLIPSRHRPAAVLPPLFAASPGAWRRRPSLQSRIPPSVGGSGSSSVSDSCSDHFTIENCKETEMLNYLIECFDRVGIEERKAPKMCSQPTVSQLLSNIRSQCISHAALVLQGSLTQPRSLQQQSLLVPYMLCRNLPFGFIQELVRTTYQDEEVFKQIFIPILQGLAVASKECSLDSDNFKYPLMALCELCEIKFGKTHPMCSLVVSLPLWLPKSLSPGAGRELQRLSYLGAFFSLSVFAEDDNKVVEKYFSGPAITLENTRVVSQSLQHYLELARQELFKILHSILLNGDTREAALSYMAAVVNANMKKAQMQTDDRLVSTDGFMLNFLWVLQQLSTKIKLETVDPMYIFHPRCRIELPTDETRVKATMEEVAAWIAELYRDPSPFSEPKFPTECFFLTLHAHHLSILPSCRRYIRRLRAIRELNRTVEDLKNNESQWKDSPLATRHREMLKRCKTQLKKLVRCKACADAGLLDENFLRRCLNFYGMVIQLMLRILDPAYPNVKLPLTPEVPKVFASLPEFYVEDVAEFLFFIVQYAPQVLYEPCTQDIVMFLVVMLCNQNYIRNPYLVAKLVEVMFMTNPAVQPRTQKFFEMIENHPLSTKLLVPSLMKFYTDVEHTGATSEFYDKFTIRYHISTIFKSLWQNIAHHGTFMEEFNSGKQFVRYINMLINDTTFLLDESLESLKRIHEVQEEMKNKEQWDLLPRDQQQARQSQLAQDERVSRSYLALATETVDMFHILTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPEKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSKELFEEVISKMRKAGIKSTIAIEKFKLLAEKVEEIVAKNARAEIDYSDAPDEFRDPLMDTLMTDPVRLPSGTIMDRSIILRHLLNSSTDPFNRQTLTENMLEPVPELKEQIQAWMRDKQNDH
SIO_010081: UBE4B
subclass of: SO_0000673
so part of: UBE4B
location: join(931330..931353,935693..935879,937925..938060,938581..938668,939000..939144,939675..939903,940359..940763,943884..944025,944512..944612,945298..945412,946963..947046,948602..948658,949018..949134,949249..949347,949797..949910,950397..950595,950805..950943,952922..953021,953662..953789,954151..954249,954639..954874,955575..955701,955993..956137,957195..957329,957725..957916,960084..960258,960712..960858,961177..961235)
location: region:931330-961235:1
so has part: feature:931330-931353:1:exon
so has part: feature:935693-935879:1:exon
so has part: feature:937925-938060:1:exon
so has part: feature:938581-938668:1:exon
so has part: feature:939000-939144:1:exon
so has part: feature:939675-939903:1:exon
so has part: feature:940359-940763:1:exon
so has part: feature:943884-944025:1:exon
so has part: feature:944512-944612:1:exon
so has part: feature:945298-945412:1:exon
so has part: feature:946963-947046:1:exon
so has part: feature:948602-948658:1:exon
so has part: feature:949018-949134:1:exon
so has part: feature:949249-949347:1:exon
so has part: feature:949797-949910:1:exon
so has part: feature:950397-950595:1:exon
so has part: feature:950805-950943:1:exon
so has part: feature:952922-953021:1:exon
so has part: feature:953662-953789:1:exon
so has part: feature:954151-954249:1:exon
so has part: feature:954639-954874:1:exon
so has part: feature:955575-955701:1:exon
so has part: feature:955993-956137:1:exon
so has part: feature:957195-957329:1:exon
so has part: feature:957725-957916:1:exon
so has part: feature:960084-960258:1:exon
so has part: feature:960712-960858:1:exon
so has part: feature:961177-961235:1:exon

XP_030144977.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:931330-931353:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:935693-935879:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:937925-938060:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:938581-938668:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:939000-939144:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:939675-939903:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:940359-940763:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:943884-944025:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:944512-944612:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:945298-945412:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:946963-947046:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:948602-948658:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:949018-949134:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:949249-949347:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:949797-949910:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:950397-950595:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:950805-950943:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:952922-953021:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:953662-953789:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:954151-954249:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:954639-954874:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:955575-955701:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:955993-956137:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:957195-957329:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:957725-957916:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:960084-960258:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:960712-960858:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:961177-961235:1:exon

UBE4B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: UBE4B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin conjugation factor E4 B isoform X3
translation: MEELSADEIRRRRLARLAGGSSSQPSTPLTSPQRETPPGPPGAAPTPGPSHSLGLNVHSMTPATSPIGASGVAHRSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDSVSCEKSMSQVDVDSGIENMEVDENDRREKRSLTDKEPLSGSEVSEEQSLQLVCKIFRVSWKDRDRDVIFLNSLSAQFKQNPKEVFSDFKDLIGQILMEVLMMSTQARDENPFASLTATSQPIAAAARSPDRSLILNMGSNPGSSPMFCNVGSFGSSSLSSVGGSGSSSVSDSCSDHFTIENCKETEMLNYLIECFDRVGIEERKAPKMCSQPTVSQLLSNIRSQCISHAALVLQGSLTQPRSLQQQSLLVPYMLCRNLPFGFIQELVRTTYQDEEVFKQIFIPILQGLAVASKECSLDSDNFKYPLMALCELCEIKFGKTHPMCSLVVSLPLWLPKSLSPGAGRELQRLSYLGAFFSLSVFAEDDNKVVEKYFSGPAITLENTRVVSQSLQHYLELARQELFKILHSILLNGDTREAALSYMAAVVNANMKKAQMQTDDRLVSTDGFMLNFLWVLQQLSTKIKLETVDPMYIFHPRCRIELPTDETRVKATMEEVAAWIAELYRDPSPFSEPKFPTECFFLTLHAHHLSILPSCRRYIRRLRAIRELNRTVEDLKNNESQWKDSPLATRHREMLKRCKTQLKKLVRCKACADAGLLDENFLRRCLNFYGMVIQLMLRILDPAYPNVKLPLTPEVPKVFASLPEFYVEDVAEFLFFIVQYAPQVLYEPCTQDIVMFLVVMLCNQNYIRNPYLVAKLVEVMFMTNPAVQPRTQKFFEMIENHPLSTKLLVPSLMKFYTDVEHTGATSEFYDKFTIRYHISTIFKSLWQNIAHHGTFMEEFNSGKQFVRYINMLINDTTFLLDESLESLKRIHEVQEEMKNKEQWDLLPRDQQQARQSQLAQDERVSRSYLALATETVDMFHILTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPEKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSKELFEEVISKMRKAGIKSTIAIEKFKLLAEKVEEIVAKNARAEIDYSDAPDEFRDPLMDTLMTDPVRLPSGTIMDRSIILRHLLNSSTDPFNRQTLTENMLEPVPELKEQIQAWMRDKQNDH
SIO_010081: UBE4B
subclass of: SO_0000673
so part of: UBE4B
location: join(931330..931353,935693..935879,937925..938060,938581..938668,939000..939144,939675..939903,943884..944025,944512..944612,945298..945412,946963..947046,948602..948658,949018..949134,949249..949347,949797..949910,950397..950595,950805..950943,952922..953021,953662..953789,954151..954249,954639..954874,955575..955701,955993..956137,957195..957329,957725..957916,960084..960258,960712..960858,961177..961235)
location: region:931330-961235:1
so has part: feature:931330-931353:1:exon
so has part: feature:935693-935879:1:exon
so has part: feature:937925-938060:1:exon
so has part: feature:938581-938668:1:exon
so has part: feature:939000-939144:1:exon
so has part: feature:939675-939903:1:exon
so has part: feature:943884-944025:1:exon
so has part: feature:944512-944612:1:exon
so has part: feature:945298-945412:1:exon
so has part: feature:946963-947046:1:exon
so has part: feature:948602-948658:1:exon
so has part: feature:949018-949134:1:exon
so has part: feature:949249-949347:1:exon
so has part: feature:949797-949910:1:exon
so has part: feature:950397-950595:1:exon
so has part: feature:950805-950943:1:exon
so has part: feature:952922-953021:1:exon
so has part: feature:953662-953789:1:exon
so has part: feature:954151-954249:1:exon
so has part: feature:954639-954874:1:exon
so has part: feature:955575-955701:1:exon
so has part: feature:955993-956137:1:exon
so has part: feature:957195-957329:1:exon
so has part: feature:957725-957916:1:exon
so has part: feature:960084-960258:1:exon
so has part: feature:960712-960858:1:exon
so has part: feature:961177-961235:1:exon

XP_012425896.4
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:931330-931353:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:935693-935879:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:937925-938060:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:938581-938668:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:939000-939144:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:939675-939903:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:943884-944025:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:944512-944612:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:945298-945412:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:946963-947046:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:948602-948658:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:949018-949134:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:949249-949347:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:949797-949910:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:950397-950595:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:950805-950943:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:952922-953021:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:953662-953789:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:954151-954249:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:954639-954874:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:955575-955701:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:955993-956137:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:957195-957329:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:957725-957916:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:960084-960258:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:960712-960858:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:961177-961235:1:exon

KIF1B
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: KIF1B
note: kinesin family member 1B; Derived by automated computational analysis using gene prediction method: BestRefSeq,Gnomon.
so part of: sequence
location: 965166..1042581
location: region:965166-1042581:1
so has part: feature:965166-1042581:1:exon
subclass of: SO_0000010

100534625
type: Gene
SIO_000068: ncbigene

position:965166:1
position: 965166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1042581:1
position: 1042581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:965166-1042581:1:exon

KIF1B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: KIF1B
product: kinesin family member 1B, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 49 ESTs, 33 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 59 samples with support for all annotated introns
transcript id: XM_030289079.3
SIO_010081: KIF1B
subclass of: SO_0000673
so part of: KIF1B
location: join(965166..965372,970331..970512,983760..983836,984945..985124,985477..985542,986318..986496,987151..987262,987389..987466,987630..987695,988636..988711,989006..989084,989374..989516,993119..993252,994262..994341,994703..994778,997171..997250,998255..998361,998815..998898,999062..999242,999625..999697,1010666..1010762,1011542..1011690,1011910..1012088,1013140..1013277,1019131..1019249,1020900..1020985,1021130..1021259,1021581..1021740,1022330..1022420,1022937..1023055,1023580..1023635,1026233..1026341,1026945..1027011,1027768..1027852,1028114..1028219,1031244..1031358,1031899..1032032,1032545..1032606,1033293..1033438,1033700..1033939,1034354..1034425,1034983..1035104,1035870..1036019,1036348..1036540,1037098..1037216,1037958..1042581)
location: region:965166-1042581:1
so has part: feature:965166-965372:1:exon
so has part: feature:970331-970512:1:exon
so has part: feature:983760-983836:1:exon
so has part: feature:984945-985124:1:exon
so has part: feature:985477-985542:1:exon
so has part: feature:986318-986496:1:exon
so has part: feature:987151-987262:1:exon
so has part: feature:987389-987466:1:exon
so has part: feature:987630-987695:1:exon
so has part: feature:988636-988711:1:exon
so has part: feature:989006-989084:1:exon
so has part: feature:989374-989516:1:exon
so has part: feature:993119-993252:1:exon
so has part: feature:994262-994341:1:exon
so has part: feature:994703-994778:1:exon
so has part: feature:997171-997250:1:exon
so has part: feature:998255-998361:1:exon
so has part: feature:998815-998898:1:exon
so has part: feature:999062-999242:1:exon
so has part: feature:999625-999697:1:exon
so has part: feature:1010666-1010762:1:exon
so has part: feature:1011542-1011690:1:exon
so has part: feature:1011910-1012088:1:exon
so has part: feature:1013140-1013277:1:exon
so has part: feature:1019131-1019249:1:exon
so has part: feature:1020900-1020985:1:exon
so has part: feature:1021130-1021259:1:exon
so has part: feature:1021581-1021740:1:exon
so has part: feature:1022330-1022420:1:exon
so has part: feature:1022937-1023055:1:exon
so has part: feature:1023580-1023635:1:exon
so has part: feature:1026233-1026341:1:exon
so has part: feature:1026945-1027011:1:exon
so has part: feature:1027768-1027852:1:exon
so has part: feature:1028114-1028219:1:exon
so has part: feature:1031244-1031358:1:exon
so has part: feature:1031899-1032032:1:exon
so has part: feature:1032545-1032606:1:exon
so has part: feature:1033293-1033438:1:exon
so has part: feature:1033700-1033939:1:exon
so has part: feature:1034354-1034425:1:exon
so has part: feature:1034983-1035104:1:exon
so has part: feature:1035870-1036019:1:exon
so has part: feature:1036348-1036540:1:exon
so has part: feature:1037098-1037216:1:exon
so has part: feature:1037958-1042581:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:965166-965372:1:exon

position:965372:1
position: 965372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:970331-970512:1:exon

position:970331:1
position: 970331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:970512:1
position: 970512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:983760-983836:1:exon

position:983760:1
position: 983760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:983836:1
position: 983836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:984945-985124:1:exon

position:984945:1
position: 984945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:985124:1
position: 985124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:985477-985542:1:exon

position:985477:1
position: 985477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:985542:1
position: 985542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:986318-986496:1:exon

position:986318:1
position: 986318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:986496:1
position: 986496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:987151-987262:1:exon

position:987151:1
position: 987151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:987262:1
position: 987262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:987389-987466:1:exon

position:987389:1
position: 987389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:987466:1
position: 987466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:987630-987695:1:exon

position:987630:1
position: 987630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:987695:1
position: 987695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:988636-988711:1:exon

position:988636:1
position: 988636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:988711:1
position: 988711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:989006-989084:1:exon

position:989006:1
position: 989006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:989084:1
position: 989084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:989374-989516:1:exon

position:989374:1
position: 989374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:989516:1
position: 989516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:993119-993252:1:exon

position:993119:1
position: 993119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:993252:1
position: 993252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:994262-994341:1:exon

position:994262:1
position: 994262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:994341:1
position: 994341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:994703-994778:1:exon

position:994703:1
position: 994703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:994778:1
position: 994778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:997171-997250:1:exon

position:997171:1
position: 997171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:997250:1
position: 997250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:998255-998361:1:exon

position:998255:1
position: 998255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:998361:1
position: 998361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:998815-998898:1:exon

position:998815:1
position: 998815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:998898:1
position: 998898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:999062-999242:1:exon

position:999062:1
position: 999062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:999242:1
position: 999242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:999625-999697:1:exon

position:999625:1
position: 999625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:999697:1
position: 999697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1010666-1010762:1:exon

position:1010666:1
position: 1010666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1010762:1
position: 1010762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1011542-1011690:1:exon

position:1011542:1
position: 1011542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1011690:1
position: 1011690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1011910-1012088:1:exon

position:1011910:1
position: 1011910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1012088:1
position: 1012088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1013140-1013277:1:exon

position:1013140:1
position: 1013140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1013277:1
position: 1013277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1019131-1019249:1:exon

position:1019131:1
position: 1019131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1019249:1
position: 1019249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1020900-1020985:1:exon

position:1020900:1
position: 1020900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1020985:1
position: 1020985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1021130-1021259:1:exon

position:1021130:1
position: 1021130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1021259:1
position: 1021259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:1021581-1021740:1:exon

position:1021581:1
position: 1021581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1021740:1
position: 1021740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:1022330-1022420:1:exon

position:1022330:1
position: 1022330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1022420:1
position: 1022420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:1022937-1023055:1:exon

position:1022937:1
position: 1022937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1023055:1
position: 1023055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:1023580-1023635:1:exon

position:1023580:1
position: 1023580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1023635:1
position: 1023635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:1026233-1026341:1:exon

position:1026233:1
position: 1026233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1026341:1
position: 1026341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:1026945-1027011:1:exon

position:1026945:1
position: 1026945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1027011:1
position: 1027011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:1027768-1027852:1:exon

position:1027768:1
position: 1027768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1027852:1
position: 1027852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:1028114-1028219:1:exon

position:1028114:1
position: 1028114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1028219:1
position: 1028219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:1031244-1031358:1:exon

position:1031244:1
position: 1031244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1031358:1
position: 1031358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:1031899-1032032:1:exon

position:1031899:1
position: 1031899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1032032:1
position: 1032032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:1032545-1032606:1:exon

position:1032545:1
position: 1032545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1032606:1
position: 1032606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:1033293-1033438:1:exon