Taeniopygia guttata isolate Blue55 chromosome 11, bTaeGut1.4.pri, whole genome shotgun sequence.
type: Entry
definition: Taeniopygia guttata isolate Blue55 chromosome 11, bTaeGut1.4.pri, whole genome shotgun sequence.
sequence version: NC_044223.2
sequence date: 2021-05-26
sequence: sequence
division: CON
label: NC_044223.2
type: RefSeq
SIO_000068: refseq
dblink: PRJNA558048
dblink: SAMN02981239
keyword: WGS
keyword: RefSeq
source: Taeniopygia guttata (zebra finch)
organism: Taeniopygia guttata
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Taeniopygia.
reference: 1
references: 33911273
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM012093.2.\nOn May 24, 2021 this sequence version replaced NC_044223.1.\nAssembly name: bTaeGut1.4.pri\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2021/05/04. The original whole-genome shotgun project has the\naccession RRCB00000000.2.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 09-APR-2021\nAssembly Method :: FALCON v. 5.1.1; FALCON unzip v.\n Nov2017(uc4); Purge_dups v. 1.0.1;\n Scaff10X v. 4.1.0; Bionano Solve\n BspQI/BssSI v. 3.4; Salsa2 v. 2.2.; Arrow\n polishing v. variantCaller 2.3.3; Merfin\n filtering v. 0.1; longranger align v.\n 2.2.2; freebayes polishing v. 1.3.1;\n gEVAL manual curation v. 2021-04-09; VGP\n pipeline v. 1.7\nAssembly Name :: bTaeGut1.4.pri\nDiploid :: Principal Pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 88.2x\nSequencing Technology :: PacBio RSII; 10X Genomics linked reads;\n Bionano Genomics two enzymes; Arima\n Genomics Hi-C\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Taeniopygia guttata Annotation\n Release 106\nAnnotation Version :: 106\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.6\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 21108237
topology: linear
so has quality: SO_0000987
location: 1..21108237
location: region:1-21108237:1
RO_0002162: 59729

NC_044223
type: RefSeq
SIO_000068: refseq

PRJNA558048
type: BioProject
SIO_000068: bioproject

SAMN02981239
type: BioSample
SIO_000068: biosample

1
title: Towards complete and error-free genome assemblies of all vertebrate species
author: Rhie, A.
author: McCarthy, S.A.
author: Fedrigo, O.
author: Damas, J.
author: Formenti, G.
author: Koren, S.
author: Uliano-Silva, M.
author: Chow, W.
author: Fungtammasan, A.
author: Kim, J.
author: Lee, C.
author: Ko, B.J.
author: Chaisson, M.
author: Gedman, G.L.
author: Cantin, L.J.
author: Thibaud-Nissen, F.
author: Haggerty, L.
author: Bista, I.
author: Smith, M.
author: Haase, B.
author: Mountcastle, J.
author: Winkler, S.
author: Paez, S.
author: Howard, J.
author: Vernes, S.C.
author: Lama, T.M.
author: Grutzner, F.
author: Warren, W.C.
author: Balakrishnan, C.N.
author: Burt, D.
author: George, J.M.
author: Biegler, M.T.
author: Iorns, D.
author: Digby, A.
author: Eason, D.
author: Robertson, B.
author: Edwards, T.
author: Wilkinson, M.
author: Turner, G.
author: Meyer, A.
author: Kautt, A.F.
author: Franchini, P.
author: Detrich, H.W. 3rd
author: Svardal, H.
author: Wagner, M.
author: Naylor, G.J.P.
author: Pippel, M.
author: Malinsky, M.
author: Mooney, M.
author: Simbirsky, M.
author: Hannigan, B.T.
author: Pesout, T.
author: Houck, M.
author: Misuraca, A.
author: Kingan, S.B.
author: Hall, R.
author: Kronenberg, Z.
author: Sovic, I.
author: Dunn, C.
author: Ning, Z.
author: Hastie, A.
author: Lee, J.
author: Selvaraj, S.
author: Green, R.E.
author: Putnam, N.H.
author: Gut, I.
author: Ghurye, J.
author: Garrison, E.
author: Sims, Y.
author: Collins, J.
author: Pelan, S.
author: Torrance, J.
author: Tracey, A.
author: Wood, J.
author: Dagnew, R.E.
author: Guan, D.
author: London, S.E.
author: Clayton, D.F.

33911273
type: PubMed
SIO_000068: pubmed

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21108237:1
position: 21108237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-21108237:1:source
so part of: sequence
organism: Taeniopygia guttata
mol type: genomic DNA
isolate: Blue55
chromosome: 11
sex: female
tissue type: Muscle, blood, brain
dev stage: adult
country: USA
lat lon: 36.0014 N 78.9382 W
collected by: Matt Biegler, Duke University and Rockefeller University

59729
type: Taxonomy
SIO_000068: taxonomy

LOC115492308
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC115492308
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(92647..100129)
location: region:92647-100129:-1
so has part: feature:92647-100129:-1:exon
subclass of: SO_0000011

115492308
type: Gene
SIO_000068: ncbigene

position:92647:-1
position: 92647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:100129:-1
position: 100129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92647-100129:-1:exon

LOC115492308
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC115492308
product: uncharacterized LOC115492308
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_005981656.1
SIO_010081: LOC115492308
subclass of: SO_0000673
so part of: LOC115492308
location: complement(join(92647..92832,94281..94348,100006..100129))
location: region:92647-100129:-1
so has part: feature:100006-100129:-1:exon
so has part: feature:94281-94348:-1:exon
so has part: feature:92647-92832:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:100006-100129:-1:exon

position:100006:-1
position: 100006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:94281-94348:-1:exon

position:94281:-1
position: 94281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:94348:-1
position: 94348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:92647-92832:-1:exon

position:92832:-1
position: 92832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NKD1
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: NKD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 156694..267636
location: region:156694-267636:1
so has part: feature:156694-267636:1:exon
subclass of: SO_0000010

100223800
type: Gene
SIO_000068: ncbigene

position:156694:1
position: 156694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:267636:1
position: 267636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:156694-267636:1:exon

NKD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: NKD1
product: NKD inhibitor of WNT signaling pathway 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 3 long SRA reads, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 64 samples with support for all annotated introns
transcript id: XM_012570178.4
SIO_010081: NKD1
subclass of: SO_0000673
so part of: NKD1
location: join(156694..157214,157355..157387,157803..157960,225699..225756,244000..244106,246602..246697,254775..254922,255945..256029,259790..259920,260647..267636)
location: region:156694-267636:1
so has part: feature:156694-157214:1:exon
so has part: feature:157355-157387:1:exon
so has part: feature:157803-157960:1:exon
so has part: feature:225699-225756:1:exon
so has part: feature:244000-244106:1:exon
so has part: feature:246602-246697:1:exon
so has part: feature:254775-254922:1:exon
so has part: feature:255945-256029:1:exon
so has part: feature:259790-259920:1:exon
so has part: feature:260647-267636:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:156694-157214:1:exon

position:157214:1
position: 157214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:157355-157387:1:exon

position:157355:1
position: 157355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:157387:1
position: 157387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:157803-157960:1:exon

position:157803:1
position: 157803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:157960:1
position: 157960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:225699-225756:1:exon

position:225699:1
position: 225699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:225756:1
position: 225756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:244000-244106:1:exon

position:244000:1
position: 244000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:244106:1
position: 244106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:246602-246697:1:exon

position:246602:1
position: 246602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:246697:1
position: 246697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:254775-254922:1:exon

position:254775:1
position: 254775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:254922:1
position: 254922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:255945-256029:1:exon

position:255945:1
position: 255945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:256029:1
position: 256029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:259790-259920:1:exon

position:259790:1
position: 259790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:259920:1
position: 259920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:260647-267636:1:exon

position:260647:1
position: 260647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NKD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: NKD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein naked cuticle homolog 1
translation: MGKLHSKHAAVCKPRESPEGDSFAVNASLARRGLEDWMVKQKYSGGSSSGGSSSGLPHGCQHRAVCRLSSARDLSGEGYRDTIGDEHFHLEVALPPEKTDGVCSGDEKKAEKESDTRTSSKKQLKFEELQCDVSVEEDNRQEWTFTLYDFDNNGRVTREDITSLLHTIYEVVDASVNHSPSSSKTLRVKLTVAPDSSQKKKSILLNHTDLQSARHRAENKANEEARSSEKKQRASLRYHQSENNPEQSGCYRHCVDENIERRNHYLDLAGIENYTSKFGPGSPPAAQIHDPPGRIVNQTRSRSHEPETFHAHHRKSQVVDPNHINLAESSYAKIAEIQQRLRSQDSNKHFVRSPKAQGKNVAPVHPGRAVRNKPFQGVPLPMASPSARVGQNVPYLPLQSQQIHKKHKQRAKENHQMCKTFQSPGTVVEKEHVRDLPTVILYEGQVGQMIQRHEHHHHHEHHHHYHHFYQT
SIO_010081: NKD1
subclass of: SO_0000673
so part of: NKD1
location: join(157190..157214,157355..157387,157803..157960,225699..225756,244000..244106,246602..246697,254775..254922,255945..256029,259790..259920,260647..261221)
location: region:157190-261221:1
so has part: feature:157190-157214:1:exon
so has part: feature:157355-157387:1:exon
so has part: feature:157803-157960:1:exon
so has part: feature:225699-225756:1:exon
so has part: feature:244000-244106:1:exon
so has part: feature:246602-246697:1:exon
so has part: feature:254775-254922:1:exon
so has part: feature:255945-256029:1:exon
so has part: feature:259790-259920:1:exon
so has part: feature:260647-261221:1:exon

XP_012425632.4
type: Protein
SIO_000068: ncbiprotein

position:157190:1
position: 157190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:261221:1
position: 261221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:157190-157214:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:157355-157387:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:157803-157960:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:225699-225756:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:244000-244106:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:246602-246697:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:254775-254922:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:255945-256029:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:259790-259920:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:260647-261221:1:exon

LOC115492307
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC115492307
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 301946..302936
location: region:301946-302936:1
so has part: feature:301946-302936:1:exon
subclass of: SO_0000011

115492307
type: Gene
SIO_000068: ncbigene

position:301946:1
position: 301946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:302936:1
position: 302936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:301946-302936:1:exon

LOC115492307
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC115492307
product: uncharacterized LOC115492307
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XR_005981637.1
SIO_010081: LOC115492307
subclass of: SO_0000673
so part of: LOC115492307
location: join(301946..302272,302430..302548,302836..302936)
location: region:301946-302936:1
so has part: feature:301946-302272:1:exon
so has part: feature:302430-302548:1:exon
so has part: feature:302836-302936:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:301946-302272:1:exon

position:302272:1
position: 302272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:302430-302548:1:exon

position:302430:1
position: 302430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:302548:1
position: 302548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:302836-302936:1:exon

position:302836:1
position: 302836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SNX20
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: SNX20
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(319555..327333)
location: region:319555-327333:-1
so has part: feature:319555-327333:-1:exon
subclass of: SO_0000010

100218009
type: Gene
SIO_000068: ncbigene

position:319555:-1
position: 319555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:327333:-1
position: 327333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:319555-327333:-1:exon

SNX20
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: SNX20
product: sorting nexin 20, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_030261041.3
SIO_010081: SNX20
subclass of: SO_0000673
so part of: SNX20
location: complement(join(319555..320545,323077..323228,324936..325113,327169..327333))
location: region:319555-327333:-1
so has part: feature:327169-327333:-1:exon
so has part: feature:324936-325113:-1:exon
so has part: feature:323077-323228:-1:exon
so has part: feature:319555-320545:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:327169-327333:-1:exon

position:327169:-1
position: 327169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:324936-325113:-1:exon

position:324936:-1
position: 324936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:325113:-1
position: 325113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:323077-323228:-1:exon

position:323077:-1
position: 323077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:323228:-1
position: 323228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:319555-320545:-1:exon

position:320545:-1
position: 320545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SNX20
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: SNX20
product: sorting nexin 20, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 51 samples with support for all annotated introns
transcript id: XM_002191017.5
SIO_010081: SNX20
subclass of: SO_0000673
so part of: SNX20
location: complement(join(319555..320545,323077..323228,324936..325113,327145..327328))
location: region:319555-327328:-1
so has part: feature:327145-327328:-1:exon
so has part: feature:324936-325113:-1:exon
so has part: feature:323077-323228:-1:exon
so has part: feature:319555-320545:-1:exon

position:327328:-1
position: 327328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:327145-327328:-1:exon

position:327145:-1
position: 327145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:324936-325113:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:323077-323228:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:319555-320545:-1:exon

SNX20
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: SNX20
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sorting nexin-20
translation: MDQDSHCAAERELLEAVSRITTSSTTSPSDEEENQPEAGISCQMRKENPEKDDTQDSSATLGPNSSMTTKELQEYWRNEKRQCKQIKLLFEIPSTRIVEHHLSKYVMYKIIILQTGSFDSNKSVIERRYSDFEKLHRNLLEEFSEELEDVTFPKKTLTGNFTEEIINERKLAFKDYLRLLYSMKYIRRSKKFIDFLTRPELQEAYGCLRGGQYTKALEILVEVIGLQERLTRGNPVATVPTLCAIVVCHKDLENPASAFEYGEKALARLGVHTSHRYYMPLLETMIALAYELGKDFLSLQEKLEEWKTKKDPIRVFTLKELAVREYVR
SIO_010081: SNX20
subclass of: SO_0000673
so part of: SNX20
location: complement(join(319877..320545,323077..323228,324936..325101))
location: region:319877-325101:-1
so has part: feature:324936-325101:-1:exon
so has part: feature:323077-323228:-1:exon
so has part: feature:319877-320545:-1:exon

XP_002191053.4
type: Protein
SIO_000068: ncbiprotein

position:319877:-1
position: 319877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:325101:-1
position: 325101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:324936-325101:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:323077-323228:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:319877-320545:-1:exon

SNX20
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: SNX20
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sorting nexin-20
translation: MDQDSHCAAERELLEAVSRITTSSTTSPSDEEENQPEAGISCQMRKENPEKDDTQDSSATLGPNSSMTTKELQEYWRNEKRQCKQIKLLFEIPSTRIVEHHLSKYVMYKIIILQTGSFDSNKSVIERRYSDFEKLHRNLLEEFSEELEDVTFPKKTLTGNFTEEIINERKLAFKDYLRLLYSMKYIRRSKKFIDFLTRPELQEAYGCLRGGQYTKALEILVEVIGLQERLTRGNPVATVPTLCAIVVCHKDLENPASAFEYGEKALARLGVHTSHRYYMPLLETMIALAYELGKDFLSLQEKLEEWKTKKDPIRVFTLKELAVREYVR
SIO_010081: SNX20
subclass of: SO_0000673
so part of: SNX20
location: complement(join(319877..320545,323077..323228,324936..325101))
location: region:319877-325101:-1
so has part: feature:324936-325101:-1:exon
so has part: feature:323077-323228:-1:exon
so has part: feature:319877-320545:-1:exon

XP_030116901.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:324936-325101:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:323077-323228:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:319877-320545:-1:exon

CYLD
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: CYLD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 333040..359604
location: region:333040-359604:1
so has part: feature:333040-359604:1:exon
subclass of: SO_0000010

100226672
type: Gene
SIO_000068: ncbigene

position:333040:1
position: 333040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:359604:1
position: 359604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:333040-359604:1:exon

CYLD
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: CYLD
product: CYLD lysine 63 deubiquitinase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 9 ESTs, 2 long SRA reads, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_032750489.2
SIO_010081: CYLD
subclass of: SO_0000673
so part of: CYLD
location: join(333040..333154,333646..333771,337166..337826,339045..339347,340222..340327,341363..341458,342579..342695,344189..344568,345989..346154,346984..347125,347604..347726,349015..349106,350194..350260,351665..351797,352203..352311,353290..353408,354015..354231,355528..359604)
location: region:333040-359604:1
so has part: feature:333040-333154:1:exon
so has part: feature:333646-333771:1:exon
so has part: feature:337166-337826:1:exon
so has part: feature:339045-339347:1:exon
so has part: feature:340222-340327:1:exon
so has part: feature:341363-341458:1:exon
so has part: feature:342579-342695:1:exon
so has part: feature:344189-344568:1:exon
so has part: feature:345989-346154:1:exon
so has part: feature:346984-347125:1:exon
so has part: feature:347604-347726:1:exon
so has part: feature:349015-349106:1:exon
so has part: feature:350194-350260:1:exon
so has part: feature:351665-351797:1:exon
so has part: feature:352203-352311:1:exon
so has part: feature:353290-353408:1:exon
so has part: feature:354015-354231:1:exon
so has part: feature:355528-359604:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:333040-333154:1:exon

position:333154:1
position: 333154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:333646-333771:1:exon

position:333646:1
position: 333646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:333771:1
position: 333771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:337166-337826:1:exon

position:337166:1
position: 337166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:337826:1
position: 337826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:339045-339347:1:exon

position:339045:1
position: 339045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:339347:1
position: 339347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:340222-340327:1:exon

position:340222:1
position: 340222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:340327:1
position: 340327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:341363-341458:1:exon

position:341363:1
position: 341363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:341458:1
position: 341458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:342579-342695:1:exon

position:342579:1
position: 342579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:342695:1
position: 342695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:344189-344568:1:exon

position:344189:1
position: 344189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:344568:1
position: 344568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:345989-346154:1:exon

position:345989:1
position: 345989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:346154:1
position: 346154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:346984-347125:1:exon

position:346984:1
position: 346984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:347125:1
position: 347125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:347604-347726:1:exon

position:347604:1
position: 347604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:347726:1
position: 347726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:349015-349106:1:exon

position:349015:1
position: 349015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:349106:1
position: 349106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:350194-350260:1:exon

position:350194:1
position: 350194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:350260:1
position: 350260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:351665-351797:1:exon

position:351665:1
position: 351665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:351797:1
position: 351797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:352203-352311:1:exon

position:352203:1
position: 352203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:352311:1
position: 352311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:353290-353408:1:exon

position:353290:1
position: 353290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:353408:1
position: 353408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:354015-354231:1:exon

position:354015:1
position: 354015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:354231:1
position: 354231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:355528-359604:1:exon

position:355528:1
position: 355528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CYLD
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: CYLD
product: CYLD lysine 63 deubiquitinase, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 10 ESTs, 2 long SRA reads, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_032750490.2
SIO_010081: CYLD
subclass of: SO_0000673
so part of: CYLD
location: join(333040..333154,333646..333771,337166..337826,339045..339212,340222..340327,341363..341458,342579..342695,344189..344568,345989..346154,346984..347125,347604..347726,349015..349106,350194..350260,351665..351797,352203..352311,353290..353408,354015..354231,355528..359604)
location: region:333040-359604:1
so has part: feature:333040-333154:1:exon
so has part: feature:333646-333771:1:exon
so has part: feature:337166-337826:1:exon
so has part: feature:339045-339212:1:exon
so has part: feature:340222-340327:1:exon
so has part: feature:341363-341458:1:exon
so has part: feature:342579-342695:1:exon
so has part: feature:344189-344568:1:exon
so has part: feature:345989-346154:1:exon
so has part: feature:346984-347125:1:exon
so has part: feature:347604-347726:1:exon
so has part: feature:349015-349106:1:exon
so has part: feature:350194-350260:1:exon
so has part: feature:351665-351797:1:exon
so has part: feature:352203-352311:1:exon
so has part: feature:353290-353408:1:exon
so has part: feature:354015-354231:1:exon
so has part: feature:355528-359604:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:333040-333154:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:333646-333771:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:337166-337826:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:339045-339212:1:exon

position:339212:1
position: 339212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:340222-340327:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:341363-341458:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:342579-342695:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:344189-344568:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:345989-346154:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:346984-347125:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:347604-347726:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:349015-349106:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:350194-350260:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:351665-351797:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:352203-352311:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:353290-353408:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:354015-354231:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:355528-359604:1:exon

CYLD
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: CYLD
product: CYLD lysine 63 deubiquitinase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 9 ESTs, 2 long SRA reads, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_041718502.1
SIO_010081: CYLD
subclass of: SO_0000673
so part of: CYLD
location: join(333135..333154,337166..337826,339045..339347,340222..340327,341363..341458,342579..342695,344189..344568,345989..346154,346984..347125,347604..347726,349015..349106,350194..350260,351665..351797,352203..352311,353290..353408,354015..354231,355528..359604)
location: region:333135-359604:1
so has part: feature:333135-333154:1:exon
so has part: feature:337166-337826:1:exon
so has part: feature:339045-339347:1:exon
so has part: feature:340222-340327:1:exon
so has part: feature:341363-341458:1:exon
so has part: feature:342579-342695:1:exon
so has part: feature:344189-344568:1:exon
so has part: feature:345989-346154:1:exon
so has part: feature:346984-347125:1:exon
so has part: feature:347604-347726:1:exon
so has part: feature:349015-349106:1:exon
so has part: feature:350194-350260:1:exon
so has part: feature:351665-351797:1:exon
so has part: feature:352203-352311:1:exon
so has part: feature:353290-353408:1:exon
so has part: feature:354015-354231:1:exon
so has part: feature:355528-359604:1:exon

position:333135:1
position: 333135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:333135-333154:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:337166-337826:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:339045-339347:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:340222-340327:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:341363-341458:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:342579-342695:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:344189-344568:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:345989-346154:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:346984-347125:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:347604-347726:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:349015-349106:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:350194-350260:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:351665-351797:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:352203-352311:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:353290-353408:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:354015-354231:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:355528-359604:1:exon

CYLD
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: CYLD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase CYLD isoform X1
translation: MNSGLWSQEKASSSYWEERIFYLLLQECSVIDKQTQKLLKVPKGSIGQFFQDRSSVAHSRNIPCKGKKLQIGLKILEQPHAVLFVDEKDVIEINEKLAELLLAITNCEERYSLFKSKSRLAKGVQIDIGSPVRVQLRSGDEKYPGVVRFRGPLMQERSLTGIYFGVELLEEGRGQGFTDGQYQGKQLFRCDEDCGVFVALDKLELVEDDDNELESDYAAPVDAMQVELPPLEINSRVSLKIGESIEYGTVIFCDVLPGNESLGYVVGVDMDNPIGNWDGRYNGIQLCSFASVESTLLLHINDVIPETVSQDRRPPKLAYTSRSGDKGLFNHSKPKAIGSTSEPGNRSRSEVFYTLNGSSVDSQPQTKTKSPWYIDEAAEDPSKSLTDSSPGFGHSSPPLQPPLTNSVSTENRFHSLPFSLTKTTSTNGTIGHSPLSLSVQSVMGDVNTTATQESPSTASPIGNSHGLEAGSLAEVKENPPFYGVIRWIGQPPGVNEVLAGLELEDECAGCTDGTFKGTRYFTCAPKKALFVKLKSCRPDSRFASLQPVSNQIERCNSLAFGGYLSEVVEENTPPKMEKEGLETMIGKKKGIQGHYNSCYLDSTLFCLFSFSSVLDTVLLRPKEMNDVEYYSETQELLRTEIVNPLRIYGYVCATKIMKLRKILEKVEAASGFTSEEKDPEEFLNILFHHILRVEPLLKIRSAGQKVQDCYFYQIFMDKNEKVGVPTIQQLLEWSFINSNLKFAEAPSCLIIQMPRFGKDFKMFNKIFPSLELNITDLLEDTPRQCRICRGLAMYECRECYEDTDISAGKIKQFCKTCNTQVHLHPKRQSHKFNPLSLPKDLPDWDWRHGCIPSQKMELFAVLCIETSHYVAFVKYGRDDSAWLFFDSMADRDGGQNGFNIPQVTPCPEVGEYLKMSLEELHSLDSRKIQGCARRLLCDAYMCMYQSPTMSLYK
SIO_010081: CYLD
subclass of: SO_0000673
so part of: CYLD
location: join(337320..337826,339045..339347,340222..340327,341363..341458,342579..342695,344189..344568,345989..346154,346984..347125,347604..347726,349015..349106,350194..350260,351665..351797,352203..352311,353290..353408,354015..354231,355528..355712)
location: region:337320-355712:1
so has part: feature:337320-337826:1:exon
so has part: feature:339045-339347:1:exon
so has part: feature:340222-340327:1:exon
so has part: feature:341363-341458:1:exon
so has part: feature:342579-342695:1:exon
so has part: feature:344189-344568:1:exon
so has part: feature:345989-346154:1:exon
so has part: feature:346984-347125:1:exon
so has part: feature:347604-347726:1:exon
so has part: feature:349015-349106:1:exon
so has part: feature:350194-350260:1:exon
so has part: feature:351665-351797:1:exon
so has part: feature:352203-352311:1:exon
so has part: feature:353290-353408:1:exon
so has part: feature:354015-354231:1:exon
so has part: feature:355528-355712:1:exon

XP_032606380.2
type: Protein
SIO_000068: ncbiprotein

position:337320:1
position: 337320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:355712:1
position: 355712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:337320-337826:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:339045-339347:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:340222-340327:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:341363-341458:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:342579-342695:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:344189-344568:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:345989-346154:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:346984-347125:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:347604-347726:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:349015-349106:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:350194-350260:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:351665-351797:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:352203-352311:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:353290-353408:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:354015-354231:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:355528-355712:1:exon

CYLD
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: CYLD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase CYLD isoform X1
translation: MNSGLWSQEKASSSYWEERIFYLLLQECSVIDKQTQKLLKVPKGSIGQFFQDRSSVAHSRNIPCKGKKLQIGLKILEQPHAVLFVDEKDVIEINEKLAELLLAITNCEERYSLFKSKSRLAKGVQIDIGSPVRVQLRSGDEKYPGVVRFRGPLMQERSLTGIYFGVELLEEGRGQGFTDGQYQGKQLFRCDEDCGVFVALDKLELVEDDDNELESDYAAPVDAMQVELPPLEINSRVSLKIGESIEYGTVIFCDVLPGNESLGYVVGVDMDNPIGNWDGRYNGIQLCSFASVESTLLLHINDVIPETVSQDRRPPKLAYTSRSGDKGLFNHSKPKAIGSTSEPGNRSRSEVFYTLNGSSVDSQPQTKTKSPWYIDEAAEDPSKSLTDSSPGFGHSSPPLQPPLTNSVSTENRFHSLPFSLTKTTSTNGTIGHSPLSLSVQSVMGDVNTTATQESPSTASPIGNSHGLEAGSLAEVKENPPFYGVIRWIGQPPGVNEVLAGLELEDECAGCTDGTFKGTRYFTCAPKKALFVKLKSCRPDSRFASLQPVSNQIERCNSLAFGGYLSEVVEENTPPKMEKEGLETMIGKKKGIQGHYNSCYLDSTLFCLFSFSSVLDTVLLRPKEMNDVEYYSETQELLRTEIVNPLRIYGYVCATKIMKLRKILEKVEAASGFTSEEKDPEEFLNILFHHILRVEPLLKIRSAGQKVQDCYFYQIFMDKNEKVGVPTIQQLLEWSFINSNLKFAEAPSCLIIQMPRFGKDFKMFNKIFPSLELNITDLLEDTPRQCRICRGLAMYECRECYEDTDISAGKIKQFCKTCNTQVHLHPKRQSHKFNPLSLPKDLPDWDWRHGCIPSQKMELFAVLCIETSHYVAFVKYGRDDSAWLFFDSMADRDGGQNGFNIPQVTPCPEVGEYLKMSLEELHSLDSRKIQGCARRLLCDAYMCMYQSPTMSLYK
SIO_010081: CYLD
subclass of: SO_0000673
so part of: CYLD
location: join(337320..337826,339045..339347,340222..340327,341363..341458,342579..342695,344189..344568,345989..346154,346984..347125,347604..347726,349015..349106,350194..350260,351665..351797,352203..352311,353290..353408,354015..354231,355528..355712)
location: region:337320-355712:1
so has part: feature:337320-337826:1:exon
so has part: feature:339045-339347:1:exon
so has part: feature:340222-340327:1:exon
so has part: feature:341363-341458:1:exon
so has part: feature:342579-342695:1:exon
so has part: feature:344189-344568:1:exon
so has part: feature:345989-346154:1:exon
so has part: feature:346984-347125:1:exon
so has part: feature:347604-347726:1:exon
so has part: feature:349015-349106:1:exon
so has part: feature:350194-350260:1:exon
so has part: feature:351665-351797:1:exon
so has part: feature:352203-352311:1:exon
so has part: feature:353290-353408:1:exon
so has part: feature:354015-354231:1:exon
so has part: feature:355528-355712:1:exon

XP_041574436.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:337320-337826:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:339045-339347:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:340222-340327:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:341363-341458:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:342579-342695:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:344189-344568:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:345989-346154:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:346984-347125:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:347604-347726:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:349015-349106:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:350194-350260:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:351665-351797:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:352203-352311:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:353290-353408:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:354015-354231:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:355528-355712:1:exon

CYLD
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: CYLD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase CYLD isoform X2
translation: MNSGLWSQEKASSSYWEERIFYLLLQECSVIDKQTQKLLKVPKGSIGQFFQDRSSVAHSRNIPCKGKKLQIGLKILEQPHAVLFVDEKDVIEINEKLAELLLAITNCEERYSLFKSKSRLAKGVQIDIGSPVRVQLRSGDEKYPGVVRFRGPLMQERSLTGIYFGVELLEEGRGQGFTDGQYQGKQLFRCDEDCGVFVALDKLELVEDDDNELESDYAAPVDAMQDNPIGNWDGRYNGIQLCSFASVESTLLLHINDVIPETVSQDRRPPKLAYTSRSGDKGLFNHSKPKAIGSTSEPGNRSRSEVFYTLNGSSVDSQPQTKTKSPWYIDEAAEDPSKSLTDSSPGFGHSSPPLQPPLTNSVSTENRFHSLPFSLTKTTSTNGTIGHSPLSLSVQSVMGDVNTTATQESPSTASPIGNSHGLEAGSLAEVKENPPFYGVIRWIGQPPGVNEVLAGLELEDECAGCTDGTFKGTRYFTCAPKKALFVKLKSCRPDSRFASLQPVSNQIERCNSLAFGGYLSEVVEENTPPKMEKEGLETMIGKKKGIQGHYNSCYLDSTLFCLFSFSSVLDTVLLRPKEMNDVEYYSETQELLRTEIVNPLRIYGYVCATKIMKLRKILEKVEAASGFTSEEKDPEEFLNILFHHILRVEPLLKIRSAGQKVQDCYFYQIFMDKNEKVGVPTIQQLLEWSFINSNLKFAEAPSCLIIQMPRFGKDFKMFNKIFPSLELNITDLLEDTPRQCRICRGLAMYECRECYEDTDISAGKIKQFCKTCNTQVHLHPKRQSHKFNPLSLPKDLPDWDWRHGCIPSQKMELFAVLCIETSHYVAFVKYGRDDSAWLFFDSMADRDGGQNGFNIPQVTPCPEVGEYLKMSLEELHSLDSRKIQGCARRLLCDAYMCMYQSPTMSLYK
SIO_010081: CYLD
subclass of: SO_0000673
so part of: CYLD
location: join(337320..337826,339045..339212,340222..340327,341363..341458,342579..342695,344189..344568,345989..346154,346984..347125,347604..347726,349015..349106,350194..350260,351665..351797,352203..352311,353290..353408,354015..354231,355528..355712)
location: region:337320-355712:1
so has part: feature:337320-337826:1:exon
so has part: feature:339045-339212:1:exon
so has part: feature:340222-340327:1:exon
so has part: feature:341363-341458:1:exon
so has part: feature:342579-342695:1:exon
so has part: feature:344189-344568:1:exon
so has part: feature:345989-346154:1:exon
so has part: feature:346984-347125:1:exon
so has part: feature:347604-347726:1:exon
so has part: feature:349015-349106:1:exon
so has part: feature:350194-350260:1:exon
so has part: feature:351665-351797:1:exon
so has part: feature:352203-352311:1:exon
so has part: feature:353290-353408:1:exon
so has part: feature:354015-354231:1:exon
so has part: feature:355528-355712:1:exon

XP_032606381.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:337320-337826:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:339045-339212:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:340222-340327:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:341363-341458:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:342579-342695:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:344189-344568:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:345989-346154:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:346984-347125:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:347604-347726:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:349015-349106:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:350194-350260:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:351665-351797:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:352203-352311:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:353290-353408:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:354015-354231:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:355528-355712:1:exon

LOC121470597
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121470597
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(363078..366312)
location: region:363078-366312:-1
so has part: feature:363078-366312:-1:exon
subclass of: SO_0000010

121470597
type: Gene
SIO_000068: ncbigene

position:363078:-1
position: 363078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:366312:-1
position: 366312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:363078-366312:-1:exon

LOC121470597
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC121470597
product: serine/threonine-protein kinase pim-1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041718620.1
SIO_010081: LOC121470597
subclass of: SO_0000673
so part of: LOC121470597
location: complement(join(363078..363262,363584..363760,364148..364263,364764..365014,365305..365355,365448..365551,365654..365875,366026..366121,366216..366312))
location: region:363078-366312:-1
so has part: feature:366216-366312:-1:exon
so has part: feature:366026-366121:-1:exon
so has part: feature:365654-365875:-1:exon
so has part: feature:365448-365551:-1:exon
so has part: feature:365305-365355:-1:exon
so has part: feature:364764-365014:-1:exon
so has part: feature:364148-364263:-1:exon
so has part: feature:363584-363760:-1:exon
so has part: feature:363078-363262:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:366216-366312:-1:exon

position:366216:-1
position: 366216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:366026-366121:-1:exon

position:366026:-1
position: 366026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:366121:-1
position: 366121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:365654-365875:-1:exon

position:365654:-1
position: 365654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:365875:-1
position: 365875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:365448-365551:-1:exon

position:365448:-1
position: 365448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:365551:-1
position: 365551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:365305-365355:-1:exon

position:365305:-1
position: 365305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:365355:-1
position: 365355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:364764-365014:-1:exon

position:364764:-1
position: 364764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:365014:-1
position: 365014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:364148-364263:-1:exon

position:364148:-1
position: 364148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:364263:-1
position: 364263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:363584-363760:-1:exon

position:363584:-1
position: 363584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:363760:-1
position: 363760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:363078-363262:-1:exon

position:363262:-1
position: 363262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121470597
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC121470597
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase pim-1-like
translation: MPGSSGRFGHALVAGTAWVKRRRADVASPKLKLESGLQTPWSFLHLQEAAPRQPSRAAKGFLVAAAPGSPPCQASGCSPGRRQEQSPAHDAGDSAGAALPRWPGAAAAACARCPGPALPLASPAAAGRWPLPGAQQEAGQRRQRQERYLLGPQLGSGGFGTVFSGIRLSDGSPVALKRVARESVLQWDELPDGTRVPLEVVLMQKVGSGCQNIIQLLDWFELPDSFVLVLERPQASQDLLEFLQEQGCLCEEQARWLFCQVLEAVRHCTACGVLHRDIKPENLLVDPESGDLKLIDFGCGTFLQERAFTDFAGTRVYSLPEWTWLRCYHGHAATIWSLGVLLYVMVCGSLPFQDDQAIVLGKLFFRRQLSPELQHLIRWCLAKHPADRPELEEISRHPWVWGRRF
SIO_010081: LOC121470597
subclass of: SO_0000673
so part of: LOC121470597
location: complement(join(363159..363262,363584..363760,364148..364263,364764..365014,365305..365355,365448..365551,365654..365875,366026..366121,366216..366312))
location: region:363159-366312:-1
so has part: feature:366216-366312:-1:exon
so has part: feature:366026-366121:-1:exon
so has part: feature:365654-365875:-1:exon
so has part: feature:365448-365551:-1:exon
so has part: feature:365305-365355:-1:exon
so has part: feature:364764-365014:-1:exon
so has part: feature:364148-364263:-1:exon
so has part: feature:363584-363760:-1:exon
so has part: feature:363159-363262:-1:exon

XP_041574554.1
type: Protein
SIO_000068: ncbiprotein

position:363159:-1
position: 363159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:366216-366312:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:366026-366121:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:365654-365875:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:365448-365551:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:365305-365355:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:364764-365014:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:364148-364263:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:363584-363760:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:363159-363262:-1:exon

LOC121470554
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121470554
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(394786..529937)
location: region:394786-529937:-1
so has part: feature:394786-529937:-1:exon
subclass of: SO_0000011

121470554
type: Gene
SIO_000068: ncbigene

position:394786:-1
position: 394786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:529937:-1
position: 529937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:394786-529937:-1:exon

LOC121470554
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC121470554
product: uncharacterized LOC121470554
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XR_005981586.1
SIO_010081: LOC121470554
subclass of: SO_0000673
so part of: LOC121470554
location: complement(join(394786..396029,396918..397021,407491..407585,429227..429330,508337..508602,527882..528073,528979..529937))
location: region:394786-529937:-1
so has part: feature:528979-529937:-1:exon
so has part: feature:527882-528073:-1:exon
so has part: feature:508337-508602:-1:exon
so has part: feature:429227-429330:-1:exon
so has part: feature:407491-407585:-1:exon
so has part: feature:396918-397021:-1:exon
so has part: feature:394786-396029:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:528979-529937:-1:exon

position:528979:-1
position: 528979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:527882-528073:-1:exon

position:527882:-1
position: 527882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:528073:-1
position: 528073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:508337-508602:-1:exon

position:508337:-1
position: 508337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:508602:-1
position: 508602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:429227-429330:-1:exon

position:429227:-1
position: 429227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:429330:-1
position: 429330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:407491-407585:-1:exon

position:407491:-1
position: 407491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:407585:-1
position: 407585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:396918-397021:-1:exon

position:396918:-1
position: 396918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:397021:-1
position: 397021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:394786-396029:-1:exon

position:396029:-1
position: 396029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SALL1
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: SALL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(531076..547284)
location: region:531076-547284:-1
so has part: feature:531076-547284:-1:exon
subclass of: SO_0000010

100229475
type: Gene
SIO_000068: ncbigene

position:531076:-1
position: 531076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:547284:-1
position: 547284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:531076-547284:-1:exon

SALL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: SALL1
product: spalt like transcription factor 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 26 ESTs, 6 long SRA reads, 15 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 97 samples with support for all annotated introns
transcript id: XM_012570391.4
SIO_010081: SALL1
subclass of: SO_0000673
so part of: SALL1
location: complement(join(531076..533790,534827..538236,546687..547284))
location: region:531076-547284:-1
so has part: feature:546687-547284:-1:exon
so has part: feature:534827-538236:-1:exon
so has part: feature:531076-533790:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:546687-547284:-1:exon

position:546687:-1
position: 546687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:534827-538236:-1:exon

position:534827:-1
position: 534827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:538236:-1
position: 538236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:531076-533790:-1:exon

position:533790:-1
position: 533790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SALL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: SALL1
product: spalt like transcription factor 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 26 ESTs, 3 long SRA reads, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_030282701.3
SIO_010081: SALL1
subclass of: SO_0000673
so part of: SALL1
location: complement(join(531076..533790,534827..538236,546687..546779,546871..547215))
location: region:531076-547215:-1
so has part: feature:546871-547215:-1:exon
so has part: feature:546687-546779:-1:exon
so has part: feature:534827-538236:-1:exon
so has part: feature:531076-533790:-1:exon

position:547215:-1
position: 547215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:546871-547215:-1:exon

position:546871:-1
position: 546871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:546687-546779:-1:exon

position:546779:-1
position: 546779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:534827-538236:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:531076-533790:-1:exon

SALL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: SALL1
product: spalt like transcription factor 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 23 ESTs, 1 long SRA read, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_030282703.3
SIO_010081: SALL1
subclass of: SO_0000673
so part of: SALL1
location: complement(join(531076..533790,534827..538236,544549..544657,546687..546774))
location: region:531076-546774:-1
so has part: feature:546687-546774:-1:exon
so has part: feature:544549-544657:-1:exon
so has part: feature:534827-538236:-1:exon
so has part: feature:531076-533790:-1:exon

position:546774:-1
position: 546774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:546687-546774:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:544549-544657:-1:exon

position:544549:-1
position: 544549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:544657:-1
position: 544657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:534827-538236:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:531076-533790:-1:exon

SALL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: SALL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sal-like protein 1 isoform X1
translation: MSRRKQAKPQHFQSDPDLALLSQRNGDTEKGQANRTTKNKDAHVCGRCCAEFFELSDLLQHKKNCTKNQLVLIVNENPASPSETFPPSSPSDNPDEQMNDTVNNTDQVDCSDLSEHNKLDREESMDVEASSINNSSSSSKSVNNSITSSNSSTMGTSAVTTSLPHIGDLTTLGNFSVINSNVIIENLQSTKVAVAQFSQEARCNGASSTKLAVPALMEQLLALQQQQIHQLQLIEQIRHQILLLATQNTDMPTSSSPSQGTLRTSANPLSTLSSHLSQQLAAAAGLAQSLASQSASISGVKQLPPIQLPQSNPGNTLIPSNSGSSPNINILAAAVTTPSSEKVASTIGGSQLTNPPVSASSSPAFAISSLLSPASNPLLPQPTPSNSVFSSPLSNIGTPAEDLNSLTALAQQRKSKPPNVTAFEAKSNSDEAFFKHKCRFCAKVFGSDSALQIHLRSHTGERPFKCNICGNRFSTKGNLKVHFQRHKEKYPHIQMNPYPVPEHLDNIPTSTGIPYGMSIPPEKPVTSWLDSKPVLSTLTTSVGLPLPPTIPSLTPFIKTEEPQPIPISHPSASPPCSVKSDSGTVDPTSKISNGPSDEVEAGVLPTSNGKTEENPQNTSTITNMSSSVSSPAADSGSSGVATFTNPLMPLMSEQFKAKFPFGGLLDSTPASETSKLQQLVENIDKKATDPNECIICHRVLSCQSALKMHYRTHTGERPFKCKICGRAFTTKGNLKTHYSVHRAMPPLRVQHSCPICQKKFTNAVVLQQHIRMHMGGQIPNTPVTENYPESMESDTGSFDDKNFDDIDNFSDENMEDCPDSSVPDTPKSVDASQDSLSSSPLPLEMSSIAALENQMKMINAGLAEQLQASLKSVENGSVEGDVLTNDSSSVGGDMESQSAGSPAVSESTSSMQALSPSNSTNDYHKSPSIEEKPLRALPSEFANGLSPTPANSGALDLTSSNTDKMIKEESLSMLFPFRDRGKFKNTACDICGKTFACQSALDIHYRSHTKERPFICTVCNRGFSTKGNLKQHMLTHQMRDLPSQLFEPNSSIGPSQNSSGMPANTLSSLIKTEVNGFVHGSPQDSKEAPSGLVASGPLSSATSPVLLPALPRRTPKQHYCNTCGKTFSSSSALQIHERTHTGEKPFACTICGRAFTTKGNLKVHMGTHMWNSTPARRGRRLSVDGPMTFLGGNPVKFPEMFQKDLAARSGNGDPSSFWNQYAAALSNGLAMKTNEISVIQNGGIPPAPGGLGNGGSSPISGLTGSLEKLQNSEPNAPLAGLEKMASNENGTNFRFTRFVEDNKEIVTN
SIO_010081: SALL1
subclass of: SO_0000673
so part of: SALL1
location: complement(join(533350..533790,534827..538236,546687..546762))
location: region:533350-546762:-1
so has part: feature:546687-546762:-1:exon
so has part: feature:534827-538236:-1:exon
so has part: feature:533350-533790:-1:exon

XP_012425845.3
type: Protein
SIO_000068: ncbiprotein

position:533350:-1
position: 533350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:546762:-1
position: 546762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:546687-546762:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:534827-538236:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:533350-533790:-1:exon

SALL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: SALL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sal-like protein 1 isoform X1
translation: MSRRKQAKPQHFQSDPDLALLSQRNGDTEKGQANRTTKNKDAHVCGRCCAEFFELSDLLQHKKNCTKNQLVLIVNENPASPSETFPPSSPSDNPDEQMNDTVNNTDQVDCSDLSEHNKLDREESMDVEASSINNSSSSSKSVNNSITSSNSSTMGTSAVTTSLPHIGDLTTLGNFSVINSNVIIENLQSTKVAVAQFSQEARCNGASSTKLAVPALMEQLLALQQQQIHQLQLIEQIRHQILLLATQNTDMPTSSSPSQGTLRTSANPLSTLSSHLSQQLAAAAGLAQSLASQSASISGVKQLPPIQLPQSNPGNTLIPSNSGSSPNINILAAAVTTPSSEKVASTIGGSQLTNPPVSASSSPAFAISSLLSPASNPLLPQPTPSNSVFSSPLSNIGTPAEDLNSLTALAQQRKSKPPNVTAFEAKSNSDEAFFKHKCRFCAKVFGSDSALQIHLRSHTGERPFKCNICGNRFSTKGNLKVHFQRHKEKYPHIQMNPYPVPEHLDNIPTSTGIPYGMSIPPEKPVTSWLDSKPVLSTLTTSVGLPLPPTIPSLTPFIKTEEPQPIPISHPSASPPCSVKSDSGTVDPTSKISNGPSDEVEAGVLPTSNGKTEENPQNTSTITNMSSSVSSPAADSGSSGVATFTNPLMPLMSEQFKAKFPFGGLLDSTPASETSKLQQLVENIDKKATDPNECIICHRVLSCQSALKMHYRTHTGERPFKCKICGRAFTTKGNLKTHYSVHRAMPPLRVQHSCPICQKKFTNAVVLQQHIRMHMGGQIPNTPVTENYPESMESDTGSFDDKNFDDIDNFSDENMEDCPDSSVPDTPKSVDASQDSLSSSPLPLEMSSIAALENQMKMINAGLAEQLQASLKSVENGSVEGDVLTNDSSSVGGDMESQSAGSPAVSESTSSMQALSPSNSTNDYHKSPSIEEKPLRALPSEFANGLSPTPANSGALDLTSSNTDKMIKEESLSMLFPFRDRGKFKNTACDICGKTFACQSALDIHYRSHTKERPFICTVCNRGFSTKGNLKQHMLTHQMRDLPSQLFEPNSSIGPSQNSSGMPANTLSSLIKTEVNGFVHGSPQDSKEAPSGLVASGPLSSATSPVLLPALPRRTPKQHYCNTCGKTFSSSSALQIHERTHTGEKPFACTICGRAFTTKGNLKVHMGTHMWNSTPARRGRRLSVDGPMTFLGGNPVKFPEMFQKDLAARSGNGDPSSFWNQYAAALSNGLAMKTNEISVIQNGGIPPAPGGLGNGGSSPISGLTGSLEKLQNSEPNAPLAGLEKMASNENGTNFRFTRFVEDNKEIVTN
SIO_010081: SALL1
subclass of: SO_0000673
so part of: SALL1
location: complement(join(533350..533790,534827..538236,546687..546762))
location: region:533350-546762:-1
so has part: feature:546687-546762:-1:exon
so has part: feature:534827-538236:-1:exon
so has part: feature:533350-533790:-1:exon

XP_030138561.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:546687-546762:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:534827-538236:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:533350-533790:-1:exon

SALL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: SALL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sal-like protein 1 isoform X2
translation: MNDTVNNTDQVDCSDLSEHNKLDREESMDVEASSINNSSSSSKSVNNSITSSNSSTMGTSAVTTSLPHIGDLTTLGNFSVINSNVIIENLQSTKVAVAQFSQEARCNGASSTKLAVPALMEQLLALQQQQIHQLQLIEQIRHQILLLATQNTDMPTSSSPSQGTLRTSANPLSTLSSHLSQQLAAAAGLAQSLASQSASISGVKQLPPIQLPQSNPGNTLIPSNSGSSPNINILAAAVTTPSSEKVASTIGGSQLTNPPVSASSSPAFAISSLLSPASNPLLPQPTPSNSVFSSPLSNIGTPAEDLNSLTALAQQRKSKPPNVTAFEAKSNSDEAFFKHKCRFCAKVFGSDSALQIHLRSHTGERPFKCNICGNRFSTKGNLKVHFQRHKEKYPHIQMNPYPVPEHLDNIPTSTGIPYGMSIPPEKPVTSWLDSKPVLSTLTTSVGLPLPPTIPSLTPFIKTEEPQPIPISHPSASPPCSVKSDSGTVDPTSKISNGPSDEVEAGVLPTSNGKTEENPQNTSTITNMSSSVSSPAADSGSSGVATFTNPLMPLMSEQFKAKFPFGGLLDSTPASETSKLQQLVENIDKKATDPNECIICHRVLSCQSALKMHYRTHTGERPFKCKICGRAFTTKGNLKTHYSVHRAMPPLRVQHSCPICQKKFTNAVVLQQHIRMHMGGQIPNTPVTENYPESMESDTGSFDDKNFDDIDNFSDENMEDCPDSSVPDTPKSVDASQDSLSSSPLPLEMSSIAALENQMKMINAGLAEQLQASLKSVENGSVEGDVLTNDSSSVGGDMESQSAGSPAVSESTSSMQALSPSNSTNDYHKSPSIEEKPLRALPSEFANGLSPTPANSGALDLTSSNTDKMIKEESLSMLFPFRDRGKFKNTACDICGKTFACQSALDIHYRSHTKERPFICTVCNRGFSTKGNLKQHMLTHQMRDLPSQLFEPNSSIGPSQNSSGMPANTLSSLIKTEVNGFVHGSPQDSKEAPSGLVASGPLSSATSPVLLPALPRRTPKQHYCNTCGKTFSSSSALQIHERTHTGEKPFACTICGRAFTTKGNLKVHMGTHMWNSTPARRGRRLSVDGPMTFLGGNPVKFPEMFQKDLAARSGNGDPSSFWNQYAAALSNGLAMKTNEISVIQNGGIPPAPGGLGNGGSSPISGLTGSLEKLQNSEPNAPLAGLEKMASNENGTNFRFTRFVEDNKEIVTN
SIO_010081: SALL1
subclass of: SO_0000673
so part of: SALL1
location: complement(join(533350..533790,534827..538021))
location: region:533350-538021:-1
so has part: feature:534827-538021:-1:exon
so has part: feature:533350-533790:-1:exon

XP_030138563.3
type: Protein
SIO_000068: ncbiprotein

position:538021:-1
position: 538021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:534827-538021:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:533350-533790:-1:exon

LOC115496799
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC115496799
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(563179..673752)
location: region:563179-673752:-1
so has part: feature:563179-673752:-1:exon
subclass of: SO_0000011

115496799
type: Gene
SIO_000068: ncbigene

position:563179:-1
position: 563179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:673752:-1
position: 673752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:563179-673752:-1:exon

LOC115496799
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC115496799
product: uncharacterized LOC115496799
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_005981587.1
SIO_010081: LOC115496799
subclass of: SO_0000673
so part of: LOC115496799
location: complement(join(563179..563562,567382..567588,569027..569190,570298..574049,574690..574830,614533..614603,615640..615801,630662..630706,631596..631700,641617..641699,646303..646434,662313..662495,667160..667232,673671..673752))
location: region:563179-673752:-1
so has part: feature:673671-673752:-1:exon
so has part: feature:667160-667232:-1:exon
so has part: feature:662313-662495:-1:exon
so has part: feature:646303-646434:-1:exon
so has part: feature:641617-641699:-1:exon
so has part: feature:631596-631700:-1:exon
so has part: feature:630662-630706:-1:exon
so has part: feature:615640-615801:-1:exon
so has part: feature:614533-614603:-1:exon
so has part: feature:574690-574830:-1:exon
so has part: feature:570298-574049:-1:exon
so has part: feature:569027-569190:-1:exon
so has part: feature:567382-567588:-1:exon
so has part: feature:563179-563562:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:673671-673752:-1:exon

position:673671:-1
position: 673671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:667160-667232:-1:exon

position:667160:-1
position: 667160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:667232:-1
position: 667232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:662313-662495:-1:exon

position:662313:-1
position: 662313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:662495:-1
position: 662495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:646303-646434:-1:exon

position:646303:-1
position: 646303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:646434:-1
position: 646434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:641617-641699:-1:exon

position:641617:-1
position: 641617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:641699:-1
position: 641699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:631596-631700:-1:exon

position:631596:-1
position: 631596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:631700:-1
position: 631700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:630662-630706:-1:exon

position:630662:-1
position: 630662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:630706:-1
position: 630706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:615640-615801:-1:exon

position:615640:-1
position: 615640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:615801:-1
position: 615801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:614533-614603:-1:exon

position:614533:-1
position: 614533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:614603:-1
position: 614603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:574690-574830:-1:exon

position:574690:-1
position: 574690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:574830:-1
position: 574830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:570298-574049:-1:exon

position:570298:-1
position: 570298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:574049:-1
position: 574049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:569027-569190:-1:exon

position:569027:-1
position: 569027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:569190:-1
position: 569190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:567382-567588:-1:exon

position:567382:-1
position: 567382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:567588:-1
position: 567588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:563179-563562:-1:exon

position:563562:-1
position: 563562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TOX3
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: TOX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1122569..1196803)
location: region:1122569-1196803:-1
so has part: feature:1122569-1196803:-1:exon
subclass of: SO_0000010

100232418
type: Gene
SIO_000068: ncbigene

position:1122569:-1
position: 1122569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1196803:-1
position: 1196803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1122569-1196803:-1:exon

TOX3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: TOX3
product: TOX high mobility group box family member 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 18 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 61 samples with support for all annotated introns
transcript id: XM_032750542.2
SIO_010081: TOX3
subclass of: SO_0000673
so part of: TOX3
location: complement(join(1122569..1124436,1126149..1126229,1127522..1127749,1129053..1129322,1143643..1143894,1147808..1147873,1196074..1196803))
location: region:1122569-1196803:-1
so has part: feature:1196074-1196803:-1:exon
so has part: feature:1147808-1147873:-1:exon
so has part: feature:1143643-1143894:-1:exon
so has part: feature:1129053-1129322:-1:exon
so has part: feature:1127522-1127749:-1:exon
so has part: feature:1126149-1126229:-1:exon
so has part: feature:1122569-1124436:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1196074-1196803:-1:exon

position:1196074:-1
position: 1196074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1147808-1147873:-1:exon

position:1147808:-1
position: 1147808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1147873:-1
position: 1147873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1143643-1143894:-1:exon

position:1143643:-1
position: 1143643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1143894:-1
position: 1143894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1129053-1129322:-1:exon

position:1129053:-1
position: 1129053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1129322:-1
position: 1129322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1127522-1127749:-1:exon

position:1127522:-1
position: 1127522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1127749:-1
position: 1127749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1126149-1126229:-1:exon

position:1126149:-1
position: 1126149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1126229:-1
position: 1126229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1122569-1124436:-1:exon

position:1124436:-1
position: 1124436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TOX3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: TOX3
product: TOX high mobility group box family member 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 18 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 72 samples with support for all annotated introns
transcript id: XM_032750541.2
SIO_010081: TOX3
subclass of: SO_0000673
so part of: TOX3
location: complement(join(1122569..1124436,1126149..1126229,1127522..1127749,1129053..1129322,1143643..1143897,1147808..1147873,1196074..1196803))
location: region:1122569-1196803:-1
so has part: feature:1196074-1196803:-1:exon
so has part: feature:1147808-1147873:-1:exon
so has part: feature:1143643-1143897:-1:exon
so has part: feature:1129053-1129322:-1:exon
so has part: feature:1127522-1127749:-1:exon
so has part: feature:1126149-1126229:-1:exon
so has part: feature:1122569-1124436:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1196074-1196803:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1147808-1147873:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1143643-1143897:-1:exon

position:1143897:-1
position: 1143897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1129053-1129322:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1127522-1127749:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1126149-1126229:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1122569-1124436:-1:exon

TOX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: TOX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TOX high mobility group box family member 3 isoform X2
translation: MDVRFYPAAAGSALPGDPSNLDFAQCLGYYNYNKFGNNNNYMNMAEANNAFLAANETFHTPSLGDEEFEIPPITPPPESDPSLGMADILLPFQGLGDQLPAQGNEFTPQFPPQSLDLPSITISRNLVEQDGVIHSNGLHMDQSHTQVSQYRQDHSLIMRSIVHMTDAAHSGIMPPSQLTTINQSQLSAQLGLNLGGTNLPHTSPSPPASKSATPSPSSSINEEDADESNRATGEKRAAPDSGKKPKTPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGDVSKIVASMWDSLGEEQKQVYKRKTEAAKKEYLKALAAYRASLVSKAAAESAEAQTIRSVQQTLASTNLSSSLILNSSLSQHATVSASPPALQQPLSRAIAPKPLTMRLPMNQIVASVTIAPNMPTNIAAPLISSMGTNMVAAPSSSQVSPSMQSQQHQMQQLQQQQMQQMQQQQLHQHQMHQQIQQQMQQQHFQHHMQQHLQQQQQHLQQQINQQQMQQQLQHIQLQQMQQQQMQHMQHQSQPSPQQHSPGAPQITSPIPAIGSPQPAPQQHQSQIQSQTQTQVLSQVSIF
SIO_010081: TOX3
subclass of: SO_0000673
so part of: TOX3
location: complement(join(1123696..1124436,1126149..1126229,1127522..1127749,1129053..1129322,1143643..1143894,1147808..1147873,1196074..1196175))
location: region:1123696-1196175:-1
so has part: feature:1196074-1196175:-1:exon
so has part: feature:1147808-1147873:-1:exon
so has part: feature:1143643-1143894:-1:exon
so has part: feature:1129053-1129322:-1:exon
so has part: feature:1127522-1127749:-1:exon
so has part: feature:1126149-1126229:-1:exon
so has part: feature:1123696-1124436:-1:exon

XP_032606433.1
type: Protein
SIO_000068: ncbiprotein

position:1123696:-1
position: 1123696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1196175:-1
position: 1196175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1196074-1196175:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1147808-1147873:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1143643-1143894:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1129053-1129322:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1127522-1127749:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1126149-1126229:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1123696-1124436:-1:exon

TOX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: TOX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TOX high mobility group box family member 3 isoform X1
translation: MDVRFYPAAAGSALPGDPSNLDFAQCLGYYNYNKFGNNNNYMNMAEANNAFLAANEQTFHTPSLGDEEFEIPPITPPPESDPSLGMADILLPFQGLGDQLPAQGNEFTPQFPPQSLDLPSITISRNLVEQDGVIHSNGLHMDQSHTQVSQYRQDHSLIMRSIVHMTDAAHSGIMPPSQLTTINQSQLSAQLGLNLGGTNLPHTSPSPPASKSATPSPSSSINEEDADESNRATGEKRAAPDSGKKPKTPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGDVSKIVASMWDSLGEEQKQVYKRKTEAAKKEYLKALAAYRASLVSKAAAESAEAQTIRSVQQTLASTNLSSSLILNSSLSQHATVSASPPALQQPLSRAIAPKPLTMRLPMNQIVASVTIAPNMPTNIAAPLISSMGTNMVAAPSSSQVSPSMQSQQHQMQQLQQQQMQQMQQQQLHQHQMHQQIQQQMQQQHFQHHMQQHLQQQQQHLQQQINQQQMQQQLQHIQLQQMQQQQMQHMQHQSQPSPQQHSPGAPQITSPIPAIGSPQPAPQQHQSQIQSQTQTQVLSQVSIF
SIO_010081: TOX3
subclass of: SO_0000673
so part of: TOX3
location: complement(join(1123696..1124436,1126149..1126229,1127522..1127749,1129053..1129322,1143643..1143897,1147808..1147873,1196074..1196175))
location: region:1123696-1196175:-1
so has part: feature:1196074-1196175:-1:exon
so has part: feature:1147808-1147873:-1:exon
so has part: feature:1143643-1143897:-1:exon
so has part: feature:1129053-1129322:-1:exon
so has part: feature:1127522-1127749:-1:exon
so has part: feature:1126149-1126229:-1:exon
so has part: feature:1123696-1124436:-1:exon

XP_032606432.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1196074-1196175:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1147808-1147873:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1143643-1143897:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1129053-1129322:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1127522-1127749:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1126149-1126229:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1123696-1124436:-1:exon

LOC115496753
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC115496753
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1209440..1221794)
location: region:1209440-1221794:-1
so has part: feature:1209440-1221794:-1:exon
subclass of: SO_0000011

115496753
type: Gene
SIO_000068: ncbigene

position:1209440:-1
position: 1209440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1221794:-1
position: 1221794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1209440-1221794:-1:exon

LOC115496753
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC115496753
product: uncharacterized LOC115496753
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_003962272.3
SIO_010081: LOC115496753
subclass of: SO_0000673
so part of: LOC115496753
location: complement(join(1209440..1209764,1218778..1219067,1221672..1221794))
location: region:1209440-1221794:-1
so has part: feature:1221672-1221794:-1:exon
so has part: feature:1218778-1219067:-1:exon
so has part: feature:1209440-1209764:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1221672-1221794:-1:exon

position:1221672:-1
position: 1221672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1218778-1219067:-1:exon

position:1218778:-1
position: 1218778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1219067:-1
position: 1219067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1209440-1209764:-1:exon

position:1209764:-1
position: 1209764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CHD9
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: CHD9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1368565..1454941
location: region:1368565-1454941:1
so has part: feature:1368565-1454941:1:exon
subclass of: SO_0000010

100222800
type: Gene
SIO_000068: ncbigene

position:1368565:1
position: 1368565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1454941:1
position: 1454941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1368565-1454941:1:exon

CHD9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: CHD9
product: chromodomain helicase DNA binding protein 9, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 31 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_030282527.3
SIO_010081: CHD9
subclass of: SO_0000673
so part of: CHD9
location: join(1368565..1368736,1376461..1376542,1378261..1378349,1383436..1385038,1403400..1403734,1412833..1412944,1416103..1416252,1417384..1417452,1417541..1417596,1418953..1419070,1419587..1419673,1420975..1421112,1423224..1423345,1424556..1424799,1425633..1425809,1426623..1426766,1426870..1427125,1427931..1428141,1430142..1430337,1431091..1431258,1431827..1432006,1433289..1433399,1434088..1434284,1435063..1435262,1435720..1435879,1436820..1436909,1437698..1437801,1437921..1438038,1438705..1438762,1439137..1439179,1439338..1439557,1439678..1439880,1440111..1441019,1443161..1443324,1444274..1444546,1445272..1445440,1446370..1446509,1446989..1447210,1447981..1448109,1450078..1450182,1451497..1454941)
location: region:1368565-1454941:1
so has part: feature:1368565-1368736:1:exon
so has part: feature:1376461-1376542:1:exon
so has part: feature:1378261-1378349:1:exon
so has part: feature:1383436-1385038:1:exon
so has part: feature:1403400-1403734:1:exon
so has part: feature:1412833-1412944:1:exon
so has part: feature:1416103-1416252:1:exon
so has part: feature:1417384-1417452:1:exon
so has part: feature:1417541-1417596:1:exon
so has part: feature:1418953-1419070:1:exon
so has part: feature:1419587-1419673:1:exon
so has part: feature:1420975-1421112:1:exon
so has part: feature:1423224-1423345:1:exon
so has part: feature:1424556-1424799:1:exon
so has part: feature:1425633-1425809:1:exon
so has part: feature:1426623-1426766:1:exon
so has part: feature:1426870-1427125:1:exon
so has part: feature:1427931-1428141:1:exon
so has part: feature:1430142-1430337:1:exon
so has part: feature:1431091-1431258:1:exon
so has part: feature:1431827-1432006:1:exon
so has part: feature:1433289-1433399:1:exon
so has part: feature:1434088-1434284:1:exon
so has part: feature:1435063-1435262:1:exon
so has part: feature:1435720-1435879:1:exon
so has part: feature:1436820-1436909:1:exon
so has part: feature:1437698-1437801:1:exon
so has part: feature:1437921-1438038:1:exon
so has part: feature:1438705-1438762:1:exon
so has part: feature:1439137-1439179:1:exon
so has part: feature:1439338-1439557:1:exon
so has part: feature:1439678-1439880:1:exon
so has part: feature:1440111-1441019:1:exon
so has part: feature:1443161-1443324:1:exon
so has part: feature:1444274-1444546:1:exon
so has part: feature:1445272-1445440:1:exon
so has part: feature:1446370-1446509:1:exon
so has part: feature:1446989-1447210:1:exon
so has part: feature:1447981-1448109:1:exon
so has part: feature:1450078-1450182:1:exon
so has part: feature:1451497-1454941:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1368565-1368736:1:exon

position:1368736:1
position: 1368736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1376461-1376542:1:exon

position:1376461:1
position: 1376461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1376542:1
position: 1376542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1378261-1378349:1:exon

position:1378261:1
position: 1378261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1378349:1
position: 1378349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1383436-1385038:1:exon

position:1383436:1
position: 1383436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1385038:1
position: 1385038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1403400-1403734:1:exon

position:1403400:1
position: 1403400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1403734:1
position: 1403734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1412833-1412944:1:exon

position:1412833:1
position: 1412833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1412944:1
position: 1412944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1416103-1416252:1:exon

position:1416103:1
position: 1416103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1416252:1
position: 1416252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1417384-1417452:1:exon

position:1417384:1
position: 1417384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1417452:1
position: 1417452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1417541-1417596:1:exon

position:1417541:1
position: 1417541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1417596:1
position: 1417596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1418953-1419070:1:exon

position:1418953:1
position: 1418953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1419070:1
position: 1419070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1419587-1419673:1:exon

position:1419587:1
position: 1419587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1419673:1
position: 1419673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1420975-1421112:1:exon

position:1420975:1
position: 1420975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1421112:1
position: 1421112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1423224-1423345:1:exon

position:1423224:1
position: 1423224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1423345:1
position: 1423345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1424556-1424799:1:exon

position:1424556:1
position: 1424556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1424799:1
position: 1424799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1425633-1425809:1:exon

position:1425633:1
position: 1425633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1425809:1
position: 1425809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1426623-1426766:1:exon

position:1426623:1
position: 1426623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1426766:1
position: 1426766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1426870-1427125:1:exon

position:1426870:1
position: 1426870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1427125:1
position: 1427125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1427931-1428141:1:exon

position:1427931:1
position: 1427931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1428141:1
position: 1428141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1430142-1430337:1:exon

position:1430142:1
position: 1430142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1430337:1
position: 1430337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1431091-1431258:1:exon

position:1431091:1
position: 1431091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1431258:1
position: 1431258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1431827-1432006:1:exon

position:1431827:1
position: 1431827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1432006:1
position: 1432006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1433289-1433399:1:exon

position:1433289:1
position: 1433289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1433399:1
position: 1433399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1434088-1434284:1:exon

position:1434088:1
position: 1434088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1434284:1
position: 1434284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1435063-1435262:1:exon

position:1435063:1
position: 1435063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1435262:1
position: 1435262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1435720-1435879:1:exon

position:1435720:1
position: 1435720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1435879:1
position: 1435879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1436820-1436909:1:exon

position:1436820:1
position: 1436820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1436909:1
position: 1436909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1437698-1437801:1:exon

position:1437698:1
position: 1437698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1437801:1
position: 1437801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:1437921-1438038:1:exon

position:1437921:1
position: 1437921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1438038:1
position: 1438038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:1438705-1438762:1:exon

position:1438705:1
position: 1438705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1438762:1
position: 1438762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:1439137-1439179:1:exon

position:1439137:1
position: 1439137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1439179:1
position: 1439179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:1439338-1439557:1:exon

position:1439338:1
position: 1439338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1439557:1
position: 1439557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:1439678-1439880:1:exon

position:1439678:1
position: 1439678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1439880:1
position: 1439880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:1440111-1441019:1:exon

position:1440111:1
position: 1440111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1441019:1
position: 1441019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:1443161-1443324:1:exon

position:1443161:1
position: 1443161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1443324:1
position: 1443324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:1444274-1444546:1:exon

position:1444274:1
position: 1444274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1444546:1
position: 1444546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:1445272-1445440:1:exon

position:1445272:1
position: 1445272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1445440:1
position: 1445440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:1446370-1446509:1:exon

position:1446370:1
position: 1446370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1446509:1
position: 1446509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:1446989-1447210:1:exon

position:1446989:1
position: 1446989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1447210:1
position: 1447210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:1447981-1448109:1:exon

position:1447981:1
position: 1447981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1448109:1
position: 1448109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:1450078-1450182:1:exon

position:1450078:1
position: 1450078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1450182:1
position: 1450182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:1451497-1454941:1:exon

position:1451497:1
position: 1451497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CHD9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: CHD9
product: chromodomain helicase DNA binding protein 9, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 31 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_030282530.3
SIO_010081: CHD9
subclass of: SO_0000673
so part of: CHD9
location: join(1368565..1368736,1376466..1376542,1378261..1378349,1383436..1385038,1403400..1403734,1412833..1412944,1416103..1416252,1417384..1417452,1417541..1417596,1418953..1419070,1419587..1419673,1420975..1421112,1423224..1423345,1424556..1424799,1425633..1425809,1426623..1426766,1426870..1427125,1427931..1428141,1430142..1430337,1431091..1431258,1431827..1432006,1433289..1433399,1434088..1434284,1435063..1435262,1435720..1435879,1436820..1436909,1437698..1437801,1437921..1438038,1438705..1438762,1439137..1439179,1439338..1439557,1439678..1439880,1440111..1441019,1443161..1443324,1444274..1444546,1445272..1445440,1446370..1446509,1446989..1447210,1447981..1448109,1450078..1450182,1451497..1454941)
location: region:1368565-1454941:1
so has part: feature:1368565-1368736:1:exon
so has part: feature:1376466-1376542:1:exon
so has part: feature:1378261-1378349:1:exon
so has part: feature:1383436-1385038:1:exon
so has part: feature:1403400-1403734:1:exon
so has part: feature:1412833-1412944:1:exon
so has part: feature:1416103-1416252:1:exon
so has part: feature:1417384-1417452:1:exon
so has part: feature:1417541-1417596:1:exon
so has part: feature:1418953-1419070:1:exon
so has part: feature:1419587-1419673:1:exon
so has part: feature:1420975-1421112:1:exon
so has part: feature:1423224-1423345:1:exon
so has part: feature:1424556-1424799:1:exon
so has part: feature:1425633-1425809:1:exon
so has part: feature:1426623-1426766:1:exon
so has part: feature:1426870-1427125:1:exon
so has part: feature:1427931-1428141:1:exon
so has part: feature:1430142-1430337:1:exon
so has part: feature:1431091-1431258:1:exon
so has part: feature:1431827-1432006:1:exon
so has part: feature:1433289-1433399:1:exon
so has part: feature:1434088-1434284:1:exon
so has part: feature:1435063-1435262:1:exon
so has part: feature:1435720-1435879:1:exon
so has part: feature:1436820-1436909:1:exon
so has part: feature:1437698-1437801:1:exon
so has part: feature:1437921-1438038:1:exon
so has part: feature:1438705-1438762:1:exon
so has part: feature:1439137-1439179:1:exon
so has part: feature:1439338-1439557:1:exon
so has part: feature:1439678-1439880:1:exon
so has part: feature:1440111-1441019:1:exon
so has part: feature:1443161-1443324:1:exon
so has part: feature:1444274-1444546:1:exon
so has part: feature:1445272-1445440:1:exon
so has part: feature:1446370-1446509:1:exon
so has part: feature:1446989-1447210:1:exon
so has part: feature:1447981-1448109:1:exon
so has part: feature:1450078-1450182:1:exon
so has part: feature:1451497-1454941:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1368565-1368736:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1376466-1376542:1:exon

position:1376466:1
position: 1376466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1378261-1378349:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1383436-1385038:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1403400-1403734:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1412833-1412944:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1416103-1416252:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1417384-1417452:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1417541-1417596:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1418953-1419070:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1419587-1419673:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1420975-1421112:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1423224-1423345:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1424556-1424799:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1425633-1425809:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1426623-1426766:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1426870-1427125:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1427931-1428141:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1430142-1430337:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1431091-1431258:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1431827-1432006:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1433289-1433399:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1434088-1434284:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1435063-1435262:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1435720-1435879:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1436820-1436909:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1437698-1437801:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1437921-1438038:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1438705-1438762:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1439137-1439179:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1439338-1439557:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1439678-1439880:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1440111-1441019:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1443161-1443324:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1444274-1444546:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1445272-1445440:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1446370-1446509:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1446989-1447210:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1447981-1448109:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1450078-1450182:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:1451497-1454941:1:exon

LOC116808846
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC116808846
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1375083..1401578)
location: region:1375083-1401578:-1
so has part: feature:1375083-1401578:-1:exon
subclass of: SO_0000011

116808846
type: Gene
SIO_000068: ncbigene

position:1375083:-1
position: 1375083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1401578:-1
position: 1401578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1375083-1401578:-1:exon

LOC116808846
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC116808846
product: uncharacterized LOC116808846
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XR_004369037.2
SIO_010081: LOC116808846
subclass of: SO_0000673
so part of: LOC116808846
location: complement(join(1375083..1376088,1384761..1385002,1401471..1401578))
location: region:1375083-1401578:-1
so has part: feature:1401471-1401578:-1:exon
so has part: feature:1384761-1385002:-1:exon
so has part: feature:1375083-1376088:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1401471-1401578:-1:exon

position:1401471:-1
position: 1401471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1384761-1385002:-1:exon

position:1384761:-1
position: 1384761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1385002:-1
position: 1385002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1375083-1376088:-1:exon

position:1376088:-1
position: 1376088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CHD9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: CHD9
product: chromodomain helicase DNA binding protein 9, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 30 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_041718610.1
SIO_010081: CHD9
subclass of: SO_0000673
so part of: CHD9
location: join(1376088..1376542,1378261..1378349,1383436..1385038,1403400..1403734,1412833..1412944,1416103..1416252,1417384..1417452,1417541..1417596,1418953..1419070,1419587..1419673,1420975..1421112,1423224..1423345,1424556..1424799,1425633..1425809,1426623..1426766,1426870..1427125,1427931..1428141,1430142..1430337,1431091..1431258,1431827..1432006,1433289..1433399,1434088..1434284,1435063..1435262,1435720..1435879,1436820..1436909,1437698..1437801,1437921..1438038,1438705..1438762,1439137..1439179,1439338..1439557,1439678..1439880,1440111..1441019,1443161..1443324,1444274..1444546,1445299..1445440,1446370..1446509,1446989..1447210,1447981..1448109,1450078..1450182,1451497..1454941)
location: region:1376088-1454941:1
so has part: feature:1376088-1376542:1:exon
so has part: feature:1378261-1378349:1:exon
so has part: feature:1383436-1385038:1:exon
so has part: feature:1403400-1403734:1:exon
so has part: feature:1412833-1412944:1:exon
so has part: feature:1416103-1416252:1:exon
so has part: feature:1417384-1417452:1:exon
so has part: feature:1417541-1417596:1:exon
so has part: feature:1418953-1419070:1:exon
so has part: feature:1419587-1419673:1:exon
so has part: feature:1420975-1421112:1:exon
so has part: feature:1423224-1423345:1:exon
so has part: feature:1424556-1424799:1:exon
so has part: feature:1425633-1425809:1:exon
so has part: feature:1426623-1426766:1:exon
so has part: feature:1426870-1427125:1:exon
so has part: feature:1427931-1428141:1:exon
so has part: feature:1430142-1430337:1:exon
so has part: feature:1431091-1431258:1:exon
so has part: feature:1431827-1432006:1:exon
so has part: feature:1433289-1433399:1:exon
so has part: feature:1434088-1434284:1:exon
so has part: feature:1435063-1435262:1:exon
so has part: feature:1435720-1435879:1:exon
so has part: feature:1436820-1436909:1:exon
so has part: feature:1437698-1437801:1:exon
so has part: feature:1437921-1438038:1:exon
so has part: feature:1438705-1438762:1:exon
so has part: feature:1439137-1439179:1:exon
so has part: feature:1439338-1439557:1:exon
so has part: feature:1439678-1439880:1:exon
so has part: feature:1440111-1441019:1:exon
so has part: feature:1443161-1443324:1:exon
so has part: feature:1444274-1444546:1:exon
so has part: feature:1445299-1445440:1:exon
so has part: feature:1446370-1446509:1:exon
so has part: feature:1446989-1447210:1:exon
so has part: feature:1447981-1448109:1:exon
so has part: feature:1450078-1450182:1:exon
so has part: feature:1451497-1454941:1:exon

position:1376088:1
position: 1376088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1376088-1376542:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1378261-1378349:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1383436-1385038:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1403400-1403734:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1412833-1412944:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1416103-1416252:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1417384-1417452:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1417541-1417596:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1418953-1419070:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1419587-1419673:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1420975-1421112:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1423224-1423345:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1424556-1424799:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1425633-1425809:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1426623-1426766:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1426870-1427125:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1427931-1428141:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1430142-1430337:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1431091-1431258:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1431827-1432006:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1433289-1433399:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1434088-1434284:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1435063-1435262:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1435720-1435879:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1436820-1436909:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1437698-1437801:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1437921-1438038:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1438705-1438762:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1439137-1439179:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1439338-1439557:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1439678-1439880:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1440111-1441019:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1443161-1443324:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1444274-1444546:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1445299-1445440:1:exon

position:1445299:1
position: 1445299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:1446370-1446509:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1446989-1447210:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1447981-1448109:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1450078-1450182:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1451497-1454941:1:exon

CHD9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: CHD9
product: chromodomain helicase DNA binding protein 9, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 31 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_041718608.1
SIO_010081: CHD9
subclass of: SO_0000673
so part of: CHD9
location: join(1376088..1376542,1378261..1378349,1383436..1385038,1403400..1403734,1412833..1412944,1416103..1416252,1417384..1417452,1417541..1417596,1418953..1419070,1419587..1419673,1420975..1421112,1423224..1423345,1424556..1424799,1425633..1425809,1426623..1426766,1426870..1427125,1427931..1428141,1430142..1430337,1431091..1431258,1431827..1432006,1433289..1433399,1434088..1434284,1435063..1435262,1435720..1435879,1436820..1436909,1437698..1437801,1437921..1438038,1438705..1438762,1439137..1439179,1439338..1439557,1439678..1439880,1440111..1441019,1443164..1443324,1444274..1444546,1445272..1445440,1446370..1446509,1446989..1447210,1447981..1448109,1450078..1450182,1451497..1454941)
location: region:1376088-1454941:1
so has part: feature:1376088-1376542:1:exon
so has part: feature:1378261-1378349:1:exon
so has part: feature:1383436-1385038:1:exon
so has part: feature:1403400-1403734:1:exon
so has part: feature:1412833-1412944:1:exon
so has part: feature:1416103-1416252:1:exon
so has part: feature:1417384-1417452:1:exon
so has part: feature:1417541-1417596:1:exon
so has part: feature:1418953-1419070:1:exon
so has part: feature:1419587-1419673:1:exon
so has part: feature:1420975-1421112:1:exon
so has part: feature:1423224-1423345:1:exon
so has part: feature:1424556-1424799:1:exon
so has part: feature:1425633-1425809:1:exon
so has part: feature:1426623-1426766:1:exon
so has part: feature:1426870-1427125:1:exon
so has part: feature:1427931-1428141:1:exon
so has part: feature:1430142-1430337:1:exon
so has part: feature:1431091-1431258:1:exon
so has part: feature:1431827-1432006:1:exon
so has part: feature:1433289-1433399:1:exon
so has part: feature:1434088-1434284:1:exon
so has part: feature:1435063-1435262:1:exon
so has part: feature:1435720-1435879:1:exon
so has part: feature:1436820-1436909:1:exon
so has part: feature:1437698-1437801:1:exon
so has part: feature:1437921-1438038:1:exon
so has part: feature:1438705-1438762:1:exon
so has part: feature:1439137-1439179:1:exon
so has part: feature:1439338-1439557:1:exon
so has part: feature:1439678-1439880:1:exon
so has part: feature:1440111-1441019:1:exon
so has part: feature:1443164-1443324:1:exon
so has part: feature:1444274-1444546:1:exon
so has part: feature:1445272-1445440:1:exon
so has part: feature:1446370-1446509:1:exon
so has part: feature:1446989-1447210:1:exon
so has part: feature:1447981-1448109:1:exon
so has part: feature:1450078-1450182:1:exon
so has part: feature:1451497-1454941:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1376088-1376542:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1378261-1378349:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1383436-1385038:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1403400-1403734:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1412833-1412944:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1416103-1416252:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1417384-1417452:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1417541-1417596:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1418953-1419070:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1419587-1419673:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1420975-1421112:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1423224-1423345:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1424556-1424799:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1425633-1425809:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1426623-1426766:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1426870-1427125:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1427931-1428141:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1430142-1430337:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1431091-1431258:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1431827-1432006:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1433289-1433399:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1434088-1434284:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1435063-1435262:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1435720-1435879:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1436820-1436909:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1437698-1437801:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1437921-1438038:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1438705-1438762:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1439137-1439179:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1439338-1439557:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1439678-1439880:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1440111-1441019:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1443164-1443324:1:exon

position:1443164:1
position: 1443164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:1444274-1444546:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1445272-1445440:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1446370-1446509:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1446989-1447210:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1447981-1448109:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1450078-1450182:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1451497-1454941:1:exon

CHD9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: CHD9
product: chromodomain helicase DNA binding protein 9, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 31 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_041718609.1
SIO_010081: CHD9
subclass of: SO_0000673
so part of: CHD9
location: join(1376088..1376542,1378261..1378349,1383436..1385038,1403400..1403734,1412833..1412944,1416106..1416252,1417384..1417452,1417541..1417596,1418953..1419070,1419587..1419673,1420975..1421112,1423224..1423345,1424556..1424799,1425633..1425809,1426623..1426766,1426870..1427125,1427931..1428141,1430142..1430337,1431091..1431258,1431827..1432006,1433289..1433399,1434088..1434284,1435063..1435262,1435720..1435879,1436820..1436909,1437698..1437801,1437921..1438038,1438705..1438762,1439137..1439179,1439338..1439557,1439678..1439880,1440111..1441019,1443161..1443324,1444274..1444546,1445272..1445440,1446370..1446509,1446989..1447210,1447981..1448109,1450078..1450182,1451497..1454941)
location: region:1376088-1454941:1
so has part: feature:1376088-1376542:1:exon
so has part: feature:1378261-1378349:1:exon
so has part: feature:1383436-1385038:1:exon
so has part: feature:1403400-1403734:1:exon
so has part: feature:1412833-1412944:1:exon
so has part: feature:1416106-1416252:1:exon
so has part: feature:1417384-1417452:1:exon
so has part: feature:1417541-1417596:1:exon
so has part: feature:1418953-1419070:1:exon
so has part: feature:1419587-1419673:1:exon
so has part: feature:1420975-1421112:1:exon
so has part: feature:1423224-1423345:1:exon
so has part: feature:1424556-1424799:1:exon
so has part: feature:1425633-1425809:1:exon
so has part: feature:1426623-1426766:1:exon
so has part: feature:1426870-1427125:1:exon
so has part: feature:1427931-1428141:1:exon
so has part: feature:1430142-1430337:1:exon
so has part: feature:1431091-1431258:1:exon
so has part: feature:1431827-1432006:1:exon
so has part: feature:1433289-1433399:1:exon
so has part: feature:1434088-1434284:1:exon
so has part: feature:1435063-1435262:1:exon
so has part: feature:1435720-1435879:1:exon
so has part: feature:1436820-1436909:1:exon
so has part: feature:1437698-1437801:1:exon
so has part: feature:1437921-1438038:1:exon
so has part: feature:1438705-1438762:1:exon
so has part: feature:1439137-1439179:1:exon
so has part: feature:1439338-1439557:1:exon
so has part: feature:1439678-1439880:1:exon
so has part: feature:1440111-1441019:1:exon
so has part: feature:1443161-1443324:1:exon
so has part: feature:1444274-1444546:1:exon
so has part: feature:1445272-1445440:1:exon
so has part: feature:1446370-1446509:1:exon
so has part: feature:1446989-1447210:1:exon
so has part: feature:1447981-1448109:1:exon
so has part: feature:1450078-1450182:1:exon
so has part: feature:1451497-1454941:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1376088-1376542:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1378261-1378349:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1383436-1385038:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1403400-1403734:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1412833-1412944:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1416106-1416252:1:exon

position:1416106:1
position: 1416106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1417384-1417452:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1417541-1417596:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1418953-1419070:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1419587-1419673:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1420975-1421112:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1423224-1423345:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1424556-1424799:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1425633-1425809:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1426623-1426766:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1426870-1427125:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1427931-1428141:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1430142-1430337:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1431091-1431258:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1431827-1432006:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1433289-1433399:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1434088-1434284:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1435063-1435262:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1435720-1435879:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1436820-1436909:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1437698-1437801:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1437921-1438038:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1438705-1438762:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1439137-1439179:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1439338-1439557:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1439678-1439880:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1440111-1441019:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1443161-1443324:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1444274-1444546:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1445272-1445440:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1446370-1446509:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1446989-1447210:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1447981-1448109:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1450078-1450182:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1451497-1454941:1:exon

CHD9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: CHD9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromodomain-helicase-DNA-binding protein 9 isoform X1
translation: MTDPMMDFFDDANLFSETLEGLSDDAFVQPGPVSLVDELNLGAEFEPLHIDSLNHVQDAQNQQKMSEFDQLNQYDSLKLHSVNQSFNSSADNVLSPHSQFNCSPVHPQNQSNGMFPDVADGSPMWGHQTATTVSNQNGSPFHQGHSQSMQQNKSFVAHHDFALFQANEPQHQCASLRPQQSRNNTGQDALSQPKDFMEVNVSTSLRVSVNHPPSVSNPSTSQQPLSVQQFSQTASTSIHFCGNQEGNFDGQSPTITPCSVSSSQQFSSPYSYSNNHISPTSLLQPTTGLSTSQQTHSISDFTGSDAFTSQTGTKQETTEHMLNPNTALNSSTFQMLHSAHPQGNFSSSKLSPVNINFPASTGSASQISHFTDSIESNGFTSLDDNLLHQVETHNEPFTGLDPDDLLQEDLLPQFDDSAFVQDSTSHVLEHDLEHHITPQQVTSSSELVRPPSQTQIHPWHSSVSNQHLQGRSRATLQGQPPSKKTDGSGSYTKLQNTQVRGMSEKKQKKKTDSESKQEKANRIISEAIAKAKERGERNIPRVMSPENFPSVSAEGKEEKKGRKVKSKPKDKETKKPKTGSSSKIKEKTKIGKLIITLGKKQKRKNESSDELSDAKQTPQRPLKDEDSQKRRSNRQVKRKKYSEEGEGKQSEEEAAKVSVKIKKNSAPLPAEQPLQLFVENPSEEDAAIVDKILSSRVIKKEISAGMTVDTEEFFVKYKNYSYLHCEWATEQQLLKDKRIQQKIKRFKVRKAQRAHFFADMEEEPFNPDYVEVDRVLEVSLCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDQAKIEEFEQLQASRPDSRRLDRPPPNSWKKIEQSREYKNGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFLYEILLTGIRGPFLIIAPLSTITNWEREFRTWTDLNVVVYHGSMISRQMIQQYEMYFRDSQGRIVRGTYRFQAIITTFEMILGGCPELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPAESTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFAFLSKGAGQANVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFKETYNPSAPDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLITRNSYEREMFDRASLKLGLDKAVLQSMSGRENSVGGIQQLSKKEIEDLLRRGAYGAIMDEEDEGSKFCEEDIDQILQRRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAEIDIDAISGRNSLVIDTPRIRKQTRPFSATKDELAELSEVESEGEEKPKLRRPCDRSNGYGRTECFRVEKNLLVYGWGRWREILSHGRFKRQLNEQDVEIICRALLAYCLVHYRGDEKIKSFIWDLITPTEDGQTRELQNHLGLSAPVPRGRKGKKVKTQASTFDIHKAEWLRKYNPEHLLQDEGYKKHIKHHCNKVLLRVRMLYYLKQEVIGNEFQKVFDGTDASEIDVWVPEPDHSEVPAEWWDADADKSLLIGVFKHGYEKYNTIRADPALCFLERVGKPDEKAVAAEQRANDYMDGDVEDPEYKPAPALFKDDIEDDVSSPGDLVIADGDGQMMEGDKIYWPTQSALTTRLRRLITAYQRTSKNRQAQQIQPTFPVQTSMMQLQYEEAALNPKMAAKIERQQRWTRREEADFYRVVSTFGVVFDPERGRFDWTKFRAMARLHKKTDDSLEKYLYAFMSMCRRVCRLPSKEELVDPNLFIQPITEERASRTLYRIELLRKVREQALRHPQLFERLKLCQPNPDLPVWWECGTHDRDLLIGAAKHGVSRTDYHILRDPELSFMSAQRNYNQ…
SIO_010081: CHD9
subclass of: SO_0000673
so part of: CHD9
location: join(1383602..1385038,1403400..1403734,1412833..1412944,1416103..1416252,1417384..1417452,1417541..1417596,1418953..1419070,1419587..1419673,1420975..1421112,1423224..1423345,1424556..1424799,1425633..1425809,1426623..1426766,1426870..1427125,1427931..1428141,1430142..1430337,1431091..1431258,1431827..1432006,1433289..1433399,1434088..1434284,1435063..1435262,1435720..1435879,1436820..1436909,1437698..1437801,1437921..1438038,1438705..1438762,1439137..1439179,1439338..1439557,1439678..1439880,1440111..1441019,1443161..1443324,1444274..1444546,1445272..1445440,1446370..1446509,1446989..1447210,1447981..1448109,1450078..1450182,1451497..1452354)
location: region:1383602-1452354:1
so has part: feature:1383602-1385038:1:exon
so has part: feature:1403400-1403734:1:exon
so has part: feature:1412833-1412944:1:exon
so has part: feature:1416103-1416252:1:exon
so has part: feature:1417384-1417452:1:exon
so has part: feature:1417541-1417596:1:exon
so has part: feature:1418953-1419070:1:exon
so has part: feature:1419587-1419673:1:exon
so has part: feature:1420975-1421112:1:exon
so has part: feature:1423224-1423345:1:exon
so has part: feature:1424556-1424799:1:exon
so has part: feature:1425633-1425809:1:exon
so has part: feature:1426623-1426766:1:exon
so has part: feature:1426870-1427125:1:exon
so has part: feature:1427931-1428141:1:exon
so has part: feature:1430142-1430337:1:exon
so has part: feature:1431091-1431258:1:exon
so has part: feature:1431827-1432006:1:exon
so has part: feature:1433289-1433399:1:exon
so has part: feature:1434088-1434284:1:exon
so has part: feature:1435063-1435262:1:exon
so has part: feature:1435720-1435879:1:exon
so has part: feature:1436820-1436909:1:exon
so has part: feature:1437698-1437801:1:exon
so has part: feature:1437921-1438038:1:exon
so has part: feature:1438705-1438762:1:exon
so has part: feature:1439137-1439179:1:exon
so has part: feature:1439338-1439557:1:exon
so has part: feature:1439678-1439880:1:exon
so has part: feature:1440111-1441019:1:exon
so has part: feature:1443161-1443324:1:exon
so has part: feature:1444274-1444546:1:exon
so has part: feature:1445272-1445440:1:exon
so has part: feature:1446370-1446509:1:exon
so has part: feature:1446989-1447210:1:exon
so has part: feature:1447981-1448109:1:exon
so has part: feature:1450078-1450182:1:exon
so has part: feature:1451497-1452354:1:exon

XP_030138387.3
type: Protein
SIO_000068: ncbiprotein

position:1383602:1
position: 1383602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1452354:1
position: 1452354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1383602-1385038:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1403400-1403734:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1412833-1412944:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1416103-1416252:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1417384-1417452:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1417541-1417596:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1418953-1419070:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1419587-1419673:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1420975-1421112:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1423224-1423345:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1424556-1424799:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1425633-1425809:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1426623-1426766:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1426870-1427125:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1427931-1428141:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1430142-1430337:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1431091-1431258:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1431827-1432006:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1433289-1433399:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1434088-1434284:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1435063-1435262:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1435720-1435879:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1436820-1436909:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1437698-1437801:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1437921-1438038:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1438705-1438762:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1439137-1439179:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1439338-1439557:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1439678-1439880:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1440111-1441019:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1443161-1443324:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1444274-1444546:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1445272-1445440:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1446370-1446509:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1446989-1447210:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1447981-1448109:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1450078-1450182:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1451497-1452354:1:exon

CHD9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: CHD9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromodomain-helicase-DNA-binding protein 9 isoform X1
translation: MTDPMMDFFDDANLFSETLEGLSDDAFVQPGPVSLVDELNLGAEFEPLHIDSLNHVQDAQNQQKMSEFDQLNQYDSLKLHSVNQSFNSSADNVLSPHSQFNCSPVHPQNQSNGMFPDVADGSPMWGHQTATTVSNQNGSPFHQGHSQSMQQNKSFVAHHDFALFQANEPQHQCASLRPQQSRNNTGQDALSQPKDFMEVNVSTSLRVSVNHPPSVSNPSTSQQPLSVQQFSQTASTSIHFCGNQEGNFDGQSPTITPCSVSSSQQFSSPYSYSNNHISPTSLLQPTTGLSTSQQTHSISDFTGSDAFTSQTGTKQETTEHMLNPNTALNSSTFQMLHSAHPQGNFSSSKLSPVNINFPASTGSASQISHFTDSIESNGFTSLDDNLLHQVETHNEPFTGLDPDDLLQEDLLPQFDDSAFVQDSTSHVLEHDLEHHITPQQVTSSSELVRPPSQTQIHPWHSSVSNQHLQGRSRATLQGQPPSKKTDGSGSYTKLQNTQVRGMSEKKQKKKTDSESKQEKANRIISEAIAKAKERGERNIPRVMSPENFPSVSAEGKEEKKGRKVKSKPKDKETKKPKTGSSSKIKEKTKIGKLIITLGKKQKRKNESSDELSDAKQTPQRPLKDEDSQKRRSNRQVKRKKYSEEGEGKQSEEEAAKVSVKIKKNSAPLPAEQPLQLFVENPSEEDAAIVDKILSSRVIKKEISAGMTVDTEEFFVKYKNYSYLHCEWATEQQLLKDKRIQQKIKRFKVRKAQRAHFFADMEEEPFNPDYVEVDRVLEVSLCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDQAKIEEFEQLQASRPDSRRLDRPPPNSWKKIEQSREYKNGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFLYEILLTGIRGPFLIIAPLSTITNWEREFRTWTDLNVVVYHGSMISRQMIQQYEMYFRDSQGRIVRGTYRFQAIITTFEMILGGCPELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPAESTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFAFLSKGAGQANVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFKETYNPSAPDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLITRNSYEREMFDRASLKLGLDKAVLQSMSGRENSVGGIQQLSKKEIEDLLRRGAYGAIMDEEDEGSKFCEEDIDQILQRRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAEIDIDAISGRNSLVIDTPRIRKQTRPFSATKDELAELSEVESEGEEKPKLRRPCDRSNGYGRTECFRVEKNLLVYGWGRWREILSHGRFKRQLNEQDVEIICRALLAYCLVHYRGDEKIKSFIWDLITPTEDGQTRELQNHLGLSAPVPRGRKGKKVKTQASTFDIHKAEWLRKYNPEHLLQDEGYKKHIKHHCNKVLLRVRMLYYLKQEVIGNEFQKVFDGTDASEIDVWVPEPDHSEVPAEWWDADADKSLLIGVFKHGYEKYNTIRADPALCFLERVGKPDEKAVAAEQRANDYMDGDVEDPEYKPAPALFKDDIEDDVSSPGDLVIADGDGQMMEGDKIYWPTQSALTTRLRRLITAYQRTSKNRQAQQIQPTFPVQTSMMQLQYEEAALNPKMAAKIERQQRWTRREEADFYRVVSTFGVVFDPERGRFDWTKFRAMARLHKKTDDSLEKYLYAFMSMCRRVCRLPSKEELVDPNLFIQPITEERASRTLYRIELLRKVREQALRHPQLFERLKLCQPNPDLPVWWECGTHDRDLLIGAAKHGVSRTDYHILRDPELSFMSAQRNYNQ…
SIO_010081: CHD9
subclass of: SO_0000673
so part of: CHD9
location: join(1383602..1385038,1403400..1403734,1412833..1412944,1416103..1416252,1417384..1417452,1417541..1417596,1418953..1419070,1419587..1419673,1420975..1421112,1423224..1423345,1424556..1424799,1425633..1425809,1426623..1426766,1426870..1427125,1427931..1428141,1430142..1430337,1431091..1431258,1431827..1432006,1433289..1433399,1434088..1434284,1435063..1435262,1435720..1435879,1436820..1436909,1437698..1437801,1437921..1438038,1438705..1438762,1439137..1439179,1439338..1439557,1439678..1439880,1440111..1441019,1443161..1443324,1444274..1444546,1445272..1445440,1446370..1446509,1446989..1447210,1447981..1448109,1450078..1450182,1451497..1452354)
location: region:1383602-1452354:1
so has part: feature:1383602-1385038:1:exon
so has part: feature:1403400-1403734:1:exon
so has part: feature:1412833-1412944:1:exon
so has part: feature:1416103-1416252:1:exon
so has part: feature:1417384-1417452:1:exon
so has part: feature:1417541-1417596:1:exon
so has part: feature:1418953-1419070:1:exon
so has part: feature:1419587-1419673:1:exon
so has part: feature:1420975-1421112:1:exon
so has part: feature:1423224-1423345:1:exon
so has part: feature:1424556-1424799:1:exon
so has part: feature:1425633-1425809:1:exon
so has part: feature:1426623-1426766:1:exon
so has part: feature:1426870-1427125:1:exon
so has part: feature:1427931-1428141:1:exon
so has part: feature:1430142-1430337:1:exon
so has part: feature:1431091-1431258:1:exon
so has part: feature:1431827-1432006:1:exon
so has part: feature:1433289-1433399:1:exon
so has part: feature:1434088-1434284:1:exon
so has part: feature:1435063-1435262:1:exon
so has part: feature:1435720-1435879:1:exon
so has part: feature:1436820-1436909:1:exon
so has part: feature:1437698-1437801:1:exon
so has part: feature:1437921-1438038:1:exon
so has part: feature:1438705-1438762:1:exon
so has part: feature:1439137-1439179:1:exon
so has part: feature:1439338-1439557:1:exon
so has part: feature:1439678-1439880:1:exon
so has part: feature:1440111-1441019:1:exon
so has part: feature:1443161-1443324:1:exon
so has part: feature:1444274-1444546:1:exon
so has part: feature:1445272-1445440:1:exon
so has part: feature:1446370-1446509:1:exon
so has part: feature:1446989-1447210:1:exon
so has part: feature:1447981-1448109:1:exon
so has part: feature:1450078-1450182:1:exon
so has part: feature:1451497-1452354:1:exon

XP_030138390.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1383602-1385038:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1403400-1403734:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1412833-1412944:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1416103-1416252:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1417384-1417452:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1417541-1417596:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1418953-1419070:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1419587-1419673:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1420975-1421112:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1423224-1423345:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1424556-1424799:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1425633-1425809:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1426623-1426766:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1426870-1427125:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1427931-1428141:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1430142-1430337:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1431091-1431258:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1431827-1432006:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1433289-1433399:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1434088-1434284:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1435063-1435262:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1435720-1435879:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1436820-1436909:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1437698-1437801:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1437921-1438038:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1438705-1438762:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1439137-1439179:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1439338-1439557:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1439678-1439880:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1440111-1441019:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1443161-1443324:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1444274-1444546:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1445272-1445440:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1446370-1446509:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1446989-1447210:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1447981-1448109:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1450078-1450182:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1451497-1452354:1:exon

CHD9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: CHD9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromodomain-helicase-DNA-binding protein 9 isoform X4
translation: MTDPMMDFFDDANLFSETLEGLSDDAFVQPGPVSLVDELNLGAEFEPLHIDSLNHVQDAQNQQKMSEFDQLNQYDSLKLHSVNQSFNSSADNVLSPHSQFNCSPVHPQNQSNGMFPDVADGSPMWGHQTATTVSNQNGSPFHQGHSQSMQQNKSFVAHHDFALFQANEPQHQCASLRPQQSRNNTGQDALSQPKDFMEVNVSTSLRVSVNHPPSVSNPSTSQQPLSVQQFSQTASTSIHFCGNQEGNFDGQSPTITPCSVSSSQQFSSPYSYSNNHISPTSLLQPTTGLSTSQQTHSISDFTGSDAFTSQTGTKQETTEHMLNPNTALNSSTFQMLHSAHPQGNFSSSKLSPVNINFPASTGSASQISHFTDSIESNGFTSLDDNLLHQVETHNEPFTGLDPDDLLQEDLLPQFDDSAFVQDSTSHVLEHDLEHHITPQQVTSSSELVRPPSQTQIHPWHSSVSNQHLQGRSRATLQGQPPSKKTDGSGSYTKLQNTQVRGMSEKKQKKKTDSESKQEKANRIISEAIAKAKERGERNIPRVMSPENFPSVSAEGKEEKKGRKVKSKPKDKETKKPKTGSSSKIKEKTKIGKLIITLGKKQKRKNESSDELSDAKQTPQRPLKDEDSQKRRSNRQVKRKKYSEEGEGKQSEEEAAKVSVKIKKNSAPLPAEQPLQLFVENPSEEDAAIVDKILSSRVIKKEISAGMTVDTEEFFVKYKNYSYLHCEWATEQQLLKDKRIQQKIKRFKVRKAQRAHFFADMEEEPFNPDYVEVDRVLEVSLCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDQAKIEEFEQLQASRPDSRRLDRPPPNSWKKIEQSREYKNGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFLYEILLTGIRGPFLIIAPLSTITNWEREFRTWTDLNVVVYHGSMISRQMIQQYEMYFRDSQGRIVRGTYRFQAIITTFEMILGGCPELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPAESTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFAFLSKGAGQANVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFKETYNPSAPDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLITRNSYEREMFDRASLKLGLDKAVLQSMSGRENSVGGIQQLSKKEIEDLLRRGAYGAIMDEEDEGSKFCEEDIDQILQRRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAEIDIDAISGRNSLVIDTPRIRKQTRPFSATKDELAELSEVESEGEEKPKLRRPCDRSNGYGRTECFRVEKNLLVYGWGRWREILSHGRFKRQLNEQDVEIICRALLAYCLVHYRGDEKIKSFIWDLITPTEDGQTRELQNHLGLSAPVPRGRKGKKVKTQASTFDIHKAEWLRKYNPEHLLQDEGYKKHIKHHCNKVLLRVRMLYYLKQEVIGNEFQKVFDGTDASEIDVWVPEPDHSEVPAEWWDADADKSLLIGVFKHGYEKYNTIRADPALCFLERVGKPDEKAVAAEQRANDYMDGDVEDPEYKPAPALFKDDIEDDVSSPGDLVIADGDGQMMEGDKIYWPTQSALTTRLRRLITAYQRTSKNRQAQQIQPTFPVQTSMMQLQYEEAALNPKMAAKIERQQRWTRREEADFYRVVSTFGVVFDPERGRFDWTKFRAMARLHKKTDDSLEKYLYAFMSMCRRVCRLPSKEELVDPNLFIQPITEERASRTLYRIELLRKVREQALRHPQLFERLKLCQPNPDLPVWWECGTHDRDLLIGAAKHGVSRTDYHILRDPELSFMSAQRNYNQ…
SIO_010081: CHD9
subclass of: SO_0000673
so part of: CHD9
location: join(1383602..1385038,1403400..1403734,1412833..1412944,1416103..1416252,1417384..1417452,1417541..1417596,1418953..1419070,1419587..1419673,1420975..1421112,1423224..1423345,1424556..1424799,1425633..1425809,1426623..1426766,1426870..1427125,1427931..1428141,1430142..1430337,1431091..1431258,1431827..1432006,1433289..1433399,1434088..1434284,1435063..1435262,1435720..1435879,1436820..1436909,1437698..1437801,1437921..1438038,1438705..1438762,1439137..1439179,1439338..1439557,1439678..1439880,1440111..1441019,1443161..1443324,1444274..1444546,1445299..1445440,1446370..1446509,1446989..1447210,1447981..1448109,1450078..1450182,1451497..1452354)
location: region:1383602-1452354:1
so has part: feature:1383602-1385038:1:exon
so has part: feature:1403400-1403734:1:exon
so has part: feature:1412833-1412944:1:exon
so has part: feature:1416103-1416252:1:exon
so has part: feature:1417384-1417452:1:exon
so has part: feature:1417541-1417596:1:exon
so has part: feature:1418953-1419070:1:exon
so has part: feature:1419587-1419673:1:exon
so has part: feature:1420975-1421112:1:exon
so has part: feature:1423224-1423345:1:exon
so has part: feature:1424556-1424799:1:exon
so has part: feature:1425633-1425809:1:exon
so has part: feature:1426623-1426766:1:exon
so has part: feature:1426870-1427125:1:exon
so has part: feature:1427931-1428141:1:exon
so has part: feature:1430142-1430337:1:exon
so has part: feature:1431091-1431258:1:exon
so has part: feature:1431827-1432006:1:exon
so has part: feature:1433289-1433399:1:exon
so has part: feature:1434088-1434284:1:exon
so has part: feature:1435063-1435262:1:exon
so has part: feature:1435720-1435879:1:exon
so has part: feature:1436820-1436909:1:exon
so has part: feature:1437698-1437801:1:exon
so has part: feature:1437921-1438038:1:exon
so has part: feature:1438705-1438762:1:exon
so has part: feature:1439137-1439179:1:exon
so has part: feature:1439338-1439557:1:exon
so has part: feature:1439678-1439880:1:exon
so has part: feature:1440111-1441019:1:exon
so has part: feature:1443161-1443324:1:exon
so has part: feature:1444274-1444546:1:exon
so has part: feature:1445299-1445440:1:exon
so has part: feature:1446370-1446509:1:exon
so has part: feature:1446989-1447210:1:exon
so has part: feature:1447981-1448109:1:exon
so has part: feature:1450078-1450182:1:exon
so has part: feature:1451497-1452354:1:exon

XP_041574544.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1383602-1385038:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1403400-1403734:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1412833-1412944:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1416103-1416252:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1417384-1417452:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1417541-1417596:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1418953-1419070:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1419587-1419673:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1420975-1421112:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1423224-1423345:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1424556-1424799:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1425633-1425809:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1426623-1426766:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1426870-1427125:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1427931-1428141:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1430142-1430337:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1431091-1431258:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1431827-1432006:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1433289-1433399:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1434088-1434284:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1435063-1435262:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1435720-1435879:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1436820-1436909:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1437698-1437801:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1437921-1438038:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1438705-1438762:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1439137-1439179:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1439338-1439557:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1439678-1439880:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1440111-1441019:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1443161-1443324:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1444274-1444546:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1445299-1445440:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1446370-1446509:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1446989-1447210:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1447981-1448109:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1450078-1450182:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1451497-1452354:1:exon

CHD9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: CHD9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromodomain-helicase-DNA-binding protein 9 isoform X2
translation: MTDPMMDFFDDANLFSETLEGLSDDAFVQPGPVSLVDELNLGAEFEPLHIDSLNHVQDAQNQQKMSEFDQLNQYDSLKLHSVNQSFNSSADNVLSPHSQFNCSPVHPQNQSNGMFPDVADGSPMWGHQTATTVSNQNGSPFHQGHSQSMQQNKSFVAHHDFALFQANEPQHQCASLRPQQSRNNTGQDALSQPKDFMEVNVSTSLRVSVNHPPSVSNPSTSQQPLSVQQFSQTASTSIHFCGNQEGNFDGQSPTITPCSVSSSQQFSSPYSYSNNHISPTSLLQPTTGLSTSQQTHSISDFTGSDAFTSQTGTKQETTEHMLNPNTALNSSTFQMLHSAHPQGNFSSSKLSPVNINFPASTGSASQISHFTDSIESNGFTSLDDNLLHQVETHNEPFTGLDPDDLLQEDLLPQFDDSAFVQDSTSHVLEHDLEHHITPQQVTSSSELVRPPSQTQIHPWHSSVSNQHLQGRSRATLQGQPPSKKTDGSGSYTKLQNTQVRGMSEKKQKKKTDSESKQEKANRIISEAIAKAKERGERNIPRVMSPENFPSVSAEGKEEKKGRKVKSKPKDKETKKPKTGSSSKIKEKTKIGKLIITLGKKQKRKNESSDELSDAKQTPQRPLKDEDSQKRRSNRQVKRKKYSEEGEGKQSEEEAAKVSVKIKKNSAPLPAEQPLQLFVENPSEEDAAIVDKILSSRVIKKEISAGMTVDTEEFFVKYKNYSYLHCEWATEQQLLKDKRIQQKIKRFKVRKAQRAHFFADMEEEPFNPDYVEVDRVLEVSLCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDQAKIEEFEQLQASRPDSRRLDRPPPNSWKKIEQSREYKNGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFLYEILLTGIRGPFLIIAPLSTITNWEREFRTWTDLNVVVYHGSMISRQMIQQYEMYFRDSQGRIVRGTYRFQAIITTFEMILGGCPELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPAESTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFAFLSKGAGQANVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFKETYNPSAPDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLITRNSYEREMFDRASLKLGLDKAVLQSMSGRENSVGGIQQLSKKEIEDLLRRGAYGAIMDEEDEGSKFCEEDIDQILQRRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAEIDIDAISGRNSLVIDTPRIRKQTRPFSATKDELAELSEVESEGEEKPKLRRPCDRSNGYGRTECFRVEKNLLVYGWGRWREILSHGRFKRQLNEQDVEIICRALLAYCLVHYRGDEKIKSFIWDLITPTEDGQTRELQNHLGLSAPVPRGRKGKKVKTQASTFDIHKAEWLRKYNPEHLLQDEGYKKHIKHHCNKVLLRVRMLYYLKQEVIGNEFQKVFDGTDASEIDVWVPEPDHSEVPAEWWDADADKSLLIGVFKHGYEKYNTIRADPALCFLERVGKPDEKAVAAEQRANDYMDGDVEDPEYKPAPALFKDDIEDDVSSPGDLVIADGDGQMMEGDKIYWPTQSALTTRLRRLITAYQRTSKNRQAQQIQPTFPVQTSMMQLQYEEAALNPKMAAKIERQQRWTRREEADFYRVVSTFGVVFDPERGRFDWTKFRAMARLHKKTDDSLEKYLYAFMSMCRRVCRLPSKEELVDPNLFIQPITEERASRTLYRIELLRKVREQALRHPQLFERLKLCQPNPDLPVWWECGTHDRDLLIGAAKHGVSRTDYHILRDPELSFMSAQRNYNQ…
SIO_010081: CHD9
subclass of: SO_0000673
so part of: CHD9
location: join(1383602..1385038,1403400..1403734,1412833..1412944,1416103..1416252,1417384..1417452,1417541..1417596,1418953..1419070,1419587..1419673,1420975..1421112,1423224..1423345,1424556..1424799,1425633..1425809,1426623..1426766,1426870..1427125,1427931..1428141,1430142..1430337,1431091..1431258,1431827..1432006,1433289..1433399,1434088..1434284,1435063..1435262,1435720..1435879,1436820..1436909,1437698..1437801,1437921..1438038,1438705..1438762,1439137..1439179,1439338..1439557,1439678..1439880,1440111..1441019,1443164..1443324,1444274..1444546,1445272..1445440,1446370..1446509,1446989..1447210,1447981..1448109,1450078..1450182,1451497..1452354)
location: region:1383602-1452354:1
so has part: feature:1383602-1385038:1:exon
so has part: feature:1403400-1403734:1:exon
so has part: feature:1412833-1412944:1:exon
so has part: feature:1416103-1416252:1:exon
so has part: feature:1417384-1417452:1:exon
so has part: feature:1417541-1417596:1:exon
so has part: feature:1418953-1419070:1:exon
so has part: feature:1419587-1419673:1:exon
so has part: feature:1420975-1421112:1:exon
so has part: feature:1423224-1423345:1:exon
so has part: feature:1424556-1424799:1:exon
so has part: feature:1425633-1425809:1:exon
so has part: feature:1426623-1426766:1:exon
so has part: feature:1426870-1427125:1:exon
so has part: feature:1427931-1428141:1:exon
so has part: feature:1430142-1430337:1:exon
so has part: feature:1431091-1431258:1:exon
so has part: feature:1431827-1432006:1:exon
so has part: feature:1433289-1433399:1:exon
so has part: feature:1434088-1434284:1:exon
so has part: feature:1435063-1435262:1:exon
so has part: feature:1435720-1435879:1:exon
so has part: feature:1436820-1436909:1:exon
so has part: feature:1437698-1437801:1:exon
so has part: feature:1437921-1438038:1:exon
so has part: feature:1438705-1438762:1:exon
so has part: feature:1439137-1439179:1:exon
so has part: feature:1439338-1439557:1:exon
so has part: feature:1439678-1439880:1:exon
so has part: feature:1440111-1441019:1:exon
so has part: feature:1443164-1443324:1:exon
so has part: feature:1444274-1444546:1:exon
so has part: feature:1445272-1445440:1:exon
so has part: feature:1446370-1446509:1:exon
so has part: feature:1446989-1447210:1:exon
so has part: feature:1447981-1448109:1:exon
so has part: feature:1450078-1450182:1:exon
so has part: feature:1451497-1452354:1:exon

XP_041574542.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1383602-1385038:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1403400-1403734:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1412833-1412944:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1416103-1416252:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1417384-1417452:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1417541-1417596:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1418953-1419070:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1419587-1419673:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1420975-1421112:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1423224-1423345:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1424556-1424799:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1425633-1425809:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1426623-1426766:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1426870-1427125:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1427931-1428141:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1430142-1430337:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1431091-1431258:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1431827-1432006:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1433289-1433399:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1434088-1434284:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1435063-1435262:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1435720-1435879:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1436820-1436909:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1437698-1437801:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1437921-1438038:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1438705-1438762:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1439137-1439179:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1439338-1439557:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1439678-1439880:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1440111-1441019:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1443164-1443324:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1444274-1444546:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1445272-1445440:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1446370-1446509:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1446989-1447210:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1447981-1448109:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1450078-1450182:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1451497-1452354:1:exon

CHD9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: CHD9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromodomain-helicase-DNA-binding protein 9 isoform X3
translation: MTDPMMDFFDDANLFSETLEGLSDDAFVQPGPVSLVDELNLGAEFEPLHIDSLNHVQDAQNQQKMSEFDQLNQYDSLKLHSVNQSFNSSADNVLSPHSQFNCSPVHPQNQSNGMFPDVADGSPMWGHQTATTVSNQNGSPFHQGHSQSMQQNKSFVAHHDFALFQANEPQHQCASLRPQQSRNNTGQDALSQPKDFMEVNVSTSLRVSVNHPPSVSNPSTSQQPLSVQQFSQTASTSIHFCGNQEGNFDGQSPTITPCSVSSSQQFSSPYSYSNNHISPTSLLQPTTGLSTSQQTHSISDFTGSDAFTSQTGTKQETTEHMLNPNTALNSSTFQMLHSAHPQGNFSSSKLSPVNINFPASTGSASQISHFTDSIESNGFTSLDDNLLHQVETHNEPFTGLDPDDLLQEDLLPQFDDSAFVQDSTSHVLEHDLEHHITPQQVTSSSELVRPPSQTQIHPWHSSVSNQHLQGRSRATLQGQPPSKKTDGSGSYTKLQNTQVRGMSEKKQKKKTDSESKQEKANRIISEAIAKAKERGERNIPRVMSPENFPSVSAEGKEEKKGRKVKSKPKDKETKKPKTGSSSKIKEKTKIGKLIITLGKKQKRKNESSDELSDAKQTPQRPLKDEDSQRRSNRQVKRKKYSEEGEGKQSEEEAAKVSVKIKKNSAPLPAEQPLQLFVENPSEEDAAIVDKILSSRVIKKEISAGMTVDTEEFFVKYKNYSYLHCEWATEQQLLKDKRIQQKIKRFKVRKAQRAHFFADMEEEPFNPDYVEVDRVLEVSLCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDQAKIEEFEQLQASRPDSRRLDRPPPNSWKKIEQSREYKNGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFLYEILLTGIRGPFLIIAPLSTITNWEREFRTWTDLNVVVYHGSMISRQMIQQYEMYFRDSQGRIVRGTYRFQAIITTFEMILGGCPELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPAESTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFAFLSKGAGQANVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFKETYNPSAPDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLITRNSYEREMFDRASLKLGLDKAVLQSMSGRENSVGGIQQLSKKEIEDLLRRGAYGAIMDEEDEGSKFCEEDIDQILQRRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAEIDIDAISGRNSLVIDTPRIRKQTRPFSATKDELAELSEVESEGEEKPKLRRPCDRSNGYGRTECFRVEKNLLVYGWGRWREILSHGRFKRQLNEQDVEIICRALLAYCLVHYRGDEKIKSFIWDLITPTEDGQTRELQNHLGLSAPVPRGRKGKKVKTQASTFDIHKAEWLRKYNPEHLLQDEGYKKHIKHHCNKVLLRVRMLYYLKQEVIGNEFQKVFDGTDASEIDVWVPEPDHSEVPAEWWDADADKSLLIGVFKHGYEKYNTIRADPALCFLERVGKPDEKAVAAEQRANDYMDGDVEDPEYKPAPALFKDDIEDDVSSPGDLVIADGDGQMMEGDKIYWPTQSALTTRLRRLITAYQRTSKNRQAQQIQPTFPVQTSMMQLQYEEAALNPKMAAKIERQQRWTRREEADFYRVVSTFGVVFDPERGRFDWTKFRAMARLHKKTDDSLEKYLYAFMSMCRRVCRLPSKEELVDPNLFIQPITEERASRTLYRIELLRKVREQALRHPQLFERLKLCQPNPDLPVWWECGTHDRDLLIGAAKHGVSRTDYHILRDPELSFMSAQRNYNQN…
SIO_010081: CHD9
subclass of: SO_0000673
so part of: CHD9
location: join(1383602..1385038,1403400..1403734,1412833..1412944,1416106..1416252,1417384..1417452,1417541..1417596,1418953..1419070,1419587..1419673,1420975..1421112,1423224..1423345,1424556..1424799,1425633..1425809,1426623..1426766,1426870..1427125,1427931..1428141,1430142..1430337,1431091..1431258,1431827..1432006,1433289..1433399,1434088..1434284,1435063..1435262,1435720..1435879,1436820..1436909,1437698..1437801,1437921..1438038,1438705..1438762,1439137..1439179,1439338..1439557,1439678..1439880,1440111..1441019,1443161..1443324,1444274..1444546,1445272..1445440,1446370..1446509,1446989..1447210,1447981..1448109,1450078..1450182,1451497..1452354)
location: region:1383602-1452354:1
so has part: feature:1383602-1385038:1:exon
so has part: feature:1403400-1403734:1:exon
so has part: feature:1412833-1412944:1:exon
so has part: feature:1416106-1416252:1:exon
so has part: feature:1417384-1417452:1:exon
so has part: feature:1417541-1417596:1:exon
so has part: feature:1418953-1419070:1:exon
so has part: feature:1419587-1419673:1:exon
so has part: feature:1420975-1421112:1:exon
so has part: feature:1423224-1423345:1:exon
so has part: feature:1424556-1424799:1:exon
so has part: feature:1425633-1425809:1:exon
so has part: feature:1426623-1426766:1:exon
so has part: feature:1426870-1427125:1:exon
so has part: feature:1427931-1428141:1:exon
so has part: feature:1430142-1430337:1:exon
so has part: feature:1431091-1431258:1:exon
so has part: feature:1431827-1432006:1:exon
so has part: feature:1433289-1433399:1:exon
so has part: feature:1434088-1434284:1:exon
so has part: feature:1435063-1435262:1:exon
so has part: feature:1435720-1435879:1:exon
so has part: feature:1436820-1436909:1:exon
so has part: feature:1437698-1437801:1:exon
so has part: feature:1437921-1438038:1:exon
so has part: feature:1438705-1438762:1:exon
so has part: feature:1439137-1439179:1:exon
so has part: feature:1439338-1439557:1:exon
so has part: feature:1439678-1439880:1:exon
so has part: feature:1440111-1441019:1:exon
so has part: feature:1443161-1443324:1:exon
so has part: feature:1444274-1444546:1:exon
so has part: feature:1445272-1445440:1:exon
so has part: feature:1446370-1446509:1:exon
so has part: feature:1446989-1447210:1:exon
so has part: feature:1447981-1448109:1:exon
so has part: feature:1450078-1450182:1:exon
so has part: feature:1451497-1452354:1:exon

XP_041574543.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1383602-1385038:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1403400-1403734:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1412833-1412944:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1416106-1416252:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1417384-1417452:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1417541-1417596:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1418953-1419070:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1419587-1419673:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1420975-1421112:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1423224-1423345:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1424556-1424799:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1425633-1425809:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1426623-1426766:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1426870-1427125:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1427931-1428141:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1430142-1430337:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1431091-1431258:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1431827-1432006:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1433289-1433399:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1434088-1434284:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1435063-1435262:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1435720-1435879:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1436820-1436909:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1437698-1437801:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1437921-1438038:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1438705-1438762:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1439137-1439179:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1439338-1439557:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1439678-1439880:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1440111-1441019:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1443161-1443324:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1444274-1444546:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1445272-1445440:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1446370-1446509:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1446989-1447210:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1447981-1448109:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1450078-1450182:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1451497-1452354:1:exon

CHD9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: CHD9
product: chromodomain helicase DNA binding protein 9, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 31 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_030282535.3
SIO_010081: CHD9
subclass of: SO_0000673
so part of: CHD9
location: join(1401766..1402265,1403400..1403734,1412833..1412944,1416103..1416252,1417384..1417452,1417541..1417596,1418953..1419070,1419587..1419673,1420975..1421112,1423224..1423345,1424556..1424799,1425633..1425809,1426623..1426766,1426870..1427125,1427931..1428141,1430142..1430337,1431091..1431258,1431827..1432006,1433289..1433399,1434088..1434284,1435063..1435262,1435720..1435879,1436820..1436909,1437698..1437801,1437921..1438038,1438705..1438762,1439137..1439179,1439338..1439557,1439678..1439880,1440111..1441019,1443161..1443324,1444274..1444546,1445272..1445440,1446370..1446509,1446989..1447210,1447981..1448109,1450078..1450182,1451497..1454941)
location: region:1401766-1454941:1
so has part: feature:1401766-1402265:1:exon
so has part: feature:1403400-1403734:1:exon
so has part: feature:1412833-1412944:1:exon
so has part: feature:1416103-1416252:1:exon
so has part: feature:1417384-1417452:1:exon
so has part: feature:1417541-1417596:1:exon
so has part: feature:1418953-1419070:1:exon
so has part: feature:1419587-1419673:1:exon
so has part: feature:1420975-1421112:1:exon
so has part: feature:1423224-1423345:1:exon
so has part: feature:1424556-1424799:1:exon
so has part: feature:1425633-1425809:1:exon
so has part: feature:1426623-1426766:1:exon
so has part: feature:1426870-1427125:1:exon
so has part: feature:1427931-1428141:1:exon
so has part: feature:1430142-1430337:1:exon
so has part: feature:1431091-1431258:1:exon
so has part: feature:1431827-1432006:1:exon
so has part: feature:1433289-1433399:1:exon
so has part: feature:1434088-1434284:1:exon
so has part: feature:1435063-1435262:1:exon
so has part: feature:1435720-1435879:1:exon
so has part: feature:1436820-1436909:1:exon
so has part: feature:1437698-1437801:1:exon
so has part: feature:1437921-1438038:1:exon
so has part: feature:1438705-1438762:1:exon
so has part: feature:1439137-1439179:1:exon
so has part: feature:1439338-1439557:1:exon
so has part: feature:1439678-1439880:1:exon
so has part: feature:1440111-1441019:1:exon
so has part: feature:1443161-1443324:1:exon
so has part: feature:1444274-1444546:1:exon
so has part: feature:1445272-1445440:1:exon
so has part: feature:1446370-1446509:1:exon
so has part: feature:1446989-1447210:1:exon
so has part: feature:1447981-1448109:1:exon
so has part: feature:1450078-1450182:1:exon
so has part: feature:1451497-1454941:1:exon

position:1401766:1
position: 1401766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1401766-1402265:1:exon

position:1402265:1
position: 1402265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1403400-1403734:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1412833-1412944:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1416103-1416252:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1417384-1417452:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1417541-1417596:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1418953-1419070:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1419587-1419673:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1420975-1421112:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1423224-1423345:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1424556-1424799:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1425633-1425809:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1426623-1426766:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1426870-1427125:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1427931-1428141:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1430142-1430337:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1431091-1431258:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1431827-1432006:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1433289-1433399:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1434088-1434284:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1435063-1435262:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1435720-1435879:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1436820-1436909:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1437698-1437801:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1437921-1438038:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1438705-1438762:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1439137-1439179:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1439338-1439557:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1439678-1439880:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1440111-1441019:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1443161-1443324:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1444274-1444546:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1445272-1445440:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1446370-1446509:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1446989-1447210:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1447981-1448109:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1450078-1450182:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1451497-1454941:1:exon

CHD9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: CHD9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromodomain-helicase-DNA-binding protein 9 isoform X5
translation: MSSVKRPRGRPPSKKTDGSGSYTKLQNTQVRGMSEKKQKKKTDSESKQEKANRIISEAIAKAKERGERNIPRVMSPENFPSVSAEGKEEKKGRKVKSKPKDKETKKPKTGSSSKIKEKTKIGKLIITLGKKQKRKNESSDELSDAKQTPQRPLKDEDSQKRRSNRQVKRKKYSEEGEGKQSEEEAAKVSVKIKKNSAPLPAEQPLQLFVENPSEEDAAIVDKILSSRVIKKEISAGMTVDTEEFFVKYKNYSYLHCEWATEQQLLKDKRIQQKIKRFKVRKAQRAHFFADMEEEPFNPDYVEVDRVLEVSLCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDQAKIEEFEQLQASRPDSRRLDRPPPNSWKKIEQSREYKNGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFLYEILLTGIRGPFLIIAPLSTITNWEREFRTWTDLNVVVYHGSMISRQMIQQYEMYFRDSQGRIVRGTYRFQAIITTFEMILGGCPELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPAESTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFAFLSKGAGQANVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFKETYNPSAPDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLITRNSYEREMFDRASLKLGLDKAVLQSMSGRENSVGGIQQLSKKEIEDLLRRGAYGAIMDEEDEGSKFCEEDIDQILQRRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAEIDIDAISGRNSLVIDTPRIRKQTRPFSATKDELAELSEVESEGEEKPKLRRPCDRSNGYGRTECFRVEKNLLVYGWGRWREILSHGRFKRQLNEQDVEIICRALLAYCLVHYRGDEKIKSFIWDLITPTEDGQTRELQNHLGLSAPVPRGRKGKKVKTQASTFDIHKAEWLRKYNPEHLLQDEGYKKHIKHHCNKVLLRVRMLYYLKQEVIGNEFQKVFDGTDASEIDVWVPEPDHSEVPAEWWDADADKSLLIGVFKHGYEKYNTIRADPALCFLERVGKPDEKAVAAEQRANDYMDGDVEDPEYKPAPALFKDDIEDDVSSPGDLVIADGDGQMMEGDKIYWPTQSALTTRLRRLITAYQRTSKNRQAQQIQPTFPVQTSMMQLQYEEAALNPKMAAKIERQQRWTRREEADFYRVVSTFGVVFDPERGRFDWTKFRAMARLHKKTDDSLEKYLYAFMSMCRRVCRLPSKEELVDPNLFIQPITEERASRTLYRIELLRKVREQALRHPQLFERLKLCQPNPDLPVWWECGTHDRDLLIGAAKHGVSRTDYHILRDPELSFMSAQRNYNQNKAVLSRTSTPLLHQYQMALSASPLTPQSRLSDAKVNAFEDTKAKNENMKEDPQSSEEESMSTEETQTILKSEPLSPKNGTPMQITDHRPSVKAETDRRMVAARTEPLTPNPASKKQRVSKRGSDSSSDSDSDSDRSSCSSRSSSSSSSSSSSCSHSRSGSSSSSSSSCSSASSSSSSSSSSSSSSSSSSSEESDSDEEEAQKRAEGTPHIKAYDEESVASLSTTQDETQDSFQMNNGTPNSGYLLQGGYMLAASYWPKDRVMINRLDSICQTVLKGKWPSARRSYDSATVASFYTTKLLDSSGAAAEYSEPSAPTPPLAAVKEEYDQSPQLSKVKKHVREKEFTVKINDEGGLKLTFQKQGLSQKRPFESEEGALGQQQYLARLRELQNASETSLVNFPKSLPKSGTSSHLTASANGVIVDSQPVVKKRRGRRKNVEGVDVLFMNRSKQPNHVNPGINSCQVAAGINP…
SIO_010081: CHD9
subclass of: SO_0000673
so part of: CHD9
location: join(1402236..1402265,1403400..1403734,1412833..1412944,1416103..1416252,1417384..1417452,1417541..1417596,1418953..1419070,1419587..1419673,1420975..1421112,1423224..1423345,1424556..1424799,1425633..1425809,1426623..1426766,1426870..1427125,1427931..1428141,1430142..1430337,1431091..1431258,1431827..1432006,1433289..1433399,1434088..1434284,1435063..1435262,1435720..1435879,1436820..1436909,1437698..1437801,1437921..1438038,1438705..1438762,1439137..1439179,1439338..1439557,1439678..1439880,1440111..1441019,1443161..1443324,1444274..1444546,1445272..1445440,1446370..1446509,1446989..1447210,1447981..1448109,1450078..1450182,1451497..1452354)
location: region:1402236-1452354:1
so has part: feature:1402236-1402265:1:exon
so has part: feature:1403400-1403734:1:exon
so has part: feature:1412833-1412944:1:exon
so has part: feature:1416103-1416252:1:exon
so has part: feature:1417384-1417452:1:exon
so has part: feature:1417541-1417596:1:exon
so has part: feature:1418953-1419070:1:exon
so has part: feature:1419587-1419673:1:exon
so has part: feature:1420975-1421112:1:exon
so has part: feature:1423224-1423345:1:exon
so has part: feature:1424556-1424799:1:exon
so has part: feature:1425633-1425809:1:exon
so has part: feature:1426623-1426766:1:exon
so has part: feature:1426870-1427125:1:exon
so has part: feature:1427931-1428141:1:exon
so has part: feature:1430142-1430337:1:exon
so has part: feature:1431091-1431258:1:exon
so has part: feature:1431827-1432006:1:exon
so has part: feature:1433289-1433399:1:exon
so has part: feature:1434088-1434284:1:exon
so has part: feature:1435063-1435262:1:exon
so has part: feature:1435720-1435879:1:exon
so has part: feature:1436820-1436909:1:exon
so has part: feature:1437698-1437801:1:exon
so has part: feature:1437921-1438038:1:exon
so has part: feature:1438705-1438762:1:exon
so has part: feature:1439137-1439179:1:exon
so has part: feature:1439338-1439557:1:exon
so has part: feature:1439678-1439880:1:exon
so has part: feature:1440111-1441019:1:exon
so has part: feature:1443161-1443324:1:exon
so has part: feature:1444274-1444546:1:exon
so has part: feature:1445272-1445440:1:exon
so has part: feature:1446370-1446509:1:exon
so has part: feature:1446989-1447210:1:exon
so has part: feature:1447981-1448109:1:exon
so has part: feature:1450078-1450182:1:exon
so has part: feature:1451497-1452354:1:exon

XP_030138395.3
type: Protein
SIO_000068: ncbiprotein

position:1402236:1
position: 1402236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1402236-1402265:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1403400-1403734:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1412833-1412944:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1416103-1416252:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1417384-1417452:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1417541-1417596:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1418953-1419070:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1419587-1419673:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1420975-1421112:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1423224-1423345:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1424556-1424799:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1425633-1425809:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1426623-1426766:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1426870-1427125:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1427931-1428141:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1430142-1430337:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1431091-1431258:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1431827-1432006:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1433289-1433399:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1434088-1434284:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1435063-1435262:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1435720-1435879:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1436820-1436909:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1437698-1437801:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1437921-1438038:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1438705-1438762:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1439137-1439179:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1439338-1439557:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1439678-1439880:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1440111-1441019:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1443161-1443324:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1444274-1444546:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1445272-1445440:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1446370-1446509:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1446989-1447210:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1447981-1448109:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1450078-1450182:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1451497-1452354:1:exon

CHD9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: CHD9
product: chromodomain helicase DNA binding protein 9, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 29 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_030282536.3
SIO_010081: CHD9
subclass of: SO_0000673
so part of: CHD9
location: join(1402421..1402592,1403400..1403734,1412833..1412944,1416103..1416252,1417384..1417452,1417541..1417596,1418953..1419070,1419587..1419673,1420975..1421112,1423224..1423345,1424556..1424799,1425633..1425809,1426623..1426766,1426870..1427125,1427931..1428141,1430142..1430337,1431091..1431258,1431827..1432006,1433289..1433399,1434088..1434284,1435063..1435262,1435720..1435879,1436820..1436909,1437698..1437801,1437921..1438038,1438705..1438762,1439137..1439179,1439338..1439557,1439678..1439880,1440111..1441019,1443161..1443324,1444274..1444546,1445272..1445440,1446370..1446509,1446989..1447210,1447981..1448109,1450078..1450182,1451497..1454941)
location: region:1402421-1454941:1
so has part: feature:1402421-1402592:1:exon
so has part: feature:1403400-1403734:1:exon
so has part: feature:1412833-1412944:1:exon
so has part: feature:1416103-1416252:1:exon
so has part: feature:1417384-1417452:1:exon
so has part: feature:1417541-1417596:1:exon
so has part: feature:1418953-1419070:1:exon
so has part: feature:1419587-1419673:1:exon
so has part: feature:1420975-1421112:1:exon
so has part: feature:1423224-1423345:1:exon
so has part: feature:1424556-1424799:1:exon
so has part: feature:1425633-1425809:1:exon
so has part: feature:1426623-1426766:1:exon
so has part: feature:1426870-1427125:1:exon
so has part: feature:1427931-1428141:1:exon
so has part: feature:1430142-1430337:1:exon
so has part: feature:1431091-1431258:1:exon
so has part: feature:1431827-1432006:1:exon
so has part: feature:1433289-1433399:1:exon
so has part: feature:1434088-1434284:1:exon
so has part: feature:1435063-1435262:1:exon
so has part: feature:1435720-1435879:1:exon
so has part: feature:1436820-1436909:1:exon
so has part: feature:1437698-1437801:1:exon
so has part: feature:1437921-1438038:1:exon
so has part: feature:1438705-1438762:1:exon
so has part: feature:1439137-1439179:1:exon
so has part: feature:1439338-1439557:1:exon
so has part: feature:1439678-1439880:1:exon
so has part: feature:1440111-1441019:1:exon
so has part: feature:1443161-1443324:1:exon
so has part: feature:1444274-1444546:1:exon
so has part: feature:1445272-1445440:1:exon
so has part: feature:1446370-1446509:1:exon
so has part: feature:1446989-1447210:1:exon
so has part: feature:1447981-1448109:1:exon
so has part: feature:1450078-1450182:1:exon
so has part: feature:1451497-1454941:1:exon

position:1402421:1
position: 1402421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1402421-1402592:1:exon

position:1402592:1
position: 1402592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1403400-1403734:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1412833-1412944:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1416103-1416252:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1417384-1417452:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1417541-1417596:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1418953-1419070:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1419587-1419673:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1420975-1421112:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1423224-1423345:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1424556-1424799:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1425633-1425809:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1426623-1426766:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1426870-1427125:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1427931-1428141:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1430142-1430337:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1431091-1431258:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1431827-1432006:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1433289-1433399:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1434088-1434284:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1435063-1435262:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1435720-1435879:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1436820-1436909:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1437698-1437801:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1437921-1438038:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1438705-1438762:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1439137-1439179:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1439338-1439557:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1439678-1439880:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1440111-1441019:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1443161-1443324:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1444274-1444546:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1445272-1445440:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1446370-1446509:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1446989-1447210:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1447981-1448109:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1450078-1450182:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1451497-1454941:1:exon

CHD9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: CHD9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromodomain-helicase-DNA-binding protein 9 isoform X6
translation: MSEKKQKKKTDSESKQEKANRIISEAIAKAKERGERNIPRVMSPENFPSVSAEGKEEKKGRKVKSKPKDKETKKPKTGSSSKIKEKTKIGKLIITLGKKQKRKNESSDELSDAKQTPQRPLKDEDSQKRRSNRQVKRKKYSEEGEGKQSEEEAAKVSVKIKKNSAPLPAEQPLQLFVENPSEEDAAIVDKILSSRVIKKEISAGMTVDTEEFFVKYKNYSYLHCEWATEQQLLKDKRIQQKIKRFKVRKAQRAHFFADMEEEPFNPDYVEVDRVLEVSLCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDQAKIEEFEQLQASRPDSRRLDRPPPNSWKKIEQSREYKNGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFLYEILLTGIRGPFLIIAPLSTITNWEREFRTWTDLNVVVYHGSMISRQMIQQYEMYFRDSQGRIVRGTYRFQAIITTFEMILGGCPELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPAESTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFAFLSKGAGQANVPNLVNTMMELRKCCNHPYLIKGAEEKILGEFKETYNPSAPDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLITRNSYEREMFDRASLKLGLDKAVLQSMSGRENSVGGIQQLSKKEIEDLLRRGAYGAIMDEEDEGSKFCEEDIDQILQRRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAEIDIDAISGRNSLVIDTPRIRKQTRPFSATKDELAELSEVESEGEEKPKLRRPCDRSNGYGRTECFRVEKNLLVYGWGRWREILSHGRFKRQLNEQDVEIICRALLAYCLVHYRGDEKIKSFIWDLITPTEDGQTRELQNHLGLSAPVPRGRKGKKVKTQASTFDIHKAEWLRKYNPEHLLQDEGYKKHIKHHCNKVLLRVRMLYYLKQEVIGNEFQKVFDGTDASEIDVWVPEPDHSEVPAEWWDADADKSLLIGVFKHGYEKYNTIRADPALCFLERVGKPDEKAVAAEQRANDYMDGDVEDPEYKPAPALFKDDIEDDVSSPGDLVIADGDGQMMEGDKIYWPTQSALTTRLRRLITAYQRTSKNRQAQQIQPTFPVQTSMMQLQYEEAALNPKMAAKIERQQRWTRREEADFYRVVSTFGVVFDPERGRFDWTKFRAMARLHKKTDDSLEKYLYAFMSMCRRVCRLPSKEELVDPNLFIQPITEERASRTLYRIELLRKVREQALRHPQLFERLKLCQPNPDLPVWWECGTHDRDLLIGAAKHGVSRTDYHILRDPELSFMSAQRNYNQNKAVLSRTSTPLLHQYQMALSASPLTPQSRLSDAKVNAFEDTKAKNENMKEDPQSSEEESMSTEETQTILKSEPLSPKNGTPMQITDHRPSVKAETDRRMVAARTEPLTPNPASKKQRVSKRGSDSSSDSDSDSDRSSCSSRSSSSSSSSSSSCSHSRSGSSSSSSSSCSSASSSSSSSSSSSSSSSSSSSEESDSDEEEAQKRAEGTPHIKAYDEESVASLSTTQDETQDSFQMNNGTPNSGYLLQGGYMLAASYWPKDRVMINRLDSICQTVLKGKWPSARRSYDSATVASFYTTKLLDSSGAAAEYSEPSAPTPPLAAVKEEYDQSPQLSKVKKHVREKEFTVKINDEGGLKLTFQKQGLSQKRPFESEEGALGQQQYLARLRELQNASETSLVNFPKSLPKSGTSSHLTASANGVIVDSQPVVKKRRGRRKNVEGVDVLFMNRSKQPNHVNPGINSCQVAAGINPALTYTQSQGMLDAESPVPVINLKDGTRLAGDD…
SIO_010081: CHD9
subclass of: SO_0000673
so part of: CHD9
location: join(1403466..1403734,1412833..1412944,1416103..1416252,1417384..1417452,1417541..1417596,1418953..1419070,1419587..1419673,1420975..1421112,1423224..1423345,1424556..1424799,1425633..1425809,1426623..1426766,1426870..1427125,1427931..1428141,1430142..1430337,1431091..1431258,1431827..1432006,1433289..1433399,1434088..1434284,1435063..1435262,1435720..1435879,1436820..1436909,1437698..1437801,1437921..1438038,1438705..1438762,1439137..1439179,1439338..1439557,1439678..1439880,1440111..1441019,1443161..1443324,1444274..1444546,1445272..1445440,1446370..1446509,1446989..1447210,1447981..1448109,1450078..1450182,1451497..1452354)
location: region:1403466-1452354:1
so has part: feature:1403466-1403734:1:exon
so has part: feature:1412833-1412944:1:exon
so has part: feature:1416103-1416252:1:exon
so has part: feature:1417384-1417452:1:exon
so has part: feature:1417541-1417596:1:exon
so has part: feature:1418953-1419070:1:exon
so has part: feature:1419587-1419673:1:exon
so has part: feature:1420975-1421112:1:exon
so has part: feature:1423224-1423345:1:exon
so has part: feature:1424556-1424799:1:exon
so has part: feature:1425633-1425809:1:exon
so has part: feature:1426623-1426766:1:exon
so has part: feature:1426870-1427125:1:exon
so has part: feature:1427931-1428141:1:exon
so has part: feature:1430142-1430337:1:exon
so has part: feature:1431091-1431258:1:exon
so has part: feature:1431827-1432006:1:exon
so has part: feature:1433289-1433399:1:exon
so has part: feature:1434088-1434284:1:exon
so has part: feature:1435063-1435262:1:exon
so has part: feature:1435720-1435879:1:exon
so has part: feature:1436820-1436909:1:exon
so has part: feature:1437698-1437801:1:exon
so has part: feature:1437921-1438038:1:exon
so has part: feature:1438705-1438762:1:exon
so has part: feature:1439137-1439179:1:exon
so has part: feature:1439338-1439557:1:exon
so has part: feature:1439678-1439880:1:exon
so has part: feature:1440111-1441019:1:exon
so has part: feature:1443161-1443324:1:exon
so has part: feature:1444274-1444546:1:exon
so has part: feature:1445272-1445440:1:exon
so has part: feature:1446370-1446509:1:exon
so has part: feature:1446989-1447210:1:exon
so has part: feature:1447981-1448109:1:exon
so has part: feature:1450078-1450182:1:exon
so has part: feature:1451497-1452354:1:exon

XP_030138396.3
type: Protein
SIO_000068: ncbiprotein

position:1403466:1
position: 1403466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1403466-1403734:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1412833-1412944:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1416103-1416252:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1417384-1417452:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1417541-1417596:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1418953-1419070:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1419587-1419673:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1420975-1421112:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1423224-1423345:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1424556-1424799:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1425633-1425809:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1426623-1426766:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1426870-1427125:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1427931-1428141:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1430142-1430337:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1431091-1431258:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1431827-1432006:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1433289-1433399:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1434088-1434284:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1435063-1435262:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1435720-1435879:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1436820-1436909:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1437698-1437801:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1437921-1438038:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1438705-1438762:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1439137-1439179:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1439338-1439557:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1439678-1439880:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1440111-1441019:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1443161-1443324:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1444274-1444546:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1445272-1445440:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1446370-1446509:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1446989-1447210:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1447981-1448109:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1450078-1450182:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1451497-1452354:1:exon

RBL2
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: RBL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1458585..1478211
location: region:1458585-1478211:1
so has part: feature:1458585-1478211:1:exon
subclass of: SO_0000010

100230395
type: Gene
SIO_000068: ncbigene

position:1458585:1
position: 1458585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1478211:1
position: 1478211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1458585-1478211:1:exon

RBL2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: RBL2
product: RB transcriptional corepressor like 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_030282132.3
SIO_010081: RBL2
subclass of: SO_0000673
so part of: RBL2
location: join(1458585..1458780,1460079..1460209,1461414..1461614,1462318..1462382,1465644..1465772,1466576..1466736,1466842..1466906,1467612..1467798,1468489..1468655,1469152..1469261,1470130..1470233,1470951..1471115,1471601..1471712,1472298..1472570,1472872..1473143,1473723..1473899,1474067..1474138,1474530..1474644,1475637..1475839,1476039..1476206,1476535..1478211)
location: region:1458585-1478211:1
so has part: feature:1458585-1458780:1:exon
so has part: feature:1460079-1460209:1:exon
so has part: feature:1461414-1461614:1:exon
so has part: feature:1462318-1462382:1:exon
so has part: feature:1465644-1465772:1:exon
so has part: feature:1466576-1466736:1:exon
so has part: feature:1466842-1466906:1:exon
so has part: feature:1467612-1467798:1:exon
so has part: feature:1468489-1468655:1:exon
so has part: feature:1469152-1469261:1:exon
so has part: feature:1470130-1470233:1:exon
so has part: feature:1470951-1471115:1:exon
so has part: feature:1471601-1471712:1:exon
so has part: feature:1472298-1472570:1:exon
so has part: feature:1472872-1473143:1:exon
so has part: feature:1473723-1473899:1:exon
so has part: feature:1474067-1474138:1:exon
so has part: feature:1474530-1474644:1:exon
so has part: feature:1475637-1475839:1:exon
so has part: feature:1476039-1476206:1:exon
so has part: feature:1476535-1478211:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1458585-1458780:1:exon

position:1458780:1
position: 1458780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1460079-1460209:1:exon

position:1460079:1
position: 1460079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1460209:1
position: 1460209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1461414-1461614:1:exon

position:1461414:1
position: 1461414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1461614:1
position: 1461614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1462318-1462382:1:exon

position:1462318:1
position: 1462318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1462382:1
position: 1462382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1465644-1465772:1:exon

position:1465644:1
position: 1465644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1465772:1
position: 1465772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1466576-1466736:1:exon

position:1466576:1
position: 1466576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1466736:1
position: 1466736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1466842-1466906:1:exon

position:1466842:1
position: 1466842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1466906:1
position: 1466906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1467612-1467798:1:exon

position:1467612:1
position: 1467612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1467798:1
position: 1467798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1468489-1468655:1:exon

position:1468489:1
position: 1468489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1468655:1
position: 1468655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1469152-1469261:1:exon

position:1469152:1
position: 1469152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1469261:1
position: 1469261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1470130-1470233:1:exon

position:1470130:1
position: 1470130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1470233:1
position: 1470233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1470951-1471115:1:exon

position:1470951:1
position: 1470951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1471115:1
position: 1471115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1471601-1471712:1:exon

position:1471601:1
position: 1471601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1471712:1
position: 1471712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1472298-1472570:1:exon

position:1472298:1
position: 1472298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1472570:1
position: 1472570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1472872-1473143:1:exon

position:1472872:1
position: 1472872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1473143:1
position: 1473143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1473723-1473899:1:exon

position:1473723:1
position: 1473723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1473899:1
position: 1473899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1474067-1474138:1:exon

position:1474067:1
position: 1474067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1474138:1
position: 1474138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1474530-1474644:1:exon

position:1474530:1
position: 1474530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1474644:1
position: 1474644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1475637-1475839:1:exon

position:1475637:1
position: 1475637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1475839:1
position: 1475839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1476039-1476206:1:exon

position:1476039:1
position: 1476039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1476206:1
position: 1476206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1476535-1478211:1:exon

position:1476535:1
position: 1476535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RBL2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: RBL2
product: RB transcriptional corepressor like 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, 1 long SRA read, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 55 samples with support for all annotated introns
transcript id: XM_030282131.3
SIO_010081: RBL2
subclass of: SO_0000673
so part of: RBL2
location: join(1458586..1458780,1460079..1460209,1461414..1461614,1462318..1462382,1465644..1465772,1466576..1466736,1466842..1466906,1467612..1467798,1468489..1468655,1469152..1469261,1470130..1470233,1470605..1470742,1470951..1471115,1471601..1471712,1472298..1472570,1472872..1473143,1473723..1473899,1474067..1474138,1474530..1474644,1475637..1475839,1476039..1476206,1476535..1478211)
location: region:1458586-1478211:1
so has part: feature:1458586-1458780:1:exon
so has part: feature:1460079-1460209:1:exon
so has part: feature:1461414-1461614:1:exon
so has part: feature:1462318-1462382:1:exon
so has part: feature:1465644-1465772:1:exon
so has part: feature:1466576-1466736:1:exon
so has part: feature:1466842-1466906:1:exon
so has part: feature:1467612-1467798:1:exon
so has part: feature:1468489-1468655:1:exon
so has part: feature:1469152-1469261:1:exon
so has part: feature:1470130-1470233:1:exon
so has part: feature:1470605-1470742:1:exon
so has part: feature:1470951-1471115:1:exon
so has part: feature:1471601-1471712:1:exon
so has part: feature:1472298-1472570:1:exon
so has part: feature:1472872-1473143:1:exon
so has part: feature:1473723-1473899:1:exon
so has part: feature:1474067-1474138:1:exon
so has part: feature:1474530-1474644:1:exon
so has part: feature:1475637-1475839:1:exon
so has part: feature:1476039-1476206:1:exon
so has part: feature:1476535-1478211:1:exon

position:1458586:1
position: 1458586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1458586-1458780:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1460079-1460209:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1461414-1461614:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1462318-1462382:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1465644-1465772:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1466576-1466736:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1466842-1466906:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1467612-1467798:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1468489-1468655:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1469152-1469261:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1470130-1470233:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1470605-1470742:1:exon

position:1470605:1
position: 1470605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1470742:1
position: 1470742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1470951-1471115:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1471601-1471712:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1472298-1472570:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1472872-1473143:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1473723-1473899:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1474067-1474138:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1474530-1474644:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1475637-1475839:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1476039-1476206:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1476535-1478211:1:exon

RBL2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: RBL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: retinoblastoma-like protein 2 isoform X1
translation: MAGEEAAGAEPGPAGAAAAAPSPPGEDGETRQRYEELCRSLNMDERARAEAWLSYQSMRRNYTLEGNDMHWLACALYVACRKAIPTVSRGTAEGNYVSLTRILRCSDQSLIEFFNKMKKWEDMANLPSQFRERTERLERNFTVSAVIFKKYEPIFQDIFRYPQEDQPRQQRGRKQRRQPCTVTEVFQFCWVLFVHAKGNFPMISDDLVNSYHLLLCALDLVYGNALQCPNRKELLNPNFKGLPEDFHSKDYKVSSDPPCIIEKLCSLHYGLVLEAKGIKEHFWKPYIRKLFDKKLLKGKDENLTGFLDPGNFGDSVKAINKAYEEYVLSVGNLDERIFLGEDADEEIGTLTRCLNTPSGQETAERVQVKHNLQQHFDRSKSLRTTTPLTGRKYIKESNPYVTPVSIATYSLSRLHTMLAGLKNAPSENLEQILRSCSRDPSQSIANRVKEMHDVYCQSTQSEGEFSNFSKDVASKHFRRAEMLYYKVLESVIEQERKRLGDTDLSAILEQDVFHRSLLACCLEIITFTYNPPGNFPFVTEIFDIPVYHFYKVIEVFIRAEDGLCREVVKHLNHIEEQILESMAWKRESVLWDRIRENENKVPTCEEVMPPQYFERSAGSSVVGSPLTPRRINEVRAESGGLGKGLSSPPATLYDRYSSPTANPTRRRLFADTDGAPEGGTAVRVPPQPVVSTVPVQNVSPEAVSVTPVPGQTLVTVATATVTANNGQTVTIPVQGIANENGGITFFPVQVNVGTQPQTVSGPMQPLSAQTLAGTLNPQLAGAALQLPGQLTVQQISPGEQRQTQHFSATAIRPRKMGSLALFFRKVYHLASVRLRDLCAKLDVSDELRKKIWTCFEYSLVHCPEIMMDRHLDQLLMCAIYVMTKVTNEDRSFQNIMRCYRTQPQAKSHVYRSVLIKGRRRRHSGSSDSSSQQNSPTDRSKDKNKERSSRDSSPVMRSSSTLPVPQPSSAPPTPTRLSGPNSDTEEEERGDLIQFYNNVYIEQIKDFALKYTSNAQTESPPLSPYPFVRLGSPRRVQLSQHHPLYISPHRNESALSPQEKIFYYFSSSPSKRLKEINSMVRTGETPTKKRGILLEDGTEAPAKRICQENHTALLRRLQDVANDRGSH
SIO_010081: RBL2
subclass of: SO_0000673
so part of: RBL2
location: join(1458586..1458780,1460079..1460209,1461414..1461614,1462318..1462382,1465644..1465772,1466576..1466736,1466842..1466906,1467612..1467798,1468489..1468655,1469152..1469261,1470130..1470233,1470605..1470742,1470951..1471115,1471601..1471712,1472298..1472570,1472872..1473143,1473723..1473899,1474067..1474138,1474530..1474644,1475637..1475839,1476039..1476206,1476535..1476705)
location: region:1458586-1476705:1
so has part: feature:1458586-1458780:1:exon
so has part: feature:1460079-1460209:1:exon
so has part: feature:1461414-1461614:1:exon
so has part: feature:1462318-1462382:1:exon
so has part: feature:1465644-1465772:1:exon
so has part: feature:1466576-1466736:1:exon
so has part: feature:1466842-1466906:1:exon
so has part: feature:1467612-1467798:1:exon
so has part: feature:1468489-1468655:1:exon
so has part: feature:1469152-1469261:1:exon
so has part: feature:1470130-1470233:1:exon
so has part: feature:1470605-1470742:1:exon
so has part: feature:1470951-1471115:1:exon
so has part: feature:1471601-1471712:1:exon
so has part: feature:1472298-1472570:1:exon
so has part: feature:1472872-1473143:1:exon
so has part: feature:1473723-1473899:1:exon
so has part: feature:1474067-1474138:1:exon
so has part: feature:1474530-1474644:1:exon
so has part: feature:1475637-1475839:1:exon
so has part: feature:1476039-1476206:1:exon
so has part: feature:1476535-1476705:1:exon

XP_030137991.1
type: Protein
SIO_000068: ncbiprotein

position:1476705:1
position: 1476705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1458586-1458780:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1460079-1460209:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1461414-1461614:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1462318-1462382:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1465644-1465772:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1466576-1466736:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1466842-1466906:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1467612-1467798:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1468489-1468655:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1469152-1469261:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1470130-1470233:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1470605-1470742:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1470951-1471115:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1471601-1471712:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1472298-1472570:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1472872-1473143:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1473723-1473899:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1474067-1474138:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1474530-1474644:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1475637-1475839:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1476039-1476206:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1476535-1476705:1:exon

RBL2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: RBL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: retinoblastoma-like protein 2 isoform X3
translation: MAGEEAAGAEPGPAGAAAAAPSPPGEDGETRQRYEELCRSLNMDERARAEAWLSYQSMRRNYTLEGNDMHWLACALYVACRKAIPTVSRGTAEGNYVSLTRILRCSDQSLIEFFNKMKKWEDMANLPSQFRERTERLERNFTVSAVIFKKYEPIFQDIFRYPQEDQPRQQRGRKQRRQPCTVTEVFQFCWVLFVHAKGNFPMISDDLVNSYHLLLCALDLVYGNALQCPNRKELLNPNFKGLPEDFHSKDYKVSSDPPCIIEKLCSLHYGLVLEAKGIKEHFWKPYIRKLFDKKLLKGKDENLTGFLDPGNFGDSVKAINKAYEEYVLSVGNLDERIFLGEDADEEIGTLTRCLNTPSGQETAERVQVKHNLQQHFDRSKSLRTTTPLTGRKYIKESNPYVTPVSIATYSLSRLHTMLAGLKNAPSENLEQILRSCSRDPSQSIANRVKEMHDVYCQSTQSEGEFSNFSKDVASKHFRRAEMLYYKVLESVIEQERKRLGDTDLSVIEVFIRAEDGLCREVVKHLNHIEEQILESMAWKRESVLWDRIRENENKVPTCEEVMPPQYFERSAGSSVVGSPLTPRRINEVRAESGGLGKGLSSPPATLYDRYSSPTANPTRRRLFADTDGAPEGGTAVRVPPQPVVSTVPVQNVSPEAVSVTPVPGQTLVTVATATVTANNGQTVTIPVQGIANENGGITFFPVQVNVGTQPQTVSGPMQPLSAQTLAGTLNPQLAGAALQLPGQLTVQQISPGEQRQTQHFSATAIRPRKMGSLALFFRKVYHLASVRLRDLCAKLDVSDELRKKIWTCFEYSLVHCPEIMMDRHLDQLLMCAIYVMTKVTNEDRSFQNIMRCYRTQPQAKSHVYRSVLIKGRRRRHSGSSDSSSQQNSPTDRSKDKNKERSSRDSSPVMRSSSTLPVPQPSSAPPTPTRLSGPNSDTEEEERGDLIQFYNNVYIEQIKDFALKYTSNAQTESPPLSPYPFVRLGSPRRVQLSQHHPLYISPHRNESALSPQEKIFYYFSSSPSKRLKEINSMVRTGETPTKKRGILLEDGTEAPAKRICQENHTALLRRLQDVANDRGSH
SIO_010081: RBL2
subclass of: SO_0000673
so part of: RBL2
location: join(1458586..1458780,1460079..1460209,1461414..1461614,1462318..1462382,1465644..1465772,1466576..1466736,1466842..1466906,1467612..1467798,1468489..1468655,1469152..1469261,1470130..1470233,1470951..1471115,1471601..1471712,1472298..1472570,1472872..1473143,1473723..1473899,1474067..1474138,1474530..1474644,1475637..1475839,1476039..1476206,1476535..1476705)
location: region:1458586-1476705:1
so has part: feature:1458586-1458780:1:exon
so has part: feature:1460079-1460209:1:exon
so has part: feature:1461414-1461614:1:exon
so has part: feature:1462318-1462382:1:exon
so has part: feature:1465644-1465772:1:exon
so has part: feature:1466576-1466736:1:exon
so has part: feature:1466842-1466906:1:exon
so has part: feature:1467612-1467798:1:exon
so has part: feature:1468489-1468655:1:exon
so has part: feature:1469152-1469261:1:exon
so has part: feature:1470130-1470233:1:exon
so has part: feature:1470951-1471115:1:exon
so has part: feature:1471601-1471712:1:exon
so has part: feature:1472298-1472570:1:exon
so has part: feature:1472872-1473143:1:exon
so has part: feature:1473723-1473899:1:exon
so has part: feature:1474067-1474138:1:exon
so has part: feature:1474530-1474644:1:exon
so has part: feature:1475637-1475839:1:exon
so has part: feature:1476039-1476206:1:exon
so has part: feature:1476535-1476705:1:exon

XP_030137992.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1458586-1458780:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1460079-1460209:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1461414-1461614:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1462318-1462382:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1465644-1465772:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1466576-1466736:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1466842-1466906:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1467612-1467798:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1468489-1468655:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1469152-1469261:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1470130-1470233:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1470951-1471115:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1471601-1471712:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1472298-1472570:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1472872-1473143:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1473723-1473899:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1474067-1474138:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1474530-1474644:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1475637-1475839:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1476039-1476206:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1476535-1476705:1:exon

RBL2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: RBL2
product: RB transcriptional corepressor like 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, 1 long SRA read, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 99 samples with support for all annotated introns
transcript id: XM_012570399.4
SIO_010081: RBL2
subclass of: SO_0000673
so part of: RBL2
location: join(1458587..1458780,1460079..1460209,1461414..1461614,1462318..1462382,1465644..1465772,1466576..1466736,1466842..1466906,1467612..1467798,1468489..1468655,1469152..1469261,1470130..1470233,1470605..1470742,1470951..1471115,1471601..1471712,1472298..1472570,1472872..1473143,1473723..1473899,1474067..1474138,1474530..1474644,1475637..1475839,1476042..1476206,1476535..1478211)
location: region:1458587-1478211:1
so has part: feature:1458587-1458780:1:exon
so has part: feature:1460079-1460209:1:exon
so has part: feature:1461414-1461614:1:exon
so has part: feature:1462318-1462382:1:exon
so has part: feature:1465644-1465772:1:exon
so has part: feature:1466576-1466736:1:exon
so has part: feature:1466842-1466906:1:exon
so has part: feature:1467612-1467798:1:exon
so has part: feature:1468489-1468655:1:exon
so has part: feature:1469152-1469261:1:exon
so has part: feature:1470130-1470233:1:exon
so has part: feature:1470605-1470742:1:exon
so has part: feature:1470951-1471115:1:exon
so has part: feature:1471601-1471712:1:exon
so has part: feature:1472298-1472570:1:exon
so has part: feature:1472872-1473143:1:exon
so has part: feature:1473723-1473899:1:exon
so has part: feature:1474067-1474138:1:exon
so has part: feature:1474530-1474644:1:exon
so has part: feature:1475637-1475839:1:exon
so has part: feature:1476042-1476206:1:exon
so has part: feature:1476535-1478211:1:exon

position:1458587:1
position: 1458587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1458587-1458780:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1460079-1460209:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1461414-1461614:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1462318-1462382:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1465644-1465772:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1466576-1466736:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1466842-1466906:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1467612-1467798:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1468489-1468655:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1469152-1469261:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1470130-1470233:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1470605-1470742:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1470951-1471115:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1471601-1471712:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1472298-1472570:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1472872-1473143:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1473723-1473899:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1474067-1474138:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1474530-1474644:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1475637-1475839:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1476042-1476206:1:exon

position:1476042:1
position: 1476042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1476535-1478211:1:exon

RBL2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: RBL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: retinoblastoma-like protein 2 isoform X2
translation: MDERARAEAWLSYQSMRRNYTLEGNDMHWLACALYVACRKAIPTVSRGTAEGNYVSLTRILRCSDQSLIEFFNKMKKWEDMANLPSQFRERTERLERNFTVSAVIFKKYEPIFQDIFRYPQEDQPRQQRGRKQRRQPCTVTEVFQFCWVLFVHAKGNFPMISDDLVNSYHLLLCALDLVYGNALQCPNRKELLNPNFKGLPEDFHSKDYKVSSDPPCIIEKLCSLHYGLVLEAKGIKEHFWKPYIRKLFDKKLLKGKDENLTGFLDPGNFGDSVKAINKAYEEYVLSVGNLDERIFLGEDADEEIGTLTRCLNTPSGQETAERVQVKHNLQQHFDRSKSLRTTTPLTGRKYIKESNPYVTPVSIATYSLSRLHTMLAGLKNAPSENLEQILRSCSRDPSQSIANRVKEMHDVYCQSTQSEGEFSNFSKDVASKHFRRAEMLYYKVLESVIEQERKRLGDTDLSAILEQDVFHRSLLACCLEIITFTYNPPGNFPFVTEIFDIPVYHFYKVIEVFIRAEDGLCREVVKHLNHIEEQILESMAWKRESVLWDRIRENENKVPTCEEVMPPQYFERSAGSSVVGSPLTPRRINEVRAESGGLGKGLSSPPATLYDRYSSPTANPTRRRLFADTDGAPEGGTAVRVPPQPVVSTVPVQNVSPEAVSVTPVPGQTLVTVATATVTANNGQTVTIPVQGIANENGGITFFPVQVNVGTQPQTVSGPMQPLSAQTLAGTLNPQLAGAALQLPGQLTVQQISPGEQRQTQHFSATAIRPRKMGSLALFFRKVYHLASVRLRDLCAKLDVSDELRKKIWTCFEYSLVHCPEIMMDRHLDQLLMCAIYVMTKVTNEDRSFQNIMRCYRTQPQAKSHVYRSVLIKGRRRRHSGSSDSSSQQNSPTDRSKDKNKERSSRDSSPVMRSSSTLPVPQPSSAPPTPTRLSGPNSDTEEEERGDLIQFYNNVYIEQIKDFALKYTSNATESPPLSPYPFVRLGSPRRVQLSQHHPLYISPHRNESALSPQEKIFYYFSSSPSKRLKEINSMVRTGETPTKKRGILLEDGTEAPAKRICQENHTALLRRLQDVANDRGSH
SIO_010081: RBL2
subclass of: SO_0000673
so part of: RBL2
location: join(1458712..1458780,1460079..1460209,1461414..1461614,1462318..1462382,1465644..1465772,1466576..1466736,1466842..1466906,1467612..1467798,1468489..1468655,1469152..1469261,1470130..1470233,1470605..1470742,1470951..1471115,1471601..1471712,1472298..1472570,1472872..1473143,1473723..1473899,1474067..1474138,1474530..1474644,1475637..1475839,1476042..1476206,1476535..1476705)
location: region:1458712-1476705:1
so has part: feature:1458712-1458780:1:exon
so has part: feature:1460079-1460209:1:exon
so has part: feature:1461414-1461614:1:exon
so has part: feature:1462318-1462382:1:exon
so has part: feature:1465644-1465772:1:exon
so has part: feature:1466576-1466736:1:exon
so has part: feature:1466842-1466906:1:exon
so has part: feature:1467612-1467798:1:exon
so has part: feature:1468489-1468655:1:exon
so has part: feature:1469152-1469261:1:exon
so has part: feature:1470130-1470233:1:exon
so has part: feature:1470605-1470742:1:exon
so has part: feature:1470951-1471115:1:exon
so has part: feature:1471601-1471712:1:exon
so has part: feature:1472298-1472570:1:exon
so has part: feature:1472872-1473143:1:exon
so has part: feature:1473723-1473899:1:exon
so has part: feature:1474067-1474138:1:exon
so has part: feature:1474530-1474644:1:exon
so has part: feature:1475637-1475839:1:exon
so has part: feature:1476042-1476206:1:exon
so has part: feature:1476535-1476705:1:exon

XP_012425853.3
type: Protein
SIO_000068: ncbiprotein

position:1458712:1
position: 1458712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1458712-1458780:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1460079-1460209:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1461414-1461614:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1462318-1462382:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1465644-1465772:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1466576-1466736:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1466842-1466906:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1467612-1467798:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1468489-1468655:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1469152-1469261:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1470130-1470233:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1470605-1470742:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1470951-1471115:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1471601-1471712:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1472298-1472570:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1472872-1473143:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1473723-1473899:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1474067-1474138:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1474530-1474644:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1475637-1475839:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1476042-1476206:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1476535-1476705:1:exon

LOC100225673
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC100225673
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1480731..1494090)
location: region:1480731-1494090:-1
so has part: feature:1480731-1494090:-1:exon
subclass of: SO_0000010

100225673
type: Gene
SIO_000068: ncbigene

position:1480731:-1
position: 1480731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1494090:-1
position: 1494090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1480731-1494090:-1:exon

LOC100225673
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC100225673
product: AKT interacting protein, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 ESTs, 2 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 137 samples with support for all annotated introns
transcript id: XM_030282505.3
SIO_010081: LOC100225673
subclass of: SO_0000673
so part of: LOC100225673
location: complement(join(1480731..1481653,1484198..1484258,1484813..1484920,1485135..1485233,1485305..1485393,1486588..1486688,1486772..1486836,1488307..1488512,1489766..1489881,1493989..1494090))
location: region:1480731-1494090:-1
so has part: feature:1493989-1494090:-1:exon
so has part: feature:1489766-1489881:-1:exon
so has part: feature:1488307-1488512:-1:exon
so has part: feature:1486772-1486836:-1:exon
so has part: feature:1486588-1486688:-1:exon
so has part: feature:1485305-1485393:-1:exon
so has part: feature:1485135-1485233:-1:exon
so has part: feature:1484813-1484920:-1:exon
so has part: feature:1484198-1484258:-1:exon
so has part: feature:1480731-1481653:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1493989-1494090:-1:exon

position:1493989:-1
position: 1493989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1489766-1489881:-1:exon

position:1489766:-1
position: 1489766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1489881:-1
position: 1489881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1488307-1488512:-1:exon

position:1488307:-1
position: 1488307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1488512:-1
position: 1488512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1486772-1486836:-1:exon

position:1486772:-1
position: 1486772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1486836:-1
position: 1486836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1486588-1486688:-1:exon

position:1486588:-1
position: 1486588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1486688:-1
position: 1486688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1485305-1485393:-1:exon

position:1485305:-1
position: 1485305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1485393:-1
position: 1485393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1485135-1485233:-1:exon

position:1485135:-1
position: 1485135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1485233:-1
position: 1485233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1484813-1484920:-1:exon

position:1484813:-1
position: 1484813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1484920:-1
position: 1484920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1484198-1484258:-1:exon

position:1484198:-1
position: 1484198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1484258:-1
position: 1484258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1480731-1481653:-1:exon

position:1481653:-1
position: 1481653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100225673
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC100225673
product: AKT interacting protein, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 20 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 137 samples with support for all annotated introns
transcript id: XM_030282504.3
SIO_010081: LOC100225673
subclass of: SO_0000673
so part of: LOC100225673
location: complement(join(1480731..1481656,1484198..1484258,1484813..1484920,1485135..1485233,1485305..1485393,1486588..1486688,1486772..1486836,1488307..1488512,1489766..1489881,1493989..1494090))
location: region:1480731-1494090:-1
so has part: feature:1493989-1494090:-1:exon
so has part: feature:1489766-1489881:-1:exon
so has part: feature:1488307-1488512:-1:exon
so has part: feature:1486772-1486836:-1:exon
so has part: feature:1486588-1486688:-1:exon
so has part: feature:1485305-1485393:-1:exon
so has part: feature:1485135-1485233:-1:exon
so has part: feature:1484813-1484920:-1:exon
so has part: feature:1484198-1484258:-1:exon
so has part: feature:1480731-1481656:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1493989-1494090:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1489766-1489881:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1488307-1488512:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1486772-1486836:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1486588-1486688:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1485305-1485393:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1485135-1485233:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1484813-1484920:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1484198-1484258:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1480731-1481656:-1:exon

position:1481656:-1
position: 1481656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100225673
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC100225673
product: AKT interacting protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, 1 long SRA read, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_030282503.3
SIO_010081: LOC100225673
subclass of: SO_0000673
so part of: LOC100225673
location: complement(join(1480731..1481653,1484198..1484258,1484813..1484920,1485135..1485233,1485305..1485393,1486588..1486688,1486772..1486836,1488307..1488512,1489766..1489881,1493450..1493765))
location: region:1480731-1493765:-1
so has part: feature:1493450-1493765:-1:exon
so has part: feature:1489766-1489881:-1:exon
so has part: feature:1488307-1488512:-1:exon
so has part: feature:1486772-1486836:-1:exon
so has part: feature:1486588-1486688:-1:exon
so has part: feature:1485305-1485393:-1:exon
so has part: feature:1485135-1485233:-1:exon
so has part: feature:1484813-1484920:-1:exon
so has part: feature:1484198-1484258:-1:exon
so has part: feature:1480731-1481653:-1:exon

position:1493765:-1
position: 1493765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1493450-1493765:-1:exon

position:1493450:-1
position: 1493450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1489766-1489881:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1488307-1488512:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1486772-1486836:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1486588-1486688:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1485305-1485393:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1485135-1485233:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1484813-1484920:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1484198-1484258:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1480731-1481653:-1:exon

LOC100225673
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC100225673
product: AKT interacting protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 16 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_030282501.3
SIO_010081: LOC100225673
subclass of: SO_0000673
so part of: LOC100225673
location: complement(join(1480731..1481656,1484198..1484258,1484813..1484920,1485135..1485233,1485305..1485393,1486588..1486688,1486772..1486836,1488307..1488512,1489766..1489881,1493450..1493765))
location: region:1480731-1493765:-1
so has part: feature:1493450-1493765:-1:exon
so has part: feature:1489766-1489881:-1:exon
so has part: feature:1488307-1488512:-1:exon
so has part: feature:1486772-1486836:-1:exon
so has part: feature:1486588-1486688:-1:exon
so has part: feature:1485305-1485393:-1:exon
so has part: feature:1485135-1485233:-1:exon
so has part: feature:1484813-1484920:-1:exon
so has part: feature:1484198-1484258:-1:exon
so has part: feature:1480731-1481656:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1493450-1493765:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1489766-1489881:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1488307-1488512:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1486772-1486836:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1486588-1486688:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1485305-1485393:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1485135-1485233:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1484813-1484920:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1484198-1484258:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1480731-1481656:-1:exon

LOC100225673
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC100225673
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AKT-interacting protein isoform X2
translation: MERATHLWKKSWRTGLTGYKSKGPEDAPKTLKSSSLLFGIHVMNPFWSMSTGSVRKRSDTEEKTLSGELRTSPLRASAKKQLPSIPKNAVPITKPASPASSSQSTNGTHASYGPFYLEYSLLAEFTLVVKQKLPGVYVQPSYRSALMWFGVIFIRHGLYQDGVFKFTVYIPDNYPDGDCPRLVFDLPVFHPLVDPLSGELDVKRAFAKWRRNHNHIWQVLMYARRVFYKIDTTSPLNPEAAVLYEKDVQLFKSKVVDSVKLCSSHLFDQPKIEDPYAIIFSPWNPAIHDEAREKMLTQKKPEDQHCKSMHVSGLSWVKPGSVQPFSKEEKTMPT
SIO_010081: LOC100225673
subclass of: SO_0000673
so part of: LOC100225673
location: complement(join(1481546..1481653,1484198..1484258,1484813..1484920,1485135..1485233,1485305..1485393,1486588..1486688,1486772..1486836,1488307..1488512,1489766..1489881,1493450..1493501))
location: region:1481546-1493501:-1
so has part: feature:1493450-1493501:-1:exon
so has part: feature:1489766-1489881:-1:exon
so has part: feature:1488307-1488512:-1:exon
so has part: feature:1486772-1486836:-1:exon
so has part: feature:1486588-1486688:-1:exon
so has part: feature:1485305-1485393:-1:exon
so has part: feature:1485135-1485233:-1:exon
so has part: feature:1484813-1484920:-1:exon
so has part: feature:1484198-1484258:-1:exon
so has part: feature:1481546-1481653:-1:exon

XP_030138363.3
type: Protein
SIO_000068: ncbiprotein

position:1481546:-1
position: 1481546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1493501:-1
position: 1493501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1493450-1493501:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1489766-1489881:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1488307-1488512:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1486772-1486836:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1486588-1486688:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1485305-1485393:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1485135-1485233:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1484813-1484920:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1484198-1484258:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1481546-1481653:-1:exon

LOC100225673
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC100225673
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AKT-interacting protein isoform X1
translation: MERATHLWKKSWRTGLTGYKSKGPEDAPKTLKSSSLLFGIHVMNPFWSMSTGSVRKRSDTEEKTLSGELRTSPLRASAKKQLPSIPKNAVPITKPASPASSSQSTNGTHASYGPFYLEYSLLAEFTLVVKQKLPGVYVQPSYRSALMWFGVIFIRHGLYQDGVFKFTVYIPDNYPDGDCPRLVFDLPVFHPLVDPLSGELDVKRAFAKWRRNHNHIWQVLMYARRVFYKIDTTSPLNPEAAVLYEKDVQLFKSKVVDSVKLCSSHLFDQPKIEDPYAIIFSPWNPAIHDEAREKMLTQKKKPEDQHCKSMHVSGLSWVKPGSVQPFSKEEKTMPT
SIO_010081: LOC100225673
subclass of: SO_0000673
so part of: LOC100225673
location: complement(join(1481546..1481656,1484198..1484258,1484813..1484920,1485135..1485233,1485305..1485393,1486588..1486688,1486772..1486836,1488307..1488512,1489766..1489881,1493450..1493501))
location: region:1481546-1493501:-1
so has part: feature:1493450-1493501:-1:exon
so has part: feature:1489766-1489881:-1:exon
so has part: feature:1488307-1488512:-1:exon
so has part: feature:1486772-1486836:-1:exon
so has part: feature:1486588-1486688:-1:exon
so has part: feature:1485305-1485393:-1:exon
so has part: feature:1485135-1485233:-1:exon
so has part: feature:1484813-1484920:-1:exon
so has part: feature:1484198-1484258:-1:exon
so has part: feature:1481546-1481656:-1:exon

XP_030138361.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1493450-1493501:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1489766-1489881:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1488307-1488512:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1486772-1486836:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1486588-1486688:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1485305-1485393:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1485135-1485233:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1484813-1484920:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1484198-1484258:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1481546-1481656:-1:exon

LOC100225673
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC100225673
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AKT-interacting protein isoform X4
translation: MNPFWSMSTGSVRKRSDTEEKTLSGELRTSPLRASAKKQLPSIPKNAVPITKPASPASSSQSTNGTHASYGPFYLEYSLLAEFTLVVKQKLPGVYVQPSYRSALMWFGVIFIRHGLYQDGVFKFTVYIPDNYPDGDCPRLVFDLPVFHPLVDPLSGELDVKRAFAKWRRNHNHIWQVLMYARRVFYKIDTTSPLNPEAAVLYEKDVQLFKSKVVDSVKLCSSHLFDQPKIEDPYAIIFSPWNPAIHDEAREKMLTQKKPEDQHCKSMHVSGLSWVKPGSVQPFSKEEKTMPT
SIO_010081: LOC100225673
subclass of: SO_0000673
so part of: LOC100225673
location: complement(join(1481546..1481653,1484198..1484258,1484813..1484920,1485135..1485233,1485305..1485393,1486588..1486688,1486772..1486836,1488307..1488512,1489766..1489807))
location: region:1481546-1489807:-1
so has part: feature:1489766-1489807:-1:exon
so has part: feature:1488307-1488512:-1:exon
so has part: feature:1486772-1486836:-1:exon
so has part: feature:1486588-1486688:-1:exon
so has part: feature:1485305-1485393:-1:exon
so has part: feature:1485135-1485233:-1:exon
so has part: feature:1484813-1484920:-1:exon
so has part: feature:1484198-1484258:-1:exon
so has part: feature:1481546-1481653:-1:exon

XP_030138365.1
type: Protein
SIO_000068: ncbiprotein

position:1489807:-1
position: 1489807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1489766-1489807:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1488307-1488512:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1486772-1486836:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1486588-1486688:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1485305-1485393:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1485135-1485233:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1484813-1484920:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1484198-1484258:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1481546-1481653:-1:exon

LOC100225673
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC100225673
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AKT-interacting protein isoform X3
translation: MNPFWSMSTGSVRKRSDTEEKTLSGELRTSPLRASAKKQLPSIPKNAVPITKPASPASSSQSTNGTHASYGPFYLEYSLLAEFTLVVKQKLPGVYVQPSYRSALMWFGVIFIRHGLYQDGVFKFTVYIPDNYPDGDCPRLVFDLPVFHPLVDPLSGELDVKRAFAKWRRNHNHIWQVLMYARRVFYKIDTTSPLNPEAAVLYEKDVQLFKSKVVDSVKLCSSHLFDQPKIEDPYAIIFSPWNPAIHDEAREKMLTQKKKPEDQHCKSMHVSGLSWVKPGSVQPFSKEEKTMPT
SIO_010081: LOC100225673
subclass of: SO_0000673
so part of: LOC100225673
location: complement(join(1481546..1481656,1484198..1484258,1484813..1484920,1485135..1485233,1485305..1485393,1486588..1486688,1486772..1486836,1488307..1488512,1489766..1489807))
location: region:1481546-1489807:-1
so has part: feature:1489766-1489807:-1:exon
so has part: feature:1488307-1488512:-1:exon
so has part: feature:1486772-1486836:-1:exon
so has part: feature:1486588-1486688:-1:exon
so has part: feature:1485305-1485393:-1:exon
so has part: feature:1485135-1485233:-1:exon
so has part: feature:1484813-1484920:-1:exon
so has part: feature:1484198-1484258:-1:exon
so has part: feature:1481546-1481656:-1:exon

XP_030138364.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1489766-1489807:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1488307-1488512:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1486772-1486836:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1486588-1486688:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1485305-1485393:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1485135-1485233:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1484813-1484920:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1484198-1484258:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1481546-1481656:-1:exon

LOC105758733
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC105758733
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1506321..1568618)
location: region:1506321-1568618:-1
so has part: feature:1506321-1568618:-1:exon
subclass of: SO_0000011

105758733
type: Gene
SIO_000068: ncbigene

position:1506321:-1
position: 1506321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1568618:-1
position: 1568618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1506321-1568618:-1:exon

LOC105758733
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC105758733
product: uncharacterized LOC105758733, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004369051.2
SIO_010081: LOC105758733
subclass of: SO_0000673
so part of: LOC105758733
location: complement(join(1506321..1507642,1509427..1509582,1519404..1519726,1520365..1520423,1530692..1530810,1535184..1539170,1542519..1542636,1551994..1552176,1565359..1565498,1568548..1568618))
location: region:1506321-1568618:-1
so has part: feature:1568548-1568618:-1:exon
so has part: feature:1565359-1565498:-1:exon
so has part: feature:1551994-1552176:-1:exon
so has part: feature:1542519-1542636:-1:exon
so has part: feature:1535184-1539170:-1:exon
so has part: feature:1530692-1530810:-1:exon
so has part: feature:1520365-1520423:-1:exon
so has part: feature:1519404-1519726:-1:exon
so has part: feature:1509427-1509582:-1:exon
so has part: feature:1506321-1507642:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1568548-1568618:-1:exon

position:1568548:-1
position: 1568548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1565359-1565498:-1:exon

position:1565359:-1
position: 1565359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1565498:-1
position: 1565498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1551994-1552176:-1:exon

position:1551994:-1
position: 1551994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1552176:-1
position: 1552176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1542519-1542636:-1:exon

position:1542519:-1
position: 1542519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1542636:-1
position: 1542636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1535184-1539170:-1:exon

position:1535184:-1
position: 1535184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1539170:-1
position: 1539170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1530692-1530810:-1:exon

position:1530692:-1
position: 1530692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1530810:-1
position: 1530810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1520365-1520423:-1:exon

position:1520365:-1
position: 1520365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1520423:-1
position: 1520423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1519404-1519726:-1:exon

position:1519404:-1
position: 1519404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1519726:-1
position: 1519726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1509427-1509582:-1:exon

position:1509427:-1
position: 1509427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1509582:-1
position: 1509582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1506321-1507642:-1:exon

position:1507642:-1
position: 1507642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105758733
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC105758733
product: uncharacterized LOC105758733, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_004369055.2
SIO_010081: LOC105758733
subclass of: SO_0000673
so part of: LOC105758733
location: complement(join(1506321..1507642,1509427..1509582,1519404..1519726,1520365..1520423,1530692..1530810,1535184..1539170,1542519..1542636,1551994..1552176,1560440..1560552,1561953..1561999,1562585..1562680,1565359..1565498,1568548..1568618))
location: region:1506321-1568618:-1
so has part: feature:1568548-1568618:-1:exon
so has part: feature:1565359-1565498:-1:exon
so has part: feature:1562585-1562680:-1:exon
so has part: feature:1561953-1561999:-1:exon
so has part: feature:1560440-1560552:-1:exon
so has part: feature:1551994-1552176:-1:exon
so has part: feature:1542519-1542636:-1:exon
so has part: feature:1535184-1539170:-1:exon
so has part: feature:1530692-1530810:-1:exon
so has part: feature:1520365-1520423:-1:exon
so has part: feature:1519404-1519726:-1:exon
so has part: feature:1509427-1509582:-1:exon
so has part: feature:1506321-1507642:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1568548-1568618:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1565359-1565498:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1562585-1562680:-1:exon

position:1562585:-1
position: 1562585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1562680:-1
position: 1562680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1561953-1561999:-1:exon

position:1561953:-1
position: 1561953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1561999:-1
position: 1561999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1560440-1560552:-1:exon

position:1560440:-1
position: 1560440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1560552:-1
position: 1560552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1551994-1552176:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1542519-1542636:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1535184-1539170:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1530692-1530810:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1520365-1520423:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1519404-1519726:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1509427-1509582:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1506321-1507642:-1:exon

LOC105758733
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC105758733
product: uncharacterized LOC105758733, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004369049.2
SIO_010081: LOC105758733
subclass of: SO_0000673
so part of: LOC105758733
location: complement(join(1506321..1507642,1509427..1509582,1519404..1519726,1520365..1520423,1530692..1530810,1535184..1539170,1542519..1542636,1551994..1552176,1558800..1558850,1560440..1562680,1565359..1565498,1568548..1568618))
location: region:1506321-1568618:-1
so has part: feature:1568548-1568618:-1:exon
so has part: feature:1565359-1565498:-1:exon
so has part: feature:1560440-1562680:-1:exon
so has part: feature:1558800-1558850:-1:exon
so has part: feature:1551994-1552176:-1:exon
so has part: feature:1542519-1542636:-1:exon
so has part: feature:1535184-1539170:-1:exon
so has part: feature:1530692-1530810:-1:exon
so has part: feature:1520365-1520423:-1:exon
so has part: feature:1519404-1519726:-1:exon
so has part: feature:1509427-1509582:-1:exon
so has part: feature:1506321-1507642:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1568548-1568618:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1565359-1565498:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1560440-1562680:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1558800-1558850:-1:exon

position:1558800:-1
position: 1558800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1558850:-1
position: 1558850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1551994-1552176:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1542519-1542636:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1535184-1539170:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1530692-1530810:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1520365-1520423:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1519404-1519726:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1509427-1509582:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1506321-1507642:-1:exon

LOC105758732
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC105758732
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1580147..1587089)
location: region:1580147-1587089:-1
so has part: feature:1580147-1587089:-1:exon
subclass of: SO_0000011

105758732
type: Gene
SIO_000068: ncbigene

position:1580147:-1
position: 1580147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1587089:-1
position: 1587089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1580147-1587089:-1:exon

LOC105758732
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC105758732
product: uncharacterized LOC105758732, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XR_003962394.3
SIO_010081: LOC105758732
subclass of: SO_0000673
so part of: LOC105758732
location: complement(join(1580147..1580365,1581278..1581422,1582195..1582286,1582995..1583066,1586904..1587089))
location: region:1580147-1587089:-1
so has part: feature:1586904-1587089:-1:exon
so has part: feature:1582995-1583066:-1:exon
so has part: feature:1582195-1582286:-1:exon
so has part: feature:1581278-1581422:-1:exon
so has part: feature:1580147-1580365:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1586904-1587089:-1:exon

position:1586904:-1
position: 1586904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1582995-1583066:-1:exon

position:1582995:-1
position: 1582995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1583066:-1
position: 1583066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1582195-1582286:-1:exon

position:1582195:-1
position: 1582195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1582286:-1
position: 1582286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1581278-1581422:-1:exon

position:1581278:-1
position: 1581278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1581422:-1
position: 1581422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1580147-1580365:-1:exon

position:1580365:-1
position: 1580365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105758732
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC105758732
product: uncharacterized LOC105758732, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 61 samples with support for all annotated introns
transcript id: XR_003962393.3
SIO_010081: LOC105758732
subclass of: SO_0000673
so part of: LOC105758732
location: complement(join(1580147..1580365,1581278..1581422,1582195..1582286,1582995..1583066,1586644..1586711))
location: region:1580147-1586711:-1
so has part: feature:1586644-1586711:-1:exon
so has part: feature:1582995-1583066:-1:exon
so has part: feature:1582195-1582286:-1:exon
so has part: feature:1581278-1581422:-1:exon
so has part: feature:1580147-1580365:-1:exon

position:1586711:-1
position: 1586711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1586644-1586711:-1:exon

position:1586644:-1
position: 1586644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1582995-1583066:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1582195-1582286:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1581278-1581422:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1580147-1580365:-1:exon

LOC105758732
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC105758732
product: uncharacterized LOC105758732, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 82 samples with support for all annotated introns
transcript id: XR_003962392.3
SIO_010081: LOC105758732
subclass of: SO_0000673
so part of: LOC105758732
location: complement(join(1580147..1580365,1581278..1581422,1582195..1582286,1582995..1583066,1586384..1586613))
location: region:1580147-1586613:-1
so has part: feature:1586384-1586613:-1:exon
so has part: feature:1582995-1583066:-1:exon
so has part: feature:1582195-1582286:-1:exon
so has part: feature:1581278-1581422:-1:exon
so has part: feature:1580147-1580365:-1:exon

position:1586613:-1
position: 1586613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1586384-1586613:-1:exon

position:1586384:-1
position: 1586384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1582995-1583066:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1582195-1582286:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1581278-1581422:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1580147-1580365:-1:exon

FTO
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: FTO
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1586637..1811571
location: region:1586637-1811571:1
so has part: feature:1586637-1811571:1:exon
subclass of: SO_0000010

100223734
type: Gene
SIO_000068: ncbigene

position:1586637:1
position: 1586637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1811571:1
position: 1811571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1586637-1811571:1:exon

FTO
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: FTO
product: FTO alpha-ketoglutarate dependent dioxygenase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_030282500.3
SIO_010081: FTO
subclass of: SO_0000673
so part of: FTO
location: join(1586637..1586899,1626520..1626597,1631461..1632118,1639980..1640123,1645964..1646043,1646375..1646518,1652390..1652509,1684773..1684897,1807876..1811571)
location: region:1586637-1811571:1
so has part: feature:1586637-1586899:1:exon
so has part: feature:1626520-1626597:1:exon
so has part: feature:1631461-1632118:1:exon
so has part: feature:1639980-1640123:1:exon
so has part: feature:1645964-1646043:1:exon
so has part: feature:1646375-1646518:1:exon
so has part: feature:1652390-1652509:1:exon
so has part: feature:1684773-1684897:1:exon
so has part: feature:1807876-1811571:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1586637-1586899:1:exon

position:1586899:1
position: 1586899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1626520-1626597:1:exon

position:1626520:1
position: 1626520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1626597:1
position: 1626597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1631461-1632118:1:exon

position:1631461:1
position: 1631461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1632118:1
position: 1632118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1639980-1640123:1:exon

position:1639980:1
position: 1639980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1640123:1
position: 1640123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1645964-1646043:1:exon

position:1645964:1
position: 1645964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1646043:1
position: 1646043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1646375-1646518:1:exon

position:1646375:1
position: 1646375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1646518:1
position: 1646518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1652390-1652509:1:exon

position:1652390:1
position: 1652390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1652509:1
position: 1652509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1684773-1684897:1:exon

position:1684773:1
position: 1684773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1684897:1
position: 1684897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1807876-1811571:1:exon

position:1807876:1
position: 1807876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FTO
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: FTO
product: FTO alpha-ketoglutarate dependent dioxygenase, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_032750511.2
SIO_010081: FTO
subclass of: SO_0000673
so part of: FTO
location: join(1586637..1586899,1626520..1626597,1631461..1632118,1639980..1640123,1645964..1646043,1646375..1646518,1652390..1652509,1807876..1811571)
location: region:1586637-1811571:1
so has part: feature:1586637-1586899:1:exon
so has part: feature:1626520-1626597:1:exon
so has part: feature:1631461-1632118:1:exon
so has part: feature:1639980-1640123:1:exon
so has part: feature:1645964-1646043:1:exon
so has part: feature:1646375-1646518:1:exon
so has part: feature:1652390-1652509:1:exon
so has part: feature:1807876-1811571:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1586637-1586899:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1626520-1626597:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1631461-1632118:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1639980-1640123:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1645964-1646043:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1646375-1646518:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1652390-1652509:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1807876-1811571:1:exon

FTO
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: FTO
product: FTO alpha-ketoglutarate dependent dioxygenase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041718491.1
SIO_010081: FTO
subclass of: SO_0000673
so part of: FTO
location: join(1586637..1586899,1626520..1626597,1631461..1632118,1639980..1640123,1645964..1646043,1646375..1646518,1652390..1652509,1664233..1666364)
location: region:1586637-1666364:1
so has part: feature:1586637-1586899:1:exon
so has part: feature:1626520-1626597:1:exon
so has part: feature:1631461-1632118:1:exon
so has part: feature:1639980-1640123:1:exon
so has part: feature:1645964-1646043:1:exon
so has part: feature:1646375-1646518:1:exon
so has part: feature:1652390-1652509:1:exon
so has part: feature:1664233-1666364:1:exon

position:1666364:1
position: 1666364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1586637-1586899:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1626520-1626597:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1631461-1632118:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1639980-1640123:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1645964-1646043:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1646375-1646518:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1652390-1652509:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1664233-1666364:1:exon

position:1664233:1
position: 1664233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FTO
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: FTO
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-ketoglutarate-dependent dioxygenase FTO isoform X1
translation: MKRRAGEREKELKKKKLLEELGENRLPYLTPADADFHQLWKTKYSKLIFRKSDTIPEELHQTVQESFLTLREHNCFFQDLVRIKGKDFLTPVSRILIGKPGCTYKYLNTRLFTVPWPTERYDIKYCSPQIHDACKALMRLNDYLHIETVKALQGQNLFENKEIKDTSVIDRKQNFATSHTEQGSVSKDQSSLCVPEDDKSLENRTSYNLTLLNYMDPLQMLYLKQEPYFGMGNMAVSWHHDENLVERSAVAVYSYSCEDSAVQESNEQELKGRDPAVWHVGLKVAWDIETPGLAVPLHQGDIYLMLDDLNMTHQHCVLAGLSPRFSSTHRVADSSRGTLEYILGQCELALQNLQTDSDSMALSLKSLEAAVVKQGEEIHNEVEFEWLRQFWFQGKRYLKCTDWWLKPMAKLEEFWRKLEIMTSLVLSEVRKEQQIEEQRNETISCFLLILKERQKLRKEWRARCQSDAAESLPEDQKPECHPFWTDDDECNMPLPYDLEEVIAYLQNLVQWIE
SIO_010081: FTO
subclass of: SO_0000673
so part of: FTO
location: join(1586861..1586899,1626520..1626597,1631461..1632118,1639980..1640123,1645964..1646043,1646375..1646518,1652390..1652509,1684773..1684897,1807876..1808029)
location: region:1586861-1808029:1
so has part: feature:1586861-1586899:1:exon
so has part: feature:1626520-1626597:1:exon
so has part: feature:1631461-1632118:1:exon
so has part: feature:1639980-1640123:1:exon
so has part: feature:1645964-1646043:1:exon
so has part: feature:1646375-1646518:1:exon
so has part: feature:1652390-1652509:1:exon
so has part: feature:1684773-1684897:1:exon
so has part: feature:1807876-1808029:1:exon

XP_030138360.3
type: Protein
SIO_000068: ncbiprotein

position:1586861:1
position: 1586861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1808029:1
position: 1808029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1586861-1586899:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1626520-1626597:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1631461-1632118:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1639980-1640123:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1645964-1646043:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1646375-1646518:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1652390-1652509:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1684773-1684897:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1807876-1808029:1:exon

FTO
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: FTO
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-ketoglutarate-dependent dioxygenase FTO isoform X3
translation: MKRRAGEREKELKKKKLLEELGENRLPYLTPADADFHQLWKTKYSKLIFRKSDTIPEELHQTVQESFLTLREHNCFFQDLVRIKGKDFLTPVSRILIGKPGCTYKYLNTRLFTVPWPTERYDIKYCSPQIHDACKALMRLNDYLHIETVKALQGQNLFENKEIKDTSVIDRKQNFATSHTEQGSVSKDQSSLCVPEDDKSLENRTSYNLTLLNYMDPLQMLYLKQEPYFGMGNMAVSWHHDENLVERSAVAVYSYSCEDSAVQESNEQELKGRDPAVWHVGLKVAWDIETPGLAVPLHQGDIYLMLDDLNMTHQHCVLAGLSPRFSSTHRVADSSRGTLEYILGQCELALQNLQTDSDSMALSLKSLEAAVVKQGEEIHNEVEFEWLRQFWFQGKRYLKCTDWWLKPMAKLEEFWRKLEIMMPVRRSRELARRPETRMPSLLDR
SIO_010081: FTO
subclass of: SO_0000673
so part of: FTO
location: join(1586861..1586899,1626520..1626597,1631461..1632118,1639980..1640123,1645964..1646043,1646375..1646518,1652390..1652509,1807876..1807947)
location: region:1586861-1807947:1
so has part: feature:1586861-1586899:1:exon
so has part: feature:1626520-1626597:1:exon
so has part: feature:1631461-1632118:1:exon
so has part: feature:1639980-1640123:1:exon
so has part: feature:1645964-1646043:1:exon
so has part: feature:1646375-1646518:1:exon
so has part: feature:1652390-1652509:1:exon
so has part: feature:1807876-1807947:1:exon

XP_032606402.2
type: Protein
SIO_000068: ncbiprotein

position:1807947:1
position: 1807947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1586861-1586899:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1626520-1626597:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1631461-1632118:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1639980-1640123:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1645964-1646043:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1646375-1646518:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1652390-1652509:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1807876-1807947:1:exon

FTO
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: FTO
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-ketoglutarate-dependent dioxygenase FTO isoform X2
translation: MKRRAGEREKELKKKKLLEELGENRLPYLTPADADFHQLWKTKYSKLIFRKSDTIPEELHQTVQESFLTLREHNCFFQDLVRIKGKDFLTPVSRILIGKPGCTYKYLNTRLFTVPWPTERYDIKYCSPQIHDACKALMRLNDYLHIETVKALQGQNLFENKEIKDTSVIDRKQNFATSHTEQGSVSKDQSSLCVPEDDKSLENRTSYNLTLLNYMDPLQMLYLKQEPYFGMGNMAVSWHHDENLVERSAVAVYSYSCEDSAVQESNEQELKGRDPAVWHVGLKVAWDIETPGLAVPLHQGDIYLMLDDLNMTHQHCVLAGLSPRFSSTHRVADSSRGTLEYILGQCELALQNLQTDSDSMALSLKSLEAAVVKQGEEIHNEVEFEWLRQFWFQGKRYLKCTDWWLKPMAKLEEFWRKLEIMVVSFFVLSENHFETIWGEKRSMILP
SIO_010081: FTO
subclass of: SO_0000673
so part of: FTO
location: join(1586861..1586899,1626520..1626597,1631461..1632118,1639980..1640123,1645964..1646043,1646375..1646518,1652390..1652509,1664233..1664310)
location: region:1586861-1664310:1
so has part: feature:1586861-1586899:1:exon
so has part: feature:1626520-1626597:1:exon
so has part: feature:1631461-1632118:1:exon
so has part: feature:1639980-1640123:1:exon
so has part: feature:1645964-1646043:1:exon
so has part: feature:1646375-1646518:1:exon
so has part: feature:1652390-1652509:1:exon
so has part: feature:1664233-1664310:1:exon

XP_041574425.1
type: Protein
SIO_000068: ncbiprotein

position:1664310:1
position: 1664310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1586861-1586899:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1626520-1626597:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1631461-1632118:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1639980-1640123:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1645964-1646043:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1646375-1646518:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1652390-1652509:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1664233-1664310:1:exon

IRX3
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: IRX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1917019..1921010)
location: region:1917019-1921010:-1
so has part: feature:1917019-1921010:-1:exon
subclass of: SO_0000010

115496838
type: Gene
SIO_000068: ncbigene

position:1917019:-1
position: 1917019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1921010:-1
position: 1921010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1917019-1921010:-1:exon

IRX3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: IRX3
product: iroquois homeobox 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 5 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_041718598.1
SIO_010081: IRX3
subclass of: SO_0000673
so part of: IRX3
location: complement(join(1917019..1918190,1918726..1919839,1920319..1921010))
location: region:1917019-1921010:-1
so has part: feature:1920319-1921010:-1:exon
so has part: feature:1918726-1919839:-1:exon
so has part: feature:1917019-1918190:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1920319-1921010:-1:exon

position:1920319:-1
position: 1920319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1918726-1919839:-1:exon

position:1918726:-1
position: 1918726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1919839:-1
position: 1919839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1917019-1918190:-1:exon

position:1918190:-1
position: 1918190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

IRX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: IRX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: iroquois-class homeodomain protein IRX-3
translation: MSFPQLGYQYIRPLYPAERPGSGGSRGGAELAPSGTLSNVLSSMYGAPYAAAAAAQGYGAFLPYAAELPIFPQLGAQYELKESPGVQHAAFPPHHPAFYPYGQYQFGDPSRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWAPRSRTDEEGNSYGSDHEGEEDKREDEEEIDLENIDTENIESNKDELEDDLQDADLLHSDSKTDSEGSEGFEDLPGSEERYDKASEGEPHHLRHHHLHHHHHHHHHHKCELPATAAPGGPEPLKPPLPPPPPHLSPPSSASSSAASSPTDGALAGALPKPKIWSLAETATSPDNPRKSPGGGSPPAAAPQPLPLPTPPPHRLVSSCPLGKFPNWTNRAFPAHHHHHHHPPHPLALLNTPHLLGLGAASAAPPAAAFPRPADQAQSAEPVGADRSSALEVEKKLLKTAFQPVQRR
SIO_010081: IRX3
subclass of: SO_0000673
so part of: IRX3
location: complement(join(1918120..1918190,1918726..1919839,1920319..1920540))
location: region:1918120-1920540:-1
so has part: feature:1920319-1920540:-1:exon
so has part: feature:1918726-1919839:-1:exon
so has part: feature:1918120-1918190:-1:exon

XP_041574532.1
type: Protein
SIO_000068: ncbiprotein

position:1918120:-1
position: 1918120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1920540:-1
position: 1920540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1920319-1920540:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1918726-1919839:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1918120-1918190:-1:exon

LOC121470585
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121470585
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1987883..1989123)
location: region:1987883-1989123:-1
so has part: feature:1987883-1989123:-1:exon
subclass of: SO_0000011

121470585
type: Gene
SIO_000068: ncbigene

position:1987883:-1
position: 1987883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1989123:-1
position: 1989123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1987883-1989123:-1:exon

LOC121470585
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC121470585
product: uncharacterized LOC121470585
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XR_005981652.1
SIO_010081: LOC121470585
subclass of: SO_0000673
so part of: LOC121470585
location: complement(join(1987883..1988236,1988705..1989123))
location: region:1987883-1989123:-1
so has part: feature:1988705-1989123:-1:exon
so has part: feature:1987883-1988236:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1988705-1989123:-1:exon

position:1988705:-1
position: 1988705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1987883-1988236:-1:exon

position:1988236:-1
position: 1988236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115496841
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC115496841
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2160733..2168261
location: region:2160733-2168261:1
so has part: feature:2160733-2168261:1:exon
subclass of: SO_0000011

115496841
type: Gene
SIO_000068: ncbigene

position:2160733:1
position: 2160733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2168261:1
position: 2168261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2160733-2168261:1:exon

LOC115496841
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC115496841
product: uncharacterized LOC115496841
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_003962379.3
SIO_010081: LOC115496841
subclass of: SO_0000673
so part of: LOC115496841
location: join(2160733..2160908,2164323..2164435,2167590..2167675,2167765..2167860,2168152..2168261)
location: region:2160733-2168261:1
so has part: feature:2160733-2160908:1:exon
so has part: feature:2164323-2164435:1:exon
so has part: feature:2167590-2167675:1:exon
so has part: feature:2167765-2167860:1:exon
so has part: feature:2168152-2168261:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2160733-2160908:1:exon

position:2160908:1
position: 2160908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2164323-2164435:1:exon

position:2164323:1
position: 2164323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2164435:1
position: 2164435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2167590-2167675:1:exon

position:2167590:1
position: 2167590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2167675:1
position: 2167675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2167765-2167860:1:exon

position:2167765:1
position: 2167765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2167860:1
position: 2167860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2168152-2168261:1:exon

position:2168152:1
position: 2168152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105758737
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC105758737
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2301902..2316900)
location: region:2301902-2316900:-1
so has part: feature:2301902-2316900:-1:exon
subclass of: SO_0000011

105758737
type: Gene
SIO_000068: ncbigene

position:2301902:-1
position: 2301902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2316900:-1
position: 2316900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2301902-2316900:-1:exon

LOC105758737
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC105758737
product: uncharacterized LOC105758737, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XR_003962328.3
SIO_010081: LOC105758737
subclass of: SO_0000673
so part of: LOC105758737
location: complement(join(2301902..2303219,2310422..2310553,2310760..2310923,2315346..2315473,2315944..2315999,2316089..2316241,2316603..2316900))
location: region:2301902-2316900:-1
so has part: feature:2316603-2316900:-1:exon
so has part: feature:2316089-2316241:-1:exon
so has part: feature:2315944-2315999:-1:exon
so has part: feature:2315346-2315473:-1:exon
so has part: feature:2310760-2310923:-1:exon
so has part: feature:2310422-2310553:-1:exon
so has part: feature:2301902-2303219:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2316603-2316900:-1:exon

position:2316603:-1
position: 2316603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2316089-2316241:-1:exon

position:2316089:-1
position: 2316089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2316241:-1
position: 2316241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2315944-2315999:-1:exon

position:2315944:-1
position: 2315944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2315999:-1
position: 2315999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2315346-2315473:-1:exon

position:2315346:-1
position: 2315346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2315473:-1
position: 2315473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2310760-2310923:-1:exon

position:2310760:-1
position: 2310760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2310923:-1
position: 2310923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2310422-2310553:-1:exon

position:2310422:-1
position: 2310422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2310553:-1
position: 2310553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2301902-2303219:-1:exon

position:2303219:-1
position: 2303219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105758737
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC105758737
product: uncharacterized LOC105758737, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XR_003962329.3
SIO_010081: LOC105758737
subclass of: SO_0000673
so part of: LOC105758737
location: complement(join(2301902..2303219,2310422..2310553,2310760..2310923,2315346..2315473,2315944..2315999,2316603..2316889))
location: region:2301902-2316889:-1
so has part: feature:2316603-2316889:-1:exon
so has part: feature:2315944-2315999:-1:exon
so has part: feature:2315346-2315473:-1:exon
so has part: feature:2310760-2310923:-1:exon
so has part: feature:2310422-2310553:-1:exon
so has part: feature:2301902-2303219:-1:exon

position:2316889:-1
position: 2316889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2316603-2316889:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2315944-2315999:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2315346-2315473:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2310760-2310923:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2310422-2310553:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2301902-2303219:-1:exon

LOC105758737
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC105758737
product: uncharacterized LOC105758737, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XR_004368997.2
SIO_010081: LOC105758737
subclass of: SO_0000673
so part of: LOC105758737
location: complement(join(2301902..2303219,2310422..2310553,2310760..2310923,2315330..2315473,2315944..2315999,2316089..2316394))
location: region:2301902-2316394:-1
so has part: feature:2316089-2316394:-1:exon
so has part: feature:2315944-2315999:-1:exon
so has part: feature:2315330-2315473:-1:exon
so has part: feature:2310760-2310923:-1:exon
so has part: feature:2310422-2310553:-1:exon
so has part: feature:2301902-2303219:-1:exon

position:2316394:-1
position: 2316394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2316089-2316394:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2315944-2315999:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2315330-2315473:-1:exon

position:2315330:-1
position: 2315330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2310760-2310923:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2310422-2310553:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2301902-2303219:-1:exon

LOC105758737
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC105758737
product: uncharacterized LOC105758737, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 42 samples with support for all annotated introns
transcript id: XR_003962327.3
SIO_010081: LOC105758737
subclass of: SO_0000673
so part of: LOC105758737
location: complement(join(2301902..2303219,2310422..2310553,2310760..2310923,2315346..2315473,2315944..2315999,2316089..2316374))
location: region:2301902-2316374:-1
so has part: feature:2316089-2316374:-1:exon
so has part: feature:2315944-2315999:-1:exon
so has part: feature:2315346-2315473:-1:exon
so has part: feature:2310760-2310923:-1:exon
so has part: feature:2310422-2310553:-1:exon
so has part: feature:2301902-2303219:-1:exon

position:2316374:-1
position: 2316374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2316089-2316374:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2315944-2315999:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2315346-2315473:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2310760-2310923:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2310422-2310553:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2301902-2303219:-1:exon

IRX5
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: IRX5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2318218..2322263
location: region:2318218-2322263:1
so has part: feature:2318218-2322263:1:exon
subclass of: SO_0000010

100230458
type: Gene
SIO_000068: ncbigene

position:2318218:1
position: 2318218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2322263:1
position: 2322263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2318218-2322263:1:exon

IRX5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: IRX5
product: iroquois homeobox 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_030282310.3
SIO_010081: IRX5
subclass of: SO_0000673
so part of: IRX5
location: join(2318218..2318941,2320178..2320583,2320836..2322263)
location: region:2318218-2322263:1
so has part: feature:2318218-2318941:1:exon
so has part: feature:2320178-2320583:1:exon
so has part: feature:2320836-2322263:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2318218-2318941:1:exon

position:2318941:1
position: 2318941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2320178-2320583:1:exon

position:2320178:1
position: 2320178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2320583:1
position: 2320583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2320836-2322263:1:exon

position:2320836:1
position: 2320836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

IRX5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: IRX5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: iroquois-class homeodomain protein IRX-5
translation: MSYPQGYLYQPSASLALYSCPAYSTSVISGPRTDELGRSSSGSAFSPYAGSTAFTAPSPGYNSHLQYGTDPAAAAAAAFTSYVGSPYDHTPGMAGSLGYHPYAAPLGSYPYGDPAYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWTPRNRSEDEEEEENIDLEKNDEDEPQKLEGKEDPGTPDTGAADPKAAPGCERLQESPGPREAESGLSDSDCKELAEERLDGPPVPHKAPGASPLGPCPAGRGPPPAGGEEPPPYRPPSAAAGPPHAADLHPLLPAATGASVIHSPQQAALAKPKLWSLAEIATSADKAKEAGGEAAPPGPAVLGGSGPSRSPPRPRSPAAQCPFPNGAVLPRPLYYTAPFYPGYTNYGSFGALHGHPAGGPAAAAPGAHFNGLNQTVLSRAESLAKDTKMIRSQSQVDLCKDSPYELKKGMSNI
SIO_010081: IRX5
subclass of: SO_0000673
so part of: IRX5
location: join(2318693..2318941,2320178..2320583,2320836..2321602)
location: region:2318693-2321602:1
so has part: feature:2318693-2318941:1:exon
so has part: feature:2320178-2320583:1:exon
so has part: feature:2320836-2321602:1:exon

XP_030138170.1
type: Protein
SIO_000068: ncbiprotein

position:2318693:1
position: 2318693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2321602:1
position: 2321602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2318693-2318941:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2320178-2320583:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2320836-2321602:1:exon

LOC121470591
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121470591
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2528351..2623779)
location: region:2528351-2623779:-1
so has part: feature:2528351-2623779:-1:exon
subclass of: SO_0000011

121470591
type: Gene
SIO_000068: ncbigene

position:2528351:-1
position: 2528351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2623779:-1
position: 2623779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2528351-2623779:-1:exon

LOC121470591
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC121470591
product: uncharacterized LOC121470591
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_005981666.1
SIO_010081: LOC121470591
subclass of: SO_0000673
so part of: LOC121470591
location: complement(join(2528351..2528406,2561207..2561273,2623693..2623779))
location: region:2528351-2623779:-1
so has part: feature:2623693-2623779:-1:exon
so has part: feature:2561207-2561273:-1:exon
so has part: feature:2528351-2528406:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2623693-2623779:-1:exon

position:2623693:-1
position: 2623693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2561207-2561273:-1:exon

position:2561207:-1
position: 2561207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2561273:-1
position: 2561273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2528351-2528406:-1:exon

position:2528406:-1
position: 2528406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

IRX6
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: IRX6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2653252..2659178
location: region:2653252-2659178:1
so has part: feature:2653252-2659178:1:exon
subclass of: SO_0000010

105758717
type: Gene
SIO_000068: ncbigene

position:2653252:1
position: 2653252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2659178:1
position: 2659178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2653252-2659178:1:exon

IRX6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: IRX6
product: iroquois homeobox 6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030282483.3
SIO_010081: IRX6
subclass of: SO_0000673
so part of: IRX6
location: join(2653252..2653466,2654580..2654825,2655066..2655175,2655455..2655762,2655894..2656379,2656596..2659178)
location: region:2653252-2659178:1
so has part: feature:2653252-2653466:1:exon
so has part: feature:2654580-2654825:1:exon
so has part: feature:2655066-2655175:1:exon
so has part: feature:2655455-2655762:1:exon
so has part: feature:2655894-2656379:1:exon
so has part: feature:2656596-2659178:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2653252-2653466:1:exon

position:2653466:1
position: 2653466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2654580-2654825:1:exon

position:2654580:1
position: 2654580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2654825:1
position: 2654825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2655066-2655175:1:exon

position:2655066:1
position: 2655066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2655175:1
position: 2655175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2655455-2655762:1:exon

position:2655455:1
position: 2655455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2655762:1
position: 2655762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2655894-2656379:1:exon

position:2655894:1
position: 2655894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2656379:1
position: 2656379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2656596-2659178:1:exon

position:2656596:1
position: 2656596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

IRX6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: IRX6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: iroquois-class homeodomain protein IRX-6
translation: MSFSQFGYPYSTTSQFFVPASPSTTCCEAAPRSGPDASSAPAAASLCCAPYESRLLAPGRAELNAALGMYSAPYAAGQGYGNYLPYGAEPAALYTALNPQYEIKDGAGTLHSGIAQPATYYSYDHSLGQYQYDRYGTVDFGGSARRKNATRETTSTLKTWLYEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWSPKNKAGEERKEETPREEDEYSAEGEGREQKSYKEDKDLQFSDLEEEEEEEEEEEEEAGKPEKGRTSSLQEAPSLGAALPEAPRSDCSLPGPFHAFPCAKAPSADFAPASLAGPPPPYAPAEKPRIWSLARTAGASAARRGSPEGGGAAGEQPLPAKAFRSSAFNLQPLPRSCASHRGLGEPCQFAAAGEGFGRGAKGGPGGTELGGTCLERLRTAFRPVLRR
SIO_010081: IRX6
subclass of: SO_0000673
so part of: IRX6
location: join(2653422..2653466,2654580..2654825,2655066..2655175,2655455..2655762,2655894..2656379,2656596..2656696)
location: region:2653422-2656696:1
so has part: feature:2653422-2653466:1:exon
so has part: feature:2654580-2654825:1:exon
so has part: feature:2655066-2655175:1:exon
so has part: feature:2655455-2655762:1:exon
so has part: feature:2655894-2656379:1:exon
so has part: feature:2656596-2656696:1:exon

XP_030138343.3
type: Protein
SIO_000068: ncbiprotein

position:2653422:1
position: 2653422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2656696:1
position: 2656696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2653422-2653466:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2654580-2654825:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2655066-2655175:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2655455-2655762:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2655894-2656379:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2656596-2656696:1:exon

MMP2
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: MMP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2811876..2840272
location: region:2811876-2840272:1
so has part: feature:2811876-2840272:1:exon
subclass of: SO_0000010

100228546
type: Gene
SIO_000068: ncbigene

position:2811876:1
position: 2811876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2840272:1
position: 2840272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2811876-2840272:1:exon

MMP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: MMP2
product: matrix metallopeptidase 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 40 ESTs, 9 long SRA reads, 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 53 samples with support for all annotated introns
transcript id: XM_002192669.5
SIO_010081: MMP2
subclass of: SO_0000673
so part of: MMP2
location: join(2811876..2812223,2815645..2815871,2817291..2817439,2819550..2819678,2820413..2820586,2824493..2824666,2826629..2826802,2827844..2827999,2829676..2829823,2833710..2833846,2835615..2835774,2838435..2838544,2839284..2840272)
location: region:2811876-2840272:1
so has part: feature:2811876-2812223:1:exon
so has part: feature:2815645-2815871:1:exon
so has part: feature:2817291-2817439:1:exon
so has part: feature:2819550-2819678:1:exon
so has part: feature:2820413-2820586:1:exon
so has part: feature:2824493-2824666:1:exon
so has part: feature:2826629-2826802:1:exon
so has part: feature:2827844-2827999:1:exon
so has part: feature:2829676-2829823:1:exon
so has part: feature:2833710-2833846:1:exon
so has part: feature:2835615-2835774:1:exon
so has part: feature:2838435-2838544:1:exon
so has part: feature:2839284-2840272:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2811876-2812223:1:exon

position:2812223:1
position: 2812223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2815645-2815871:1:exon

position:2815645:1
position: 2815645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2815871:1
position: 2815871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2817291-2817439:1:exon

position:2817291:1
position: 2817291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2817439:1
position: 2817439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2819550-2819678:1:exon

position:2819550:1
position: 2819550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2819678:1
position: 2819678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2820413-2820586:1:exon

position:2820413:1
position: 2820413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2820586:1
position: 2820586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2824493-2824666:1:exon

position:2824493:1
position: 2824493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2824666:1
position: 2824666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2826629-2826802:1:exon

position:2826629:1
position: 2826629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2826802:1
position: 2826802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2827844-2827999:1:exon

position:2827844:1
position: 2827844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2827999:1
position: 2827999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2829676-2829823:1:exon

position:2829676:1
position: 2829676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2829823:1
position: 2829823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2833710-2833846:1:exon

position:2833710:1
position: 2833710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2833846:1
position: 2833846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2835615-2835774:1:exon

position:2835615:1
position: 2835615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2835774:1
position: 2835774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2838435-2838544:1:exon

position:2838435:1
position: 2838435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2838544:1
position: 2838544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2839284-2840272:1:exon

position:2839284:1
position: 2839284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MMP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: MMP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 72 kDa type IV collagenase
translation: MKTHIGRGFVFKVLFIQVYLFNKTLAAPSPIIKFPGDSTPKTDKELAVQYLNKYYGCPKDNCNLFVLKDTLKKMQKFFGLPETGDLDQNTIETMKKPRCGNPDVANYNFFARKPKWEKNHITYRIIGYTPDLDPETVDDAFARAFQVWSDVTPLRFNRINDGEADIMINFGRWEHGDGYPFDGKDGLLAHAFAPGPGIGGDSHFDDDELWTLGEGQVVRVKYGNADGEYCKFPFWFNGKEYNSCTDAGRSDGFLWCSTTKDFDADGKYGFCPHESLFTMGGNGDGQPCKFPFKFQGQSYDQCTTEGRTDGYRWCGTTEDYDRDKKYGFCPETAMSTVGGNSEGAPCVFPFIFLGNKYESCTSAGRSDGKLWCASTSSYDDDRKWGFCPDQGYSLFLVAAHEFGHAMGLEHSEDPGALMAPIYTYTKNFRLSQDDIKGIQELYEVSPDVGPGPGPGPGPQPTLGPVTPELCKHEIVFDGVAQIRGETFFFKDRFMWRTINPRGKPTGPLLVATFWPDLPEKIDAVYEAPQDEKAVFFSGNEYWVYSASNLDRGYPKKLSSLGLPPDVQRVDAAFNWGRNKRTYIFAGDRYWKYNEEKKKMELASPKFIADSWNGVPDNLDAVLGLGDSGYTYFFKDQYYLQMEDKSLKIVKIGKISSDWLGC
SIO_010081: MMP2
subclass of: SO_0000673
so part of: MMP2
location: join(2812080..2812223,2815645..2815871,2817291..2817439,2819550..2819678,2820413..2820586,2824493..2824666,2826629..2826802,2827844..2827999,2829676..2829823,2833710..2833846,2835615..2835774,2838435..2838544,2839284..2839387)
location: region:2812080-2839387:1
so has part: feature:2812080-2812223:1:exon
so has part: feature:2815645-2815871:1:exon
so has part: feature:2817291-2817439:1:exon
so has part: feature:2819550-2819678:1:exon
so has part: feature:2820413-2820586:1:exon
so has part: feature:2824493-2824666:1:exon
so has part: feature:2826629-2826802:1:exon
so has part: feature:2827844-2827999:1:exon
so has part: feature:2829676-2829823:1:exon
so has part: feature:2833710-2833846:1:exon
so has part: feature:2835615-2835774:1:exon
so has part: feature:2838435-2838544:1:exon
so has part: feature:2839284-2839387:1:exon

XP_002192705.1
type: Protein
SIO_000068: ncbiprotein

position:2812080:1
position: 2812080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2839387:1
position: 2839387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2812080-2812223:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2815645-2815871:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2817291-2817439:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2819550-2819678:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2820413-2820586:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2824493-2824666:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2826629-2826802:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2827844-2827999:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2829676-2829823:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2833710-2833846:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2835615-2835774:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2838435-2838544:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2839284-2839387:1:exon

LPCAT2
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LPCAT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2864271..2894891
location: region:2864271-2894891:1
so has part: feature:2864271-2894891:1:exon
subclass of: SO_0000010

100218938
type: Gene
SIO_000068: ncbigene

position:2864271:1
position: 2864271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2894891:1
position: 2894891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2864271-2894891:1:exon

LPCAT2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LPCAT2
product: lysophosphatidylcholine acyltransferase 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 7 long SRA reads, 9 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 113 samples with support for all annotated introns
transcript id: XM_030282254.3
SIO_010081: LPCAT2
subclass of: SO_0000673
so part of: LPCAT2
location: join(2864271..2864409,2869788..2869927,2870940..2871157,2872380..2872492,2875126..2875186,2876194..2876252,2877409..2877443,2879440..2879494,2882596..2882678,2883217..2883342,2884419..2884572,2891083..2891181,2892868..2893009,2893280..2894891)
location: region:2864271-2894891:1
so has part: feature:2864271-2864409:1:exon
so has part: feature:2869788-2869927:1:exon
so has part: feature:2870940-2871157:1:exon
so has part: feature:2872380-2872492:1:exon
so has part: feature:2875126-2875186:1:exon
so has part: feature:2876194-2876252:1:exon
so has part: feature:2877409-2877443:1:exon
so has part: feature:2879440-2879494:1:exon
so has part: feature:2882596-2882678:1:exon
so has part: feature:2883217-2883342:1:exon
so has part: feature:2884419-2884572:1:exon
so has part: feature:2891083-2891181:1:exon
so has part: feature:2892868-2893009:1:exon
so has part: feature:2893280-2894891:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2864271-2864409:1:exon

position:2864409:1
position: 2864409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2869788-2869927:1:exon

position:2869788:1
position: 2869788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2869927:1
position: 2869927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2870940-2871157:1:exon

position:2870940:1
position: 2870940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2871157:1
position: 2871157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2872380-2872492:1:exon

position:2872380:1
position: 2872380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2872492:1
position: 2872492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2875126-2875186:1:exon

position:2875126:1
position: 2875126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2875186:1
position: 2875186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2876194-2876252:1:exon

position:2876194:1
position: 2876194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2876252:1
position: 2876252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2877409-2877443:1:exon

position:2877409:1
position: 2877409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2877443:1
position: 2877443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2879440-2879494:1:exon

position:2879440:1
position: 2879440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2879494:1
position: 2879494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2882596-2882678:1:exon

position:2882596:1
position: 2882596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2882678:1
position: 2882678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2883217-2883342:1:exon

position:2883217:1
position: 2883217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2883342:1
position: 2883342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2884419-2884572:1:exon

position:2884419:1
position: 2884419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2884572:1
position: 2884572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2891083-2891181:1:exon

position:2891083:1
position: 2891083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2891181:1
position: 2891181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2892868-2893009:1:exon

position:2892868:1
position: 2892868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2893009:1
position: 2893009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2893280-2894891:1:exon

position:2893280:1
position: 2893280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LPCAT2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LPCAT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysophosphatidylcholine acyltransferase 2
translation: MAVAMAPRVLPLPRQHSFNPPTVLNPFVHPGRLSAGDKLRTVLQGIILLPLRAICITFILLLAWLSASIATFCQPGRGFLPLEGWRRRMIKTTLSSLTRTAYFMMGFQVKVKGKVASLSEAPIFVAAPHSSFFDAIICALTGMPSIVSRAENLSTPIFGTILRSLQPVAVSRQDPDSRKNTVAEITRRALSKGQWPQILIFPEGTCTNRTCLITFKQGAFVPRVPVQPVLLRYPNKLDTVTWTWQGYSFKELCIMTLCQIFTRLEVEFLPVHVPTEEEKNDPVLFANRVRQTMANALNVPITDHTFEDCRLMISAGQLTLPMEAGLVEFTKISRKLNLKWNHVREQLDTFAAIASASKGGRIGIEEFAEYLKLPISDVLKELFLLFDRNGDGTIDFREYVIGLSILCNSANTEETIRMAFKLFDMDEDGTITENEFASIIQSALGLPELDVSVLFKEIDADETGKLSYEEFKNFALKHPEYASLFTTYIDLQRHQLGMFEDHDTEPLKGKHSPVRSSALVSEATPLARNKVCPEGSEEDSSSTSDKKDD
SIO_010081: LPCAT2
subclass of: SO_0000673
so part of: LPCAT2
location: join(2864290..2864409,2869788..2869927,2870940..2871157,2872380..2872492,2875126..2875186,2876194..2876252,2877409..2877443,2879440..2879494,2882596..2882678,2883217..2883342,2884419..2884572,2891083..2891181,2892868..2893009,2893280..2893524)
location: region:2864290-2893524:1
so has part: feature:2864290-2864409:1:exon
so has part: feature:2869788-2869927:1:exon
so has part: feature:2870940-2871157:1:exon
so has part: feature:2872380-2872492:1:exon
so has part: feature:2875126-2875186:1:exon
so has part: feature:2876194-2876252:1:exon
so has part: feature:2877409-2877443:1:exon
so has part: feature:2879440-2879494:1:exon
so has part: feature:2882596-2882678:1:exon
so has part: feature:2883217-2883342:1:exon
so has part: feature:2884419-2884572:1:exon
so has part: feature:2891083-2891181:1:exon
so has part: feature:2892868-2893009:1:exon
so has part: feature:2893280-2893524:1:exon

XP_030138114.2
type: Protein
SIO_000068: ncbiprotein

position:2864290:1
position: 2864290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2893524:1
position: 2893524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2864290-2864409:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2869788-2869927:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2870940-2871157:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2872380-2872492:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2875126-2875186:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2876194-2876252:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2877409-2877443:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2879440-2879494:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2882596-2882678:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2883217-2883342:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2884419-2884572:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2891083-2891181:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2892868-2893009:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2893280-2893524:1:exon

CAPNS2
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: CAPNS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2884583..2887660
location: region:2884583-2887660:1
so has part: feature:2884583-2887660:1:exon
subclass of: SO_0000010

101232965
type: Gene
SIO_000068: ncbigene

position:2884583:1
position: 2884583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2887660:1
position: 2887660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2884583-2887660:1:exon

CAPNS2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: CAPNS2
product: calpain small subunit 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030282255.3
SIO_010081: CAPNS2
subclass of: SO_0000673
so part of: CAPNS2
location: 2884583..2887660
location: region:2884583-2887660:1
so has part: feature:2884583-2887660:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2884583-2887660:1:exon

CAPNS2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: CAPNS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calpain small subunit 2
translation: MQISCVLPTPKSDTNSFRELQSTGSPSISLQKIFTMFLAKALLSGGSGSSRGGNLARGLGGLLTGGGGAGNIGGLVGGLVNLISEAAAQYNPEPPPPPRNHFTNVEAQESDEIRQFRRLFAELAGDDMEVCATELRDILNKVLSRHQDLKADGFSLDTCRSMVAVMDSDGSGKLGFEEFKYLWNNVKKWQCVYKQYDAAQSGAVGRAQLPNALRAAGFQLNEQLCQVIVRRYAAEDGSMDFNSFISCLVRLDSMFRAFKALDHDGSGHIRVTIEDWLQLTMYS
SIO_010081: CAPNS2
subclass of: SO_0000673
so part of: CAPNS2
location: 2885949..2886800
location: region:2885949-2886800:1
so has part: feature:2885949-2886800:1:exon

XP_030138115.3
type: Protein
SIO_000068: ncbiprotein

position:2885949:1
position: 2885949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2886800:1
position: 2886800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2885949-2886800:1:exon

SLC6A2
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: SLC6A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2915654..2977328
location: region:2915654-2977328:1
so has part: feature:2915654-2977328:1:exon
subclass of: SO_0000010

100231425
type: Gene
SIO_000068: ncbigene

position:2915654:1
position: 2915654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2977328:1
position: 2977328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2915654-2977328:1:exon

SLC6A2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: SLC6A2
product: solute carrier family 6 member 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 3 ESTs, 50 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_030282284.3
SIO_010081: SLC6A2
subclass of: SO_0000673
so part of: SLC6A2
location: join(2915654..2916110,2937087..2937218,2940909..2941146,2948736..2948874,2949606..2949740,2954291..2954394,2955100..2955224,2955941..2956053,2958590..2958718,2961484..2961583,2964942..2965042,2967017..2967184,2968877..2968948,2970544..2977328)
location: region:2915654-2977328:1
so has part: feature:2915654-2916110:1:exon
so has part: feature:2937087-2937218:1:exon
so has part: feature:2940909-2941146:1:exon
so has part: feature:2948736-2948874:1:exon
so has part: feature:2949606-2949740:1:exon
so has part: feature:2954291-2954394:1:exon
so has part: feature:2955100-2955224:1:exon
so has part: feature:2955941-2956053:1:exon
so has part: feature:2958590-2958718:1:exon
so has part: feature:2961484-2961583:1:exon
so has part: feature:2964942-2965042:1:exon
so has part: feature:2967017-2967184:1:exon
so has part: feature:2968877-2968948:1:exon
so has part: feature:2970544-2977328:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2915654-2916110:1:exon

position:2916110:1
position: 2916110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2937087-2937218:1:exon

position:2937087:1
position: 2937087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2937218:1
position: 2937218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2940909-2941146:1:exon

position:2940909:1
position: 2940909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2941146:1
position: 2941146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2948736-2948874:1:exon

position:2948736:1
position: 2948736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2948874:1
position: 2948874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2949606-2949740:1:exon

position:2949606:1
position: 2949606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2949740:1
position: 2949740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2954291-2954394:1:exon

position:2954291:1
position: 2954291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2954394:1
position: 2954394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2955100-2955224:1:exon

position:2955100:1
position: 2955100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2955224:1
position: 2955224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2955941-2956053:1:exon

position:2955941:1
position: 2955941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2956053:1
position: 2956053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2958590-2958718:1:exon

position:2958590:1
position: 2958590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2958718:1
position: 2958718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2961484-2961583:1:exon

position:2961484:1
position: 2961484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2961583:1
position: 2961583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2964942-2965042:1:exon

position:2964942:1
position: 2964942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2965042:1
position: 2965042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2967017-2967184:1:exon

position:2967017:1
position: 2967017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2967184:1
position: 2967184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2968877-2968948:1:exon

position:2968877:1
position: 2968877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2968948:1
position: 2968948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2970544-2977328:1:exon

position:2970544:1
position: 2970544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SLC6A2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: SLC6A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium-dependent noradrenaline transporter
translation: MALITAVPRSRRADTAGLSAESPPPTEAHFRYLRARAPSSARSLWMFKARMNKQVQPERKVSVVAPLPDRAGPPPPPKKDVELILVKEHNGVQYTSSSLLPTAPAPRGTQDRETWGKKIDFLLSVIGFAVDLANVWRFPYLCYKNGGGAFLIPYILFLIIAGMPLFYMELALGQYNREGAATVWKICPVFKGVGYAVILIALYVGFYYNVIIAWSLYYLFSSFTFELPWTNCHNSWNSPNCTDPKLFNASVLGNGTKYSKYKLTPAAEFYERGVLHLHESRGIHDLGLPRWQLALCLLVVVIILFFSLWKGVKTSGKVVWITATLPYVVLFVLLIHGITLPGAYNGINAYLHIDFRRLKEATVWIDAATQIFYSLGAGFGVLIAFASYNKFDNNCYRDALLTSTINCVTSFISGFAIFSILGYMAHEHKVKIEDVATEGAGLVFILYPEAISTLSGSTFWAVVFFIMLLTLGIDSSMGGMEAVITGLADDFHLLKQHRKLFTFGVSFGTFLLGLFCITNGGIYVLTLLDTFAAGTSILFAVLMEAIGVSWFYGVDRFSEDIQQMMGFKPGLYWRLCWKFVSPAFLLFVVIVSIINFKPLTYDDYTFPPWANRIGWGIALSSMILVPAYIIYKFMNVRGTFKERLAYCITPENEHQLVAQGNVRQFKLQHWLAI
SIO_010081: SLC6A2
subclass of: SO_0000673
so part of: SLC6A2
location: join(2915669..2916110,2937087..2937218,2940909..2941146,2948736..2948874,2949606..2949740,2954291..2954394,2955100..2955224,2955941..2956053,2958590..2958718,2961484..2961583,2964942..2965042,2967017..2967184,2968877..2968948,2970544..2970567)
location: region:2915669-2970567:1
so has part: feature:2915669-2916110:1:exon
so has part: feature:2937087-2937218:1:exon
so has part: feature:2940909-2941146:1:exon
so has part: feature:2948736-2948874:1:exon
so has part: feature:2949606-2949740:1:exon
so has part: feature:2954291-2954394:1:exon
so has part: feature:2955100-2955224:1:exon
so has part: feature:2955941-2956053:1:exon
so has part: feature:2958590-2958718:1:exon
so has part: feature:2961484-2961583:1:exon
so has part: feature:2964942-2965042:1:exon
so has part: feature:2967017-2967184:1:exon
so has part: feature:2968877-2968948:1:exon
so has part: feature:2970544-2970567:1:exon

XP_030138144.3
type: Protein
SIO_000068: ncbiprotein

position:2915669:1
position: 2915669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2970567:1
position: 2970567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2915669-2916110:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2937087-2937218:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2940909-2941146:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2948736-2948874:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2949606-2949740:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2954291-2954394:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2955100-2955224:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2955941-2956053:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2958590-2958718:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2961484-2961583:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2964942-2965042:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2967017-2967184:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2968877-2968948:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2970544-2970567:1:exon

SLC12A4
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: SLC12A4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3004678..3050880)
location: region:3004678-3050880:-1
so has part: feature:3004678-3050880:-1:exon
subclass of: SO_0000010

100230397
type: Gene
SIO_000068: ncbigene

position:3004678:-1
position: 3004678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3050880:-1
position: 3050880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3004678-3050880:-1:exon

SLC12A4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: SLC12A4
product: solute carrier family 12 member 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 ESTs, 6 long SRA reads, 32 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 95 samples with support for all annotated introns
transcript id: XM_030282722.3
SIO_010081: SLC12A4
subclass of: SO_0000673
so part of: SLC12A4
location: complement(join(3004678..3005835,3006145..3006278,3008949..3009133,3009796..3009903,3010000..3010131,3010304..3010473,3011156..3011351,3012844..3013012,3013958..3014062,3014811..3014930,3015246..3015344,3015823..3015941,3016320..3016494,3017096..3017153,3018777..3018875,3018955..3019119,3020014..3020228,3022060..3022301,3022739..3022869,3023202..3023256,3023833..3023979,3029677..3029808,3031100..3031194,3050592..3050880))
location: region:3004678-3050880:-1
so has part: feature:3050592-3050880:-1:exon
so has part: feature:3031100-3031194:-1:exon
so has part: feature:3029677-3029808:-1:exon
so has part: feature:3023833-3023979:-1:exon
so has part: feature:3023202-3023256:-1:exon
so has part: feature:3022739-3022869:-1:exon
so has part: feature:3022060-3022301:-1:exon
so has part: feature:3020014-3020228:-1:exon
so has part: feature:3018955-3019119:-1:exon
so has part: feature:3018777-3018875:-1:exon
so has part: feature:3017096-3017153:-1:exon
so has part: feature:3016320-3016494:-1:exon
so has part: feature:3015823-3015941:-1:exon
so has part: feature:3015246-3015344:-1:exon
so has part: feature:3014811-3014930:-1:exon
so has part: feature:3013958-3014062:-1:exon
so has part: feature:3012844-3013012:-1:exon
so has part: feature:3011156-3011351:-1:exon
so has part: feature:3010304-3010473:-1:exon
so has part: feature:3010000-3010131:-1:exon
so has part: feature:3009796-3009903:-1:exon
so has part: feature:3008949-3009133:-1:exon
so has part: feature:3006145-3006278:-1:exon
so has part: feature:3004678-3005835:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3050592-3050880:-1:exon

position:3050592:-1
position: 3050592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3031100-3031194:-1:exon

position:3031100:-1
position: 3031100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3031194:-1
position: 3031194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3029677-3029808:-1:exon

position:3029677:-1
position: 3029677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3029808:-1
position: 3029808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3023833-3023979:-1:exon

position:3023833:-1
position: 3023833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3023979:-1
position: 3023979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3023202-3023256:-1:exon

position:3023202:-1
position: 3023202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3023256:-1
position: 3023256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3022739-3022869:-1:exon

position:3022739:-1
position: 3022739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3022869:-1
position: 3022869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3022060-3022301:-1:exon

position:3022060:-1
position: 3022060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3022301:-1
position: 3022301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3020014-3020228:-1:exon

position:3020014:-1
position: 3020014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3020228:-1
position: 3020228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3018955-3019119:-1:exon

position:3018955:-1
position: 3018955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3019119:-1
position: 3019119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3018777-3018875:-1:exon

position:3018777:-1
position: 3018777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3018875:-1
position: 3018875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3017096-3017153:-1:exon

position:3017096:-1
position: 3017096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3017153:-1
position: 3017153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3016320-3016494:-1:exon

position:3016320:-1
position: 3016320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3016494:-1
position: 3016494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3015823-3015941:-1:exon

position:3015823:-1
position: 3015823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3015941:-1
position: 3015941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3015246-3015344:-1:exon

position:3015246:-1
position: 3015246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3015344:-1
position: 3015344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3014811-3014930:-1:exon

position:3014811:-1
position: 3014811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3014930:-1
position: 3014930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3013958-3014062:-1:exon

position:3013958:-1
position: 3013958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3014062:-1
position: 3014062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3012844-3013012:-1:exon

position:3012844:-1
position: 3012844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3013012:-1
position: 3013012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3011156-3011351:-1:exon

position:3011156:-1
position: 3011156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3011351:-1
position: 3011351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:3010304-3010473:-1:exon

position:3010304:-1
position: 3010304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3010473:-1
position: 3010473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:3010000-3010131:-1:exon

position:3010000:-1
position: 3010000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3010131:-1
position: 3010131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:3009796-3009903:-1:exon

position:3009796:-1
position: 3009796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3009903:-1
position: 3009903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:3008949-3009133:-1:exon

position:3008949:-1
position: 3008949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3009133:-1
position: 3009133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:3006145-3006278:-1:exon

position:3006145:-1
position: 3006145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3006278:-1
position: 3006278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:3004678-3005835:-1:exon

position:3005835:-1
position: 3005835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC12A4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: SLC12A4
product: solute carrier family 12 member 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 77 samples with support for all annotated introns
transcript id: XM_030282721.3
SIO_010081: SLC12A4
subclass of: SO_0000673
so part of: SLC12A4
location: complement(join(3004678..3005835,3006145..3006278,3008193..3008207,3008949..3009133,3009796..3009903,3010000..3010131,3010304..3010473,3011156..3011351,3012844..3013012,3013958..3014062,3014811..3014930,3015246..3015344,3015823..3015941,3016320..3016494,3017096..3017153,3018777..3018875,3018955..3019119,3020014..3020228,3022060..3022301,3022739..3022869,3023202..3023256,3023833..3023979,3029677..3029808,3031100..3031194,3050592..3050880))
location: region:3004678-3050880:-1
so has part: feature:3050592-3050880:-1:exon
so has part: feature:3031100-3031194:-1:exon
so has part: feature:3029677-3029808:-1:exon
so has part: feature:3023833-3023979:-1:exon
so has part: feature:3023202-3023256:-1:exon
so has part: feature:3022739-3022869:-1:exon
so has part: feature:3022060-3022301:-1:exon
so has part: feature:3020014-3020228:-1:exon
so has part: feature:3018955-3019119:-1:exon
so has part: feature:3018777-3018875:-1:exon
so has part: feature:3017096-3017153:-1:exon
so has part: feature:3016320-3016494:-1:exon
so has part: feature:3015823-3015941:-1:exon
so has part: feature:3015246-3015344:-1:exon
so has part: feature:3014811-3014930:-1:exon
so has part: feature:3013958-3014062:-1:exon
so has part: feature:3012844-3013012:-1:exon
so has part: feature:3011156-3011351:-1:exon
so has part: feature:3010304-3010473:-1:exon
so has part: feature:3010000-3010131:-1:exon
so has part: feature:3009796-3009903:-1:exon
so has part: feature:3008949-3009133:-1:exon
so has part: feature:3008193-3008207:-1:exon
so has part: feature:3006145-3006278:-1:exon
so has part: feature:3004678-3005835:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3050592-3050880:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3031100-3031194:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3029677-3029808:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3023833-3023979:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3023202-3023256:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3022739-3022869:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3022060-3022301:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3020014-3020228:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3018955-3019119:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3018777-3018875:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3017096-3017153:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3016320-3016494:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3015823-3015941:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3015246-3015344:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3014811-3014930:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3013958-3014062:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3012844-3013012:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3011156-3011351:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3010304-3010473:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3010000-3010131:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3009796-3009903:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3008949-3009133:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3008193-3008207:-1:exon

position:3008193:-1
position: 3008193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3008207:-1
position: 3008207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:3006145-3006278:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3004678-3005835:-1:exon

SLC12A4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: SLC12A4
product: solute carrier family 12 member 4, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_012570359.4
SIO_010081: SLC12A4
subclass of: SO_0000673
so part of: SLC12A4
location: complement(join(3004678..3005835,3006145..3006278,3008193..3008207,3008949..3009133,3009796..3009903,3010000..3010131,3010304..3010473,3011156..3011351,3012844..3013012,3013958..3014062,3014811..3014930,3015246..3015344,3015823..3015941,3016320..3016494,3017096..3017153,3018777..3018875,3018955..3019119,3020014..3020228,3022060..3022301,3022739..3022869,3023202..3023256,3023833..3023979,3029677..3029808,3031100..3031194,3049893..3050069))
location: region:3004678-3050069:-1
so has part: feature:3049893-3050069:-1:exon
so has part: feature:3031100-3031194:-1:exon
so has part: feature:3029677-3029808:-1:exon
so has part: feature:3023833-3023979:-1:exon
so has part: feature:3023202-3023256:-1:exon
so has part: feature:3022739-3022869:-1:exon
so has part: feature:3022060-3022301:-1:exon
so has part: feature:3020014-3020228:-1:exon
so has part: feature:3018955-3019119:-1:exon
so has part: feature:3018777-3018875:-1:exon
so has part: feature:3017096-3017153:-1:exon
so has part: feature:3016320-3016494:-1:exon
so has part: feature:3015823-3015941:-1:exon
so has part: feature:3015246-3015344:-1:exon
so has part: feature:3014811-3014930:-1:exon
so has part: feature:3013958-3014062:-1:exon
so has part: feature:3012844-3013012:-1:exon
so has part: feature:3011156-3011351:-1:exon
so has part: feature:3010304-3010473:-1:exon
so has part: feature:3010000-3010131:-1:exon
so has part: feature:3009796-3009903:-1:exon
so has part: feature:3008949-3009133:-1:exon
so has part: feature:3008193-3008207:-1:exon
so has part: feature:3006145-3006278:-1:exon
so has part: feature:3004678-3005835:-1:exon

position:3050069:-1
position: 3050069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3049893-3050069:-1:exon

position:3049893:-1
position: 3049893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3031100-3031194:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3029677-3029808:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3023833-3023979:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3023202-3023256:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3022739-3022869:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3022060-3022301:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3020014-3020228:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3018955-3019119:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3018777-3018875:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3017096-3017153:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3016320-3016494:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3015823-3015941:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3015246-3015344:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3014811-3014930:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3013958-3014062:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3012844-3013012:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3011156-3011351:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3010304-3010473:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3010000-3010131:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3009796-3009903:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3008949-3009133:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3008193-3008207:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3006145-3006278:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3004678-3005835:-1:exon

SLC12A4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: SLC12A4
product: solute carrier family 12 member 4, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_030282724.3
SIO_010081: SLC12A4
subclass of: SO_0000673
so part of: SLC12A4
location: complement(join(3004678..3005835,3006145..3006278,3008193..3008207,3008949..3009133,3009796..3009903,3010000..3010131,3010304..3010473,3011156..3011351,3012844..3013012,3013958..3014062,3014811..3014930,3015246..3015344,3015823..3015941,3016320..3016494,3017096..3017153,3018777..3018875,3018955..3019119,3020014..3020228,3022060..3022301,3022739..3022869,3023202..3023256,3023833..3023979,3029677..3029808,3031100..3031194,3039151..3039251,3040482..3040577))
location: region:3004678-3040577:-1
so has part: feature:3040482-3040577:-1:exon
so has part: feature:3039151-3039251:-1:exon
so has part: feature:3031100-3031194:-1:exon
so has part: feature:3029677-3029808:-1:exon
so has part: feature:3023833-3023979:-1:exon
so has part: feature:3023202-3023256:-1:exon
so has part: feature:3022739-3022869:-1:exon
so has part: feature:3022060-3022301:-1:exon
so has part: feature:3020014-3020228:-1:exon
so has part: feature:3018955-3019119:-1:exon
so has part: feature:3018777-3018875:-1:exon
so has part: feature:3017096-3017153:-1:exon
so has part: feature:3016320-3016494:-1:exon
so has part: feature:3015823-3015941:-1:exon
so has part: feature:3015246-3015344:-1:exon
so has part: feature:3014811-3014930:-1:exon
so has part: feature:3013958-3014062:-1:exon
so has part: feature:3012844-3013012:-1:exon
so has part: feature:3011156-3011351:-1:exon
so has part: feature:3010304-3010473:-1:exon
so has part: feature:3010000-3010131:-1:exon
so has part: feature:3009796-3009903:-1:exon
so has part: feature:3008949-3009133:-1:exon
so has part: feature:3008193-3008207:-1:exon
so has part: feature:3006145-3006278:-1:exon
so has part: feature:3004678-3005835:-1:exon

position:3040577:-1
position: 3040577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3040482-3040577:-1:exon

position:3040482:-1
position: 3040482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3039151-3039251:-1:exon

position:3039151:-1
position: 3039151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3039251:-1
position: 3039251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3031100-3031194:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3029677-3029808:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3023833-3023979:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3023202-3023256:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3022739-3022869:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3022060-3022301:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3020014-3020228:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3018955-3019119:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3018777-3018875:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3017096-3017153:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3016320-3016494:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3015823-3015941:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3015246-3015344:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3014811-3014930:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3013958-3014062:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3012844-3013012:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3011156-3011351:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3010304-3010473:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3010000-3010131:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3009796-3009903:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3008949-3009133:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3008193-3008207:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3006145-3006278:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3004678-3005835:-1:exon

SLC12A4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: SLC12A4
product: solute carrier family 12 member 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_012570351.4
SIO_010081: SLC12A4
subclass of: SO_0000673
so part of: SLC12A4
location: complement(join(3004678..3005835,3006145..3006278,3008193..3008207,3008949..3009133,3009796..3009903,3010000..3010131,3010304..3010473,3011156..3011351,3012844..3013012,3013958..3014062,3014811..3014930,3015246..3015344,3015823..3015941,3016320..3016494,3017096..3017153,3018777..3018875,3018955..3019119,3020014..3020228,3022060..3022301,3022739..3022869,3023202..3023256,3023833..3023979,3029677..3029808,3031100..3031194,3034541..3034818,3039151..3039235))
location: region:3004678-3039235:-1
so has part: feature:3039151-3039235:-1:exon
so has part: feature:3034541-3034818:-1:exon
so has part: feature:3031100-3031194:-1:exon
so has part: feature:3029677-3029808:-1:exon
so has part: feature:3023833-3023979:-1:exon
so has part: feature:3023202-3023256:-1:exon
so has part: feature:3022739-3022869:-1:exon
so has part: feature:3022060-3022301:-1:exon
so has part: feature:3020014-3020228:-1:exon
so has part: feature:3018955-3019119:-1:exon
so has part: feature:3018777-3018875:-1:exon
so has part: feature:3017096-3017153:-1:exon
so has part: feature:3016320-3016494:-1:exon
so has part: feature:3015823-3015941:-1:exon
so has part: feature:3015246-3015344:-1:exon
so has part: feature:3014811-3014930:-1:exon
so has part: feature:3013958-3014062:-1:exon
so has part: feature:3012844-3013012:-1:exon
so has part: feature:3011156-3011351:-1:exon
so has part: feature:3010304-3010473:-1:exon
so has part: feature:3010000-3010131:-1:exon
so has part: feature:3009796-3009903:-1:exon
so has part: feature:3008949-3009133:-1:exon
so has part: feature:3008193-3008207:-1:exon
so has part: feature:3006145-3006278:-1:exon
so has part: feature:3004678-3005835:-1:exon

position:3039235:-1
position: 3039235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3039151-3039235:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3034541-3034818:-1:exon

position:3034541:-1
position: 3034541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3034818:-1
position: 3034818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3031100-3031194:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3029677-3029808:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3023833-3023979:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3023202-3023256:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3022739-3022869:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3022060-3022301:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3020014-3020228:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3018955-3019119:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3018777-3018875:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3017096-3017153:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3016320-3016494:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3015823-3015941:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3015246-3015344:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3014811-3014930:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3013958-3014062:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3012844-3013012:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3011156-3011351:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3010304-3010473:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3010000-3010131:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3009796-3009903:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3008949-3009133:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3008193-3008207:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3006145-3006278:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3004678-3005835:-1:exon

SLC12A4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: SLC12A4
product: solute carrier family 12 member 4, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 ESTs, 2 long SRA reads, 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_004174991.5
SIO_010081: SLC12A4
subclass of: SO_0000673
so part of: SLC12A4
location: complement(join(3004678..3005835,3006145..3006278,3008949..3009133,3009796..3009903,3010000..3010131,3010304..3010473,3011156..3011351,3012844..3013012,3013958..3014062,3014811..3014930,3015246..3015344,3015823..3015941,3016320..3016494,3017096..3017153,3018777..3018875,3018955..3019119,3020014..3020228,3022060..3022301,3022739..3022869,3023202..3023256,3023833..3023979,3029677..3029808,3031100..3031194,3034541..3034818,3039151..3039234))
location: region:3004678-3039234:-1
so has part: feature:3039151-3039234:-1:exon
so has part: feature:3034541-3034818:-1:exon
so has part: feature:3031100-3031194:-1:exon
so has part: feature:3029677-3029808:-1:exon
so has part: feature:3023833-3023979:-1:exon
so has part: feature:3023202-3023256:-1:exon
so has part: feature:3022739-3022869:-1:exon
so has part: feature:3022060-3022301:-1:exon
so has part: feature:3020014-3020228:-1:exon
so has part: feature:3018955-3019119:-1:exon
so has part: feature:3018777-3018875:-1:exon
so has part: feature:3017096-3017153:-1:exon
so has part: feature:3016320-3016494:-1:exon
so has part: feature:3015823-3015941:-1:exon
so has part: feature:3015246-3015344:-1:exon
so has part: feature:3014811-3014930:-1:exon
so has part: feature:3013958-3014062:-1:exon
so has part: feature:3012844-3013012:-1:exon
so has part: feature:3011156-3011351:-1:exon
so has part: feature:3010304-3010473:-1:exon
so has part: feature:3010000-3010131:-1:exon
so has part: feature:3009796-3009903:-1:exon
so has part: feature:3008949-3009133:-1:exon
so has part: feature:3006145-3006278:-1:exon
so has part: feature:3004678-3005835:-1:exon

position:3039234:-1
position: 3039234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3039151-3039234:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3034541-3034818:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3031100-3031194:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3029677-3029808:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3023833-3023979:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3023202-3023256:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3022739-3022869:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3022060-3022301:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3020014-3020228:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3018955-3019119:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3018777-3018875:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3017096-3017153:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3016320-3016494:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3015823-3015941:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3015246-3015344:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3014811-3014930:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3013958-3014062:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3012844-3013012:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3011156-3011351:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3010304-3010473:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3010000-3010131:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3009796-3009903:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3008949-3009133:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3006145-3006278:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3004678-3005835:-1:exon

SLC12A4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: SLC12A4
product: solute carrier family 12 member 4, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_041718526.1
SIO_010081: SLC12A4
subclass of: SO_0000673
so part of: SLC12A4
location: complement(join(3004678..3005835,3006145..3006278,3008193..3008207,3008949..3009133,3009796..3009903,3010000..3010131,3010304..3010473,3011156..3011351,3012844..3013012,3013958..3014062,3014811..3014930,3015246..3015344,3015823..3015941,3016320..3016494,3017096..3017153,3018777..3018875,3018955..3019119,3020014..3020228,3022060..3022301,3022739..3022869,3023202..3023256,3023833..3023979,3029677..3029808,3031100..3031194,3034541..3034821))
location: region:3004678-3034821:-1
so has part: feature:3034541-3034821:-1:exon
so has part: feature:3031100-3031194:-1:exon
so has part: feature:3029677-3029808:-1:exon
so has part: feature:3023833-3023979:-1:exon
so has part: feature:3023202-3023256:-1:exon
so has part: feature:3022739-3022869:-1:exon
so has part: feature:3022060-3022301:-1:exon
so has part: feature:3020014-3020228:-1:exon
so has part: feature:3018955-3019119:-1:exon
so has part: feature:3018777-3018875:-1:exon
so has part: feature:3017096-3017153:-1:exon
so has part: feature:3016320-3016494:-1:exon
so has part: feature:3015823-3015941:-1:exon
so has part: feature:3015246-3015344:-1:exon
so has part: feature:3014811-3014930:-1:exon
so has part: feature:3013958-3014062:-1:exon
so has part: feature:3012844-3013012:-1:exon
so has part: feature:3011156-3011351:-1:exon
so has part: feature:3010304-3010473:-1:exon
so has part: feature:3010000-3010131:-1:exon
so has part: feature:3009796-3009903:-1:exon
so has part: feature:3008949-3009133:-1:exon
so has part: feature:3008193-3008207:-1:exon
so has part: feature:3006145-3006278:-1:exon
so has part: feature:3004678-3005835:-1:exon

position:3034821:-1
position: 3034821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3034541-3034821:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3031100-3031194:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3029677-3029808:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3023833-3023979:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3023202-3023256:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3022739-3022869:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3022060-3022301:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3020014-3020228:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3018955-3019119:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3018777-3018875:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3017096-3017153:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3016320-3016494:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3015823-3015941:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3015246-3015344:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3014811-3014930:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3013958-3014062:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3012844-3013012:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3011156-3011351:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3010304-3010473:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3010000-3010131:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3009796-3009903:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3008949-3009133:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3008193-3008207:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3006145-3006278:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3004678-3005835:-1:exon

SLC12A4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: SLC12A4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 12 member 4 isoform X2
translation: MGGVEERGFLRGSDRTGQECAAGSAPRPACLAAVPRGALSAPPAMPHFTVVPVEDKPRAEYDSVEGLSWVDYREPAAAPAPGDSYDTVSSDGHGNHKENSPFLNSSEASKGGDYYDRNLALFEEELDIRPKVSSLLGKLVNYTNLTQGVKEHEEAENTDGSKKKVSKSPSMGTLMGVYLPCMQNIFGVILFLRLTWMVGMAGVLQSFLIVLLCCCCTMLTTISMSAIATNGVVPAGGSYFMISRSLGPEFGGAVGLCFYLGTTFAGAMYILGAIEILLTYIVPQAAIFHPSGAHDASSAMLNNMRVYGTVFLILMAVVVFVGVKYVNKFASLFLACVVISILSIYAGAIKSIFDPPEFPICMLGNRTLSRDQFDVCAKTVVKDNMTVASKLWELFCHSTNLTTEHCDEYFLMNNVSEIAGIPGAASGILIDNLWSNYLEKGEILERAHQPSVDVAGQKNNLHLYVLSDITTSFMVLVGIFFPSVTGIMAGSNRSGDLKDAQKSIPVGTILAIVTTSLVYFSCVLLFGACIEGVVLRDKFGDAVNKNLVVGTLSWPSPWVIVIGSFFSTCGAGLQSLTGAPRLLQAIAKDNIIPFLWIFGHGKANGEPTWALLLTALIAELGILIASLDMVAPILSMFFLMCYLFVNLACAVQTLLRTPNWRPRFKYYHWALSFLGMSICLALMFISSWYYALVAMLIAGMIYKYIEYQGAEKEWGDGIRGLSLSAARYALLRLEEGPPHTKNWRPQLLVLLKLDEDLHVKYPRLLTFASQLKAGKGLTIIGSVIQGNFLETYGEAQAAEQTIKNMMEIEKVKGFCQVVVANKVREGIAHLIQSCGLGGMKHNTVVLGWPYGWRQSEDPRSWKTFIGTVRCTTAAHLALLVPKNVSFYPSNHERYNEGNIDVWWIVHDGGMLMLLPFLLKQHKVWRKCKMRIFTVAQMDDNSIQMKKDLATFLYQLRIEAEVEVVEMHNSDISAYTYERTLMMEQRSQMLRQMRLTKTEREREAQLVKDRHSIARLESLYSDEEDEADPVPENIQMTWTKEKCDAEKRNRGSAVGSFRDLITIKPNQSNVRRMHTAVKLNEVIVNRSHDARLVLLNMPGPPKNTDGDENYMEFLEVLTEGLERVLLVRGGGREVITIYS
SIO_010081: SLC12A4
subclass of: SO_0000673
so part of: SLC12A4
location: complement(join(3005744..3005835,3006145..3006278,3008949..3009133,3009796..3009903,3010000..3010131,3010304..3010473,3011156..3011351,3012844..3013012,3013958..3014062,3014811..3014930,3015246..3015344,3015823..3015941,3016320..3016494,3017096..3017153,3018777..3018875,3018955..3019119,3020014..3020228,3022060..3022301,3022739..3022869,3023202..3023256,3023833..3023979,3029677..3029808,3031100..3031194,3050592..3050865))
location: region:3005744-3050865:-1
so has part: feature:3050592-3050865:-1:exon
so has part: feature:3031100-3031194:-1:exon
so has part: feature:3029677-3029808:-1:exon
so has part: feature:3023833-3023979:-1:exon
so has part: feature:3023202-3023256:-1:exon
so has part: feature:3022739-3022869:-1:exon
so has part: feature:3022060-3022301:-1:exon
so has part: feature:3020014-3020228:-1:exon
so has part: feature:3018955-3019119:-1:exon
so has part: feature:3018777-3018875:-1:exon
so has part: feature:3017096-3017153:-1:exon
so has part: feature:3016320-3016494:-1:exon
so has part: feature:3015823-3015941:-1:exon
so has part: feature:3015246-3015344:-1:exon
so has part: feature:3014811-3014930:-1:exon
so has part: feature:3013958-3014062:-1:exon
so has part: feature:3012844-3013012:-1:exon
so has part: feature:3011156-3011351:-1:exon
so has part: feature:3010304-3010473:-1:exon
so has part: feature:3010000-3010131:-1:exon
so has part: feature:3009796-3009903:-1:exon
so has part: feature:3008949-3009133:-1:exon
so has part: feature:3006145-3006278:-1:exon
so has part: feature:3005744-3005835:-1:exon

XP_030138582.2
type: Protein
SIO_000068: ncbiprotein

position:3005744:-1
position: 3005744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3050865:-1
position: 3050865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3050592-3050865:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3031100-3031194:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3029677-3029808:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3023833-3023979:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3023202-3023256:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3022739-3022869:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3022060-3022301:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3020014-3020228:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3018955-3019119:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3018777-3018875:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3017096-3017153:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3016320-3016494:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3015823-3015941:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3015246-3015344:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3014811-3014930:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3013958-3014062:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3012844-3013012:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3011156-3011351:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3010304-3010473:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3010000-3010131:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3009796-3009903:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3008949-3009133:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3006145-3006278:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3005744-3005835:-1:exon

SLC12A4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: SLC12A4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 12 member 4 isoform X1
translation: MGGVEERGFLRGSDRTGQECAAGSAPRPACLAAVPRGALSAPPAMPHFTVVPVEDKPRAEYDSVEGLSWVDYREPAAAPAPGDSYDTVSSDGHGNHKENSPFLNSSEASKGGDYYDRNLALFEEELDIRPKVSSLLGKLVNYTNLTQGVKEHEEAENTDGSKKKVSKSPSMGTLMGVYLPCMQNIFGVILFLRLTWMVGMAGVLQSFLIVLLCCCCTMLTTISMSAIATNGVVPAGGSYFMISRSLGPEFGGAVGLCFYLGTTFAGAMYILGAIEILLTYIVPQAAIFHPSGAHDASSAMLNNMRVYGTVFLILMAVVVFVGVKYVNKFASLFLACVVISILSIYAGAIKSIFDPPEFPICMLGNRTLSRDQFDVCAKTVVKDNMTVASKLWELFCHSTNLTTEHCDEYFLMNNVSEIAGIPGAASGILIDNLWSNYLEKGEILERAHQPSVDVAGQKNNLHLYVLSDITTSFMVLVGIFFPSVTGIMAGSNRSGDLKDAQKSIPVGTILAIVTTSLVYFSCVLLFGACIEGVVLRDKFGDAVNKNLVVGTLSWPSPWVIVIGSFFSTCGAGLQSLTGAPRLLQAIAKDNIIPFLWIFGHGKANGEPTWALLLTALIAELGILIASLDMVAPILSMFFLMCYLFVNLACAVQTLLRTPNWRPRFKYYHWALSFLGMSICLALMFISSWYYALVAMLIAGMIYKYIEYQGAEKEWGDGIRGLSLSAARYALLRLEEGPPHTKNWRPQLLVLLKLDEDLHVKYPRLLTFASQLKAGKGLTIIGSVIQGNFLETYGEAQAAEQTIKNMMEIEKVKGFCQVVVANKVREGIAHLIQSCGLGGMKHNTVVLGWPYGWRQSEDPRSWKTFIGTVRCTTAAHLALLVPKNVSFYPSNHERYNEGNIDVWWIVHDGGMLMLLPFLLKQHKVWRKCKMRIFTVAQMDDNSIQMKKDLATFLYQLRIEAEVEVVEMHNSDISAYTYERTLMMEQRSQMLRQMRLTKTEREREAQLVKDRHSIARLESLYSDEEDEADPVPENIQMTWTKEKCDAEKRNRGSAVGSFRDLITIKPGWENLNQSNVRRMHTAVKLNEVIVNRSHDARLVLLNMPGPPKNTDGDENYMEFLEVLTEGLERVLLVRGGGREVITIYS
SIO_010081: SLC12A4
subclass of: SO_0000673
so part of: SLC12A4
location: complement(join(3005744..3005835,3006145..3006278,3008193..3008207,3008949..3009133,3009796..3009903,3010000..3010131,3010304..3010473,3011156..3011351,3012844..3013012,3013958..3014062,3014811..3014930,3015246..3015344,3015823..3015941,3016320..3016494,3017096..3017153,3018777..3018875,3018955..3019119,3020014..3020228,3022060..3022301,3022739..3022869,3023202..3023256,3023833..3023979,3029677..3029808,3031100..3031194,3050592..3050865))
location: region:3005744-3050865:-1
so has part: feature:3050592-3050865:-1:exon
so has part: feature:3031100-3031194:-1:exon
so has part: feature:3029677-3029808:-1:exon
so has part: feature:3023833-3023979:-1:exon
so has part: feature:3023202-3023256:-1:exon
so has part: feature:3022739-3022869:-1:exon
so has part: feature:3022060-3022301:-1:exon
so has part: feature:3020014-3020228:-1:exon
so has part: feature:3018955-3019119:-1:exon
so has part: feature:3018777-3018875:-1:exon
so has part: feature:3017096-3017153:-1:exon
so has part: feature:3016320-3016494:-1:exon
so has part: feature:3015823-3015941:-1:exon
so has part: feature:3015246-3015344:-1:exon
so has part: feature:3014811-3014930:-1:exon
so has part: feature:3013958-3014062:-1:exon
so has part: feature:3012844-3013012:-1:exon
so has part: feature:3011156-3011351:-1:exon
so has part: feature:3010304-3010473:-1:exon
so has part: feature:3010000-3010131:-1:exon
so has part: feature:3009796-3009903:-1:exon
so has part: feature:3008949-3009133:-1:exon
so has part: feature:3008193-3008207:-1:exon
so has part: feature:3006145-3006278:-1:exon
so has part: feature:3005744-3005835:-1:exon

XP_030138581.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3050592-3050865:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3031100-3031194:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3029677-3029808:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3023833-3023979:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3023202-3023256:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3022739-3022869:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3022060-3022301:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3020014-3020228:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3018955-3019119:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3018777-3018875:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3017096-3017153:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3016320-3016494:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3015823-3015941:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3015246-3015344:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3014811-3014930:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3013958-3014062:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3012844-3013012:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3011156-3011351:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3010304-3010473:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3010000-3010131:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3009796-3009903:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3008949-3009133:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3008193-3008207:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3006145-3006278:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3005744-3005835:-1:exon

SLC12A4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: SLC12A4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 12 member 4 isoform X5
translation: MVNQVTENVKELLLKGHGNHKENSPFLNSSEASKGGDYYDRNLALFEEELDIRPKVSSLLGKLVNYTNLTQGVKEHEEAENTDGSKKKVSKSPSMGTLMGVYLPCMQNIFGVILFLRLTWMVGMAGVLQSFLIVLLCCCCTMLTTISMSAIATNGVVPAGGSYFMISRSLGPEFGGAVGLCFYLGTTFAGAMYILGAIEILLTYIVPQAAIFHPSGAHDASSAMLNNMRVYGTVFLILMAVVVFVGVKYVNKFASLFLACVVISILSIYAGAIKSIFDPPEFPICMLGNRTLSRDQFDVCAKTVVKDNMTVASKLWELFCHSTNLTTEHCDEYFLMNNVSEIAGIPGAASGILIDNLWSNYLEKGEILERAHQPSVDVAGQKNNLHLYVLSDITTSFMVLVGIFFPSVTGIMAGSNRSGDLKDAQKSIPVGTILAIVTTSLVYFSCVLLFGACIEGVVLRDKFGDAVNKNLVVGTLSWPSPWVIVIGSFFSTCGAGLQSLTGAPRLLQAIAKDNIIPFLWIFGHGKANGEPTWALLLTALIAELGILIASLDMVAPILSMFFLMCYLFVNLACAVQTLLRTPNWRPRFKYYHWALSFLGMSICLALMFISSWYYALVAMLIAGMIYKYIEYQGAEKEWGDGIRGLSLSAARYALLRLEEGPPHTKNWRPQLLVLLKLDEDLHVKYPRLLTFASQLKAGKGLTIIGSVIQGNFLETYGEAQAAEQTIKNMMEIEKVKGFCQVVVANKVREGIAHLIQSCGLGGMKHNTVVLGWPYGWRQSEDPRSWKTFIGTVRCTTAAHLALLVPKNVSFYPSNHERYNEGNIDVWWIVHDGGMLMLLPFLLKQHKVWRKCKMRIFTVAQMDDNSIQMKKDLATFLYQLRIEAEVEVVEMHNSDISAYTYERTLMMEQRSQMLRQMRLTKTEREREAQLVKDRHSIARLESLYSDEEDEADPVPENIQMTWTKEKCDAEKRNRGSAVGSFRDLITIKPGWENLNQSNVRRMHTAVKLNEVIVNRSHDARLVLLNMPGPPKNTDGDENYMEFLEVLTEGLERVLLVRGGGREVITIYS
SIO_010081: SLC12A4
subclass of: SO_0000673
so part of: SLC12A4
location: complement(join(3005744..3005835,3006145..3006278,3008193..3008207,3008949..3009133,3009796..3009903,3010000..3010131,3010304..3010473,3011156..3011351,3012844..3013012,3013958..3014062,3014811..3014930,3015246..3015344,3015823..3015941,3016320..3016494,3017096..3017153,3018777..3018875,3018955..3019119,3020014..3020228,3022060..3022301,3022739..3022869,3023202..3023256,3023833..3023979,3029677..3029808,3031100..3031194,3039151..3039196))
location: region:3005744-3039196:-1
so has part: feature:3039151-3039196:-1:exon
so has part: feature:3031100-3031194:-1:exon
so has part: feature:3029677-3029808:-1:exon
so has part: feature:3023833-3023979:-1:exon
so has part: feature:3023202-3023256:-1:exon
so has part: feature:3022739-3022869:-1:exon
so has part: feature:3022060-3022301:-1:exon
so has part: feature:3020014-3020228:-1:exon
so has part: feature:3018955-3019119:-1:exon
so has part: feature:3018777-3018875:-1:exon
so has part: feature:3017096-3017153:-1:exon
so has part: feature:3016320-3016494:-1:exon
so has part: feature:3015823-3015941:-1:exon
so has part: feature:3015246-3015344:-1:exon
so has part: feature:3014811-3014930:-1:exon
so has part: feature:3013958-3014062:-1:exon
so has part: feature:3012844-3013012:-1:exon
so has part: feature:3011156-3011351:-1:exon
so has part: feature:3010304-3010473:-1:exon
so has part: feature:3010000-3010131:-1:exon
so has part: feature:3009796-3009903:-1:exon
so has part: feature:3008949-3009133:-1:exon
so has part: feature:3008193-3008207:-1:exon
so has part: feature:3006145-3006278:-1:exon
so has part: feature:3005744-3005835:-1:exon

XP_030138584.1
type: Protein
SIO_000068: ncbiprotein

position:3039196:-1
position: 3039196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3039151-3039196:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3031100-3031194:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3029677-3029808:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3023833-3023979:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3023202-3023256:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3022739-3022869:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3022060-3022301:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3020014-3020228:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3018955-3019119:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3018777-3018875:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3017096-3017153:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3016320-3016494:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3015823-3015941:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3015246-3015344:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3014811-3014930:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3013958-3014062:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3012844-3013012:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3011156-3011351:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3010304-3010473:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3010000-3010131:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3009796-3009903:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3008949-3009133:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3008193-3008207:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3006145-3006278:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3005744-3005835:-1:exon

SLC12A4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: SLC12A4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 12 member 4 isoform X4
translation: MWKTVRMSQDGACPGDFVLQDVNCPRVKLGQEFPRVAFRGHIRSLPKLMEITRPSHASHGNHKENSPFLNSSEASKGGDYYDRNLALFEEELDIRPKVSSLLGKLVNYTNLTQGVKEHEEAENTDGSKKKVSKSPSMGTLMGVYLPCMQNIFGVILFLRLTWMVGMAGVLQSFLIVLLCCCCTMLTTISMSAIATNGVVPAGGSYFMISRSLGPEFGGAVGLCFYLGTTFAGAMYILGAIEILLTYIVPQAAIFHPSGAHDASSAMLNNMRVYGTVFLILMAVVVFVGVKYVNKFASLFLACVVISILSIYAGAIKSIFDPPEFPICMLGNRTLSRDQFDVCAKTVVKDNMTVASKLWELFCHSTNLTTEHCDEYFLMNNVSEIAGIPGAASGILIDNLWSNYLEKGEILERAHQPSVDVAGQKNNLHLYVLSDITTSFMVLVGIFFPSVTGIMAGSNRSGDLKDAQKSIPVGTILAIVTTSLVYFSCVLLFGACIEGVVLRDKFGDAVNKNLVVGTLSWPSPWVIVIGSFFSTCGAGLQSLTGAPRLLQAIAKDNIIPFLWIFGHGKANGEPTWALLLTALIAELGILIASLDMVAPILSMFFLMCYLFVNLACAVQTLLRTPNWRPRFKYYHWALSFLGMSICLALMFISSWYYALVAMLIAGMIYKYIEYQGAEKEWGDGIRGLSLSAARYALLRLEEGPPHTKNWRPQLLVLLKLDEDLHVKYPRLLTFASQLKAGKGLTIIGSVIQGNFLETYGEAQAAEQTIKNMMEIEKVKGFCQVVVANKVREGIAHLIQSCGLGGMKHNTVVLGWPYGWRQSEDPRSWKTFIGTVRCTTAAHLALLVPKNVSFYPSNHERYNEGNIDVWWIVHDGGMLMLLPFLLKQHKVWRKCKMRIFTVAQMDDNSIQMKKDLATFLYQLRIEAEVEVVEMHNSDISAYTYERTLMMEQRSQMLRQMRLTKTEREREAQLVKDRHSIARLESLYSDEEDEADPVPENIQMTWTKEKCDAEKRNRGSAVGSFRDLITIKPNQSNVRRMHTAVKLNEVIVNRSHDARLVLLNMPGPPKNTDGDENYMEFLEVLTEGLERVLLVRGGGREVITIYS
SIO_010081: SLC12A4
subclass of: SO_0000673
so part of: SLC12A4
location: complement(join(3005744..3005835,3006145..3006278,3008949..3009133,3009796..3009903,3010000..3010131,3010304..3010473,3011156..3011351,3012844..3013012,3013958..3014062,3014811..3014930,3015246..3015344,3015823..3015941,3016320..3016494,3017096..3017153,3018777..3018875,3018955..3019119,3020014..3020228,3022060..3022301,3022739..3022869,3023202..3023256,3023833..3023979,3029677..3029808,3031100..3031194,3034541..3034712))
location: region:3005744-3034712:-1
so has part: feature:3034541-3034712:-1:exon
so has part: feature:3031100-3031194:-1:exon
so has part: feature:3029677-3029808:-1:exon
so has part: feature:3023833-3023979:-1:exon
so has part: feature:3023202-3023256:-1:exon
so has part: feature:3022739-3022869:-1:exon
so has part: feature:3022060-3022301:-1:exon
so has part: feature:3020014-3020228:-1:exon
so has part: feature:3018955-3019119:-1:exon
so has part: feature:3018777-3018875:-1:exon
so has part: feature:3017096-3017153:-1:exon
so has part: feature:3016320-3016494:-1:exon
so has part: feature:3015823-3015941:-1:exon
so has part: feature:3015246-3015344:-1:exon
so has part: feature:3014811-3014930:-1:exon
so has part: feature:3013958-3014062:-1:exon
so has part: feature:3012844-3013012:-1:exon
so has part: feature:3011156-3011351:-1:exon
so has part: feature:3010304-3010473:-1:exon
so has part: feature:3010000-3010131:-1:exon
so has part: feature:3009796-3009903:-1:exon
so has part: feature:3008949-3009133:-1:exon
so has part: feature:3006145-3006278:-1:exon
so has part: feature:3005744-3005835:-1:exon

XP_004175039.3
type: Protein
SIO_000068: ncbiprotein

position:3034712:-1
position: 3034712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3034541-3034712:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3031100-3031194:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3029677-3029808:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3023833-3023979:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3023202-3023256:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3022739-3022869:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3022060-3022301:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3020014-3020228:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3018955-3019119:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3018777-3018875:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3017096-3017153:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3016320-3016494:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3015823-3015941:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3015246-3015344:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3014811-3014930:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3013958-3014062:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3012844-3013012:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3011156-3011351:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3010304-3010473:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3010000-3010131:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3009796-3009903:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3008949-3009133:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3006145-3006278:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3005744-3005835:-1:exon

SLC12A4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: SLC12A4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 12 member 4 isoform X3
translation: MWKTVRMSQDGACPGDFVLQDVNCPRVKLGQEFPRVAFRGHIRSLPKLMEITRPSHASHGNHKENSPFLNSSEASKGGDYYDRNLALFEEELDIRPKVSSLLGKLVNYTNLTQGVKEHEEAENTDGSKKKVSKSPSMGTLMGVYLPCMQNIFGVILFLRLTWMVGMAGVLQSFLIVLLCCCCTMLTTISMSAIATNGVVPAGGSYFMISRSLGPEFGGAVGLCFYLGTTFAGAMYILGAIEILLTYIVPQAAIFHPSGAHDASSAMLNNMRVYGTVFLILMAVVVFVGVKYVNKFASLFLACVVISILSIYAGAIKSIFDPPEFPICMLGNRTLSRDQFDVCAKTVVKDNMTVASKLWELFCHSTNLTTEHCDEYFLMNNVSEIAGIPGAASGILIDNLWSNYLEKGEILERAHQPSVDVAGQKNNLHLYVLSDITTSFMVLVGIFFPSVTGIMAGSNRSGDLKDAQKSIPVGTILAIVTTSLVYFSCVLLFGACIEGVVLRDKFGDAVNKNLVVGTLSWPSPWVIVIGSFFSTCGAGLQSLTGAPRLLQAIAKDNIIPFLWIFGHGKANGEPTWALLLTALIAELGILIASLDMVAPILSMFFLMCYLFVNLACAVQTLLRTPNWRPRFKYYHWALSFLGMSICLALMFISSWYYALVAMLIAGMIYKYIEYQGAEKEWGDGIRGLSLSAARYALLRLEEGPPHTKNWRPQLLVLLKLDEDLHVKYPRLLTFASQLKAGKGLTIIGSVIQGNFLETYGEAQAAEQTIKNMMEIEKVKGFCQVVVANKVREGIAHLIQSCGLGGMKHNTVVLGWPYGWRQSEDPRSWKTFIGTVRCTTAAHLALLVPKNVSFYPSNHERYNEGNIDVWWIVHDGGMLMLLPFLLKQHKVWRKCKMRIFTVAQMDDNSIQMKKDLATFLYQLRIEAEVEVVEMHNSDISAYTYERTLMMEQRSQMLRQMRLTKTEREREAQLVKDRHSIARLESLYSDEEDEADPVPENIQMTWTKEKCDAEKRNRGSAVGSFRDLITIKPGWENLNQSNVRRMHTAVKLNEVIVNRSHDARLVLLNMPGPPKNTDGDENYMEFLEVLTEGLERVLLVRGGGREVITIYS
SIO_010081: SLC12A4
subclass of: SO_0000673
so part of: SLC12A4
location: complement(join(3005744..3005835,3006145..3006278,3008193..3008207,3008949..3009133,3009796..3009903,3010000..3010131,3010304..3010473,3011156..3011351,3012844..3013012,3013958..3014062,3014811..3014930,3015246..3015344,3015823..3015941,3016320..3016494,3017096..3017153,3018777..3018875,3018955..3019119,3020014..3020228,3022060..3022301,3022739..3022869,3023202..3023256,3023833..3023979,3029677..3029808,3031100..3031194,3034541..3034712))
location: region:3005744-3034712:-1
so has part: feature:3034541-3034712:-1:exon
so has part: feature:3031100-3031194:-1:exon
so has part: feature:3029677-3029808:-1:exon
so has part: feature:3023833-3023979:-1:exon
so has part: feature:3023202-3023256:-1:exon
so has part: feature:3022739-3022869:-1:exon
so has part: feature:3022060-3022301:-1:exon
so has part: feature:3020014-3020228:-1:exon
so has part: feature:3018955-3019119:-1:exon
so has part: feature:3018777-3018875:-1:exon
so has part: feature:3017096-3017153:-1:exon
so has part: feature:3016320-3016494:-1:exon
so has part: feature:3015823-3015941:-1:exon
so has part: feature:3015246-3015344:-1:exon
so has part: feature:3014811-3014930:-1:exon
so has part: feature:3013958-3014062:-1:exon
so has part: feature:3012844-3013012:-1:exon
so has part: feature:3011156-3011351:-1:exon
so has part: feature:3010304-3010473:-1:exon
so has part: feature:3010000-3010131:-1:exon
so has part: feature:3009796-3009903:-1:exon
so has part: feature:3008949-3009133:-1:exon
so has part: feature:3008193-3008207:-1:exon
so has part: feature:3006145-3006278:-1:exon
so has part: feature:3005744-3005835:-1:exon

XP_012425805.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3034541-3034712:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3031100-3031194:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3029677-3029808:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3023833-3023979:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3023202-3023256:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3022739-3022869:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3022060-3022301:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3020014-3020228:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3018955-3019119:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3018777-3018875:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3017096-3017153:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3016320-3016494:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3015823-3015941:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3015246-3015344:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3014811-3014930:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3013958-3014062:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3012844-3013012:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3011156-3011351:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3010304-3010473:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3010000-3010131:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3009796-3009903:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3008949-3009133:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3008193-3008207:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3006145-3006278:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3005744-3005835:-1:exon

SLC12A4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: SLC12A4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 12 member 4 isoform X3
translation: MWKTVRMSQDGACPGDFVLQDVNCPRVKLGQEFPRVAFRGHIRSLPKLMEITRPSHASHGNHKENSPFLNSSEASKGGDYYDRNLALFEEELDIRPKVSSLLGKLVNYTNLTQGVKEHEEAENTDGSKKKVSKSPSMGTLMGVYLPCMQNIFGVILFLRLTWMVGMAGVLQSFLIVLLCCCCTMLTTISMSAIATNGVVPAGGSYFMISRSLGPEFGGAVGLCFYLGTTFAGAMYILGAIEILLTYIVPQAAIFHPSGAHDASSAMLNNMRVYGTVFLILMAVVVFVGVKYVNKFASLFLACVVISILSIYAGAIKSIFDPPEFPICMLGNRTLSRDQFDVCAKTVVKDNMTVASKLWELFCHSTNLTTEHCDEYFLMNNVSEIAGIPGAASGILIDNLWSNYLEKGEILERAHQPSVDVAGQKNNLHLYVLSDITTSFMVLVGIFFPSVTGIMAGSNRSGDLKDAQKSIPVGTILAIVTTSLVYFSCVLLFGACIEGVVLRDKFGDAVNKNLVVGTLSWPSPWVIVIGSFFSTCGAGLQSLTGAPRLLQAIAKDNIIPFLWIFGHGKANGEPTWALLLTALIAELGILIASLDMVAPILSMFFLMCYLFVNLACAVQTLLRTPNWRPRFKYYHWALSFLGMSICLALMFISSWYYALVAMLIAGMIYKYIEYQGAEKEWGDGIRGLSLSAARYALLRLEEGPPHTKNWRPQLLVLLKLDEDLHVKYPRLLTFASQLKAGKGLTIIGSVIQGNFLETYGEAQAAEQTIKNMMEIEKVKGFCQVVVANKVREGIAHLIQSCGLGGMKHNTVVLGWPYGWRQSEDPRSWKTFIGTVRCTTAAHLALLVPKNVSFYPSNHERYNEGNIDVWWIVHDGGMLMLLPFLLKQHKVWRKCKMRIFTVAQMDDNSIQMKKDLATFLYQLRIEAEVEVVEMHNSDISAYTYERTLMMEQRSQMLRQMRLTKTEREREAQLVKDRHSIARLESLYSDEEDEADPVPENIQMTWTKEKCDAEKRNRGSAVGSFRDLITIKPGWENLNQSNVRRMHTAVKLNEVIVNRSHDARLVLLNMPGPPKNTDGDENYMEFLEVLTEGLERVLLVRGGGREVITIYS
SIO_010081: SLC12A4
subclass of: SO_0000673
so part of: SLC12A4
location: complement(join(3005744..3005835,3006145..3006278,3008193..3008207,3008949..3009133,3009796..3009903,3010000..3010131,3010304..3010473,3011156..3011351,3012844..3013012,3013958..3014062,3014811..3014930,3015246..3015344,3015823..3015941,3016320..3016494,3017096..3017153,3018777..3018875,3018955..3019119,3020014..3020228,3022060..3022301,3022739..3022869,3023202..3023256,3023833..3023979,3029677..3029808,3031100..3031194,3034541..3034712))
location: region:3005744-3034712:-1
so has part: feature:3034541-3034712:-1:exon
so has part: feature:3031100-3031194:-1:exon
so has part: feature:3029677-3029808:-1:exon
so has part: feature:3023833-3023979:-1:exon
so has part: feature:3023202-3023256:-1:exon
so has part: feature:3022739-3022869:-1:exon
so has part: feature:3022060-3022301:-1:exon
so has part: feature:3020014-3020228:-1:exon
so has part: feature:3018955-3019119:-1:exon
so has part: feature:3018777-3018875:-1:exon
so has part: feature:3017096-3017153:-1:exon
so has part: feature:3016320-3016494:-1:exon
so has part: feature:3015823-3015941:-1:exon
so has part: feature:3015246-3015344:-1:exon
so has part: feature:3014811-3014930:-1:exon
so has part: feature:3013958-3014062:-1:exon
so has part: feature:3012844-3013012:-1:exon
so has part: feature:3011156-3011351:-1:exon
so has part: feature:3010304-3010473:-1:exon
so has part: feature:3010000-3010131:-1:exon
so has part: feature:3009796-3009903:-1:exon
so has part: feature:3008949-3009133:-1:exon
so has part: feature:3008193-3008207:-1:exon
so has part: feature:3006145-3006278:-1:exon
so has part: feature:3005744-3005835:-1:exon

XP_041574460.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3034541-3034712:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3031100-3031194:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3029677-3029808:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3023833-3023979:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3023202-3023256:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3022739-3022869:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3022060-3022301:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3020014-3020228:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3018955-3019119:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3018777-3018875:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3017096-3017153:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3016320-3016494:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3015823-3015941:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3015246-3015344:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3014811-3014930:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3013958-3014062:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3012844-3013012:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3011156-3011351:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3010304-3010473:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3010000-3010131:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3009796-3009903:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3008949-3009133:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3008193-3008207:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3006145-3006278:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3005744-3005835:-1:exon

SLC12A4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: SLC12A4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 12 member 4 isoform X6
translation: MGTLMGVYLPCMQNIFGVILFLRLTWMVGMAGVLQSFLIVLLCCCCTMLTTISMSAIATNGVVPAGGSYFMISRSLGPEFGGAVGLCFYLGTTFAGAMYILGAIEILLTYIVPQAAIFHPSGAHDASSAMLNNMRVYGTVFLILMAVVVFVGVKYVNKFASLFLACVVISILSIYAGAIKSIFDPPEFPICMLGNRTLSRDQFDVCAKTVVKDNMTVASKLWELFCHSTNLTTEHCDEYFLMNNVSEIAGIPGAASGILIDNLWSNYLEKGEILERAHQPSVDVAGQKNNLHLYVLSDITTSFMVLVGIFFPSVTGIMAGSNRSGDLKDAQKSIPVGTILAIVTTSLVYFSCVLLFGACIEGVVLRDKFGDAVNKNLVVGTLSWPSPWVIVIGSFFSTCGAGLQSLTGAPRLLQAIAKDNIIPFLWIFGHGKANGEPTWALLLTALIAELGILIASLDMVAPILSMFFLMCYLFVNLACAVQTLLRTPNWRPRFKYYHWALSFLGMSICLALMFISSWYYALVAMLIAGMIYKYIEYQGAEKEWGDGIRGLSLSAARYALLRLEEGPPHTKNWRPQLLVLLKLDEDLHVKYPRLLTFASQLKAGKGLTIIGSVIQGNFLETYGEAQAAEQTIKNMMEIEKVKGFCQVVVANKVREGIAHLIQSCGLGGMKHNTVVLGWPYGWRQSEDPRSWKTFIGTVRCTTAAHLALLVPKNVSFYPSNHERYNEGNIDVWWIVHDGGMLMLLPFLLKQHKVWRKCKMRIFTVAQMDDNSIQMKKDLATFLYQLRIEAEVEVVEMHNSDISAYTYERTLMMEQRSQMLRQMRLTKTEREREAQLVKDRHSIARLESLYSDEEDEADPVPENIQMTWTKEKCDAEKRNRGSAVGSFRDLITIKPGWENLNQSNVRRMHTAVKLNEVIVNRSHDARLVLLNMPGPPKNTDGDENYMEFLEVLTEGLERVLLVRGGGREVITIYS
SIO_010081: SLC12A4
subclass of: SO_0000673
so part of: SLC12A4
location: complement(join(3005744..3005835,3006145..3006278,3008193..3008207,3008949..3009133,3009796..3009903,3010000..3010131,3010304..3010473,3011156..3011351,3012844..3013012,3013958..3014062,3014811..3014930,3015246..3015344,3015823..3015941,3016320..3016494,3017096..3017153,3018777..3018875,3018955..3019119,3020014..3020228,3022060..3022301,3022739..3022869,3023202..3023256,3023833..3023970))
location: region:3005744-3023970:-1
so has part: feature:3023833-3023970:-1:exon
so has part: feature:3023202-3023256:-1:exon
so has part: feature:3022739-3022869:-1:exon
so has part: feature:3022060-3022301:-1:exon
so has part: feature:3020014-3020228:-1:exon
so has part: feature:3018955-3019119:-1:exon
so has part: feature:3018777-3018875:-1:exon
so has part: feature:3017096-3017153:-1:exon
so has part: feature:3016320-3016494:-1:exon
so has part: feature:3015823-3015941:-1:exon
so has part: feature:3015246-3015344:-1:exon
so has part: feature:3014811-3014930:-1:exon
so has part: feature:3013958-3014062:-1:exon
so has part: feature:3012844-3013012:-1:exon
so has part: feature:3011156-3011351:-1:exon
so has part: feature:3010304-3010473:-1:exon
so has part: feature:3010000-3010131:-1:exon
so has part: feature:3009796-3009903:-1:exon
so has part: feature:3008949-3009133:-1:exon
so has part: feature:3008193-3008207:-1:exon
so has part: feature:3006145-3006278:-1:exon
so has part: feature:3005744-3005835:-1:exon

XP_012425813.1
type: Protein
SIO_000068: ncbiprotein

position:3023970:-1
position: 3023970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3023833-3023970:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3023202-3023256:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3022739-3022869:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3022060-3022301:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3020014-3020228:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3018955-3019119:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3018777-3018875:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3017096-3017153:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3016320-3016494:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3015823-3015941:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3015246-3015344:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3014811-3014930:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3013958-3014062:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3012844-3013012:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3011156-3011351:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3010304-3010473:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3010000-3010131:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3009796-3009903:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3008949-3009133:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3008193-3008207:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3006145-3006278:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3005744-3005835:-1:exon

LOC100220796
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC100220796
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3059097..3070812)
location: region:3059097-3070812:-1
so has part: feature:3059097-3070812:-1:exon
subclass of: SO_0000010

100220796
type: Gene
SIO_000068: ncbigene

position:3059097:-1
position: 3059097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3070812:-1
position: 3070812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3059097-3070812:-1:exon

LOC100220796
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC100220796
product: dipeptidase 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_030282425.3
SIO_010081: LOC100220796
subclass of: SO_0000673
so part of: LOC100220796
location: complement(join(3059097..3061238,3062510..3062645,3064261..3064336,3064911..3064998,3065511..3065687,3066190..3066259,3066693..3066834,3067163..3067292,3067751..3067877,3068669..3068949,3070537..3070812))
location: region:3059097-3070812:-1
so has part: feature:3070537-3070812:-1:exon
so has part: feature:3068669-3068949:-1:exon
so has part: feature:3067751-3067877:-1:exon
so has part: feature:3067163-3067292:-1:exon
so has part: feature:3066693-3066834:-1:exon
so has part: feature:3066190-3066259:-1:exon
so has part: feature:3065511-3065687:-1:exon
so has part: feature:3064911-3064998:-1:exon
so has part: feature:3064261-3064336:-1:exon
so has part: feature:3062510-3062645:-1:exon
so has part: feature:3059097-3061238:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3070537-3070812:-1:exon

position:3070537:-1
position: 3070537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3068669-3068949:-1:exon

position:3068669:-1
position: 3068669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3068949:-1
position: 3068949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3067751-3067877:-1:exon

position:3067751:-1
position: 3067751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3067877:-1
position: 3067877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3067163-3067292:-1:exon

position:3067163:-1
position: 3067163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3067292:-1
position: 3067292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3066693-3066834:-1:exon

position:3066693:-1
position: 3066693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3066834:-1
position: 3066834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3066190-3066259:-1:exon

position:3066190:-1
position: 3066190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3066259:-1
position: 3066259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3065511-3065687:-1:exon

position:3065511:-1
position: 3065511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3065687:-1
position: 3065687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3064911-3064998:-1:exon

position:3064911:-1
position: 3064911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3064998:-1
position: 3064998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3064261-3064336:-1:exon

position:3064261:-1
position: 3064261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3064336:-1
position: 3064336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3062510-3062645:-1:exon

position:3062510:-1
position: 3062510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3062645:-1
position: 3062645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3059097-3061238:-1:exon

position:3061238:-1
position: 3061238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100220796
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC100220796
product: dipeptidase 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_030282426.3
SIO_010081: LOC100220796
subclass of: SO_0000673
so part of: LOC100220796
location: complement(join(3059097..3061238,3062510..3062645,3064261..3064336,3064911..3064998,3065511..3065687,3066190..3066259,3066693..3066834,3067163..3067266,3067751..3067877))
location: region:3059097-3067877:-1
so has part: feature:3067751-3067877:-1:exon
so has part: feature:3067163-3067266:-1:exon
so has part: feature:3066693-3066834:-1:exon
so has part: feature:3066190-3066259:-1:exon
so has part: feature:3065511-3065687:-1:exon
so has part: feature:3064911-3064998:-1:exon
so has part: feature:3064261-3064336:-1:exon
so has part: feature:3062510-3062645:-1:exon
so has part: feature:3059097-3061238:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3067751-3067877:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3067163-3067266:-1:exon

position:3067266:-1
position: 3067266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3066693-3066834:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3066190-3066259:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3065511-3065687:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3064911-3064998:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3064261-3064336:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3062510-3062645:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3059097-3061238:-1:exon

LOC100220796
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC100220796
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dipeptidase 2 isoform X1
translation: MEIKRDTAKLLWLLMFFSDIVPFGCGKAMRERAIELMQDARLIDGHNDFVLQLRILYQNRLSRVNLRELNTTHTNLVKLQAGYVGAQFWSVYVLCSAQNKDAVRLTLEQIDVVKRMCNSYEELELVVTSQGISDSRRIACLIGIEGGHSIDSSLATLRMYYDLGVRYMTLTHSCNTPWSESSSKGIHNFYPSVIGLTAFGQEVVKEMNRLGMLIDLSHTSYSTVKAALSISKAPVIFSHSAAFSVCNHSRNVPDDILQQLKKNKGIIMVTFNADVLACGRKVVTISTLADHFDHIKEIAGSESIGIGGDYDGVEHFPKGLEDVSKYPSLIEELLRRGWNETELKGVLRENFLRVFREVENVRNTFGVMDVGESEILQEAQNSCRLDLRKPQPLPSRSFGFPSVAQPFSLTIVSCLMLYYVS
SIO_010081: LOC100220796
subclass of: SO_0000673
so part of: LOC100220796
location: complement(join(3061053..3061238,3062510..3062645,3064261..3064336,3064911..3064998,3065511..3065687,3066190..3066259,3066693..3066834,3067163..3067292,3067751..3067877,3068669..3068802))
location: region:3061053-3068802:-1
so has part: feature:3068669-3068802:-1:exon
so has part: feature:3067751-3067877:-1:exon
so has part: feature:3067163-3067292:-1:exon
so has part: feature:3066693-3066834:-1:exon
so has part: feature:3066190-3066259:-1:exon
so has part: feature:3065511-3065687:-1:exon
so has part: feature:3064911-3064998:-1:exon
so has part: feature:3064261-3064336:-1:exon
so has part: feature:3062510-3062645:-1:exon
so has part: feature:3061053-3061238:-1:exon

XP_030138285.1
type: Protein
SIO_000068: ncbiprotein

position:3061053:-1
position: 3061053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3068802:-1
position: 3068802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3068669-3068802:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3067751-3067877:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3067163-3067292:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3066693-3066834:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3066190-3066259:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3065511-3065687:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3064911-3064998:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3064261-3064336:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3062510-3062645:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3061053-3061238:-1:exon

LOC100220796
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC100220796
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dipeptidase 2 isoform X2
translation: MWELSAQNKDAVRLTLEQIDVVKRMCNSYEELELVVTSQGISDSRRIACLIGIEGGHSIDSSLATLRMYYDLGVRYMTLTHSCNTPWSESSSKGIHNFYPSVIGLTAFGQEVVKEMNRLGMLIDLSHTSYSTVKAALSISKAPVIFSHSAAFSVCNHSRNVPDDILQQLKKNKGIIMVTFNADVLACGRKVVTISTLADHFDHIKEIAGSESIGIGGDYDGVEHFPKGLEDVSKYPSLIEELLRRGWNETELKGVLRENFLRVFREVENVRNTFGVMDVGESEILQEAQNSCRLDLRKPQPLPSRSFGFPSVAQPFSLTIVSCLMLYYVS
SIO_010081: LOC100220796
subclass of: SO_0000673
so part of: LOC100220796
location: complement(join(3061053..3061238,3062510..3062645,3064261..3064336,3064911..3064998,3065511..3065687,3066190..3066259,3066693..3066834,3067163..3067266,3067751..3067764))
location: region:3061053-3067764:-1
so has part: feature:3067751-3067764:-1:exon
so has part: feature:3067163-3067266:-1:exon
so has part: feature:3066693-3066834:-1:exon
so has part: feature:3066190-3066259:-1:exon
so has part: feature:3065511-3065687:-1:exon
so has part: feature:3064911-3064998:-1:exon
so has part: feature:3064261-3064336:-1:exon
so has part: feature:3062510-3062645:-1:exon
so has part: feature:3061053-3061238:-1:exon

XP_030138286.1
type: Protein
SIO_000068: ncbiprotein

position:3067764:-1
position: 3067764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3067751-3067764:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3067163-3067266:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3066693-3066834:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3066190-3066259:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3065511-3065687:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3064911-3064998:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3064261-3064336:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3062510-3062645:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3061053-3061238:-1:exon

LOC100218944
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC100218944
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3080454..3093020
location: region:3080454-3093020:1
so has part: feature:3080454-3093020:1:exon
subclass of: SO_0000010

100218944
type: Gene
SIO_000068: ncbigene

position:3080454:1
position: 3080454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3093020:1
position: 3093020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3080454-3093020:1:exon

LOC100218944
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC100218944
product: galanin receptor type 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041718557.1
SIO_010081: LOC100218944
subclass of: SO_0000673
so part of: LOC100218944
location: join(3080454..3081765,3082629..3082694,3091547..3093020)
location: region:3080454-3093020:1
so has part: feature:3080454-3081765:1:exon
so has part: feature:3082629-3082694:1:exon
so has part: feature:3091547-3093020:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3080454-3081765:1:exon

position:3081765:1
position: 3081765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3082629-3082694:1:exon

position:3082629:1
position: 3082629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3082694:1
position: 3082694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3091547-3093020:1:exon

position:3091547:1
position: 3091547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100218944
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC100218944
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: galanin receptor type 1-like
translation: MEEQEYNFVLSFGANTSKCSLETNQTEVPTCWAGATRGGPEVVIVPVLFGLIFLLGMVGNTLVLVVLGRLRPGGRPSRSATNIFILNLSIADFSFLLFCVPFQATIYSLPEWIFGAFFCKWVHYSAMATMLVSIFTLVAMSVDRYIAVVHAKRSPCIRSKRNAVLGVAVIWLLSLLIAIPVAQHQALMSGHQQAPNSSFCWEHWANGSTAKQMYKITILLVGYLLPLLLITCCYAKVLYHLHKKVKNISKKSERSKKKTAQTVLLVVAVFLLSWLPHHIITMWAEFGHFPLNNISFTFRIISHCLAYGNSCINPILYAFLSENFRKACRQVFTCKLFLRPAAAEKLARVRMENFSTTHSTTNV
SIO_010081: LOC100218944
subclass of: SO_0000673
so part of: LOC100218944
location: join(3081058..3081765,3082629..3082694,3091547..3091864)
location: region:3081058-3091864:1
so has part: feature:3081058-3081765:1:exon
so has part: feature:3082629-3082694:1:exon
so has part: feature:3091547-3091864:1:exon

XP_041574491.1
type: Protein
SIO_000068: ncbiprotein

position:3081058:1
position: 3081058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3091864:1
position: 3091864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3081058-3081765:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3082629-3082694:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3091547-3091864:1:exon

DDX28
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: DDX28
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3093683..>3096265)
location: region:3093683-3096265:-1
so has part: feature:3093683-3096265:-1:exon
subclass of: SO_0000010

100223737
type: Gene
SIO_000068: ncbigene

position:3093683:-1
position: 3093683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3096265:-1
position: 3096265
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3093683-3096265:-1:exon

DDX28
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: DDX28
product: DEAD-box helicase 28
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 14 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030282212.3
SIO_010081: DDX28
subclass of: SO_0000673
so part of: DDX28
location: complement(3093683..>3096265)
location: region:3093683-3096265:-1
so has part: feature:3093683-3096265:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3093683-3096265:-1:exon

DDX28
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: DDX28
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX28
translation: VAGTGLAQRECAGDAPRHTGSFPSEXPRAAPATAPGGRDCSRGGGAGKALRRQRKRANEGSGTXRRTHPPGVAPPRLCGAGRTGAGAAFRRHRAAPPPRVGAAMALGRAGPVLALPLLLPRRPASSGTAAAAGSPQPPGAVVRVPWALRQRLQRGAQRRRREQGEAAPAPRSGKLLLRSRRPELSQPRWQTVGRWEQPPLVSAGWKHRKAYGDYFQLEPSQEAAPALQAPPAEAGQGPTFAELGLQPALLAGLERLSIGRPTAVQRLAIPALRRGRSALCAAETGSGKTLAYLLPLLERLLGRPEAPAEAAGPAAPRGLVVLPSRELAAQVGAVAAALCAPAGLAVRGLTGGGAAGGLRRQLRAPPPGPAVLLGTPGALREALRRRFLALERLRWMVLDEADLLMDESFTELLEEILAHAPLAAGAPGPAGPDEERTQVVVVGATFPAGLSETLAKFTDVGQFVTLSTQSLHRLPPHVQQKFVRLKGRDKLPELLQLLKERPSSGGAVLIFCNSASTVNWLGYILDDHKIKHLRLQGQMSAAARAGIFASFQKGDVSVLVCTDLASRGLDTSSVQLVVNYDFPDTLQDYLHRAGRVGRVGSKAPGAVVSFVTHRWDVDLVRKIETAARKRTGLPGMDSINKPSPKGG
SIO_010081: DDX28
subclass of: SO_0000673
so part of: DDX28
location: complement(3094324..>3096265)
location: region:3094324-3096265:-1
so has part: feature:3094324-3096265:-1:exon

XP_030138072.3
type: Protein
SIO_000068: ncbiprotein

position:3094324:-1
position: 3094324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3094324-3096265:-1:exon

DUS2
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: DUS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3095260..3111349
location: region:3095260-3111349:1
so has part: feature:3095260-3111349:1:exon
subclass of: SO_0000010

100221777
type: Gene
SIO_000068: ncbigene

position:3095260:1
position: 3095260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3111349:1
position: 3111349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3095260-3111349:1:exon

DUS2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: DUS2
product: dihydrouridine synthase 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_030282215.3
SIO_010081: DUS2
subclass of: SO_0000673
so part of: DUS2
location: join(3095260..3095391,3096385..3096524,3097403..3097448,3098127..3098218,3099063..3099106,3099772..3099832,3100927..3100974,3101573..3101638,3103053..3103123,3103518..3103604,3103710..3103878,3104847..3104968,3107591..3107734,3108880..3108967,3109576..3109649,3110865..3111349)
location: region:3095260-3111349:1
so has part: feature:3095260-3095391:1:exon
so has part: feature:3096385-3096524:1:exon
so has part: feature:3097403-3097448:1:exon
so has part: feature:3098127-3098218:1:exon
so has part: feature:3099063-3099106:1:exon
so has part: feature:3099772-3099832:1:exon
so has part: feature:3100927-3100974:1:exon
so has part: feature:3101573-3101638:1:exon
so has part: feature:3103053-3103123:1:exon
so has part: feature:3103518-3103604:1:exon
so has part: feature:3103710-3103878:1:exon
so has part: feature:3104847-3104968:1:exon
so has part: feature:3107591-3107734:1:exon
so has part: feature:3108880-3108967:1:exon
so has part: feature:3109576-3109649:1:exon
so has part: feature:3110865-3111349:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3095260-3095391:1:exon

position:3095391:1
position: 3095391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3096385-3096524:1:exon

position:3096385:1
position: 3096385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3096524:1
position: 3096524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3097403-3097448:1:exon

position:3097403:1
position: 3097403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3097448:1
position: 3097448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3098127-3098218:1:exon

position:3098127:1
position: 3098127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3098218:1
position: 3098218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3099063-3099106:1:exon

position:3099063:1
position: 3099063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3099106:1
position: 3099106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3099772-3099832:1:exon

position:3099772:1
position: 3099772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3099832:1
position: 3099832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3100927-3100974:1:exon

position:3100927:1
position: 3100927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3100974:1
position: 3100974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3101573-3101638:1:exon

position:3101573:1
position: 3101573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3101638:1
position: 3101638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3103053-3103123:1:exon

position:3103053:1
position: 3103053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3103123:1
position: 3103123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3103518-3103604:1:exon

position:3103518:1
position: 3103518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3103604:1
position: 3103604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3103710-3103878:1:exon

position:3103710:1
position: 3103710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3103878:1
position: 3103878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3104847-3104968:1:exon

position:3104847:1
position: 3104847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3104968:1
position: 3104968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3107591-3107734:1:exon

position:3107591:1
position: 3107591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3107734:1
position: 3107734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3108880-3108967:1:exon

position:3108880:1
position: 3108880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3108967:1
position: 3108967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3109576-3109649:1:exon

position:3109576:1
position: 3109576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3109649:1
position: 3109649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3110865-3111349:1:exon

position:3110865:1
position: 3110865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DUS2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: DUS2
product: dihydrouridine synthase 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 58 samples with support for all annotated introns
transcript id: XM_030282214.3
SIO_010081: DUS2
subclass of: SO_0000673
so part of: DUS2
location: join(3095927..3096063,3096385..3096524,3097403..3097448,3098127..3098218,3099063..3099106,3099772..3099832,3100927..3100974,3101573..3101638,3103053..3103123,3103518..3103604,3103710..3103878,3104847..3104968,3107591..3107734,3108880..3108967,3109576..3109649,3110865..3111349)
location: region:3095927-3111349:1
so has part: feature:3095927-3096063:1:exon
so has part: feature:3096385-3096524:1:exon
so has part: feature:3097403-3097448:1:exon
so has part: feature:3098127-3098218:1:exon
so has part: feature:3099063-3099106:1:exon
so has part: feature:3099772-3099832:1:exon
so has part: feature:3100927-3100974:1:exon
so has part: feature:3101573-3101638:1:exon
so has part: feature:3103053-3103123:1:exon
so has part: feature:3103518-3103604:1:exon
so has part: feature:3103710-3103878:1:exon
so has part: feature:3104847-3104968:1:exon
so has part: feature:3107591-3107734:1:exon
so has part: feature:3108880-3108967:1:exon
so has part: feature:3109576-3109649:1:exon
so has part: feature:3110865-3111349:1:exon

position:3095927:1
position: 3095927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3095927-3096063:1:exon

position:3096063:1
position: 3096063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3096385-3096524:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3097403-3097448:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3098127-3098218:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3099063-3099106:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3099772-3099832:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3100927-3100974:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3101573-3101638:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3103053-3103123:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3103518-3103604:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3103710-3103878:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3104847-3104968:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3107591-3107734:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3108880-3108967:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3109576-3109649:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3110865-3111349:1:exon

DUS2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: DUS2
product: dihydrouridine synthase 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 89 samples with support for all annotated introns
transcript id: XM_030282213.3
SIO_010081: DUS2
subclass of: SO_0000673
so part of: DUS2
location: join(3096142..3096524,3097403..3097448,3098127..3098218,3099063..3099106,3099772..3099832,3100927..3100974,3101573..3101638,3103053..3103123,3103518..3103604,3103710..3103878,3104847..3104968,3107591..3107734,3108880..3108967,3109576..3109649,3110865..3111349)
location: region:3096142-3111349:1
so has part: feature:3096142-3096524:1:exon
so has part: feature:3097403-3097448:1:exon
so has part: feature:3098127-3098218:1:exon
so has part: feature:3099063-3099106:1:exon
so has part: feature:3099772-3099832:1:exon
so has part: feature:3100927-3100974:1:exon
so has part: feature:3101573-3101638:1:exon
so has part: feature:3103053-3103123:1:exon
so has part: feature:3103518-3103604:1:exon
so has part: feature:3103710-3103878:1:exon
so has part: feature:3104847-3104968:1:exon
so has part: feature:3107591-3107734:1:exon
so has part: feature:3108880-3108967:1:exon
so has part: feature:3109576-3109649:1:exon
so has part: feature:3110865-3111349:1:exon

position:3096142:1
position: 3096142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3096142-3096524:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3097403-3097448:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3098127-3098218:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3099063-3099106:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3099772-3099832:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3100927-3100974:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3101573-3101638:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3103053-3103123:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3103518-3103604:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3103710-3103878:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3104847-3104968:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3107591-3107734:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3108880-3108967:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3109576-3109649:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3110865-3111349:1:exon

DUS2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: DUS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA-dihydrouridine(20) synthase [NAD(P)+]-like isoform X1
translation: MTVRGSPPGLSLSGGTATGMTVNTPLCFRGKKILAPMVRVGTLPMRLLALDYGADIVYCEELIDIKMMQCKRVINEVLETVDFVAPNDRVVFRTCERERERVVFQMGSADAERALAVAKLVESDVAGIDINMGCPKEYSTKGGMGAALLSDPDKIESILTTLVKGICKPVTCKIRILPSVEDTVNLVKRIEKTGIAAIAVHGRKKEERPQHPVHCDVIKAISEAVSIPVIANGGSHDFIKEYADIETFQKATAASSVMIARAAMWNPSVFRKEGFCPLKDVMQDYIKYAVRYDNHYTNTKYCLCQMLREQLETTQGKKLQAAQSTQEICEAFEMGDFYEETTAIFEAKKTSLETKMQDEDDQMEDPDVIKMAVRFDKREYPPQITPKMYLLEWCRKEKHPQPVYETVQRPLDRLFCSVVTVAEQKYRSTLWDKSKKLAEQAAAIVCLRTLGVPEGKLCEGENHLMNKRKRRDQEGLISRDHGEDLAEPSHKKANFIEETSDMNVPEMPR
SIO_010081: DUS2
subclass of: SO_0000673
so part of: DUS2
location: join(3096345..3096524,3097403..3097448,3098127..3098218,3099063..3099106,3099772..3099832,3100927..3100974,3101573..3101638,3103053..3103123,3103518..3103604,3103710..3103878,3104847..3104968,3107591..3107734,3108880..3108967,3109576..3109649,3110865..3111102)
location: region:3096345-3111102:1
so has part: feature:3096345-3096524:1:exon
so has part: feature:3097403-3097448:1:exon
so has part: feature:3098127-3098218:1:exon
so has part: feature:3099063-3099106:1:exon
so has part: feature:3099772-3099832:1:exon
so has part: feature:3100927-3100974:1:exon
so has part: feature:3101573-3101638:1:exon
so has part: feature:3103053-3103123:1:exon
so has part: feature:3103518-3103604:1:exon
so has part: feature:3103710-3103878:1:exon
so has part: feature:3104847-3104968:1:exon
so has part: feature:3107591-3107734:1:exon
so has part: feature:3108880-3108967:1:exon
so has part: feature:3109576-3109649:1:exon
so has part: feature:3110865-3111102:1:exon

XP_030138073.3
type: Protein
SIO_000068: ncbiprotein

position:3096345:1
position: 3096345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3111102:1
position: 3111102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3096345-3096524:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3097403-3097448:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3098127-3098218:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3099063-3099106:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3099772-3099832:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3100927-3100974:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3101573-3101638:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3103053-3103123:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3103518-3103604:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3103710-3103878:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3104847-3104968:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3107591-3107734:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3108880-3108967:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3109576-3109649:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3110865-3111102:1:exon

DUS2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: DUS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA-dihydrouridine(20) synthase [NAD(P)+]-like isoform X2
translation: MTVNTPLCFRGKKILAPMVRVGTLPMRLLALDYGADIVYCEELIDIKMMQCKRVINEVLETVDFVAPNDRVVFRTCERERERVVFQMGSADAERALAVAKLVESDVAGIDINMGCPKEYSTKGGMGAALLSDPDKIESILTTLVKGICKPVTCKIRILPSVEDTVNLVKRIEKTGIAAIAVHGRKKEERPQHPVHCDVIKAISEAVSIPVIANGGSHDFIKEYADIETFQKATAASSVMIARAAMWNPSVFRKEGFCPLKDVMQDYIKYAVRYDNHYTNTKYCLCQMLREQLETTQGKKLQAAQSTQEICEAFEMGDFYEETTAIFEAKKTSLETKMQDEDDQMEDPDVIKMAVRFDKREYPPQITPKMYLLEWCRKEKHPQPVYETVQRPLDRLFCSVVTVAEQKYRSTLWDKSKKLAEQAAAIVCLRTLGVPEGKLCEGENHLMNKRKRRDQEGLISRDHGEDLAEPSHKKANFIEETSDMNVPEMPR
SIO_010081: DUS2
subclass of: SO_0000673
so part of: DUS2
location: join(3096402..3096524,3097403..3097448,3098127..3098218,3099063..3099106,3099772..3099832,3100927..3100974,3101573..3101638,3103053..3103123,3103518..3103604,3103710..3103878,3104847..3104968,3107591..3107734,3108880..3108967,3109576..3109649,3110865..3111102)
location: region:3096402-3111102:1
so has part: feature:3096402-3096524:1:exon
so has part: feature:3097403-3097448:1:exon
so has part: feature:3098127-3098218:1:exon
so has part: feature:3099063-3099106:1:exon
so has part: feature:3099772-3099832:1:exon
so has part: feature:3100927-3100974:1:exon
so has part: feature:3101573-3101638:1:exon
so has part: feature:3103053-3103123:1:exon
so has part: feature:3103518-3103604:1:exon
so has part: feature:3103710-3103878:1:exon
so has part: feature:3104847-3104968:1:exon
so has part: feature:3107591-3107734:1:exon
so has part: feature:3108880-3108967:1:exon
so has part: feature:3109576-3109649:1:exon
so has part: feature:3110865-3111102:1:exon

XP_030138074.3
type: Protein
SIO_000068: ncbiprotein

position:3096402:1
position: 3096402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3096402-3096524:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3097403-3097448:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3098127-3098218:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3099063-3099106:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3099772-3099832:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3100927-3100974:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3101573-3101638:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3103053-3103123:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3103518-3103604:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3103710-3103878:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3104847-3104968:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3107591-3107734:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3108880-3108967:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3109576-3109649:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3110865-3111102:1:exon

DUS2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: DUS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA-dihydrouridine(20) synthase [NAD(P)+]-like isoform X2
translation: MTVNTPLCFRGKKILAPMVRVGTLPMRLLALDYGADIVYCEELIDIKMMQCKRVINEVLETVDFVAPNDRVVFRTCERERERVVFQMGSADAERALAVAKLVESDVAGIDINMGCPKEYSTKGGMGAALLSDPDKIESILTTLVKGICKPVTCKIRILPSVEDTVNLVKRIEKTGIAAIAVHGRKKEERPQHPVHCDVIKAISEAVSIPVIANGGSHDFIKEYADIETFQKATAASSVMIARAAMWNPSVFRKEGFCPLKDVMQDYIKYAVRYDNHYTNTKYCLCQMLREQLETTQGKKLQAAQSTQEICEAFEMGDFYEETTAIFEAKKTSLETKMQDEDDQMEDPDVIKMAVRFDKREYPPQITPKMYLLEWCRKEKHPQPVYETVQRPLDRLFCSVVTVAEQKYRSTLWDKSKKLAEQAAAIVCLRTLGVPEGKLCEGENHLMNKRKRRDQEGLISRDHGEDLAEPSHKKANFIEETSDMNVPEMPR
SIO_010081: DUS2
subclass of: SO_0000673
so part of: DUS2
location: join(3096402..3096524,3097403..3097448,3098127..3098218,3099063..3099106,3099772..3099832,3100927..3100974,3101573..3101638,3103053..3103123,3103518..3103604,3103710..3103878,3104847..3104968,3107591..3107734,3108880..3108967,3109576..3109649,3110865..3111102)
location: region:3096402-3111102:1
so has part: feature:3096402-3096524:1:exon
so has part: feature:3097403-3097448:1:exon
so has part: feature:3098127-3098218:1:exon
so has part: feature:3099063-3099106:1:exon
so has part: feature:3099772-3099832:1:exon
so has part: feature:3100927-3100974:1:exon
so has part: feature:3101573-3101638:1:exon
so has part: feature:3103053-3103123:1:exon
so has part: feature:3103518-3103604:1:exon
so has part: feature:3103710-3103878:1:exon
so has part: feature:3104847-3104968:1:exon
so has part: feature:3107591-3107734:1:exon
so has part: feature:3108880-3108967:1:exon
so has part: feature:3109576-3109649:1:exon
so has part: feature:3110865-3111102:1:exon

XP_030138075.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3096402-3096524:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3097403-3097448:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3098127-3098218:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3099063-3099106:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3099772-3099832:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3100927-3100974:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3101573-3101638:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3103053-3103123:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3103518-3103604:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3103710-3103878:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3104847-3104968:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3107591-3107734:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3108880-3108967:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3109576-3109649:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3110865-3111102:1:exon

LOC121470581
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121470581
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3135623..3138496)
location: region:3135623-3138496:-1
so has part: feature:3135623-3138496:-1:exon
subclass of: SO_0000011

121470581
type: Gene
SIO_000068: ncbigene

position:3135623:-1
position: 3135623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3138496:-1
position: 3138496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3135623-3138496:-1:exon

LOC121470581
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC121470581
product: uncharacterized LOC121470581
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_005981647.1
SIO_010081: LOC121470581
subclass of: SO_0000673
so part of: LOC121470581
location: complement(join(3135623..3135875,3136518..3138496))
location: region:3135623-3138496:-1
so has part: feature:3136518-3138496:-1:exon
so has part: feature:3135623-3135875:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3136518-3138496:-1:exon

position:3136518:-1
position: 3136518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3135623-3135875:-1:exon

position:3135875:-1
position: 3135875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NFATC3
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: NFATC3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3138898..3202410
location: region:3138898-3202410:1
so has part: feature:3138898-3202410:1:exon
subclass of: SO_0000010

100229413
type: Gene
SIO_000068: ncbigene

position:3138898:1
position: 3138898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3202410:1
position: 3202410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3138898-3202410:1:exon

NFATC3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: NFATC3
product: nuclear factor of activated T cells 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 23 ESTs, 38 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 52 samples with support for all annotated introns
transcript id: XM_030282093.3
SIO_010081: NFATC3
subclass of: SO_0000673
so part of: NFATC3
location: join(3138898..3139201,3154159..3155278,3163075..3163237,3174811..3175010,3175672..3175844,3176600..3176740,3177966..3178021,3178655..3178781,3180583..3181629,3190184..3190285,3198973..3202410)
location: region:3138898-3202410:1
so has part: feature:3138898-3139201:1:exon
so has part: feature:3154159-3155278:1:exon
so has part: feature:3163075-3163237:1:exon
so has part: feature:3174811-3175010:1:exon
so has part: feature:3175672-3175844:1:exon
so has part: feature:3176600-3176740:1:exon
so has part: feature:3177966-3178021:1:exon
so has part: feature:3178655-3178781:1:exon
so has part: feature:3180583-3181629:1:exon
so has part: feature:3190184-3190285:1:exon
so has part: feature:3198973-3202410:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3138898-3139201:1:exon

position:3139201:1
position: 3139201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3154159-3155278:1:exon

position:3154159:1
position: 3154159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3155278:1
position: 3155278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3163075-3163237:1:exon

position:3163075:1
position: 3163075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3163237:1
position: 3163237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3174811-3175010:1:exon

position:3174811:1
position: 3174811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3175010:1
position: 3175010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3175672-3175844:1:exon

position:3175672:1
position: 3175672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3175844:1
position: 3175844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3176600-3176740:1:exon

position:3176600:1
position: 3176600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3176740:1
position: 3176740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3177966-3178021:1:exon

position:3177966:1
position: 3177966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3178021:1
position: 3178021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3178655-3178781:1:exon

position:3178655:1
position: 3178655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3178781:1
position: 3178781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3180583-3181629:1:exon

position:3180583:1
position: 3180583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3181629:1
position: 3181629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3190184-3190285:1:exon

position:3190184:1
position: 3190184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3190285:1
position: 3190285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3198973-3202410:1:exon

position:3198973:1
position: 3198973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NFATC3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: NFATC3
product: nuclear factor of activated T cells 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 23 ESTs, 35 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 46 samples with support for all annotated introns
transcript id: XM_030282094.3
SIO_010081: NFATC3
subclass of: SO_0000673
so part of: NFATC3
location: join(3138898..3139201,3154159..3155278,3163075..3163237,3174811..3175010,3175672..3175844,3176600..3176740,3177966..3178021,3178655..3178781,3180583..3181629,3198973..3202410)
location: region:3138898-3202410:1
so has part: feature:3138898-3139201:1:exon
so has part: feature:3154159-3155278:1:exon
so has part: feature:3163075-3163237:1:exon
so has part: feature:3174811-3175010:1:exon
so has part: feature:3175672-3175844:1:exon
so has part: feature:3176600-3176740:1:exon
so has part: feature:3177966-3178021:1:exon
so has part: feature:3178655-3178781:1:exon
so has part: feature:3180583-3181629:1:exon
so has part: feature:3198973-3202410:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3138898-3139201:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3154159-3155278:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3163075-3163237:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3174811-3175010:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3175672-3175844:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3176600-3176740:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3177966-3178021:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3178655-3178781:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3180583-3181629:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3198973-3202410:1:exon

NFATC3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: NFATC3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear factor of activated T-cells, cytoplasmic 3 isoform X1
translation: MTTANCGATDEFDFRLIFGEDGQPGPGPPLGPADLESDDCASIYIFNVDQPSSSVNQPICIPRHGLQSHSSPTRFQSLKNYEGTCEVPESKYSPLGGPKPFECPSIQITSISPNCHQGIEANEDELHTNGTENEYMERPSRDHLYLPLEPSYRESSLSPSPASSISSRSWFSDASSCESISHVYDDVDSELNEAAARFTLGSPLASPGGSPRGPSDESWQQPYGFGHALSPRQSPCHSPRTSITDENWLSPRPTSRPSSRPTSPCGKRRHSSAEICYAGSLSPHHSPTPSPGHSPRGSITEDTWLNTSIHNVQGLNSGLSPFQCCTETDIPLKTRKTSEDQTATLSGKIDICPEEQGNLSSSLETAVDDCSGPQHTLKKDLPGDQFLSVPSHFTWNKPKPGHTPIFRTSSLPPLDWPLPSHYGQCELKIEVQPKTHHRAHYETEGSRGAVKASTGGHPVVKLLGYSEKPVNLQMFIGTADDRYLRPHAFYQVHRITGKTVATASQEIIIASTKVLEIPLLPENNMSASIDCAGILKLRNSDIELRKGETDIGRKNTRVRLVFRVHIPQPSGKVLSLQTASIPVECSQRSAQELPQIEKYSINSCSVNGGHEMVVTGSNFLPESKIIFFEKGQDGRPQWEVEGKIIREKCQGANIILEVPPYHNKTITAAVQVQFYLCNGKRKKSQSQRFTYTPVIMKQEHRDEVDLSAVPSLALPHAGSVQGLHSMRAQLPSPEQGHPHDNLLSTSPRSLVCPIQPPYTAMVTSAVPHLPHMQGRNLSPSEECHVLPPAVVQSFQVTSAPPVRPSYQPMQPSDVYNGQPGLPMNSASGQGFDAISFPQDTAVPHLINLSCQALPPVQFHSSNPGSVSASSPAGHALAHAAHSGQSSAHLPSMGFHCPGAGQGSLPPAMSRSLGQASPQLQQVPYHSPNPAAASSPSPTASHPLGPAPLSGPSSPQLQPLPYQSPSSGPAPSPPPAARSGQHSPQAASPALAALGTVSPLGPHPVCDSSPFAPEAAAVHIKPEPEDRELNFQTIGLQDITLDDDSFISDLEYQPSGSTEKWTQHSALMSNSFVENLEVNEIIGRDMSQISVSHVTSQPARTCPGSLETRVSDGIQ
SIO_010081: NFATC3
subclass of: SO_0000673
so part of: NFATC3
location: join(3139102..3139201,3154159..3155278,3163075..3163237,3174811..3175010,3175672..3175844,3176600..3176740,3177966..3178021,3178655..3178781,3180583..3181629,3190184..3190285,3198973..3199088)
location: region:3139102-3199088:1
so has part: feature:3139102-3139201:1:exon
so has part: feature:3154159-3155278:1:exon
so has part: feature:3163075-3163237:1:exon
so has part: feature:3174811-3175010:1:exon
so has part: feature:3175672-3175844:1:exon
so has part: feature:3176600-3176740:1:exon
so has part: feature:3177966-3178021:1:exon
so has part: feature:3178655-3178781:1:exon
so has part: feature:3180583-3181629:1:exon
so has part: feature:3190184-3190285:1:exon
so has part: feature:3198973-3199088:1:exon

XP_030137953.3
type: Protein
SIO_000068: ncbiprotein

position:3139102:1
position: 3139102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3199088:1
position: 3199088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3139102-3139201:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3154159-3155278:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3163075-3163237:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3174811-3175010:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3175672-3175844:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3176600-3176740:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3177966-3178021:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3178655-3178781:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3180583-3181629:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3190184-3190285:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3198973-3199088:1:exon

NFATC3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: NFATC3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear factor of activated T-cells, cytoplasmic 3 isoform X2
translation: MTTANCGATDEFDFRLIFGEDGQPGPGPPLGPADLESDDCASIYIFNVDQPSSSVNQPICIPRHGLQSHSSPTRFQSLKNYEGTCEVPESKYSPLGGPKPFECPSIQITSISPNCHQGIEANEDELHTNGTENEYMERPSRDHLYLPLEPSYRESSLSPSPASSISSRSWFSDASSCESISHVYDDVDSELNEAAARFTLGSPLASPGGSPRGPSDESWQQPYGFGHALSPRQSPCHSPRTSITDENWLSPRPTSRPSSRPTSPCGKRRHSSAEICYAGSLSPHHSPTPSPGHSPRGSITEDTWLNTSIHNVQGLNSGLSPFQCCTETDIPLKTRKTSEDQTATLSGKIDICPEEQGNLSSSLETAVDDCSGPQHTLKKDLPGDQFLSVPSHFTWNKPKPGHTPIFRTSSLPPLDWPLPSHYGQCELKIEVQPKTHHRAHYETEGSRGAVKASTGGHPVVKLLGYSEKPVNLQMFIGTADDRYLRPHAFYQVHRITGKTVATASQEIIIASTKVLEIPLLPENNMSASIDCAGILKLRNSDIELRKGETDIGRKNTRVRLVFRVHIPQPSGKVLSLQTASIPVECSQRSAQELPQIEKYSINSCSVNGGHEMVVTGSNFLPESKIIFFEKGQDGRPQWEVEGKIIREKCQGANIILEVPPYHNKTITAAVQVQFYLCNGKRKKSQSQRFTYTPVIMKQEHRDEVDLSAVPSLALPHAGSVQGLHSMRAQLPSPEQGHPHDNLLSTSPRSLVCPIQPPYTAMVTSAVPHLPHMQGRNLSPSEECHVLPPAVVQSFQVTSAPPVRPSYQPMQPSDVYNGQPGLPMNSASGQGFDAISFPQDTAVPHLINLSCQALPPVQFHSSNPGSVSASSPAGHALAHAAHSGQSSAHLPSMGFHCPGAGQGSLPPAMSRSLGQASPQLQQVPYHSPNPAAASSPSPTASHPLGPAPLSGPSSPQLQPLPYQSPSSGPAPSPPPAARSGQHSPQAASPALAALGTVSPLGPHPVCDSSPFAPEAAAVHIKPEPEDRELNFQTIGLQDITLDDVNEIIGRDMSQISVSHVTSQPARTCPGSLETRVSDGIQ
SIO_010081: NFATC3
subclass of: SO_0000673
so part of: NFATC3
location: join(3139102..3139201,3154159..3155278,3163075..3163237,3174811..3175010,3175672..3175844,3176600..3176740,3177966..3178021,3178655..3178781,3180583..3181629,3198973..3199088)
location: region:3139102-3199088:1
so has part: feature:3139102-3139201:1:exon
so has part: feature:3154159-3155278:1:exon
so has part: feature:3163075-3163237:1:exon
so has part: feature:3174811-3175010:1:exon
so has part: feature:3175672-3175844:1:exon
so has part: feature:3176600-3176740:1:exon
so has part: feature:3177966-3178021:1:exon
so has part: feature:3178655-3178781:1:exon
so has part: feature:3180583-3181629:1:exon
so has part: feature:3198973-3199088:1:exon

XP_030137954.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3139102-3139201:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3154159-3155278:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3163075-3163237:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3174811-3175010:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3175672-3175844:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3176600-3176740:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3177966-3178021:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3178655-3178781:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3180583-3181629:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3198973-3199088:1:exon

LOC115496759
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC115496759
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3215913..3217605)
location: region:3215913-3217605:-1
so has part: feature:3215913-3217605:-1:exon
subclass of: SO_0000011

115496759
type: Gene
SIO_000068: ncbigene

position:3215913:-1
position: 3215913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3217605:-1
position: 3217605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3215913-3217605:-1:exon

LOC115496759
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC115496759
product: uncharacterized LOC115496759
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_003962279.3
SIO_010081: LOC115496759
subclass of: SO_0000673
so part of: LOC115496759
location: complement(join(3215913..3216622,3217196..3217605))
location: region:3215913-3217605:-1
so has part: feature:3217196-3217605:-1:exon
so has part: feature:3215913-3216622:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3217196-3217605:-1:exon

position:3217196:-1
position: 3217196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3215913-3216622:-1:exon

position:3216622:-1
position: 3216622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ESRP2
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: ESRP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3219993..3307755)
location: region:3219993-3307755:-1
so has part: feature:3219993-3307755:-1:exon
subclass of: SO_0000010

100224706
type: Gene
SIO_000068: ncbigene

position:3219993:-1
position: 3219993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3307755:-1
position: 3307755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3219993-3307755:-1:exon

ESRP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: ESRP2
product: epithelial splicing regulatory protein 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030282669.3
SIO_010081: ESRP2
subclass of: SO_0000673
so part of: ESRP2
location: complement(join(3219993..3221361,3231659..3231836,3232768..3232963,3234174..3234372,3235714..3235935,3237889..3238190,3238685..3238727,3238922..3239054,3239880..3239990,3240782..3240836,3240958..3241056,3241789..3241903,3242935..3243048,3260372..3260500,3261390..3261542,3264735..3264816,3270756..3270879,3273065..3273189,3278527..3278660,3281084..3281164,3296066..3296168,3299022..3299106,3307572..3307755))
location: region:3219993-3307755:-1
so has part: feature:3307572-3307755:-1:exon
so has part: feature:3299022-3299106:-1:exon
so has part: feature:3296066-3296168:-1:exon
so has part: feature:3281084-3281164:-1:exon
so has part: feature:3278527-3278660:-1:exon
so has part: feature:3273065-3273189:-1:exon
so has part: feature:3270756-3270879:-1:exon
so has part: feature:3264735-3264816:-1:exon
so has part: feature:3261390-3261542:-1:exon
so has part: feature:3260372-3260500:-1:exon
so has part: feature:3242935-3243048:-1:exon
so has part: feature:3241789-3241903:-1:exon
so has part: feature:3240958-3241056:-1:exon
so has part: feature:3240782-3240836:-1:exon
so has part: feature:3239880-3239990:-1:exon
so has part: feature:3238922-3239054:-1:exon
so has part: feature:3238685-3238727:-1:exon
so has part: feature:3237889-3238190:-1:exon
so has part: feature:3235714-3235935:-1:exon
so has part: feature:3234174-3234372:-1:exon
so has part: feature:3232768-3232963:-1:exon
so has part: feature:3231659-3231836:-1:exon
so has part: feature:3219993-3221361:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3307572-3307755:-1:exon

position:3307572:-1
position: 3307572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3299022-3299106:-1:exon

position:3299022:-1
position: 3299022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3299106:-1
position: 3299106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3296066-3296168:-1:exon

position:3296066:-1
position: 3296066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3296168:-1
position: 3296168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3281084-3281164:-1:exon

position:3281084:-1
position: 3281084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3281164:-1
position: 3281164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3278527-3278660:-1:exon

position:3278527:-1
position: 3278527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3278660:-1
position: 3278660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3273065-3273189:-1:exon

position:3273065:-1
position: 3273065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3273189:-1
position: 3273189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3270756-3270879:-1:exon

position:3270756:-1
position: 3270756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3270879:-1
position: 3270879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3264735-3264816:-1:exon

position:3264735:-1
position: 3264735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3264816:-1
position: 3264816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3261390-3261542:-1:exon

position:3261390:-1
position: 3261390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3261542:-1
position: 3261542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3260372-3260500:-1:exon

position:3260372:-1
position: 3260372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3260500:-1
position: 3260500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3242935-3243048:-1:exon

position:3242935:-1
position: 3242935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3243048:-1
position: 3243048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3241789-3241903:-1:exon

position:3241789:-1
position: 3241789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3241903:-1
position: 3241903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3240958-3241056:-1:exon

position:3240958:-1
position: 3240958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3241056:-1
position: 3241056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3240782-3240836:-1:exon

position:3240782:-1
position: 3240782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3240836:-1
position: 3240836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3239880-3239990:-1:exon

position:3239880:-1
position: 3239880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3239990:-1
position: 3239990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3238922-3239054:-1:exon

position:3238922:-1
position: 3238922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3239054:-1
position: 3239054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3238685-3238727:-1:exon

position:3238685:-1
position: 3238685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3238727:-1
position: 3238727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3237889-3238190:-1:exon

position:3237889:-1
position: 3237889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3238190:-1
position: 3238190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:3235714-3235935:-1:exon

position:3235714:-1
position: 3235714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3235935:-1
position: 3235935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:3234174-3234372:-1:exon

position:3234174:-1
position: 3234174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3234372:-1
position: 3234372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:3232768-3232963:-1:exon

position:3232768:-1
position: 3232768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3232963:-1
position: 3232963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:3231659-3231836:-1:exon

position:3231659:-1
position: 3231659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3231836:-1
position: 3231836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:3219993-3221361:-1:exon

position:3221361:-1
position: 3221361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ESRP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: ESRP2
product: epithelial splicing regulatory protein 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030282671.3
SIO_010081: ESRP2
subclass of: SO_0000673
so part of: ESRP2
location: complement(join(3219993..3221361,3231659..3231836,3232768..3232963,3234186..3234372,3235714..3235935,3237889..3238190,3238685..3238727,3238922..3239054,3239880..3239990,3240782..3240836,3240958..3241056,3241789..3241903,3242935..3243048,3260372..3260500,3261390..3261542,3261821..3262844))
location: region:3219993-3262844:-1
so has part: feature:3261821-3262844:-1:exon
so has part: feature:3261390-3261542:-1:exon
so has part: feature:3260372-3260500:-1:exon
so has part: feature:3242935-3243048:-1:exon
so has part: feature:3241789-3241903:-1:exon
so has part: feature:3240958-3241056:-1:exon
so has part: feature:3240782-3240836:-1:exon
so has part: feature:3239880-3239990:-1:exon
so has part: feature:3238922-3239054:-1:exon
so has part: feature:3238685-3238727:-1:exon
so has part: feature:3237889-3238190:-1:exon
so has part: feature:3235714-3235935:-1:exon
so has part: feature:3234186-3234372:-1:exon
so has part: feature:3232768-3232963:-1:exon
so has part: feature:3231659-3231836:-1:exon
so has part: feature:3219993-3221361:-1:exon

position:3262844:-1
position: 3262844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3261821-3262844:-1:exon

position:3261821:-1
position: 3261821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3261390-3261542:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3260372-3260500:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3242935-3243048:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3241789-3241903:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3240958-3241056:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3240782-3240836:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3239880-3239990:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3238922-3239054:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3238685-3238727:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3237889-3238190:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3235714-3235935:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3234186-3234372:-1:exon

position:3234186:-1
position: 3234186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3232768-3232963:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3231659-3231836:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3219993-3221361:-1:exon

ESRP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: ESRP2
product: epithelial splicing regulatory protein 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 1 long SRA read, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030282670.3
SIO_010081: ESRP2
subclass of: SO_0000673
so part of: ESRP2
location: complement(join(3219993..3221361,3231659..3231836,3232768..3232963,3234174..3234372,3235714..3235935,3237889..3238190,3238685..3238727,3238922..3239054,3239880..3239990,3240782..3240836,3240964..3241056,3241789..3241903,3242935..3243048,3260372..3260500,3261390..3261542,3261821..3262834))
location: region:3219993-3262834:-1
so has part: feature:3261821-3262834:-1:exon
so has part: feature:3261390-3261542:-1:exon
so has part: feature:3260372-3260500:-1:exon
so has part: feature:3242935-3243048:-1:exon
so has part: feature:3241789-3241903:-1:exon
so has part: feature:3240964-3241056:-1:exon
so has part: feature:3240782-3240836:-1:exon
so has part: feature:3239880-3239990:-1:exon
so has part: feature:3238922-3239054:-1:exon
so has part: feature:3238685-3238727:-1:exon
so has part: feature:3237889-3238190:-1:exon
so has part: feature:3235714-3235935:-1:exon
so has part: feature:3234174-3234372:-1:exon
so has part: feature:3232768-3232963:-1:exon
so has part: feature:3231659-3231836:-1:exon
so has part: feature:3219993-3221361:-1:exon

position:3262834:-1
position: 3262834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3261821-3262834:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3261390-3261542:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3260372-3260500:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3242935-3243048:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3241789-3241903:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3240964-3241056:-1:exon

position:3240964:-1
position: 3240964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3240782-3240836:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3239880-3239990:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3238922-3239054:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3238685-3238727:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3237889-3238190:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3235714-3235935:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3234174-3234372:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3232768-3232963:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3231659-3231836:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3219993-3221361:-1:exon

ESRP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: ESRP2
product: epithelial splicing regulatory protein 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030282668.3
SIO_010081: ESRP2
subclass of: SO_0000673
so part of: ESRP2
location: complement(join(3219993..3221361,3231659..3231836,3232768..3232963,3234174..3234372,3235714..3235935,3237889..3238190,3238685..3238727,3238922..3239054,3239880..3239990,3240782..3240836,3240958..3241056,3241789..3241903,3242935..3243048,3260372..3260500,3261390..3261542,3261821..3262834))
location: region:3219993-3262834:-1
so has part: feature:3261821-3262834:-1:exon
so has part: feature:3261390-3261542:-1:exon
so has part: feature:3260372-3260500:-1:exon
so has part: feature:3242935-3243048:-1:exon
so has part: feature:3241789-3241903:-1:exon
so has part: feature:3240958-3241056:-1:exon
so has part: feature:3240782-3240836:-1:exon
so has part: feature:3239880-3239990:-1:exon
so has part: feature:3238922-3239054:-1:exon
so has part: feature:3238685-3238727:-1:exon
so has part: feature:3237889-3238190:-1:exon
so has part: feature:3235714-3235935:-1:exon
so has part: feature:3234174-3234372:-1:exon
so has part: feature:3232768-3232963:-1:exon
so has part: feature:3231659-3231836:-1:exon
so has part: feature:3219993-3221361:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3261821-3262834:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3261390-3261542:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3260372-3260500:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3242935-3243048:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3241789-3241903:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3240958-3241056:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3240782-3240836:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3239880-3239990:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3238922-3239054:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3238685-3238727:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3237889-3238190:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3235714-3235935:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3234174-3234372:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3232768-3232963:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3231659-3231836:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3219993-3221361:-1:exon

ESRP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: ESRP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: epithelial splicing regulatory protein 2 isoform X2
translation: MTASHSDSLVVLFGATAGAYGAKLGSDERELILLVWQVVDLQNKKVGTLHKSLVKADNLDLSDQCREVSGLTPEGLSKAEPLDRVLQQFSQLVSSDLKVLGRSSYTLCSDGQLLIRQVLHPETSKKNYLLSDCFYSFYDLRKEFHTCYPSSAAVKDQTIKTMAEYLGLGTDEAEEDFGVWQVKTMVAIIFSMLSEDHVFTEPETVKHKYETGPCSKSETVDSETVIRARGLPWQSSDQDIARFFKGLNIAKGGVALCLNSQGRRNGEALVRFVNSEQRDLALERHKHHMGSRYIEVYKATGEEFLKIAGGTSNEVAQFLSKENQVIIRMRGLPFTATQEDVLGFLGSECPVTGGKEGLLFVKYPDGRPTGDAFVLFSCEEYAQNALKKHKEILGKRYIELFRSTAAEVQQVLNRYMSTPLIPTLPTPIIPVIPPPYTIATGSIRDCVRLRGLPYTAGIDDILEFMGDATGDIKPHGVHMVLNQQGRPSGDAFIQMKSADKAFMVAQKCHKKMMKDRYVEVFQCSGEEMNFVLMGGTLNRSGLSPPPCKLPCLSPPAYAAFQTAAVIPAEAAALYQPQALLPSTRTPQASAAAPPAVTYYPAQAAQLYMNYTAYYPSPPVSPTTVGYIAAPPGAVAAAATATHTPILPQPGALVRMQGLPYNTGMKEILSFFQGYQLQADSILMLYNFSGQPSGEALVTFPSLDLAKQAVAERNGQLLGSRCVQLYLV
SIO_010081: ESRP2
subclass of: SO_0000673
so part of: ESRP2
location: complement(join(3221203..3221361,3231659..3231836,3232768..3232963,3234174..3234372,3235714..3235935,3237889..3238190,3238685..3238727,3238922..3239054,3239880..3239990,3240782..3240836,3240964..3241056,3241789..3241903,3242935..3243048,3260372..3260500,3261390..3261524))
location: region:3221203-3261524:-1
so has part: feature:3261390-3261524:-1:exon
so has part: feature:3260372-3260500:-1:exon
so has part: feature:3242935-3243048:-1:exon
so has part: feature:3241789-3241903:-1:exon
so has part: feature:3240964-3241056:-1:exon
so has part: feature:3240782-3240836:-1:exon
so has part: feature:3239880-3239990:-1:exon
so has part: feature:3238922-3239054:-1:exon
so has part: feature:3238685-3238727:-1:exon
so has part: feature:3237889-3238190:-1:exon
so has part: feature:3235714-3235935:-1:exon
so has part: feature:3234174-3234372:-1:exon
so has part: feature:3232768-3232963:-1:exon
so has part: feature:3231659-3231836:-1:exon
so has part: feature:3221203-3221361:-1:exon

XP_030138530.1
type: Protein
SIO_000068: ncbiprotein

position:3221203:-1
position: 3221203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3261524:-1
position: 3261524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3261390-3261524:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3260372-3260500:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3242935-3243048:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3241789-3241903:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3240964-3241056:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3240782-3240836:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3239880-3239990:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3238922-3239054:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3238685-3238727:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3237889-3238190:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3235714-3235935:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3234174-3234372:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3232768-3232963:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3231659-3231836:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3221203-3221361:-1:exon

ESRP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: ESRP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: epithelial splicing regulatory protein 2 isoform X3
translation: MTASHSDSLVVLFGATAGAYGAKLGSDERELILLVWQVVDLQNKKVGTLHKSLVKADNLDLSDQCREVSGLTPEGLSKAEPLDRVLQQFSQLVSSDLKVLGRSSYTLCSDGQLLIRQVLHPETSKKNYLLSDCFYSFYDLRKEFHTCYPSSAAVKDQTIKTMAEYLGLGTDEAEEDFGVWQVKTMVAIIFSMLSEGCNHVFTEPETVKHKYETGPCSKSETVDSETVIRARGLPWQSSDQDIARFFKGLNIAKGGVALCLNSQGRRNGEALVRFVNSEQRDLALERHKHHMGSRYIEVYKATGEEFLKIAGGTSNEVAQFLSKENQVIIRMRGLPFTATQEDVLGFLGSECPVTGGKEGLLFVKYPDGRPTGDAFVLFSCEEYAQNALKKHKEILGKRYIELFRSTAAEVQQVLNRYMSTPLIPTLPTPIIPVIPPPYTIATGSIRDCVRLRGLPYTAGIDDILEFMGDATGDIKPHGVHMVLNQQGRPSGDAFIQMKSADKAFMVAQKCHKKMMKDRYVEVFQCSGEEMNFVLMGGTLNRSGLSPPPCLSPPAYAAFQTAAVIPAEAAALYQPQALLPSTRTPQASAAAPPAVTYYPAQAAQLYMNYTAYYPSPPVSPTTVGYIAAPPGAVAAAATATHTPILPQPGALVRMQGLPYNTGMKEILSFFQGYQLQADSILMLYNFSGQPSGEALVTFPSLDLAKQAVAERNGQLLGSRCVQLYLV
SIO_010081: ESRP2
subclass of: SO_0000673
so part of: ESRP2
location: complement(join(3221203..3221361,3231659..3231836,3232768..3232963,3234186..3234372,3235714..3235935,3237889..3238190,3238685..3238727,3238922..3239054,3239880..3239990,3240782..3240836,3240958..3241056,3241789..3241903,3242935..3243048,3260372..3260500,3261390..3261524))
location: region:3221203-3261524:-1
so has part: feature:3261390-3261524:-1:exon
so has part: feature:3260372-3260500:-1:exon
so has part: feature:3242935-3243048:-1:exon
so has part: feature:3241789-3241903:-1:exon
so has part: feature:3240958-3241056:-1:exon
so has part: feature:3240782-3240836:-1:exon
so has part: feature:3239880-3239990:-1:exon
so has part: feature:3238922-3239054:-1:exon
so has part: feature:3238685-3238727:-1:exon
so has part: feature:3237889-3238190:-1:exon
so has part: feature:3235714-3235935:-1:exon
so has part: feature:3234186-3234372:-1:exon
so has part: feature:3232768-3232963:-1:exon
so has part: feature:3231659-3231836:-1:exon
so has part: feature:3221203-3221361:-1:exon

XP_030138531.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3261390-3261524:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3260372-3260500:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3242935-3243048:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3241789-3241903:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3240958-3241056:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3240782-3240836:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3239880-3239990:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3238922-3239054:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3238685-3238727:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3237889-3238190:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3235714-3235935:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3234186-3234372:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3232768-3232963:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3231659-3231836:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3221203-3221361:-1:exon

ESRP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: ESRP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: epithelial splicing regulatory protein 2 isoform X1
translation: MTASHSDSLVVLFGATAGAYGAKLGSDERELILLVWQVVDLQNKKVGTLHKSLVKADNLDLSDQCREVSGLTPEGLSKAEPLDRVLQQFSQLVSSDLKVLGRSSYTLCSDGQLLIRQVLHPETSKKNYLLSDCFYSFYDLRKEFHTCYPSSAAVKDQTIKTMAEYLGLGTDEAEEDFGVWQVKTMVAIIFSMLSEGCNHVFTEPETVKHKYETGPCSKSETVDSETVIRARGLPWQSSDQDIARFFKGLNIAKGGVALCLNSQGRRNGEALVRFVNSEQRDLALERHKHHMGSRYIEVYKATGEEFLKIAGGTSNEVAQFLSKENQVIIRMRGLPFTATQEDVLGFLGSECPVTGGKEGLLFVKYPDGRPTGDAFVLFSCEEYAQNALKKHKEILGKRYIELFRSTAAEVQQVLNRYMSTPLIPTLPTPIIPVIPPPYTIATGSIRDCVRLRGLPYTAGIDDILEFMGDATGDIKPHGVHMVLNQQGRPSGDAFIQMKSADKAFMVAQKCHKKMMKDRYVEVFQCSGEEMNFVLMGGTLNRSGLSPPPCKLPCLSPPAYAAFQTAAVIPAEAAALYQPQALLPSTRTPQASAAAPPAVTYYPAQAAQLYMNYTAYYPSPPVSPTTVGYIAAPPGAVAAAATATHTPILPQPGALVRMQGLPYNTGMKEILSFFQGYQLQADSILMLYNFSGQPSGEALVTFPSLDLAKQAVAERNGQLLGSRCVQLYLV
SIO_010081: ESRP2
subclass of: SO_0000673
so part of: ESRP2
location: complement(join(3221203..3221361,3231659..3231836,3232768..3232963,3234174..3234372,3235714..3235935,3237889..3238190,3238685..3238727,3238922..3239054,3239880..3239990,3240782..3240836,3240958..3241056,3241789..3241903,3242935..3243048,3260372..3260500,3261390..3261524))
location: region:3221203-3261524:-1
so has part: feature:3261390-3261524:-1:exon
so has part: feature:3260372-3260500:-1:exon
so has part: feature:3242935-3243048:-1:exon
so has part: feature:3241789-3241903:-1:exon
so has part: feature:3240958-3241056:-1:exon
so has part: feature:3240782-3240836:-1:exon
so has part: feature:3239880-3239990:-1:exon
so has part: feature:3238922-3239054:-1:exon
so has part: feature:3238685-3238727:-1:exon
so has part: feature:3237889-3238190:-1:exon
so has part: feature:3235714-3235935:-1:exon
so has part: feature:3234174-3234372:-1:exon
so has part: feature:3232768-3232963:-1:exon
so has part: feature:3231659-3231836:-1:exon
so has part: feature:3221203-3221361:-1:exon

XP_030138528.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3261390-3261524:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3260372-3260500:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3242935-3243048:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3241789-3241903:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3240958-3241056:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3240782-3240836:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3239880-3239990:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3238922-3239054:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3238685-3238727:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3237889-3238190:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3235714-3235935:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3234174-3234372:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3232768-3232963:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3231659-3231836:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3221203-3221361:-1:exon

ESRP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: ESRP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: epithelial splicing regulatory protein 2 isoform X1
translation: MTASHSDSLVVLFGATAGAYGAKLGSDERELILLVWQVVDLQNKKVGTLHKSLVKADNLDLSDQCREVSGLTPEGLSKAEPLDRVLQQFSQLVSSDLKVLGRSSYTLCSDGQLLIRQVLHPETSKKNYLLSDCFYSFYDLRKEFHTCYPSSAAVKDQTIKTMAEYLGLGTDEAEEDFGVWQVKTMVAIIFSMLSEGCNHVFTEPETVKHKYETGPCSKSETVDSETVIRARGLPWQSSDQDIARFFKGLNIAKGGVALCLNSQGRRNGEALVRFVNSEQRDLALERHKHHMGSRYIEVYKATGEEFLKIAGGTSNEVAQFLSKENQVIIRMRGLPFTATQEDVLGFLGSECPVTGGKEGLLFVKYPDGRPTGDAFVLFSCEEYAQNALKKHKEILGKRYIELFRSTAAEVQQVLNRYMSTPLIPTLPTPIIPVIPPPYTIATGSIRDCVRLRGLPYTAGIDDILEFMGDATGDIKPHGVHMVLNQQGRPSGDAFIQMKSADKAFMVAQKCHKKMMKDRYVEVFQCSGEEMNFVLMGGTLNRSGLSPPPCKLPCLSPPAYAAFQTAAVIPAEAAALYQPQALLPSTRTPQASAAAPPAVTYYPAQAAQLYMNYTAYYPSPPVSPTTVGYIAAPPGAVAAAATATHTPILPQPGALVRMQGLPYNTGMKEILSFFQGYQLQADSILMLYNFSGQPSGEALVTFPSLDLAKQAVAERNGQLLGSRCVQLYLV
SIO_010081: ESRP2
subclass of: SO_0000673
so part of: ESRP2
location: complement(join(3221203..3221361,3231659..3231836,3232768..3232963,3234174..3234372,3235714..3235935,3237889..3238190,3238685..3238727,3238922..3239054,3239880..3239990,3240782..3240836,3240958..3241056,3241789..3241903,3242935..3243048,3260372..3260500,3261390..3261524))
location: region:3221203-3261524:-1
so has part: feature:3261390-3261524:-1:exon
so has part: feature:3260372-3260500:-1:exon
so has part: feature:3242935-3243048:-1:exon
so has part: feature:3241789-3241903:-1:exon
so has part: feature:3240958-3241056:-1:exon
so has part: feature:3240782-3240836:-1:exon
so has part: feature:3239880-3239990:-1:exon
so has part: feature:3238922-3239054:-1:exon
so has part: feature:3238685-3238727:-1:exon
so has part: feature:3237889-3238190:-1:exon
so has part: feature:3235714-3235935:-1:exon
so has part: feature:3234174-3234372:-1:exon
so has part: feature:3232768-3232963:-1:exon
so has part: feature:3231659-3231836:-1:exon
so has part: feature:3221203-3221361:-1:exon

XP_030138529.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3261390-3261524:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3260372-3260500:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3242935-3243048:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3241789-3241903:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3240958-3241056:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3240782-3240836:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3239880-3239990:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3238922-3239054:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3238685-3238727:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3237889-3238190:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3235714-3235935:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3234174-3234372:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3232768-3232963:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3231659-3231836:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3221203-3221361:-1:exon

ESRP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: ESRP2
product: epithelial splicing regulatory protein 2, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_002191859.6
SIO_010081: ESRP2
subclass of: SO_0000673
so part of: ESRP2
location: complement(join(3221257..3221361,3224240..3224351,3231659..3231836,3232768..3232963,3234186..3234372,3235714..3235935,3237889..3238190,3238685..3238727,3238922..3239054,3239880..3239990,3240782..3240836,3240958..3241056,3241789..3241903,3242935..3243048,3260372..3260500,3261390..3261542,3261821..3262837))
location: region:3221257-3262837:-1
so has part: feature:3261821-3262837:-1:exon
so has part: feature:3261390-3261542:-1:exon
so has part: feature:3260372-3260500:-1:exon
so has part: feature:3242935-3243048:-1:exon
so has part: feature:3241789-3241903:-1:exon
so has part: feature:3240958-3241056:-1:exon
so has part: feature:3240782-3240836:-1:exon
so has part: feature:3239880-3239990:-1:exon
so has part: feature:3238922-3239054:-1:exon
so has part: feature:3238685-3238727:-1:exon
so has part: feature:3237889-3238190:-1:exon
so has part: feature:3235714-3235935:-1:exon
so has part: feature:3234186-3234372:-1:exon
so has part: feature:3232768-3232963:-1:exon
so has part: feature:3231659-3231836:-1:exon
so has part: feature:3224240-3224351:-1:exon
so has part: feature:3221257-3221361:-1:exon

position:3221257:-1
position: 3221257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3262837:-1
position: 3262837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3261821-3262837:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3261390-3261542:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3260372-3260500:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3242935-3243048:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3241789-3241903:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3240958-3241056:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3240782-3240836:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3239880-3239990:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3238922-3239054:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3238685-3238727:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3237889-3238190:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3235714-3235935:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3234186-3234372:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3232768-3232963:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3231659-3231836:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3224240-3224351:-1:exon

position:3224240:-1
position: 3224240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3224351:-1
position: 3224351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3221257-3221361:-1:exon

ESRP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: ESRP2
product: epithelial splicing regulatory protein 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_012570230.4
SIO_010081: ESRP2
subclass of: SO_0000673
so part of: ESRP2
location: complement(join(3221257..3221361,3224240..3224351,3231659..3231836,3232768..3232963,3234174..3234372,3235714..3235935,3237889..3238190,3238685..3238727,3238922..3239054,3239880..3239990,3240782..3240836,3240958..3241056,3241789..3241903,3242935..3243048,3260372..3260500,3261390..3261542,3261821..3262831))
location: region:3221257-3262831:-1
so has part: feature:3261821-3262831:-1:exon
so has part: feature:3261390-3261542:-1:exon
so has part: feature:3260372-3260500:-1:exon
so has part: feature:3242935-3243048:-1:exon
so has part: feature:3241789-3241903:-1:exon
so has part: feature:3240958-3241056:-1:exon
so has part: feature:3240782-3240836:-1:exon
so has part: feature:3239880-3239990:-1:exon
so has part: feature:3238922-3239054:-1:exon
so has part: feature:3238685-3238727:-1:exon
so has part: feature:3237889-3238190:-1:exon
so has part: feature:3235714-3235935:-1:exon
so has part: feature:3234174-3234372:-1:exon
so has part: feature:3232768-3232963:-1:exon
so has part: feature:3231659-3231836:-1:exon
so has part: feature:3224240-3224351:-1:exon
so has part: feature:3221257-3221361:-1:exon

position:3262831:-1
position: 3262831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3261821-3262831:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3261390-3261542:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3260372-3260500:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3242935-3243048:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3241789-3241903:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3240958-3241056:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3240782-3240836:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3239880-3239990:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3238922-3239054:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3238685-3238727:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3237889-3238190:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3235714-3235935:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3234174-3234372:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3232768-3232963:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3231659-3231836:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3224240-3224351:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3221257-3221361:-1:exon

ESRP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: ESRP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: epithelial splicing regulatory protein 2 isoform X5
translation: MTASHSDSLVVLFGATAGAYGAKLGSDERELILLVWQVVDLQNKKVGTLHKSLVKADNLDLSDQCREVSGLTPEGLSKAEPLDRVLQQFSQLVSSDLKVLGRSSYTLCSDGQLLIRQVLHPETSKKNYLLSDCFYSFYDLRKEFHTCYPSSAAVKDQTIKTMAEYLGLGTDEAEEDFGVWQVKTMVAIIFSMLSEGCNHVFTEPETVKHKYETGPCSKSETVDSETVIRARGLPWQSSDQDIARFFKGLNIAKGGVALCLNSQGRRNGEALVRFVNSEQRDLALERHKHHMGSRYIEVYKATGEEFLKIAGGTSNEVAQFLSKENQVIIRMRGLPFTATQEDVLGFLGSECPVTGGKEGLLFVKYPDGRPTGDAFVLFSCEEYAQNALKKHKEILGKRYIELFRSTAAEVQQVLNRYMSTPLIPTLPTPIIPVIPPPYTIATGSIRDCVRLRGLPYTAGIDDILEFMGDATGDIKPHGVHMVLNQQGRPSGDAFIQMKSADKAFMVAQKCHKKMMKDRYVEVFQCSGEEMNFVLMGGTLNRSGLSPPPCLSPPAYAAFQTAAVIPAEAAALYQPQALLPSTRTPQASAAAPPAVTYYPAQAAQLYMNYTAYYPSPPVSPTTVGYIAAPPGAVAAAATATHTPILPQPGALVRMQGLPYNTGMKEILSFFQGYQYAPDDYNGLIQLSDQARSVLQAPKEWVCL
SIO_010081: ESRP2
subclass of: SO_0000673
so part of: ESRP2
location: complement(join(3224262..3224351,3231659..3231836,3232768..3232963,3234186..3234372,3235714..3235935,3237889..3238190,3238685..3238727,3238922..3239054,3239880..3239990,3240782..3240836,3240958..3241056,3241789..3241903,3242935..3243048,3260372..3260500,3261390..3261524))
location: region:3224262-3261524:-1
so has part: feature:3261390-3261524:-1:exon
so has part: feature:3260372-3260500:-1:exon
so has part: feature:3242935-3243048:-1:exon
so has part: feature:3241789-3241903:-1:exon
so has part: feature:3240958-3241056:-1:exon
so has part: feature:3240782-3240836:-1:exon
so has part: feature:3239880-3239990:-1:exon
so has part: feature:3238922-3239054:-1:exon
so has part: feature:3238685-3238727:-1:exon
so has part: feature:3237889-3238190:-1:exon
so has part: feature:3235714-3235935:-1:exon
so has part: feature:3234186-3234372:-1:exon
so has part: feature:3232768-3232963:-1:exon
so has part: feature:3231659-3231836:-1:exon
so has part: feature:3224262-3224351:-1:exon

XP_002191895.2
type: Protein
SIO_000068: ncbiprotein

position:3224262:-1
position: 3224262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3261390-3261524:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3260372-3260500:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3242935-3243048:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3241789-3241903:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3240958-3241056:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3240782-3240836:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3239880-3239990:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3238922-3239054:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3238685-3238727:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3237889-3238190:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3235714-3235935:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3234186-3234372:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3232768-3232963:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3231659-3231836:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3224262-3224351:-1:exon

ESRP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: ESRP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: epithelial splicing regulatory protein 2 isoform X4
translation: MTASHSDSLVVLFGATAGAYGAKLGSDERELILLVWQVVDLQNKKVGTLHKSLVKADNLDLSDQCREVSGLTPEGLSKAEPLDRVLQQFSQLVSSDLKVLGRSSYTLCSDGQLLIRQVLHPETSKKNYLLSDCFYSFYDLRKEFHTCYPSSAAVKDQTIKTMAEYLGLGTDEAEEDFGVWQVKTMVAIIFSMLSEGCNHVFTEPETVKHKYETGPCSKSETVDSETVIRARGLPWQSSDQDIARFFKGLNIAKGGVALCLNSQGRRNGEALVRFVNSEQRDLALERHKHHMGSRYIEVYKATGEEFLKIAGGTSNEVAQFLSKENQVIIRMRGLPFTATQEDVLGFLGSECPVTGGKEGLLFVKYPDGRPTGDAFVLFSCEEYAQNALKKHKEILGKRYIELFRSTAAEVQQVLNRYMSTPLIPTLPTPIIPVIPPPYTIATGSIRDCVRLRGLPYTAGIDDILEFMGDATGDIKPHGVHMVLNQQGRPSGDAFIQMKSADKAFMVAQKCHKKMMKDRYVEVFQCSGEEMNFVLMGGTLNRSGLSPPPCKLPCLSPPAYAAFQTAAVIPAEAAALYQPQALLPSTRTPQASAAAPPAVTYYPAQAAQLYMNYTAYYPSPPVSPTTVGYIAAPPGAVAAAATATHTPILPQPGALVRMQGLPYNTGMKEILSFFQGYQYAPDDYNGLIQLSDQARSVLQAPKEWVCL
SIO_010081: ESRP2
subclass of: SO_0000673
so part of: ESRP2
location: complement(join(3224262..3224351,3231659..3231836,3232768..3232963,3234174..3234372,3235714..3235935,3237889..3238190,3238685..3238727,3238922..3239054,3239880..3239990,3240782..3240836,3240958..3241056,3241789..3241903,3242935..3243048,3260372..3260500,3261390..3261524))
location: region:3224262-3261524:-1
so has part: feature:3261390-3261524:-1:exon
so has part: feature:3260372-3260500:-1:exon
so has part: feature:3242935-3243048:-1:exon
so has part: feature:3241789-3241903:-1:exon
so has part: feature:3240958-3241056:-1:exon
so has part: feature:3240782-3240836:-1:exon
so has part: feature:3239880-3239990:-1:exon
so has part: feature:3238922-3239054:-1:exon
so has part: feature:3238685-3238727:-1:exon
so has part: feature:3237889-3238190:-1:exon
so has part: feature:3235714-3235935:-1:exon
so has part: feature:3234174-3234372:-1:exon
so has part: feature:3232768-3232963:-1:exon
so has part: feature:3231659-3231836:-1:exon
so has part: feature:3224262-3224351:-1:exon

XP_012425684.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3261390-3261524:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3260372-3260500:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3242935-3243048:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3241789-3241903:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3240958-3241056:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3240782-3240836:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3239880-3239990:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3238922-3239054:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3238685-3238727:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3237889-3238190:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3235714-3235935:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3234174-3234372:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3232768-3232963:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3231659-3231836:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3224262-3224351:-1:exon

LOC101233626
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC101233626
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3291103..3293616)
location: region:3291103-3293616:-1
so has part: feature:3291103-3293616:-1:exon
subclass of: SO_0000010

101233626
type: Gene
SIO_000068: ncbigene

position:3291103:-1
position: 3291103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3293616:-1
position: 3293616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3291103-3293616:-1:exon

LOC101233626
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC101233626
product: leukotriene B4 receptor 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004175000.5
SIO_010081: LOC101233626
subclass of: SO_0000673
so part of: LOC101233626
location: complement(3291103..3293616)
location: region:3291103-3293616:-1
so has part: feature:3291103-3293616:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3291103-3293616:-1:exon

LOC101233626
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC101233626
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leukotriene B4 receptor 1-like
translation: MSQGEESSGNSTWNIVRSVVCIILGLSFIIGTPGNCIVIWTVCTKMKQVSLSVLLILNLAIADVLVLITLPIWIYSFVDSWVFGVIFCKMLVFIIYCSMYASIFLITALSLERLLAVFYPFTIQTYRRKEKIYLIVLLIWFLSIAFGISVIPFQETEEMNGRLLCTCRNYSSNRQKVSFLLLETLAGFVIPFLIICTCYVCVARRISRMTYQSKRRSEHLIASVVVAFILCWFPHHIFNILDIISLEIELSNEEMSLALEEIVDKGVYISGALVFISSCINPLLYAFAARRFQNHLRFAKISKLFEQISQTVTEEDKKRSLVVAKHEDPLVGTENL
SIO_010081: LOC101233626
subclass of: SO_0000673
so part of: LOC101233626
location: complement(3292451..3293461)
location: region:3292451-3293461:-1
so has part: feature:3292451-3293461:-1:exon

XP_004175048.3
type: Protein
SIO_000068: ncbiprotein

position:3292451:-1
position: 3292451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3293461:-1
position: 3293461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3292451-3293461:-1:exon

PLA2G15
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: PLA2G15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3307892..3326235
location: region:3307892-3326235:1
so has part: feature:3307892-3326235:1:exon
subclass of: SO_0000010

100228600
type: Gene
SIO_000068: ncbigene

position:3307892:1
position: 3307892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3326235:1
position: 3326235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3307892-3326235:1:exon

PLA2G15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: PLA2G15
product: phospholipase A2 group XV
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, 7 long SRA reads, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 91 samples with support for all annotated introns
transcript id: XM_030282672.3
SIO_010081: PLA2G15
subclass of: SO_0000673
so part of: PLA2G15
location: join(3307892..3308132,3315542..3315698,3317075..3317193,3318615..3318713,3319091..3319315,3322033..3326235)
location: region:3307892-3326235:1
so has part: feature:3307892-3308132:1:exon
so has part: feature:3315542-3315698:1:exon
so has part: feature:3317075-3317193:1:exon
so has part: feature:3318615-3318713:1:exon
so has part: feature:3319091-3319315:1:exon
so has part: feature:3322033-3326235:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3307892-3308132:1:exon

position:3308132:1
position: 3308132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3315542-3315698:1:exon

position:3315542:1
position: 3315542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3315698:1
position: 3315698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3317075-3317193:1:exon

position:3317075:1
position: 3317075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3317193:1
position: 3317193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3318615-3318713:1:exon

position:3318615:1
position: 3318615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3318713:1
position: 3318713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3319091-3319315:1:exon

position:3319091:1
position: 3319091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3319315:1
position: 3319315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3322033-3326235:1:exon

position:3322033:1
position: 3322033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PLA2G15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: PLA2G15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipase A2 group XV
translation: MFLPAGARLLPCSGRSSFLSLLLLLLLCPGGGSAPHRRPAGPPVVLVPGDLGNQLEAKLDKPSVVHYLCSKKTDSYFTLWLNLELLLPVIIDCWIDNIRLVYNRTSKITEPPDGVDIRVPGFGQTFSLEFLDPSKRSVGSYFYMLVQSLVDWGYKRDEDVRGAPYDWRKAPNENKDYFVALRKMIELLYEQYGSPVVLIAHSMGNMYTLYFLNRQPQDWKDKYIKDYVSLGAPWGGVAKTLRVLASGDNNRIPVISSLKIRDQQRSAVSTNWMLPYNYTWPPDKVFVSTPTANYTLRDYWKFYRDIDFEDGWLMRQDTEPLVYGMTPPGVRIHCLYGTGVETPDSFHYESFPDREPKIFYSDGDGTVNLQSALQCRKWVDRQKQEVVMFELSGNEHIEMLSNYTTISYVKKLLFDL
SIO_010081: PLA2G15
subclass of: SO_0000673
so part of: PLA2G15
location: join(3307994..3308132,3315542..3315698,3317075..3317193,3318615..3318713,3319091..3319315,3322033..3322544)
location: region:3307994-3322544:1
so has part: feature:3307994-3308132:1:exon
so has part: feature:3315542-3315698:1:exon
so has part: feature:3317075-3317193:1:exon
so has part: feature:3318615-3318713:1:exon
so has part: feature:3319091-3319315:1:exon
so has part: feature:3322033-3322544:1:exon

XP_030138532.3
type: Protein
SIO_000068: ncbiprotein

position:3307994:1
position: 3307994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3322544:1
position: 3322544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3307994-3308132:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3315542-3315698:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3317075-3317193:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3318615-3318713:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3319091-3319315:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3322033-3322544:1:exon

SMPD3
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: SMPD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3373004..3476389
location: region:3373004-3476389:1
so has part: feature:3373004-3476389:1:exon
subclass of: SO_0000010

100227648
type: Gene
SIO_000068: ncbigene

position:3373004:1
position: 3373004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3476389:1
position: 3476389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3373004-3476389:1:exon

SMPD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: SMPD3
product: sphingomyelin phosphodiesterase 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 11 long SRA reads, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 77 samples with support for all annotated introns
transcript id: XM_030282677.3
SIO_010081: SMPD3
subclass of: SO_0000673
so part of: SMPD3
location: join(3373004..3373237,3440281..3441905,3453709..3453784,3460024..3460179,3464350..3464439,3465228..3465291,3470855..3471017,3471836..3476389)
location: region:3373004-3476389:1
so has part: feature:3373004-3373237:1:exon
so has part: feature:3440281-3441905:1:exon
so has part: feature:3453709-3453784:1:exon
so has part: feature:3460024-3460179:1:exon
so has part: feature:3464350-3464439:1:exon
so has part: feature:3465228-3465291:1:exon
so has part: feature:3470855-3471017:1:exon
so has part: feature:3471836-3476389:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3373004-3373237:1:exon

position:3373237:1
position: 3373237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3440281-3441905:1:exon

position:3440281:1
position: 3440281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3441905:1
position: 3441905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3453709-3453784:1:exon

position:3453709:1
position: 3453709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3453784:1
position: 3453784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3460024-3460179:1:exon

position:3460024:1
position: 3460024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3460179:1
position: 3460179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3464350-3464439:1:exon

position:3464350:1
position: 3464350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3464439:1
position: 3464439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3465228-3465291:1:exon

position:3465228:1
position: 3465228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3465291:1
position: 3465291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3470855-3471017:1:exon

position:3470855:1
position: 3470855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3471017:1
position: 3471017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3471836-3476389:1:exon

position:3471836:1
position: 3471836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SMPD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: SMPD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sphingomyelin phosphodiesterase 3
translation: MVLYTSPFPNSFLSVLHSFSWGLIFPCYWLADRLVGSFVPTTYEKRQRADDPCYFHALCIIITTPIYLALLVASLPFALIGFLLWSPLQSARRPYIYSRLKDKNHSNGATLLTEWKAAGSGKSFCFGSANVCLLPDSLARFNNVFNTQARAKEIGRRIRNGASRPQIKIYIDSPTNTSISAASFSSLVSPQAGDNRTVNAGIKRTTSMEYKGDNCGSNNGEENREDKGGSGEPHEGEENTCIVRINGEENGHMSDTEVDNVNSQARASGPAEPPLEGDAEVSKTPNHKQKEGDSGSLDSCSASRESLVKVRVGDGTVDQSTVNNKLLYKASIMKKTSVRKKKHTDETFDHEISAFFPANLDFLCLQEVFDKRAAEKLKEQLHHYFEYIVYDVGVYSCHGCCSFKFVNSGLLFASRYPVMDAAYHCYPNGRGMDSLASKGALFLKVQVGSTPQDQRIVGYISCTHLQAIAGDTTVRCEQLDMLQDWLSEFRKSTSSSSTANPEELVAFDVLCGDLNFDNCSSEDKLEQQHSLFTHYKDPCRVGPGEDKPWAIGTLLDPEGLYDEEVCTPDNLQKVLESEEGRKGYLVYPTSKNHGSSQKGRKASLKGNGRRIDYMLYTEEGLYLEWKVEVEEFSFITQLAGLTDHLPVAMRLMVSTGEDDP
SIO_010081: SMPD3
subclass of: SO_0000673
so part of: SMPD3
location: join(3440574..3441905,3453709..3453784,3460024..3460179,3464350..3464439,3465228..3465291,3470855..3471017,3471836..3471937)
location: region:3440574-3471937:1
so has part: feature:3440574-3441905:1:exon
so has part: feature:3453709-3453784:1:exon
so has part: feature:3460024-3460179:1:exon
so has part: feature:3464350-3464439:1:exon
so has part: feature:3465228-3465291:1:exon
so has part: feature:3470855-3471017:1:exon
so has part: feature:3471836-3471937:1:exon

XP_030138537.3
type: Protein
SIO_000068: ncbiprotein

position:3440574:1
position: 3440574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3471937:1
position: 3471937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3440574-3441905:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3453709-3453784:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3460024-3460179:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3464350-3464439:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3465228-3465291:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3470855-3471017:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3471836-3471937:1:exon

LOC121470552
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121470552
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3466375..3470861)
location: region:3466375-3470861:-1
so has part: feature:3466375-3470861:-1:exon
subclass of: SO_0000011

121470552
type: Gene
SIO_000068: ncbigene

position:3466375:-1
position: 3466375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3470861:-1
position: 3470861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3466375-3470861:-1:exon

LOC121470552
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC121470552
product: uncharacterized LOC121470552
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XR_005981585.1
SIO_010081: LOC121470552
subclass of: SO_0000673
so part of: LOC121470552
location: complement(join(3466375..3468389,3468462..3470861))
location: region:3466375-3470861:-1
so has part: feature:3468462-3470861:-1:exon
so has part: feature:3466375-3468389:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3468462-3470861:-1:exon

position:3468462:-1
position: 3468462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3466375-3468389:-1:exon

position:3468389:-1
position: 3468389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PRMT7
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: PRMT7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3485954..3502748)
location: region:3485954-3502748:-1
so has part: feature:3485954-3502748:-1:exon
subclass of: SO_0000010

100227591
type: Gene
SIO_000068: ncbigene

position:3485954:-1
position: 3485954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3502748:-1
position: 3502748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3485954-3502748:-1:exon

PRMT7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: PRMT7
product: protein arginine methyltransferase 7, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, 4 long SRA reads, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
transcript id: XM_041718493.1
SIO_010081: PRMT7
subclass of: SO_0000673
so part of: PRMT7
location: complement(join(3485954..3486167,3486684..3486780,3487989..3488149,3488554..3488628,3490963..3491124,3491735..3491824,3492661..3492708,3493764..3493847,3494251..3494410,3495214..3495341,3496431..3496608,3496766..3497007,3498166..3498278,3498978..3499086,3499634..3499783,3501075..3501111,3501874..3502048,3502670..3502748))
location: region:3485954-3502748:-1
so has part: feature:3502670-3502748:-1:exon
so has part: feature:3501874-3502048:-1:exon
so has part: feature:3501075-3501111:-1:exon
so has part: feature:3499634-3499783:-1:exon
so has part: feature:3498978-3499086:-1:exon
so has part: feature:3498166-3498278:-1:exon
so has part: feature:3496766-3497007:-1:exon
so has part: feature:3496431-3496608:-1:exon
so has part: feature:3495214-3495341:-1:exon
so has part: feature:3494251-3494410:-1:exon
so has part: feature:3493764-3493847:-1:exon
so has part: feature:3492661-3492708:-1:exon
so has part: feature:3491735-3491824:-1:exon
so has part: feature:3490963-3491124:-1:exon
so has part: feature:3488554-3488628:-1:exon
so has part: feature:3487989-3488149:-1:exon
so has part: feature:3486684-3486780:-1:exon
so has part: feature:3485954-3486167:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3502670-3502748:-1:exon

position:3502670:-1
position: 3502670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3501874-3502048:-1:exon

position:3501874:-1
position: 3501874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3502048:-1
position: 3502048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3501075-3501111:-1:exon

position:3501075:-1
position: 3501075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3501111:-1
position: 3501111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3499634-3499783:-1:exon

position:3499634:-1
position: 3499634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3499783:-1
position: 3499783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3498978-3499086:-1:exon

position:3498978:-1
position: 3498978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3499086:-1
position: 3499086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3498166-3498278:-1:exon

position:3498166:-1
position: 3498166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3498278:-1
position: 3498278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3496766-3497007:-1:exon

position:3496766:-1
position: 3496766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3497007:-1
position: 3497007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3496431-3496608:-1:exon

position:3496431:-1
position: 3496431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3496608:-1
position: 3496608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3495214-3495341:-1:exon

position:3495214:-1
position: 3495214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3495341:-1
position: 3495341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3494251-3494410:-1:exon

position:3494251:-1
position: 3494251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3494410:-1
position: 3494410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3493764-3493847:-1:exon

position:3493764:-1
position: 3493764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3493847:-1
position: 3493847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3492661-3492708:-1:exon

position:3492661:-1
position: 3492661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3492708:-1
position: 3492708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3491735-3491824:-1:exon

position:3491735:-1
position: 3491735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3491824:-1
position: 3491824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3490963-3491124:-1:exon

position:3490963:-1
position: 3490963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3491124:-1
position: 3491124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3488554-3488628:-1:exon

position:3488554:-1
position: 3488554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3488628:-1
position: 3488628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3487989-3488149:-1:exon

position:3487989:-1
position: 3487989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3488149:-1
position: 3488149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3486684-3486780:-1:exon

position:3486684:-1
position: 3486684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3486780:-1
position: 3486780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3485954-3486167:-1:exon

position:3486167:-1
position: 3486167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PRMT7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: PRMT7
product: protein arginine methyltransferase 7, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, 3 long SRA reads, 7 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_012570208.4
SIO_010081: PRMT7
subclass of: SO_0000673
so part of: PRMT7
location: complement(join(3485954..3486167,3486684..3486780,3487989..3488149,3488554..3488628,3490963..3491124,3491735..3491824,3492661..3492708,3493764..3493847,3494251..3494410,3495214..3495341,3496431..3496608,3496766..3497007,3498166..3498278,3498978..3499086,3499634..3499783,3501075..3501111,3501874..3502048,3502607..3502666))
location: region:3485954-3502666:-1
so has part: feature:3502607-3502666:-1:exon
so has part: feature:3501874-3502048:-1:exon
so has part: feature:3501075-3501111:-1:exon
so has part: feature:3499634-3499783:-1:exon
so has part: feature:3498978-3499086:-1:exon
so has part: feature:3498166-3498278:-1:exon
so has part: feature:3496766-3497007:-1:exon
so has part: feature:3496431-3496608:-1:exon
so has part: feature:3495214-3495341:-1:exon
so has part: feature:3494251-3494410:-1:exon
so has part: feature:3493764-3493847:-1:exon
so has part: feature:3492661-3492708:-1:exon
so has part: feature:3491735-3491824:-1:exon
so has part: feature:3490963-3491124:-1:exon
so has part: feature:3488554-3488628:-1:exon
so has part: feature:3487989-3488149:-1:exon
so has part: feature:3486684-3486780:-1:exon
so has part: feature:3485954-3486167:-1:exon

position:3502666:-1
position: 3502666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3502607-3502666:-1:exon

position:3502607:-1
position: 3502607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3501874-3502048:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3501075-3501111:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3499634-3499783:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3498978-3499086:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3498166-3498278:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3496766-3497007:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3496431-3496608:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3495214-3495341:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3494251-3494410:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3493764-3493847:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3492661-3492708:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3491735-3491824:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3490963-3491124:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3488554-3488628:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3487989-3488149:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3486684-3486780:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3485954-3486167:-1:exon

PRMT7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: PRMT7
product: protein arginine methyltransferase 7, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_030282674.3
SIO_010081: PRMT7
subclass of: SO_0000673
so part of: PRMT7
location: complement(join(3485954..3486167,3486684..3486780,3487989..3488149,3488554..3488628,3490963..3491124,3491735..3491824,3492661..3492708,3493764..3493847,3494251..3494410,3495214..3495341,3496431..3496608,3496766..3497007,3498166..3498278,3498978..3499086,3499634..3499783,3501075..3501111,3501874..3502048,3502648..3502665))
location: region:3485954-3502665:-1
so has part: feature:3502648-3502665:-1:exon
so has part: feature:3501874-3502048:-1:exon
so has part: feature:3501075-3501111:-1:exon
so has part: feature:3499634-3499783:-1:exon
so has part: feature:3498978-3499086:-1:exon
so has part: feature:3498166-3498278:-1:exon
so has part: feature:3496766-3497007:-1:exon
so has part: feature:3496431-3496608:-1:exon
so has part: feature:3495214-3495341:-1:exon
so has part: feature:3494251-3494410:-1:exon
so has part: feature:3493764-3493847:-1:exon
so has part: feature:3492661-3492708:-1:exon
so has part: feature:3491735-3491824:-1:exon
so has part: feature:3490963-3491124:-1:exon
so has part: feature:3488554-3488628:-1:exon
so has part: feature:3487989-3488149:-1:exon
so has part: feature:3486684-3486780:-1:exon
so has part: feature:3485954-3486167:-1:exon

position:3502665:-1
position: 3502665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3502648-3502665:-1:exon

position:3502648:-1
position: 3502648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3501874-3502048:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3501075-3501111:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3499634-3499783:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3498978-3499086:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3498166-3498278:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3496766-3497007:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3496431-3496608:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3495214-3495341:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3494251-3494410:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3493764-3493847:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3492661-3492708:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3491735-3491824:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3490963-3491124:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3488554-3488628:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3487989-3488149:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3486684-3486780:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3485954-3486167:-1:exon

PRMT7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: PRMT7
product: protein arginine methyltransferase 7, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, 3 long SRA reads, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_030282676.3
SIO_010081: PRMT7
subclass of: SO_0000673
so part of: PRMT7
location: complement(join(3485954..3486167,3486684..3486780,3487989..3488149,3488554..3488628,3490963..3491124,3491735..3491824,3492661..3492708,3493764..3493847,3494251..3494410,3495214..3495341,3496431..3496608,3496766..3497007,3498166..3498278,3498978..3499086,3499634..3499783,3501075..3501111,3501874..3502048,3502414..3502587))
location: region:3485954-3502587:-1
so has part: feature:3502414-3502587:-1:exon
so has part: feature:3501874-3502048:-1:exon
so has part: feature:3501075-3501111:-1:exon
so has part: feature:3499634-3499783:-1:exon
so has part: feature:3498978-3499086:-1:exon
so has part: feature:3498166-3498278:-1:exon
so has part: feature:3496766-3497007:-1:exon
so has part: feature:3496431-3496608:-1:exon
so has part: feature:3495214-3495341:-1:exon
so has part: feature:3494251-3494410:-1:exon
so has part: feature:3493764-3493847:-1:exon
so has part: feature:3492661-3492708:-1:exon
so has part: feature:3491735-3491824:-1:exon
so has part: feature:3490963-3491124:-1:exon
so has part: feature:3488554-3488628:-1:exon
so has part: feature:3487989-3488149:-1:exon
so has part: feature:3486684-3486780:-1:exon
so has part: feature:3485954-3486167:-1:exon

position:3502587:-1
position: 3502587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3502414-3502587:-1:exon

position:3502414:-1
position: 3502414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3501874-3502048:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3501075-3501111:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3499634-3499783:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3498978-3499086:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3498166-3498278:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3496766-3497007:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3496431-3496608:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3495214-3495341:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3494251-3494410:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3493764-3493847:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3492661-3492708:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3491735-3491824:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3490963-3491124:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3488554-3488628:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3487989-3488149:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3486684-3486780:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3485954-3486167:-1:exon

PRMT7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: PRMT7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein arginine N-methyltransferase 7
translation: MKTFCGRANPTTGSMEWLEEGEDYDYHQEIARSRYADMLHDKDRNVKYYQGIRAAVSRVKERGEKAIVLDIGTGTGLLSMMAASAGADFCYAIEVFKPMANAAVKIVEKNGFSDKIKVINKHSTEVTVGPDGDMQCRANILVTELFDTELIGEGALPTYEHAHKYLVQEGCEAVPHRATVYVQLVESRRMWSWKKLFPVHIEAEDGEKILVPPSEMENCPGLPSVCDIQLNQMPSSDFSTLSDVVKMFSVDFSKPVQSASTYYRVQLEPVKSGKAQIVLSWWDIDMDPSGMINCSMAPYWAKPTSALQWRDHWMQCVYFLPREEPVLQGEKLYLTACRDEYSVWYNLQKAREGENGADEEEHKAGVGVESPVCRCRAHLLWNRPRFGELNDQNRTRQYIKSLRKVLKTDSVCLCISDGSLLPVLAHYLGAKQVFTLENSGVSCSVMEKFFKANNLEDKIKIIEARPELLKPSHLEDKKISVLVGEPFFTTSLLPWHNLYFWYARTAVSTHLASNVTVLPQSASLHMMVVEFQDLWRIRSPCGICEGFDVGTMDDMIKDSLNFRESKEAEPHPLWEYPCKSLSEPQEVLTFDFTKTVPQHGLSTEGSAKLLRKGKSHGAVLWMEYHLAADISVSTGLMQLSNEKGNCEWNPHCKQAVYFFSSVIESEILSDPAVVTYTINFDTKTGEIAMDFKLL
SIO_010081: PRMT7
subclass of: SO_0000673
so part of: PRMT7
location: complement(join(3486012..3486167,3486684..3486780,3487989..3488149,3488554..3488628,3490963..3491124,3491735..3491824,3492661..3492708,3493764..3493847,3494251..3494410,3495214..3495341,3496431..3496608,3496766..3497007,3498166..3498278,3498978..3499086,3499634..3499783,3501075..3501111,3501874..3501968))
location: region:3486012-3501968:-1
so has part: feature:3501874-3501968:-1:exon
so has part: feature:3501075-3501111:-1:exon
so has part: feature:3499634-3499783:-1:exon
so has part: feature:3498978-3499086:-1:exon
so has part: feature:3498166-3498278:-1:exon
so has part: feature:3496766-3497007:-1:exon
so has part: feature:3496431-3496608:-1:exon
so has part: feature:3495214-3495341:-1:exon
so has part: feature:3494251-3494410:-1:exon
so has part: feature:3493764-3493847:-1:exon
so has part: feature:3492661-3492708:-1:exon
so has part: feature:3491735-3491824:-1:exon
so has part: feature:3490963-3491124:-1:exon
so has part: feature:3488554-3488628:-1:exon
so has part: feature:3487989-3488149:-1:exon
so has part: feature:3486684-3486780:-1:exon
so has part: feature:3486012-3486167:-1:exon

XP_041574427.1
type: Protein
SIO_000068: ncbiprotein

position:3486012:-1
position: 3486012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3501968:-1
position: 3501968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3501874-3501968:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3501075-3501111:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3499634-3499783:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3498978-3499086:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3498166-3498278:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3496766-3497007:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3496431-3496608:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3495214-3495341:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3494251-3494410:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3493764-3493847:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3492661-3492708:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3491735-3491824:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3490963-3491124:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3488554-3488628:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3487989-3488149:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3486684-3486780:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3486012-3486167:-1:exon

PRMT7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: PRMT7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein arginine N-methyltransferase 7
translation: MKTFCGRANPTTGSMEWLEEGEDYDYHQEIARSRYADMLHDKDRNVKYYQGIRAAVSRVKERGEKAIVLDIGTGTGLLSMMAASAGADFCYAIEVFKPMANAAVKIVEKNGFSDKIKVINKHSTEVTVGPDGDMQCRANILVTELFDTELIGEGALPTYEHAHKYLVQEGCEAVPHRATVYVQLVESRRMWSWKKLFPVHIEAEDGEKILVPPSEMENCPGLPSVCDIQLNQMPSSDFSTLSDVVKMFSVDFSKPVQSASTYYRVQLEPVKSGKAQIVLSWWDIDMDPSGMINCSMAPYWAKPTSALQWRDHWMQCVYFLPREEPVLQGEKLYLTACRDEYSVWYNLQKAREGENGADEEEHKAGVGVESPVCRCRAHLLWNRPRFGELNDQNRTRQYIKSLRKVLKTDSVCLCISDGSLLPVLAHYLGAKQVFTLENSGVSCSVMEKFFKANNLEDKIKIIEARPELLKPSHLEDKKISVLVGEPFFTTSLLPWHNLYFWYARTAVSTHLASNVTVLPQSASLHMMVVEFQDLWRIRSPCGICEGFDVGTMDDMIKDSLNFRESKEAEPHPLWEYPCKSLSEPQEVLTFDFTKTVPQHGLSTEGSAKLLRKGKSHGAVLWMEYHLAADISVSTGLMQLSNEKGNCEWNPHCKQAVYFFSSVIESEILSDPAVVTYTINFDTKTGEIAMDFKLL
SIO_010081: PRMT7
subclass of: SO_0000673
so part of: PRMT7
location: complement(join(3486012..3486167,3486684..3486780,3487989..3488149,3488554..3488628,3490963..3491124,3491735..3491824,3492661..3492708,3493764..3493847,3494251..3494410,3495214..3495341,3496431..3496608,3496766..3497007,3498166..3498278,3498978..3499086,3499634..3499783,3501075..3501111,3501874..3501968))
location: region:3486012-3501968:-1
so has part: feature:3501874-3501968:-1:exon
so has part: feature:3501075-3501111:-1:exon
so has part: feature:3499634-3499783:-1:exon
so has part: feature:3498978-3499086:-1:exon
so has part: feature:3498166-3498278:-1:exon
so has part: feature:3496766-3497007:-1:exon
so has part: feature:3496431-3496608:-1:exon
so has part: feature:3495214-3495341:-1:exon
so has part: feature:3494251-3494410:-1:exon
so has part: feature:3493764-3493847:-1:exon
so has part: feature:3492661-3492708:-1:exon
so has part: feature:3491735-3491824:-1:exon
so has part: feature:3490963-3491124:-1:exon
so has part: feature:3488554-3488628:-1:exon
so has part: feature:3487989-3488149:-1:exon
so has part: feature:3486684-3486780:-1:exon
so has part: feature:3486012-3486167:-1:exon

XP_030138534.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3501874-3501968:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3501075-3501111:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3499634-3499783:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3498978-3499086:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3498166-3498278:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3496766-3497007:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3496431-3496608:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3495214-3495341:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3494251-3494410:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3493764-3493847:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3492661-3492708:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3491735-3491824:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3490963-3491124:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3488554-3488628:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3487989-3488149:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3486684-3486780:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3486012-3486167:-1:exon

PRMT7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: PRMT7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein arginine N-methyltransferase 7
translation: MKTFCGRANPTTGSMEWLEEGEDYDYHQEIARSRYADMLHDKDRNVKYYQGIRAAVSRVKERGEKAIVLDIGTGTGLLSMMAASAGADFCYAIEVFKPMANAAVKIVEKNGFSDKIKVINKHSTEVTVGPDGDMQCRANILVTELFDTELIGEGALPTYEHAHKYLVQEGCEAVPHRATVYVQLVESRRMWSWKKLFPVHIEAEDGEKILVPPSEMENCPGLPSVCDIQLNQMPSSDFSTLSDVVKMFSVDFSKPVQSASTYYRVQLEPVKSGKAQIVLSWWDIDMDPSGMINCSMAPYWAKPTSALQWRDHWMQCVYFLPREEPVLQGEKLYLTACRDEYSVWYNLQKAREGENGADEEEHKAGVGVESPVCRCRAHLLWNRPRFGELNDQNRTRQYIKSLRKVLKTDSVCLCISDGSLLPVLAHYLGAKQVFTLENSGVSCSVMEKFFKANNLEDKIKIIEARPELLKPSHLEDKKISVLVGEPFFTTSLLPWHNLYFWYARTAVSTHLASNVTVLPQSASLHMMVVEFQDLWRIRSPCGICEGFDVGTMDDMIKDSLNFRESKEAEPHPLWEYPCKSLSEPQEVLTFDFTKTVPQHGLSTEGSAKLLRKGKSHGAVLWMEYHLAADISVSTGLMQLSNEKGNCEWNPHCKQAVYFFSSVIESEILSDPAVVTYTINFDTKTGEIAMDFKLL
SIO_010081: PRMT7
subclass of: SO_0000673
so part of: PRMT7
location: complement(join(3486012..3486167,3486684..3486780,3487989..3488149,3488554..3488628,3490963..3491124,3491735..3491824,3492661..3492708,3493764..3493847,3494251..3494410,3495214..3495341,3496431..3496608,3496766..3497007,3498166..3498278,3498978..3499086,3499634..3499783,3501075..3501111,3501874..3501968))
location: region:3486012-3501968:-1
so has part: feature:3501874-3501968:-1:exon
so has part: feature:3501075-3501111:-1:exon
so has part: feature:3499634-3499783:-1:exon
so has part: feature:3498978-3499086:-1:exon
so has part: feature:3498166-3498278:-1:exon
so has part: feature:3496766-3497007:-1:exon
so has part: feature:3496431-3496608:-1:exon
so has part: feature:3495214-3495341:-1:exon
so has part: feature:3494251-3494410:-1:exon
so has part: feature:3493764-3493847:-1:exon
so has part: feature:3492661-3492708:-1:exon
so has part: feature:3491735-3491824:-1:exon
so has part: feature:3490963-3491124:-1:exon
so has part: feature:3488554-3488628:-1:exon
so has part: feature:3487989-3488149:-1:exon
so has part: feature:3486684-3486780:-1:exon
so has part: feature:3486012-3486167:-1:exon

XP_030138536.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3501874-3501968:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3501075-3501111:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3499634-3499783:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3498978-3499086:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3498166-3498278:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3496766-3497007:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3496431-3496608:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3495214-3495341:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3494251-3494410:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3493764-3493847:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3492661-3492708:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3491735-3491824:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3490963-3491124:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3488554-3488628:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3487989-3488149:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3486684-3486780:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3486012-3486167:-1:exon

PRMT7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: PRMT7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein arginine N-methyltransferase 7
translation: MKTFCGRANPTTGSMEWLEEGEDYDYHQEIARSRYADMLHDKDRNVKYYQGIRAAVSRVKERGEKAIVLDIGTGTGLLSMMAASAGADFCYAIEVFKPMANAAVKIVEKNGFSDKIKVINKHSTEVTVGPDGDMQCRANILVTELFDTELIGEGALPTYEHAHKYLVQEGCEAVPHRATVYVQLVESRRMWSWKKLFPVHIEAEDGEKILVPPSEMENCPGLPSVCDIQLNQMPSSDFSTLSDVVKMFSVDFSKPVQSASTYYRVQLEPVKSGKAQIVLSWWDIDMDPSGMINCSMAPYWAKPTSALQWRDHWMQCVYFLPREEPVLQGEKLYLTACRDEYSVWYNLQKAREGENGADEEEHKAGVGVESPVCRCRAHLLWNRPRFGELNDQNRTRQYIKSLRKVLKTDSVCLCISDGSLLPVLAHYLGAKQVFTLENSGVSCSVMEKFFKANNLEDKIKIIEARPELLKPSHLEDKKISVLVGEPFFTTSLLPWHNLYFWYARTAVSTHLASNVTVLPQSASLHMMVVEFQDLWRIRSPCGICEGFDVGTMDDMIKDSLNFRESKEAEPHPLWEYPCKSLSEPQEVLTFDFTKTVPQHGLSTEGSAKLLRKGKSHGAVLWMEYHLAADISVSTGLMQLSNEKGNCEWNPHCKQAVYFFSSVIESEILSDPAVVTYTINFDTKTGEIAMDFKLL
SIO_010081: PRMT7
subclass of: SO_0000673
so part of: PRMT7
location: complement(join(3486012..3486167,3486684..3486780,3487989..3488149,3488554..3488628,3490963..3491124,3491735..3491824,3492661..3492708,3493764..3493847,3494251..3494410,3495214..3495341,3496431..3496608,3496766..3497007,3498166..3498278,3498978..3499086,3499634..3499783,3501075..3501111,3501874..3501968))
location: region:3486012-3501968:-1
so has part: feature:3501874-3501968:-1:exon
so has part: feature:3501075-3501111:-1:exon
so has part: feature:3499634-3499783:-1:exon
so has part: feature:3498978-3499086:-1:exon
so has part: feature:3498166-3498278:-1:exon
so has part: feature:3496766-3497007:-1:exon
so has part: feature:3496431-3496608:-1:exon
so has part: feature:3495214-3495341:-1:exon
so has part: feature:3494251-3494410:-1:exon
so has part: feature:3493764-3493847:-1:exon
so has part: feature:3492661-3492708:-1:exon
so has part: feature:3491735-3491824:-1:exon
so has part: feature:3490963-3491124:-1:exon
so has part: feature:3488554-3488628:-1:exon
so has part: feature:3487989-3488149:-1:exon
so has part: feature:3486684-3486780:-1:exon
so has part: feature:3486012-3486167:-1:exon

XP_012425662.4
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3501874-3501968:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3501075-3501111:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3499634-3499783:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3498978-3499086:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3498166-3498278:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3496766-3497007:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3496431-3496608:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3495214-3495341:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3494251-3494410:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3493764-3493847:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3492661-3492708:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3491735-3491824:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3490963-3491124:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3488554-3488628:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3487989-3488149:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3486684-3486780:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3486012-3486167:-1:exon

SLC7A6OS
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: SLC7A6OS
note: solute carrier family 7 member 6 opposite strand; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: 3502722..3506663
location: region:3502722-3506663:1
so has part: feature:3502722-3506663:1:exon
subclass of: SO_0000010

100187705
type: Gene
SIO_000068: ncbigene

position:3502722:1
position: 3502722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3506663:1
position: 3506663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3502722-3506663:1:exon

SLC7A6OS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: SLC7A6OS
product: solute carrier family 7 member 6 opposite strand
inference: similar to RNA sequence, mRNA (same species):RefSeq:NM_001245102.1
exception: annotated by transcript or proteomic data
note: The RefSeq transcript has 17 substitutions, 1 non-frameshifting indel compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001245102.1
SIO_010081: SLC7A6OS
subclass of: SO_0000673
so part of: SLC7A6OS
location: join(3502722..3502874,3503630..3504007,3504343..3504540,3505396..3505519,3505984..3506663)
location: region:3502722-3506663:1
so has part: feature:3502722-3502874:1:exon
so has part: feature:3503630-3504007:1:exon
so has part: feature:3504343-3504540:1:exon
so has part: feature:3505396-3505519:1:exon
so has part: feature:3505984-3506663:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3502722-3502874:1:exon

position:3502874:1
position: 3502874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3503630-3504007:1:exon

position:3503630:1
position: 3503630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3504007:1
position: 3504007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3504343-3504540:1:exon

position:3504343:1
position: 3504343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3504540:1
position: 3504540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3505396-3505519:1:exon

position:3505396:1
position: 3505396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3505519:1
position: 3505519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3505984-3506663:1:exon

position:3505984:1
position: 3505984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SLC7A6OS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: SLC7A6OS
inference: similar to AA sequence (same species):RefSeq:NP_001232031.1
exception: annotated by transcript or proteomic data
note: The RefSeq protein has 3 substitutions compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: probable RNA polymerase II nuclear localization protein SLC7A6OS
translation: MAGAAVLRVRRKRGGPEPAEALLLACKRRRAEPVENNLFKLVATVSSKHEPVQKYVKDAITRDKAAQSLRPSLGSTQRILQELRCAKQADRKEKRYRVISSHRPDCPGTAAPAAHGQAEPHGDSSEPGAPQDAAPEESGAVHNSSDCCGKFQLFDIVQEEEMVGDPSVTTANPQKTDPDAILCNAVEMIREHLNVSEDGKKEHGHKEDEYVYDIYYKETSAPDWIENILSVQPYREEYEWVNDDPGPEEVYEDEDDENDENNWRNDYPEEDEFLPEEDGEKDSEESFSDEDQCYRRRTWNKYRQEVLQEFGYDETEDLGSD
SIO_010081: SLC7A6OS
subclass of: SO_0000673
so part of: SLC7A6OS
location: join(3502731..3502874,3503630..3504007,3504343..3504540,3505396..3505519,3505984..3506105)
location: region:3502731-3506105:1
so has part: feature:3502731-3502874:1:exon
so has part: feature:3503630-3504007:1:exon
so has part: feature:3504343-3504540:1:exon
so has part: feature:3505396-3505519:1:exon
so has part: feature:3505984-3506105:1:exon

NP_001232031.1
type: Protein
SIO_000068: ncbiprotein

position:3502731:1
position: 3502731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3506105:1
position: 3506105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3502731-3502874:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3503630-3504007:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3504343-3504540:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3505396-3505519:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3505984-3506105:1:exon

SLC7A6
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: SLC7A6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3507537..3534531)
location: region:3507537-3534531:-1
so has part: feature:3507537-3534531:-1:exon
subclass of: SO_0000010

100230406
type: Gene
SIO_000068: ncbigene

position:3507537:-1
position: 3507537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3534531:-1
position: 3534531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3507537-3534531:-1:exon

SLC7A6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: SLC7A6
product: solute carrier family 7 member 6, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs, 1 long SRA read, 42 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_030282681.3
SIO_010081: SLC7A6
subclass of: SO_0000673
so part of: SLC7A6
location: complement(join(3507537..3508364,3509515..3509698,3510399..3510548,3511203..3511299,3512333..3512436,3520222..3520345,3522831..3522975,3524721..3524846,3528456..3529019,3534403..3534531))
location: region:3507537-3534531:-1
so has part: feature:3534403-3534531:-1:exon
so has part: feature:3528456-3529019:-1:exon
so has part: feature:3524721-3524846:-1:exon
so has part: feature:3522831-3522975:-1:exon
so has part: feature:3520222-3520345:-1:exon
so has part: feature:3512333-3512436:-1:exon
so has part: feature:3511203-3511299:-1:exon
so has part: feature:3510399-3510548:-1:exon
so has part: feature:3509515-3509698:-1:exon
so has part: feature:3507537-3508364:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3534403-3534531:-1:exon

position:3534403:-1
position: 3534403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3528456-3529019:-1:exon

position:3528456:-1
position: 3528456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3529019:-1
position: 3529019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3524721-3524846:-1:exon

position:3524721:-1
position: 3524721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3524846:-1
position: 3524846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3522831-3522975:-1:exon

position:3522831:-1
position: 3522831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3522975:-1
position: 3522975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3520222-3520345:-1:exon

position:3520222:-1
position: 3520222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3520345:-1
position: 3520345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3512333-3512436:-1:exon

position:3512333:-1
position: 3512333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3512436:-1
position: 3512436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3511203-3511299:-1:exon

position:3511203:-1
position: 3511203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3511299:-1
position: 3511299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3510399-3510548:-1:exon

position:3510399:-1
position: 3510399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3510548:-1
position: 3510548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3509515-3509698:-1:exon

position:3509515:-1
position: 3509515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3509698:-1
position: 3509698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3507537-3508364:-1:exon

position:3508364:-1
position: 3508364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC7A6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: SLC7A6
product: solute carrier family 7 member 6, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs, 1 long SRA read, 42 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 79 samples with support for all annotated introns
transcript id: XM_030282678.3
SIO_010081: SLC7A6
subclass of: SO_0000673
so part of: SLC7A6
location: complement(join(3507537..3508364,3509515..3509698,3510399..3510548,3511203..3511299,3512333..3512436,3520222..3520345,3522831..3522975,3524721..3524846,3528456..3529019,3534215..3534309))
location: region:3507537-3534309:-1
so has part: feature:3534215-3534309:-1:exon
so has part: feature:3528456-3529019:-1:exon
so has part: feature:3524721-3524846:-1:exon
so has part: feature:3522831-3522975:-1:exon
so has part: feature:3520222-3520345:-1:exon
so has part: feature:3512333-3512436:-1:exon
so has part: feature:3511203-3511299:-1:exon
so has part: feature:3510399-3510548:-1:exon
so has part: feature:3509515-3509698:-1:exon
so has part: feature:3507537-3508364:-1:exon

position:3534309:-1
position: 3534309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3534215-3534309:-1:exon

position:3534215:-1
position: 3534215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3528456-3529019:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3524721-3524846:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3522831-3522975:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3520222-3520345:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3512333-3512436:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3511203-3511299:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3510399-3510548:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3509515-3509698:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3507537-3508364:-1:exon

SLC7A6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: SLC7A6
product: solute carrier family 7 member 6, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 83 samples with support for all annotated introns
transcript id: XM_041718494.1
SIO_010081: SLC7A6
subclass of: SO_0000673
so part of: SLC7A6
location: complement(join(3507537..3508364,3509515..3509698,3510399..3510548,3520222..3520345,3522831..3522975,3524721..3524846,3528456..3529019))
location: region:3507537-3529019:-1
so has part: feature:3528456-3529019:-1:exon
so has part: feature:3524721-3524846:-1:exon
so has part: feature:3522831-3522975:-1:exon
so has part: feature:3520222-3520345:-1:exon
so has part: feature:3510399-3510548:-1:exon
so has part: feature:3509515-3509698:-1:exon
so has part: feature:3507537-3508364:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3528456-3529019:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3524721-3524846:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3522831-3522975:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3520222-3520345:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3510399-3510548:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3509515-3509698:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3507537-3508364:-1:exon

SLC7A6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: SLC7A6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Y+L amino acid transporter 2 isoform X2
translation: MAERTDYTKSQISLSEYSPVNKSERTDTHRAQDGDQNTMQLKKEISLLNGISLIVGNMIGSGIFVSPKGVLIYSRSYGLSLIIWAVGGIFSVFGALCYAELGTTVTKSGASYAYILESFGSFIAFIRLWTSLLIVEPTSQAIIAITFANYIIQPFFPSCDPPYVACRLIAAACECLLTFINCAYVKWGTRVQDIFTYAKVAALIAIIIAGLVQICQGHTGHFKNSFEGSSSDIGEISLALYSALFSYSGWDTLNYVTEEIKNPERNLPLAIAVSMPIVTIIYIMTNIAYYTVLDADAVLSSDAVAVCFMTLIYLAVEDVFKLINYFSFSYWFFVGLSIAGQLYLRWKEPDRPRPLKLSLAFPIIFCICTVFLVVVPLYSDFINSVIGIAIALSGIPFFFLGVYLPASRRPQFINKIMGAVTRNMQMLCYCVLTEMDPNEEKKPEIKTK
SIO_010081: SLC7A6
subclass of: SO_0000673
so part of: SLC7A6
location: complement(join(3508270..3508364,3509515..3509698,3510399..3510548,3520222..3520345,3522831..3522975,3524721..3524846,3528456..3528978))
location: region:3508270-3528978:-1
so has part: feature:3528456-3528978:-1:exon
so has part: feature:3524721-3524846:-1:exon
so has part: feature:3522831-3522975:-1:exon
so has part: feature:3520222-3520345:-1:exon
so has part: feature:3510399-3510548:-1:exon
so has part: feature:3509515-3509698:-1:exon
so has part: feature:3508270-3508364:-1:exon

XP_041574428.1
type: Protein
SIO_000068: ncbiprotein

position:3508270:-1
position: 3508270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3528978:-1
position: 3528978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3528456-3528978:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3524721-3524846:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3522831-3522975:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3520222-3520345:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3510399-3510548:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3509515-3509698:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3508270-3508364:-1:exon

SLC7A6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: SLC7A6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Y+L amino acid transporter 2 isoform X1
translation: MAERTDYTKSQISLSEYSPVNKSERTDTHRAQDGDQNTMQLKKEISLLNGISLIVGNMIGSGIFVSPKGVLIYSRSYGLSLIIWAVGGIFSVFGALCYAELGTTVTKSGASYAYILESFGSFIAFIRLWTSLLIVEPTSQAIIAITFANYIIQPFFPSCDPPYVACRLIAAACECLLTFINCAYVKWGTRVQDIFTYAKVAALIAIIIAGLVQICQGHTGHFKNSFEGSSSDIGEISLALYSALFSYSGWDTLNYVTEEIKNPERNLPLAIAVSMPIVTIIYIMTNIAYYTVLDADAVLSSDAVAVTFADRIFGIFSWTIPIAVAFSCFGGLNASILASSRLFFVGSREGHLPDLLSMIHIKRFTPVPALLFNCFMTLIYLAVEDVFKLINYFSFSYWFFVGLSIAGQLYLRWKEPDRPRPLKLSLAFPIIFCICTVFLVVVPLYSDFINSVIGIAIALSGIPFFFLGVYLPASRRPQFINKIMGAVTRNMQMLCYCVLTEMDPNEEKKPEIKTK
SIO_010081: SLC7A6
subclass of: SO_0000673
so part of: SLC7A6
location: complement(join(3508270..3508364,3509515..3509698,3510399..3510548,3511203..3511299,3512333..3512436,3520222..3520345,3522831..3522975,3524721..3524846,3528456..3528978))
location: region:3508270-3528978:-1
so has part: feature:3528456-3528978:-1:exon
so has part: feature:3524721-3524846:-1:exon
so has part: feature:3522831-3522975:-1:exon
so has part: feature:3520222-3520345:-1:exon
so has part: feature:3512333-3512436:-1:exon
so has part: feature:3511203-3511299:-1:exon
so has part: feature:3510399-3510548:-1:exon
so has part: feature:3509515-3509698:-1:exon
so has part: feature:3508270-3508364:-1:exon

XP_030138538.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3528456-3528978:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3524721-3524846:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3522831-3522975:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3520222-3520345:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3512333-3512436:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3511203-3511299:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3510399-3510548:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3509515-3509698:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3508270-3508364:-1:exon

SLC7A6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: SLC7A6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Y+L amino acid transporter 2 isoform X1
translation: MAERTDYTKSQISLSEYSPVNKSERTDTHRAQDGDQNTMQLKKEISLLNGISLIVGNMIGSGIFVSPKGVLIYSRSYGLSLIIWAVGGIFSVFGALCYAELGTTVTKSGASYAYILESFGSFIAFIRLWTSLLIVEPTSQAIIAITFANYIIQPFFPSCDPPYVACRLIAAACECLLTFINCAYVKWGTRVQDIFTYAKVAALIAIIIAGLVQICQGHTGHFKNSFEGSSSDIGEISLALYSALFSYSGWDTLNYVTEEIKNPERNLPLAIAVSMPIVTIIYIMTNIAYYTVLDADAVLSSDAVAVTFADRIFGIFSWTIPIAVAFSCFGGLNASILASSRLFFVGSREGHLPDLLSMIHIKRFTPVPALLFNCFMTLIYLAVEDVFKLINYFSFSYWFFVGLSIAGQLYLRWKEPDRPRPLKLSLAFPIIFCICTVFLVVVPLYSDFINSVIGIAIALSGIPFFFLGVYLPASRRPQFINKIMGAVTRNMQMLCYCVLTEMDPNEEKKPEIKTK
SIO_010081: SLC7A6
subclass of: SO_0000673
so part of: SLC7A6
location: complement(join(3508270..3508364,3509515..3509698,3510399..3510548,3511203..3511299,3512333..3512436,3520222..3520345,3522831..3522975,3524721..3524846,3528456..3528978))
location: region:3508270-3528978:-1
so has part: feature:3528456-3528978:-1:exon
so has part: feature:3524721-3524846:-1:exon
so has part: feature:3522831-3522975:-1:exon
so has part: feature:3520222-3520345:-1:exon
so has part: feature:3512333-3512436:-1:exon
so has part: feature:3511203-3511299:-1:exon
so has part: feature:3510399-3510548:-1:exon
so has part: feature:3509515-3509698:-1:exon
so has part: feature:3508270-3508364:-1:exon

XP_030138541.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3528456-3528978:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3524721-3524846:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3522831-3522975:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3520222-3520345:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3512333-3512436:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3511203-3511299:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3510399-3510548:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3509515-3509698:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3508270-3508364:-1:exon

LOC105758756
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC105758756
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3534249..3539725
location: region:3534249-3539725:1
so has part: feature:3534249-3539725:1:exon
subclass of: SO_0000010

105758756
type: Gene
SIO_000068: ncbigene

position:3534249:1
position: 3534249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3539725:1
position: 3539725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3534249-3539725:1:exon

LOC105758756
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC105758756
product: translation initiation factor IF-2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 132 samples with support for all annotated introns
transcript id: XM_041718495.1
SIO_010081: LOC105758756
subclass of: SO_0000673
so part of: LOC105758756
location: join(3534249..3534665,3536738..3536786,3539121..3539725)
location: region:3534249-3539725:1
so has part: feature:3534249-3534665:1:exon
so has part: feature:3536738-3536786:1:exon
so has part: feature:3539121-3539725:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3534249-3534665:1:exon

position:3534665:1
position: 3534665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3536738-3536786:1:exon

position:3536738:1
position: 3536738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3536786:1
position: 3536786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3539121-3539725:1:exon

position:3539121:1
position: 3539121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105758756
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC105758756
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: translation initiation factor IF-2
translation: MLSTRCHPRRDGGPSTPPPHAGIAVAASPPRRPGITASVTASSPFRGRNPLPSARSPRGRSRKGPTSAAGVARHPPVPAGAQGSVRRAGAAPRPAGCASAPPLPAAEESRDRLPRRRRSGGPASRFPAGAGWRGAPALTIT
SIO_010081: LOC105758756
subclass of: SO_0000673
so part of: LOC105758756
location: join(3534249..3534665,3536738..3536746)
location: region:3534249-3536746:1
so has part: feature:3534249-3534665:1:exon
so has part: feature:3536738-3536746:1:exon

XP_041574429.1
type: Protein
SIO_000068: ncbiprotein

position:3536746:1
position: 3536746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3534249-3534665:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3536738-3536746:1:exon

LOC115496886
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC115496886
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3542525..3560320)
location: region:3542525-3560320:-1
so has part: feature:3542525-3560320:-1:exon
subclass of: SO_0000010

115496886
type: Gene
SIO_000068: ncbigene

position:3542525:-1
position: 3542525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3560320:-1
position: 3560320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3542525-3560320:-1:exon

LOC115496886
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC115496886
product: receptor-interacting serine/threonine-protein kinase 2-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_030282684.3
SIO_010081: LOC115496886
subclass of: SO_0000673
so part of: LOC115496886
location: complement(join(3542525..3548885,3550194..3550346,3551258..3551381,3551669..3551737,3553225..3553310,3553649..3553810,3554894..3554943,3556676..3556824,3556965..3557120,3557337..3557490,3557805..3557970,3560154..3560320))
location: region:3542525-3560320:-1
so has part: feature:3560154-3560320:-1:exon
so has part: feature:3557805-3557970:-1:exon
so has part: feature:3557337-3557490:-1:exon
so has part: feature:3556965-3557120:-1:exon
so has part: feature:3556676-3556824:-1:exon
so has part: feature:3554894-3554943:-1:exon
so has part: feature:3553649-3553810:-1:exon
so has part: feature:3553225-3553310:-1:exon
so has part: feature:3551669-3551737:-1:exon
so has part: feature:3551258-3551381:-1:exon
so has part: feature:3550194-3550346:-1:exon
so has part: feature:3542525-3548885:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3560154-3560320:-1:exon

position:3560154:-1
position: 3560154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3557805-3557970:-1:exon

position:3557805:-1
position: 3557805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3557970:-1
position: 3557970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3557337-3557490:-1:exon

position:3557337:-1
position: 3557337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3557490:-1
position: 3557490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3556965-3557120:-1:exon

position:3556965:-1
position: 3556965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3557120:-1
position: 3557120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3556676-3556824:-1:exon

position:3556676:-1
position: 3556676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3556824:-1
position: 3556824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3554894-3554943:-1:exon

position:3554894:-1
position: 3554894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3554943:-1
position: 3554943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3553649-3553810:-1:exon

position:3553649:-1
position: 3553649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3553810:-1
position: 3553810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3553225-3553310:-1:exon

position:3553225:-1
position: 3553225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3553310:-1
position: 3553310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3551669-3551737:-1:exon

position:3551669:-1
position: 3551669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3551737:-1
position: 3551737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3551258-3551381:-1:exon

position:3551258:-1
position: 3551258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3551381:-1
position: 3551381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3550194-3550346:-1:exon

position:3550194:-1
position: 3550194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3550346:-1
position: 3550346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3542525-3548885:-1:exon

position:3548885:-1
position: 3548885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115496886
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC115496886
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: receptor-interacting serine/threonine-protein kinase 2-like
translation: MANPLPVVGQEDLESFTLTRTGSGFALKAFHISWNTPISVKLLASQDTTDREWKLLLQDIASVRCYESEHLLPLLGIYQCHGLVGIVTEWMNNGSLHSLIHEHQLYPELPFPLLIRILSDVAEGLHHLHSLEAALCHCSLKPSNVLLDVQYRAKISDYGLTNWKKQQLRSDLQNCQQRNCQDLVYLPPEILEGGLPSQKGDIYSFGILCWESLSRRKPFEGQTNLLDVLRGICSSLRPGISEKFIPSNLPERNRLLNLIALCWHQEPDYRPHTAECVHLLNGVLSSLNKEVISAAIYNLMDAKERALNACKGSETYTLQRGTCNSEIICPQKNNCLISKKIPLLVPSLSTVLLDSSANTAGRDNIEMGHPGSERRKSSSFCTNPSSVSAADKESRQHNSPALILQHRPQPMHLGQAVTGPCSKGNCCQILACQRQSILKCMTEGRLNHILDVLRSRQALSRVDYESITSCPTVTGRARALLDTCLCLGERAAQAVVTALSVSKSCPLGQITHXPDCPSKVNRLLLLIFFQSVYASEL
SIO_010081: LOC115496886
subclass of: SO_0000673
so part of: LOC115496886
location: complement(join(3548528..3548885,3550194..3550346,3551258..3551381,3551669..3551737,3553225..3553310,3553649..3553810,3554894..3554943,3556676..3556824,3556965..3557120,3557337..3557490,3557805..3557956))
location: region:3548528-3557956:-1
so has part: feature:3557805-3557956:-1:exon
so has part: feature:3557337-3557490:-1:exon
so has part: feature:3556965-3557120:-1:exon
so has part: feature:3556676-3556824:-1:exon
so has part: feature:3554894-3554943:-1:exon
so has part: feature:3553649-3553810:-1:exon
so has part: feature:3553225-3553310:-1:exon
so has part: feature:3551669-3551737:-1:exon
so has part: feature:3551258-3551381:-1:exon
so has part: feature:3550194-3550346:-1:exon
so has part: feature:3548528-3548885:-1:exon

XP_030138544.3
type: Protein
SIO_000068: ncbiprotein

position:3548528:-1
position: 3548528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3557956:-1
position: 3557956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3557805-3557956:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3557337-3557490:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3556965-3557120:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3556676-3556824:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3554894-3554943:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3553649-3553810:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3553225-3553310:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3551669-3551737:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3551258-3551381:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3550194-3550346:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3548528-3548885:-1:exon

OSGIN1
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: OSGIN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3596565..3607345
location: region:3596565-3607345:1
so has part: feature:3596565-3607345:1:exon
subclass of: SO_0000010

100229470
type: Gene
SIO_000068: ncbigene

position:3596565:1
position: 3596565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3607345:1
position: 3607345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3596565-3607345:1:exon

OSGIN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: OSGIN1
product: oxidative stress induced growth inhibitor 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 3 long SRA reads, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 86 samples with support for all annotated introns
transcript id: XM_002188955.5
SIO_010081: OSGIN1
subclass of: SO_0000673
so part of: OSGIN1
location: join(3596565..3596678,3600769..3600874,3603285..3603421,3603744..3603935,3604256..3604347,3605002..3607345)
location: region:3596565-3607345:1
so has part: feature:3596565-3596678:1:exon
so has part: feature:3600769-3600874:1:exon
so has part: feature:3603285-3603421:1:exon
so has part: feature:3603744-3603935:1:exon
so has part: feature:3604256-3604347:1:exon
so has part: feature:3605002-3607345:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3596565-3596678:1:exon

position:3596678:1
position: 3596678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3600769-3600874:1:exon

position:3600769:1
position: 3600769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3600874:1
position: 3600874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3603285-3603421:1:exon

position:3603285:1
position: 3603285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3603421:1
position: 3603421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3603744-3603935:1:exon

position:3603744:1
position: 3603744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3603935:1
position: 3603935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3604256-3604347:1:exon

position:3604256:1
position: 3604256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3604347:1
position: 3604347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3605002-3607345:1:exon

position:3605002:1
position: 3605002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

OSGIN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: OSGIN1
product: oxidative stress induced growth inhibitor 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_030282268.3
SIO_010081: OSGIN1
subclass of: SO_0000673
so part of: OSGIN1
location: join(3596571..3596678,3597072..3597188,3600769..3600874,3603285..3603421,3603744..3603935,3604256..3604347,3605002..3607345)
location: region:3596571-3607345:1
so has part: feature:3596571-3596678:1:exon
so has part: feature:3597072-3597188:1:exon
so has part: feature:3600769-3600874:1:exon
so has part: feature:3603285-3603421:1:exon
so has part: feature:3603744-3603935:1:exon
so has part: feature:3604256-3604347:1:exon
so has part: feature:3605002-3607345:1:exon

position:3596571:1
position: 3596571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3596571-3596678:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3597072-3597188:1:exon

position:3597072:1
position: 3597072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3597188:1
position: 3597188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3600769-3600874:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3603285-3603421:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3603744-3603935:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3604256-3604347:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3605002-3607345:1:exon

OSGIN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: OSGIN1
product: oxidative stress induced growth inhibitor 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_030282270.3
SIO_010081: OSGIN1
subclass of: SO_0000673
so part of: OSGIN1
location: join(3596571..3596678,3597072..3597188,3600772..3600874,3603285..3603421,3603744..3603935,3604256..3604347,3605002..3607345)
location: region:3596571-3607345:1
so has part: feature:3596571-3596678:1:exon
so has part: feature:3597072-3597188:1:exon
so has part: feature:3600772-3600874:1:exon
so has part: feature:3603285-3603421:1:exon
so has part: feature:3603744-3603935:1:exon
so has part: feature:3604256-3604347:1:exon
so has part: feature:3605002-3607345:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3596571-3596678:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3597072-3597188:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3600772-3600874:1:exon

position:3600772:1
position: 3600772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3603285-3603421:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3603744-3603935:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3604256-3604347:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3605002-3607345:1:exon

OSGIN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: OSGIN1
product: oxidative stress induced growth inhibitor 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 1 long SRA read, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 88 samples with support for all annotated introns
transcript id: XM_012570447.4
SIO_010081: OSGIN1
subclass of: SO_0000673
so part of: OSGIN1
location: join(3596572..3596678,3600772..3600874,3603285..3603421,3603744..3603935,3604256..3604347,3605002..3607345)
location: region:3596572-3607345:1
so has part: feature:3596572-3596678:1:exon
so has part: feature:3600772-3600874:1:exon
so has part: feature:3603285-3603421:1:exon
so has part: feature:3603744-3603935:1:exon
so has part: feature:3604256-3604347:1:exon
so has part: feature:3605002-3607345:1:exon

position:3596572:1
position: 3596572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3596572-3596678:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3600772-3600874:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3603285-3603421:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3603744-3603935:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3604256-3604347:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3605002-3607345:1:exon

OSGIN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: OSGIN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: oxidative stress-induced growth inhibitor 1
translation: MLPDGKMYPLVTRPSNRSGLKTLPVVIIGNGPSGICLSYFLSGYTPYFKRHALHPNPILQRKLEEAPEVSVLDQDLEYLSEGLEGRSHSPVALLFDTLQRPDTDFGGTAESVLTWWHEPDRAIPHLVLGRNAPGGAWHSIEGSMVTLSRGEWMGLPDVPFKEWLKQKRRGLKNNRATAEDIAQYYQHYVMKKGLQKNFRCGTVVTSVRKVSAESISSHTQKDLQEDSDSLWNSNERSAEVFQVDGFFKSVEGDKEPFSIYAENVVLATGTYDNPTWLGVKGENLSYVHHQLSALEEAVKSNSVGIMTDPVLIVGAGLTAADAILFAHHCNIPVIHVFRRRVTDPGLIFNQLPKTMYPEYHKVHQMMKEQTAACAGPYERYISLPEHHVLSFGKDKKCIFQDKNGCQKAYKISMALVLTGSNPNLSFLPNDGIDLALDSDQPVNSKRNPIDVDPFTYECTQEKGLYALGPLAGDNFVRFVQGGALAVASSLLKKANKNPP
SIO_010081: OSGIN1
subclass of: SO_0000673
so part of: OSGIN1
location: join(3600790..3600874,3603285..3603421,3603744..3603935,3604256..3604347,3605002..3605995)
location: region:3600790-3605995:1
so has part: feature:3600790-3600874:1:exon
so has part: feature:3603285-3603421:1:exon
so has part: feature:3603744-3603935:1:exon
so has part: feature:3604256-3604347:1:exon
so has part: feature:3605002-3605995:1:exon

XP_030138128.3
type: Protein
SIO_000068: ncbiprotein

position:3600790:1
position: 3600790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3605995:1
position: 3605995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3600790-3600874:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3603285-3603421:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3603744-3603935:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3604256-3604347:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3605002-3605995:1:exon

OSGIN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: OSGIN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: oxidative stress-induced growth inhibitor 1
translation: MLPDGKMYPLVTRPSNRSGLKTLPVVIIGNGPSGICLSYFLSGYTPYFKRHALHPNPILQRKLEEAPEVSVLDQDLEYLSEGLEGRSHSPVALLFDTLQRPDTDFGGTAESVLTWWHEPDRAIPHLVLGRNAPGGAWHSIEGSMVTLSRGEWMGLPDVPFKEWLKQKRRGLKNNRATAEDIAQYYQHYVMKKGLQKNFRCGTVVTSVRKVSAESISSHTQKDLQEDSDSLWNSNERSAEVFQVDGFFKSVEGDKEPFSIYAENVVLATGTYDNPTWLGVKGENLSYVHHQLSALEEAVKSNSVGIMTDPVLIVGAGLTAADAILFAHHCNIPVIHVFRRRVTDPGLIFNQLPKTMYPEYHKVHQMMKEQTAACAGPYERYISLPEHHVLSFGKDKKCIFQDKNGCQKAYKISMALVLTGSNPNLSFLPNDGIDLALDSDQPVNSKRNPIDVDPFTYECTQEKGLYALGPLAGDNFVRFVQGGALAVASSLLKKANKNPP
SIO_010081: OSGIN1
subclass of: SO_0000673
so part of: OSGIN1
location: join(3600790..3600874,3603285..3603421,3603744..3603935,3604256..3604347,3605002..3605995)
location: region:3600790-3605995:1
so has part: feature:3600790-3600874:1:exon
so has part: feature:3603285-3603421:1:exon
so has part: feature:3603744-3603935:1:exon
so has part: feature:3604256-3604347:1:exon
so has part: feature:3605002-3605995:1:exon

XP_012425901.4
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3600790-3600874:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3603285-3603421:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3603744-3603935:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3604256-3604347:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3605002-3605995:1:exon

OSGIN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: OSGIN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: oxidative stress-induced growth inhibitor 1
translation: MLPDGKMYPLVTRPSNRSGLKTLPVVIIGNGPSGICLSYFLSGYTPYFKRHALHPNPILQRKLEEAPEVSVLDQDLEYLSEGLEGRSHSPVALLFDTLQRPDTDFGGTAESVLTWWHEPDRAIPHLVLGRNAPGGAWHSIEGSMVTLSRGEWMGLPDVPFKEWLKQKRRGLKNNRATAEDIAQYYQHYVMKKGLQKNFRCGTVVTSVRKVSAESISSHTQKDLQEDSDSLWNSNERSAEVFQVDGFFKSVEGDKEPFSIYAENVVLATGTYDNPTWLGVKGENLSYVHHQLSALEEAVKSNSVGIMTDPVLIVGAGLTAADAILFAHHCNIPVIHVFRRRVTDPGLIFNQLPKTMYPEYHKVHQMMKEQTAACAGPYERYISLPEHHVLSFGKDKKCIFQDKNGCQKAYKISMALVLTGSNPNLSFLPNDGIDLALDSDQPVNSKRNPIDVDPFTYECTQEKGLYALGPLAGDNFVRFVQGGALAVASSLLKKANKNPP
SIO_010081: OSGIN1
subclass of: SO_0000673
so part of: OSGIN1
location: join(3600790..3600874,3603285..3603421,3603744..3603935,3604256..3604347,3605002..3605995)
location: region:3600790-3605995:1
so has part: feature:3600790-3600874:1:exon
so has part: feature:3603285-3603421:1:exon
so has part: feature:3603744-3603935:1:exon
so has part: feature:3604256-3604347:1:exon
so has part: feature:3605002-3605995:1:exon

XP_030138130.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3600790-3600874:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3603285-3603421:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3603744-3603935:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3604256-3604347:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3605002-3605995:1:exon

OSGIN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: OSGIN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: oxidative stress-induced growth inhibitor 1
translation: MLPDGKMYPLVTRPSNRSGLKTLPVVIIGNGPSGICLSYFLSGYTPYFKRHALHPNPILQRKLEEAPEVSVLDQDLEYLSEGLEGRSHSPVALLFDTLQRPDTDFGGTAESVLTWWHEPDRAIPHLVLGRNAPGGAWHSIEGSMVTLSRGEWMGLPDVPFKEWLKQKRRGLKNNRATAEDIAQYYQHYVMKKGLQKNFRCGTVVTSVRKVSAESISSHTQKDLQEDSDSLWNSNERSAEVFQVDGFFKSVEGDKEPFSIYAENVVLATGTYDNPTWLGVKGENLSYVHHQLSALEEAVKSNSVGIMTDPVLIVGAGLTAADAILFAHHCNIPVIHVFRRRVTDPGLIFNQLPKTMYPEYHKVHQMMKEQTAACAGPYERYISLPEHHVLSFGKDKKCIFQDKNGCQKAYKISMALVLTGSNPNLSFLPNDGIDLALDSDQPVNSKRNPIDVDPFTYECTQEKGLYALGPLAGDNFVRFVQGGALAVASSLLKKANKNPP
SIO_010081: OSGIN1
subclass of: SO_0000673
so part of: OSGIN1
location: join(3600790..3600874,3603285..3603421,3603744..3603935,3604256..3604347,3605002..3605995)
location: region:3600790-3605995:1
so has part: feature:3600790-3600874:1:exon
so has part: feature:3603285-3603421:1:exon
so has part: feature:3603744-3603935:1:exon
so has part: feature:3604256-3604347:1:exon
so has part: feature:3605002-3605995:1:exon

XP_002188991.5
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3600790-3600874:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3603285-3603421:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3603744-3603935:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3604256-3604347:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3605002-3605995:1:exon

NECAB2
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: NECAB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3626033..3698897
location: region:3626033-3698897:1
so has part: feature:3626033-3698897:1:exon
subclass of: SO_0000010

100217954
type: Gene
SIO_000068: ncbigene

position:3626033:1
position: 3626033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3698897:1
position: 3698897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3626033-3698897:1:exon

NECAB2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: NECAB2
product: N-terminal EF-hand calcium binding protein 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 1 long SRA read, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 86 samples with support for all annotated introns
transcript id: XM_002191161.6
SIO_010081: NECAB2
subclass of: SO_0000673
so part of: NECAB2
location: join(3626033..3626274,3634937..3634961,3662275..3662383,3680512..3680537,3683166..3683263,3693488..3693624,3696169..3696287,3696405..3696484,3696786..3696842,3696941..3697053,3697356..3697433,3697804..3697895,3698086..3698897)
location: region:3626033-3698897:1
so has part: feature:3626033-3626274:1:exon
so has part: feature:3634937-3634961:1:exon
so has part: feature:3662275-3662383:1:exon
so has part: feature:3680512-3680537:1:exon
so has part: feature:3683166-3683263:1:exon
so has part: feature:3693488-3693624:1:exon
so has part: feature:3696169-3696287:1:exon
so has part: feature:3696405-3696484:1:exon
so has part: feature:3696786-3696842:1:exon
so has part: feature:3696941-3697053:1:exon
so has part: feature:3697356-3697433:1:exon
so has part: feature:3697804-3697895:1:exon
so has part: feature:3698086-3698897:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3626033-3626274:1:exon

position:3626274:1
position: 3626274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3634937-3634961:1:exon

position:3634937:1
position: 3634937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3634961:1
position: 3634961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3662275-3662383:1:exon

position:3662275:1
position: 3662275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3662383:1
position: 3662383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3680512-3680537:1:exon

position:3680512:1
position: 3680512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3680537:1
position: 3680537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3683166-3683263:1:exon

position:3683166:1
position: 3683166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3683263:1
position: 3683263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3693488-3693624:1:exon

position:3693488:1
position: 3693488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3693624:1
position: 3693624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3696169-3696287:1:exon

position:3696169:1
position: 3696169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3696287:1
position: 3696287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3696405-3696484:1:exon

position:3696405:1
position: 3696405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3696484:1
position: 3696484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3696786-3696842:1:exon

position:3696786:1
position: 3696786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3696842:1
position: 3696842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3696941-3697053:1:exon

position:3696941:1
position: 3696941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3697053:1
position: 3697053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3697356-3697433:1:exon

position:3697356:1
position: 3697356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3697433:1
position: 3697433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3697804-3697895:1:exon

position:3697804:1
position: 3697804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3697895:1
position: 3697895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3698086-3698897:1:exon

position:3698086:1
position: 3698086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NECAB2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: NECAB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: N-terminal EF-hand calcium-binding protein 2
translation: MCEQAARYCRAGVQKLLRKPAPALRGLDGLLRWAAGRMGDKGLADRELLAPGAAAAQRKGTSVILDIFRRADKNDDGKLSLEEFQAFFSDGTLNEEELEKLFHTIDSDNTNNVDTKELCDYFADHMGDYEDVLASLEMLNLSILKAMDYTKRVYESGSNVEQFVTRFLLKETANQTQSLLSSVESAVDAIDEQTNPARHYPSKDGHGLSDTWYDNPVPSYSPTTWMVSREQGKNFQAGSPDTKAEGLEGQINRLAKLIGKLEDKTLWFDLHQRLSDSESTACTYLLLVRNEMTVSHKHLGEFCSSLKQYLKSVAGERDCFHVTAVKLPDGVTFVVYEFWETEEDWKRHLQSATCKSFQHVKVDTLSQPEAISSVAVPAAWCTLSRE
SIO_010081: NECAB2
subclass of: SO_0000673
so part of: NECAB2
location: join(3626077..3626274,3634937..3634961,3662275..3662383,3680512..3680537,3683166..3683263,3693488..3693624,3696169..3696287,3696405..3696484,3696786..3696842,3696941..3697053,3697356..3697433,3697804..3697895,3698086..3698114)
location: region:3626077-3698114:1
so has part: feature:3626077-3626274:1:exon
so has part: feature:3634937-3634961:1:exon
so has part: feature:3662275-3662383:1:exon
so has part: feature:3680512-3680537:1:exon
so has part: feature:3683166-3683263:1:exon
so has part: feature:3693488-3693624:1:exon
so has part: feature:3696169-3696287:1:exon
so has part: feature:3696405-3696484:1:exon
so has part: feature:3696786-3696842:1:exon
so has part: feature:3696941-3697053:1:exon
so has part: feature:3697356-3697433:1:exon
so has part: feature:3697804-3697895:1:exon
so has part: feature:3698086-3698114:1:exon

XP_002191197.4
type: Protein
SIO_000068: ncbiprotein

position:3626077:1
position: 3626077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3698114:1
position: 3698114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3626077-3626274:1:exon