Taeniopygia guttata isolate Blue55 chromosome 4A, bTaeGut1.4.pri, whole genome shotgun sequence.
type: Entry
definition: Taeniopygia guttata isolate Blue55 chromosome 4A, bTaeGut1.4.pri, whole genome shotgun sequence.
sequence version: NC_044216.2
sequence date: 2021-05-26
sequence: sequence
division: CON
label: NC_044216.2
type: RefSeq
SIO_000068: refseq
dblink: PRJNA558048
dblink: SAMN02981239
keyword: WGS
keyword: RefSeq
source: Taeniopygia guttata (zebra finch)
organism: Taeniopygia guttata
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Taeniopygia.
reference: 1
references: 33911273
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM012086.2.\nOn May 24, 2021 this sequence version replaced NC_044216.1.\nAssembly name: bTaeGut1.4.pri\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2021/05/04. The original whole-genome shotgun project has the\naccession RRCB00000000.2.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 09-APR-2021\nAssembly Method :: FALCON v. 5.1.1; FALCON unzip v.\n Nov2017(uc4); Purge_dups v. 1.0.1;\n Scaff10X v. 4.1.0; Bionano Solve\n BspQI/BssSI v. 3.4; Salsa2 v. 2.2.; Arrow\n polishing v. variantCaller 2.3.3; Merfin\n filtering v. 0.1; longranger align v.\n 2.2.2; freebayes polishing v. 1.3.1;\n gEVAL manual curation v. 2021-04-09; VGP\n pipeline v. 1.7\nAssembly Name :: bTaeGut1.4.pri\nDiploid :: Principal Pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 88.2x\nSequencing Technology :: PacBio RSII; 10X Genomics linked reads;\n Bionano Genomics two enzymes; Arima\n Genomics Hi-C\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Taeniopygia guttata Annotation\n Release 106\nAnnotation Version :: 106\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.6\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 19491698
topology: linear
so has quality: SO_0000987
location: 1..19491698
location: region:1-19491698:1
RO_0002162: 59729

NC_044216
type: RefSeq
SIO_000068: refseq

PRJNA558048
type: BioProject
SIO_000068: bioproject

SAMN02981239
type: BioSample
SIO_000068: biosample

1
title: Towards complete and error-free genome assemblies of all vertebrate species
author: Rhie, A.
author: McCarthy, S.A.
author: Fedrigo, O.
author: Damas, J.
author: Formenti, G.
author: Koren, S.
author: Uliano-Silva, M.
author: Chow, W.
author: Fungtammasan, A.
author: Kim, J.
author: Lee, C.
author: Ko, B.J.
author: Chaisson, M.
author: Gedman, G.L.
author: Cantin, L.J.
author: Thibaud-Nissen, F.
author: Haggerty, L.
author: Bista, I.
author: Smith, M.
author: Haase, B.
author: Mountcastle, J.
author: Winkler, S.
author: Paez, S.
author: Howard, J.
author: Vernes, S.C.
author: Lama, T.M.
author: Grutzner, F.
author: Warren, W.C.
author: Balakrishnan, C.N.
author: Burt, D.
author: George, J.M.
author: Biegler, M.T.
author: Iorns, D.
author: Digby, A.
author: Eason, D.
author: Robertson, B.
author: Edwards, T.
author: Wilkinson, M.
author: Turner, G.
author: Meyer, A.
author: Kautt, A.F.
author: Franchini, P.
author: Detrich, H.W. 3rd
author: Svardal, H.
author: Wagner, M.
author: Naylor, G.J.P.
author: Pippel, M.
author: Malinsky, M.
author: Mooney, M.
author: Simbirsky, M.
author: Hannigan, B.T.
author: Pesout, T.
author: Houck, M.
author: Misuraca, A.
author: Kingan, S.B.
author: Hall, R.
author: Kronenberg, Z.
author: Sovic, I.
author: Dunn, C.
author: Ning, Z.
author: Hastie, A.
author: Lee, J.
author: Selvaraj, S.
author: Green, R.E.
author: Putnam, N.H.
author: Gut, I.
author: Ghurye, J.
author: Garrison, E.
author: Sims, Y.
author: Collins, J.
author: Pelan, S.
author: Torrance, J.
author: Tracey, A.
author: Wood, J.
author: Dagnew, R.E.
author: Guan, D.
author: London, S.E.
author: Clayton, D.F.

33911273
type: PubMed
SIO_000068: pubmed

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19491698:1
position: 19491698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-19491698:1:source
so part of: sequence
organism: Taeniopygia guttata
mol type: genomic DNA
isolate: Blue55
chromosome: 4A
sex: female
tissue type: Muscle, blood, brain
dev stage: adult
country: USA
lat lon: 36.0014 N 78.9382 W
collected by: Matt Biegler, Duke University and Rockefeller University

59729
type: Taxonomy
SIO_000068: taxonomy

LOC116808836
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC116808836
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 513..3404
location: region:513-3404:1
so has part: feature:513-3404:1:exon
subclass of: SO_0000011

116808836
type: Gene
SIO_000068: ncbigene

position:513:1
position: 513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3404:1
position: 3404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:513-3404:1:exon

LOC116808836
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC116808836
product: uncharacterized LOC116808836, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 45 samples with support for all annotated introns
transcript id: XR_005980349.1
SIO_010081: LOC116808836
subclass of: SO_0000673
so part of: LOC116808836
location: join(513..1429,1508..1549,1637..1965,2046..2815,2903..3070,3154..3225,3306..3404)
location: region:513-3404:1
so has part: feature:513-1429:1:exon
so has part: feature:1508-1549:1:exon
so has part: feature:1637-1965:1:exon
so has part: feature:2046-2815:1:exon
so has part: feature:2903-3070:1:exon
so has part: feature:3154-3225:1:exon
so has part: feature:3306-3404:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:513-1429:1:exon

position:1429:1
position: 1429
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 2
SIO_000628: feature:1508-1549:1:exon

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position: 1508
reference: sequence
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reference: sequence
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urn:…
SIO_000300: 3
SIO_000628: feature:1637-1965:1:exon

position:1637:1
position: 1637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1965:1
position: 1965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2046-2815:1:exon

position:2046:1
position: 2046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2815:1
position: 2815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2903-3070:1:exon

position:2903:1
position: 2903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3070:1
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reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3154-3225:1:exon

position:3154:1
position: 3154
reference: sequence
type: ForwardStrandPosition
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position:3225:1
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reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3306-3404:1:exon

position:3306:1
position: 3306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116808836
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC116808836
product: uncharacterized LOC116808836, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XR_005980350.1
SIO_010081: LOC116808836
subclass of: SO_0000673
so part of: LOC116808836
location: join(513..1429,1508..1549,1637..1965,2046..2699,2774..2815,2903..3070,3154..3225,3306..3404)
location: region:513-3404:1
so has part: feature:513-1429:1:exon
so has part: feature:1508-1549:1:exon
so has part: feature:1637-1965:1:exon
so has part: feature:2046-2699:1:exon
so has part: feature:2774-2815:1:exon
so has part: feature:2903-3070:1:exon
so has part: feature:3154-3225:1:exon
so has part: feature:3306-3404:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:513-1429:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1508-1549:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1637-1965:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2046-2699:1:exon

position:2699:1
position: 2699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2774-2815:1:exon

position:2774:1
position: 2774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2903-3070:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3154-3225:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3306-3404:1:exon

LOC116808661
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC116808661
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 18814..20267
location: region:18814-20267:1
so has part: feature:18814-20267:1:exon
subclass of: SO_0000011

116808661
type: Gene
SIO_000068: ncbigene

position:18814:1
position: 18814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20267:1
position: 20267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18814-20267:1:exon

LOC116808661
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC116808661
product: uncharacterized LOC116808661
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XR_005980351.1
SIO_010081: LOC116808661
subclass of: SO_0000673
so part of: LOC116808661
location: join(18814..18915,19003..19169,19251..19331,19412..20267)
location: region:18814-20267:1
so has part: feature:18814-18915:1:exon
so has part: feature:19003-19169:1:exon
so has part: feature:19251-19331:1:exon
so has part: feature:19412-20267:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:18814-18915:1:exon

position:18915:1
position: 18915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:19003-19169:1:exon

position:19003:1
position: 19003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19169:1
position: 19169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:19251-19331:1:exon

position:19251:1
position: 19251
reference: sequence
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type: ExactPosition

position:19331:1
position: 19331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:19412-20267:1:exon

position:19412:1
position: 19412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115495198
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC115495198
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(24160..30465)
location: region:24160-30465:-1
so has part: feature:24160-30465:-1:exon
subclass of: SO_0000010

115495198
type: Gene
SIO_000068: ncbigene

position:24160:-1
position: 24160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30465:-1
position: 30465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24160-30465:-1:exon

LOC115495198
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC115495198
product: uncharacterized LOC115495198, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_041716111.1
SIO_010081: LOC115495198
subclass of: SO_0000673
so part of: LOC115495198
location: complement(join(24160..25410,25492..25532,25614..25657,25765..25809,25903..25944,26023..27298,27379..27459,27543..27583,27695..27708,29060..29100,29201..30465))
location: region:24160-30465:-1
so has part: feature:29201-30465:-1:exon
so has part: feature:29060-29100:-1:exon
so has part: feature:27695-27708:-1:exon
so has part: feature:27543-27583:-1:exon
so has part: feature:27379-27459:-1:exon
so has part: feature:26023-27298:-1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:29201-30465:-1:exon

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urn:…
SIO_000300: 2
SIO_000628: feature:29060-29100:-1:exon

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position:29100:-1
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reference: sequence
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urn:…
SIO_000300: 3
SIO_000628: feature:27695-27708:-1:exon

position:27695:-1
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reference: sequence
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position:27708:-1
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reference: sequence
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urn:…
SIO_000300: 4
SIO_000628: feature:27543-27583:-1:exon

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type: ReverseStrandPosition
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position:27583:-1
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reference: sequence
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urn:…
SIO_000300: 5
SIO_000628: feature:27379-27459:-1:exon

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urn:…
SIO_000300: 6
SIO_000628: feature:26023-27298:-1:exon

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reference: sequence
type: ReverseStrandPosition
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position:27298:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 7
SIO_000628: feature:25903-25944:-1:exon

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reference: sequence
type: ReverseStrandPosition
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position:25944:-1
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reference: sequence
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urn:…
SIO_000300: 8
SIO_000628: feature:25765-25809:-1:exon

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reference: sequence
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urn:…
SIO_000300: 9
SIO_000628: feature:25614-25657:-1:exon

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urn:…
SIO_000300: 10
SIO_000628: feature:25492-25532:-1:exon

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reference: sequence
type: ReverseStrandPosition
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reference: sequence
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urn:…
SIO_000300: 11
SIO_000628: feature:24160-25410:-1:exon

position:25410:-1
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reference: sequence
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LOC115495198
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC115495198
product: uncharacterized LOC115495198, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_041716108.1
SIO_010081: LOC115495198
subclass of: SO_0000673
so part of: LOC115495198
location: complement(join(24160..25410,25492..25532,25614..25657,25765..25809,25903..25944,26023..27298,27379..27459,27543..27708,29060..29100,29201..30465))
location: region:24160-30465:-1
so has part: feature:29201-30465:-1:exon
so has part: feature:29060-29100:-1:exon
so has part: feature:27543-27708:-1:exon
so has part: feature:27379-27459:-1:exon
so has part: feature:26023-27298:-1:exon
so has part: feature:25903-25944:-1:exon
so has part: feature:25765-25809:-1:exon
so has part: feature:25614-25657:-1:exon
so has part: feature:25492-25532:-1:exon
so has part: feature:24160-25410:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:29201-30465:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:29060-29100:-1:exon

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SIO_000300: 3
SIO_000628: feature:27543-27708:-1:exon

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SIO_000300: 4
SIO_000628: feature:27379-27459:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:26023-27298:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:25903-25944:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:25765-25809:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:25614-25657:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:25492-25532:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:24160-25410:-1:exon

LOC115495198
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC115495198
product: uncharacterized LOC115495198, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_041716110.1
SIO_010081: LOC115495198
subclass of: SO_0000673
so part of: LOC115495198
location: complement(join(24160..25410,25492..25532,25614..25657,25765..25809,25903..25944,26023..27298,27379..27459,27543..27708,27796..28562,28643..28723,28807..28847,28959..28972,29060..29100,29201..30465))
location: region:24160-30465:-1
so has part: feature:29201-30465:-1:exon
so has part: feature:29060-29100:-1:exon
so has part: feature:28959-28972:-1:exon
so has part: feature:28807-28847:-1:exon
so has part: feature:28643-28723:-1:exon
so has part: feature:27796-28562:-1:exon
so has part: feature:27543-27708:-1:exon
so has part: feature:27379-27459:-1:exon
so has part: feature:26023-27298:-1:exon
so has part: feature:25903-25944:-1:exon
so has part: feature:25765-25809:-1:exon
so has part: feature:25614-25657:-1:exon
so has part: feature:25492-25532:-1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:29201-30465:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:29060-29100:-1:exon

urn:…
SIO_000300: 3
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reference: sequence
type: ReverseStrandPosition
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position:28972:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 4
SIO_000628: feature:28807-28847:-1:exon

position:28807:-1
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reference: sequence
type: ReverseStrandPosition
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position:28847:-1
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reference: sequence
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urn:…
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reference: sequence
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reference: sequence
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urn:…
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reference: sequence
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position: 28562
reference: sequence
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urn:…
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LOC115495198
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC115495198
product: uncharacterized LOC115495198, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_041716104.1
SIO_010081: LOC115495198
subclass of: SO_0000673
so part of: LOC115495198
location: complement(join(24160..25410,25492..25532,25614..25657,25765..25809,25903..25944,26023..27298,27379..27459,27543..27708,27796..27836,27937..28562,28643..28723,28807..28972,29060..29100,29201..30465))
location: region:24160-30465:-1
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urn:…
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position:27937:-1
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urn:…
SIO_000300: 6
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reference: sequence
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LOC115495198
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC115495198
product: uncharacterized LOC115495198, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_041716105.1
SIO_010081: LOC115495198
subclass of: SO_0000673
so part of: LOC115495198
location: complement(join(24160..25410,25492..25532,25614..25657,25765..25809,25903..25944,26023..27298,27379..27459,27543..27583,27695..27708,27796..28562,28643..28723,28807..28972,29060..29100,29201..30465))
location: region:24160-30465:-1
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urn:…
SIO_000300: 1
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SIO_000300: 2
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SIO_000300: 11
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SIO_000300: 12
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SIO_000300: 13
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SIO_000300: 14
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LOC115495198
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC115495198
product: uncharacterized LOC115495198, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_041716107.1
SIO_010081: LOC115495198
subclass of: SO_0000673
so part of: LOC115495198
location: complement(join(24160..25410,25492..25532,25614..25657,25765..25809,25903..25944,26023..26083,26673..26714,27200..27298,27379..27459,27543..27708,27796..28562,28643..28723,28807..28972,29060..29100,29201..30465))
location: region:24160-30465:-1
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urn:…
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urn:…
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position:27200:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 9
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position:26673:-1
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reference: sequence
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position:26714:-1
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reference: sequence
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urn:…
SIO_000300: 10
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position:26083:-1
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urn:…
SIO_000300: 11
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SIO_000300: 12
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LOC115495198
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC115495198
product: uncharacterized LOC115495198, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_041716106.1
SIO_010081: LOC115495198
subclass of: SO_0000673
so part of: LOC115495198
location: complement(join(24160..25410,25492..25532,25614..25657,25765..25809,25903..25944,26023..26714,27200..27298,27379..27459,27543..27708,27796..28562,28643..28723,28807..28972,29060..29100,29201..30465))
location: region:24160-30465:-1
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urn:…
SIO_000300: 1
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SIO_000300: 12
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LOC115495198
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC115495198
product: uncharacterized LOC115495198, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_041716102.1
SIO_010081: LOC115495198
subclass of: SO_0000673
so part of: LOC115495198
location: complement(join(24160..25410,25492..25532,25614..25657,25765..25809,25903..25944,26023..26083,26673..27298,27379..27459,27543..27708,27796..28562,28643..28723,28807..28972,29060..29100,29201..30465))
location: region:24160-30465:-1
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urn:…
SIO_000300: 1
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SIO_000300: 14
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LOC115495198
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC115495198
product: uncharacterized LOC115495198, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_041716103.1
SIO_010081: LOC115495198
subclass of: SO_0000673
so part of: LOC115495198
location: complement(join(24160..25410,25492..25532,25640..25657,25765..25809,25903..25944,26023..27298,27379..27459,27543..27708,27796..28562,28643..28723,28807..28972,29060..29100,29201..30465))
location: region:24160-30465:-1
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urn:…
SIO_000300: 1
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position:25640:-1
position: 25640
reference: sequence
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urn:…
SIO_000300: 12
SIO_000628: feature:25492-25532:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:24160-25410:-1:exon

LOC115495198
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC115495198
product: uncharacterized LOC115495198, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_041716101.1
SIO_010081: LOC115495198
subclass of: SO_0000673
so part of: LOC115495198
location: complement(join(24160..25410,25492..25532,25614..25657,25765..25809,25903..25944,26023..27298,27379..27459,27543..27708,27796..28562,28643..28723,28807..28972,29060..29100,29201..30465))
location: region:24160-30465:-1
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SIO_000300: 1
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urn:…
SIO_000300: 13
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LOC115495198
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC115495198
product: uncharacterized LOC115495198, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_041716109.1
SIO_010081: LOC115495198
subclass of: SO_0000673
so part of: LOC115495198
location: complement(join(24160..25410,25560..25657,25765..25809,25903..25944,26023..27298,27379..27459,27543..27708,27796..28562,28643..28723,28807..28972,29060..29100,29201..30465))
location: region:24160-30465:-1
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urn:…
SIO_000300: 1
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urn:…
SIO_000300: 10
SIO_000628: feature:25765-25809:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:25560-25657:-1:exon

position:25560:-1
position: 25560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:24160-25410:-1:exon

LOC115495198
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC115495198
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC115495198 isoform X4
translation: MGMRNKRLLRPHRGEGFLLITVQSCSGQSSSDVCPVTCLGCTLCSLGLSVLSSHQKLSLPVLSPRLSCCVSRVSAHICPGAALPCCIACNSTSPGDLKLVMQGVVWLYIVLGDCHKMFSTDKLSCSRFTLVLTSFQMQTVQIGGRRHQSWKVQADSSSQGQCPRELTQSPILVVRRNGRGVAVYPAMTASESKHARSMQAKNPGILRRMTKRWQLGLTRQGDGLLLQATGICIPRCVQDKWRVVTHRRDESGLPGWDFLEGVFLSVLEMGMCKKRLLRPPEGKASVLITVLRCAGQSSSGVCPVTCLWCILCSLGLSVLSSPQKQLSLSCPLVCHVVCHGCLHVFVPELLCPAA
SIO_010081: LOC115495198
subclass of: SO_0000673
so part of: LOC115495198
location: complement(join(26861..27298,27379..27459,27543..27583,27695..27708,29060..29100,29201..29650))
location: region:26861-29650:-1
so has part: feature:29201-29650:-1:exon
so has part: feature:29060-29100:-1:exon
so has part: feature:27695-27708:-1:exon
so has part: feature:27543-27583:-1:exon
so has part: feature:27379-27459:-1:exon
so has part: feature:26861-27298:-1:exon

XP_041572045.1
type: Protein
SIO_000068: ncbiprotein

position:26861:-1
position: 26861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29650:-1
position: 29650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29201-29650:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:29060-29100:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:27695-27708:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:27543-27583:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:27379-27459:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:26861-27298:-1:exon

LOC115495198
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC115495198
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC115495198 isoform X2
translation: MGMRNKRLLRPHRGEGFLLITVQSCSGQSSSDVCPVTCLGCTLCSLGLSVLSSHQKLSLPVLSPRLSCCVSRVSAHICPGAALPCCIACNSTSPGDLKLVMQGVVWLYIVLGDCHKMFSTDKLSCSRFTLVLTSFQMQTVQIGGRRHQSWKVQADSSSQGQCPRELTQSTHTSVTHWLLDQVSCTFDLAGSITGPCDGPSNFAFQGPILVVRRNGRGVAVYPAMTASESKHARSMQAKNPGILRRMTKRWQLGLTRQGDGLLLQATGICIPRCVQDKWRVVTHRRDESGLPGWDFLEGVFLSVLEMGMCKKRLLRPPEGKASVLITVLRCAGQSSSGVCPVTCLWCILCSLGLSVLSSPQKQLSLSCPLVCHVVCHGCLHVFVPELLCPAA
SIO_010081: LOC115495198
subclass of: SO_0000673
so part of: LOC115495198
location: complement(join(26861..27298,27379..27459,27543..27708,29060..29100,29201..29650))
location: region:26861-29650:-1
so has part: feature:29201-29650:-1:exon
so has part: feature:29060-29100:-1:exon
so has part: feature:27543-27708:-1:exon
so has part: feature:27379-27459:-1:exon
so has part: feature:26861-27298:-1:exon

XP_041572042.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29201-29650:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:29060-29100:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:27543-27708:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:27379-27459:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:26861-27298:-1:exon

LOC115495198
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC115495198
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC115495198 isoform X3
translation: MGMRNKRLLRPHRGEGFLLITVQSCSGQSSSDVCPVTCLGCTLCSLGLSVLSSHQKLSLPVLSPRLSCCVSRVSAHICPGAALPCCIACNSTSPGDLKLVMQGVVWLYIVLGDCHKMFSTDKLSCSRFTLVLTSFQMQTVQIGGRRHQSWKVQADSSSQGQCPRELTESPILVVRRNGRGVAVYPAMKASESKHARSMQAKNPGILRRMTKRWQLGLTRQGDGLLLQPTGICIPRCVQDKWRVVTHRRDESGLPGWDFLEGVFVSVLEMGMCKKHLLRPPEGKASVLITVLRCAGQSSSGVCPVTCLWCILCSLGLSVLSSPQKQLSLSCPLVCHVVCHGCLHVFVPELLCPAA
SIO_010081: LOC115495198
subclass of: SO_0000673
so part of: LOC115495198
location: complement(join(28125..28562,28643..28723,28807..28847,28959..28972,29060..29100,29201..29650))
location: region:28125-29650:-1
so has part: feature:29201-29650:-1:exon
so has part: feature:29060-29100:-1:exon
so has part: feature:28959-28972:-1:exon
so has part: feature:28807-28847:-1:exon
so has part: feature:28643-28723:-1:exon
so has part: feature:28125-28562:-1:exon

XP_041572044.1
type: Protein
SIO_000068: ncbiprotein

position:28125:-1
position: 28125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29201-29650:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:29060-29100:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:28959-28972:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:28807-28847:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:28643-28723:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:28125-28562:-1:exon

LOC115495198
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC115495198
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC115495198 isoform X1
translation: MGMRNKRLLRPHRGEGFLLITVQSCSGQSSSDVCPVTCLGCTLCSLGLSVLSSHQKLSLPVLSPRLSCCVSRVSAHICPGAALPCCIACNSTSPGDLKLVMQGVVWLYIVLGDCHKMFSTDKLSCSRFTLVLTSFQMQTVQIGGRRHQSWKVQADSSSQGQCPRELTESTHTSVTHWLLDQVSCTCDLAGSITGPCDGPSNFAFQGPILVVRRNGRGVAVYPAMKASESKHARSMQAKNPGILRRMTKRWQLGLTRQGDGLLLQPTGICIPRCVQDKWRVVTHRRDESGLPGWDFLEGVFVSVLEMGMCKKHLLRPPEGKASVLITVLRCAGQSSSGVCPVTCLWCILCSLGLSVLSSPQKQLSLSCPLVCHVVCHGCLHVFVPELLCPAA
SIO_010081: LOC115495198
subclass of: SO_0000673
so part of: LOC115495198
location: complement(join(28125..28562,28643..28723,28807..28972,29060..29100,29201..29650))
location: region:28125-29650:-1
so has part: feature:29201-29650:-1:exon
so has part: feature:29060-29100:-1:exon
so has part: feature:28807-28972:-1:exon
so has part: feature:28643-28723:-1:exon
so has part: feature:28125-28562:-1:exon

XP_041572035.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29201-29650:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:29060-29100:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:28807-28972:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:28643-28723:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:28125-28562:-1:exon

LOC115495198
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC115495198
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC115495198 isoform X1
translation: MGMRNKRLLRPHRGEGFLLITVQSCSGQSSSDVCPVTCLGCTLCSLGLSVLSSHQKLSLPVLSPRLSCCVSRVSAHICPGAALPCCIACNSTSPGDLKLVMQGVVWLYIVLGDCHKMFSTDKLSCSRFTLVLTSFQMQTVQIGGRRHQSWKVQADSSSQGQCPRELTESTHTSVTHWLLDQVSCTCDLAGSITGPCDGPSNFAFQGPILVVRRNGRGVAVYPAMKASESKHARSMQAKNPGILRRMTKRWQLGLTRQGDGLLLQPTGICIPRCVQDKWRVVTHRRDESGLPGWDFLEGVFVSVLEMGMCKKHLLRPPEGKASVLITVLRCAGQSSSGVCPVTCLWCILCSLGLSVLSSPQKQLSLSCPLVCHVVCHGCLHVFVPELLCPAA
SIO_010081: LOC115495198
subclass of: SO_0000673
so part of: LOC115495198
location: complement(join(28125..28562,28643..28723,28807..28972,29060..29100,29201..29650))
location: region:28125-29650:-1
so has part: feature:29201-29650:-1:exon
so has part: feature:29060-29100:-1:exon
so has part: feature:28807-28972:-1:exon
so has part: feature:28643-28723:-1:exon
so has part: feature:28125-28562:-1:exon

XP_041572036.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29201-29650:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:29060-29100:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:28807-28972:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:28643-28723:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:28125-28562:-1:exon

LOC115495198
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC115495198
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC115495198 isoform X1
translation: MGMRNKRLLRPHRGEGFLLITVQSCSGQSSSDVCPVTCLGCTLCSLGLSVLSSHQKLSLPVLSPRLSCCVSRVSAHICPGAALPCCIACNSTSPGDLKLVMQGVVWLYIVLGDCHKMFSTDKLSCSRFTLVLTSFQMQTVQIGGRRHQSWKVQADSSSQGQCPRELTESTHTSVTHWLLDQVSCTCDLAGSITGPCDGPSNFAFQGPILVVRRNGRGVAVYPAMKASESKHARSMQAKNPGILRRMTKRWQLGLTRQGDGLLLQPTGICIPRCVQDKWRVVTHRRDESGLPGWDFLEGVFVSVLEMGMCKKHLLRPPEGKASVLITVLRCAGQSSSGVCPVTCLWCILCSLGLSVLSSPQKQLSLSCPLVCHVVCHGCLHVFVPELLCPAA
SIO_010081: LOC115495198
subclass of: SO_0000673
so part of: LOC115495198
location: complement(join(28125..28562,28643..28723,28807..28972,29060..29100,29201..29650))
location: region:28125-29650:-1
so has part: feature:29201-29650:-1:exon
so has part: feature:29060-29100:-1:exon
so has part: feature:28807-28972:-1:exon
so has part: feature:28643-28723:-1:exon
so has part: feature:28125-28562:-1:exon

XP_041572037.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29201-29650:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:29060-29100:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:28807-28972:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:28643-28723:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:28125-28562:-1:exon

LOC115495198
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC115495198
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC115495198 isoform X1
translation: MGMRNKRLLRPHRGEGFLLITVQSCSGQSSSDVCPVTCLGCTLCSLGLSVLSSHQKLSLPVLSPRLSCCVSRVSAHICPGAALPCCIACNSTSPGDLKLVMQGVVWLYIVLGDCHKMFSTDKLSCSRFTLVLTSFQMQTVQIGGRRHQSWKVQADSSSQGQCPRELTESTHTSVTHWLLDQVSCTCDLAGSITGPCDGPSNFAFQGPILVVRRNGRGVAVYPAMKASESKHARSMQAKNPGILRRMTKRWQLGLTRQGDGLLLQPTGICIPRCVQDKWRVVTHRRDESGLPGWDFLEGVFVSVLEMGMCKKHLLRPPEGKASVLITVLRCAGQSSSGVCPVTCLWCILCSLGLSVLSSPQKQLSLSCPLVCHVVCHGCLHVFVPELLCPAA
SIO_010081: LOC115495198
subclass of: SO_0000673
so part of: LOC115495198
location: complement(join(28125..28562,28643..28723,28807..28972,29060..29100,29201..29650))
location: region:28125-29650:-1
so has part: feature:29201-29650:-1:exon
so has part: feature:29060-29100:-1:exon
so has part: feature:28807-28972:-1:exon
so has part: feature:28643-28723:-1:exon
so has part: feature:28125-28562:-1:exon

XP_041572038.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29201-29650:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:29060-29100:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:28807-28972:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:28643-28723:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:28125-28562:-1:exon

LOC115495198
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC115495198
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC115495198 isoform X1
translation: MGMRNKRLLRPHRGEGFLLITVQSCSGQSSSDVCPVTCLGCTLCSLGLSVLSSHQKLSLPVLSPRLSCCVSRVSAHICPGAALPCCIACNSTSPGDLKLVMQGVVWLYIVLGDCHKMFSTDKLSCSRFTLVLTSFQMQTVQIGGRRHQSWKVQADSSSQGQCPRELTESTHTSVTHWLLDQVSCTCDLAGSITGPCDGPSNFAFQGPILVVRRNGRGVAVYPAMKASESKHARSMQAKNPGILRRMTKRWQLGLTRQGDGLLLQPTGICIPRCVQDKWRVVTHRRDESGLPGWDFLEGVFVSVLEMGMCKKHLLRPPEGKASVLITVLRCAGQSSSGVCPVTCLWCILCSLGLSVLSSPQKQLSLSCPLVCHVVCHGCLHVFVPELLCPAA
SIO_010081: LOC115495198
subclass of: SO_0000673
so part of: LOC115495198
location: complement(join(28125..28562,28643..28723,28807..28972,29060..29100,29201..29650))
location: region:28125-29650:-1
so has part: feature:29201-29650:-1:exon
so has part: feature:29060-29100:-1:exon
so has part: feature:28807-28972:-1:exon
so has part: feature:28643-28723:-1:exon
so has part: feature:28125-28562:-1:exon

XP_041572039.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29201-29650:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:29060-29100:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:28807-28972:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:28643-28723:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:28125-28562:-1:exon

LOC115495198
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC115495198
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC115495198 isoform X1
translation: MGMRNKRLLRPHRGEGFLLITVQSCSGQSSSDVCPVTCLGCTLCSLGLSVLSSHQKLSLPVLSPRLSCCVSRVSAHICPGAALPCCIACNSTSPGDLKLVMQGVVWLYIVLGDCHKMFSTDKLSCSRFTLVLTSFQMQTVQIGGRRHQSWKVQADSSSQGQCPRELTESTHTSVTHWLLDQVSCTCDLAGSITGPCDGPSNFAFQGPILVVRRNGRGVAVYPAMKASESKHARSMQAKNPGILRRMTKRWQLGLTRQGDGLLLQPTGICIPRCVQDKWRVVTHRRDESGLPGWDFLEGVFVSVLEMGMCKKHLLRPPEGKASVLITVLRCAGQSSSGVCPVTCLWCILCSLGLSVLSSPQKQLSLSCPLVCHVVCHGCLHVFVPELLCPAA
SIO_010081: LOC115495198
subclass of: SO_0000673
so part of: LOC115495198
location: complement(join(28125..28562,28643..28723,28807..28972,29060..29100,29201..29650))
location: region:28125-29650:-1
so has part: feature:29201-29650:-1:exon
so has part: feature:29060-29100:-1:exon
so has part: feature:28807-28972:-1:exon
so has part: feature:28643-28723:-1:exon
so has part: feature:28125-28562:-1:exon

XP_041572040.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29201-29650:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:29060-29100:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:28807-28972:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:28643-28723:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:28125-28562:-1:exon

LOC115495198
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC115495198
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC115495198 isoform X1
translation: MGMRNKRLLRPHRGEGFLLITVQSCSGQSSSDVCPVTCLGCTLCSLGLSVLSSHQKLSLPVLSPRLSCCVSRVSAHICPGAALPCCIACNSTSPGDLKLVMQGVVWLYIVLGDCHKMFSTDKLSCSRFTLVLTSFQMQTVQIGGRRHQSWKVQADSSSQGQCPRELTESTHTSVTHWLLDQVSCTCDLAGSITGPCDGPSNFAFQGPILVVRRNGRGVAVYPAMKASESKHARSMQAKNPGILRRMTKRWQLGLTRQGDGLLLQPTGICIPRCVQDKWRVVTHRRDESGLPGWDFLEGVFVSVLEMGMCKKHLLRPPEGKASVLITVLRCAGQSSSGVCPVTCLWCILCSLGLSVLSSPQKQLSLSCPLVCHVVCHGCLHVFVPELLCPAA
SIO_010081: LOC115495198
subclass of: SO_0000673
so part of: LOC115495198
location: complement(join(28125..28562,28643..28723,28807..28972,29060..29100,29201..29650))
location: region:28125-29650:-1
so has part: feature:29201-29650:-1:exon
so has part: feature:29060-29100:-1:exon
so has part: feature:28807-28972:-1:exon
so has part: feature:28643-28723:-1:exon
so has part: feature:28125-28562:-1:exon

XP_041572041.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29201-29650:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:29060-29100:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:28807-28972:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:28643-28723:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:28125-28562:-1:exon

LOC115495198
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC115495198
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC115495198 isoform X1
translation: MGMRNKRLLRPHRGEGFLLITVQSCSGQSSSDVCPVTCLGCTLCSLGLSVLSSHQKLSLPVLSPRLSCCVSRVSAHICPGAALPCCIACNSTSPGDLKLVMQGVVWLYIVLGDCHKMFSTDKLSCSRFTLVLTSFQMQTVQIGGRRHQSWKVQADSSSQGQCPRELTESTHTSVTHWLLDQVSCTCDLAGSITGPCDGPSNFAFQGPILVVRRNGRGVAVYPAMKASESKHARSMQAKNPGILRRMTKRWQLGLTRQGDGLLLQPTGICIPRCVQDKWRVVTHRRDESGLPGWDFLEGVFVSVLEMGMCKKHLLRPPEGKASVLITVLRCAGQSSSGVCPVTCLWCILCSLGLSVLSSPQKQLSLSCPLVCHVVCHGCLHVFVPELLCPAA
SIO_010081: LOC115495198
subclass of: SO_0000673
so part of: LOC115495198
location: complement(join(28125..28562,28643..28723,28807..28972,29060..29100,29201..29650))
location: region:28125-29650:-1
so has part: feature:29201-29650:-1:exon
so has part: feature:29060-29100:-1:exon
so has part: feature:28807-28972:-1:exon
so has part: feature:28643-28723:-1:exon
so has part: feature:28125-28562:-1:exon

XP_041572043.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29201-29650:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:29060-29100:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:28807-28972:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:28643-28723:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:28125-28562:-1:exon

ADGRG4
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: ADGRG4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 30797..57029
location: region:30797-57029:1
so has part: feature:30797-57029:1:exon
subclass of: SO_0000010

105759134
type: Gene
SIO_000068: ncbigene

position:30797:1
position: 30797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:57029:1
position: 57029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30797-57029:1:exon

ADGRG4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: ADGRG4
product: adhesion G protein-coupled receptor G4, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030272347.3
SIO_010081: ADGRG4
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ADGRG4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: ADGRG4
product: adhesion G protein-coupled receptor G4, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_041716114.1
SIO_010081: ADGRG4
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ADGRG4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: ADGRG4
product: adhesion G protein-coupled receptor G4, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_041716117.1
SIO_010081: ADGRG4
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ADGRG4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: ADGRG4
product: adhesion G protein-coupled receptor G4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_041716112.1
SIO_010081: ADGRG4
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ADGRG4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: ADGRG4
product: adhesion G protein-coupled receptor G4, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_041716113.1
SIO_010081: ADGRG4
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ADGRG4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: ADGRG4
product: adhesion G protein-coupled receptor G4, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_041716115.1
SIO_010081: ADGRG4
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ADGRG4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: ADGRG4
product: adhesion G protein-coupled receptor G4, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_041716116.1
SIO_010081: ADGRG4
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so has part: feature:47001-47211:1:exon
so has part: feature:48328-48493:1:exon
so has part: feature:48615-48764:1:exon
so has part: feature:49572-49694:1:exon
so has part: feature:52368-52471:1:exon
so has part: feature:53873-54574:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:30797-30890:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:32163-34103:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:34831-35594:1:exon

position:35594:1
position: 35594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:36740-36789:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:37101-37196:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:41558-41652:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:42058-43197:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:44215-44359:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:45288-45420:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:45920-46038:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:47001-47211:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:48328-48493:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:48615-48764:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:49572-49694:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:52368-52471:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:53873-54574:1:exon

ADGRG4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: ADGRG4
product: adhesion G protein-coupled receptor G4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_030272342.3
SIO_010081: ADGRG4
subclass of: SO_0000673
so part of: ADGRG4
location: join(30800..30890,34051..34103,34831..36789,37101..37196,41558..41652,42058..43197,44215..44359,45288..45420,45920..46038,47001..47211,48328..48493,48615..48764,49572..49694,52368..52471,53873..54574)
location: region:30800-54574:1
so has part: feature:30800-30890:1:exon
so has part: feature:34051-34103:1:exon
so has part: feature:34831-36789:1:exon
so has part: feature:37101-37196:1:exon
so has part: feature:41558-41652:1:exon
so has part: feature:42058-43197:1:exon
so has part: feature:44215-44359:1:exon
so has part: feature:45288-45420:1:exon
so has part: feature:45920-46038:1:exon
so has part: feature:47001-47211:1:exon
so has part: feature:48328-48493:1:exon
so has part: feature:48615-48764:1:exon
so has part: feature:49572-49694:1:exon
so has part: feature:52368-52471:1:exon
so has part: feature:53873-54574:1:exon

position:30800:1
position: 30800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30800-30890:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:34051-34103:1:exon

position:34051:1
position: 34051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:34831-36789:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:37101-37196:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:41558-41652:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:42058-43197:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:44215-44359:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:45288-45420:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:45920-46038:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:47001-47211:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:48328-48493:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:48615-48764:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:49572-49694:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:52368-52471:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:53873-54574:1:exon

ADGRG4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: ADGRG4
product: adhesion G protein-coupled receptor G4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_030272340.3
SIO_010081: ADGRG4
subclass of: SO_0000673
so part of: ADGRG4
location: join(34383..34689,34831..36789,37101..37196,41558..41652,42058..43197,44215..44359,45288..45420,45920..46038,47001..47211,48328..48493,48615..48764,49572..49694,52368..52471,53873..54574)
location: region:34383-54574:1
so has part: feature:34383-34689:1:exon
so has part: feature:34831-36789:1:exon
so has part: feature:37101-37196:1:exon
so has part: feature:41558-41652:1:exon
so has part: feature:42058-43197:1:exon
so has part: feature:44215-44359:1:exon
so has part: feature:45288-45420:1:exon
so has part: feature:45920-46038:1:exon
so has part: feature:47001-47211:1:exon
so has part: feature:48328-48493:1:exon
so has part: feature:48615-48764:1:exon
so has part: feature:49572-49694:1:exon
so has part: feature:52368-52471:1:exon
so has part: feature:53873-54574:1:exon

position:34383:1
position: 34383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34383-34689:1:exon

position:34689:1
position: 34689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:34831-36789:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:37101-37196:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:41558-41652:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:42058-43197:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:44215-44359:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:45288-45420:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:45920-46038:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:47001-47211:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:48328-48493:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:48615-48764:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:49572-49694:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:52368-52471:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:53873-54574:1:exon

ADGRG4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: ADGRG4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: adhesion G-protein coupled receptor G4 isoform X1
translation: MYVKPEDVAVKSIALVGCQESFFLMRYKGNYSWPVTSPASKTEVSCRKNLLQSAQRSCEISIELEQAFWKKPNVAKCKLLEKLPNNILDLQDIKLTEENAQDVVQHILYLLPDATLHAEELEIIASKISDIVAFADLSVTLAESVLSILDYILLQEIEDENFGKITNSILKMTEEMGYKVTYTERNMSVITTSLALLVLCPDPSLFRGLAFGIASYNRSVDLKISVQENPFRKALASVFLPKSLKNFLGIKYSDPDKRSKIQFKFFGTTSFFLDDSLTLERLNTYVVSASIENASIQNLNEPVTVTLHHIDQNRMDWVVGIHRDVKWNIQI
SIO_010081: ADGRG4
subclass of: SO_0000673
so part of: ADGRG4
location: join(44320..44359,45288..45420,45920..46038,47001..47211,48328..48493,48615..48764,49572..49694,52368..52421)
location: region:44320-52421:1
so has part: feature:44320-44359:1:exon
so has part: feature:45288-45420:1:exon
so has part: feature:45920-46038:1:exon
so has part: feature:47001-47211:1:exon
so has part: feature:48328-48493:1:exon
so has part: feature:48615-48764:1:exon
so has part: feature:49572-49694:1:exon
so has part: feature:52368-52421:1:exon

XP_030128200.1
type: Protein
SIO_000068: ncbiprotein

position:44320:1
position: 44320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52421:1
position: 52421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44320-44359:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:45288-45420:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:45920-46038:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:47001-47211:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:48328-48493:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:48615-48764:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:49572-49694:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:52368-52421:1:exon

ADGRG4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: ADGRG4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: adhesion G-protein coupled receptor G4 isoform X1
translation: MYVKPEDVAVKSIALVGCQESFFLMRYKGNYSWPVTSPASKTEVSCRKNLLQSAQRSCEISIELEQAFWKKPNVAKCKLLEKLPNNILDLQDIKLTEENAQDVVQHILYLLPDATLHAEELEIIASKISDIVAFADLSVTLAESVLSILDYILLQEIEDENFGKITNSILKMTEEMGYKVTYTERNMSVITTSLALLVLCPDPSLFRGLAFGIASYNRSVDLKISVQENPFRKALASVFLPKSLKNFLGIKYSDPDKRSKIQFKFFGTTSFFLDDSLTLERLNTYVVSASIENASIQNLNEPVTVTLHHIDQNRMDWVVGIHRDVKWNIQI
SIO_010081: ADGRG4
subclass of: SO_0000673
so part of: ADGRG4
location: join(44320..44359,45288..45420,45920..46038,47001..47211,48328..48493,48615..48764,49572..49694,52368..52421)
location: region:44320-52421:1
so has part: feature:44320-44359:1:exon
so has part: feature:45288-45420:1:exon
so has part: feature:45920-46038:1:exon
so has part: feature:47001-47211:1:exon
so has part: feature:48328-48493:1:exon
so has part: feature:48615-48764:1:exon
so has part: feature:49572-49694:1:exon
so has part: feature:52368-52421:1:exon

XP_030128202.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44320-44359:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:45288-45420:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:45920-46038:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:47001-47211:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:48328-48493:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:48615-48764:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:49572-49694:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:52368-52421:1:exon

ADGRG4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: ADGRG4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: adhesion G-protein coupled receptor G4 isoform X1
translation: MYVKPEDVAVKSIALVGCQESFFLMRYKGNYSWPVTSPASKTEVSCRKNLLQSAQRSCEISIELEQAFWKKPNVAKCKLLEKLPNNILDLQDIKLTEENAQDVVQHILYLLPDATLHAEELEIIASKISDIVAFADLSVTLAESVLSILDYILLQEIEDENFGKITNSILKMTEEMGYKVTYTERNMSVITTSLALLVLCPDPSLFRGLAFGIASYNRSVDLKISVQENPFRKALASVFLPKSLKNFLGIKYSDPDKRSKIQFKFFGTTSFFLDDSLTLERLNTYVVSASIENASIQNLNEPVTVTLHHIDQNRMDWVVGIHRDVKWNIQI
SIO_010081: ADGRG4
subclass of: SO_0000673
so part of: ADGRG4
location: join(44320..44359,45288..45420,45920..46038,47001..47211,48328..48493,48615..48764,49572..49694,52368..52421)
location: region:44320-52421:1
so has part: feature:44320-44359:1:exon
so has part: feature:45288-45420:1:exon
so has part: feature:45920-46038:1:exon
so has part: feature:47001-47211:1:exon
so has part: feature:48328-48493:1:exon
so has part: feature:48615-48764:1:exon
so has part: feature:49572-49694:1:exon
so has part: feature:52368-52421:1:exon

XP_030128207.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44320-44359:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:45288-45420:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:45920-46038:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:47001-47211:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:48328-48493:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:48615-48764:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:49572-49694:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:52368-52421:1:exon

ADGRG4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: ADGRG4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: adhesion G-protein coupled receptor G4 isoform X1
translation: MYVKPEDVAVKSIALVGCQESFFLMRYKGNYSWPVTSPASKTEVSCRKNLLQSAQRSCEISIELEQAFWKKPNVAKCKLLEKLPNNILDLQDIKLTEENAQDVVQHILYLLPDATLHAEELEIIASKISDIVAFADLSVTLAESVLSILDYILLQEIEDENFGKITNSILKMTEEMGYKVTYTERNMSVITTSLALLVLCPDPSLFRGLAFGIASYNRSVDLKISVQENPFRKALASVFLPKSLKNFLGIKYSDPDKRSKIQFKFFGTTSFFLDDSLTLERLNTYVVSASIENASIQNLNEPVTVTLHHIDQNRMDWVVGIHRDVKWNIQI
SIO_010081: ADGRG4
subclass of: SO_0000673
so part of: ADGRG4
location: join(44320..44359,45288..45420,45920..46038,47001..47211,48328..48493,48615..48764,49572..49694,52368..52421)
location: region:44320-52421:1
so has part: feature:44320-44359:1:exon
so has part: feature:45288-45420:1:exon
so has part: feature:45920-46038:1:exon
so has part: feature:47001-47211:1:exon
so has part: feature:48328-48493:1:exon
so has part: feature:48615-48764:1:exon
so has part: feature:49572-49694:1:exon
so has part: feature:52368-52421:1:exon

XP_041572046.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44320-44359:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:45288-45420:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:45920-46038:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:47001-47211:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:48328-48493:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:48615-48764:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:49572-49694:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:52368-52421:1:exon

ADGRG4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: ADGRG4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: adhesion G-protein coupled receptor G4 isoform X1
translation: MYVKPEDVAVKSIALVGCQESFFLMRYKGNYSWPVTSPASKTEVSCRKNLLQSAQRSCEISIELEQAFWKKPNVAKCKLLEKLPNNILDLQDIKLTEENAQDVVQHILYLLPDATLHAEELEIIASKISDIVAFADLSVTLAESVLSILDYILLQEIEDENFGKITNSILKMTEEMGYKVTYTERNMSVITTSLALLVLCPDPSLFRGLAFGIASYNRSVDLKISVQENPFRKALASVFLPKSLKNFLGIKYSDPDKRSKIQFKFFGTTSFFLDDSLTLERLNTYVVSASIENASIQNLNEPVTVTLHHIDQNRMDWVVGIHRDVKWNIQI
SIO_010081: ADGRG4
subclass of: SO_0000673
so part of: ADGRG4
location: join(44320..44359,45288..45420,45920..46038,47001..47211,48328..48493,48615..48764,49572..49694,52368..52421)
location: region:44320-52421:1
so has part: feature:44320-44359:1:exon
so has part: feature:45288-45420:1:exon
so has part: feature:45920-46038:1:exon
so has part: feature:47001-47211:1:exon
so has part: feature:48328-48493:1:exon
so has part: feature:48615-48764:1:exon
so has part: feature:49572-49694:1:exon
so has part: feature:52368-52421:1:exon

XP_041572047.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44320-44359:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:45288-45420:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:45920-46038:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:47001-47211:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:48328-48493:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:48615-48764:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:49572-49694:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:52368-52421:1:exon

ADGRG4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: ADGRG4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: adhesion G-protein coupled receptor G4 isoform X1
translation: MYVKPEDVAVKSIALVGCQESFFLMRYKGNYSWPVTSPASKTEVSCRKNLLQSAQRSCEISIELEQAFWKKPNVAKCKLLEKLPNNILDLQDIKLTEENAQDVVQHILYLLPDATLHAEELEIIASKISDIVAFADLSVTLAESVLSILDYILLQEIEDENFGKITNSILKMTEEMGYKVTYTERNMSVITTSLALLVLCPDPSLFRGLAFGIASYNRSVDLKISVQENPFRKALASVFLPKSLKNFLGIKYSDPDKRSKIQFKFFGTTSFFLDDSLTLERLNTYVVSASIENASIQNLNEPVTVTLHHIDQNRMDWVVGIHRDVKWNIQI
SIO_010081: ADGRG4
subclass of: SO_0000673
so part of: ADGRG4
location: join(44320..44359,45288..45420,45920..46038,47001..47211,48328..48493,48615..48764,49572..49694,52368..52421)
location: region:44320-52421:1
so has part: feature:44320-44359:1:exon
so has part: feature:45288-45420:1:exon
so has part: feature:45920-46038:1:exon
so has part: feature:47001-47211:1:exon
so has part: feature:48328-48493:1:exon
so has part: feature:48615-48764:1:exon
so has part: feature:49572-49694:1:exon
so has part: feature:52368-52421:1:exon

XP_041572048.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44320-44359:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:45288-45420:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:45920-46038:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:47001-47211:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:48328-48493:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:48615-48764:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:49572-49694:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:52368-52421:1:exon

ADGRG4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: ADGRG4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: adhesion G-protein coupled receptor G4 isoform X1
translation: MYVKPEDVAVKSIALVGCQESFFLMRYKGNYSWPVTSPASKTEVSCRKNLLQSAQRSCEISIELEQAFWKKPNVAKCKLLEKLPNNILDLQDIKLTEENAQDVVQHILYLLPDATLHAEELEIIASKISDIVAFADLSVTLAESVLSILDYILLQEIEDENFGKITNSILKMTEEMGYKVTYTERNMSVITTSLALLVLCPDPSLFRGLAFGIASYNRSVDLKISVQENPFRKALASVFLPKSLKNFLGIKYSDPDKRSKIQFKFFGTTSFFLDDSLTLERLNTYVVSASIENASIQNLNEPVTVTLHHIDQNRMDWVVGIHRDVKWNIQI
SIO_010081: ADGRG4
subclass of: SO_0000673
so part of: ADGRG4
location: join(44320..44359,45288..45420,45920..46038,47001..47211,48328..48493,48615..48764,49572..49694,52368..52421)
location: region:44320-52421:1
so has part: feature:44320-44359:1:exon
so has part: feature:45288-45420:1:exon
so has part: feature:45920-46038:1:exon
so has part: feature:47001-47211:1:exon
so has part: feature:48328-48493:1:exon
so has part: feature:48615-48764:1:exon
so has part: feature:49572-49694:1:exon
so has part: feature:52368-52421:1:exon

XP_041572049.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44320-44359:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:45288-45420:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:45920-46038:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:47001-47211:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:48328-48493:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:48615-48764:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:49572-49694:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:52368-52421:1:exon

ADGRG4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: ADGRG4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: adhesion G-protein coupled receptor G4 isoform X1
translation: MYVKPEDVAVKSIALVGCQESFFLMRYKGNYSWPVTSPASKTEVSCRKNLLQSAQRSCEISIELEQAFWKKPNVAKCKLLEKLPNNILDLQDIKLTEENAQDVVQHILYLLPDATLHAEELEIIASKISDIVAFADLSVTLAESVLSILDYILLQEIEDENFGKITNSILKMTEEMGYKVTYTERNMSVITTSLALLVLCPDPSLFRGLAFGIASYNRSVDLKISVQENPFRKALASVFLPKSLKNFLGIKYSDPDKRSKIQFKFFGTTSFFLDDSLTLERLNTYVVSASIENASIQNLNEPVTVTLHHIDQNRMDWVVGIHRDVKWNIQI
SIO_010081: ADGRG4
subclass of: SO_0000673
so part of: ADGRG4
location: join(44320..44359,45288..45420,45920..46038,47001..47211,48328..48493,48615..48764,49572..49694,52368..52421)
location: region:44320-52421:1
so has part: feature:44320-44359:1:exon
so has part: feature:45288-45420:1:exon
so has part: feature:45920-46038:1:exon
so has part: feature:47001-47211:1:exon
so has part: feature:48328-48493:1:exon
so has part: feature:48615-48764:1:exon
so has part: feature:49572-49694:1:exon
so has part: feature:52368-52421:1:exon

XP_041572050.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44320-44359:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:45288-45420:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:45920-46038:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:47001-47211:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:48328-48493:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:48615-48764:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:49572-49694:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:52368-52421:1:exon

ADGRG4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: ADGRG4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: adhesion G-protein coupled receptor G4 isoform X2
translation: MYVKPEDVAVKSIALVGCQESFFLMRYKGNYSWPVTSPASKTEVSCRKNLLQSAQRSCEISIELEQAFWKKPNVAKCKLLEKLPNNILDLQDIKLTEENAQDVVQHILYLLPDATLHAEELEIIASKISDIVAFADLSVTLAESVLSILDYILLQEIEDENFGKITNSILKMTEEMGYKVTYTERNMSVITTSLALLVLCPDPSLFRGLAFGIASYNRSVDLKDDSLTLERLNTYVVSASIENASIQNLNEPVTVTLHHIDQNRMDWVVGIHRDVKWNIQI
SIO_010081: ADGRG4
subclass of: SO_0000673
so part of: ADGRG4
location: join(44320..44359,45288..45420,45920..46038,47001..47211,48328..48493,49572..49694,52368..52421)
location: region:44320-52421:1
so has part: feature:44320-44359:1:exon
so has part: feature:45288-45420:1:exon
so has part: feature:45920-46038:1:exon
so has part: feature:47001-47211:1:exon
so has part: feature:48328-48493:1:exon
so has part: feature:49572-49694:1:exon
so has part: feature:52368-52421:1:exon

XP_041572051.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44320-44359:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:45288-45420:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:45920-46038:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:47001-47211:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:48328-48493:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:49572-49694:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:52368-52421:1:exon

BRS3
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: BRS3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 57042..64224
location: region:57042-64224:1
so has part: feature:57042-64224:1:exon
subclass of: SO_0000010

121468023
type: Gene
SIO_000068: ncbigene

position:57042:1
position: 57042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:64224:1
position: 64224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57042-64224:1:exon

BRS3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: BRS3
product: bombesin receptor subtype 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 2 ESTs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 115 samples with support for all annotated introns
transcript id: XM_041716100.1
SIO_010081: BRS3
subclass of: SO_0000673
so part of: BRS3
location: join(57042..57670,60295..60646,61236..64224)
location: region:57042-64224:1
so has part: feature:57042-57670:1:exon
so has part: feature:60295-60646:1:exon
so has part: feature:61236-64224:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:57042-57670:1:exon

position:57670:1
position: 57670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:60295-60646:1:exon

position:60295:1
position: 60295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:60646:1
position: 60646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:61236-64224:1:exon

position:61236:1
position: 61236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

BRS3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: BRS3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bombesin receptor subtype-3
translation: MSQLYLQSANQTLCTSVDGTELKSSSDNETTNEKWIEDSFPGLEILCTIYVTYGVIISVGLLGNAILIKVFFKIKSMQTVPNIFITSLAFGDLLLLLTCVPIDATRYIVDTWLFGRIGCKLLSFIQLTSVGVSVFTLTVLSADRYRAIVKPLELQTSDALLKTCCKAGCVWIVSMIFAVPEAVFSDLYSFSNPEKNVTFEACAPYPVSEKILQEAHSLVCFLVFYIVPLAVISVYYVLIARTLYKSTSNMPAEEHSHAHKQIESRKRVAKTVLVLVALFAFCWLPNHILYLYRSFTYHTSVNASTYHLIATIFSRALAFSNSCVNPFALYWLSKTFRQHFKKQVSCYKAAFCAKPFSARQSCSPTRALSVTGSMHGSEVSVTLLTDYSITKEEESV
SIO_010081: BRS3
subclass of: SO_0000673
so part of: BRS3
location: join(57240..57670,60295..60646,61236..61643)
location: region:57240-61643:1
so has part: feature:57240-57670:1:exon
so has part: feature:60295-60646:1:exon
so has part: feature:61236-61643:1:exon

XP_041572034.1
type: Protein
SIO_000068: ncbiprotein

position:57240:1
position: 57240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:61643:1
position: 61643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57240-57670:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:60295-60646:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:61236-61643:1:exon

HTATSF1
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: HTATSF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 67604..82296
location: region:67604-82296:1
so has part: feature:67604-82296:1:exon
subclass of: SO_0000010

100219228
type: Gene
SIO_000068: ncbigene

position:67604:1
position: 67604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:82296:1
position: 82296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67604-82296:1:exon

HTATSF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: HTATSF1
product: HIV-1 Tat specific factor 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 12 ESTs, 2 long SRA reads, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 127 samples with support for all annotated introns
transcript id: XM_002189237.6
SIO_010081: HTATSF1
subclass of: SO_0000673
so part of: HTATSF1
location: join(67604..67926,71429..71633,71938..71985,73122..73276,74290..74453,76035..76134,76665..76754,77239..77376,77728..82296)
location: region:67604-82296:1
so has part: feature:67604-67926:1:exon
so has part: feature:71429-71633:1:exon
so has part: feature:71938-71985:1:exon
so has part: feature:73122-73276:1:exon
so has part: feature:74290-74453:1:exon
so has part: feature:76035-76134:1:exon
so has part: feature:76665-76754:1:exon
so has part: feature:77239-77376:1:exon
so has part: feature:77728-82296:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:67604-67926:1:exon

position:67926:1
position: 67926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:71429-71633:1:exon

position:71429:1
position: 71429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:71633:1
position: 71633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:71938-71985:1:exon

position:71938:1
position: 71938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:71985:1
position: 71985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:73122-73276:1:exon

position:73122:1
position: 73122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:73276:1
position: 73276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:74290-74453:1:exon

position:74290:1
position: 74290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:74453:1
position: 74453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:76035-76134:1:exon

position:76035:1
position: 76035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:76134:1
position: 76134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:76665-76754:1:exon

position:76665:1
position: 76665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:76754:1
position: 76754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:77239-77376:1:exon

position:77239:1
position: 77239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:77376:1
position: 77376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:77728-82296:1:exon

position:77728:1
position: 77728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HTATSF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: HTATSF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: HIV Tat-specific factor 1
translation: MSSEDGNEEFYRQLQLQQQYEAKPAGGEGESDPFTYVDPADGAAYEWDLEKKAWFPKITEDFLATYHANYGFHPDETDTSSASGTATESKQPVSSKESGTQPSANEMGQKQTDPKQKLEKRKLEPGWFHVEEDRNTNVYVTGLPPDITKDEFVQVMSKCGIIMRDPQTEEHKIKLYKDKEGNLKGDGLCCYLKRESVQLALRLLDEAEIRGYKLHVEVAKFQLKGEYDASKKKKKCKDYKKKLSQQQKQLDWRPEKKDGATRMRHERIIIIRNMFHPKDFEEDPLVLNEIREDLRTECEKFGQVKKVLIFDRHPDGVASVSFKEATEADLCKLTLNGRWFGGRQLSAETWDGVTDYQVEETAREREERLKVWESFLGDPDAKEQQTTSDSDSASSSVKLPEGKQPPEVNDTPKEDANDETHKRENNGEGIDENGAPSTDSSLAGSDGETDT
SIO_010081: HTATSF1
subclass of: SO_0000673
so part of: HTATSF1
location: join(67756..67926,71429..71633,71938..71985,73122..73276,74290..74453,76035..76134,76665..76754,77239..77376,77728..78012)
location: region:67756-78012:1
so has part: feature:67756-67926:1:exon
so has part: feature:71429-71633:1:exon
so has part: feature:71938-71985:1:exon
so has part: feature:73122-73276:1:exon
so has part: feature:74290-74453:1:exon
so has part: feature:76035-76134:1:exon
so has part: feature:76665-76754:1:exon
so has part: feature:77239-77376:1:exon
so has part: feature:77728-78012:1:exon

XP_002189273.1
type: Protein
SIO_000068: ncbiprotein

position:67756:1
position: 67756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:78012:1
position: 78012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67756-67926:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:71429-71633:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:71938-71985:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:73122-73276:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:74290-74453:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:76035-76134:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:76665-76754:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:77239-77376:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:77728-78012:1:exon

VGLL1
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: VGLL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 82447..93267
location: region:82447-93267:1
so has part: feature:82447-93267:1:exon
subclass of: SO_0000010

101234079
type: Gene
SIO_000068: ncbigene

position:82447:1
position: 82447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:93267:1
position: 93267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:82447-93267:1:exon

VGLL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: VGLL1
product: vestigial like family member 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_032748327.2
SIO_010081: VGLL1
subclass of: SO_0000673
so part of: VGLL1
location: join(82447..87395,87984..88403,90498..90557,91179..93267)
location: region:82447-93267:1
so has part: feature:82447-87395:1:exon
so has part: feature:87984-88403:1:exon
so has part: feature:90498-90557:1:exon
so has part: feature:91179-93267:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:82447-87395:1:exon

position:87395:1
position: 87395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:87984-88403:1:exon

position:87984:1
position: 87984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:88403:1
position: 88403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:90498-90557:1:exon

position:90498:1
position: 90498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:90557:1
position: 90557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:91179-93267:1:exon

position:91179:1
position: 91179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

VGLL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: VGLL1
product: vestigial like family member 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_032748328.2
SIO_010081: VGLL1
subclass of: SO_0000673
so part of: VGLL1
location: join(82447..87395,87987..88403,90498..90557,91179..93267)
location: region:82447-93267:1
so has part: feature:82447-87395:1:exon
so has part: feature:87987-88403:1:exon
so has part: feature:90498-90557:1:exon
so has part: feature:91179-93267:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:82447-87395:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:87987-88403:1:exon

position:87987:1
position: 87987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:90498-90557:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:91179-93267:1:exon

VGLL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: VGLL1
product: vestigial like family member 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_012572991.4
SIO_010081: VGLL1
subclass of: SO_0000673
so part of: VGLL1
location: join(82447..86507,87166..87395,87984..88403,90498..90557,91179..93267)
location: region:82447-93267:1
so has part: feature:82447-86507:1:exon
so has part: feature:87166-87395:1:exon
so has part: feature:87984-88403:1:exon
so has part: feature:90498-90557:1:exon
so has part: feature:91179-93267:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:82447-86507:1:exon

position:86507:1
position: 86507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:87166-87395:1:exon

position:87166:1
position: 87166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:87984-88403:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:90498-90557:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:91179-93267:1:exon

VGLL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: VGLL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription cofactor vestigial-like protein 1 isoform X1
translation: MEETRKISPKLSKSKEPVRTEWGSQSVVFTYFQGDINSMVDEHFSRALSNAKNPQDLSTKHKGETVILKNVDSLSPHQWNFSSHCYKPYPSPSSTSMANSALNFSAAGVVGQCQPSSLRSRPAQPADLWSFPPAGTPSVTSSVYPHTLPDLHTADELISDRKYSSLLGLLQQERCLTSMQECTMKQHSSSACMTGPARLQNMSQSSSPGGERRARLYQGSENPSVSHDTAGIQIHERRRDLYF
SIO_010081: VGLL1
subclass of: SO_0000673
so part of: VGLL1
location: join(87185..87395,87984..88403,90498..90557,91179..91219)
location: region:87185-91219:1
so has part: feature:87185-87395:1:exon
so has part: feature:87984-88403:1:exon
so has part: feature:90498-90557:1:exon
so has part: feature:91179-91219:1:exon

XP_012428445.2
type: Protein
SIO_000068: ncbiprotein

position:87185:1
position: 87185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:91219:1
position: 91219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:87185-87395:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:87984-88403:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:90498-90557:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:91179-91219:1:exon

VGLL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: VGLL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription cofactor vestigial-like protein 1 isoform X1
translation: MEETRKISPKLSKSKEPVRTEWGSQSVVFTYFQGDINSMVDEHFSRALSNAKNPQDLSTKHKGETVILKNVDSLSPHQWNFSSHCYKPYPSPSSTSMANSALNFSAAGVVGQCQPSSLRSRPAQPADLWSFPPAGTPSVTSSVYPHTLPDLHTADELISDRKYSSLLGLLQQERCLTSMQECTMKQHSSSACMTGPARLQNMSQSSSPGGERRARLYQGSENPSVSHDTAGIQIHERRRDLYF
SIO_010081: VGLL1
subclass of: SO_0000673
so part of: VGLL1
location: join(87185..87395,87984..88403,90498..90557,91179..91219)
location: region:87185-91219:1
so has part: feature:87185-87395:1:exon
so has part: feature:87984-88403:1:exon
so has part: feature:90498-90557:1:exon
so has part: feature:91179-91219:1:exon

XP_032604218.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:87185-87395:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:87984-88403:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:90498-90557:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:91179-91219:1:exon

VGLL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: VGLL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription cofactor vestigial-like protein 1 isoform X2
translation: MEETRKISPKLSKSKEPVRTEWGSQSVVFTYFQGDINSMVDEHFSRALSNAKNPQDLSTKHKGETVILKNDSLSPHQWNFSSHCYKPYPSPSSTSMANSALNFSAAGVVGQCQPSSLRSRPAQPADLWSFPPAGTPSVTSSVYPHTLPDLHTADELISDRKYSSLLGLLQQERCLTSMQECTMKQHSSSACMTGPARLQNMSQSSSPGGERRARLYQGSENPSVSHDTAGIQIHERRRDLYF
SIO_010081: VGLL1
subclass of: SO_0000673
so part of: VGLL1
location: join(87185..87395,87987..88403,90498..90557,91179..91219)
location: region:87185-91219:1
so has part: feature:87185-87395:1:exon
so has part: feature:87987-88403:1:exon
so has part: feature:90498-90557:1:exon
so has part: feature:91179-91219:1:exon

XP_032604219.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:87185-87395:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:87987-88403:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:90498-90557:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:91179-91219:1:exon

CD40LG
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: CD40LG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 106858..113888
location: region:106858-113888:1
so has part: feature:106858-113888:1:exon
subclass of: SO_0000010

100231712
type: Gene
SIO_000068: ncbigene

position:106858:1
position: 106858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:113888:1
position: 113888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:106858-113888:1:exon

CD40LG
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: CD40LG
product: CD40 ligand
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_002189453.6
SIO_010081: CD40LG
subclass of: SO_0000673
so part of: CD40LG
location: join(106858..107596,109383..109520,110638..110680,110981..111037,111305..111367,113249..113888)
location: region:106858-113888:1
so has part: feature:106858-107596:1:exon
so has part: feature:109383-109520:1:exon
so has part: feature:110638-110680:1:exon
so has part: feature:110981-111037:1:exon
so has part: feature:111305-111367:1:exon
so has part: feature:113249-113888:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:106858-107596:1:exon

position:107596:1
position: 107596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:109383-109520:1:exon

position:109383:1
position: 109383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:109520:1
position: 109520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:110638-110680:1:exon

position:110638:1
position: 110638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:110680:1
position: 110680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:110981-111037:1:exon

position:110981:1
position: 110981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:111037:1
position: 111037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:111305-111367:1:exon

position:111305:1
position: 111305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:111367:1
position: 111367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:113249-113888:1:exon

position:113249:1
position: 113249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CD40LG
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: CD40LG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CD40 ligand
translation: MNEPYGPEAPRPISSTSPGTMKMFMGFLTVFTIVQTIGTVLFCLYLHMKMDKMEEVLSLNEDYIFLKKVQKCQTVEGQKSTLLDCEKIIKGFEDIQCKDRPPKEQPKFEMQRGPEHHEHSRLMHKNETSVAAEKREPIAVHLAGQQSNKAGSVLEWRETMYGPTNSLISNKEGKLKVEEAGLYYIYSQVSFCTPEVSLAPFTLYIYLHIPKEEDRLLLKGQKTQSSLKTREEGHLKTLCELQSIRVGGVFNLREDDMVFVNVTDSTKVRYSHGNTYFGIFKL
SIO_010081: CD40LG
subclass of: SO_0000673
so part of: CD40LG
location: join(107441..107596,109383..109520,110638..110680,110981..111037,111305..111367,113249..113640)
location: region:107441-113640:1
so has part: feature:107441-107596:1:exon
so has part: feature:109383-109520:1:exon
so has part: feature:110638-110680:1:exon
so has part: feature:110981-111037:1:exon
so has part: feature:111305-111367:1:exon
so has part: feature:113249-113640:1:exon

XP_002189489.1
type: Protein
SIO_000068: ncbiprotein

position:107441:1
position: 107441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:113640:1
position: 113640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:107441-107596:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:109383-109520:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:110638-110680:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:110981-111037:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:111305-111367:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:113249-113640:1:exon

ARHGEF6
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: ARHGEF6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(117638..156595)
location: region:117638-156595:-1
so has part: feature:117638-156595:-1:exon
subclass of: SO_0000010

100228811
type: Gene
SIO_000068: ncbigene

position:117638:-1
position: 117638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:156595:-1
position: 156595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:117638-156595:-1:exon

ARHGEF6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: ARHGEF6
product: Rac/Cdc42 guanine nucleotide exchange factor 6, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 ESTs, 2 long SRA reads, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_030272358.3
SIO_010081: ARHGEF6
subclass of: SO_0000673
so part of: ARHGEF6
location: complement(join(117638..119952,120870..120924,121748..121847,122551..122640,123755..123848,127403..127528,127789..127922,128799..128877,129873..129959,130816..130962,133087..133146,134992..135130,136419..136541,137367..137462,138112..138206,139380..139450,142046..142247,142659..142786,147346..147430,155276..155359,156363..156595))
location: region:117638-156595:-1
so has part: feature:156363-156595:-1:exon
so has part: feature:155276-155359:-1:exon
so has part: feature:147346-147430:-1:exon
so has part: feature:142659-142786:-1:exon
so has part: feature:142046-142247:-1:exon
so has part: feature:139380-139450:-1:exon
so has part: feature:138112-138206:-1:exon
so has part: feature:137367-137462:-1:exon
so has part: feature:136419-136541:-1:exon
so has part: feature:134992-135130:-1:exon
so has part: feature:133087-133146:-1:exon
so has part: feature:130816-130962:-1:exon
so has part: feature:129873-129959:-1:exon
so has part: feature:128799-128877:-1:exon
so has part: feature:127789-127922:-1:exon
so has part: feature:127403-127528:-1:exon
so has part: feature:123755-123848:-1:exon
so has part: feature:122551-122640:-1:exon
so has part: feature:121748-121847:-1:exon
so has part: feature:120870-120924:-1:exon
so has part: feature:117638-119952:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:156363-156595:-1:exon

position:156363:-1
position: 156363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:155276-155359:-1:exon

position:155276:-1
position: 155276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:155359:-1
position: 155359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:147346-147430:-1:exon

position:147346:-1
position: 147346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:147430:-1
position: 147430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:142659-142786:-1:exon

position:142659:-1
position: 142659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:142786:-1
position: 142786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:142046-142247:-1:exon

position:142046:-1
position: 142046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:142247:-1
position: 142247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:139380-139450:-1:exon

position:139380:-1
position: 139380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:139450:-1
position: 139450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:138112-138206:-1:exon

position:138112:-1
position: 138112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:138206:-1
position: 138206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:137367-137462:-1:exon

position:137367:-1
position: 137367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:137462:-1
position: 137462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:136419-136541:-1:exon

position:136419:-1
position: 136419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:136541:-1
position: 136541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:134992-135130:-1:exon

position:134992:-1
position: 134992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:135130:-1
position: 135130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:133087-133146:-1:exon

position:133087:-1
position: 133087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:133146:-1
position: 133146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:130816-130962:-1:exon

position:130816:-1
position: 130816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:130962:-1
position: 130962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:129873-129959:-1:exon

position:129873:-1
position: 129873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:129959:-1
position: 129959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:128799-128877:-1:exon

position:128799:-1
position: 128799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:128877:-1
position: 128877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:127789-127922:-1:exon

position:127789:-1
position: 127789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:127922:-1
position: 127922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:127403-127528:-1:exon

position:127403:-1
position: 127403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:127528:-1
position: 127528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:123755-123848:-1:exon

position:123755:-1
position: 123755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:123848:-1
position: 123848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:122551-122640:-1:exon

position:122551:-1
position: 122551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:122640:-1
position: 122640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:121748-121847:-1:exon

position:121748:-1
position: 121748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:121847:-1
position: 121847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:120870-120924:-1:exon

position:120870:-1
position: 120870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:120924:-1
position: 120924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:117638-119952:-1:exon

position:119952:-1
position: 119952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ARHGEF6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: ARHGEF6
product: Rac/Cdc42 guanine nucleotide exchange factor 6, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 ESTs, 1 long SRA read, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_004175767.5
SIO_010081: ARHGEF6
subclass of: SO_0000673
so part of: ARHGEF6
location: complement(join(117638..119952,120870..120924,121748..121847,122551..122640,123755..123848,124661..124681,127403..127528,127789..127922,128799..128877,129873..129959,130816..130962,133087..133146,134992..135130,136419..136541,137367..137462,138112..138206,139380..139450,142046..142247,142659..142786,147346..147430,155276..155359,156363..156594))
location: region:117638-156594:-1
so has part: feature:156363-156594:-1:exon
so has part: feature:155276-155359:-1:exon
so has part: feature:147346-147430:-1:exon
so has part: feature:142659-142786:-1:exon
so has part: feature:142046-142247:-1:exon
so has part: feature:139380-139450:-1:exon
so has part: feature:138112-138206:-1:exon
so has part: feature:137367-137462:-1:exon
so has part: feature:136419-136541:-1:exon
so has part: feature:134992-135130:-1:exon
so has part: feature:133087-133146:-1:exon
so has part: feature:130816-130962:-1:exon
so has part: feature:129873-129959:-1:exon
so has part: feature:128799-128877:-1:exon
so has part: feature:127789-127922:-1:exon
so has part: feature:127403-127528:-1:exon
so has part: feature:124661-124681:-1:exon
so has part: feature:123755-123848:-1:exon
so has part: feature:122551-122640:-1:exon
so has part: feature:121748-121847:-1:exon
so has part: feature:120870-120924:-1:exon
so has part: feature:117638-119952:-1:exon

position:156594:-1
position: 156594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:156363-156594:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:155276-155359:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:147346-147430:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:142659-142786:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:142046-142247:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:139380-139450:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:138112-138206:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:137367-137462:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:136419-136541:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:134992-135130:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:133087-133146:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:130816-130962:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:129873-129959:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:128799-128877:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:127789-127922:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:127403-127528:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:124661-124681:-1:exon

position:124661:-1
position: 124661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:124681:-1
position: 124681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:123755-123848:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:122551-122640:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:121748-121847:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:120870-120924:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:117638-119952:-1:exon

ARHGEF6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: ARHGEF6
product: Rac/Cdc42 guanine nucleotide exchange factor 6, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 ESTs, 1 long SRA read, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_030272359.3
SIO_010081: ARHGEF6
subclass of: SO_0000673
so part of: ARHGEF6
location: complement(join(117638..119952,120870..120924,121748..121847,122551..122640,123755..123848,124661..124681,127403..127528,127789..127922,128799..128877,129873..129959,130816..130962,133087..133146,134992..135130,136419..136541,137367..137462,138112..138206,139380..139450,142046..142247,142659..142786,147346..147430,156363..156587))
location: region:117638-156587:-1
so has part: feature:156363-156587:-1:exon
so has part: feature:147346-147430:-1:exon
so has part: feature:142659-142786:-1:exon
so has part: feature:142046-142247:-1:exon
so has part: feature:139380-139450:-1:exon
so has part: feature:138112-138206:-1:exon
so has part: feature:137367-137462:-1:exon
so has part: feature:136419-136541:-1:exon
so has part: feature:134992-135130:-1:exon
so has part: feature:133087-133146:-1:exon
so has part: feature:130816-130962:-1:exon
so has part: feature:129873-129959:-1:exon
so has part: feature:128799-128877:-1:exon
so has part: feature:127789-127922:-1:exon
so has part: feature:127403-127528:-1:exon
so has part: feature:124661-124681:-1:exon
so has part: feature:123755-123848:-1:exon
so has part: feature:122551-122640:-1:exon
so has part: feature:121748-121847:-1:exon
so has part: feature:120870-120924:-1:exon
so has part: feature:117638-119952:-1:exon

position:156587:-1
position: 156587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:156363-156587:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:147346-147430:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:142659-142786:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:142046-142247:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:139380-139450:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:138112-138206:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:137367-137462:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:136419-136541:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:134992-135130:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:133087-133146:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:130816-130962:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:129873-129959:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:128799-128877:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:127789-127922:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:127403-127528:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:124661-124681:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:123755-123848:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:122551-122640:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:121748-121847:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:120870-120924:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:117638-119952:-1:exon

ARHGEF6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: ARHGEF6
product: Rac/Cdc42 guanine nucleotide exchange factor 6, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 ESTs, 3 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 51 samples with support for all annotated introns
transcript id: XM_030272360.3
SIO_010081: ARHGEF6
subclass of: SO_0000673
so part of: ARHGEF6
location: complement(join(117638..119952,120870..120924,121748..121847,122551..122640,123755..123848,124661..124681,127403..127528,127789..127922,128799..128877,129873..129959,130816..130962,133087..133146,134992..135130,136419..136541,137367..137462,138112..138206,139380..139450,142046..142247,142659..142786,147346..147430,150313..150468))
location: region:117638-150468:-1
so has part: feature:150313-150468:-1:exon
so has part: feature:147346-147430:-1:exon
so has part: feature:142659-142786:-1:exon
so has part: feature:142046-142247:-1:exon
so has part: feature:139380-139450:-1:exon
so has part: feature:138112-138206:-1:exon
so has part: feature:137367-137462:-1:exon
so has part: feature:136419-136541:-1:exon
so has part: feature:134992-135130:-1:exon
so has part: feature:133087-133146:-1:exon
so has part: feature:130816-130962:-1:exon
so has part: feature:129873-129959:-1:exon
so has part: feature:128799-128877:-1:exon
so has part: feature:127789-127922:-1:exon
so has part: feature:127403-127528:-1:exon
so has part: feature:124661-124681:-1:exon
so has part: feature:123755-123848:-1:exon
so has part: feature:122551-122640:-1:exon
so has part: feature:121748-121847:-1:exon
so has part: feature:120870-120924:-1:exon
so has part: feature:117638-119952:-1:exon

position:150468:-1
position: 150468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:150313-150468:-1:exon

position:150313:-1
position: 150313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:147346-147430:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:142659-142786:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:142046-142247:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:139380-139450:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:138112-138206:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:137367-137462:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:136419-136541:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:134992-135130:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:133087-133146:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:130816-130962:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:129873-129959:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:128799-128877:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:127789-127922:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:127403-127528:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:124661-124681:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:123755-123848:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:122551-122640:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:121748-121847:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:120870-120924:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:117638-119952:-1:exon

ARHGEF6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: ARHGEF6
product: Rac/Cdc42 guanine nucleotide exchange factor 6, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 ESTs, 2 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_041716118.1
SIO_010081: ARHGEF6
subclass of: SO_0000673
so part of: ARHGEF6
location: complement(join(117638..119952,120870..120924,121748..121847,122551..122640,123755..123848,124661..124681,127403..127528,127789..127922,128799..128877,129873..129959,130816..130962,133087..133146,134992..135130,136419..136541,137367..137462,138112..138206,139380..139450,142046..142247,142659..142786,150313..150418))
location: region:117638-150418:-1
so has part: feature:150313-150418:-1:exon
so has part: feature:142659-142786:-1:exon
so has part: feature:142046-142247:-1:exon
so has part: feature:139380-139450:-1:exon
so has part: feature:138112-138206:-1:exon
so has part: feature:137367-137462:-1:exon
so has part: feature:136419-136541:-1:exon
so has part: feature:134992-135130:-1:exon
so has part: feature:133087-133146:-1:exon
so has part: feature:130816-130962:-1:exon
so has part: feature:129873-129959:-1:exon
so has part: feature:128799-128877:-1:exon
so has part: feature:127789-127922:-1:exon
so has part: feature:127403-127528:-1:exon
so has part: feature:124661-124681:-1:exon
so has part: feature:123755-123848:-1:exon
so has part: feature:122551-122640:-1:exon
so has part: feature:121748-121847:-1:exon
so has part: feature:120870-120924:-1:exon
so has part: feature:117638-119952:-1:exon

position:150418:-1
position: 150418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:150313-150418:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:142659-142786:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:142046-142247:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:139380-139450:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:138112-138206:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:137367-137462:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:136419-136541:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:134992-135130:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:133087-133146:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:130816-130962:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:129873-129959:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:128799-128877:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:127789-127922:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:127403-127528:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:124661-124681:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:123755-123848:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:122551-122640:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:121748-121847:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:120870-120924:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:117638-119952:-1:exon

ARHGEF6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: ARHGEF6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor 6 isoform X3
translation: MNPEEQIVTWLISLGVLNSPKKIVDDPEGFLKTSLKDGTVLCKLINRLLPGSGEKVFDPHDLYTGDQFSKVLSTLTAVNKVTEDQLSKGPCSHLSSLNSVAGDPQSDSNGTATQSARVLRRQSKPVEMTENGSYQLVVKARFNFKQTNEDELSVNKGDIIYVTRVEEGGWWEGTLNGKTGWFPSNYVREIKSTDKPLSPKALKGLENTQLTKNYYPVVLQNILETERDYAKELQSLLGTYLRPLQSYDKLSTGDIVALLGNMEEISAFQQTLNQALEEVAKLPENQQRVGGCFMNLMPQFRSLYLTYCANHPSAVNVLTQHSDELEKFMESQGAASPGILILTTSLSKPFLRLDKYVTMLQELERHMEEAHADHEDVLKAITSFKSLVSQCQELRKRKQLELQILSESIQRWEGEDIKMMGNVIYMSQVMVQSGGSEEKEERYFLLFSNVLLMLSASPRMSGFIYQGKLPLTGMVLTKLEDAEGNEHMFEITGNTMERITVSCSTSQDLHEWLDHLQRLTKGTCSTVSKTQSWSPHSTFSSAGQIRGPLEPPKILKPWSLSCLRPAPPLRPSAALSYKERMSYILKDSSKSPKTMKKFLPKRKTERKPSDEEFVIRKSTAALEEDAQILKVIEAYCTGAGFQQALSSGSRKDSIPQVLLPEEEKIIIEETRSNGQTVTEEKSLVDTVYALKDEVKELKQENKRMKQCLEEELKSRKDLEKLVRRLLKQTDECGREDTGRKSSLIA
SIO_010081: ARHGEF6
subclass of: SO_0000673
so part of: ARHGEF6
location: complement(join(119812..119952,120870..120924,121748..121847,122551..122640,123755..123848,124661..124681,127403..127528,127789..127922,128799..128877,129873..129959,130816..130962,133087..133146,134992..135130,136419..136541,137367..137462,138112..138206,139380..139450,142046..142247,142659..142786,147346..147430,156363..156527))
location: region:119812-156527:-1
so has part: feature:156363-156527:-1:exon
so has part: feature:147346-147430:-1:exon
so has part: feature:142659-142786:-1:exon
so has part: feature:142046-142247:-1:exon
so has part: feature:139380-139450:-1:exon
so has part: feature:138112-138206:-1:exon
so has part: feature:137367-137462:-1:exon
so has part: feature:136419-136541:-1:exon
so has part: feature:134992-135130:-1:exon
so has part: feature:133087-133146:-1:exon
so has part: feature:130816-130962:-1:exon
so has part: feature:129873-129959:-1:exon
so has part: feature:128799-128877:-1:exon
so has part: feature:127789-127922:-1:exon
so has part: feature:127403-127528:-1:exon
so has part: feature:124661-124681:-1:exon
so has part: feature:123755-123848:-1:exon
so has part: feature:122551-122640:-1:exon
so has part: feature:121748-121847:-1:exon
so has part: feature:120870-120924:-1:exon
so has part: feature:119812-119952:-1:exon

XP_030128219.1
type: Protein
SIO_000068: ncbiprotein

position:119812:-1
position: 119812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:156527:-1
position: 156527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:156363-156527:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:147346-147430:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:142659-142786:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:142046-142247:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:139380-139450:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:138112-138206:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:137367-137462:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:136419-136541:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:134992-135130:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:133087-133146:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:130816-130962:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:129873-129959:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:128799-128877:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:127789-127922:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:127403-127528:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:124661-124681:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:123755-123848:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:122551-122640:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:121748-121847:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:120870-120924:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:119812-119952:-1:exon

ARHGEF6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: ARHGEF6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor 6 isoform X2
translation: MNPEEQIVTWLISLGVLNSPKKIVDDPEGFLKTSLKDGTVLCKLINRLLPGSGEKYCLEPKNEADCISNIQEFLKGCTLLKVEVFDPHDLYTGDQFSKVLSTLTAVNKVTEDQLSKGPCSHLSSLNSVAGDPQSDSNGTATQSARVLRRQSKPVEMTENGSYQLVVKARFNFKQTNEDELSVNKGDIIYVTRVEEGGWWEGTLNGKTGWFPSNYVREIKSTDKPLSPKALKGLENTQLTKNYYPVVLQNILETERDYAKELQSLLGTYLRPLQSYDKLSTGDIVALLGNMEEISAFQQTLNQALEEVAKLPENQQRVGGCFMNLMPQFRSLYLTYCANHPSAVNVLTQHSDELEKFMESQGAASPGILILTTSLSKPFLRLDKYVTMLQELERHMEEAHADHEDVLKAITSFKSLVSQCQELRKRKQLELQILSESIQRWEGEDIKMMGNVIYMSQVMVQSGGSEEKEERYFLLFSNVLLMLSASPRMSGFIYQGKLPLTGMVLTKLEDAEGNEHMFEITGNTMERITVSCSTSQDLHEWLDHLQRLTKGTCSTVSKTQSWSPHSTFSSAGQIRGPLEPPKILKPWSLSCLRPAPPLRPSAALSYKEDSSKSPKTMKKFLPKRKTERKPSDEEFVIRKSTAALEEDAQILKVIEAYCTGAGFQQALSSGSRKDSIPQVLLPEEEKIIIEETRSNGQTVTEEKSLVDTVYALKDEVKELKQENKRMKQCLEEELKSRKDLEKLVRRLLKQTDECGREDTGRKSSLIA
SIO_010081: ARHGEF6
subclass of: SO_0000673
so part of: ARHGEF6
location: complement(join(119812..119952,120870..120924,121748..121847,122551..122640,123755..123848,127403..127528,127789..127922,128799..128877,129873..129959,130816..130962,133087..133146,134992..135130,136419..136541,137367..137462,138112..138206,139380..139450,142046..142247,142659..142786,147346..147430,155276..155359,156363..156527))
location: region:119812-156527:-1
so has part: feature:156363-156527:-1:exon
so has part: feature:155276-155359:-1:exon
so has part: feature:147346-147430:-1:exon
so has part: feature:142659-142786:-1:exon
so has part: feature:142046-142247:-1:exon
so has part: feature:139380-139450:-1:exon
so has part: feature:138112-138206:-1:exon
so has part: feature:137367-137462:-1:exon
so has part: feature:136419-136541:-1:exon
so has part: feature:134992-135130:-1:exon
so has part: feature:133087-133146:-1:exon
so has part: feature:130816-130962:-1:exon
so has part: feature:129873-129959:-1:exon
so has part: feature:128799-128877:-1:exon
so has part: feature:127789-127922:-1:exon
so has part: feature:127403-127528:-1:exon
so has part: feature:123755-123848:-1:exon
so has part: feature:122551-122640:-1:exon
so has part: feature:121748-121847:-1:exon
so has part: feature:120870-120924:-1:exon
so has part: feature:119812-119952:-1:exon

XP_030128218.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:156363-156527:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:155276-155359:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:147346-147430:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:142659-142786:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:142046-142247:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:139380-139450:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:138112-138206:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:137367-137462:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:136419-136541:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:134992-135130:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:133087-133146:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:130816-130962:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:129873-129959:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:128799-128877:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:127789-127922:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:127403-127528:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:123755-123848:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:122551-122640:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:121748-121847:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:120870-120924:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:119812-119952:-1:exon

ARHGEF6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: ARHGEF6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor 6 isoform X1
translation: MNPEEQIVTWLISLGVLNSPKKIVDDPEGFLKTSLKDGTVLCKLINRLLPGSGEKYCLEPKNEADCISNIQEFLKGCTLLKVEVFDPHDLYTGDQFSKVLSTLTAVNKVTEDQLSKGPCSHLSSLNSVAGDPQSDSNGTATQSARVLRRQSKPVEMTENGSYQLVVKARFNFKQTNEDELSVNKGDIIYVTRVEEGGWWEGTLNGKTGWFPSNYVREIKSTDKPLSPKALKGLENTQLTKNYYPVVLQNILETERDYAKELQSLLGTYLRPLQSYDKLSTGDIVALLGNMEEISAFQQTLNQALEEVAKLPENQQRVGGCFMNLMPQFRSLYLTYCANHPSAVNVLTQHSDELEKFMESQGAASPGILILTTSLSKPFLRLDKYVTMLQELERHMEEAHADHEDVLKAITSFKSLVSQCQELRKRKQLELQILSESIQRWEGEDIKMMGNVIYMSQVMVQSGGSEEKEERYFLLFSNVLLMLSASPRMSGFIYQGKLPLTGMVLTKLEDAEGNEHMFEITGNTMERITVSCSTSQDLHEWLDHLQRLTKGTCSTVSKTQSWSPHSTFSSAGQIRGPLEPPKILKPWSLSCLRPAPPLRPSAALSYKERMSYILKDSSKSPKTMKKFLPKRKTERKPSDEEFVIRKSTAALEEDAQILKVIEAYCTGAGFQQALSSGSRKDSIPQVLLPEEEKIIIEETRSNGQTVTEEKSLVDTVYALKDEVKELKQENKRMKQCLEEELKSRKDLEKLVRRLLKQTDECGREDTGRKSSLIA
SIO_010081: ARHGEF6
subclass of: SO_0000673
so part of: ARHGEF6
location: complement(join(119812..119952,120870..120924,121748..121847,122551..122640,123755..123848,124661..124681,127403..127528,127789..127922,128799..128877,129873..129959,130816..130962,133087..133146,134992..135130,136419..136541,137367..137462,138112..138206,139380..139450,142046..142247,142659..142786,147346..147430,155276..155359,156363..156527))
location: region:119812-156527:-1
so has part: feature:156363-156527:-1:exon
so has part: feature:155276-155359:-1:exon
so has part: feature:147346-147430:-1:exon
so has part: feature:142659-142786:-1:exon
so has part: feature:142046-142247:-1:exon
so has part: feature:139380-139450:-1:exon
so has part: feature:138112-138206:-1:exon
so has part: feature:137367-137462:-1:exon
so has part: feature:136419-136541:-1:exon
so has part: feature:134992-135130:-1:exon
so has part: feature:133087-133146:-1:exon
so has part: feature:130816-130962:-1:exon
so has part: feature:129873-129959:-1:exon
so has part: feature:128799-128877:-1:exon
so has part: feature:127789-127922:-1:exon
so has part: feature:127403-127528:-1:exon
so has part: feature:124661-124681:-1:exon
so has part: feature:123755-123848:-1:exon
so has part: feature:122551-122640:-1:exon
so has part: feature:121748-121847:-1:exon
so has part: feature:120870-120924:-1:exon
so has part: feature:119812-119952:-1:exon

XP_004175815.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:156363-156527:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:155276-155359:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:147346-147430:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:142659-142786:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:142046-142247:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:139380-139450:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:138112-138206:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:137367-137462:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:136419-136541:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:134992-135130:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:133087-133146:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:130816-130962:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:129873-129959:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:128799-128877:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:127789-127922:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:127403-127528:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:124661-124681:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:123755-123848:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:122551-122640:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:121748-121847:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:120870-120924:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:119812-119952:-1:exon

ARHGEF6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: ARHGEF6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor 6 isoform X4
translation: MTENGSYQLVVKARFNFKQTNEDELSVNKGDIIYVTRVEEGGWWEGTLNGKTGWFPSNYVREIKSTDKPLSPKALKGLENTQLTKNYYPVVLQNILETERDYAKELQSLLGTYLRPLQSYDKLSTGDIVALLGNMEEISAFQQTLNQALEEVAKLPENQQRVGGCFMNLMPQFRSLYLTYCANHPSAVNVLTQHSDELEKFMESQGAASPGILILTTSLSKPFLRLDKYVTMLQELERHMEEAHADHEDVLKAITSFKSLVSQCQELRKRKQLELQILSESIQRWEGEDIKMMGNVIYMSQVMVQSGGSEEKEERYFLLFSNVLLMLSASPRMSGFIYQGKLPLTGMVLTKLEDAEGNEHMFEITGNTMERITVSCSTSQDLHEWLDHLQRLTKGTCSTVSKTQSWSPHSTFSSAGQIRGPLEPPKILKPWSLSCLRPAPPLRPSAALSYKERMSYILKDSSKSPKTMKKFLPKRKTERKPSDEEFVIRKSTAALEEDAQILKVIEAYCTGAGFQQALSSGSRKDSIPQVLLPEEEKIIIEETRSNGQTVTEEKSLVDTVYALKDEVKELKQENKRMKQCLEEELKSRKDLEKLVRRLLKQTDECGREDTGRKSSLIA
SIO_010081: ARHGEF6
subclass of: SO_0000673
so part of: ARHGEF6
location: complement(join(119812..119952,120870..120924,121748..121847,122551..122640,123755..123848,124661..124681,127403..127528,127789..127922,128799..128877,129873..129959,130816..130962,133087..133146,134992..135130,136419..136541,137367..137462,138112..138206,139380..139450,142046..142244))
location: region:119812-142244:-1
so has part: feature:142046-142244:-1:exon
so has part: feature:139380-139450:-1:exon
so has part: feature:138112-138206:-1:exon
so has part: feature:137367-137462:-1:exon
so has part: feature:136419-136541:-1:exon
so has part: feature:134992-135130:-1:exon
so has part: feature:133087-133146:-1:exon
so has part: feature:130816-130962:-1:exon
so has part: feature:129873-129959:-1:exon
so has part: feature:128799-128877:-1:exon
so has part: feature:127789-127922:-1:exon
so has part: feature:127403-127528:-1:exon
so has part: feature:124661-124681:-1:exon
so has part: feature:123755-123848:-1:exon
so has part: feature:122551-122640:-1:exon
so has part: feature:121748-121847:-1:exon
so has part: feature:120870-120924:-1:exon
so has part: feature:119812-119952:-1:exon

XP_030128220.1
type: Protein
SIO_000068: ncbiprotein

position:142244:-1
position: 142244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:142046-142244:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:139380-139450:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:138112-138206:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:137367-137462:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:136419-136541:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:134992-135130:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:133087-133146:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:130816-130962:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:129873-129959:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:128799-128877:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:127789-127922:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:127403-127528:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:124661-124681:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:123755-123848:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:122551-122640:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:121748-121847:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:120870-120924:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:119812-119952:-1:exon

ARHGEF6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: ARHGEF6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor 6 isoform X4
translation: MTENGSYQLVVKARFNFKQTNEDELSVNKGDIIYVTRVEEGGWWEGTLNGKTGWFPSNYVREIKSTDKPLSPKALKGLENTQLTKNYYPVVLQNILETERDYAKELQSLLGTYLRPLQSYDKLSTGDIVALLGNMEEISAFQQTLNQALEEVAKLPENQQRVGGCFMNLMPQFRSLYLTYCANHPSAVNVLTQHSDELEKFMESQGAASPGILILTTSLSKPFLRLDKYVTMLQELERHMEEAHADHEDVLKAITSFKSLVSQCQELRKRKQLELQILSESIQRWEGEDIKMMGNVIYMSQVMVQSGGSEEKEERYFLLFSNVLLMLSASPRMSGFIYQGKLPLTGMVLTKLEDAEGNEHMFEITGNTMERITVSCSTSQDLHEWLDHLQRLTKGTCSTVSKTQSWSPHSTFSSAGQIRGPLEPPKILKPWSLSCLRPAPPLRPSAALSYKERMSYILKDSSKSPKTMKKFLPKRKTERKPSDEEFVIRKSTAALEEDAQILKVIEAYCTGAGFQQALSSGSRKDSIPQVLLPEEEKIIIEETRSNGQTVTEEKSLVDTVYALKDEVKELKQENKRMKQCLEEELKSRKDLEKLVRRLLKQTDECGREDTGRKSSLIA
SIO_010081: ARHGEF6
subclass of: SO_0000673
so part of: ARHGEF6
location: complement(join(119812..119952,120870..120924,121748..121847,122551..122640,123755..123848,124661..124681,127403..127528,127789..127922,128799..128877,129873..129959,130816..130962,133087..133146,134992..135130,136419..136541,137367..137462,138112..138206,139380..139450,142046..142244))
location: region:119812-142244:-1
so has part: feature:142046-142244:-1:exon
so has part: feature:139380-139450:-1:exon
so has part: feature:138112-138206:-1:exon
so has part: feature:137367-137462:-1:exon
so has part: feature:136419-136541:-1:exon
so has part: feature:134992-135130:-1:exon
so has part: feature:133087-133146:-1:exon
so has part: feature:130816-130962:-1:exon
so has part: feature:129873-129959:-1:exon
so has part: feature:128799-128877:-1:exon
so has part: feature:127789-127922:-1:exon
so has part: feature:127403-127528:-1:exon
so has part: feature:124661-124681:-1:exon
so has part: feature:123755-123848:-1:exon
so has part: feature:122551-122640:-1:exon
so has part: feature:121748-121847:-1:exon
so has part: feature:120870-120924:-1:exon
so has part: feature:119812-119952:-1:exon

XP_041572052.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:142046-142244:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:139380-139450:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:138112-138206:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:137367-137462:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:136419-136541:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:134992-135130:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:133087-133146:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:130816-130962:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:129873-129959:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:128799-128877:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:127789-127922:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:127403-127528:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:124661-124681:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:123755-123848:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:122551-122640:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:121748-121847:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:120870-120924:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:119812-119952:-1:exon

RBMX
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: RBMX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(159298..174833)
location: region:159298-174833:-1
so has part: feature:159298-174833:-1:exon
subclass of: SO_0000010

100225951
type: Gene
SIO_000068: ncbigene

position:159298:-1
position: 159298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:174833:-1
position: 174833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:159298-174833:-1:exon

RBMX
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: RBMX
product: RNA binding motif protein X-linked, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 32 ESTs, 1 long SRA read, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 143 samples with support for all annotated introns
transcript id: XM_030272367.3
SIO_010081: RBMX
subclass of: SO_0000673
so part of: RBMX
location: complement(join(159298..164822,165327..165415,165507..165632,165749..165863,166198..166314,167384..167555,172978..173084,173282..173411,174745..174833))
location: region:159298-174833:-1
so has part: feature:174745-174833:-1:exon
so has part: feature:173282-173411:-1:exon
so has part: feature:172978-173084:-1:exon
so has part: feature:167384-167555:-1:exon
so has part: feature:166198-166314:-1:exon
so has part: feature:165749-165863:-1:exon
so has part: feature:165507-165632:-1:exon
so has part: feature:165327-165415:-1:exon
so has part: feature:159298-164822:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:174745-174833:-1:exon

position:174745:-1
position: 174745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:173282-173411:-1:exon

position:173282:-1
position: 173282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:173411:-1
position: 173411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:172978-173084:-1:exon

position:172978:-1
position: 172978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:173084:-1
position: 173084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:167384-167555:-1:exon

position:167384:-1
position: 167384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:167555:-1
position: 167555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:166198-166314:-1:exon

position:166198:-1
position: 166198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:166314:-1
position: 166314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:165749-165863:-1:exon

position:165749:-1
position: 165749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:165863:-1
position: 165863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:165507-165632:-1:exon

position:165507:-1
position: 165507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:165632:-1
position: 165632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:165327-165415:-1:exon

position:165327:-1
position: 165327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:165415:-1
position: 165415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:159298-164822:-1:exon

position:164822:-1
position: 164822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RBMX
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: RBMX
product: RNA binding motif protein X-linked, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 45 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 144 samples with support for all annotated introns
transcript id: XM_030272364.3
SIO_010081: RBMX
subclass of: SO_0000673
so part of: RBMX
location: complement(join(159298..164822,165327..165430,165507..165632,165749..165863,166198..166314,167384..167555,172978..173084,173282..173411,174745..174833))
location: region:159298-174833:-1
so has part: feature:174745-174833:-1:exon
so has part: feature:173282-173411:-1:exon
so has part: feature:172978-173084:-1:exon
so has part: feature:167384-167555:-1:exon
so has part: feature:166198-166314:-1:exon
so has part: feature:165749-165863:-1:exon
so has part: feature:165507-165632:-1:exon
so has part: feature:165327-165430:-1:exon
so has part: feature:159298-164822:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:174745-174833:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:173282-173411:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:172978-173084:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:167384-167555:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:166198-166314:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:165749-165863:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:165507-165632:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:165327-165430:-1:exon

position:165430:-1
position: 165430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:159298-164822:-1:exon

RBMX
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: RBMX
product: RNA binding motif protein X-linked, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 36 ESTs, 1 long SRA read, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 134 samples with support for all annotated introns
transcript id: XM_041716119.1
SIO_010081: RBMX
subclass of: SO_0000673
so part of: RBMX
location: complement(join(159298..164822,165327..165415,165507..165632,165749..165863,166198..166314,167384..167555,172978..173084,173282..173408,174745..174825))
location: region:159298-174825:-1
so has part: feature:174745-174825:-1:exon
so has part: feature:173282-173408:-1:exon
so has part: feature:172978-173084:-1:exon
so has part: feature:167384-167555:-1:exon
so has part: feature:166198-166314:-1:exon
so has part: feature:165749-165863:-1:exon
so has part: feature:165507-165632:-1:exon
so has part: feature:165327-165415:-1:exon
so has part: feature:159298-164822:-1:exon

position:174825:-1
position: 174825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:174745-174825:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:173282-173408:-1:exon

position:173408:-1
position: 173408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:172978-173084:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:167384-167555:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:166198-166314:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:165749-165863:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:165507-165632:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:165327-165415:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:159298-164822:-1:exon

RBMX
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: RBMX
product: RNA binding motif protein X-linked, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 49 ESTs, 3 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 135 samples with support for all annotated introns
transcript id: XM_030272365.3
SIO_010081: RBMX
subclass of: SO_0000673
so part of: RBMX
location: complement(join(159298..164822,165327..165430,165507..165632,165749..165863,166198..166314,167384..167555,172978..173084,173282..173408,174745..174825))
location: region:159298-174825:-1
so has part: feature:174745-174825:-1:exon
so has part: feature:173282-173408:-1:exon
so has part: feature:172978-173084:-1:exon
so has part: feature:167384-167555:-1:exon
so has part: feature:166198-166314:-1:exon
so has part: feature:165749-165863:-1:exon
so has part: feature:165507-165632:-1:exon
so has part: feature:165327-165430:-1:exon
so has part: feature:159298-164822:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:174745-174825:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:173282-173408:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:172978-173084:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:167384-167555:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:166198-166314:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:165749-165863:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:165507-165632:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:165327-165430:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:159298-164822:-1:exon

RBMX
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: RBMX
product: RNA binding motif protein X-linked, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 46 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 48 samples with support for all annotated introns
transcript id: XM_030272366.3
SIO_010081: RBMX
subclass of: SO_0000673
so part of: RBMX
location: complement(join(159298..164822,165327..165430,165507..165632,165749..165863,166198..166314,167384..167555,172978..173084,173282..173408,174551..174648))
location: region:159298-174648:-1
so has part: feature:174551-174648:-1:exon
so has part: feature:173282-173408:-1:exon
so has part: feature:172978-173084:-1:exon
so has part: feature:167384-167555:-1:exon
so has part: feature:166198-166314:-1:exon
so has part: feature:165749-165863:-1:exon
so has part: feature:165507-165632:-1:exon
so has part: feature:165327-165430:-1:exon
so has part: feature:159298-164822:-1:exon

position:174648:-1
position: 174648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:174551-174648:-1:exon

position:174551:-1
position: 174551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:173282-173408:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:172978-173084:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:167384-167555:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:166198-166314:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:165749-165863:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:165507-165632:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:165327-165430:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:159298-164822:-1:exon

RBMX
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: RBMX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding motif protein, X chromosome isoform X2
translation: MVEADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQATKPSFESGGRRGPPPPPRSRGPPRGLRGARGGSGARGPPSRGSHLGSSRGPLPMKRGPPPRSGGPPPKRSAPSGPVRSSSMGGRAPVSRGRDGYGGPPRREPMPSRRDVYMSPRDDGYSTKDGYSSRDYPSSRDTRDYAPPPRDYAYRDYGHSSSRDEYPSRGYSDRDGYGGGRDRDYSDHPSGGSYRDSYESYGNSRSAPPARGPPPSYGGSSRYDDYGSTRDGYGSRESYSSSRSDVYSSGRDRVGRQDRGLPPSMERGYPPPRDSYSSSSRGAPRGGGRGGSRSDRGGGRSRY
SIO_010081: RBMX
subclass of: SO_0000673
so part of: RBMX
location: complement(join(164515..164822,165327..165415,165507..165632,165749..165863,166198..166314,167384..167555,172978..173084,173282..173390))
location: region:164515-173390:-1
so has part: feature:173282-173390:-1:exon
so has part: feature:172978-173084:-1:exon
so has part: feature:167384-167555:-1:exon
so has part: feature:166198-166314:-1:exon
so has part: feature:165749-165863:-1:exon
so has part: feature:165507-165632:-1:exon
so has part: feature:165327-165415:-1:exon
so has part: feature:164515-164822:-1:exon

XP_030128227.1
type: Protein
SIO_000068: ncbiprotein

position:164515:-1
position: 164515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:173390:-1
position: 173390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:173282-173390:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:172978-173084:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:167384-167555:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:166198-166314:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:165749-165863:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:165507-165632:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:165327-165415:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:164515-164822:-1:exon

RBMX
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: RBMX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding motif protein, X chromosome isoform X2
translation: MVEADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQATKPSFESGGRRGPPPPPRSRGPPRGLRGARGGSGARGPPSRGSHLGSSRGPLPMKRGPPPRSGGPPPKRSAPSGPVRSSSMGGRAPVSRGRDGYGGPPRREPMPSRRDVYMSPRDDGYSTKDGYSSRDYPSSRDTRDYAPPPRDYAYRDYGHSSSRDEYPSRGYSDRDGYGGGRDRDYSDHPSGGSYRDSYESYGNSRSAPPARGPPPSYGGSSRYDDYGSTRDGYGSRESYSSSRSDVYSSGRDRVGRQDRGLPPSMERGYPPPRDSYSSSSRGAPRGGGRGGSRSDRGGGRSRY
SIO_010081: RBMX
subclass of: SO_0000673
so part of: RBMX
location: complement(join(164515..164822,165327..165415,165507..165632,165749..165863,166198..166314,167384..167555,172978..173084,173282..173390))
location: region:164515-173390:-1
so has part: feature:173282-173390:-1:exon
so has part: feature:172978-173084:-1:exon
so has part: feature:167384-167555:-1:exon
so has part: feature:166198-166314:-1:exon
so has part: feature:165749-165863:-1:exon
so has part: feature:165507-165632:-1:exon
so has part: feature:165327-165415:-1:exon
so has part: feature:164515-164822:-1:exon

XP_041572053.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:173282-173390:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:172978-173084:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:167384-167555:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:166198-166314:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:165749-165863:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:165507-165632:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:165327-165415:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:164515-164822:-1:exon

RBMX
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: RBMX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding motif protein, X chromosome isoform X1
translation: MVEADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQATKPSFESGGRRGPPPPPRSRGPPRGLRGARGGSGARGPPSRGSHLGSSRGPLPMKRGPPPRSGGPPPKRSAPSGPVRSSSMGGRAPVSRGRDGYGGPPRREPMPSRRDVYMSPRDDGYSTKDGYSSRDYPSSRDTRDYAPPPRDYAYRDYGHSSSRDEYPSRGYSLSSYSDRDGYGGGRDRDYSDHPSGGSYRDSYESYGNSRSAPPARGPPPSYGGSSRYDDYGSTRDGYGSRESYSSSRSDVYSSGRDRVGRQDRGLPPSMERGYPPPRDSYSSSSRGAPRGGGRGGSRSDRGGGRSRY
SIO_010081: RBMX
subclass of: SO_0000673
so part of: RBMX
location: complement(join(164515..164822,165327..165430,165507..165632,165749..165863,166198..166314,167384..167555,172978..173084,173282..173390))
location: region:164515-173390:-1
so has part: feature:173282-173390:-1:exon
so has part: feature:172978-173084:-1:exon
so has part: feature:167384-167555:-1:exon
so has part: feature:166198-166314:-1:exon
so has part: feature:165749-165863:-1:exon
so has part: feature:165507-165632:-1:exon
so has part: feature:165327-165430:-1:exon
so has part: feature:164515-164822:-1:exon

XP_030128224.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:173282-173390:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:172978-173084:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:167384-167555:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:166198-166314:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:165749-165863:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:165507-165632:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:165327-165430:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:164515-164822:-1:exon

RBMX
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: RBMX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding motif protein, X chromosome isoform X1
translation: MVEADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQATKPSFESGGRRGPPPPPRSRGPPRGLRGARGGSGARGPPSRGSHLGSSRGPLPMKRGPPPRSGGPPPKRSAPSGPVRSSSMGGRAPVSRGRDGYGGPPRREPMPSRRDVYMSPRDDGYSTKDGYSSRDYPSSRDTRDYAPPPRDYAYRDYGHSSSRDEYPSRGYSLSSYSDRDGYGGGRDRDYSDHPSGGSYRDSYESYGNSRSAPPARGPPPSYGGSSRYDDYGSTRDGYGSRESYSSSRSDVYSSGRDRVGRQDRGLPPSMERGYPPPRDSYSSSSRGAPRGGGRGGSRSDRGGGRSRY
SIO_010081: RBMX
subclass of: SO_0000673
so part of: RBMX
location: complement(join(164515..164822,165327..165430,165507..165632,165749..165863,166198..166314,167384..167555,172978..173084,173282..173390))
location: region:164515-173390:-1
so has part: feature:173282-173390:-1:exon
so has part: feature:172978-173084:-1:exon
so has part: feature:167384-167555:-1:exon
so has part: feature:166198-166314:-1:exon
so has part: feature:165749-165863:-1:exon
so has part: feature:165507-165632:-1:exon
so has part: feature:165327-165430:-1:exon
so has part: feature:164515-164822:-1:exon

XP_030128225.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:173282-173390:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:172978-173084:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:167384-167555:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:166198-166314:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:165749-165863:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:165507-165632:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:165327-165430:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:164515-164822:-1:exon

RBMX
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: RBMX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding motif protein, X chromosome isoform X1
translation: MVEADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQATKPSFESGGRRGPPPPPRSRGPPRGLRGARGGSGARGPPSRGSHLGSSRGPLPMKRGPPPRSGGPPPKRSAPSGPVRSSSMGGRAPVSRGRDGYGGPPRREPMPSRRDVYMSPRDDGYSTKDGYSSRDYPSSRDTRDYAPPPRDYAYRDYGHSSSRDEYPSRGYSLSSYSDRDGYGGGRDRDYSDHPSGGSYRDSYESYGNSRSAPPARGPPPSYGGSSRYDDYGSTRDGYGSRESYSSSRSDVYSSGRDRVGRQDRGLPPSMERGYPPPRDSYSSSSRGAPRGGGRGGSRSDRGGGRSRY
SIO_010081: RBMX
subclass of: SO_0000673
so part of: RBMX
location: complement(join(164515..164822,165327..165430,165507..165632,165749..165863,166198..166314,167384..167555,172978..173084,173282..173390))
location: region:164515-173390:-1
so has part: feature:173282-173390:-1:exon
so has part: feature:172978-173084:-1:exon
so has part: feature:167384-167555:-1:exon
so has part: feature:166198-166314:-1:exon
so has part: feature:165749-165863:-1:exon
so has part: feature:165507-165632:-1:exon
so has part: feature:165327-165430:-1:exon
so has part: feature:164515-164822:-1:exon

XP_030128226.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:173282-173390:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:172978-173084:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:167384-167555:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:166198-166314:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:165749-165863:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:165507-165632:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:165327-165430:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:164515-164822:-1:exon

LOC115495298
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC115495298
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(173158..173229)
location: region:173158-173229:-1
so has part: feature:173158-173229:-1:exon
subclass of: SO_0000578

115495298
type: Gene
SIO_000068: ncbigene

position:173158:-1
position: 173158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:173229:-1
position: 173229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:173158-173229:-1:exon

LOC115495298
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: snoRNA
gene: LOC115495298
product: small nucleolar RNA SNORD61
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00270
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003960495.1
SIO_010081: LOC115495298
subclass of: SO_0000673
so part of: LOC115495298
location: complement(173158..173229)
location: region:173158-173229:-1
so has part: feature:173158-173229:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:173158-173229:-1:exon

LOC116808415
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC116808415
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(176682..178411)
location: region:176682-178411:-1
so has part: feature:176682-178411:-1:exon
subclass of: SO_0000011

116808415
type: Gene
SIO_000068: ncbigene

position:176682:-1
position: 176682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:178411:-1
position: 178411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:176682-178411:-1:exon

LOC116808415
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC116808415
product: uncharacterized LOC116808415
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XR_004367857.2
SIO_010081: LOC116808415
subclass of: SO_0000673
so part of: LOC116808415
location: complement(join(176682..177000,177839..178411))
location: region:176682-178411:-1
so has part: feature:177839-178411:-1:exon
so has part: feature:176682-177000:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:177839-178411:-1:exon

position:177839:-1
position: 177839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:176682-177000:-1:exon

position:177000:-1
position: 177000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100225043
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC100225043
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 178552..203570
location: region:178552-203570:1
so has part: feature:178552-203570:1:exon
subclass of: SO_0000010

100225043
type: Gene
SIO_000068: ncbigene

position:178552:1
position: 178552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:203570:1
position: 203570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:178552-203570:1:exon

LOC100225043
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC100225043
product: transmembrane 9 superfamily member 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 15 ESTs, 5 long SRA reads, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 159 samples with support for all annotated introns
transcript id: XM_030272363.1
SIO_010081: LOC100225043
subclass of: SO_0000673
so part of: LOC100225043
location: join(178552..178773,179101..179168,180475..180568,182126..182253,182480..182609,183550..183677,184859..184970,187089..187168,188056..188164,191352..191484,192552..192671,192849..192906,195798..195957,196634..196785,197760..197871,198287..198458,202931..203570)
location: region:178552-203570:1
so has part: feature:178552-178773:1:exon
so has part: feature:179101-179168:1:exon
so has part: feature:180475-180568:1:exon
so has part: feature:182126-182253:1:exon
so has part: feature:182480-182609:1:exon
so has part: feature:183550-183677:1:exon
so has part: feature:184859-184970:1:exon
so has part: feature:187089-187168:1:exon
so has part: feature:188056-188164:1:exon
so has part: feature:191352-191484:1:exon
so has part: feature:192552-192671:1:exon
so has part: feature:192849-192906:1:exon
so has part: feature:195798-195957:1:exon
so has part: feature:196634-196785:1:exon
so has part: feature:197760-197871:1:exon
so has part: feature:198287-198458:1:exon
so has part: feature:202931-203570:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:178552-178773:1:exon

position:178773:1
position: 178773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:179101-179168:1:exon

position:179101:1
position: 179101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:179168:1
position: 179168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:180475-180568:1:exon

position:180475:1
position: 180475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:180568:1
position: 180568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:182126-182253:1:exon

position:182126:1
position: 182126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:182253:1
position: 182253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:182480-182609:1:exon

position:182480:1
position: 182480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:182609:1
position: 182609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:183550-183677:1:exon

position:183550:1
position: 183550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:183677:1
position: 183677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:184859-184970:1:exon

position:184859:1
position: 184859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:184970:1
position: 184970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:187089-187168:1:exon

position:187089:1
position: 187089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:187168:1
position: 187168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:188056-188164:1:exon

position:188056:1
position: 188056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:188164:1
position: 188164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:191352-191484:1:exon

position:191352:1
position: 191352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:191484:1
position: 191484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:192552-192671:1:exon

position:192552:1
position: 192552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:192671:1
position: 192671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:192849-192906:1:exon

position:192849:1
position: 192849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:192906:1
position: 192906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:195798-195957:1:exon

position:195798:1
position: 195798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:195957:1
position: 195957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:196634-196785:1:exon

position:196634:1
position: 196634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:196785:1
position: 196785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:197760-197871:1:exon

position:197760:1
position: 197760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:197871:1
position: 197871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:198287-198458:1:exon

position:198287:1
position: 198287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:198458:1
position: 198458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:202931-203570:1:exon

position:202931:1
position: 202931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100225043
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC100225043
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane 9 superfamily member 2
translation: MRLLVAALFLVAPLGAAFYLPGLAPVSFCEESEESESCKSLIELFVNRLDSVESVLPYEYDAFDFCQDKEEKRPSENLGQVLFGERIASSPYKFTFQKQETCKKVCTRSYDPGNSVDKSKLAFLKKGMQLNYQHHWIIDNMPVTWCYDVEDGQKYCNPGFPIGCFVTPDGRVKDACVINSEFNKKNTFYLFNHVDITIMYHSGKDENWPGARLVMARLRPQSYKHTDENNLSCEGPPMEIPGEFTNKLNLIYTYSVTFEEKNNIKWASRWDYILESMPHTNIQWFSIMNSLVIVLFLSGMVAMIILRTLHKDIARYNQIDSSEDAQEEFGWKLVHGDVFRPPRKGMLLSVFLGQGTQIFIMTFITLFLACLGFLSPANRGALMTCAVVLWVLLGTPAGYVSARMYKTFRGEKWKTNVLLTALLCPGIVFADFFIMNLILWVKGSSAAIPFGTLVAILAMWFGISVPLTFVGAYFGFKEKPIEHPVRTNQIPRQIPEQSFFTKPLPGIIMGGILPFGCIFIQLFFILNSIWSHQMYYMFGFLFLVFIILLITCSEATVLLCYFHLCAEDYHWWWRSFLTSSFTAVYLFIYAVHYFFSKLQITGTASTILYFGYTMIMVLIFFLFTGTIGFFACFWFVSKIYSVVKVD
SIO_010081: LOC100225043
subclass of: SO_0000673
so part of: LOC100225043
location: join(178657..178773,179101..179168,180475..180568,182126..182253,182480..182609,183550..183677,184859..184970,187089..187168,188056..188164,191352..191484,192552..192671,192849..192906,195798..195957,196634..196785,197760..197871,198287..198458,202931..202998)
location: region:178657-202998:1
so has part: feature:178657-178773:1:exon
so has part: feature:179101-179168:1:exon
so has part: feature:180475-180568:1:exon
so has part: feature:182126-182253:1:exon
so has part: feature:182480-182609:1:exon
so has part: feature:183550-183677:1:exon
so has part: feature:184859-184970:1:exon
so has part: feature:187089-187168:1:exon
so has part: feature:188056-188164:1:exon
so has part: feature:191352-191484:1:exon
so has part: feature:192552-192671:1:exon
so has part: feature:192849-192906:1:exon
so has part: feature:195798-195957:1:exon
so has part: feature:196634-196785:1:exon
so has part: feature:197760-197871:1:exon
so has part: feature:198287-198458:1:exon
so has part: feature:202931-202998:1:exon

XP_030128223.1
type: Protein
SIO_000068: ncbiprotein

position:178657:1
position: 178657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:202998:1
position: 202998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:178657-178773:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:179101-179168:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:180475-180568:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:182126-182253:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:182480-182609:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:183550-183677:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:184859-184970:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:187089-187168:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:188056-188164:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:191352-191484:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:192552-192671:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:192849-192906:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:195798-195957:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:196634-196785:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:197760-197871:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:198287-198458:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:202931-202998:1:exon

ZIC3
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: ZIC3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 309635..313060
location: region:309635-313060:1
so has part: feature:309635-313060:1:exon
subclass of: SO_0000010

100219292
type: Gene
SIO_000068: ncbigene

position:309635:1
position: 309635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:313060:1
position: 313060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:309635-313060:1:exon

ZIC3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: ZIC3
product: Zic family member 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_030272369.3
SIO_010081: ZIC3
subclass of: SO_0000673
so part of: ZIC3
location: join(309635..310710,311363..311526,312015..313060)
location: region:309635-313060:1
so has part: feature:309635-310710:1:exon
so has part: feature:311363-311526:1:exon
so has part: feature:312015-313060:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:309635-310710:1:exon

position:310710:1
position: 310710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:311363-311526:1:exon

position:311363:1
position: 311363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:311526:1
position: 311526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:312015-313060:1:exon

position:312015:1
position: 312015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ZIC3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: ZIC3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein ZIC 3
translation: MTMLLDGGPQFPALGVGGFAAPRHHEMPGRDAAGGGMGLGPFGDSSHAAAFKLNAAPHDLAAGQSSAFTPQAPGYASALGHHHHHHHHAGQVPSYGGAAAFNSTRDFLFRNRSSGIADAASGTAQHGLFGGSPGGLHGPGGIPDTPGYLLFPGLHEQSPSHTSPNGHVDNGQMHLGLRGDLFGRPDPYRAVSSPRTDPYAGAQFHNYNHMNMNMGMNVAAHHHHHHGPGAFFRYMRQPIKQELSCKWLDESQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHICYWDECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKPYICKVCDKSYTHPSSLRKHMKVHESQGSDSSPAASSGYESSTPPAVGSAGSKDSTKTPPAALQSNPGHNPGLPPNFNEWYV
SIO_010081: ZIC3
subclass of: SO_0000673
so part of: ZIC3
location: join(309675..310710,311363..311526,312015..312197)
location: region:309675-312197:1
so has part: feature:309675-310710:1:exon
so has part: feature:311363-311526:1:exon
so has part: feature:312015-312197:1:exon

XP_030128229.1
type: Protein
SIO_000068: ncbiprotein

position:309675:1
position: 309675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:312197:1
position: 312197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:309675-310710:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:311363-311526:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:312015-312197:1:exon

LOC121469967
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121469967
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 489042..494019
location: region:489042-494019:1
so has part: feature:489042-494019:1:exon
subclass of: SO_0000011

121469967
type: Gene
SIO_000068: ncbigene

position:489042:1
position: 489042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:494019:1
position: 494019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:489042-494019:1:exon

LOC121469967
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC121469967
product: uncharacterized LOC121469967
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XR_005980352.1
SIO_010081: LOC121469967
subclass of: SO_0000673
so part of: LOC121469967
location: join(489042..489179,493745..494019)
location: region:489042-494019:1
so has part: feature:489042-489179:1:exon
so has part: feature:493745-494019:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:489042-489179:1:exon

position:489179:1
position: 489179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:493745-494019:1:exon

position:493745:1
position: 493745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FGF13
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: FGF13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(500805..661081)
location: region:500805-661081:-1
so has part: feature:500805-661081:-1:exon
subclass of: SO_0000010

100223078
type: Gene
SIO_000068: ncbigene

position:500805:-1
position: 500805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:661081:-1
position: 661081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:500805-661081:-1:exon

FGF13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: FGF13
product: fibroblast growth factor 13, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, 4 long SRA reads, 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 95 samples with support for all annotated introns
transcript id: XM_030272371.3
SIO_010081: FGF13
subclass of: SO_0000673
so part of: FGF13
location: complement(join(500805..502185,502619..502817,535257..535360,539105..539215,574784..574951,660368..660793))
location: region:500805-660793:-1
so has part: feature:660368-660793:-1:exon
so has part: feature:574784-574951:-1:exon
so has part: feature:539105-539215:-1:exon
so has part: feature:535257-535360:-1:exon
so has part: feature:502619-502817:-1:exon
so has part: feature:500805-502185:-1:exon

position:660793:-1
position: 660793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:660368-660793:-1:exon

position:660368:-1
position: 660368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:574784-574951:-1:exon

position:574784:-1
position: 574784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:574951:-1
position: 574951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:539105-539215:-1:exon

position:539105:-1
position: 539105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:539215:-1
position: 539215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:535257-535360:-1:exon

position:535257:-1
position: 535257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:535360:-1
position: 535360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:502619-502817:-1:exon

position:502619:-1
position: 502619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:502817:-1
position: 502817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:500805-502185:-1:exon

position:502185:-1
position: 502185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FGF13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: FGF13
product: fibroblast growth factor 13, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 10 ESTs, 1 long SRA read, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 58 samples with support for all annotated introns
transcript id: XM_030272372.3
SIO_010081: FGF13
subclass of: SO_0000673
so part of: FGF13
location: complement(join(500805..502185,502619..502817,535257..535360,539105..539215,660368..660789))
location: region:500805-660789:-1
so has part: feature:660368-660789:-1:exon
so has part: feature:539105-539215:-1:exon
so has part: feature:535257-535360:-1:exon
so has part: feature:502619-502817:-1:exon
so has part: feature:500805-502185:-1:exon

position:660789:-1
position: 660789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:660368-660789:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:539105-539215:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:535257-535360:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:502619-502817:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:500805-502185:-1:exon

FGF13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: FGF13
product: fibroblast growth factor 13, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 10 ESTs, 1 long SRA read, 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_030272374.3
SIO_010081: FGF13
subclass of: SO_0000673
so part of: FGF13
location: complement(join(500805..502185,502619..502817,535257..535360,539105..539215,574784..574951,587522..587544))
location: region:500805-587544:-1
so has part: feature:587522-587544:-1:exon
so has part: feature:574784-574951:-1:exon
so has part: feature:539105-539215:-1:exon
so has part: feature:535257-535360:-1:exon
so has part: feature:502619-502817:-1:exon
so has part: feature:500805-502185:-1:exon

position:587544:-1
position: 587544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:587522-587544:-1:exon

position:587522:-1
position: 587522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:574784-574951:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:539105-539215:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:535257-535360:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:502619-502817:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:500805-502185:-1:exon

FGF13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: FGF13
product: fibroblast growth factor 13, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 11 ESTs, 1 long SRA read, 31 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 131 samples with support for all annotated introns
transcript id: XM_002190368.5
SIO_010081: FGF13
subclass of: SO_0000673
so part of: FGF13
location: complement(join(500805..502185,502619..502817,535257..535360,539105..539215,541133..541796))
location: region:500805-541796:-1
so has part: feature:541133-541796:-1:exon
so has part: feature:539105-539215:-1:exon
so has part: feature:535257-535360:-1:exon
so has part: feature:502619-502817:-1:exon
so has part: feature:500805-502185:-1:exon

position:541796:-1
position: 541796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:541133-541796:-1:exon

position:541133:-1
position: 541133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:539105-539215:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:535257-535360:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:502619-502817:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:500805-502185:-1:exon

FGF13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: FGF13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibroblast growth factor 13 isoform X2
translation: MSGKVIKPKEEKDASKEPQLKGIVTKLYSRQGYHLQLQADGTIDGTKEEDSSYTLFNLIPVGLRVVAIQGVQTKLYLAMNSEGYLYTSEHFTPECKFKESVFENYYVTYSSMIYRQQQSGRGWYLGLNKEGEIMKGNHVKKNKPAAHFLPKPLKVAMYKEPSLHDLTEFSRSGSGTPTKSRSVSGVLNGGKSMSQNEST
SIO_010081: FGF13
subclass of: SO_0000673
so part of: FGF13
location: complement(join(502049..502185,502619..502817,535257..535360,539105..539215,660368..660416))
location: region:502049-660416:-1
so has part: feature:660368-660416:-1:exon
so has part: feature:539105-539215:-1:exon
so has part: feature:535257-535360:-1:exon
so has part: feature:502619-502817:-1:exon
so has part: feature:502049-502185:-1:exon

XP_030128232.1
type: Protein
SIO_000068: ncbiprotein

position:502049:-1
position: 502049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:660416:-1
position: 660416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:660368-660416:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:539105-539215:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:535257-535360:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:502619-502817:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:502049-502185:-1:exon

FGF13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: FGF13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibroblast growth factor 13 isoform X1
translation: MSGKVIKPKEEKDASKVMDDAPPGTQEYIMLRQDSIQSAELKKKESPFRAKCHEIFCCPLKQVHLKENTEPEEPQLKGIVTKLYSRQGYHLQLQADGTIDGTKEEDSSYTLFNLIPVGLRVVAIQGVQTKLYLAMNSEGYLYTSEHFTPECKFKESVFENYYVTYSSMIYRQQQSGRGWYLGLNKEGEIMKGNHVKKNKPAAHFLPKPLKVAMYKEPSLHDLTEFSRSGSGTPTKSRSVSGVLNGGKSMSQNEST
SIO_010081: FGF13
subclass of: SO_0000673
so part of: FGF13
location: complement(join(502049..502185,502619..502817,535257..535360,539105..539215,574784..574951,660368..660416))
location: region:502049-660416:-1
so has part: feature:660368-660416:-1:exon
so has part: feature:574784-574951:-1:exon
so has part: feature:539105-539215:-1:exon
so has part: feature:535257-535360:-1:exon
so has part: feature:502619-502817:-1:exon
so has part: feature:502049-502185:-1:exon

XP_030128231.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:660368-660416:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:574784-574951:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:539105-539215:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:535257-535360:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:502619-502817:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:502049-502185:-1:exon

FGF13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: FGF13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibroblast growth factor 13 isoform X5
translation: MDDAPPGTQEYIMLRQDSIQSAELKKKESPFRAKCHEIFCCPLKQVHLKENTEPEEPQLKGIVTKLYSRQGYHLQLQADGTIDGTKEEDSSYTLFNLIPVGLRVVAIQGVQTKLYLAMNSEGYLYTSEHFTPECKFKESVFENYYVTYSSMIYRQQQSGRGWYLGLNKEGEIMKGNHVKKNKPAAHFLPKPLKVAMYKEPSLHDLTEFSRSGSGTPTKSRSVSGVLNGGKSMSQNEST
SIO_010081: FGF13
subclass of: SO_0000673
so part of: FGF13
location: complement(join(502049..502185,502619..502817,535257..535360,539105..539215,574784..574949))
location: region:502049-574949:-1
so has part: feature:574784-574949:-1:exon
so has part: feature:539105-539215:-1:exon
so has part: feature:535257-535360:-1:exon
so has part: feature:502619-502817:-1:exon
so has part: feature:502049-502185:-1:exon

XP_030128234.3
type: Protein
SIO_000068: ncbiprotein

position:574949:-1
position: 574949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:574784-574949:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:539105-539215:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:535257-535360:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:502619-502817:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:502049-502185:-1:exon

FGF13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: FGF13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibroblast growth factor 13 isoform X4
translation: MAAAIASSLIRQKRQAREREKSNACKCVNSPSKSKGSCDKNKLNVFSRVKLFGSKKRRRRRPEPQLKGIVTKLYSRQGYHLQLQADGTIDGTKEEDSSYTLFNLIPVGLRVVAIQGVQTKLYLAMNSEGYLYTSEHFTPECKFKESVFENYYVTYSSMIYRQQQSGRGWYLGLNKEGEIMKGNHVKKNKPAAHFLPKPLKVAMYKEPSLHDLTEFSRSGSGTPTKSRSVSGVLNGGKSMSQNEST
SIO_010081: FGF13
subclass of: SO_0000673
so part of: FGF13
location: complement(join(502049..502185,502619..502817,535257..535360,539105..539215,541133..541319))
location: region:502049-541319:-1
so has part: feature:541133-541319:-1:exon
so has part: feature:539105-539215:-1:exon
so has part: feature:535257-535360:-1:exon
so has part: feature:502619-502817:-1:exon
so has part: feature:502049-502185:-1:exon

XP_002190404.1
type: Protein
SIO_000068: ncbiprotein

position:541319:-1
position: 541319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:541133-541319:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:539105-539215:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:535257-535360:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:502619-502817:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:502049-502185:-1:exon

LOC121469968
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121469968
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 502814..514718
location: region:502814-514718:1
so has part: feature:502814-514718:1:exon
subclass of: SO_0000011

121469968
type: Gene
SIO_000068: ncbigene

position:502814:1
position: 502814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:514718:1
position: 514718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:502814-514718:1:exon

LOC121469968
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC121469968
product: uncharacterized LOC121469968
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XR_005980353.1
SIO_010081: LOC121469968
subclass of: SO_0000673
so part of: LOC121469968
location: join(502814..507874,512129..514718)
location: region:502814-514718:1
so has part: feature:502814-507874:1:exon
so has part: feature:512129-514718:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:502814-507874:1:exon

position:507874:1
position: 507874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:512129-514718:1:exon

position:512129:1
position: 512129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FGF13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: FGF13
product: fibroblast growth factor 13, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_041716120.1
SIO_010081: FGF13
subclass of: SO_0000673
so part of: FGF13
location: complement(join(574279..574567,574784..574951,660368..661081))
location: region:574279-661081:-1
so has part: feature:660368-661081:-1:exon
so has part: feature:574784-574951:-1:exon
so has part: feature:574279-574567:-1:exon

position:574279:-1
position: 574279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:660368-661081:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:574784-574951:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:574279-574567:-1:exon

position:574567:-1
position: 574567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FGF13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: FGF13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibroblast growth factor 13 isoform X3
translation: MRKETSPNPTQPSEQPPRVTVPPSPRSVGLAGPAALPWPWGGEAESGRRGKEGAGAGQTQGVSLLSPARRAAQGLGAAAAGAPRAPLRSPLRSPLRSRTAGLRGSAPGSGQLAGSSSPPLPPLLLVFLLIFLPCRRTGSPTRTHAAPRPSLLWVQPEFAPLPGIFPPKLGSMSGKVIKPKEEKDASKVMDDAPPGTQEYIMLRQDSIQSAELKKKESPFRAKCHEIFCCPLKQVHLKENTEPEALTITHCPSLAAKAACCSEGTTGRRFLQEFRAALCPRSGWQARARLVPAPHLHQASASR
SIO_010081: FGF13
subclass of: SO_0000673
so part of: FGF13
location: complement(join(574389..574567,574784..574951,660368..660929))
location: region:574389-660929:-1
so has part: feature:660368-660929:-1:exon
so has part: feature:574784-574951:-1:exon
so has part: feature:574389-574567:-1:exon

XP_041572054.1
type: Protein
SIO_000068: ncbiprotein

position:574389:-1
position: 574389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:660929:-1
position: 660929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:660368-660929:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:574784-574951:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:574389-574567:-1:exon

F9
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: F9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 695760..705666
location: region:695760-705666:1
so has part: feature:695760-705666:1:exon
subclass of: SO_0000010

100225886
type: Gene
SIO_000068: ncbigene

position:695760:1
position: 695760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:705666:1
position: 705666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:695760-705666:1:exon

F9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: F9
product: coagulation factor IX
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_030272375.3
SIO_010081: F9
subclass of: SO_0000673
so part of: F9
location: join(695760..695882,696996..697159,697442..697466,699594..699707,701284..701412,703553..703785,704235..704358,704912..705666)
location: region:695760-705666:1
so has part: feature:695760-695882:1:exon
so has part: feature:696996-697159:1:exon
so has part: feature:697442-697466:1:exon
so has part: feature:699594-699707:1:exon
so has part: feature:701284-701412:1:exon
so has part: feature:703553-703785:1:exon
so has part: feature:704235-704358:1:exon
so has part: feature:704912-705666:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:695760-695882:1:exon

position:695882:1
position: 695882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:696996-697159:1:exon

position:696996:1
position: 696996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:697159:1
position: 697159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:697442-697466:1:exon

position:697442:1
position: 697442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:697466:1
position: 697466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:699594-699707:1:exon

position:699594:1
position: 699594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:699707:1
position: 699707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:701284-701412:1:exon

position:701284:1
position: 701284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:701412:1
position: 701412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:703553-703785:1:exon

position:703553:1
position: 703553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:703785:1
position: 703785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:704235-704358:1:exon

position:704235:1
position: 704235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:704358:1
position: 704358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:704912-705666:1:exon

position:704912:1
position: 704912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

F9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: F9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coagulation factor IX
translation: MANVPLVLSMCLLGACLAAGNTVFIGSKEASSVLQRQRRANSNRLEEVIPGNLERECIEEKCSYEEAREVFENEEKTMQFWQTYVDGDQCNPNPCKNGAVCKDEINSYVCWCPAGYEGKNCEIDFTCAIKNGGCKHFCSHQPPQKVVCSCAAGYKLHEDGKSCEPTVPFPCGRITAPEAKRKLTRSMNTFEHWNITGDDPDDGPGEDNATDSSTPAPSRIAPVLRTGTRVVGGSDSMKGEVPWQVLLVNSEGFGFCGASIINEKWLVTAAHCLKPGYSHNITAVAGEHDTRSHEHTEQLRRVVRLLPHPTYNASINEYHNDIALLELEQPLTFNSYVTPICLGSREFTNALLKQGVGTVSGWGKVLFRGRQATTLQVLKVPFVDRPTCLKSTSTSILQNMFCAGFPSGGRDTCEGDSGGPHTSEIEGTWFLTGITSWGEECALPGKYGIYTRVSKYLKWIKQTTRLP
SIO_010081: F9
subclass of: SO_0000673
so part of: F9
location: join(695816..695882,696996..697159,697442..697466,699594..699707,701284..701412,703553..703785,704235..704358,704912..705459)
location: region:695816-705459:1
so has part: feature:695816-695882:1:exon
so has part: feature:696996-697159:1:exon
so has part: feature:697442-697466:1:exon
so has part: feature:699594-699707:1:exon
so has part: feature:701284-701412:1:exon
so has part: feature:703553-703785:1:exon
so has part: feature:704235-704358:1:exon
so has part: feature:704912-705459:1:exon

XP_030128235.3
type: Protein
SIO_000068: ncbiprotein

position:695816:1
position: 695816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:705459:1
position: 705459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:695816-695882:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:696996-697159:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:697442-697466:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:699594-699707:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:701284-701412:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:703553-703785:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:704235-704358:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:704912-705459:1:exon

MCF2
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: MCF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(706392..753983)
location: region:706392-753983:-1
so has part: feature:706392-753983:-1:exon
subclass of: SO_0000010

100220204
type: Gene
SIO_000068: ncbigene

position:706392:-1
position: 706392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:753983:-1
position: 753983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:706392-753983:-1:exon

MCF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: MCF2
product: MCF.2 cell line derived transforming sequence, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 ESTs, 1 long SRA read, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 63 samples with support for all annotated introns
transcript id: XM_032748331.2
SIO_010081: MCF2
subclass of: SO_0000673
so part of: MCF2
location: complement(join(706392..708197,711316..711416,712695..712807,713012..713121,713200..713306,713791..713857,714764..714842,715130..715222,717583..717804,718540..718665,719612..719704,720845..720937,721251..721320,721424..721539,723534..723600,723818..723906,724476..724564,727075..727246,727364..727555,728861..729052,730127..730246,730607..730721,731161..731285,732146..732295,732950..733066,734631..734750,740932..741022,745454..745568,746126..746194,753877..753983))
location: region:706392-753983:-1
so has part: feature:753877-753983:-1:exon
so has part: feature:746126-746194:-1:exon
so has part: feature:745454-745568:-1:exon
so has part: feature:740932-741022:-1:exon
so has part: feature:734631-734750:-1:exon
so has part: feature:732950-733066:-1:exon
so has part: feature:732146-732295:-1:exon
so has part: feature:731161-731285:-1:exon
so has part: feature:730607-730721:-1:exon
so has part: feature:730127-730246:-1:exon
so has part: feature:728861-729052:-1:exon
so has part: feature:727364-727555:-1:exon
so has part: feature:727075-727246:-1:exon
so has part: feature:724476-724564:-1:exon
so has part: feature:723818-723906:-1:exon
so has part: feature:723534-723600:-1:exon
so has part: feature:721424-721539:-1:exon
so has part: feature:721251-721320:-1:exon
so has part: feature:720845-720937:-1:exon
so has part: feature:719612-719704:-1:exon
so has part: feature:718540-718665:-1:exon
so has part: feature:717583-717804:-1:exon
so has part: feature:715130-715222:-1:exon
so has part: feature:714764-714842:-1:exon
so has part: feature:713791-713857:-1:exon
so has part: feature:713200-713306:-1:exon
so has part: feature:713012-713121:-1:exon
so has part: feature:712695-712807:-1:exon
so has part: feature:711316-711416:-1:exon
so has part: feature:706392-708197:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:753877-753983:-1:exon

position:753877:-1
position: 753877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:746126-746194:-1:exon

position:746126:-1
position: 746126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:746194:-1
position: 746194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:745454-745568:-1:exon

position:745454:-1
position: 745454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:745568:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 4
SIO_000628: feature:740932-741022:-1:exon

position:740932:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:741022:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 5
SIO_000628: feature:734631-734750:-1:exon

position:734631:-1
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reference: sequence
type: ReverseStrandPosition
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position:734750:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 6
SIO_000628: feature:732950-733066:-1:exon

position:732950:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:733066:-1
position: 733066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:732146-732295:-1:exon

position:732146:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:732295:-1
position: 732295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:731161-731285:-1:exon

position:731161:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:731285:-1
position: 731285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:730607-730721:-1:exon

position:730607:-1
position: 730607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:730721:-1
position: 730721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:730127-730246:-1:exon

position:730127:-1
position: 730127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:730246:-1
position: 730246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:728861-729052:-1:exon

position:728861:-1
position: 728861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:729052:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:727364-727555:-1:exon

position:727364:-1
position: 727364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:727555:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 13
SIO_000628: feature:727075-727246:-1:exon

position:727075:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:727246:-1
position: 727246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:724476-724564:-1:exon

position:724476:-1
position: 724476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:724564:-1
position: 724564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:723818-723906:-1:exon

position:723818:-1
position: 723818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:723906:-1
position: 723906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:723534-723600:-1:exon

position:723534:-1
position: 723534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:723600:-1
position: 723600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:721424-721539:-1:exon

position:721424:-1
position: 721424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:721539:-1
position: 721539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:721251-721320:-1:exon

position:721251:-1
position: 721251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:721320:-1
position: 721320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:720845-720937:-1:exon

position:720845:-1
position: 720845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:720937:-1
position: 720937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:719612-719704:-1:exon

position:719612:-1
position: 719612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:719704:-1
position: 719704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:718540-718665:-1:exon

position:718540:-1
position: 718540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:718665:-1
position: 718665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:717583-717804:-1:exon

position:717583:-1
position: 717583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:717804:-1
position: 717804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:715130-715222:-1:exon

position:715130:-1
position: 715130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:715222:-1
position: 715222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:714764-714842:-1:exon

position:714764:-1
position: 714764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:714842:-1
position: 714842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:713791-713857:-1:exon

position:713791:-1
position: 713791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:713857:-1
position: 713857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:713200-713306:-1:exon

position:713200:-1
position: 713200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:713306:-1
position: 713306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:713012-713121:-1:exon

position:713012:-1
position: 713012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:713121:-1
position: 713121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:712695-712807:-1:exon

position:712695:-1
position: 712695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:712807:-1
position: 712807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:711316-711416:-1:exon

position:711316:-1
position: 711316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:711416:-1
position: 711416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:706392-708197:-1:exon

position:708197:-1
position: 708197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MCF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: MCF2
product: MCF.2 cell line derived transforming sequence, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 63 samples with support for all annotated introns
transcript id: XM_032748330.2
SIO_010081: MCF2
subclass of: SO_0000673
so part of: MCF2
location: complement(join(706392..708197,711316..711416,712695..712807,713012..713121,713200..713306,713791..713860,714764..714842,715130..715222,717583..717804,718540..718665,719612..719704,720845..720937,721251..721320,721424..721539,723534..723600,723818..723906,724476..724564,727075..727246,727364..727555,728861..729052,730127..730246,730607..730721,731161..731285,732146..732295,732950..733066,734631..734750,740932..741022,745454..745568,746126..746194,753877..753983))
location: region:706392-753983:-1
so has part: feature:753877-753983:-1:exon
so has part: feature:746126-746194:-1:exon
so has part: feature:745454-745568:-1:exon
so has part: feature:740932-741022:-1:exon
so has part: feature:734631-734750:-1:exon
so has part: feature:732950-733066:-1:exon
so has part: feature:732146-732295:-1:exon
so has part: feature:731161-731285:-1:exon
so has part: feature:730607-730721:-1:exon
so has part: feature:730127-730246:-1:exon
so has part: feature:728861-729052:-1:exon
so has part: feature:727364-727555:-1:exon
so has part: feature:727075-727246:-1:exon
so has part: feature:724476-724564:-1:exon
so has part: feature:723818-723906:-1:exon
so has part: feature:723534-723600:-1:exon
so has part: feature:721424-721539:-1:exon
so has part: feature:721251-721320:-1:exon
so has part: feature:720845-720937:-1:exon
so has part: feature:719612-719704:-1:exon
so has part: feature:718540-718665:-1:exon
so has part: feature:717583-717804:-1:exon
so has part: feature:715130-715222:-1:exon
so has part: feature:714764-714842:-1:exon
so has part: feature:713791-713860:-1:exon
so has part: feature:713200-713306:-1:exon
so has part: feature:713012-713121:-1:exon
so has part: feature:712695-712807:-1:exon
so has part: feature:711316-711416:-1:exon
so has part: feature:706392-708197:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:753877-753983:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:746126-746194:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:745454-745568:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:740932-741022:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:734631-734750:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:732950-733066:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:732146-732295:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:731161-731285:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:730607-730721:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:730127-730246:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:728861-729052:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:727364-727555:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:727075-727246:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:724476-724564:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:723818-723906:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:723534-723600:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:721424-721539:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:721251-721320:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:720845-720937:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:719612-719704:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:718540-718665:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:717583-717804:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:715130-715222:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:714764-714842:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:713791-713860:-1:exon

position:713860:-1
position: 713860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:713200-713306:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:713012-713121:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:712695-712807:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:711316-711416:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:706392-708197:-1:exon

MCF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: MCF2
product: MCF.2 cell line derived transforming sequence, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 ESTs, 2 long SRA reads, 2 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 71 samples with support for all annotated introns
transcript id: XM_041716121.1
SIO_010081: MCF2
subclass of: SO_0000673
so part of: MCF2
location: complement(join(706392..708197,711316..711416,712695..712807,713012..713121,713200..713306,713791..713857,714764..714842,715130..715222,717583..717804,718540..718665,719612..719704,720845..720937,721251..721320,721424..721539,723534..723600,723818..723906,724476..724564,727075..727246,727364..727555,728861..729052,730127..730246,730607..730721,731161..731285,732146..732295,732950..733066,734631..734750,738428..739006))
location: region:706392-739006:-1
so has part: feature:738428-739006:-1:exon
so has part: feature:734631-734750:-1:exon
so has part: feature:732950-733066:-1:exon
so has part: feature:732146-732295:-1:exon
so has part: feature:731161-731285:-1:exon
so has part: feature:730607-730721:-1:exon
so has part: feature:730127-730246:-1:exon
so has part: feature:728861-729052:-1:exon
so has part: feature:727364-727555:-1:exon
so has part: feature:727075-727246:-1:exon
so has part: feature:724476-724564:-1:exon
so has part: feature:723818-723906:-1:exon
so has part: feature:723534-723600:-1:exon
so has part: feature:721424-721539:-1:exon
so has part: feature:721251-721320:-1:exon
so has part: feature:720845-720937:-1:exon
so has part: feature:719612-719704:-1:exon
so has part: feature:718540-718665:-1:exon
so has part: feature:717583-717804:-1:exon
so has part: feature:715130-715222:-1:exon
so has part: feature:714764-714842:-1:exon
so has part: feature:713791-713857:-1:exon
so has part: feature:713200-713306:-1:exon
so has part: feature:713012-713121:-1:exon
so has part: feature:712695-712807:-1:exon
so has part: feature:711316-711416:-1:exon
so has part: feature:706392-708197:-1:exon

position:739006:-1
position: 739006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:738428-739006:-1:exon

position:738428:-1
position: 738428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:734631-734750:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:732950-733066:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:732146-732295:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:731161-731285:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:730607-730721:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:730127-730246:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:728861-729052:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:727364-727555:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:727075-727246:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:724476-724564:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:723818-723906:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:723534-723600:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:721424-721539:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:721251-721320:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:720845-720937:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:719612-719704:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:718540-718665:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:717583-717804:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:715130-715222:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:714764-714842:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:713791-713857:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:713200-713306:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:713012-713121:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:712695-712807:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:711316-711416:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:706392-708197:-1:exon

MCF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: MCF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proto-oncogene DBL isoform X2
translation: MERYYRLLRAAALLEAAAETATPICAKDISDDLMKEFAFLSGGRGKDKAWIITLPDNAGFNQVPEESVSKVLTYLTAVPSQHESDTKFILILDRRLDTWTSVKMTLQKIAASFPGNLHLVMVLRPTGFFQRTFTDIGFRFSQEDFLLKLPVVMLSSVSDLLTYIDEQQLTPELGGTLEYCHSEWVIFRTAIESFALTVKEIAQLLQSFGTELAEAELPEDMLSIQRILALRTERYRQLKEDITAVTKEGNLLLSSFEEPDSGECSQDQQQERPGDWETVNRLLGQLREMETAFDGFWEKHQLKMEQYLQLWKFEQSFQEVKNAIEFLMGQQAELPDTGDSIPQVKQRLKDLDHFDGMAQELVGKAQLVILHGHQLAANHHYALNLICQQCNELRHHSDLLAEDIKRKQMRLQKTLDLHTRLQQALQCCDEGAYLLANQQMDKCQSKEGAQKALQDIERFLESSSSYLNCDPQALQYDFEAVLTPELKCQIQSLQVKLENVRSMFENRQCCFRRLLDKHVRPVQLVAPRPENPPRAKSPLFSPKHGVDFNSSLKFSFDLSLPGKKTSRKTPSSRKIEVMHDYQEKRNSLQYFISDSDDSLDILKGHVINELIETERVYVEELFTVLTGYRAEMDNPAMLILLPPVLRNRKDVLFGNMPEIYDFHNKIFLHSLENCLGAPERVGCCFLDRREDFQMYEKYCQNKPRSESLWRQCSESSFFQECQRKLEHKLGLDSYLLKPVQRLTKYQLLLKELLKYSTSCDGVQELQEALVAMLDLLKSVNDSMHQISITGYDGDLSELGKVLMQGSFSVWAGHRKGPTKMKELARFKPMQRHLFLYEKALVFCKKREEHGDGYDKTSSYSFKHFLKMNAVGITENVKGDHRKFEIWYSGREEVYVVQAQTVDLKMAWLNEIRKILFKQQELIKAGEKQQPGSCSEQLPLSSQPGDRKQQRASISSEENDSERSSPVLQDCGLLSPQRQPHRGWPGGSQSLEICEGLEEWSGQQYLSTCSDTEEEENQLSPGKYKALADCKRRGSEDLLVKNGDEIQLLHEDGEGQWLVKNLNRRKEGWIPVHSLQIVVGDCRFRNAKVADAALCNTRKFSSP
SIO_010081: MCF2
subclass of: SO_0000673
so part of: MCF2
location: complement(join(708157..708197,711316..711416,712695..712807,713012..713121,713200..713306,713791..713857,714764..714842,715130..715222,717583..717804,718540..718665,719612..719704,720845..720937,721251..721320,721424..721539,723534..723600,723818..723906,724476..724564,727075..727246,727364..727555,728861..729052,730127..730246,730607..730721,731161..731285,732146..732295,732950..733066,734631..734750,740932..741022,745454..745568,746126..746194,753877..753931))
location: region:708157-753931:-1
so has part: feature:753877-753931:-1:exon
so has part: feature:746126-746194:-1:exon
so has part: feature:745454-745568:-1:exon
so has part: feature:740932-741022:-1:exon
so has part: feature:734631-734750:-1:exon
so has part: feature:732950-733066:-1:exon
so has part: feature:732146-732295:-1:exon
so has part: feature:731161-731285:-1:exon
so has part: feature:730607-730721:-1:exon
so has part: feature:730127-730246:-1:exon
so has part: feature:728861-729052:-1:exon
so has part: feature:727364-727555:-1:exon
so has part: feature:727075-727246:-1:exon
so has part: feature:724476-724564:-1:exon
so has part: feature:723818-723906:-1:exon
so has part: feature:723534-723600:-1:exon
so has part: feature:721424-721539:-1:exon
so has part: feature:721251-721320:-1:exon
so has part: feature:720845-720937:-1:exon
so has part: feature:719612-719704:-1:exon
so has part: feature:718540-718665:-1:exon
so has part: feature:717583-717804:-1:exon
so has part: feature:715130-715222:-1:exon
so has part: feature:714764-714842:-1:exon
so has part: feature:713791-713857:-1:exon
so has part: feature:713200-713306:-1:exon
so has part: feature:713012-713121:-1:exon
so has part: feature:712695-712807:-1:exon
so has part: feature:711316-711416:-1:exon
so has part: feature:708157-708197:-1:exon

XP_032604222.2
type: Protein
SIO_000068: ncbiprotein

position:708157:-1
position: 708157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:753931:-1
position: 753931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:753877-753931:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:746126-746194:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:745454-745568:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:740932-741022:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:734631-734750:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:732950-733066:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:732146-732295:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:731161-731285:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:730607-730721:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:730127-730246:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:728861-729052:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:727364-727555:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:727075-727246:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:724476-724564:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:723818-723906:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:723534-723600:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:721424-721539:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:721251-721320:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:720845-720937:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:719612-719704:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:718540-718665:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:717583-717804:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:715130-715222:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:714764-714842:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:713791-713857:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:713200-713306:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:713012-713121:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:712695-712807:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:711316-711416:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:708157-708197:-1:exon

MCF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: MCF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proto-oncogene DBL isoform X1
translation: MERYYRLLRAAALLEAAAETATPICAKDISDDLMKEFAFLSGGRGKDKAWIITLPDNAGFNQVPEESVSKVLTYLTAVPSQHESDTKFILILDRRLDTWTSVKMTLQKIAASFPGNLHLVMVLRPTGFFQRTFTDIGFRFSQEDFLLKLPVVMLSSVSDLLTYIDEQQLTPELGGTLEYCHSEWVIFRTAIESFALTVKEIAQLLQSFGTELAEAELPEDMLSIQRILALRTERYRQLKEDITAVTKEGNLLLSSFEEPDSGECSQDQQQERPGDWETVNRLLGQLREMETAFDGFWEKHQLKMEQYLQLWKFEQSFQEVKNAIEFLMGQQAELPDTGDSIPQVKQRLKDLDHFDGMAQELVGKAQLVILHGHQLAANHHYALNLICQQCNELRHHSDLLAEDIKRKQMRLQKTLDLHTRLQQALQCCDEGAYLLANQQMDKCQSKEGAQKALQDIERFLESSSSYLNCDPQALQYDFEAVLTPELKCQIQSLQVKLENVRSMFENRQCCFRRLLDKHVRPVQLVAPRPENPPRAKSPLFSPKHGVDFNSSLKFSFDLSLPGKKTSRKTPSSRKIEVMHDYQEKRNSLQYFISDSDDSLDILKGHVINELIETERVYVEELFTVLTGYRAEMDNPAMLILLPPVLRNRKDVLFGNMPEIYDFHNKIFLHSLENCLGAPERVGCCFLDRREDFQMYEKYCQNKPRSESLWRQCSESSFFQECQRKLEHKLGLDSYLLKPVQRLTKYQLLLKELLKYSTSCDGVQELQEALVAMLDLLKSVNDSMHQISITGYDGDLSELGKVLMQGSFSVWAGHRKGPTKMKELARFKPMQRHLFLYEKALVFCKKREEHGDGYDKTSSYSFKHFLKMNAVGITENVKGDHRKFEIWYSGREEVYVVQAQTVDLKMAWLNEIRKILFKQQELIKAAGEKQQPGSCSEQLPLSSQPGDRKQQRASISSEENDSERSSPVLQDCGLLSPQRQPHRGWPGGSQSLEICEGLEEWSGQQYLSTCSDTEEEENQLSPGKYKALADCKRRGSEDLLVKNGDEIQLLHEDGEGQWLVKNLNRRKEGWIPVHSLQIVVGDCRFRNAKVADAALCNTRKFSSP
SIO_010081: MCF2
subclass of: SO_0000673
so part of: MCF2
location: complement(join(708157..708197,711316..711416,712695..712807,713012..713121,713200..713306,713791..713860,714764..714842,715130..715222,717583..717804,718540..718665,719612..719704,720845..720937,721251..721320,721424..721539,723534..723600,723818..723906,724476..724564,727075..727246,727364..727555,728861..729052,730127..730246,730607..730721,731161..731285,732146..732295,732950..733066,734631..734750,740932..741022,745454..745568,746126..746194,753877..753931))
location: region:708157-753931:-1
so has part: feature:753877-753931:-1:exon
so has part: feature:746126-746194:-1:exon
so has part: feature:745454-745568:-1:exon
so has part: feature:740932-741022:-1:exon
so has part: feature:734631-734750:-1:exon
so has part: feature:732950-733066:-1:exon
so has part: feature:732146-732295:-1:exon
so has part: feature:731161-731285:-1:exon
so has part: feature:730607-730721:-1:exon
so has part: feature:730127-730246:-1:exon
so has part: feature:728861-729052:-1:exon
so has part: feature:727364-727555:-1:exon
so has part: feature:727075-727246:-1:exon
so has part: feature:724476-724564:-1:exon
so has part: feature:723818-723906:-1:exon
so has part: feature:723534-723600:-1:exon
so has part: feature:721424-721539:-1:exon
so has part: feature:721251-721320:-1:exon
so has part: feature:720845-720937:-1:exon
so has part: feature:719612-719704:-1:exon
so has part: feature:718540-718665:-1:exon
so has part: feature:717583-717804:-1:exon
so has part: feature:715130-715222:-1:exon
so has part: feature:714764-714842:-1:exon
so has part: feature:713791-713860:-1:exon
so has part: feature:713200-713306:-1:exon
so has part: feature:713012-713121:-1:exon
so has part: feature:712695-712807:-1:exon
so has part: feature:711316-711416:-1:exon
so has part: feature:708157-708197:-1:exon

XP_032604221.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:753877-753931:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:746126-746194:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:745454-745568:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:740932-741022:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:734631-734750:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:732950-733066:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:732146-732295:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:731161-731285:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:730607-730721:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:730127-730246:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:728861-729052:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:727364-727555:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:727075-727246:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:724476-724564:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:723818-723906:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:723534-723600:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:721424-721539:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:721251-721320:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:720845-720937:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:719612-719704:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:718540-718665:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:717583-717804:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:715130-715222:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:714764-714842:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:713791-713860:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:713200-713306:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:713012-713121:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:712695-712807:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:711316-711416:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:708157-708197:-1:exon

MCF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: MCF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proto-oncogene DBL isoform X3
translation: MAEAGPRRGGRPSRHAASFPGNLHLVMVLRPTGFFQRTFTDIGFRFSQEDFLLKLPVVMLSSVSDLLTYIDEQQLTPELGGTLEYCHSEWVIFRTAIESFALTVKEIAQLLQSFGTELAEAELPEDMLSIQRILALRTERYRQLKEDITAVTKEGNLLLSSFEEPDSGECSQDQQQERPGDWETVNRLLGQLREMETAFDGFWEKHQLKMEQYLQLWKFEQSFQEVKNAIEFLMGQQAELPDTGDSIPQVKQRLKDLDHFDGMAQELVGKAQLVILHGHQLAANHHYALNLICQQCNELRHHSDLLAEDIKRKQMRLQKTLDLHTRLQQALQCCDEGAYLLANQQMDKCQSKEGAQKALQDIERFLESSSSYLNCDPQALQYDFEAVLTPELKCQIQSLQVKLENVRSMFENRQCCFRRLLDKHVRPVQLVAPRPENPPRAKSPLFSPKHGVDFNSSLKFSFDLSLPGKKTSRKTPSSRKIEVMHDYQEKRNSLQYFISDSDDSLDILKGHVINELIETERVYVEELFTVLTGYRAEMDNPAMLILLPPVLRNRKDVLFGNMPEIYDFHNKIFLHSLENCLGAPERVGCCFLDRREDFQMYEKYCQNKPRSESLWRQCSESSFFQECQRKLEHKLGLDSYLLKPVQRLTKYQLLLKELLKYSTSCDGVQELQEALVAMLDLLKSVNDSMHQISITGYDGDLSELGKVLMQGSFSVWAGHRKGPTKMKELARFKPMQRHLFLYEKALVFCKKREEHGDGYDKTSSYSFKHFLKMNAVGITENVKGDHRKFEIWYSGREEVYVVQAQTVDLKMAWLNEIRKILFKQQELIKAGEKQQPGSCSEQLPLSSQPGDRKQQRASISSEENDSERSSPVLQDCGLLSPQRQPHRGWPGGSQSLEICEGLEEWSGQQYLSTCSDTEEEENQLSPGKYKALADCKRRGSEDLLVKNGDEIQLLHEDGEGQWLVKNLNRRKEGWIPVHSLQIVVGDCRFRNAKVADAALCNTRKFSSP
SIO_010081: MCF2
subclass of: SO_0000673
so part of: MCF2
location: complement(join(708157..708197,711316..711416,712695..712807,713012..713121,713200..713306,713791..713857,714764..714842,715130..715222,717583..717804,718540..718665,719612..719704,720845..720937,721251..721320,721424..721539,723534..723600,723818..723906,724476..724564,727075..727246,727364..727555,728861..729052,730127..730246,730607..730721,731161..731285,732146..732295,732950..733066,734631..734750,738428..738475))
location: region:708157-738475:-1
so has part: feature:738428-738475:-1:exon
so has part: feature:734631-734750:-1:exon
so has part: feature:732950-733066:-1:exon
so has part: feature:732146-732295:-1:exon
so has part: feature:731161-731285:-1:exon
so has part: feature:730607-730721:-1:exon
so has part: feature:730127-730246:-1:exon
so has part: feature:728861-729052:-1:exon
so has part: feature:727364-727555:-1:exon
so has part: feature:727075-727246:-1:exon
so has part: feature:724476-724564:-1:exon
so has part: feature:723818-723906:-1:exon
so has part: feature:723534-723600:-1:exon
so has part: feature:721424-721539:-1:exon
so has part: feature:721251-721320:-1:exon
so has part: feature:720845-720937:-1:exon
so has part: feature:719612-719704:-1:exon
so has part: feature:718540-718665:-1:exon
so has part: feature:717583-717804:-1:exon
so has part: feature:715130-715222:-1:exon
so has part: feature:714764-714842:-1:exon
so has part: feature:713791-713857:-1:exon
so has part: feature:713200-713306:-1:exon
so has part: feature:713012-713121:-1:exon
so has part: feature:712695-712807:-1:exon
so has part: feature:711316-711416:-1:exon
so has part: feature:708157-708197:-1:exon

XP_041572055.1
type: Protein
SIO_000068: ncbiprotein

position:738475:-1
position: 738475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:738428-738475:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:734631-734750:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:732950-733066:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:732146-732295:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:731161-731285:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:730607-730721:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:730127-730246:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:728861-729052:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:727364-727555:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:727075-727246:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:724476-724564:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:723818-723906:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:723534-723600:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:721424-721539:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:721251-721320:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:720845-720937:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:719612-719704:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:718540-718665:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:717583-717804:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:715130-715222:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:714764-714842:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:713791-713857:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:713200-713306:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:713012-713121:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:712695-712807:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:711316-711416:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:708157-708197:-1:exon

ATP11C
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: ATP11C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(758028..810185)
location: region:758028-810185:-1
so has part: feature:758028-810185:-1:exon
subclass of: SO_0000010

100223014
type: Gene
SIO_000068: ncbigene

position:758028:-1
position: 758028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:810185:-1
position: 810185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:758028-810185:-1:exon

ATP11C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: ATP11C
product: ATPase phospholipid transporting 11C, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, 1 long SRA read, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 43 samples with support for all annotated introns
transcript id: XM_030272380.3
SIO_010081: ATP11C
subclass of: SO_0000673
so part of: ATP11C
location: complement(join(758028..761329,765406..765559,766918..767021,767783..767848,769827..769962,772311..772438,773452..773511,773879..774024,774861..774963,775610..775781,776113..776376,776908..777089,777621..777724,778362..778435,779297..779368,780228..780385,780476..780637,781525..781722,782512..782662,783029..783110,783622..783686,784498..784548,785156..785259,786895..787023,787607..787714,788671..788751,791727..791816,793414..793533,810041..810185))
location: region:758028-810185:-1
so has part: feature:810041-810185:-1:exon
so has part: feature:793414-793533:-1:exon
so has part: feature:791727-791816:-1:exon
so has part: feature:788671-788751:-1:exon
so has part: feature:787607-787714:-1:exon
so has part: feature:786895-787023:-1:exon
so has part: feature:785156-785259:-1:exon
so has part: feature:784498-784548:-1:exon
so has part: feature:783622-783686:-1:exon
so has part: feature:783029-783110:-1:exon
so has part: feature:782512-782662:-1:exon
so has part: feature:781525-781722:-1:exon
so has part: feature:780476-780637:-1:exon
so has part: feature:780228-780385:-1:exon
so has part: feature:779297-779368:-1:exon
so has part: feature:778362-778435:-1:exon
so has part: feature:777621-777724:-1:exon
so has part: feature:776908-777089:-1:exon
so has part: feature:776113-776376:-1:exon
so has part: feature:775610-775781:-1:exon
so has part: feature:774861-774963:-1:exon
so has part: feature:773879-774024:-1:exon
so has part: feature:773452-773511:-1:exon
so has part: feature:772311-772438:-1:exon
so has part: feature:769827-769962:-1:exon
so has part: feature:767783-767848:-1:exon
so has part: feature:766918-767021:-1:exon
so has part: feature:765406-765559:-1:exon
so has part: feature:758028-761329:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:810041-810185:-1:exon

position:810041:-1
position: 810041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:793414-793533:-1:exon

position:793414:-1
position: 793414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:793533:-1
position: 793533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:791727-791816:-1:exon

position:791727:-1
position: 791727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:791816:-1
position: 791816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:788671-788751:-1:exon

position:788671:-1
position: 788671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:788751:-1
position: 788751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:787607-787714:-1:exon

position:787607:-1
position: 787607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:787714:-1
position: 787714
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ATP11C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: ATP11C
product: ATPase phospholipid transporting 11C, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, 1 long SRA read, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_030272384.3
SIO_010081: ATP11C
subclass of: SO_0000673
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position:760687:-1
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reference: sequence
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ATP11C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: ATP11C
product: ATPase phospholipid transporting 11C, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, 2 long SRA reads, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 53 samples with support for all annotated introns
transcript id: XM_030272379.3
SIO_010081: ATP11C
subclass of: SO_0000673
so part of: ATP11C
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location: region:758028-810185:-1
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ATP11C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: ATP11C
product: ATPase phospholipid transporting 11C, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, 1 long SRA read, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_030272383.3
SIO_010081: ATP11C
subclass of: SO_0000673
so part of: ATP11C
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urn:…
SIO_000300: 17
SIO_000628: feature:777621-777724:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:776908-777089:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:776113-776376:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:775610-775784:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:774861-774963:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:773879-774024:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:773452-773511:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:772311-772438:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:769827-769962:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:767783-767848:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:766918-767021:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:765406-765559:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:763377-763467:-1:exon

position:763377:-1
position: 763377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:763467:-1
position: 763467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:758028-760687:-1:exon

ATP11C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: ATP11C
product: ATPase phospholipid transporting 11C, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, 3 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 52 samples with support for all annotated introns
transcript id: XM_032748333.2
SIO_010081: ATP11C
subclass of: SO_0000673
so part of: ATP11C
location: complement(join(758028..761329,763377..763467,765406..765559,766918..767021,767783..767848,769827..769962,772311..772438,773452..773511,773879..774024,774861..774963,775610..775784,776113..776376,776908..777089,777621..777724,778362..778435,779297..779368,780228..780385,780476..780637,781525..781722,782512..782662,783029..783110,783622..783686,784498..784548,785156..785259,786895..787023,787607..787714,788671..788751,791727..791816,793414..793533,810041..810185))
location: region:758028-810185:-1
so has part: feature:810041-810185:-1:exon
so has part: feature:793414-793533:-1:exon
so has part: feature:791727-791816:-1:exon
so has part: feature:788671-788751:-1:exon
so has part: feature:787607-787714:-1:exon
so has part: feature:786895-787023:-1:exon
so has part: feature:785156-785259:-1:exon
so has part: feature:784498-784548:-1:exon
so has part: feature:783622-783686:-1:exon
so has part: feature:783029-783110:-1:exon
so has part: feature:782512-782662:-1:exon
so has part: feature:781525-781722:-1:exon
so has part: feature:780476-780637:-1:exon
so has part: feature:780228-780385:-1:exon
so has part: feature:779297-779368:-1:exon
so has part: feature:778362-778435:-1:exon
so has part: feature:777621-777724:-1:exon
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so has part: feature:776113-776376:-1:exon
so has part: feature:775610-775784:-1:exon
so has part: feature:774861-774963:-1:exon
so has part: feature:773879-774024:-1:exon
so has part: feature:773452-773511:-1:exon
so has part: feature:772311-772438:-1:exon
so has part: feature:769827-769962:-1:exon
so has part: feature:767783-767848:-1:exon
so has part: feature:766918-767021:-1:exon
so has part: feature:765406-765559:-1:exon
so has part: feature:763377-763467:-1:exon
so has part: feature:758028-761329:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:810041-810185:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:793414-793533:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:791727-791816:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:788671-788751:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:787607-787714:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:786895-787023:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:785156-785259:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:784498-784548:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:783622-783686:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:783029-783110:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:782512-782662:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:781525-781722:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:780476-780637:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:780228-780385:-1:exon

urn:…
SIO_000300: 15
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urn:…
SIO_000300: 16
SIO_000628: feature:778362-778435:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:777621-777724:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:776908-777089:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:776113-776376:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:775610-775784:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:774861-774963:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:773879-774024:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:773452-773511:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:772311-772438:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:769827-769962:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:767783-767848:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:766918-767021:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:765406-765559:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:763377-763467:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:758028-761329:-1:exon

ATP11C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: ATP11C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipid-transporting ATPase IG isoform X5
translation: MLRRSLSRLCAGEEKRVGTRTVLVGHRPVPDTEACLAQKFCDNRIVSSKYTLWNFLPKNLFEQFRRIANFYFLIIFLVQVIVDTPTSPVTSGLPLFFVITVTAIKQGYEDWLRHRADNEVNKSNVFVVENAKQVRKESEKIKVGDIVEVKADETFPCDLIFLASSSTDGTCYVTTASLDGESNFKTHYAVRDTTVLCTDEAIDTLTATIECEQPQPDLYKFVGRIIIYGSNQEPVARSLGPENLLLKGATLKNTKKIYGVAVYTGMETKMALNYQGKSQKRSAVEKSINAFLIVYLCILLGKATVCTTLKYVWQSNPFNDEPWYNEKTKKERDTFKVLRMFTDFLSFMVLFNFIIPVSMYVTVEMQKFLGSFFISWDKEMFDEEIQEGALVNTSDLNEELGQVEYVFTDKTGTLTENSMEFIECCIDGHKYRDRVSELDGFSQPDGPLKYYGRAEKSREELFLRALCLCHTVQIKEADQVDGLVAHPERKYTYISSSPDEIALVKGAEKYGFTFLGLENNFMKIRNQKNETEMYQLLHVLNFDPVRRRMSVIVRASTGKLLLFCKGADSSIFPRVQQEEIQQTKVHVDRNAMDGYRTLCVAFKELTEKEYDRIDRQLNEAKMALQDREEKMAKVFDDTEADMHLIGATAVEDRLQEQLAETIEALHAAGMKVWVLTGDKMETAKSTCYACRLFQTSTELLELTARTVGESERKEDRLHELLLEYHKKLIQDIPKNRGGLKRSWTLSQEYGLIIDGSTLSLILNPSQDSGSSNYKSIFLQICLKCTAVLCCRMAPLQKAQIVRMVKNTKGSPITLSIGDGANDVSMILEAHVGIGIKGKEGRQASRNSDYAVPKFKHLRKLLLAHGHLYYVRIAHLVQYFFYKNLCFILPQFLYQFFCGFSQQPLYDAAYLTMYNICFTSLPILAYSLLEQHISIDTLTSDPQLYMKVSDNAMLQWRPFLYWTFLGAFEGLVFFFGVYFLFQNSSLEDNGKVFGNWTFGTIVFTVLVFTVTLKLALDTRFWTWMNHFVIWGSLAFYVFFSFFWGGVIWPFLKQQRMYFVFAHMLTSVSTWLAIILLIFISLFPEILLIVLKNIKEKNHQVELGAVRGLSTAAVAT
SIO_010081: ATP11C
subclass of: SO_0000673
so part of: ATP11C
location: complement(join(760637..760687,765406..765559,766918..767021,767783..767848,769827..769962,772311..772438,773452..773511,773879..774024,774861..774963,775610..775784,776113..776376,776908..777089,777621..777724,778362..778435,779297..779368,780228..780385,780476..780637,781525..781722,782512..782662,783029..783110,783622..783686,784498..784548,785156..785259,786895..787023,787607..787714,788671..788751,791727..791816,793414..793533,810041..810067))
location: region:760637-810067:-1
so has part: feature:810041-810067:-1:exon
so has part: feature:793414-793533:-1:exon
so has part: feature:791727-791816:-1:exon
so has part: feature:788671-788751:-1:exon
so has part: feature:787607-787714:-1:exon
so has part: feature:786895-787023:-1:exon
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so has part: feature:783622-783686:-1:exon
so has part: feature:783029-783110:-1:exon
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so has part: feature:781525-781722:-1:exon
so has part: feature:780476-780637:-1:exon
so has part: feature:780228-780385:-1:exon
so has part: feature:779297-779368:-1:exon
so has part: feature:778362-778435:-1:exon
so has part: feature:777621-777724:-1:exon
so has part: feature:776908-777089:-1:exon
so has part: feature:776113-776376:-1:exon
so has part: feature:775610-775784:-1:exon
so has part: feature:774861-774963:-1:exon
so has part: feature:773879-774024:-1:exon
so has part: feature:773452-773511:-1:exon
so has part: feature:772311-772438:-1:exon
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so has part: feature:767783-767848:-1:exon
so has part: feature:766918-767021:-1:exon
so has part: feature:765406-765559:-1:exon
so has part: feature:760637-760687:-1:exon

XP_030128244.3
type: Protein
SIO_000068: ncbiprotein

position:760637:-1
position: 760637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:810067:-1
position: 810067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:810041-810067:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:793414-793533:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:791727-791816:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:788671-788751:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:787607-787714:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:786895-787023:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:785156-785259:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:784498-784548:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:783622-783686:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:783029-783110:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:782512-782662:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:781525-781722:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:780476-780637:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:780228-780385:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:779297-779368:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:778362-778435:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:777621-777724:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:776908-777089:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:776113-776376:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:775610-775784:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:774861-774963:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:773879-774024:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:773452-773511:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:772311-772438:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:769827-769962:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:767783-767848:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:766918-767021:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:765406-765559:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:760637-760687:-1:exon

ATP11C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: ATP11C
product: ATPase phospholipid transporting 11C, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_030272381.3
SIO_010081: ATP11C
subclass of: SO_0000673
so part of: ATP11C
location: complement(join(761207..761329,762483..762578,765406..765559,766918..767021,767783..767848,769827..769962,772311..772438,773452..773511,773879..774024,774861..774963,775610..775784,776113..776376,776908..777089,777621..777724,778362..778435,779297..779368,780228..780385,780476..780637,781525..781722,782512..782662,783029..783110,783622..783686,784498..784548,785156..785259,786895..787023,787607..787714,788671..788751,791727..791816,793414..793533,810041..810185))
location: region:761207-810185:-1
so has part: feature:810041-810185:-1:exon
so has part: feature:793414-793533:-1:exon
so has part: feature:791727-791816:-1:exon
so has part: feature:788671-788751:-1:exon
so has part: feature:787607-787714:-1:exon
so has part: feature:786895-787023:-1:exon
so has part: feature:785156-785259:-1:exon
so has part: feature:784498-784548:-1:exon
so has part: feature:783622-783686:-1:exon
so has part: feature:783029-783110:-1:exon
so has part: feature:782512-782662:-1:exon
so has part: feature:781525-781722:-1:exon
so has part: feature:780476-780637:-1:exon
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so has part: feature:778362-778435:-1:exon
so has part: feature:777621-777724:-1:exon
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so has part: feature:776113-776376:-1:exon
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so has part: feature:774861-774963:-1:exon
so has part: feature:773879-774024:-1:exon
so has part: feature:773452-773511:-1:exon
so has part: feature:772311-772438:-1:exon
so has part: feature:769827-769962:-1:exon
so has part: feature:767783-767848:-1:exon
so has part: feature:766918-767021:-1:exon
so has part: feature:765406-765559:-1:exon
so has part: feature:762483-762578:-1:exon
so has part: feature:761207-761329:-1:exon

position:761207:-1
position: 761207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:810041-810185:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:793414-793533:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:791727-791816:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:788671-788751:-1:exon

urn:…
SIO_000300: 5
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urn:…
SIO_000300: 6
SIO_000628: feature:786895-787023:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:785156-785259:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:784498-784548:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:783622-783686:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:783029-783110:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:782512-782662:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:781525-781722:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:780476-780637:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:780228-780385:-1:exon

urn:…
SIO_000300: 15
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urn:…
SIO_000300: 16
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urn:…
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urn:…
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SIO_000628: feature:776908-777089:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:776113-776376:-1:exon

urn:…
SIO_000300: 20
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urn:…
SIO_000300: 21
SIO_000628: feature:774861-774963:-1:exon

urn:…
SIO_000300: 22
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urn:…
SIO_000300: 23
SIO_000628: feature:773452-773511:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:772311-772438:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:769827-769962:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:767783-767848:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:766918-767021:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:765406-765559:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:762483-762578:-1:exon

position:762483:-1
position: 762483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:762578:-1
position: 762578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:761207-761329:-1:exon

ATP11C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: ATP11C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipid-transporting ATPase IG isoform X2
translation: MLRRSLSRLCAGEEKRVGTRTVLVGHRPVPDTEACLAQKFCDNRIVSSKYTLWNFLPKNLFEQFRRIANFYFLIIFLVQVIVDTPTSPVTSGLPLFFVITVTAIKQGYEDWLRHRADNEVNKSNVFVVENAKQVRKESEKIKVGDIVEVKADETFPCDLIFLASSSTDGTCYVTTASLDGESNFKTHYAVRDTTVLCTDEAIDTLTATIECEQPQPDLYKFVGRIIIYGSNQEPVARSLGPENLLLKGATLKNTKKIYGVAVYTGMETKMALNYQGKSQKRSAVEKSINAFLIVYLCILLGKATVCTTLKYVWQSNPFNDEPWYNEKTKKERDTFKVLRMFTDFLSFMVLFNFIIPVSMYVTVEMQKFLGSFFISWDKEMFDEEIQEGALVNTSDLNEELGQVEYVFTDKTGTLTENSMEFIECCIDGHKYRDRVSELDGFSQPDGPLKYYGRAEKSREELFLRALCLCHTVQIKEADQVDGLVAHPERKYTYISSSPDEIALVKGAEKYGFTFLGLENNFMKIRNQKNETEMYQLLHVLNFDPVRRRMSVIVRASTGKLLLFCKGADSSIFPRVQQEEIQQTKVHVDRNAMDGYRTLCVAFKELTEKEYDRIDRQLNEAKMALQDREEKMAKVFDDTEADMHLIGATAVEDRLQEQLAETIEALHAAGMKVWVLTGDKMETAKSTCYACRLFQTSTELLELTARTVGESERKEDRLHELLLEYHKKLIQDIPKNRGGLKSWTLSQEYGLIIDGSTLSLILNPSQDSGSSNYKSIFLQICLKCTAVLCCRMAPLQKAQIVRMVKNTKGSPITLSIGDGANDVSMILEAHVGIGIKGKEGRQASRNSDYAVPKFKHLRKLLLAHGHLYYVRIAHLVQYFFYKNLCFILPQFLYQFFCGFSQQPLYDAAYLTMYNICFTSLPILAYSLLEQHISIDTLTSDPQLYMKVSDNAMLQWRPFLYWTFLGAFEGLVFFFGVYFLFQNSSLEDNGKVFGNWTFGTIVFTVLVFTVTLKLALDTRFWTWMNHFVIWGSLAFYVFFSFFWGGVIWPFLKQQRMYFVFAHMLTSVSTWLAIILLIFISLFPEILLIVLKNIKEKNHQAGPFDLPVLVSYKRIENGYVKAEDAVTNLAERYPLRIP
SIO_010081: ATP11C
subclass of: SO_0000673
so part of: ATP11C
location: complement(join(761213..761329,765406..765559,766918..767021,767783..767848,769827..769962,772311..772438,773452..773511,773879..774024,774861..774963,775610..775781,776113..776376,776908..777089,777621..777724,778362..778435,779297..779368,780228..780385,780476..780637,781525..781722,782512..782662,783029..783110,783622..783686,784498..784548,785156..785259,786895..787023,787607..787714,788671..788751,791727..791816,793414..793533,810041..810067))
location: region:761213-810067:-1
so has part: feature:810041-810067:-1:exon
so has part: feature:793414-793533:-1:exon
so has part: feature:791727-791816:-1:exon
so has part: feature:788671-788751:-1:exon
so has part: feature:787607-787714:-1:exon
so has part: feature:786895-787023:-1:exon
so has part: feature:785156-785259:-1:exon
so has part: feature:784498-784548:-1:exon
so has part: feature:783622-783686:-1:exon
so has part: feature:783029-783110:-1:exon
so has part: feature:782512-782662:-1:exon
so has part: feature:781525-781722:-1:exon
so has part: feature:780476-780637:-1:exon
so has part: feature:780228-780385:-1:exon
so has part: feature:779297-779368:-1:exon
so has part: feature:778362-778435:-1:exon
so has part: feature:777621-777724:-1:exon
so has part: feature:776908-777089:-1:exon
so has part: feature:776113-776376:-1:exon
so has part: feature:775610-775781:-1:exon
so has part: feature:774861-774963:-1:exon
so has part: feature:773879-774024:-1:exon
so has part: feature:773452-773511:-1:exon
so has part: feature:772311-772438:-1:exon
so has part: feature:769827-769962:-1:exon
so has part: feature:767783-767848:-1:exon
so has part: feature:766918-767021:-1:exon
so has part: feature:765406-765559:-1:exon
so has part: feature:761213-761329:-1:exon

XP_030128240.3
type: Protein
SIO_000068: ncbiprotein

position:761213:-1
position: 761213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:810041-810067:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:793414-793533:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:791727-791816:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:788671-788751:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:787607-787714:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:786895-787023:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:785156-785259:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:784498-784548:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:783622-783686:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:783029-783110:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:782512-782662:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:781525-781722:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:780476-780637:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:780228-780385:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:779297-779368:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:778362-778435:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:777621-777724:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:776908-777089:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:776113-776376:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:775610-775781:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:774861-774963:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:773879-774024:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:773452-773511:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:772311-772438:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:769827-769962:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:767783-767848:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:766918-767021:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:765406-765559:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:761213-761329:-1:exon

ATP11C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: ATP11C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipid-transporting ATPase IG isoform X1
translation: MLRRSLSRLCAGEEKRVGTRTVLVGHRPVPDTEACLAQKFCDNRIVSSKYTLWNFLPKNLFEQFRRIANFYFLIIFLVQVIVDTPTSPVTSGLPLFFVITVTAIKQGYEDWLRHRADNEVNKSNVFVVENAKQVRKESEKIKVGDIVEVKADETFPCDLIFLASSSTDGTCYVTTASLDGESNFKTHYAVRDTTVLCTDEAIDTLTATIECEQPQPDLYKFVGRIIIYGSNQEPVARSLGPENLLLKGATLKNTKKIYGVAVYTGMETKMALNYQGKSQKRSAVEKSINAFLIVYLCILLGKATVCTTLKYVWQSNPFNDEPWYNEKTKKERDTFKVLRMFTDFLSFMVLFNFIIPVSMYVTVEMQKFLGSFFISWDKEMFDEEIQEGALVNTSDLNEELGQVEYVFTDKTGTLTENSMEFIECCIDGHKYRDRVSELDGFSQPDGPLKYYGRAEKSREELFLRALCLCHTVQIKEADQVDGLVAHPERKYTYISSSPDEIALVKGAEKYGFTFLGLENNFMKIRNQKNETEMYQLLHVLNFDPVRRRMSVIVRASTGKLLLFCKGADSSIFPRVQQEEIQQTKVHVDRNAMDGYRTLCVAFKELTEKEYDRIDRQLNEAKMALQDREEKMAKVFDDTEADMHLIGATAVEDRLQEQLAETIEALHAAGMKVWVLTGDKMETAKSTCYACRLFQTSTELLELTARTVGESERKEDRLHELLLEYHKKLIQDIPKNRGGLKRSWTLSQEYGLIIDGSTLSLILNPSQDSGSSNYKSIFLQICLKCTAVLCCRMAPLQKAQIVRMVKNTKGSPITLSIGDGANDVSMILEAHVGIGIKGKEGRQASRNSDYAVPKFKHLRKLLLAHGHLYYVRIAHLVQYFFYKNLCFILPQFLYQFFCGFSQQPLYDAAYLTMYNICFTSLPILAYSLLEQHISIDTLTSDPQLYMKVSDNAMLQWRPFLYWTFLGAFEGLVFFFGVYFLFQNSSLEDNGKVFGNWTFGTIVFTVLVFTVTLKLALDTRFWTWMNHFVIWGSLAFYVFFSFFWGGVIWPFLKQQRMYFVFAHMLTSVSTWLAIILLIFISLFPEILLIVLKNIKEKNHQAGPFDLPVLVSYKRIENGYVKAEDAVTNLAERYPLRIP
SIO_010081: ATP11C
subclass of: SO_0000673
so part of: ATP11C
location: complement(join(761213..761329,765406..765559,766918..767021,767783..767848,769827..769962,772311..772438,773452..773511,773879..774024,774861..774963,775610..775784,776113..776376,776908..777089,777621..777724,778362..778435,779297..779368,780228..780385,780476..780637,781525..781722,782512..782662,783029..783110,783622..783686,784498..784548,785156..785259,786895..787023,787607..787714,788671..788751,791727..791816,793414..793533,810041..810067))
location: region:761213-810067:-1
so has part: feature:810041-810067:-1:exon
so has part: feature:793414-793533:-1:exon
so has part: feature:791727-791816:-1:exon
so has part: feature:788671-788751:-1:exon
so has part: feature:787607-787714:-1:exon
so has part: feature:786895-787023:-1:exon
so has part: feature:785156-785259:-1:exon
so has part: feature:784498-784548:-1:exon
so has part: feature:783622-783686:-1:exon
so has part: feature:783029-783110:-1:exon
so has part: feature:782512-782662:-1:exon
so has part: feature:781525-781722:-1:exon
so has part: feature:780476-780637:-1:exon
so has part: feature:780228-780385:-1:exon
so has part: feature:779297-779368:-1:exon
so has part: feature:778362-778435:-1:exon
so has part: feature:777621-777724:-1:exon
so has part: feature:776908-777089:-1:exon
so has part: feature:776113-776376:-1:exon
so has part: feature:775610-775784:-1:exon
so has part: feature:774861-774963:-1:exon
so has part: feature:773879-774024:-1:exon
so has part: feature:773452-773511:-1:exon
so has part: feature:772311-772438:-1:exon
so has part: feature:769827-769962:-1:exon
so has part: feature:767783-767848:-1:exon
so has part: feature:766918-767021:-1:exon
so has part: feature:765406-765559:-1:exon
so has part: feature:761213-761329:-1:exon

XP_030128239.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:810041-810067:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:793414-793533:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:791727-791816:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:788671-788751:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:787607-787714:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:786895-787023:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:785156-785259:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:784498-784548:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:783622-783686:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:783029-783110:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:782512-782662:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:781525-781722:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:780476-780637:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:780228-780385:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:779297-779368:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:778362-778435:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:777621-777724:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:776908-777089:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:776113-776376:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:775610-775784:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:774861-774963:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:773879-774024:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:773452-773511:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:772311-772438:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:769827-769962:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:767783-767848:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:766918-767021:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:765406-765559:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:761213-761329:-1:exon

ATP11C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: ATP11C
product: ATPase phospholipid transporting 11C, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_041716123.1
SIO_010081: ATP11C
subclass of: SO_0000673
so part of: ATP11C
location: complement(join(761431..762578,765406..765559,766918..767021,767783..767848,769827..769962,772311..772438,773452..773511,773879..774024,774861..774963,775610..775784,776113..776376,776908..777089,777621..777724,778362..778435,779297..779368,780228..780385,780476..780637,781525..781722,782512..782662,783029..783110,783622..783686,784498..784548,785156..785259,786895..787023,787607..787714,788671..788751,791727..791816,793414..793533,810041..810185))
location: region:761431-810185:-1
so has part: feature:810041-810185:-1:exon
so has part: feature:793414-793533:-1:exon
so has part: feature:791727-791816:-1:exon
so has part: feature:788671-788751:-1:exon
so has part: feature:787607-787714:-1:exon
so has part: feature:786895-787023:-1:exon
so has part: feature:785156-785259:-1:exon
so has part: feature:784498-784548:-1:exon
so has part: feature:783622-783686:-1:exon
so has part: feature:783029-783110:-1:exon
so has part: feature:782512-782662:-1:exon
so has part: feature:781525-781722:-1:exon
so has part: feature:780476-780637:-1:exon
so has part: feature:780228-780385:-1:exon
so has part: feature:779297-779368:-1:exon
so has part: feature:778362-778435:-1:exon
so has part: feature:777621-777724:-1:exon
so has part: feature:776908-777089:-1:exon
so has part: feature:776113-776376:-1:exon
so has part: feature:775610-775784:-1:exon
so has part: feature:774861-774963:-1:exon
so has part: feature:773879-774024:-1:exon
so has part: feature:773452-773511:-1:exon
so has part: feature:772311-772438:-1:exon
so has part: feature:769827-769962:-1:exon
so has part: feature:767783-767848:-1:exon
so has part: feature:766918-767021:-1:exon
so has part: feature:765406-765559:-1:exon
so has part: feature:761431-762578:-1:exon

position:761431:-1
position: 761431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:810041-810185:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:793414-793533:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:791727-791816:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:788671-788751:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:787607-787714:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:786895-787023:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:785156-785259:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:784498-784548:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:783622-783686:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:783029-783110:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:782512-782662:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:781525-781722:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:780476-780637:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:780228-780385:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:779297-779368:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:778362-778435:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:777621-777724:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:776908-777089:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:776113-776376:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:775610-775784:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:774861-774963:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:773879-774024:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:773452-773511:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:772311-772438:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:769827-769962:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:767783-767848:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:766918-767021:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:765406-765559:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:761431-762578:-1:exon

ATP11C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: ATP11C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipid-transporting ATPase IG isoform X3
translation: MLRRSLSRLCAGEEKRVGTRTVLVGHRPVPDTEACLAQKFCDNRIVSSKYTLWNFLPKNLFEQFRRIANFYFLIIFLVQVIVDTPTSPVTSGLPLFFVITVTAIKQGYEDWLRHRADNEVNKSNVFVVENAKQVRKESEKIKVGDIVEVKADETFPCDLIFLASSSTDGTCYVTTASLDGESNFKTHYAVRDTTVLCTDEAIDTLTATIECEQPQPDLYKFVGRIIIYGSNQEPVARSLGPENLLLKGATLKNTKKIYGVAVYTGMETKMALNYQGKSQKRSAVEKSINAFLIVYLCILLGKATVCTTLKYVWQSNPFNDEPWYNEKTKKERDTFKVLRMFTDFLSFMVLFNFIIPVSMYVTVEMQKFLGSFFISWDKEMFDEEIQEGALVNTSDLNEELGQVEYVFTDKTGTLTENSMEFIECCIDGHKYRDRVSELDGFSQPDGPLKYYGRAEKSREELFLRALCLCHTVQIKEADQVDGLVAHPERKYTYISSSPDEIALVKGAEKYGFTFLGLENNFMKIRNQKNETEMYQLLHVLNFDPVRRRMSVIVRASTGKLLLFCKGADSSIFPRVQQEEIQQTKVHVDRNAMDGYRTLCVAFKELTEKEYDRIDRQLNEAKMALQDREEKMAKVFDDTEADMHLIGATAVEDRLQEQLAETIEALHAAGMKVWVLTGDKMETAKSTCYACRLFQTSTELLELTARTVGESERKEDRLHELLLEYHKKLIQDIPKNRGGLKRSWTLSQEYGLIIDGSTLSLILNPSQDSGSSNYKSIFLQICLKCTAVLCCRMAPLQKAQIVRMVKNTKGSPITLSIGDGANDVSMILEAHVGIGIKGKEGRQASRNSDYAVPKFKHLRKLLLAHGHLYYVRIAHLVQYFFYKNLCFILPQFLYQFFCGFSQQPLYDAAYLTMYNICFTSLPILAYSLLEQHISIDTLTSDPQLYMKVSDNAMLQWRPFLYWTFLGAFEGLVFFFGVYFLFQNSSLEDNGKVFGNWTFGTIVFTVLVFTVTLKLALDTRFWTWMNHFVIWGSLAFYVFFSFFWGGVIWPFLKQQRMYFVFAHMLTSVSTWLAIILLIFISLFPEILLIVLKNIKEKNHQSSRKAPDSLSARPSATPLLLRTFSDESNVL
SIO_010081: ATP11C
subclass of: SO_0000673
so part of: ATP11C
location: complement(join(762486..762578,765406..765559,766918..767021,767783..767848,769827..769962,772311..772438,773452..773511,773879..774024,774861..774963,775610..775784,776113..776376,776908..777089,777621..777724,778362..778435,779297..779368,780228..780385,780476..780637,781525..781722,782512..782662,783029..783110,783622..783686,784498..784548,785156..785259,786895..787023,787607..787714,788671..788751,791727..791816,793414..793533,810041..810067))
location: region:762486-810067:-1
so has part: feature:810041-810067:-1:exon
so has part: feature:793414-793533:-1:exon
so has part: feature:791727-791816:-1:exon
so has part: feature:788671-788751:-1:exon
so has part: feature:787607-787714:-1:exon
so has part: feature:786895-787023:-1:exon
so has part: feature:785156-785259:-1:exon
so has part: feature:784498-784548:-1:exon
so has part: feature:783622-783686:-1:exon
so has part: feature:783029-783110:-1:exon
so has part: feature:782512-782662:-1:exon
so has part: feature:781525-781722:-1:exon
so has part: feature:780476-780637:-1:exon
so has part: feature:780228-780385:-1:exon
so has part: feature:779297-779368:-1:exon
so has part: feature:778362-778435:-1:exon
so has part: feature:777621-777724:-1:exon
so has part: feature:776908-777089:-1:exon
so has part: feature:776113-776376:-1:exon
so has part: feature:775610-775784:-1:exon
so has part: feature:774861-774963:-1:exon
so has part: feature:773879-774024:-1:exon
so has part: feature:773452-773511:-1:exon
so has part: feature:772311-772438:-1:exon
so has part: feature:769827-769962:-1:exon
so has part: feature:767783-767848:-1:exon
so has part: feature:766918-767021:-1:exon
so has part: feature:765406-765559:-1:exon
so has part: feature:762486-762578:-1:exon

XP_041572057.1
type: Protein
SIO_000068: ncbiprotein

position:762486:-1
position: 762486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:810041-810067:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:793414-793533:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:791727-791816:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:788671-788751:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:787607-787714:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:786895-787023:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:785156-785259:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:784498-784548:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:783622-783686:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:783029-783110:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:782512-782662:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:781525-781722:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:780476-780637:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:780228-780385:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:779297-779368:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:778362-778435:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:777621-777724:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:776908-777089:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:776113-776376:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:775610-775784:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:774861-774963:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:773879-774024:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:773452-773511:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:772311-772438:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:769827-769962:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:767783-767848:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:766918-767021:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:765406-765559:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:762486-762578:-1:exon

ATP11C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: ATP11C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipid-transporting ATPase IG isoform X3
translation: MLRRSLSRLCAGEEKRVGTRTVLVGHRPVPDTEACLAQKFCDNRIVSSKYTLWNFLPKNLFEQFRRIANFYFLIIFLVQVIVDTPTSPVTSGLPLFFVITVTAIKQGYEDWLRHRADNEVNKSNVFVVENAKQVRKESEKIKVGDIVEVKADETFPCDLIFLASSSTDGTCYVTTASLDGESNFKTHYAVRDTTVLCTDEAIDTLTATIECEQPQPDLYKFVGRIIIYGSNQEPVARSLGPENLLLKGATLKNTKKIYGVAVYTGMETKMALNYQGKSQKRSAVEKSINAFLIVYLCILLGKATVCTTLKYVWQSNPFNDEPWYNEKTKKERDTFKVLRMFTDFLSFMVLFNFIIPVSMYVTVEMQKFLGSFFISWDKEMFDEEIQEGALVNTSDLNEELGQVEYVFTDKTGTLTENSMEFIECCIDGHKYRDRVSELDGFSQPDGPLKYYGRAEKSREELFLRALCLCHTVQIKEADQVDGLVAHPERKYTYISSSPDEIALVKGAEKYGFTFLGLENNFMKIRNQKNETEMYQLLHVLNFDPVRRRMSVIVRASTGKLLLFCKGADSSIFPRVQQEEIQQTKVHVDRNAMDGYRTLCVAFKELTEKEYDRIDRQLNEAKMALQDREEKMAKVFDDTEADMHLIGATAVEDRLQEQLAETIEALHAAGMKVWVLTGDKMETAKSTCYACRLFQTSTELLELTARTVGESERKEDRLHELLLEYHKKLIQDIPKNRGGLKRSWTLSQEYGLIIDGSTLSLILNPSQDSGSSNYKSIFLQICLKCTAVLCCRMAPLQKAQIVRMVKNTKGSPITLSIGDGANDVSMILEAHVGIGIKGKEGRQASRNSDYAVPKFKHLRKLLLAHGHLYYVRIAHLVQYFFYKNLCFILPQFLYQFFCGFSQQPLYDAAYLTMYNICFTSLPILAYSLLEQHISIDTLTSDPQLYMKVSDNAMLQWRPFLYWTFLGAFEGLVFFFGVYFLFQNSSLEDNGKVFGNWTFGTIVFTVLVFTVTLKLALDTRFWTWMNHFVIWGSLAFYVFFSFFWGGVIWPFLKQQRMYFVFAHMLTSVSTWLAIILLIFISLFPEILLIVLKNIKEKNHQSSRKAPDSLSARPSATPLLLRTFSDESNVL
SIO_010081: ATP11C
subclass of: SO_0000673
so part of: ATP11C
location: complement(join(762486..762578,765406..765559,766918..767021,767783..767848,769827..769962,772311..772438,773452..773511,773879..774024,774861..774963,775610..775784,776113..776376,776908..777089,777621..777724,778362..778435,779297..779368,780228..780385,780476..780637,781525..781722,782512..782662,783029..783110,783622..783686,784498..784548,785156..785259,786895..787023,787607..787714,788671..788751,791727..791816,793414..793533,810041..810067))
location: region:762486-810067:-1
so has part: feature:810041-810067:-1:exon
so has part: feature:793414-793533:-1:exon
so has part: feature:791727-791816:-1:exon
so has part: feature:788671-788751:-1:exon
so has part: feature:787607-787714:-1:exon
so has part: feature:786895-787023:-1:exon
so has part: feature:785156-785259:-1:exon
so has part: feature:784498-784548:-1:exon
so has part: feature:783622-783686:-1:exon
so has part: feature:783029-783110:-1:exon
so has part: feature:782512-782662:-1:exon
so has part: feature:781525-781722:-1:exon
so has part: feature:780476-780637:-1:exon
so has part: feature:780228-780385:-1:exon
so has part: feature:779297-779368:-1:exon
so has part: feature:778362-778435:-1:exon
so has part: feature:777621-777724:-1:exon
so has part: feature:776908-777089:-1:exon
so has part: feature:776113-776376:-1:exon
so has part: feature:775610-775784:-1:exon
so has part: feature:774861-774963:-1:exon
so has part: feature:773879-774024:-1:exon
so has part: feature:773452-773511:-1:exon
so has part: feature:772311-772438:-1:exon
so has part: feature:769827-769962:-1:exon
so has part: feature:767783-767848:-1:exon
so has part: feature:766918-767021:-1:exon
so has part: feature:765406-765559:-1:exon
so has part: feature:762486-762578:-1:exon

XP_030128241.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:810041-810067:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:793414-793533:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:791727-791816:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:788671-788751:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:787607-787714:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:786895-787023:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:785156-785259:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:784498-784548:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:783622-783686:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:783029-783110:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:782512-782662:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:781525-781722:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:780476-780637:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:780228-780385:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:779297-779368:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:778362-778435:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:777621-777724:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:776908-777089:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:776113-776376:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:775610-775784:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:774861-774963:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:773879-774024:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:773452-773511:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:772311-772438:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:769827-769962:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:767783-767848:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:766918-767021:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:765406-765559:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:762486-762578:-1:exon

ATP11C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: ATP11C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipid-transporting ATPase IG isoform X4
translation: MLRRSLSRLCAGEEKRVGTRTVLVGHRPVPDTEACLAQKFCDNRIVSSKYTLWNFLPKNLFEQFRRIANFYFLIIFLVQVIVDTPTSPVTSGLPLFFVITVTAIKQGYEDWLRHRADNEVNKSNVFVVENAKQVRKESEKIKVGDIVEVKADETFPCDLIFLASSSTDGTCYVTTASLDGESNFKTHYAVRDTTVLCTDEAIDTLTATIECEQPQPDLYKFVGRIIIYGSNQEPVARSLGPENLLLKGATLKNTKKIYGVAVYTGMETKMALNYQGKSQKRSAVEKSINAFLIVYLCILLGKATVCTTLKYVWQSNPFNDEPWYNEKTKKERDTFKVLRMFTDFLSFMVLFNFIIPVSMYVTVEMQKFLGSFFISWDKEMFDEEIQEGALVNTSDLNEELGQVEYVFTDKTGTLTENSMEFIECCIDGHKYRDRVSELDGFSQPDGPLKYYGRAEKSREELFLRALCLCHTVQIKEADQVDGLVAHPERKYTYISSSPDEIALVKGAEKYGFTFLGLENNFMKIRNQKNETEMYQLLHVLNFDPVRRRMSVIVRASTGKLLLFCKGADSSIFPRVQQEEIQQTKVHVDRNAMDGYRTLCVAFKELTEKEYDRIDRQLNEAKMALQDREEKMAKVFDDTEADMHLIGATAVEDRLQEQLAETIEALHAAGMKVWVLTGDKMETAKSTCYACRLFQTSTELLELTARTVGESERKEDRLHELLLEYHKKLIQDIPKNRGGLKRSWTLSQEYGLIIDGSTLSLILNPSQDSGSSNYKSIFLQICLKCTAVLCCRMAPLQKAQIVRMVKNTKGSPITLSIGDGANDVSMILEAHVGIGIKGKEGRQASRNSDYAVPKFKHLRKLLLAHGHLYYVRIAHLVQYFFYKNLCFILPQFLYQFFCGFSQQPLYDAAYLTMYNICFTSLPILAYSLLEQHISIDTLTSDPQLYMKVSDNAMLQWRPFLYWTFLGAFEGLVFFFGVYFLFQNSSLEDNGKVFGNWTFGTIVFTVLVFTVTLKLALDTRFWTWMNHFVIWGSLAFYVFFSFFWGGVIWPFLKQQRMYFVFAHMLTSVSTWLAIILLIFISLFPEILLIVLKNIKEKNHQVTKRLPSSGTSTIFMLSQTSSNHSFSWSE
SIO_010081: ATP11C
subclass of: SO_0000673
so part of: ATP11C
location: complement(join(763378..763467,765406..765559,766918..767021,767783..767848,769827..769962,772311..772438,773452..773511,773879..774024,774861..774963,775610..775784,776113..776376,776908..777089,777621..777724,778362..778435,779297..779368,780228..780385,780476..780637,781525..781722,782512..782662,783029..783110,783622..783686,784498..784548,785156..785259,786895..787023,787607..787714,788671..788751,791727..791816,793414..793533,810041..810067))
location: region:763378-810067:-1
so has part: feature:810041-810067:-1:exon
so has part: feature:793414-793533:-1:exon
so has part: feature:791727-791816:-1:exon
so has part: feature:788671-788751:-1:exon
so has part: feature:787607-787714:-1:exon
so has part: feature:786895-787023:-1:exon
so has part: feature:785156-785259:-1:exon
so has part: feature:784498-784548:-1:exon
so has part: feature:783622-783686:-1:exon
so has part: feature:783029-783110:-1:exon
so has part: feature:782512-782662:-1:exon
so has part: feature:781525-781722:-1:exon
so has part: feature:780476-780637:-1:exon
so has part: feature:780228-780385:-1:exon
so has part: feature:779297-779368:-1:exon
so has part: feature:778362-778435:-1:exon
so has part: feature:777621-777724:-1:exon
so has part: feature:776908-777089:-1:exon
so has part: feature:776113-776376:-1:exon
so has part: feature:775610-775784:-1:exon
so has part: feature:774861-774963:-1:exon
so has part: feature:773879-774024:-1:exon
so has part: feature:773452-773511:-1:exon
so has part: feature:772311-772438:-1:exon
so has part: feature:769827-769962:-1:exon
so has part: feature:767783-767848:-1:exon
so has part: feature:766918-767021:-1:exon
so has part: feature:765406-765559:-1:exon
so has part: feature:763378-763467:-1:exon

XP_032604224.2
type: Protein
SIO_000068: ncbiprotein

position:763378:-1
position: 763378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:810041-810067:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:793414-793533:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:791727-791816:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:788671-788751:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:787607-787714:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:786895-787023:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:785156-785259:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:784498-784548:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:783622-783686:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:783029-783110:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:782512-782662:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:781525-781722:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:780476-780637:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:780228-780385:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:779297-779368:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:778362-778435:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:777621-777724:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:776908-777089:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:776113-776376:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:775610-775784:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:774861-774963:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:773879-774024:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:773452-773511:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:772311-772438:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:769827-769962:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:767783-767848:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:766918-767021:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:765406-765559:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:763378-763467:-1:exon

ATP11C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: ATP11C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipid-transporting ATPase IG isoform X4
translation: MLRRSLSRLCAGEEKRVGTRTVLVGHRPVPDTEACLAQKFCDNRIVSSKYTLWNFLPKNLFEQFRRIANFYFLIIFLVQVIVDTPTSPVTSGLPLFFVITVTAIKQGYEDWLRHRADNEVNKSNVFVVENAKQVRKESEKIKVGDIVEVKADETFPCDLIFLASSSTDGTCYVTTASLDGESNFKTHYAVRDTTVLCTDEAIDTLTATIECEQPQPDLYKFVGRIIIYGSNQEPVARSLGPENLLLKGATLKNTKKIYGVAVYTGMETKMALNYQGKSQKRSAVEKSINAFLIVYLCILLGKATVCTTLKYVWQSNPFNDEPWYNEKTKKERDTFKVLRMFTDFLSFMVLFNFIIPVSMYVTVEMQKFLGSFFISWDKEMFDEEIQEGALVNTSDLNEELGQVEYVFTDKTGTLTENSMEFIECCIDGHKYRDRVSELDGFSQPDGPLKYYGRAEKSREELFLRALCLCHTVQIKEADQVDGLVAHPERKYTYISSSPDEIALVKGAEKYGFTFLGLENNFMKIRNQKNETEMYQLLHVLNFDPVRRRMSVIVRASTGKLLLFCKGADSSIFPRVQQEEIQQTKVHVDRNAMDGYRTLCVAFKELTEKEYDRIDRQLNEAKMALQDREEKMAKVFDDTEADMHLIGATAVEDRLQEQLAETIEALHAAGMKVWVLTGDKMETAKSTCYACRLFQTSTELLELTARTVGESERKEDRLHELLLEYHKKLIQDIPKNRGGLKRSWTLSQEYGLIIDGSTLSLILNPSQDSGSSNYKSIFLQICLKCTAVLCCRMAPLQKAQIVRMVKNTKGSPITLSIGDGANDVSMILEAHVGIGIKGKEGRQASRNSDYAVPKFKHLRKLLLAHGHLYYVRIAHLVQYFFYKNLCFILPQFLYQFFCGFSQQPLYDAAYLTMYNICFTSLPILAYSLLEQHISIDTLTSDPQLYMKVSDNAMLQWRPFLYWTFLGAFEGLVFFFGVYFLFQNSSLEDNGKVFGNWTFGTIVFTVLVFTVTLKLALDTRFWTWMNHFVIWGSLAFYVFFSFFWGGVIWPFLKQQRMYFVFAHMLTSVSTWLAIILLIFISLFPEILLIVLKNIKEKNHQVTKRLPSSGTSTIFMLSQTSSNHSFSWSE
SIO_010081: ATP11C
subclass of: SO_0000673
so part of: ATP11C
location: complement(join(763378..763467,765406..765559,766918..767021,767783..767848,769827..769962,772311..772438,773452..773511,773879..774024,774861..774963,775610..775784,776113..776376,776908..777089,777621..777724,778362..778435,779297..779368,780228..780385,780476..780637,781525..781722,782512..782662,783029..783110,783622..783686,784498..784548,785156..785259,786895..787023,787607..787714,788671..788751,791727..791816,793414..793533,810041..810067))
location: region:763378-810067:-1
so has part: feature:810041-810067:-1:exon
so has part: feature:793414-793533:-1:exon
so has part: feature:791727-791816:-1:exon
so has part: feature:788671-788751:-1:exon
so has part: feature:787607-787714:-1:exon
so has part: feature:786895-787023:-1:exon
so has part: feature:785156-785259:-1:exon
so has part: feature:784498-784548:-1:exon
so has part: feature:783622-783686:-1:exon
so has part: feature:783029-783110:-1:exon
so has part: feature:782512-782662:-1:exon
so has part: feature:781525-781722:-1:exon
so has part: feature:780476-780637:-1:exon
so has part: feature:780228-780385:-1:exon
so has part: feature:779297-779368:-1:exon
so has part: feature:778362-778435:-1:exon
so has part: feature:777621-777724:-1:exon
so has part: feature:776908-777089:-1:exon
so has part: feature:776113-776376:-1:exon
so has part: feature:775610-775784:-1:exon
so has part: feature:774861-774963:-1:exon
so has part: feature:773879-774024:-1:exon
so has part: feature:773452-773511:-1:exon
so has part: feature:772311-772438:-1:exon
so has part: feature:769827-769962:-1:exon
so has part: feature:767783-767848:-1:exon
so has part: feature:766918-767021:-1:exon
so has part: feature:765406-765559:-1:exon
so has part: feature:763378-763467:-1:exon

XP_030128243.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:810041-810067:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:793414-793533:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:791727-791816:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:788671-788751:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:787607-787714:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:786895-787023:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:785156-785259:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:784498-784548:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:783622-783686:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:783029-783110:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:782512-782662:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:781525-781722:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:780476-780637:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:780228-780385:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:779297-779368:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:778362-778435:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:777621-777724:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:776908-777089:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:776113-776376:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:775610-775784:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:774861-774963:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:773879-774024:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:773452-773511:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:772311-772438:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:769827-769962:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:767783-767848:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:766918-767021:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:765406-765559:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:763378-763467:-1:exon

ARL13A
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: ARL13A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(816198..>819930)
location: region:816198-819930:-1
so has part: feature:816198-819930:-1:exon
subclass of: SO_0000010

115495282
type: Gene
SIO_000068: ncbigene

position:816198:-1
position: 816198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:819930:-1
position: 819930
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:816198-819930:-1:exon

ARL13A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: ARL13A
product: ADP ribosylation factor like GTPase 13A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_041716281.1
SIO_010081: ARL13A
subclass of: SO_0000673
so part of: ARL13A
location: complement(join(816198..817337,817623..817724,818030..818210,818409..818502,818577..818719,818791..818896,819635..>819930))
location: region:816198-819930:-1
so has part: feature:819635-819930:-1:exon
so has part: feature:818791-818896:-1:exon
so has part: feature:818577-818719:-1:exon
so has part: feature:818409-818502:-1:exon
so has part: feature:818030-818210:-1:exon
so has part: feature:817623-817724:-1:exon
so has part: feature:816198-817337:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:819635-819930:-1:exon

position:819635:-1
position: 819635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:818791-818896:-1:exon

position:818791:-1
position: 818791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:818896:-1
position: 818896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:818577-818719:-1:exon

position:818577:-1
position: 818577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:818719:-1
position: 818719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:818409-818502:-1:exon

position:818409:-1
position: 818409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:818502:-1
position: 818502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:818030-818210:-1:exon

position:818030:-1
position: 818030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:818210:-1
position: 818210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:817623-817724:-1:exon

position:817623:-1
position: 817623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:817724:-1
position: 817724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:816198-817337:-1:exon

position:817337:-1
position: 817337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ARL13A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: ARL13A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ADP-ribosylation factor-like protein 13A
translation: AAGPLCHLSPLSPPAALAAEVLPEAQPGRSRLRLERLEVTLLELPGAPRCRGAWSGRYREAHGLLFVLDSAEPARLEEARKVLSRVLSHPEASGKPLLLLANKQDAAGALLPCELPERLRLERLVNESRSPCRIEPCVAGRVPPVSPARATLQGLRWLLRAAAAAAPPEPGPGPPHPGAARRDRPRPAEDAREGAGKSGEPRPVRPVCRLLPPEESTKGPRRRKRKVKVKVKKKGSGQPSPAAESEGPGAGAAGGLLLPNRVGQEEPMPTPRPAQGMKKKKKKKIKNKIKSREPSLEQQREEISSTFDLYRRAMLALKMRQQQRKQPSAIAP
SIO_010081: ARL13A
subclass of: SO_0000673
so part of: ARL13A
location: complement(join(817261..817337,817623..817724,818030..818210,818409..818502,818577..818719,818791..818896,819635..>819930))
location: region:817261-819930:-1
so has part: feature:819635-819930:-1:exon
so has part: feature:818791-818896:-1:exon
so has part: feature:818577-818719:-1:exon
so has part: feature:818409-818502:-1:exon
so has part: feature:818030-818210:-1:exon
so has part: feature:817623-817724:-1:exon
so has part: feature:817261-817337:-1:exon

XP_041572215.1
type: Protein
SIO_000068: ncbiprotein

position:817261:-1
position: 817261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:819635-819930:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:818791-818896:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:818577-818719:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:818409-818502:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:818030-818210:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:817623-817724:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:817261-817337:-1:exon

XKRX
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: XKRX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 823484..835573
location: region:823484-835573:1
so has part: feature:823484-835573:1:exon
subclass of: SO_0000010

100232631
type: Gene
SIO_000068: ncbigene

position:823484:1
position: 823484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:835573:1
position: 835573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:823484-835573:1:exon

XKRX
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: XKRX
product: XK related X-linked
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 1 long SRA read, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_041716127.1
SIO_010081: XKRX
subclass of: SO_0000673
so part of: XKRX
location: join(823484..823779,829671..830025,832543..832802,834235..835573)
location: region:823484-835573:1
so has part: feature:823484-823779:1:exon
so has part: feature:829671-830025:1:exon
so has part: feature:832543-832802:1:exon
so has part: feature:834235-835573:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:823484-823779:1:exon

position:823779:1
position: 823779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:829671-830025:1:exon

position:829671:1
position: 829671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:830025:1
position: 830025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:832543-832802:1:exon

position:832543:1
position: 832543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:832802:1
position: 832802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:834235-835573:1:exon

position:834235:1
position: 834235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

XKRX
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: XKRX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: XK-related protein 2
translation: MDGPSGGCPPAAAPSRARLPLGIVFSTALFCGEGAAAAVLCLSYGHSDDRFWLALTVFFVLCPSVLVQLTLIFVHRDLSRDRPLVLLMHLLQLGPVIRCVEALVVYCWSGREEEPYVTITRKRRLRKGFEVEMEQEVGHSERRLATHRNAFKRMAVIQAFLGSTPQLTLQLYISVLEKYVPVARAVLMAVCLVSVTYGALVCNILAIQVKYDDYKVQLRPLAFLCIVLWRSLEISTRIAVLVLFSTVFKHWIIPIALANLLVVFFLPWVQFWRSGSRLPDNVEKNFSRLGTVVVLCAFTLLYSSINMFCWSAVQLKLADRDLIDKSQNWGRLAVYYVARLAENTALVILWYFFKTDVYENVCTALLVLQLLLGYCLGIYFMLLFFQYLHPCRQLFHHNVADFLHCVCCRRRPPGTPLCLQAPLEPGVRHSIV
SIO_010081: XKRX
subclass of: SO_0000673
so part of: XKRX
location: join(829733..830025,832543..832802,834235..834980)
location: region:829733-834980:1
so has part: feature:829733-830025:1:exon
so has part: feature:832543-832802:1:exon
so has part: feature:834235-834980:1:exon

XP_041572061.1
type: Protein
SIO_000068: ncbiprotein

position:829733:1
position: 829733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:834980:1
position: 834980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:829733-830025:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:832543-832802:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:834235-834980:1:exon

NOX1
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: NOX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 835674..841301
location: region:835674-841301:1
so has part: feature:835674-841301:1:exon
subclass of: SO_0000010

100229711
type: Gene
SIO_000068: ncbigene

position:835674:1
position: 835674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:841301:1
position: 841301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:835674-841301:1:exon

NOX1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: NOX1
product: NADPH oxidase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_030272390.3
SIO_010081: NOX1
subclass of: SO_0000673
so part of: NOX1
location: join(835674..836646,837635..837730,838118..838228,838306..838390,838466..838608,838684..838865,839061..839199,839289..839381,839546..839772,839852..840014,840100..840246,840453..840577,840755..841301)
location: region:835674-841301:1
so has part: feature:835674-836646:1:exon
so has part: feature:837635-837730:1:exon
so has part: feature:838118-838228:1:exon
so has part: feature:838306-838390:1:exon
so has part: feature:838466-838608:1:exon
so has part: feature:838684-838865:1:exon
so has part: feature:839061-839199:1:exon
so has part: feature:839289-839381:1:exon
so has part: feature:839546-839772:1:exon
so has part: feature:839852-840014:1:exon
so has part: feature:840100-840246:1:exon
so has part: feature:840453-840577:1:exon
so has part: feature:840755-841301:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:835674-836646:1:exon

position:836646:1
position: 836646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:837635-837730:1:exon

position:837635:1
position: 837635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:837730:1
position: 837730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:838118-838228:1:exon

position:838118:1
position: 838118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:838228:1
position: 838228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:838306-838390:1:exon

position:838306:1
position: 838306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:838390:1
position: 838390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:838466-838608:1:exon

position:838466:1
position: 838466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:838608:1
position: 838608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:838684-838865:1:exon

position:838684:1
position: 838684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:838865:1
position: 838865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:839061-839199:1:exon

position:839061:1
position: 839061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:839199:1
position: 839199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:839289-839381:1:exon

position:839289:1
position: 839289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:839381:1
position: 839381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:839546-839772:1:exon

position:839546:1
position: 839546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:839772:1
position: 839772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:839852-840014:1:exon

position:839852:1
position: 839852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:840014:1
position: 840014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:840100-840246:1:exon

position:840100:1
position: 840100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:840246:1
position: 840246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:840453-840577:1:exon

position:840453:1
position: 840453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:840577:1
position: 840577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:840755-841301:1:exon

position:840755:1
position: 840755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NOX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: NOX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NADPH oxidase 1
translation: MGSCLVNHWVSTTILAAWLGINIFLFTYYFLFFDRDERYFYTRAILGSSLAWARASAKCLNFNSMLILLPVCRNLLSFLRGTCSCCRRTLRKQLDHNLTFHKLVAYALALLTAVHTIAHLFNLERYNQSQQATDGSLPAVLSKVHLQGSKWLNPIHSNQTTVEYVAFTTIPGLTGVIITLALILMVTSSTEFIRRNYFELFWYTHHLFLVYFAGLVIHGIAGLVRGQTEQSMAEVHPYHCAEYLTQRGQNCTHSCCKDPEFGSIPAESWKWVLAPIVLYVFERILRVWRAQQKVLVTKVVMHPARVLELQMQKKGFCMEVGQYIFINCPTISSLEWHPFTLTSAPEEDFFSIHVRAAGDWTERLINTFQLETPRVKVDGPFGTASEDVFQYEVAMLVGAGIGVTPFASILKSIWYKFQQADQTLKTKKIYFYWLCRDTGAFAWFNDLLASLEQKMAESGKADFLTYRLFLTGWDTNIANNVALRFDTATDTVTGLRHKTIFGRPMWNTEFAAVAAAHPRSVVGVFLCGPEALAKSLQKSCHQHSSLDPRKVKFYFNKENF
SIO_010081: NOX1
subclass of: SO_0000673
so part of: NOX1
location: join(836602..836646,837635..837730,838118..838228,838306..838390,838466..838608,838684..838865,839061..839199,839289..839381,839546..839772,839852..840014,840100..840246,840453..840577,840755..840881)
location: region:836602-840881:1
so has part: feature:836602-836646:1:exon
so has part: feature:837635-837730:1:exon
so has part: feature:838118-838228:1:exon
so has part: feature:838306-838390:1:exon
so has part: feature:838466-838608:1:exon
so has part: feature:838684-838865:1:exon
so has part: feature:839061-839199:1:exon
so has part: feature:839289-839381:1:exon
so has part: feature:839546-839772:1:exon
so has part: feature:839852-840014:1:exon
so has part: feature:840100-840246:1:exon
so has part: feature:840453-840577:1:exon
so has part: feature:840755-840881:1:exon

XP_030128250.3
type: Protein
SIO_000068: ncbiprotein

position:836602:1
position: 836602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:840881:1
position: 840881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:836602-836646:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:837635-837730:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:838118-838228:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:838306-838390:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:838466-838608:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:838684-838865:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:839061-839199:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:839289-839381:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:839546-839772:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:839852-840014:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:840100-840246:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:840453-840577:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:840755-840881:1:exon

CSTF2
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: CSTF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(841824..848874)
location: region:841824-848874:-1
so has part: feature:841824-848874:-1:exon
subclass of: SO_0000010

100232693
type: Gene
SIO_000068: ncbigene

position:841824:-1
position: 841824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:848874:-1
position: 848874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:841824-848874:-1:exon

CSTF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: CSTF2
product: cleavage stimulation factor subunit 2, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 101 samples with support for all annotated introns
transcript id: XM_030272388.3
SIO_010081: CSTF2
subclass of: SO_0000673
so part of: CSTF2
location: complement(join(841824..842036,842159..842284,842426..842551,842910..843187,846218..846341,846459..846614,846710..846829,846937..847073,847556..847725,848526..848604,848733..848874))
location: region:841824-848874:-1
so has part: feature:848733-848874:-1:exon
so has part: feature:848526-848604:-1:exon
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so has part: feature:846937-847073:-1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:848733-848874:-1:exon

position:848733:-1
position: 848733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:848526-848604:-1:exon

position:848526:-1
position: 848526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:848604:-1
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reference: sequence
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urn:…
SIO_000300: 3
SIO_000628: feature:847556-847725:-1:exon

position:847556:-1
position: 847556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:847725:-1
position: 847725
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 4
SIO_000628: feature:846937-847073:-1:exon

position:846937:-1
position: 846937
reference: sequence
type: ReverseStrandPosition
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reference: sequence
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urn:…
SIO_000300: 5
SIO_000628: feature:846710-846829:-1:exon

position:846710:-1
position: 846710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:846829:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:846459-846614:-1:exon

position:846459:-1
position: 846459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:846614:-1
position: 846614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:846218-846341:-1:exon

position:846218:-1
position: 846218
reference: sequence
type: ReverseStrandPosition
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position:846341:-1
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reference: sequence
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urn:…
SIO_000300: 8
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position:842910:-1
position: 842910
reference: sequence
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position:843187:-1
position: 843187
reference: sequence
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urn:…
SIO_000300: 9
SIO_000628: feature:842426-842551:-1:exon

position:842426:-1
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reference: sequence
type: ReverseStrandPosition
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position:842551:-1
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reference: sequence
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urn:…
SIO_000300: 10
SIO_000628: feature:842159-842284:-1:exon

position:842159:-1
position: 842159
reference: sequence
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position:842284:-1
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reference: sequence
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urn:…
SIO_000300: 11
SIO_000628: feature:841824-842036:-1:exon

position:842036:-1
position: 842036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CSTF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: CSTF2
product: cleavage stimulation factor subunit 2, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 93 samples with support for all annotated introns
transcript id: XM_012572997.4
SIO_010081: CSTF2
subclass of: SO_0000673
so part of: CSTF2
location: complement(join(841824..842036,842159..842284,842426..842551,842910..843187,843485..843636,844001..844142,846218..846341,846459..846614,846710..846829,846937..847073,847556..847725,848526..848604,848733..848874))
location: region:841824-848874:-1
so has part: feature:848733-848874:-1:exon
so has part: feature:848526-848604:-1:exon
so has part: feature:847556-847725:-1:exon
so has part: feature:846937-847073:-1:exon
so has part: feature:846710-846829:-1:exon
so has part: feature:846459-846614:-1:exon
so has part: feature:846218-846341:-1:exon
so has part: feature:844001-844142:-1:exon
so has part: feature:843485-843636:-1:exon
so has part: feature:842910-843187:-1:exon
so has part: feature:842426-842551:-1:exon
so has part: feature:842159-842284:-1:exon
so has part: feature:841824-842036:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:848733-848874:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:848526-848604:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:847556-847725:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:846937-847073:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:846710-846829:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:846459-846614:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:846218-846341:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:844001-844142:-1:exon

position:844001:-1
position: 844001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:844142:-1
position: 844142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:843485-843636:-1:exon

position:843485:-1
position: 843485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:843636:-1
position: 843636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:842910-843187:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:842426-842551:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:842159-842284:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:841824-842036:-1:exon

CSTF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: CSTF2
product: cleavage stimulation factor subunit 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 ESTs, 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 106 samples with support for all annotated introns
transcript id: XM_012572996.4
SIO_010081: CSTF2
subclass of: SO_0000673
so part of: CSTF2
location: complement(join(841824..842036,842159..842284,842426..842551,842910..843187,843485..843636,844001..844142,844751..844810,846218..846341,846459..846614,846710..846829,846937..847073,847556..847725,848526..848604,848733..848874))
location: region:841824-848874:-1
so has part: feature:848733-848874:-1:exon
so has part: feature:848526-848604:-1:exon
so has part: feature:847556-847725:-1:exon
so has part: feature:846937-847073:-1:exon
so has part: feature:846710-846829:-1:exon
so has part: feature:846459-846614:-1:exon
so has part: feature:846218-846341:-1:exon
so has part: feature:844751-844810:-1:exon
so has part: feature:844001-844142:-1:exon
so has part: feature:843485-843636:-1:exon
so has part: feature:842910-843187:-1:exon
so has part: feature:842426-842551:-1:exon
so has part: feature:842159-842284:-1:exon
so has part: feature:841824-842036:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:848733-848874:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:848526-848604:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:847556-847725:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:846937-847073:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:846710-846829:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:846459-846614:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:846218-846341:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:844751-844810:-1:exon

position:844751:-1
position: 844751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:844810:-1
position: 844810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:844001-844142:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:843485-843636:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:842910-843187:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:842426-842551:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:842159-842284:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:841824-842036:-1:exon

CSTF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: CSTF2
product: cleavage stimulation factor subunit 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_030272387.3
SIO_010081: CSTF2
subclass of: SO_0000673
so part of: CSTF2
location: complement(join(841824..842036,842159..842284,842426..842551,842910..843187,843485..843636,844001..844142,845858..845920,846218..846341,846459..846614,846710..846829,846937..847073,847556..847725,848526..848604,848733..848874))
location: region:841824-848874:-1
so has part: feature:848733-848874:-1:exon
so has part: feature:848526-848604:-1:exon
so has part: feature:847556-847725:-1:exon
so has part: feature:846937-847073:-1:exon
so has part: feature:846710-846829:-1:exon
so has part: feature:846459-846614:-1:exon
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so has part: feature:844001-844142:-1:exon
so has part: feature:843485-843636:-1:exon
so has part: feature:842910-843187:-1:exon
so has part: feature:842426-842551:-1:exon
so has part: feature:842159-842284:-1:exon
so has part: feature:841824-842036:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:848733-848874:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:848526-848604:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:847556-847725:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:846937-847073:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:846710-846829:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:846459-846614:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:846218-846341:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:845858-845920:-1:exon

position:845858:-1
position: 845858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:845920:-1
position: 845920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:844001-844142:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:843485-843636:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:842910-843187:-1:exon

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SIO_000300: 12
SIO_000628: feature:842426-842551:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:842159-842284:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:841824-842036:-1:exon

CSTF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: CSTF2
product: cleavage stimulation factor subunit 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_012572998.4
SIO_010081: CSTF2
subclass of: SO_0000673
so part of: CSTF2
location: complement(join(841824..842036,842159..842284,842426..842551,842910..843187,843485..843636,844001..844142,844751..844810,845858..845920,846218..846341,846459..846614,846710..846829,846937..847073,847556..847725,848526..848604,848733..848874))
location: region:841824-848874:-1
so has part: feature:848733-848874:-1:exon
so has part: feature:848526-848604:-1:exon
so has part: feature:847556-847725:-1:exon
so has part: feature:846937-847073:-1:exon
so has part: feature:846710-846829:-1:exon
so has part: feature:846459-846614:-1:exon
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so has part: feature:844751-844810:-1:exon
so has part: feature:844001-844142:-1:exon
so has part: feature:843485-843636:-1:exon
so has part: feature:842910-843187:-1:exon
so has part: feature:842426-842551:-1:exon
so has part: feature:842159-842284:-1:exon
so has part: feature:841824-842036:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:848733-848874:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:848526-848604:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:847556-847725:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:846937-847073:-1:exon

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SIO_000300: 5
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SIO_000300: 6
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SIO_000300: 7
SIO_000628: feature:846218-846341:-1:exon

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SIO_000300: 8
SIO_000628: feature:845858-845920:-1:exon

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SIO_000300: 9
SIO_000628: feature:844751-844810:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:844001-844142:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:843485-843636:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:842910-843187:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:842426-842551:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:842159-842284:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:841824-842036:-1:exon

CSTF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: CSTF2
product: cleavage stimulation factor subunit 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_041716125.1
SIO_010081: CSTF2
subclass of: SO_0000673
so part of: CSTF2
location: complement(join(841824..842036,842159..842284,842426..842551,842910..843187,843485..843636,844001..844142,845858..846341,846459..846614,846710..846829,846937..847073,847556..847725,848526..848604,848733..848874))
location: region:841824-848874:-1
so has part: feature:848733-848874:-1:exon
so has part: feature:848526-848604:-1:exon
so has part: feature:847556-847725:-1:exon
so has part: feature:846937-847073:-1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:848733-848874:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:848526-848604:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:847556-847725:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:846937-847073:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:846710-846829:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:846459-846614:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:845858-846341:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:844001-844142:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:843485-843636:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:842910-843187:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:842426-842551:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:842159-842284:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:841824-842036:-1:exon

CSTF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: CSTF2
product: cleavage stimulation factor subunit 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_041716124.1
SIO_010081: CSTF2
subclass of: SO_0000673
so part of: CSTF2
location: complement(join(841824..842036,842159..842284,842426..842551,842910..843187,843485..843636,844001..844142,844751..844810,845858..846341,846459..846614,846710..846829,846937..847073,847556..847725,848526..848604,848733..848874))
location: region:841824-848874:-1
so has part: feature:848733-848874:-1:exon
so has part: feature:848526-848604:-1:exon
so has part: feature:847556-847725:-1:exon
so has part: feature:846937-847073:-1:exon
so has part: feature:846710-846829:-1:exon
so has part: feature:846459-846614:-1:exon
so has part: feature:845858-846341:-1:exon
so has part: feature:844751-844810:-1:exon
so has part: feature:844001-844142:-1:exon
so has part: feature:843485-843636:-1:exon
so has part: feature:842910-843187:-1:exon
so has part: feature:842426-842551:-1:exon
so has part: feature:842159-842284:-1:exon
so has part: feature:841824-842036:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:848733-848874:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:848526-848604:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:847556-847725:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:846937-847073:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:846710-846829:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:846459-846614:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:845858-846341:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:844751-844810:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:844001-844142:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:843485-843636:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:842910-843187:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:842426-842551:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:842159-842284:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:841824-842036:-1:exon

CSTF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: CSTF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cleavage stimulation factor subunit 2 isoform X7
translation: MAGLSVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGTGAPIIESPYGDPVNPEDAPESISRAVASLPPEQMFELMKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMRIVDPEIALKILHRQTSVPPLIPGNQQAVPGPGPGPGPGPGPGPNAQLNPQNTPSSQPQPMGGMHVNGAPPLMQPPMQGGVPAPGQMAAPVQGPGPGPMAPGVGRDPRGLEPRGLEPRGLEPRVLEARALEARGLEPRVLEPRVLEARAMEARGLEPRGLEPRGPGPNPRGPMPGGIQGPGPLNMGASGPQGPRQVPNMAGAGMQGGGIPGAGVQGAGQPGGFSPGQSQVTPQDHEKAALIMQVLQLTADQIAMLPPEQRQSILILKEQIQKSTGAP
SIO_010081: CSTF2
subclass of: SO_0000673
so part of: CSTF2
location: complement(join(842162..842284,842426..842551,842910..843187,846218..846341,846459..846614,846710..846829,846937..847073,847556..847725,848526..848604,848733..848790))
location: region:842162-848790:-1
so has part: feature:848733-848790:-1:exon
so has part: feature:848526-848604:-1:exon
so has part: feature:847556-847725:-1:exon
so has part: feature:846937-847073:-1:exon
so has part: feature:846710-846829:-1:exon
so has part: feature:846459-846614:-1:exon
so has part: feature:846218-846341:-1:exon
so has part: feature:842910-843187:-1:exon
so has part: feature:842426-842551:-1:exon
so has part: feature:842162-842284:-1:exon

XP_030128248.1
type: Protein
SIO_000068: ncbiprotein

position:842162:-1
position: 842162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:848790:-1
position: 848790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:848733-848790:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:848526-848604:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:847556-847725:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:846937-847073:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:846710-846829:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:846459-846614:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:846218-846341:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:842910-843187:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:842426-842551:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:842162-842284:-1:exon

CSTF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: CSTF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cleavage stimulation factor subunit 2 isoform X6
translation: MAGLSVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGTGAPIIESPYGDPVNPEDAPESISRAVASLPPEQMFELMKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMRIVDPEIALKILHRQTSVPPLIPGNQQAVPGPGPGPGPGPGPGPNAQLNPQNTPSSQPQPMGGMHVNGAPPLMQPPMQGGVPAPGQMAAPVQGPGPGPMAPGVPMPDPRAPMQRGPLPASGPPPRGLLGDAPNDPRGGTLLSVTGEVEPRGYLGPPHQGAPMHHMPGHDSRGPPHEMRGGPMGEPRPLMGEPRGPLMDARVGRDPRGLEPRGLEPRGLEPRVLEARALEARGLEPRVLEPRVLEARAMEARGLEPRGLEPRGPGPNPRGPMPGGIQGPGPLNMGASGPQGPRQVPNMAGAGMQGGGIPGAGVQGAGQPGGFSPGQSQVTPQDHEKAALIMQVLQLTADQIAMLPPEQRQSILILKEQIQKSTGAP
SIO_010081: CSTF2
subclass of: SO_0000673
so part of: CSTF2
location: complement(join(842162..842284,842426..842551,842910..843187,843485..843636,844001..844142,846218..846341,846459..846614,846710..846829,846937..847073,847556..847725,848526..848604,848733..848790))
location: region:842162-848790:-1
so has part: feature:848733-848790:-1:exon
so has part: feature:848526-848604:-1:exon
so has part: feature:847556-847725:-1:exon
so has part: feature:846937-847073:-1:exon
so has part: feature:846710-846829:-1:exon
so has part: feature:846459-846614:-1:exon
so has part: feature:846218-846341:-1:exon
so has part: feature:844001-844142:-1:exon
so has part: feature:843485-843636:-1:exon
so has part: feature:842910-843187:-1:exon
so has part: feature:842426-842551:-1:exon
so has part: feature:842162-842284:-1:exon

XP_012428451.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:848733-848790:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:848526-848604:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:847556-847725:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:846937-847073:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:846710-846829:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:846459-846614:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:846218-846341:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:844001-844142:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:843485-843636:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:842910-843187:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:842426-842551:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:842162-842284:-1:exon

CSTF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: CSTF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cleavage stimulation factor subunit 2 isoform X5
translation: MAGLSVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGTGAPIIESPYGDPVNPEDAPESISRAVASLPPEQMFELMKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMRIVDPEIALKILHRQTSVPPLIPGNQQAVPGPGPGPGPGPGPGPNAQLNPQNTPSSQPQPMGGMHVNGAPPLMQPPMQGGVPAPGQMAAPVQGPGPGPMAPGGNLQLSPVGPARPASIERVQVPMPDPRAPMQRGPLPASGPPPRGLLGDAPNDPRGGTLLSVTGEVEPRGYLGPPHQGAPMHHMPGHDSRGPPHEMRGGPMGEPRPLMGEPRGPLMDARVGRDPRGLEPRGLEPRGLEPRVLEARALEARGLEPRVLEPRVLEARAMEARGLEPRGLEPRGPGPNPRGPMPGGIQGPGPLNMGASGPQGPRQVPNMAGAGMQGGGIPGAGVQGAGQPGGFSPGQSQVTPQDHEKAALIMQVLQLTADQIAMLPPEQRQSILILKEQIQKSTGAP
SIO_010081: CSTF2
subclass of: SO_0000673
so part of: CSTF2
location: complement(join(842162..842284,842426..842551,842910..843187,843485..843636,844001..844142,844751..844810,846218..846341,846459..846614,846710..846829,846937..847073,847556..847725,848526..848604,848733..848790))
location: region:842162-848790:-1
so has part: feature:848733-848790:-1:exon
so has part: feature:848526-848604:-1:exon
so has part: feature:847556-847725:-1:exon
so has part: feature:846937-847073:-1:exon
so has part: feature:846710-846829:-1:exon
so has part: feature:846459-846614:-1:exon
so has part: feature:846218-846341:-1:exon
so has part: feature:844751-844810:-1:exon
so has part: feature:844001-844142:-1:exon
so has part: feature:843485-843636:-1:exon
so has part: feature:842910-843187:-1:exon
so has part: feature:842426-842551:-1:exon
so has part: feature:842162-842284:-1:exon

XP_012428450.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:848733-848790:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:848526-848604:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:847556-847725:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:846937-847073:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:846710-846829:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:846459-846614:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:846218-846341:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:844751-844810:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:844001-844142:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:843485-843636:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:842910-843187:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:842426-842551:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:842162-842284:-1:exon

CSTF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: CSTF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cleavage stimulation factor subunit 2 isoform X4
translation: MAGLSVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGTGAPIIESPYGDPVNPEDAPESISRAVASLPPEQMFELMKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMRIVDPEIALKILHRQTSVPPLIPGNQQAVPGPGPGPGPGPGPGPNAQLNPQNTPSSQPQPMGGMHVNGAPPLMQPPMQGGVPAPGQMAAPVQGPGPGPMAPGGGMQPQVGMPGAGPVPLERGQVPMPDPRAPMQRGPLPASGPPPRGLLGDAPNDPRGGTLLSVTGEVEPRGYLGPPHQGAPMHHMPGHDSRGPPHEMRGGPMGEPRPLMGEPRGPLMDARVGRDPRGLEPRGLEPRGLEPRVLEARALEARGLEPRVLEPRVLEARAMEARGLEPRGLEPRGPGPNPRGPMPGGIQGPGPLNMGASGPQGPRQVPNMAGAGMQGGGIPGAGVQGAGQPGGFSPGQSQVTPQDHEKAALIMQVLQLTADQIAMLPPEQRQSILILKEQIQKSTGAP
SIO_010081: CSTF2
subclass of: SO_0000673
so part of: CSTF2
location: complement(join(842162..842284,842426..842551,842910..843187,843485..843636,844001..844142,845858..845920,846218..846341,846459..846614,846710..846829,846937..847073,847556..847725,848526..848604,848733..848790))
location: region:842162-848790:-1
so has part: feature:848733-848790:-1:exon
so has part: feature:848526-848604:-1:exon
so has part: feature:847556-847725:-1:exon
so has part: feature:846937-847073:-1:exon
so has part: feature:846710-846829:-1:exon
so has part: feature:846459-846614:-1:exon
so has part: feature:846218-846341:-1:exon
so has part: feature:845858-845920:-1:exon
so has part: feature:844001-844142:-1:exon
so has part: feature:843485-843636:-1:exon
so has part: feature:842910-843187:-1:exon
so has part: feature:842426-842551:-1:exon
so has part: feature:842162-842284:-1:exon

XP_030128247.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:848733-848790:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:848526-848604:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:847556-847725:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:846937-847073:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:846710-846829:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:846459-846614:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:846218-846341:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:845858-845920:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:844001-844142:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:843485-843636:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:842910-843187:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:842426-842551:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:842162-842284:-1:exon

CSTF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: CSTF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cleavage stimulation factor subunit 2 isoform X3
translation: MAGLSVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGTGAPIIESPYGDPVNPEDAPESISRAVASLPPEQMFELMKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMRIVDPEIALKILHRQTSVPPLIPGNQQAVPGPGPGPGPGPGPGPNAQLNPQNTPSSQPQPMGGMHVNGAPPLMQPPMQGGVPAPGQMAAPVQGPGPGPMAPGGGMQPQVGMPGAGPVPLERGQGNLQLSPVGPARPASIERVQVPMPDPRAPMQRGPLPASGPPPRGLLGDAPNDPRGGTLLSVTGEVEPRGYLGPPHQGAPMHHMPGHDSRGPPHEMRGGPMGEPRPLMGEPRGPLMDARVGRDPRGLEPRGLEPRGLEPRVLEARALEARGLEPRVLEPRVLEARAMEARGLEPRGLEPRGPGPNPRGPMPGGIQGPGPLNMGASGPQGPRQVPNMAGAGMQGGGIPGAGVQGAGQPGGFSPGQSQVTPQDHEKAALIMQVLQLTADQIAMLPPEQRQSILILKEQIQKSTGAP
SIO_010081: CSTF2
subclass of: SO_0000673
so part of: CSTF2
location: complement(join(842162..842284,842426..842551,842910..843187,843485..843636,844001..844142,844751..844810,845858..845920,846218..846341,846459..846614,846710..846829,846937..847073,847556..847725,848526..848604,848733..848790))
location: region:842162-848790:-1
so has part: feature:848733-848790:-1:exon
so has part: feature:848526-848604:-1:exon
so has part: feature:847556-847725:-1:exon
so has part: feature:846937-847073:-1:exon
so has part: feature:846710-846829:-1:exon
so has part: feature:846459-846614:-1:exon
so has part: feature:846218-846341:-1:exon
so has part: feature:845858-845920:-1:exon
so has part: feature:844751-844810:-1:exon
so has part: feature:844001-844142:-1:exon
so has part: feature:843485-843636:-1:exon
so has part: feature:842910-843187:-1:exon
so has part: feature:842426-842551:-1:exon
so has part: feature:842162-842284:-1:exon

XP_012428452.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:848733-848790:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:848526-848604:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:847556-847725:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:846937-847073:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:846710-846829:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:846459-846614:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:846218-846341:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:845858-845920:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:844751-844810:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:844001-844142:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:843485-843636:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:842910-843187:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:842426-842551:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:842162-842284:-1:exon

CSTF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: CSTF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cleavage stimulation factor subunit 2 isoform X2
translation: MAGLSVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGTGAPIIESPYGDPVNPEDAPESISRAVASLPPEQMFELMKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMRIVDPEIALKILHRQTSVPPLIPGNQQAVPGPGPGPGPGPGPGPNAQLNPQNTPSSQPQPMGGMHVNGAPPLMQPPMQGGVPAPGQMAAPVQGPGPGPMAPGGEFGLSCPTCEHTGPADTPSAFPLTTARARVVLYCTLWLCCCQRWAAELDCPSGGANTKGINLQMLPEELGARRYLGPKDQVSYQGWLRRGLISACPLSGGMQPQVGMPGAGPVPLERGQVPMPDPRAPMQRGPLPASGPPPRGLLGDAPNDPRGGTLLSVTGEVEPRGYLGPPHQGAPMHHMPGHDSRGPPHEMRGGPMGEPRPLMGEPRGPLMDARVGRDPRGLEPRGLEPRGLEPRVLEARALEARGLEPRVLEPRVLEARAMEARGLEPRGLEPRGPGPNPRGPMPGGIQGPGPLNMGASGPQGPRQVPNMAGAGMQGGGIPGAGVQGAGQPGGFSPGQSQVTPQDHEKAALIMQVLQLTADQIAMLPPEQRQSILILKEQIQKSTGAP
SIO_010081: CSTF2
subclass of: SO_0000673
so part of: CSTF2
location: complement(join(842162..842284,842426..842551,842910..843187,843485..843636,844001..844142,845858..846341,846459..846614,846710..846829,846937..847073,847556..847725,848526..848604,848733..848790))
location: region:842162-848790:-1
so has part: feature:848733-848790:-1:exon
so has part: feature:848526-848604:-1:exon
so has part: feature:847556-847725:-1:exon
so has part: feature:846937-847073:-1:exon
so has part: feature:846710-846829:-1:exon
so has part: feature:846459-846614:-1:exon
so has part: feature:845858-846341:-1:exon
so has part: feature:844001-844142:-1:exon
so has part: feature:843485-843636:-1:exon
so has part: feature:842910-843187:-1:exon
so has part: feature:842426-842551:-1:exon
so has part: feature:842162-842284:-1:exon

XP_041572059.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:848733-848790:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:848526-848604:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:847556-847725:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:846937-847073:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:846710-846829:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:846459-846614:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:845858-846341:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:844001-844142:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:843485-843636:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:842910-843187:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:842426-842551:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:842162-842284:-1:exon

CSTF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: CSTF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cleavage stimulation factor subunit 2 isoform X1
translation: MAGLSVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGTGAPIIESPYGDPVNPEDAPESISRAVASLPPEQMFELMKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMRIVDPEIALKILHRQTSVPPLIPGNQQAVPGPGPGPGPGPGPGPNAQLNPQNTPSSQPQPMGGMHVNGAPPLMQPPMQGGVPAPGQMAAPVQGPGPGPMAPGGEFGLSCPTCEHTGPADTPSAFPLTTARARVVLYCTLWLCCCQRWAAELDCPSGGANTKGINLQMLPEELGARRYLGPKDQVSYQGWLRRGLISACPLSGGMQPQVGMPGAGPVPLERGQGNLQLSPVGPARPASIERVQVPMPDPRAPMQRGPLPASGPPPRGLLGDAPNDPRGGTLLSVTGEVEPRGYLGPPHQGAPMHHMPGHDSRGPPHEMRGGPMGEPRPLMGEPRGPLMDARVGRDPRGLEPRGLEPRGLEPRVLEARALEARGLEPRVLEPRVLEARAMEARGLEPRGLEPRGPGPNPRGPMPGGIQGPGPLNMGASGPQGPRQVPNMAGAGMQGGGIPGAGVQGAGQPGGFSPGQSQVTPQDHEKAALIMQVLQLTADQIAMLPPEQRQSILILKEQIQKSTGAP
SIO_010081: CSTF2
subclass of: SO_0000673
so part of: CSTF2
location: complement(join(842162..842284,842426..842551,842910..843187,843485..843636,844001..844142,844751..844810,845858..846341,846459..846614,846710..846829,846937..847073,847556..847725,848526..848604,848733..848790))
location: region:842162-848790:-1
so has part: feature:848733-848790:-1:exon
so has part: feature:848526-848604:-1:exon
so has part: feature:847556-847725:-1:exon
so has part: feature:846937-847073:-1:exon
so has part: feature:846710-846829:-1:exon
so has part: feature:846459-846614:-1:exon
so has part: feature:845858-846341:-1:exon
so has part: feature:844751-844810:-1:exon
so has part: feature:844001-844142:-1:exon
so has part: feature:843485-843636:-1:exon
so has part: feature:842910-843187:-1:exon
so has part: feature:842426-842551:-1:exon
so has part: feature:842162-842284:-1:exon

XP_041572058.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:848733-848790:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:848526-848604:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:847556-847725:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:846937-847073:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:846710-846829:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:846459-846614:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:845858-846341:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:844751-844810:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:844001-844142:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:843485-843636:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:842910-843187:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:842426-842551:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:842162-842284:-1:exon

TRMT12
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: TRMT12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 848964..852539
location: region:848964-852539:1
so has part: feature:848964-852539:1:exon
subclass of: SO_0000010

100226909
type: Gene
SIO_000068: ncbigene

position:848964:1
position: 848964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:852539:1
position: 852539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:848964-852539:1:exon

TRMT12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: TRMT12
product: tRNA methyltransferase 12 homolog, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 82 samples with support for all annotated introns
transcript id: XM_030272392.3
SIO_010081: TRMT12
subclass of: SO_0000673
so part of: TRMT12
location: join(848964..849202,849519..849666,849740..849929,850450..850600,850671..850780,851397..852539)
location: region:848964-852539:1
so has part: feature:848964-849202:1:exon
so has part: feature:849519-849666:1:exon
so has part: feature:849740-849929:1:exon
so has part: feature:850450-850600:1:exon
so has part: feature:850671-850780:1:exon
so has part: feature:851397-852539:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:848964-849202:1:exon

position:849202:1
position: 849202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:849519-849666:1:exon

position:849519:1
position: 849519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:849666:1
position: 849666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:849740-849929:1:exon

position:849740:1
position: 849740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:849929:1
position: 849929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:850450-850600:1:exon

position:850450:1
position: 850450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:850600:1
position: 850600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:850671-850780:1:exon

position:850671:1
position: 850671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:850780:1
position: 850780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:851397-852539:1:exon

position:851397:1
position: 851397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TRMT12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: TRMT12
product: tRNA methyltransferase 12 homolog, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 77 samples with support for all annotated introns
transcript id: XM_030272391.3
SIO_010081: TRMT12
subclass of: SO_0000673
so part of: TRMT12
location: join(848964..849202,849519..849666,849740..849929,850450..850600,850671..850780,851397..851554,851621..852539)
location: region:848964-852539:1
so has part: feature:848964-849202:1:exon
so has part: feature:849519-849666:1:exon
so has part: feature:849740-849929:1:exon
so has part: feature:850450-850600:1:exon
so has part: feature:850671-850780:1:exon
so has part: feature:851397-851554:1:exon
so has part: feature:851621-852539:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:848964-849202:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:849519-849666:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:849740-849929:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:850450-850600:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:850671-850780:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:851397-851554:1:exon

position:851554:1
position: 851554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:851621-852539:1:exon

position:851621:1
position: 851621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TRMT12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: TRMT12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA wybutosine-synthesizing protein 2 homolog isoform X1
translation: MAAAELPALATEVPALATERRFAQRLRECLEAERLLDGRYRLQPLPGGRVAVPVLEEKLSQLCLPAEMPCELLRIQDAVPSRAARRRPPARRLLQELRRLLPAGCPPELERDLPHAWQRHGDLLLLSEECFSGPAWERLGPELWETVASALGARRVARRGRVMPDGMRTPSVTLLLGQHGWVEHVDNGIRYTFDVTKCMFSPGNITEKLRVASLPCSGEVVVDLYAGIGYFTLPFLVHAGAAFVHACEWNSHAVEALHRSLVLNGVRERCRIHRGDSRQVSAAPGTGALPAGIPSPPLSSQLQLRDVADRVSLGLLPSSEEGWPVACRVLKKDTGGVLHIHQNVEARPAHGAVLLPERGSAEAASSAGEAPCPPEHGGQEAPGARLRPEWQRWAAATAARIQGLLAELHGRPWRCSVLHIEAVKSYAPHVHHLVLDLKCQPVPPV
SIO_010081: TRMT12
subclass of: SO_0000673
so part of: TRMT12
location: join(849123..849202,849519..849666,849740..849929,850450..850600,850671..850780,851397..852055)
location: region:849123-852055:1
so has part: feature:849123-849202:1:exon
so has part: feature:849519-849666:1:exon
so has part: feature:849740-849929:1:exon
so has part: feature:850450-850600:1:exon
so has part: feature:850671-850780:1:exon
so has part: feature:851397-852055:1:exon

XP_030128252.3
type: Protein
SIO_000068: ncbiprotein

position:849123:1
position: 849123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:852055:1
position: 852055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:849123-849202:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:849519-849666:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:849740-849929:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:850450-850600:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:850671-850780:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:851397-852055:1:exon

TRMT12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: TRMT12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA wybutosine-synthesizing protein 2 homolog isoform X2
translation: MAAAELPALATEVPALATERRFAQRLRECLEAERLLDGRYRLQPLPGGRVAVPVLEEKLSQLCLPAEMPCELLRIQDAVPSRAARRRPPARRLLQELRRLLPAGCPPELERDLPHAWQRHGDLLLLSEECFSGPAWERLGPELWETVASALGARRVARRGRVMPDGMRTPSVTLLLGQHGWVEHVDNGIRYTFDVTKCMFSPGNITEKLRVASLPCSGEVVVDLYAGIGYFTLPFLVHAGAAFVHACEWNSHAVEALHRSLVLNGVRERCRIHRGDSRQLQLRDVADRVSLGLLPSSEEGWPVACRVLKKDTGGVLHIHQNVEARPAHGAVLLPERGSAEAASSAGEAPCPPEHGGQEAPGARLRPEWQRWAAATAARIQGLLAELHGRPWRCSVLHIEAVKSYAPHVHHLVLDLKCQPVPPV
SIO_010081: TRMT12
subclass of: SO_0000673
so part of: TRMT12
location: join(849123..849202,849519..849666,849740..849929,850450..850600,850671..850780,851397..851554,851621..852055)
location: region:849123-852055:1
so has part: feature:849123-849202:1:exon
so has part: feature:849519-849666:1:exon
so has part: feature:849740-849929:1:exon
so has part: feature:850450-850600:1:exon
so has part: feature:850671-850780:1:exon
so has part: feature:851397-851554:1:exon
so has part: feature:851621-852055:1:exon

XP_030128251.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:849123-849202:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:849519-849666:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:849740-849929:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:850450-850600:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:850671-850780:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:851397-851554:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:851621-852055:1:exon

SYTL4
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: SYTL4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 853356..860615
location: region:853356-860615:1
so has part: feature:853356-860615:1:exon
subclass of: SO_0000010

100224015
type: Gene
SIO_000068: ncbigene

position:853356:1
position: 853356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:860615:1
position: 860615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:853356-860615:1:exon

SYTL4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: SYTL4
product: synaptotagmin like 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 2 long SRA reads, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 52 samples with support for all annotated introns
transcript id: XM_041716126.1
SIO_010081: SYTL4
subclass of: SO_0000673
so part of: SYTL4
location: join(853356..853430,854266..854412,854531..854746,855266..855375,855522..855636,855795..855902,856154..856268,856375..856465,856633..856736,856833..856919,857256..857434,857622..857724,858566..858727,859147..859252,859700..859799,860039..860247,860354..860615)
location: region:853356-860615:1
so has part: feature:853356-853430:1:exon
so has part: feature:854266-854412:1:exon
so has part: feature:854531-854746:1:exon
so has part: feature:855266-855375:1:exon
so has part: feature:855522-855636:1:exon
so has part: feature:855795-855902:1:exon
so has part: feature:856154-856268:1:exon
so has part: feature:856375-856465:1:exon
so has part: feature:856633-856736:1:exon
so has part: feature:856833-856919:1:exon
so has part: feature:857256-857434:1:exon
so has part: feature:857622-857724:1:exon
so has part: feature:858566-858727:1:exon
so has part: feature:859147-859252:1:exon
so has part: feature:859700-859799:1:exon
so has part: feature:860039-860247:1:exon
so has part: feature:860354-860615:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:853356-853430:1:exon

position:853430:1
position: 853430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:854266-854412:1:exon

position:854266:1
position: 854266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:854412:1
position: 854412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:854531-854746:1:exon

position:854531:1
position: 854531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:854746:1
position: 854746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:855266-855375:1:exon

position:855266:1
position: 855266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:855375:1
position: 855375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:855522-855636:1:exon

position:855522:1
position: 855522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:855636:1
position: 855636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:855795-855902:1:exon

position:855795:1
position: 855795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:855902:1
position: 855902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:856154-856268:1:exon

position:856154:1
position: 856154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:856268:1
position: 856268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:856375-856465:1:exon

position:856375:1
position: 856375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:856465:1
position: 856465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:856633-856736:1:exon

position:856633:1
position: 856633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:856736:1
position: 856736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:856833-856919:1:exon

position:856833:1
position: 856833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:856919:1
position: 856919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:857256-857434:1:exon

position:857256:1
position: 857256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:857434:1
position: 857434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:857622-857724:1:exon

position:857622:1
position: 857622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:857724:1
position: 857724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:858566-858727:1:exon

position:858566:1
position: 858566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:858727:1
position: 858727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:859147-859252:1:exon

position:859147:1
position: 859147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:859252:1
position: 859252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:859700-859799:1:exon

position:859700:1
position: 859700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:859799:1
position: 859799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:860039-860247:1:exon

position:860039:1
position: 860039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:860247:1
position: 860247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:860354-860615:1:exon

position:860354:1
position: 860354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SYTL4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: SYTL4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synaptotagmin-like protein 4
translation: MSEAVDLSFLSDVERDLILQVLQRDEELRKAEERRIRRLKNELLEIRRKGAKRGSQRYSERTCARCQQSLGRVSPKANTCRGCNHLVCRDCRSYSPGGSWRCKVCTKEAELKKETGDWFYDQRVNRFANHLGSDMVRLSLRHRPAANKRETVGHTLLQKAQLSEPKSSSAVRQPSPPAPREGSSLFPDASEPRDGKSDTESMENMSLDSYRPGPADVGGRRNSLERAIPGKQVVGPAGPASSSLTLPLRSRNTFSDGRDATVGTRSSALVDEHEMIFKKNPRRVVRPADYTKSVIDLRPEDLVGEGGSLGDRSKSVPGLNTELEEEEEDIDNLVEIHRQRVARGSMRSGTSSSTLGSMVSIYSEAGDFGSVAVTGGISFSLSYEQKTQTLFIHVKECRQLAFGDEGRKRSNPYVKTYLLPDKSRQGKRKTTIKRNTINPLYNELLKYEINKSLLLARTLQFSVWHHDRFGRNTFLGEVEVPLGAWNFESHLEEFLPLHGKAGADVAGLHQYKGELVVSMKYIPSAKHAGAGNGRKGKTGEGGELQVWIKEAKNLTAAKSGGTSDSFVKGYLLPHKNKASKRKTPVVKKTLNPHYNHTFVYNGVSPEELQHICLELTVWDREPLSSNDFLGGVRLGVGTGMSNGQAVDWMDSTGEELNLWQKMCQYPGSWAEGTLQLRSSMAKLRP
SIO_010081: SYTL4
subclass of: SO_0000673
so part of: SYTL4
location: join(854303..854412,854531..854746,855266..855375,855522..855636,855795..855902,856154..856268,856375..856465,856633..856736,856833..856919,857256..857434,857622..857724,858566..858727,859147..859252,859700..859799,860039..860247,860354..860496)
location: region:854303-860496:1
so has part: feature:854303-854412:1:exon
so has part: feature:854531-854746:1:exon
so has part: feature:855266-855375:1:exon
so has part: feature:855522-855636:1:exon
so has part: feature:855795-855902:1:exon
so has part: feature:856154-856268:1:exon
so has part: feature:856375-856465:1:exon
so has part: feature:856633-856736:1:exon
so has part: feature:856833-856919:1:exon
so has part: feature:857256-857434:1:exon
so has part: feature:857622-857724:1:exon
so has part: feature:858566-858727:1:exon
so has part: feature:859147-859252:1:exon
so has part: feature:859700-859799:1:exon
so has part: feature:860039-860247:1:exon
so has part: feature:860354-860496:1:exon

XP_041572060.1
type: Protein
SIO_000068: ncbiprotein

position:854303:1
position: 854303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:860496:1
position: 860496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:854303-854412:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:854531-854746:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:855266-855375:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:855522-855636:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:855795-855902:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:856154-856268:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:856375-856465:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:856633-856736:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:856833-856919:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:857256-857434:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:857622-857724:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:858566-858727:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:859147-859252:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:859700-859799:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:860039-860247:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:860354-860496:1:exon

SRPX2
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: SRPX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(860976..867032)
location: region:860976-867032:-1
so has part: feature:860976-867032:-1:exon
subclass of: SO_0000010

100221089
type: Gene
SIO_000068: ncbigene

position:860976:-1
position: 860976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:867032:-1
position: 867032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:860976-867032:-1:exon

SRPX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: SRPX2
product: sushi repeat containing protein X-linked 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030272395.3
SIO_010081: SRPX2
subclass of: SO_0000673
so part of: SRPX2
location: complement(join(860976..861734,862029..862150,862222..862355,862477..862656,863302..863423,863546..863672,863963..864139,864255..864446,864533..864616,866399..867032))
location: region:860976-867032:-1
so has part: feature:866399-867032:-1:exon
so has part: feature:864533-864616:-1:exon
so has part: feature:864255-864446:-1:exon
so has part: feature:863963-864139:-1:exon
so has part: feature:863546-863672:-1:exon
so has part: feature:863302-863423:-1:exon
so has part: feature:862477-862656:-1:exon
so has part: feature:862222-862355:-1:exon
so has part: feature:862029-862150:-1:exon
so has part: feature:860976-861734:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:866399-867032:-1:exon

position:866399:-1
position: 866399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:864533-864616:-1:exon

position:864533:-1
position: 864533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:864616:-1
position: 864616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:864255-864446:-1:exon

position:864255:-1
position: 864255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:864446:-1
position: 864446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:863963-864139:-1:exon

position:863963:-1
position: 863963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:864139:-1
position: 864139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:863546-863672:-1:exon

position:863546:-1
position: 863546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:863672:-1
position: 863672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:863302-863423:-1:exon

position:863302:-1
position: 863302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:863423:-1
position: 863423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:862477-862656:-1:exon

position:862477:-1
position: 862477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:862656:-1
position: 862656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:862222-862355:-1:exon

position:862222:-1
position: 862222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:862355:-1
position: 862355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:862029-862150:-1:exon

position:862029:-1
position: 862029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:862150:-1
position: 862150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:860976-861734:-1:exon

position:861734:-1
position: 861734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SRPX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: SRPX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sushi repeat-containing protein SRPX2
translation: MAREAAPVLLLVLARLVASTWHEGSGYYLESHTNEVYAEEPPPEPVLDYHRVPQWCATLSIHRGEATCYSPRGSSYRSSLGTRCELSCARGYRLVGPAAVRCLPSRRWSGMAYCRQIRCHVLPAVLRGSYACSAGVQMDSRCDYTCLPGYQLEGDRSRICMEDGRWSGGEPVCVDLEPPKIRCPDSRERIAEPGKLTATVYWDPPRVRDSADGVIKRVMLRGPEPGSEFPEGEHVIRYTAHDQAYNRASCKFSVRVHVRRCPVLKPPQNGYISCTSDGNNYGATCEYLCDGGFELQGTSLRVCQSSQHWTGSQPLCAPMQINTDVHSAASLLDQFHEKRRLLVISAPDPSNRYYKMQISMLQQAACGLDLRHVTTVELVGQPPHEVGRIREHRLSLGIIEELRRFLHLTRSHFNAVLLDKAGTDRERYISPVSPEELFVFIDTYLLSEREAARRAQSGDPCQ
SIO_010081: SRPX2
subclass of: SO_0000673
so part of: SRPX2
location: complement(join(861554..861734,862029..862150,862222..862355,862477..862656,863302..863423,863546..863672,863963..864139,864255..864446,864533..864616,866399..866468))
location: region:861554-866468:-1
so has part: feature:866399-866468:-1:exon
so has part: feature:864533-864616:-1:exon
so has part: feature:864255-864446:-1:exon
so has part: feature:863963-864139:-1:exon
so has part: feature:863546-863672:-1:exon
so has part: feature:863302-863423:-1:exon
so has part: feature:862477-862656:-1:exon
so has part: feature:862222-862355:-1:exon
so has part: feature:862029-862150:-1:exon
so has part: feature:861554-861734:-1:exon

XP_030128255.3
type: Protein
SIO_000068: ncbiprotein

position:861554:-1
position: 861554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:866468:-1
position: 866468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:866399-866468:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:864533-864616:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:864255-864446:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:863963-864139:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:863546-863672:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:863302-863423:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:862477-862656:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:862222-862355:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:862029-862150:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:861554-861734:-1:exon

TSPAN6
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: TSPAN6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 868181..873604
location: region:868181-873604:1
so has part: feature:868181-873604:1:exon
subclass of: SO_0000010

101234209
type: Gene
SIO_000068: ncbigene

position:868181:1
position: 868181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:873604:1
position: 873604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:868181-873604:1:exon

TSPAN6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: TSPAN6
product: tetraspanin 6, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 1 EST, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 103 samples with support for all annotated introns
transcript id: XM_030272396.3
SIO_010081: TSPAN6
subclass of: SO_0000673
so part of: TSPAN6
location: join(868181..868340,868432..868620,869046..869120,869628..869726,870063..870218,870841..870924,872597..872696,872893..873604)
location: region:868181-873604:1
so has part: feature:868181-868340:1:exon
so has part: feature:868432-868620:1:exon
so has part: feature:869046-869120:1:exon
so has part: feature:869628-869726:1:exon
so has part: feature:870063-870218:1:exon
so has part: feature:870841-870924:1:exon
so has part: feature:872597-872696:1:exon
so has part: feature:872893-873604:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:868181-868340:1:exon

position:868340:1
position: 868340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:868432-868620:1:exon

position:868432:1
position: 868432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:868620:1
position: 868620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:869046-869120:1:exon

position:869046:1
position: 869046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:869120:1
position: 869120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:869628-869726:1:exon

position:869628:1
position: 869628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:869726:1
position: 869726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:870063-870218:1:exon

position:870063:1
position: 870063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:870218:1
position: 870218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:870841-870924:1:exon

position:870841:1
position: 870841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:870924:1
position: 870924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:872597-872696:1:exon

position:872597:1
position: 872597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:872696:1
position: 872696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:872893-873604:1:exon

position:872893:1
position: 872893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TSPAN6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: TSPAN6
product: tetraspanin 6, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 93 samples with support for all annotated introns
transcript id: XM_030272397.3
SIO_010081: TSPAN6
subclass of: SO_0000673
so part of: TSPAN6
location: join(868181..868340,868432..868620,869628..869726,870063..870218,870841..870924,872597..872696,872893..873604)
location: region:868181-873604:1
so has part: feature:868181-868340:1:exon
so has part: feature:868432-868620:1:exon
so has part: feature:869628-869726:1:exon
so has part: feature:870063-870218:1:exon
so has part: feature:870841-870924:1:exon
so has part: feature:872597-872696:1:exon
so has part: feature:872893-873604:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:868181-868340:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:868432-868620:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:869628-869726:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:870063-870218:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:870841-870924:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:872597-872696:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:872893-873604:1:exon

TSPAN6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: TSPAN6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetraspanin-6 isoform X1
translation: MASPSRRLQTKPVITCLKSVLLTYTFVFWVSGIVLLAVGIWGRVSLAVYFSLLDEKATNVPFVLVGAGTVVVLLGTFGCFATCRGSTWMLKLYAMLLSLIFLIVLVAAIVGFVFRHEIQTSFESNLELALKDYNVTADQHSKAVDTIQRTLHCCGVQNYSDWERTEYFSQRGIPPSCCKNQNDCSEEDLKDPNKAKLKVFVDGCFFLVTSTMESKMSVVAGISFGIACFQLIGIILSCCLSRYITNNQYEMV
SIO_010081: TSPAN6
subclass of: SO_0000673
so part of: TSPAN6
location: join(868254..868340,868432..868620,869046..869120,869628..869726,870063..870218,870841..870924,872597..872665)
location: region:868254-872665:1
so has part: feature:868254-868340:1:exon
so has part: feature:868432-868620:1:exon
so has part: feature:869046-869120:1:exon
so has part: feature:869628-869726:1:exon
so has part: feature:870063-870218:1:exon
so has part: feature:870841-870924:1:exon
so has part: feature:872597-872665:1:exon

XP_030128256.1
type: Protein
SIO_000068: ncbiprotein

position:868254:1
position: 868254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:872665:1
position: 872665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:868254-868340:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:868432-868620:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:869046-869120:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:869628-869726:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:870063-870218:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:870841-870924:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:872597-872665:1:exon

TSPAN6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: TSPAN6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetraspanin-6 isoform X2
translation: MASPSRRLQTKPVITCLKSVLLTYTFVFWVSGIVLLAVGIWGRVSLAVYFSLLDEKATNVPFVLVGAGTVVVLLGTFGCFATCRGSTWMLKLIQTSFESNLELALKDYNVTADQHSKAVDTIQRTLHCCGVQNYSDWERTEYFSQRGIPPSCCKNQNDCSEEDLKDPNKAKLKVFVDGCFFLVTSTMESKMSVVAGISFGIACFQLIGIILSCCLSRYITNNQYEMV
SIO_010081: TSPAN6
subclass of: SO_0000673
so part of: TSPAN6
location: join(868254..868340,868432..868620,869628..869726,870063..870218,870841..870924,872597..872665)
location: region:868254-872665:1
so has part: feature:868254-868340:1:exon
so has part: feature:868432-868620:1:exon
so has part: feature:869628-869726:1:exon
so has part: feature:870063-870218:1:exon
so has part: feature:870841-870924:1:exon
so has part: feature:872597-872665:1:exon

XP_030128257.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:868254-868340:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:868432-868620:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:869628-869726:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:870063-870218:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:870841-870924:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:872597-872665:1:exon

TNMD
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: TNMD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(875811..884285)
location: region:875811-884285:-1
so has part: feature:875811-884285:-1:exon
subclass of: SO_0000010

100229770
type: Gene
SIO_000068: ncbigene

position:875811:-1
position: 875811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:884285:-1
position: 884285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:875811-884285:-1:exon

TNMD
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: TNMD
product: tenomodulin
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_030272398.3
SIO_010081: TNMD
subclass of: SO_0000673
so part of: TNMD
location: complement(join(875811..876219,876560..876768,877956..878109,879849..879950,880713..880853,883931..884065,884198..884285))
location: region:875811-884285:-1
so has part: feature:884198-884285:-1:exon
so has part: feature:883931-884065:-1:exon
so has part: feature:880713-880853:-1:exon
so has part: feature:879849-879950:-1:exon
so has part: feature:877956-878109:-1:exon
so has part: feature:876560-876768:-1:exon
so has part: feature:875811-876219:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:884198-884285:-1:exon

position:884198:-1
position: 884198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:883931-884065:-1:exon

position:883931:-1
position: 883931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:884065:-1
position: 884065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:880713-880853:-1:exon

position:880713:-1
position: 880713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:880853:-1
position: 880853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:879849-879950:-1:exon

position:879849:-1
position: 879849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:879950:-1
position: 879950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:877956-878109:-1:exon

position:877956:-1
position: 877956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:878109:-1
position: 878109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:876560-876768:-1:exon

position:876560:-1
position: 876560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:876768:-1
position: 876768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:875811-876219:-1:exon

position:876219:-1
position: 876219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TNMD
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: TNMD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tenomodulin
translation: MGGSARRSPEDCHFLDAEAAKPPKKSCPRYQLCGLLFSVLLLSLILIFFGVKYLWNPAPRKVYDMEHTFFSNGEKKKIVMEIDPLARTETFSSGNGSEEILEIHDFKNGITGIFFVGLQKCFIKTQTKVLPETTEAKIPELEGQEITTTYFEQSVVWVPGEKPIQNKEFLKSSKIFDICKNVTIFWIHPTPIAAPELAKLEGAEEEEAELLAASQSWLAGGSEQEQEQEQQQEQQQEQEQERRAGPRRRARQLTEEDLPVNDYSENGLEFHPLWDERGYCCAQCRRANRYCRRVCEPLLGYYPYPYCYQGGRVICRIIMPCNWWIARMLGRV
SIO_010081: TNMD
subclass of: SO_0000673
so part of: TNMD
location: complement(join(876010..876219,876560..876768,877956..878109,879849..879950,880713..880853,883931..884065,884198..884245))
location: region:876010-884245:-1
so has part: feature:884198-884245:-1:exon
so has part: feature:883931-884065:-1:exon
so has part: feature:880713-880853:-1:exon
so has part: feature:879849-879950:-1:exon
so has part: feature:877956-878109:-1:exon
so has part: feature:876560-876768:-1:exon
so has part: feature:876010-876219:-1:exon

XP_030128258.3
type: Protein
SIO_000068: ncbiprotein

position:876010:-1
position: 876010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:884245:-1
position: 884245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:884198-884245:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:883931-884065:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:880713-880853:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:879849-879950:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:877956-878109:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:876560-876768:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:876010-876219:-1:exon

LOC115495201
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC115495201
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 878000..878410
location: region:878000-878410:1
so has part: feature:878000-878410:1:exon
subclass of: SO_0000011

115495201
type: Gene
SIO_000068: ncbigene

position:878000:1
position: 878000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:878410:1
position: 878410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:878000-878410:1:exon

LOC115495201
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC115495201
product: uncharacterized LOC115495201
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_003960333.3
SIO_010081: LOC115495201
subclass of: SO_0000673
so part of: LOC115495201
location: join(878000..878085,878212..878410)
location: region:878000-878410:1
so has part: feature:878000-878085:1:exon
so has part: feature:878212-878410:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:878000-878085:1:exon

position:878085:1
position: 878085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:878212-878410:1:exon

position:878212:1
position: 878212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PCDH19
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: PCDH19
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 908015..968032
location: region:908015-968032:1
so has part: feature:908015-968032:1:exon
subclass of: SO_0000010

100230685
type: Gene
SIO_000068: ncbigene

position:908015:1
position: 908015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:968032:1
position: 968032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:908015-968032:1:exon

PCDH19
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: PCDH19
product: protocadherin 19, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 12 ESTs, 4 long SRA reads, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 70 samples with support for all annotated introns
transcript id: XM_030272399.3
SIO_010081: PCDH19
subclass of: SO_0000673
so part of: PCDH19
location: join(908015..910433,913661..913988,936396..936454,939942..940114,963220..968032)
location: region:908015-968032:1
so has part: feature:908015-910433:1:exon
so has part: feature:913661-913988:1:exon
so has part: feature:936396-936454:1:exon
so has part: feature:939942-940114:1:exon
so has part: feature:963220-968032:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:908015-910433:1:exon

position:910433:1
position: 910433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:913661-913988:1:exon

position:913661:1
position: 913661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:913988:1
position: 913988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:936396-936454:1:exon

position:936396:1
position: 936396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:936454:1
position: 936454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:939942-940114:1:exon

position:939942:1
position: 939942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:940114:1
position: 940114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:963220-968032:1:exon

position:963220:1
position: 963220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PCDH19
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: PCDH19
product: protocadherin 19, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 12 ESTs, 6 long SRA reads, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 86 samples with support for all annotated introns
transcript id: XM_030272401.3
SIO_010081: PCDH19
subclass of: SO_0000673
so part of: PCDH19
location: join(908015..910433,913661..913988,936396..936454,939945..940114,963220..968032)
location: region:908015-968032:1
so has part: feature:908015-910433:1:exon
so has part: feature:913661-913988:1:exon
so has part: feature:936396-936454:1:exon
so has part: feature:939945-940114:1:exon
so has part: feature:963220-968032:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:908015-910433:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:913661-913988:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:936396-936454:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:939945-940114:1:exon

position:939945:1
position: 939945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:963220-968032:1:exon

PCDH19
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: PCDH19
product: protocadherin 19, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 2 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_041716129.1
SIO_010081: PCDH19
subclass of: SO_0000673
so part of: PCDH19
location: join(908015..910433,913661..913988,936396..936454,939942..940114,959313..962779)
location: region:908015-962779:1
so has part: feature:908015-910433:1:exon
so has part: feature:913661-913988:1:exon
so has part: feature:936396-936454:1:exon
so has part: feature:939942-940114:1:exon
so has part: feature:959313-962779:1:exon

position:962779:1
position: 962779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:908015-910433:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:913661-913988:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:936396-936454:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:939942-940114:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:959313-962779:1:exon

position:959313:1
position: 959313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PCDH19
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: PCDH19
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin-19 isoform X1
translation: MGALPALLAAALLWAGAGALVNLKYSVEEEQRAGTVIANVAKDARDAGFVLDPRQPAAFRVVSNSAPHLVDISPGSGLLVTKQKIDRDLLCRQSPKCVISLEVMSSSMEICVIKLEIKDLNDNAPSFPTDQIELEISETASPGTRVPLESAYDPDSGSFGVQSYEITPNDLFGLETKTRGDGSRFAELVVEKSLDRETQSHYSYVITALDGGDPPNFGTVELSIRVIDSNDNNPLFEEPAYTVSVPENAPPGTPVIRLNASDPDEGTNGQVLYSFHSYVSERARELFQIDPQSGLITVSGAIDYEEGHVYELDVQAKDLGPNSIPAHCKVTISVQDANDNPPLINLLSVNSELVEVSENAPPGYVIALVRVSDRDSGANGRVQCKLLGNVPFRLQEYESFSTILVDGRLDREQRDQYNLTIQARDNGIPSLQATKSFTVKITDENDNHPHFSKPYYQVIVQENNTPGAYLLSVSARDPDLGLNGSVSYQIVPSQVRDMPVFTYVSINPNSGDIYALRSFNHEQTKAFEFKVLAKDGGNPSLQSNATVRVIVLDVNDNTPVITAPPLVNGTAEVYIPRNAGVGYLVTVVKADDYDEGENGRLSYEMVEGDRGFFEIDQVNGEIRTTRAFGENAKTAYELIVVAHDHGKTSLSASALILIYLSPALDAQESIGSVNLSLIFIIALGSIAAILFVTMIFVAVKCKRDNKEIRTYNCRIAEYSYGHQKKSSKKKKISKNDIRLVPRDVEETDKMNVVSCSSLTSSLNYFDYHQQTLPLGCRRSESTFLNVESQNSRNAGSNHIYHHTFTGQSPQQPDLIINGMPLPETENYSFDSNYVNSRAHLIKSSSTFKDLEGNSLKDSGHEESDQTDSEHDVQRGLYCDTAVNDVLNTSVPSMGSQGPEPEQSEGFHCREECRILGHSDRCWMPRGAVPSRAKSPEHGRNVIALSIEATAVDAEPYADCGAKRTFATFGKEGGEPPAEERLANPKGKRTVDSAACSPKVSGAVREAGNGCEAVSPVTSPLHLKSPLSGKPAAYGAGHCAGSREREPLGNCGPSRPTEAEPRGADSESSAQEGNPLLQERCEKDSPGARRLKDIVL
SIO_010081: PCDH19
subclass of: SO_0000673
so part of: PCDH19
location: join(908293..910433,913661..913988,936396..936454,939942..940114,963220..963806)
location: region:908293-963806:1
so has part: feature:908293-910433:1:exon
so has part: feature:913661-913988:1:exon
so has part: feature:936396-936454:1:exon
so has part: feature:939942-940114:1:exon
so has part: feature:963220-963806:1:exon

XP_030128259.3
type: Protein
SIO_000068: ncbiprotein

position:908293:1
position: 908293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:963806:1
position: 963806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:908293-910433:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:913661-913988:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:936396-936454:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:939942-940114:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:963220-963806:1:exon

PCDH19
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: PCDH19
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin-19 isoform X2
translation: MGALPALLAAALLWAGAGALVNLKYSVEEEQRAGTVIANVAKDARDAGFVLDPRQPAAFRVVSNSAPHLVDISPGSGLLVTKQKIDRDLLCRQSPKCVISLEVMSSSMEICVIKLEIKDLNDNAPSFPTDQIELEISETASPGTRVPLESAYDPDSGSFGVQSYEITPNDLFGLETKTRGDGSRFAELVVEKSLDRETQSHYSYVITALDGGDPPNFGTVELSIRVIDSNDNNPLFEEPAYTVSVPENAPPGTPVIRLNASDPDEGTNGQVLYSFHSYVSERARELFQIDPQSGLITVSGAIDYEEGHVYELDVQAKDLGPNSIPAHCKVTISVQDANDNPPLINLLSVNSELVEVSENAPPGYVIALVRVSDRDSGANGRVQCKLLGNVPFRLQEYESFSTILVDGRLDREQRDQYNLTIQARDNGIPSLQATKSFTVKITDENDNHPHFSKPYYQVIVQENNTPGAYLLSVSARDPDLGLNGSVSYQIVPSQVRDMPVFTYVSINPNSGDIYALRSFNHEQTKAFEFKVLAKDGGNPSLQSNATVRVIVLDVNDNTPVITAPPLVNGTAEVYIPRNAGVGYLVTVVKADDYDEGENGRLSYEMVEGDRGFFEIDQVNGEIRTTRAFGENAKTAYELIVVAHDHGKTSLSASALILIYLSPALDAQESIGSVNLSLIFIIALGSIAAILFVTMIFVAVKCKRDNKEIRTYNCRIAEYSYGHQKKSSKKKKISKNDIRLVPRDVEETDKMNVVSCSSLTSSLNYFDYHQQTLPLGCRRSESTFLNVESQNSRNAGSNHIYHHTFTGQSPQQPDLIINGMPLPETENYSFDSNYVNSRAHLIKSSTFKDLEGNSLKDSGHEESDQTDSEHDVQRGLYCDTAVNDVLNTSVPSMGSQGPEPEQSEGFHCREECRILGHSDRCWMPRGAVPSRAKSPEHGRNVIALSIEATAVDAEPYADCGAKRTFATFGKEGGEPPAEERLANPKGKRTVDSAACSPKVSGAVREAGNGCEAVSPVTSPLHLKSPLSGKPAAYGAGHCAGSREREPLGNCGPSRPTEAEPRGADSESSAQEGNPLLQERCEKDSPGARRLKDIVL
SIO_010081: PCDH19
subclass of: SO_0000673
so part of: PCDH19
location: join(908293..910433,913661..913988,936396..936454,939945..940114,963220..963806)
location: region:908293-963806:1
so has part: feature:908293-910433:1:exon
so has part: feature:913661-913988:1:exon
so has part: feature:936396-936454:1:exon
so has part: feature:939945-940114:1:exon
so has part: feature:963220-963806:1:exon

XP_030128261.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:908293-910433:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:913661-913988:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:936396-936454:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:939945-940114:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:963220-963806:1:exon

PCDH19
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: PCDH19
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin-19 isoform X3
translation: MGALPALLAAALLWAGAGALVNLKYSVEEEQRAGTVIANVAKDARDAGFVLDPRQPAAFRVVSNSAPHLVDISPGSGLLVTKQKIDRDLLCRQSPKCVISLEVMSSSMEICVIKLEIKDLNDNAPSFPTDQIELEISETASPGTRVPLESAYDPDSGSFGVQSYEITPNDLFGLETKTRGDGSRFAELVVEKSLDRETQSHYSYVITALDGGDPPNFGTVELSIRVIDSNDNNPLFEEPAYTVSVPENAPPGTPVIRLNASDPDEGTNGQVLYSFHSYVSERARELFQIDPQSGLITVSGAIDYEEGHVYELDVQAKDLGPNSIPAHCKVTISVQDANDNPPLINLLSVNSELVEVSENAPPGYVIALVRVSDRDSGANGRVQCKLLGNVPFRLQEYESFSTILVDGRLDREQRDQYNLTIQARDNGIPSLQATKSFTVKITDENDNHPHFSKPYYQVIVQENNTPGAYLLSVSARDPDLGLNGSVSYQIVPSQVRDMPVFTYVSINPNSGDIYALRSFNHEQTKAFEFKVLAKDGGNPSLQSNATVRVIVLDVNDNTPVITAPPLVNGTAEVYIPRNAGVGYLVTVVKADDYDEGENGRLSYEMVEGDRGFFEIDQVNGEIRTTRAFGENAKTAYELIVVAHDHGKTSLSASALILIYLSPALDAQESIGSVNLSLIFIIALGSIAAILFVTMIFVAVKCKRDNKEIRTYNCRIAEYSYGHQKKSSKKKKISKNDIRLVPRDVEETDKMNVVSCSSLTSSLNYFDYHQQTLPLGCRRSESTFLNVESQNSRNAGSNHIYHHTFTGQSPQQPDLIINGMPLPETENYSFDSNYVNSRAHLIKSSSTFKDLEGNSLKDSGHEESDQTDSEHDVQRGLYCDTAVNDVLNTSVPSMGSQGPEPALQFHWR
SIO_010081: PCDH19
subclass of: SO_0000673
so part of: PCDH19
location: join(908293..910433,913661..913988,936396..936454,939942..940114,959313..959335)
location: region:908293-959335:1
so has part: feature:908293-910433:1:exon
so has part: feature:913661-913988:1:exon
so has part: feature:936396-936454:1:exon
so has part: feature:939942-940114:1:exon
so has part: feature:959313-959335:1:exon

XP_041572063.1
type: Protein
SIO_000068: ncbiprotein

position:959335:1
position: 959335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:908293-910433:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:913661-913988:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:936396-936454:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:939942-940114:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:959313-959335:1:exon

LOC115495202
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC115495202
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1062303..1071708
location: region:1062303-1071708:1
so has part: feature:1062303-1071708:1:exon
subclass of: SO_0000011

115495202
type: Gene
SIO_000068: ncbigene

position:1062303:1
position: 1062303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1071708:1
position: 1071708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1062303-1071708:1:exon

LOC115495202
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC115495202
product: uncharacterized LOC115495202
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_005980354.1
SIO_010081: LOC115495202
subclass of: SO_0000673
so part of: LOC115495202
location: join(1062303..1062577,1064228..1064381,1066538..1066659,1070147..1070751,1071300..1071708)
location: region:1062303-1071708:1
so has part: feature:1062303-1062577:1:exon
so has part: feature:1064228-1064381:1:exon
so has part: feature:1066538-1066659:1:exon
so has part: feature:1070147-1070751:1:exon
so has part: feature:1071300-1071708:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1062303-1062577:1:exon

position:1062577:1
position: 1062577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1064228-1064381:1:exon

position:1064228:1
position: 1064228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1064381:1
position: 1064381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1066538-1066659:1:exon

position:1066538:1
position: 1066538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1066659:1
position: 1066659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1070147-1070751:1:exon

position:1070147:1
position: 1070147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1070751:1
position: 1070751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1071300-1071708:1:exon

position:1071300:1
position: 1071300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121469969
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121469969
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1073062..1080487
location: region:1073062-1080487:1
so has part: feature:1073062-1080487:1:exon
subclass of: SO_0000011

121469969
type: Gene
SIO_000068: ncbigene

position:1073062:1
position: 1073062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1080487:1
position: 1080487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1073062-1080487:1:exon

LOC121469969
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC121469969
product: uncharacterized LOC121469969
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XR_005980355.1
SIO_010081: LOC121469969
subclass of: SO_0000673
so part of: LOC121469969
location: join(1073062..1077058,1080392..1080487)
location: region:1073062-1080487:1
so has part: feature:1073062-1077058:1:exon
so has part: feature:1080392-1080487:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1073062-1077058:1:exon

position:1077058:1
position: 1077058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1080392-1080487:1:exon

position:1080392:1
position: 1080392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115495193
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC115495193
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1253065..1254326)
location: region:1253065-1254326:-1
so has part: feature:1253065-1254326:-1:exon
subclass of: SO_0000011

115495193
type: Gene
SIO_000068: ncbigene

position:1253065:-1
position: 1253065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1254326:-1
position: 1254326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1253065-1254326:-1:exon

LOC115495193
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC115495193
product: uncharacterized LOC115495193
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_003960315.3
SIO_010081: LOC115495193
subclass of: SO_0000673
so part of: LOC115495193
location: complement(join(1253065..1253520,1253740..1253784,1254238..1254326))
location: region:1253065-1254326:-1
so has part: feature:1254238-1254326:-1:exon
so has part: feature:1253740-1253784:-1:exon
so has part: feature:1253065-1253520:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1254238-1254326:-1:exon

position:1254238:-1
position: 1254238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1253740-1253784:-1:exon

position:1253740:-1
position: 1253740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1253784:-1
position: 1253784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1253065-1253520:-1:exon

position:1253520:-1
position: 1253520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115495203
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC115495203
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1383055..1389483)
location: region:1383055-1389483:-1
so has part: feature:1383055-1389483:-1:exon
subclass of: SO_0000011

115495203
type: Gene
SIO_000068: ncbigene

position:1383055:-1
position: 1383055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1389483:-1
position: 1389483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1383055-1389483:-1:exon

LOC115495203
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC115495203
product: uncharacterized LOC115495203
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XR_003960335.3
SIO_010081: LOC115495203
subclass of: SO_0000673
so part of: LOC115495203
location: complement(join(1383055..1383974,1388205..1389483))
location: region:1383055-1389483:-1
so has part: feature:1388205-1389483:-1:exon
so has part: feature:1383055-1383974:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1388205-1389483:-1:exon

position:1388205:-1
position: 1388205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1383055-1383974:-1:exon

position:1383974:-1
position: 1383974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121469970
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121469970
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1476449..1484576)
location: region:1476449-1484576:-1
so has part: feature:1476449-1484576:-1:exon
subclass of: SO_0000011

121469970
type: Gene
SIO_000068: ncbigene

position:1476449:-1
position: 1476449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1484576:-1
position: 1484576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1476449-1484576:-1:exon

LOC121469970
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC121469970
product: uncharacterized LOC121469970, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005980357.1
SIO_010081: LOC121469970
subclass of: SO_0000673
so part of: LOC121469970
location: complement(join(1476449..1476653,1482166..1482340,1484495..1484576))
location: region:1476449-1484576:-1
so has part: feature:1484495-1484576:-1:exon
so has part: feature:1482166-1482340:-1:exon
so has part: feature:1476449-1476653:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1484495-1484576:-1:exon

position:1484495:-1
position: 1484495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1482166-1482340:-1:exon

position:1482166:-1
position: 1482166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1482340:-1
position: 1482340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1476449-1476653:-1:exon

position:1476653:-1
position: 1476653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121469970
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC121469970
product: uncharacterized LOC121469970, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_005980356.1
SIO_010081: LOC121469970
subclass of: SO_0000673
so part of: LOC121469970
location: complement(join(1479589..1479767,1482166..1482340,1484495..1484576))
location: region:1479589-1484576:-1
so has part: feature:1484495-1484576:-1:exon
so has part: feature:1482166-1482340:-1:exon
so has part: feature:1479589-1479767:-1:exon

position:1479589:-1
position: 1479589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1484495-1484576:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1482166-1482340:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1479589-1479767:-1:exon

position:1479767:-1
position: 1479767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DIAPH2
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: DIAPH2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1511990..1694824)
location: region:1511990-1694824:-1
so has part: feature:1511990-1694824:-1:exon
subclass of: SO_0000010

100222066
type: Gene
SIO_000068: ncbigene

position:1511990:-1
position: 1511990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1694824:-1
position: 1694824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1511990-1694824:-1:exon

DIAPH2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: DIAPH2
product: diaphanous related formin 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 11 ESTs, 1 long SRA read, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_030272404.3
SIO_010081: DIAPH2
subclass of: SO_0000673
so part of: DIAPH2
location: complement(join(1511990..1516904,1577389..1577484,1586056..1586191,1593266..1593430,1609139..1609263,1620705..1620834,1625476..1625715,1631737..1631838,1633599..1633693,1635073..1635174,1652741..1652855,1655289..1655921,1657529..1657633,1658265..1658329,1658614..1658732,1659275..1659391,1660325..1660443,1662259..1662369,1664704..1664815,1665585..1665721,1666730..1666799,1666881..1666955,1667336..1667475,1675049..1675153,1675998..1676174,1678438..1678470,1694572..1694824))
location: region:1511990-1694824:-1
so has part: feature:1694572-1694824:-1:exon
so has part: feature:1678438-1678470:-1:exon
so has part: feature:1675998-1676174:-1:exon
so has part: feature:1675049-1675153:-1:exon
so has part: feature:1667336-1667475:-1:exon
so has part: feature:1666881-1666955:-1:exon
so has part: feature:1666730-1666799:-1:exon
so has part: feature:1665585-1665721:-1:exon
so has part: feature:1664704-1664815:-1:exon
so has part: feature:1662259-1662369:-1:exon
so has part: feature:1660325-1660443:-1:exon
so has part: feature:1659275-1659391:-1:exon
so has part: feature:1658614-1658732:-1:exon
so has part: feature:1658265-1658329:-1:exon
so has part: feature:1657529-1657633:-1:exon
so has part: feature:1655289-1655921:-1:exon
so has part: feature:1652741-1652855:-1:exon
so has part: feature:1635073-1635174:-1:exon
so has part: feature:1633599-1633693:-1:exon
so has part: feature:1631737-1631838:-1:exon
so has part: feature:1625476-1625715:-1:exon
so has part: feature:1620705-1620834:-1:exon
so has part: feature:1609139-1609263:-1:exon
so has part: feature:1593266-1593430:-1:exon
so has part: feature:1586056-1586191:-1:exon
so has part: feature:1577389-1577484:-1:exon
so has part: feature:1511990-1516904:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1694572-1694824:-1:exon

position:1694572:-1
position: 1694572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1678438-1678470:-1:exon

position:1678438:-1
position: 1678438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1678470:-1
position: 1678470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1675998-1676174:-1:exon

position:1675998:-1
position: 1675998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1676174:-1
position: 1676174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1675049-1675153:-1:exon

position:1675049:-1
position: 1675049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1675153:-1
position: 1675153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1667336-1667475:-1:exon

position:1667336:-1
position: 1667336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1667475:-1
position: 1667475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1666881-1666955:-1:exon

position:1666881:-1
position: 1666881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1666955:-1
position: 1666955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1666730-1666799:-1:exon

position:1666730:-1
position: 1666730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1666799:-1
position: 1666799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1665585-1665721:-1:exon

position:1665585:-1
position: 1665585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1665721:-1
position: 1665721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1664704-1664815:-1:exon

position:1664704:-1
position: 1664704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1664815:-1
position: 1664815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1662259-1662369:-1:exon

position:1662259:-1
position: 1662259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1662369:-1
position: 1662369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1660325-1660443:-1:exon

position:1660325:-1
position: 1660325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1660443:-1
position: 1660443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1659275-1659391:-1:exon

position:1659275:-1
position: 1659275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1659391:-1
position: 1659391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1658614-1658732:-1:exon

position:1658614:-1
position: 1658614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1658732:-1
position: 1658732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1658265-1658329:-1:exon

position:1658265:-1
position: 1658265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1658329:-1
position: 1658329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1657529-1657633:-1:exon

position:1657529:-1
position: 1657529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1657633:-1
position: 1657633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1655289-1655921:-1:exon

position:1655289:-1
position: 1655289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1655921:-1
position: 1655921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1652741-1652855:-1:exon

position:1652741:-1
position: 1652741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1652855:-1
position: 1652855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1635073-1635174:-1:exon

position:1635073:-1
position: 1635073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1635174:-1
position: 1635174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1633599-1633693:-1:exon

position:1633599:-1
position: 1633599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1633693:-1
position: 1633693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1631737-1631838:-1:exon

position:1631737:-1
position: 1631737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1631838:-1
position: 1631838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1625476-1625715:-1:exon

position:1625476:-1
position: 1625476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1625715:-1
position: 1625715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1620705-1620834:-1:exon

position:1620705:-1
position: 1620705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1620834:-1
position: 1620834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1609139-1609263:-1:exon

position:1609139:-1
position: 1609139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1609263:-1
position: 1609263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1593266-1593430:-1:exon

position:1593266:-1
position: 1593266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1593430:-1
position: 1593430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1586056-1586191:-1:exon

position:1586056:-1
position: 1586056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1586191:-1
position: 1586191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1577389-1577484:-1:exon

position:1577389:-1
position: 1577389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1577484:-1
position: 1577484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1511990-1516904:-1:exon

position:1516904:-1
position: 1516904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DIAPH2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: DIAPH2
product: diaphanous related formin 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 11 ESTs, 1 long SRA read, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 52 samples with support for all annotated introns
transcript id: XM_030272403.3
SIO_010081: DIAPH2
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DIAPH2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: DIAPH2
product: diaphanous related formin 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 11 ESTs, 1 long SRA read, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 85 samples with support for all annotated introns
transcript id: XM_030272405.3
SIO_010081: DIAPH2
subclass of: SO_0000673
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DIAPH2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: DIAPH2
product: diaphanous related formin 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 11 ESTs, 1 long SRA read, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_030272407.3
SIO_010081: DIAPH2
subclass of: SO_0000673
so part of: DIAPH2
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DIAPH2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: DIAPH2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein diaphanous homolog 2 isoform X3
translation: MDGHAGPGAGGEEPLSSGRMNAKRGGRAAEEESRNKPKLRDRITSFRKAAVKKEKPLIQHPIDSQPSISEIPHAQALVDERCMNLSEKEVMDLFEKMMEDMNLNEERKAPLRDKDLSTKREMVVQYISATAKSIVGSKVPGGLKNSKHECTLSSQEYIHELRSGISDEKLLNCLESLRVSLTSNPVSWVNNFGHEGLGLLLDALEKLLDKKQQESIDKKNQHKLIQCLKAFMNNKYGLQRILGDERSLLLLSRAIDPKQPHMMTETVKILSAICIVGEENILDKLLGAITTAAERHSREERFSQIVEGLENHEFIQLQVACMQLINALVTSPEDLDFRIHLRNEFLRCGLKKILPALKEKENDELDIQLRVFDENKDEDHFELSHRLNDIKAEMDDVSEVFHLLYNMVKDTSSENYFLSILQHFLLIRNDYYVRPQYYKIIEECVSQIVLHCSGMDPDFKYRGRMDINFTHLVDACVDKAKVEESEKKAAEFSRKFDEEFTARQEAQAELQKREEKIKELETEVKQLRTQGPVLTEVPGIPSALPSENVPPSPAPSLPGGAIPPPPPLPGAATIPPPPPLPGAATIPPPPPLPGGATIPPPPPLPGGAGIPPPPPLPGGAAIPPPPPLPGASFPPAPPPLPGGAIPPPPPLPGVPPPPPLPGAAGPPPPPPLPGGAGPPPPPPLPGGAVPPPPPFGGPPMPPPLGGALFAPFPAVPALPHGMKEKKKYKLEVSMKRINWSKIEPQEIGENSFWVKAEEDKFEDPELFAKLALTFGTQMKAKKPVEESEEKKAAQSKKKIKELRVLDGKSAQNLSIFLGSFRLPYEEIKNIILEVDEEKLSESLIQNLVKNLPEQKELNALAELKDEYNDLAEPEQFGVVMSSVKMLRARLNGILFRLMFEEHVNNIKPDIMAVTLACEELKKSESFSKLLELVLFLGNYMNSGSRNAQSLGFNISFLCKIRDTKSSDQKTTLLHFLAEICEENYRDILKFPDELQHVESASKVSAQTLKSNLDSMNQQIQRLEKDIENFPKTQDEHDKFVEKMSSFAESAREQYEKLSNMHNNMTKLYENLGEYFTFDPKAISIEEFFGDLSNFRTLFLEALKENNKRRELEEKTKRAKLAKEKAERERLERQKKKQQLIDMNKEGDETGVMDSLLEALQSGAAFRDRRKRTPRAPDNKRVTLERSRSRHNGAIAAV
SIO_010081: DIAPH2
subclass of: SO_0000673
so part of: DIAPH2
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XP_030128265.3
type: Protein
SIO_000068: ncbiprotein

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SIO_000628: feature:1635073-1635174:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1633599-1633693:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1631737-1631838:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1625476-1625715:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1620705-1620834:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1609139-1609263:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1593266-1593430:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1586056-1586191:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1577389-1577484:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1516840-1516904:-1:exon

DIAPH2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: DIAPH2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein diaphanous homolog 2 isoform X2
translation: MDGHAGPGAGGEEPLSSGRMNAKRGGRAAEEESRNKPKLNIQIKTLADDVRDRITSFRKAAVKKEKPLIQHPIDSQPSISEIPHAQALVDERCMNLSEKEVMDLFEKMMEDMNLNEERKAPLRDKDLSTKREMVVQYISATAKSGGLKNSKHECTLSSQEYIHELRSGISDEKLLNCLESLRVSLTSNPVSWVNNFGHEGLGLLLDALEKLLDKKQQESIDKKNQHKLIQCLKAFMNNKYGLQRILGDERSLLLLSRAIDPKQPHMMTETVKILSAICIVGEENILDKLLGAITTAAERHSREERFSQIVEGLENHEFIQLQVACMQLINALVTSPEDLDFRIHLRNEFLRCGLKKILPALKEKENDELDIQLRVFDENKDEDHFELSHRLNDIKAEMDDVSEVFHLLYNMVKDTSSENYFLSILQHFLLIRNDYYVRPQYYKIIEECVSQIVLHCSGMDPDFKYRGRMDINFTHLVDACVDKAKVEESEKKAAEFSRKFDEEFTARQEAQAELQKREEKIKELETEVKQLRTQGPVLTEVPGIPSALPSENVPPSPAPSLPGGAIPPPPPLPGAATIPPPPPLPGAATIPPPPPLPGGATIPPPPPLPGGAGIPPPPPLPGGAAIPPPPPLPGASFPPAPPPLPGGAIPPPPPLPGVPPPPPLPGAAGPPPPPPLPGGAGPPPPPPLPGGAVPPPPPFGGPPMPPPLGGALFAPFPAVPALPHGMKEKKKYKLEVSMKRINWSKIEPQEIGENSFWVKAEEDKFEDPELFAKLALTFGTQMKAKKPVEESEEKKAAQSKKKIKELRVLDGKSAQNLSIFLGSFRLPYEEIKNIILEVDEEKLSESLIQNLVKNLPEQKELNALAELKDEYNDLAEPEQFGVVMSSVKMLRARLNGILFRLMFEEHVNNIKPDIMAVTLACEELKKSESFSKLLELVLFLGNYMNSGSRNAQSLGFNISFLCKIRDTKSSDQKTTLLHFLAEICEENYRDILKFPDELQHVESASKVSAQTLKSNLDSMNQQIQRLEKDIENFPKTQDEHDKFVEKMSSFAESAREQYEKLSNMHNNMTKLYENLGEYFTFDPKAISIEEFFGDLSNFRTLFLEALKENNKRRELEEKTKRAKLAKEKAERERLERQKKKQQLIDMNKEGDETGVMDSLLEALQSGAAFRDRRKRTPRAPDNKRVTLERSRSRHNGAIAAV
SIO_010081: DIAPH2
subclass of: SO_0000673
so part of: DIAPH2
location: complement(join(1516840..1516904,1577389..1577484,1586056..1586191,1593266..1593430,1609139..1609263,1620705..1620834,1625476..1625715,1631737..1631838,1633599..1633693,1635073..1635174,1652741..1652855,1655289..1655921,1657529..1657633,1658265..1658329,1658614..1658732,1659275..1659391,1660325..1660443,1662259..1662369,1664704..1664815,1665585..1665721,1666730..1666799,1666881..1666955,1667336..1667475,1675049..1675153,1675998..1676174,1678438..1678470,1694572..1694688))
location: region:1516840-1694688:-1
so has part: feature:1694572-1694688:-1:exon
so has part: feature:1678438-1678470:-1:exon
so has part: feature:1675998-1676174:-1:exon
so has part: feature:1675049-1675153:-1:exon
so has part: feature:1667336-1667475:-1:exon
so has part: feature:1666881-1666955:-1:exon
so has part: feature:1666730-1666799:-1:exon
so has part: feature:1665585-1665721:-1:exon
so has part: feature:1664704-1664815:-1:exon
so has part: feature:1662259-1662369:-1:exon
so has part: feature:1660325-1660443:-1:exon
so has part: feature:1659275-1659391:-1:exon
so has part: feature:1658614-1658732:-1:exon
so has part: feature:1658265-1658329:-1:exon
so has part: feature:1657529-1657633:-1:exon
so has part: feature:1655289-1655921:-1:exon
so has part: feature:1652741-1652855:-1:exon
so has part: feature:1635073-1635174:-1:exon
so has part: feature:1633599-1633693:-1:exon
so has part: feature:1631737-1631838:-1:exon
so has part: feature:1625476-1625715:-1:exon
so has part: feature:1620705-1620834:-1:exon
so has part: feature:1609139-1609263:-1:exon
so has part: feature:1593266-1593430:-1:exon
so has part: feature:1586056-1586191:-1:exon
so has part: feature:1577389-1577484:-1:exon
so has part: feature:1516840-1516904:-1:exon

XP_030128264.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1694572-1694688:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1678438-1678470:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1675998-1676174:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1675049-1675153:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1667336-1667475:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1666881-1666955:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1666730-1666799:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1665585-1665721:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1664704-1664815:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1662259-1662369:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1660325-1660443:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1659275-1659391:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1658614-1658732:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1658265-1658329:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1657529-1657633:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1655289-1655921:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1652741-1652855:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1635073-1635174:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1633599-1633693:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1631737-1631838:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1625476-1625715:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1620705-1620834:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1609139-1609263:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1593266-1593430:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1586056-1586191:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1577389-1577484:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1516840-1516904:-1:exon

DIAPH2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: DIAPH2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein diaphanous homolog 2 isoform X1
translation: MDGHAGPGAGGEEPLSSGRMNAKRGGRAAEEESRNKPKLNIQIKTLADDVRDRITSFRKAAVKKEKPLIQHPIDSQPSISEIPHAQALVDERCMNLSEKEVMDLFEKMMEDMNLNEERKAPLRDKDLSTKREMVVQYISATAKSIVGSKVPGGLKNSKHECTLSSQEYIHELRSGISDEKLLNCLESLRVSLTSNPVSWVNNFGHEGLGLLLDALEKLLDKKQQESIDKKNQHKLIQCLKAFMNNKYGLQRILGDERSLLLLSRAIDPKQPHMMTETVKILSAICIVGEENILDKLLGAITTAAERHSREERFSQIVEGLENHEFIQLQVACMQLINALVTSPEDLDFRIHLRNEFLRCGLKKILPALKEKENDELDIQLRVFDENKDEDHFELSHRLNDIKAEMDDVSEVFHLLYNMVKDTSSENYFLSILQHFLLIRNDYYVRPQYYKIIEECVSQIVLHCSGMDPDFKYRGRMDINFTHLVDACVDKAKVEESEKKAAEFSRKFDEEFTARQEAQAELQKREEKIKELETEVKQLRTQGPVLTEVPGIPSALPSENVPPSPAPSLPGGAIPPPPPLPGAATIPPPPPLPGAATIPPPPPLPGGATIPPPPPLPGGAGIPPPPPLPGGAAIPPPPPLPGASFPPAPPPLPGGAIPPPPPLPGVPPPPPLPGAAGPPPPPPLPGGAGPPPPPPLPGGAVPPPPPFGGPPMPPPLGGALFAPFPAVPALPHGMKEKKKYKLEVSMKRINWSKIEPQEIGENSFWVKAEEDKFEDPELFAKLALTFGTQMKAKKPVEESEEKKAAQSKKKIKELRVLDGKSAQNLSIFLGSFRLPYEEIKNIILEVDEEKLSESLIQNLVKNLPEQKELNALAELKDEYNDLAEPEQFGVVMSSVKMLRARLNGILFRLMFEEHVNNIKPDIMAVTLACEELKKSESFSKLLELVLFLGNYMNSGSRNAQSLGFNISFLCKIRDTKSSDQKTTLLHFLAEICEENYRDILKFPDELQHVESASKVSAQTLKSNLDSMNQQIQRLEKDIENFPKTQDEHDKFVEKMSSFAESAREQYEKLSNMHNNMTKLYENLGEYFTFDPKAISIEEFFGDLSNFRTLFLEALKENNKRRELEEKTKRAKLAKEKAERERLERQKKKQQLIDMNKEGDETGVMDSLLEALQSGAAFRDRRKRTPRAPDNKRVTLERSRSRHNGAIAAV
SIO_010081: DIAPH2
subclass of: SO_0000673
so part of: DIAPH2
location: complement(join(1516840..1516904,1577389..1577484,1586056..1586191,1593266..1593430,1609139..1609263,1620705..1620834,1625476..1625715,1631737..1631838,1633599..1633693,1635073..1635174,1652741..1652855,1655289..1655921,1657529..1657633,1658265..1658329,1658614..1658732,1659275..1659391,1660325..1660443,1662259..1662369,1664704..1664815,1665585..1665721,1666730..1666799,1666881..1666955,1667336..1667475,1671503..1671523,1675049..1675153,1675998..1676174,1678438..1678470,1694572..1694688))
location: region:1516840-1694688:-1
so has part: feature:1694572-1694688:-1:exon
so has part: feature:1678438-1678470:-1:exon
so has part: feature:1675998-1676174:-1:exon
so has part: feature:1675049-1675153:-1:exon
so has part: feature:1671503-1671523:-1:exon
so has part: feature:1667336-1667475:-1:exon
so has part: feature:1666881-1666955:-1:exon
so has part: feature:1666730-1666799:-1:exon
so has part: feature:1665585-1665721:-1:exon
so has part: feature:1664704-1664815:-1:exon
so has part: feature:1662259-1662369:-1:exon
so has part: feature:1660325-1660443:-1:exon
so has part: feature:1659275-1659391:-1:exon
so has part: feature:1658614-1658732:-1:exon
so has part: feature:1658265-1658329:-1:exon
so has part: feature:1657529-1657633:-1:exon
so has part: feature:1655289-1655921:-1:exon
so has part: feature:1652741-1652855:-1:exon
so has part: feature:1635073-1635174:-1:exon
so has part: feature:1633599-1633693:-1:exon
so has part: feature:1631737-1631838:-1:exon
so has part: feature:1625476-1625715:-1:exon
so has part: feature:1620705-1620834:-1:exon
so has part: feature:1609139-1609263:-1:exon
so has part: feature:1593266-1593430:-1:exon
so has part: feature:1586056-1586191:-1:exon
so has part: feature:1577389-1577484:-1:exon
so has part: feature:1516840-1516904:-1:exon

XP_030128263.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1694572-1694688:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1678438-1678470:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1675998-1676174:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1675049-1675153:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1671503-1671523:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1667336-1667475:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1666881-1666955:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1666730-1666799:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1665585-1665721:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1664704-1664815:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1662259-1662369:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1660325-1660443:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1659275-1659391:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1658614-1658732:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1658265-1658329:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1657529-1657633:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1655289-1655921:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1652741-1652855:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1635073-1635174:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1633599-1633693:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1631737-1631838:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1625476-1625715:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1620705-1620834:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1609139-1609263:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1593266-1593430:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1586056-1586191:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1577389-1577484:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1516840-1516904:-1:exon

DIAPH2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: DIAPH2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein diaphanous homolog 2 isoform X5
translation: MRDRITSFRKAAVKKEKPLIQHPIDSQPSISEIPHAQALVDERCMNLSEKEVMDLFEKMMEDMNLNEERKAPLRDKDLSTKREMVVQYISATAKSIVGSKVPGGLKNSKHECTLSSQEYIHELRSGISDEKLLNCLESLRVSLTSNPVSWVNNFGHEGLGLLLDALEKLLDKKQQESIDKKNQHKLIQCLKAFMNNKYGLQRILGDERSLLLLSRAIDPKQPHMMTETVKILSAICIVGEENILDKLLGAITTAAERHSREERFSQIVEGLENHEFIQLQVACMQLINALVTSPEDLDFRIHLRNEFLRCGLKKILPALKEKENDELDIQLRVFDENKDEDHFELSHRLNDIKAEMDDVSEVFHLLYNMVKDTSSENYFLSILQHFLLIRNDYYVRPQYYKIIEECVSQIVLHCSGMDPDFKYRGRMDINFTHLVDACVDKAKVEESEKKAAEFSRKFDEEFTARQEAQAELQKREEKIKELETEVKQLRTQGPVLTEVPGIPSALPSENVPPSPAPSLPGGAIPPPPPLPGAATIPPPPPLPGAATIPPPPPLPGGATIPPPPPLPGGAGIPPPPPLPGGAAIPPPPPLPGASFPPAPPPLPGGAIPPPPPLPGVPPPPPLPGAAGPPPPPPLPGGAGPPPPPPLPGGAVPPPPPFGGPPMPPPLGGALFAPFPAVPALPHGMKEKKKYKLEVSMKRINWSKIEPQEIGENSFWVKAEEDKFEDPELFAKLALTFGTQMKAKKPVEESEEKKAAQSKKKIKELRVLDGKSAQNLSIFLGSFRLPYEEIKNIILEVDEEKLSESLIQNLVKNLPEQKELNALAELKDEYNDLAEPEQFGVVMSSVKMLRARLNGILFRLMFEEHVNNIKPDIMAVTLACEELKKSESFSKLLELVLFLGNYMNSGSRNAQSLGFNISFLCKIRDTKSSDQKTTLLHFLAEICEENYRDILKFPDELQHVESASKVSAQTLKSNLDSMNQQIQRLEKDIENFPKTQDEHDKFVEKMSSFAESAREQYEKLSNMHNNMTKLYENLGEYFTFDPKAISIEEFFGDLSNFRTLFLEALKENNKRRELEEKTKRAKLAKEKAERERLERQKKKQQLIDMNKEGDETGVMDSLLEALQSGAAFRDRRKRTPRAPDNKRVTLERSRSRHNGAIAAV
SIO_010081: DIAPH2
subclass of: SO_0000673
so part of: DIAPH2
location: complement(join(1516840..1516904,1577389..1577484,1586056..1586191,1593266..1593430,1609139..1609263,1620705..1620834,1625476..1625715,1631737..1631838,1633599..1633693,1635073..1635174,1652741..1652855,1655289..1655921,1657529..1657633,1658265..1658329,1658614..1658732,1659275..1659391,1660325..1660443,1662259..1662369,1664704..1664815,1665585..1665721,1666730..1666799,1666881..1666955,1667336..1667475,1671503..1671523,1675049..1675153,1675998..1676174,1678406..1678408))
location: region:1516840-1678408:-1
so has part: feature:1678406-1678408:-1:exon
so has part: feature:1675998-1676174:-1:exon
so has part: feature:1675049-1675153:-1:exon
so has part: feature:1671503-1671523:-1:exon
so has part: feature:1667336-1667475:-1:exon
so has part: feature:1666881-1666955:-1:exon
so has part: feature:1666730-1666799:-1:exon
so has part: feature:1665585-1665721:-1:exon
so has part: feature:1664704-1664815:-1:exon
so has part: feature:1662259-1662369:-1:exon
so has part: feature:1660325-1660443:-1:exon
so has part: feature:1659275-1659391:-1:exon
so has part: feature:1658614-1658732:-1:exon
so has part: feature:1658265-1658329:-1:exon
so has part: feature:1657529-1657633:-1:exon
so has part: feature:1655289-1655921:-1:exon
so has part: feature:1652741-1652855:-1:exon
so has part: feature:1635073-1635174:-1:exon
so has part: feature:1633599-1633693:-1:exon
so has part: feature:1631737-1631838:-1:exon
so has part: feature:1625476-1625715:-1:exon
so has part: feature:1620705-1620834:-1:exon
so has part: feature:1609139-1609263:-1:exon
so has part: feature:1593266-1593430:-1:exon
so has part: feature:1586056-1586191:-1:exon
so has part: feature:1577389-1577484:-1:exon
so has part: feature:1516840-1516904:-1:exon

XP_030128267.1
type: Protein
SIO_000068: ncbiprotein

position:1678408:-1
position: 1678408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1678406-1678408:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1675998-1676174:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1675049-1675153:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1671503-1671523:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1667336-1667475:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1666881-1666955:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1666730-1666799:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1665585-1665721:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1664704-1664815:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1662259-1662369:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1660325-1660443:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1659275-1659391:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1658614-1658732:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1658265-1658329:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1657529-1657633:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1655289-1655921:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1652741-1652855:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1635073-1635174:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1633599-1633693:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1631737-1631838:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1625476-1625715:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1620705-1620834:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1609139-1609263:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1593266-1593430:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1586056-1586191:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1577389-1577484:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1516840-1516904:-1:exon

DIAPH2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: DIAPH2
product: diaphanous related formin 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_030272406.3
SIO_010081: DIAPH2
subclass of: SO_0000673
so part of: DIAPH2
location: complement(join(1570634..1576358,1577389..1577484,1586056..1586191,1593266..1593430,1609139..1609263,1620705..1620834,1625476..1625715,1631737..1631838,1633599..1633693,1635073..1635174,1652741..1652855,1655289..1655921,1657529..1657633,1658265..1658329,1658614..1658732,1659275..1659391,1660325..1660443,1662259..1662369,1664704..1664815,1665585..1665721,1666730..1666799,1666881..1666955,1667336..1667475,1671503..1671523,1675049..1675153,1675998..1676174,1678438..1678470,1694572..1694824))
location: region:1570634-1694824:-1
so has part: feature:1694572-1694824:-1:exon
so has part: feature:1678438-1678470:-1:exon
so has part: feature:1675998-1676174:-1:exon
so has part: feature:1675049-1675153:-1:exon
so has part: feature:1671503-1671523:-1:exon
so has part: feature:1667336-1667475:-1:exon
so has part: feature:1666881-1666955:-1:exon
so has part: feature:1666730-1666799:-1:exon
so has part: feature:1665585-1665721:-1:exon
so has part: feature:1664704-1664815:-1:exon
so has part: feature:1662259-1662369:-1:exon
so has part: feature:1660325-1660443:-1:exon
so has part: feature:1659275-1659391:-1:exon
so has part: feature:1658614-1658732:-1:exon
so has part: feature:1658265-1658329:-1:exon
so has part: feature:1657529-1657633:-1:exon
so has part: feature:1655289-1655921:-1:exon
so has part: feature:1652741-1652855:-1:exon
so has part: feature:1635073-1635174:-1:exon
so has part: feature:1633599-1633693:-1:exon
so has part: feature:1631737-1631838:-1:exon
so has part: feature:1625476-1625715:-1:exon
so has part: feature:1620705-1620834:-1:exon
so has part: feature:1609139-1609263:-1:exon
so has part: feature:1593266-1593430:-1:exon
so has part: feature:1586056-1586191:-1:exon
so has part: feature:1577389-1577484:-1:exon
so has part: feature:1570634-1576358:-1:exon

position:1570634:-1
position: 1570634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1694572-1694824:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1678438-1678470:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1675998-1676174:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1675049-1675153:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1671503-1671523:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1667336-1667475:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1666881-1666955:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1666730-1666799:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1665585-1665721:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1664704-1664815:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1662259-1662369:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1660325-1660443:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1659275-1659391:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1658614-1658732:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1658265-1658329:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1657529-1657633:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1655289-1655921:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1652741-1652855:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1635073-1635174:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1633599-1633693:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1631737-1631838:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1625476-1625715:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1620705-1620834:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1609139-1609263:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1593266-1593430:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1586056-1586191:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1577389-1577484:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1570634-1576358:-1:exon

position:1576358:-1
position: 1576358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DIAPH2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: DIAPH2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein diaphanous homolog 2 isoform X4
translation: MDGHAGPGAGGEEPLSSGRMNAKRGGRAAEEESRNKPKLNIQIKTLADDVRDRITSFRKAAVKKEKPLIQHPIDSQPSISEIPHAQALVDERCMNLSEKEVMDLFEKMMEDMNLNEERKAPLRDKDLSTKREMVVQYISATAKSIVGSKVPGGLKNSKHECTLSSQEYIHELRSGISDEKLLNCLESLRVSLTSNPVSWVNNFGHEGLGLLLDALEKLLDKKQQESIDKKNQHKLIQCLKAFMNNKYGLQRILGDERSLLLLSRAIDPKQPHMMTETVKILSAICIVGEENILDKLLGAITTAAERHSREERFSQIVEGLENHEFIQLQVACMQLINALVTSPEDLDFRIHLRNEFLRCGLKKILPALKEKENDELDIQLRVFDENKDEDHFELSHRLNDIKAEMDDVSEVFHLLYNMVKDTSSENYFLSILQHFLLIRNDYYVRPQYYKIIEECVSQIVLHCSGMDPDFKYRGRMDINFTHLVDACVDKAKVEESEKKAAEFSRKFDEEFTARQEAQAELQKREEKIKELETEVKQLRTQGPVLTEVPGIPSALPSENVPPSPAPSLPGGAIPPPPPLPGAATIPPPPPLPGAATIPPPPPLPGGATIPPPPPLPGGAGIPPPPPLPGGAAIPPPPPLPGASFPPAPPPLPGGAIPPPPPLPGVPPPPPLPGAAGPPPPPPLPGGAGPPPPPPLPGGAVPPPPPFGGPPMPPPLGGALFAPFPAVPALPHGMKEKKKYKLEVSMKRINWSKIEPQEIGENSFWVKAEEDKFEDPELFAKLALTFGTQMKAKKPVEESEEKKAAQSKKKIKELRVLDGKSAQNLSIFLGSFRLPYEEIKNIILEVDEEKLSESLIQNLVKNLPEQKELNALAELKDEYNDLAEPEQFGVVMSSVKMLRARLNGILFRLMFEEHVNNIKPDIMAVTLACEELKKSESFSKLLELVLFLGNYMNSGSRNAQSLGFNISFLCKIRDTKSSDQKTTLLHFLAEICEENYRDILKFPDELQHVESASKVSAQTLKSNLDSMNQQIQRLEKDIENFPKTQDEHDKFVEKMSSFAESAREQYEKLSNMHNNMTKLYENLGEYFTFDPKAISIEEFFGDLSNFRTLFLEALKENNKRRELEEKTKRAKLAKEKAERERLERQKKKQQLIDMNKEGDETGVMDSLLEALQSGAAFRDRRKRTPRAPDQT
SIO_010081: DIAPH2
subclass of: SO_0000673
so part of: DIAPH2
location: complement(join(1576348..1576358,1577389..1577484,1586056..1586191,1593266..1593430,1609139..1609263,1620705..1620834,1625476..1625715,1631737..1631838,1633599..1633693,1635073..1635174,1652741..1652855,1655289..1655921,1657529..1657633,1658265..1658329,1658614..1658732,1659275..1659391,1660325..1660443,1662259..1662369,1664704..1664815,1665585..1665721,1666730..1666799,1666881..1666955,1667336..1667475,1671503..1671523,1675049..1675153,1675998..1676174,1678438..1678470,1694572..1694688))
location: region:1576348-1694688:-1
so has part: feature:1694572-1694688:-1:exon
so has part: feature:1678438-1678470:-1:exon
so has part: feature:1675998-1676174:-1:exon
so has part: feature:1675049-1675153:-1:exon
so has part: feature:1671503-1671523:-1:exon
so has part: feature:1667336-1667475:-1:exon
so has part: feature:1666881-1666955:-1:exon
so has part: feature:1666730-1666799:-1:exon
so has part: feature:1665585-1665721:-1:exon
so has part: feature:1664704-1664815:-1:exon
so has part: feature:1662259-1662369:-1:exon
so has part: feature:1660325-1660443:-1:exon
so has part: feature:1659275-1659391:-1:exon
so has part: feature:1658614-1658732:-1:exon
so has part: feature:1658265-1658329:-1:exon
so has part: feature:1657529-1657633:-1:exon
so has part: feature:1655289-1655921:-1:exon
so has part: feature:1652741-1652855:-1:exon
so has part: feature:1635073-1635174:-1:exon
so has part: feature:1633599-1633693:-1:exon
so has part: feature:1631737-1631838:-1:exon
so has part: feature:1625476-1625715:-1:exon
so has part: feature:1620705-1620834:-1:exon
so has part: feature:1609139-1609263:-1:exon
so has part: feature:1593266-1593430:-1:exon
so has part: feature:1586056-1586191:-1:exon
so has part: feature:1577389-1577484:-1:exon
so has part: feature:1576348-1576358:-1:exon

XP_030128266.3
type: Protein
SIO_000068: ncbiprotein

position:1576348:-1
position: 1576348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1694572-1694688:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1678438-1678470:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1675998-1676174:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1675049-1675153:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1671503-1671523:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1667336-1667475:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1666881-1666955:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1666730-1666799:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1665585-1665721:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1664704-1664815:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1662259-1662369:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1660325-1660443:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1659275-1659391:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1658614-1658732:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1658265-1658329:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1657529-1657633:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1655289-1655921:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1652741-1652855:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1635073-1635174:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1633599-1633693:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1631737-1631838:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1625476-1625715:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1620705-1620834:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1609139-1609263:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1593266-1593430:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1586056-1586191:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1577389-1577484:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1576348-1576358:-1:exon

LOC115495204
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC115495204
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1730999..1738565
location: region:1730999-1738565:1
so has part: feature:1730999-1738565:1:exon
subclass of: SO_0000011

115495204
type: Gene
SIO_000068: ncbigene

position:1730999:1
position: 1730999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1738565:1
position: 1738565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1730999-1738565:1:exon

LOC115495204
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC115495204
product: uncharacterized LOC115495204
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XR_003960336.3
SIO_010081: LOC115495204
subclass of: SO_0000673
so part of: LOC115495204
location: join(1730999..1732250,1735336..1738565)
location: region:1730999-1738565:1
so has part: feature:1730999-1732250:1:exon
so has part: feature:1735336-1738565:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1730999-1732250:1:exon

position:1732250:1
position: 1732250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1735336-1738565:1:exon

position:1735336:1
position: 1735336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115495205
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC115495205
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1768957..1772529
location: region:1768957-1772529:1
so has part: feature:1768957-1772529:1:exon
subclass of: SO_0000011

115495205
type: Gene
SIO_000068: ncbigene

position:1768957:1
position: 1768957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1772529:1
position: 1772529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1768957-1772529:1:exon

LOC115495205
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC115495205
product: uncharacterized LOC115495205, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_005980358.1
SIO_010081: LOC115495205
subclass of: SO_0000673
so part of: LOC115495205
location: join(1768957..1769310,1769684..1772529)
location: region:1768957-1772529:1
so has part: feature:1768957-1769310:1:exon
so has part: feature:1769684-1772529:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1768957-1769310:1:exon

position:1769310:1
position: 1769310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1769684-1772529:1:exon

position:1769684:1
position: 1769684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115495205
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC115495205
product: uncharacterized LOC115495205, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_005980359.1
SIO_010081: LOC115495205
subclass of: SO_0000673
so part of: LOC115495205
location: join(1768957..1769310,1769684..1770645,1772221..1772529)
location: region:1768957-1772529:1
so has part: feature:1768957-1769310:1:exon
so has part: feature:1769684-1770645:1:exon
so has part: feature:1772221-1772529:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1768957-1769310:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1769684-1770645:1:exon

position:1770645:1
position: 1770645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1772221-1772529:1:exon

position:1772221:1
position: 1772221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115495206
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC115495206
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2077798..2085970)
location: region:2077798-2085970:-1
so has part: feature:2077798-2085970:-1:exon
subclass of: SO_0000011

115495206
type: Gene
SIO_000068: ncbigene

position:2077798:-1
position: 2077798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2085970:-1
position: 2085970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2077798-2085970:-1:exon

LOC115495206
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC115495206
product: uncharacterized LOC115495206
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XR_003960339.3
SIO_010081: LOC115495206
subclass of: SO_0000673
so part of: LOC115495206
location: complement(join(2077798..2077968,2078290..2078427,2085667..2085970))
location: region:2077798-2085970:-1
so has part: feature:2085667-2085970:-1:exon
so has part: feature:2078290-2078427:-1:exon
so has part: feature:2077798-2077968:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2085667-2085970:-1:exon

position:2085667:-1
position: 2085667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2078290-2078427:-1:exon

position:2078290:-1
position: 2078290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2078427:-1
position: 2078427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2077798-2077968:-1:exon

position:2077968:-1
position: 2077968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCDH11X
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: PCDH11X
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2213212..2639777)
location: region:2213212-2639777:-1
so has part: feature:2213212-2639777:-1:exon
subclass of: SO_0000010

100220200
type: Gene
SIO_000068: ncbigene

position:2213212:-1
position: 2213212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2639777:-1
position: 2639777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2213212-2639777:-1:exon

PCDH11X
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: PCDH11X
product: protocadherin 11 X-linked, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 1 long SRA read, 31 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_030272410.3
SIO_010081: PCDH11X
subclass of: SO_0000673
so part of: PCDH11X
location: complement(join(2213212..2218033,2333431..2333629,2443134..2443205,2570301..2572787,2595453..2596036,2639380..2639777))
location: region:2213212-2639777:-1
so has part: feature:2639380-2639777:-1:exon
so has part: feature:2595453-2596036:-1:exon
so has part: feature:2570301-2572787:-1:exon
so has part: feature:2443134-2443205:-1:exon
so has part: feature:2333431-2333629:-1:exon
so has part: feature:2213212-2218033:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2639380-2639777:-1:exon

position:2639380:-1
position: 2639380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2595453-2596036:-1:exon

position:2595453:-1
position: 2595453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2596036:-1
position: 2596036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2570301-2572787:-1:exon

position:2570301:-1
position: 2570301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2572787:-1
position: 2572787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2443134-2443205:-1:exon

position:2443134:-1
position: 2443134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2443205:-1
position: 2443205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2333431-2333629:-1:exon

position:2333431:-1
position: 2333431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2333629:-1
position: 2333629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2213212-2218033:-1:exon

position:2218033:-1
position: 2218033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCDH11X
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: PCDH11X
product: protocadherin 11 X-linked, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs, 1 long SRA read, 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 54 samples with support for all annotated introns
transcript id: XM_030272409.3
SIO_010081: PCDH11X
subclass of: SO_0000673
so part of: PCDH11X
location: complement(join(2213212..2218033,2333431..2333629,2443134..2443205,2570301..2572787,2575880..2575927,2595453..2596036,2639380..2639777))
location: region:2213212-2639777:-1
so has part: feature:2639380-2639777:-1:exon
so has part: feature:2595453-2596036:-1:exon
so has part: feature:2575880-2575927:-1:exon
so has part: feature:2570301-2572787:-1:exon
so has part: feature:2443134-2443205:-1:exon
so has part: feature:2333431-2333629:-1:exon
so has part: feature:2213212-2218033:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2639380-2639777:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2595453-2596036:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2575880-2575927:-1:exon

position:2575880:-1
position: 2575880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2575927:-1
position: 2575927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2570301-2572787:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2443134-2443205:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2333431-2333629:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2213212-2218033:-1:exon

PCDH11X
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: PCDH11X
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin-11 X-linked isoform X2
translation: MDLLSGTYLLAVLLACIVFQSGAQEKNYTVREELPENVLIGNLLKDLNLTLDPDVPLSSPLQFKLVYKTGDVPLVRVEENTGEIFTAANRIDREKLCAGIVSENRCFYEVEVAVLPDEVFRLVKIRFLIEDINDNAPLFPSTVINISIPENTAINSRYSVPSAIDPDIGVNGIQHYELLKGQNVFGLDITETPEGDKWPQLIVQQILDREQKDTYVMKIKVEDGGSPPRSSTAILQVTVTDVNDNRPVFKENDVEVSVPENAPVGTSVSQLHATDADLGSNAQIHFYFSNQISSLAKRLFAIDNTTGLITIREPLDREESPVHKLTVLASDGSSTPSRATVTVNVTDINDNVPSIDTRYIINPVNGTVLLSEKAPLNTKIALITVMDKDADQNGKVTCFTDHDVPFRLKPVFDNQFLLETATFLDYEATREYAIKIVASDSGKPPLNQSAMLLIKIKDENDNAPVFTQPIIGLSIPENNAPGTQLTKISATDADSGRNAEISYILGSDAPPIFNLDRRTGILTAVRKLDREKQDRYSFTVLAKDNGMPPLQTNATVTVSVLDQNDNSPAFTHNEYNFYVPENLPMYGTVGLITVTDADAGDNAAVTLSILNGRDNFIIDPLTGVIRPNITFDREQQGSYTFQVKAVDGGRLQRSSTAKVTINVVDVNDNRPVFVIPSSNYSYELVPTSASPGSVVTKVFAVDNDTGMNAELRYSIIGGNARGLFTIDQLTGNITLKEKVIASDHGLHRLVIKVNDLGQPESLYTIALVHLFVNETVTNSSYVQELVRRNMETPVGQNIGDGEITPQTNDYVKIIIAIIAGTMTVILVIFVTALVRCRQTPRHKVVQKNKQSGEWVSPNQENRQIKKKKKKKKRSPKSLLLNFVTIEESKPDDPGHEHINGTLDIPVELEEQTMGKYNWATTPTTFKPDSPDLAKHYKSASPQPTFQIKPETPVPPKKHHVIQELPLDNTFVVGCDSLSKCSSSSSDPYSVSECSCQGGFKTPGPIHTRQHTKEVGRPQTPLKETTLESWTQPQPQRRVTFHLPDGSQESCSDSGLGDHEPTSGASTSHPLPLGFPQDEFYEQASPNSRTEGDGNSDPESTIEVNLQKALAEASENCTQECLILGHSDNCWMPPALTQFQQPNTSLPSFGFQQGWGRGARPEGRHTLGRPLPKDDSDKGQGGPRPQFYNTCERHCAGEDPVKVIPLANFAASHPAPGAGSSATFIHEHQL
SIO_010081: PCDH11X
subclass of: SO_0000673
so part of: PCDH11X
location: complement(join(2217642..2218033,2333431..2333629,2443134..2443205,2570301..2572787,2595453..2595992))
location: region:2217642-2595992:-1
so has part: feature:2595453-2595992:-1:exon
so has part: feature:2570301-2572787:-1:exon
so has part: feature:2443134-2443205:-1:exon
so has part: feature:2333431-2333629:-1:exon
so has part: feature:2217642-2218033:-1:exon

XP_030128270.3
type: Protein
SIO_000068: ncbiprotein

position:2217642:-1
position: 2217642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2595992:-1
position: 2595992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2595453-2595992:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2570301-2572787:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2443134-2443205:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2333431-2333629:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2217642-2218033:-1:exon

PCDH11X
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: PCDH11X
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin-11 X-linked isoform X1
translation: MDLLSGTYLLAVLLACIVFQSGAQEKNYTVREELPENVLIGNLLKDLNLTLDPDVPLSSPLQFKLVYKTGDVPLVRVEENTGEIFTAANRIDREKLCAGIVSENRCFYEVEVAVLPDEVFRLVKIRFLIEDINDNAPLFPSTVINISIPENTAINSRYSVPSAIDPDIGVNGIQHYELLKPKTAPKRTFGSITNDQGQNVFGLDITETPEGDKWPQLIVQQILDREQKDTYVMKIKVEDGGSPPRSSTAILQVTVTDVNDNRPVFKENDVEVSVPENAPVGTSVSQLHATDADLGSNAQIHFYFSNQISSLAKRLFAIDNTTGLITIREPLDREESPVHKLTVLASDGSSTPSRATVTVNVTDINDNVPSIDTRYIINPVNGTVLLSEKAPLNTKIALITVMDKDADQNGKVTCFTDHDVPFRLKPVFDNQFLLETATFLDYEATREYAIKIVASDSGKPPLNQSAMLLIKIKDENDNAPVFTQPIIGLSIPENNAPGTQLTKISATDADSGRNAEISYILGSDAPPIFNLDRRTGILTAVRKLDREKQDRYSFTVLAKDNGMPPLQTNATVTVSVLDQNDNSPAFTHNEYNFYVPENLPMYGTVGLITVTDADAGDNAAVTLSILNGRDNFIIDPLTGVIRPNITFDREQQGSYTFQVKAVDGGRLQRSSTAKVTINVVDVNDNRPVFVIPSSNYSYELVPTSASPGSVVTKVFAVDNDTGMNAELRYSIIGGNARGLFTIDQLTGNITLKEKVIASDHGLHRLVIKVNDLGQPESLYTIALVHLFVNETVTNSSYVQELVRRNMETPVGQNIGDGEITPQTNDYVKIIIAIIAGTMTVILVIFVTALVRCRQTPRHKVVQKNKQSGEWVSPNQENRQIKKKKKKKKRSPKSLLLNFVTIEESKPDDPGHEHINGTLDIPVELEEQTMGKYNWATTPTTFKPDSPDLAKHYKSASPQPTFQIKPETPVPPKKHHVIQELPLDNTFVVGCDSLSKCSSSSSDPYSVSECSCQGGFKTPGPIHTRQHTKEVGRPQTPLKETTLESWTQPQPQRRVTFHLPDGSQESCSDSGLGDHEPTSGASTSHPLPLGFPQDEFYEQASPNSRTEGDGNSDPESTIEVNLQKALAEASENCTQECLILGHSDNCWMPPALTQFQQPNTSLPSFGFQQGWGRGARPEGRHTLGRPLPKDDSDKGQGGPRPQFYNTCERHCAGEDPVKVIPLANFAASHPAPGAGSSATFIHEHQL
SIO_010081: PCDH11X
subclass of: SO_0000673
so part of: PCDH11X
location: complement(join(2217642..2218033,2333431..2333629,2443134..2443205,2570301..2572787,2575880..2575927,2595453..2595992))
location: region:2217642-2595992:-1
so has part: feature:2595453-2595992:-1:exon
so has part: feature:2575880-2575927:-1:exon
so has part: feature:2570301-2572787:-1:exon
so has part: feature:2443134-2443205:-1:exon
so has part: feature:2333431-2333629:-1:exon
so has part: feature:2217642-2218033:-1:exon

XP_030128269.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2595453-2595992:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2575880-2575927:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2570301-2572787:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2443134-2443205:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2333431-2333629:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2217642-2218033:-1:exon

PCDH11X
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: PCDH11X
product: protocadherin 11 X-linked, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs, 5 long SRA reads, 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 57 samples with support for all annotated introns
transcript id: XM_012573008.4
SIO_010081: PCDH11X
subclass of: SO_0000673
so part of: PCDH11X
location: complement(join(2559694..2563548,2570301..2572787,2575880..2575927,2595453..2596036,2639380..2639777))
location: region:2559694-2639777:-1
so has part: feature:2639380-2639777:-1:exon
so has part: feature:2595453-2596036:-1:exon
so has part: feature:2575880-2575927:-1:exon
so has part: feature:2570301-2572787:-1:exon
so has part: feature:2559694-2563548:-1:exon

position:2559694:-1
position: 2559694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2639380-2639777:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2595453-2596036:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2575880-2575927:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2570301-2572787:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2559694-2563548:-1:exon

position:2563548:-1
position: 2563548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCDH11X
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: PCDH11X
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin-11 X-linked isoform X3
translation: MDLLSGTYLLAVLLACIVFQSGAQEKNYTVREELPENVLIGNLLKDLNLTLDPDVPLSSPLQFKLVYKTGDVPLVRVEENTGEIFTAANRIDREKLCAGIVSENRCFYEVEVAVLPDEVFRLVKIRFLIEDINDNAPLFPSTVINISIPENTAINSRYSVPSAIDPDIGVNGIQHYELLKPKTAPKRTFGSITNDQGQNVFGLDITETPEGDKWPQLIVQQILDREQKDTYVMKIKVEDGGSPPRSSTAILQVTVTDVNDNRPVFKENDVEVSVPENAPVGTSVSQLHATDADLGSNAQIHFYFSNQISSLAKRLFAIDNTTGLITIREPLDREESPVHKLTVLASDGSSTPSRATVTVNVTDINDNVPSIDTRYIINPVNGTVLLSEKAPLNTKIALITVMDKDADQNGKVTCFTDHDVPFRLKPVFDNQFLLETATFLDYEATREYAIKIVASDSGKPPLNQSAMLLIKIKDENDNAPVFTQPIIGLSIPENNAPGTQLTKISATDADSGRNAEISYILGSDAPPIFNLDRRTGILTAVRKLDREKQDRYSFTVLAKDNGMPPLQTNATVTVSVLDQNDNSPAFTHNEYNFYVPENLPMYGTVGLITVTDADAGDNAAVTLSILNGRDNFIIDPLTGVIRPNITFDREQQGSYTFQVKAVDGGRLQRSSTAKVTINVVDVNDNRPVFVIPSSNYSYELVPTSASPGSVVTKVFAVDNDTGMNAELRYSIIGGNARGLFTIDQLTGNITLKEKVIASDHGLHRLVIKVNDLGQPESLYTIALVHLFVNETVTNSSYVQELVRRNMETPVGQNIGDGEITPQTNDYVKIIIAIIAGTMTVILVIFVTALVRCRQTPRHKVVQKNKQSGEWVSPNQENRQIKKKKKKKKRSPKSLLLNFVTIEESKPDDPGHEHINGTLDIPVELEEQTMGKYNWATTPTTFKPDSPDLAKHYKSASPQPTFQIKPETPVPPKKHHVIQELPLDNTFVVGCDSLSKCSSSSSDPYSVSECSCQGGFKTPGPIHTRQL
SIO_010081: PCDH11X
subclass of: SO_0000673
so part of: PCDH11X
location: complement(join(2563543..2563548,2570301..2572787,2575880..2575927,2595453..2595992))
location: region:2563543-2595992:-1
so has part: feature:2595453-2595992:-1:exon
so has part: feature:2575880-2575927:-1:exon
so has part: feature:2570301-2572787:-1:exon
so has part: feature:2563543-2563548:-1:exon

XP_012428462.1
type: Protein
SIO_000068: ncbiprotein

position:2563543:-1
position: 2563543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2595453-2595992:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2575880-2575927:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2570301-2572787:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2563543-2563548:-1:exon

LOC121470004
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121470004
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2639673..2643775)
location: region:2639673-2643775:-1
so has part: feature:2639673-2643775:-1:exon
subclass of: SO_0000010

121470004
type: Gene
SIO_000068: ncbigene

position:2639673:-1
position: 2639673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2643775:-1
position: 2643775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2639673-2643775:-1:exon

LOC121470004
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC121470004
product: basic proline-rich protein-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_041716282.1
SIO_010081: LOC121470004
subclass of: SO_0000673
so part of: LOC121470004
location: complement(join(2639673..2641030,2641133..2641582,2643742..2643775))
location: region:2639673-2643775:-1
so has part: feature:2643742-2643775:-1:exon
so has part: feature:2641133-2641582:-1:exon
so has part: feature:2639673-2641030:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2643742-2643775:-1:exon

position:2643742:-1
position: 2643742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2641133-2641582:-1:exon

position:2641133:-1
position: 2641133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2641582:-1
position: 2641582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2639673-2641030:-1:exon

position:2641030:-1
position: 2641030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121470004
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC121470004
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: basic proline-rich protein-like
translation: MWPLNDLSGDQRPPAPTPGCIAPGIAPRRTPRPQRCPSGERVRLQPGPTDTGGRRGRPRPALLPSAVSPRRRLRHHTPASAVVSRTPELRPERGTAETCGTPAPLRAQGSQHLRVPKTPEPGHSASPEPGHSASPEPGHSASPEPRYPSPPRPGPQHPPSLASSESGHPTPPRRALSIPRARVPKTPEPGHPTPPGTQNLRARALSIPRARAPNTPEPGHSASPEPGYPKPPSPGTQHLRVPKTSEPGHSASPEPGHPTPPSPGTQHPPSPGIQPCRREGSAQPGRCPPAAPARSLLAAPVRQRERGSAPLPPRAAAGAVGAGTAALTGREGGRRSRGRQLFCGHGRSPSRGQAEGRSLTSPLAPPPRRLCRRGARRREAGTHRRAPLRSRSHPERRCPRFSPARIRPPGSTAGRGAPAGTGAAPRRGGGAATPPLSGDSPRGAGRAAPGGGTPLGPAIRVPGVAPPPGADVSRGEGRLAAAERGAGGRGRAQPEPPPPPPGQRGLRGAAGSAARAPGPAGQLRAAPGSSGPAPPGAGRAASGGRCPAGEAGAPVSAAARRGKGSRAAPRSRAEFRGSPRNLGYAAGPLRTGAGLPGRDCLRIVSRLQKQIID
SIO_010081: LOC121470004
subclass of: SO_0000673
so part of: LOC121470004
location: complement(join(2639673..2641030,2641133..2641582,2643742..2643775))
location: region:2639673-2643775:-1
so has part: feature:2643742-2643775:-1:exon
so has part: feature:2641133-2641582:-1:exon
so has part: feature:2639673-2641030:-1:exon

XP_041572216.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2643742-2643775:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2641133-2641582:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2639673-2641030:-1:exon

LOC121469971
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121469971
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2677239..2680001)
location: region:2677239-2680001:-1
so has part: feature:2677239-2680001:-1:exon
subclass of: SO_0000011

121469971
type: Gene
SIO_000068: ncbigene

position:2677239:-1
position: 2677239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2680001:-1
position: 2680001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2677239-2680001:-1:exon

LOC121469971
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC121469971
product: uncharacterized LOC121469971
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_005980360.1
SIO_010081: LOC121469971
subclass of: SO_0000673
so part of: LOC121469971
location: complement(join(2677239..2677680,2679960..2680001))
location: region:2677239-2680001:-1
so has part: feature:2679960-2680001:-1:exon
so has part: feature:2677239-2677680:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2679960-2680001:-1:exon

position:2679960:-1
position: 2679960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2677239-2677680:-1:exon

position:2677680:-1
position: 2677680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116808417
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC116808417
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3136055..3141302
location: region:3136055-3141302:1
so has part: feature:3136055-3141302:1:exon
subclass of: SO_0000011

116808417
type: Gene
SIO_000068: ncbigene

position:3136055:1
position: 3136055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3141302:1
position: 3141302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3136055-3141302:1:exon

LOC116808417
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC116808417
product: uncharacterized LOC116808417
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XR_004367861.2
SIO_010081: LOC116808417
subclass of: SO_0000673
so part of: LOC116808417
location: join(3136055..3136165,3138817..3141302)
location: region:3136055-3141302:1
so has part: feature:3136055-3136165:1:exon
so has part: feature:3138817-3141302:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3136055-3136165:1:exon

position:3136165:1
position: 3136165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3138817-3141302:1:exon

position:3138817:1
position: 3138817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

KLHL4
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: KLHL4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3504015..3540230)
location: region:3504015-3540230:-1
so has part: feature:3504015-3540230:-1:exon
subclass of: SO_0000010

100228809
type: Gene
SIO_000068: ncbigene

position:3504015:-1
position: 3504015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3540230:-1
position: 3540230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3504015-3540230:-1:exon

KLHL4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: KLHL4
product: kelch like family member 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 5 long SRA reads, 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 91 samples with support for all annotated introns
transcript id: XM_002192409.6
SIO_010081: KLHL4
subclass of: SO_0000673
so part of: KLHL4
location: complement(join(3504015..3505630,3506162..3506333,3507431..3507643,3510650..3510812,3512647..3512871,3515991..3516177,3517238..3517450,3520270..3520466,3521117..3521253,3522140..3522310,3539137..3540230))
location: region:3504015-3540230:-1
so has part: feature:3539137-3540230:-1:exon
so has part: feature:3522140-3522310:-1:exon
so has part: feature:3521117-3521253:-1:exon
so has part: feature:3520270-3520466:-1:exon
so has part: feature:3517238-3517450:-1:exon
so has part: feature:3515991-3516177:-1:exon
so has part: feature:3512647-3512871:-1:exon
so has part: feature:3510650-3510812:-1:exon
so has part: feature:3507431-3507643:-1:exon
so has part: feature:3506162-3506333:-1:exon
so has part: feature:3504015-3505630:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3539137-3540230:-1:exon

position:3539137:-1
position: 3539137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3522140-3522310:-1:exon

position:3522140:-1
position: 3522140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3522310:-1
position: 3522310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3521117-3521253:-1:exon

position:3521117:-1
position: 3521117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3521253:-1
position: 3521253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3520270-3520466:-1:exon

position:3520270:-1
position: 3520270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3520466:-1
position: 3520466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3517238-3517450:-1:exon

position:3517238:-1
position: 3517238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3517450:-1
position: 3517450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3515991-3516177:-1:exon

position:3515991:-1
position: 3515991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3516177:-1
position: 3516177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3512647-3512871:-1:exon

position:3512647:-1
position: 3512647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3512871:-1
position: 3512871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3510650-3510812:-1:exon

position:3510650:-1
position: 3510650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3510812:-1
position: 3510812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3507431-3507643:-1:exon

position:3507431:-1
position: 3507431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3507643:-1
position: 3507643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3506162-3506333:-1:exon

position:3506162:-1
position: 3506162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3506333:-1
position: 3506333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3504015-3505630:-1:exon

position:3505630:-1
position: 3505630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KLHL4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: KLHL4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kelch-like protein 4
translation: MSVSGKKEFDVKQILRLRWRWFSHPSQGSAGPGGCHQQEGYEHRGTPVQNRLKSHSRDRNGLKKNSSPVHHNILAPVPGPTPVHHRSIHSWHQQNLIEQLRSSEDTPKASTEENSGKEDPSKPTQELQMITEQNADESAERLSTTSSSLGMSTNGSDEYFQSMNHAEQTFRKMENYLQQKQLCDVLLIAGDQKIPAHRLVLSAVSDYFAAMFTNDVREAKQEEIKMEGVDPEALKALVRYAYTGILELKEDTIESLLAAACLLQLSQVIEVCCNFLMKQLHPSNCLGIRSFGDAQGCTELLKVAHTYTMEHFIEVIKNQEFLLLPANEIAKLLSSDDINVPDEEAIFQALMMWVRHDLQNRQRDLGMLLSYIRLPLLPPQLLADLENSPMFADDLECQKLLMEAMKYHLLPERRSMMQSPRTKPRKSTVGALYAVGGMDATKGTTTIEKYDLRTNSWIQIGTMNGRRLQFGVAVIDNKLYIVGGRDGLKTSNIVECFNPVTKAWTVMPPMSTHRHGLGVAMLEGPMYAVGGHDGWSYLNTVERWDPQARQWNYVASMSTPRSTVGVAALNSKLYAVGGRDGSSCLKSMECFDPHTNKWSLCASMSMRRGGVGVATYNGFLYAVGGHDAPASNHCSRLSDCVERYDPKTDAWTTVAPLSVPRDAVGICPLGDRLYAVGGYDGHSYLDTVESYDAQNNEWTEEVPVNIGRAGACVVVVKLP
SIO_010081: KLHL4
subclass of: SO_0000673
so part of: KLHL4
location: complement(join(3505571..3505630,3506162..3506333,3507431..3507643,3510650..3510812,3512647..3512871,3515991..3516177,3517238..3517450,3520270..3520466,3521117..3521253,3522140..3522310,3539137..3539558))
location: region:3505571-3539558:-1
so has part: feature:3539137-3539558:-1:exon
so has part: feature:3522140-3522310:-1:exon
so has part: feature:3521117-3521253:-1:exon
so has part: feature:3520270-3520466:-1:exon
so has part: feature:3517238-3517450:-1:exon
so has part: feature:3515991-3516177:-1:exon
so has part: feature:3512647-3512871:-1:exon
so has part: feature:3510650-3510812:-1:exon
so has part: feature:3507431-3507643:-1:exon
so has part: feature:3506162-3506333:-1:exon
so has part: feature:3505571-3505630:-1:exon

XP_002192445.5
type: Protein
SIO_000068: ncbiprotein

position:3505571:-1
position: 3505571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3539558:-1
position: 3539558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3539137-3539558:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3522140-3522310:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3521117-3521253:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3520270-3520466:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3517238-3517450:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3515991-3516177:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3512647-3512871:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3510650-3510812:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3507431-3507643:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3506162-3506333:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3505571-3505630:-1:exon

LOC115495208
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC115495208
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3547510..3665068
location: region:3547510-3665068:1
so has part: feature:3547510-3665068:1:exon
subclass of: SO_0000011

115495208
type: Gene
SIO_000068: ncbigene

position:3547510:1
position: 3547510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3665068:1
position: 3665068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3547510-3665068:1:exon

LOC115495208
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC115495208
product: uncharacterized LOC115495208, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XR_003960342.3
SIO_010081: LOC115495208
subclass of: SO_0000673
so part of: LOC115495208
location: join(3547510..3548088,3562560..3562620,3656439..3665068)
location: region:3547510-3665068:1
so has part: feature:3547510-3548088:1:exon
so has part: feature:3562560-3562620:1:exon
so has part: feature:3656439-3665068:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3547510-3548088:1:exon

position:3548088:1
position: 3548088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3562560-3562620:1:exon

position:3562560:1
position: 3562560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3562620:1
position: 3562620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3656439-3665068:1:exon

position:3656439:1
position: 3656439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115495208
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC115495208
product: uncharacterized LOC115495208, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_005980362.1
SIO_010081: LOC115495208
subclass of: SO_0000673
so part of: LOC115495208
location: join(3547510..3547953,3557864..3557934,3562560..3562620,3656439..3665068)
location: region:3547510-3665068:1
so has part: feature:3547510-3547953:1:exon
so has part: feature:3557864-3557934:1:exon
so has part: feature:3562560-3562620:1:exon
so has part: feature:3656439-3665068:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3547510-3547953:1:exon

position:3547953:1
position: 3547953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3557864-3557934:1:exon

position:3557864:1
position: 3557864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3557934:1
position: 3557934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3562560-3562620:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3656439-3665068:1:exon

LOC115495208
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC115495208
product: uncharacterized LOC115495208, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XR_003960343.3
SIO_010081: LOC115495208
subclass of: SO_0000673
so part of: LOC115495208
location: join(3547510..3547953,3562560..3562620,3656439..3665068)
location: region:3547510-3665068:1
so has part: feature:3547510-3547953:1:exon
so has part: feature:3562560-3562620:1:exon
so has part: feature:3656439-3665068:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3547510-3547953:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3562560-3562620:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3656439-3665068:1:exon

LOC115495208
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC115495208
product: uncharacterized LOC115495208, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005980364.1
SIO_010081: LOC115495208
subclass of: SO_0000673
so part of: LOC115495208
location: join(3547510..3547888,3547989..3548088,3562560..3562620,3656439..3665068)
location: region:3547510-3665068:1
so has part: feature:3547510-3547888:1:exon
so has part: feature:3547989-3548088:1:exon
so has part: feature:3562560-3562620:1:exon
so has part: feature:3656439-3665068:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3547510-3547888:1:exon

position:3547888:1
position: 3547888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3547989-3548088:1:exon

position:3547989:1
position: 3547989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3562560-3562620:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3656439-3665068:1:exon

LOC115495208
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC115495208
product: uncharacterized LOC115495208, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_005980361.1
SIO_010081: LOC115495208
subclass of: SO_0000673
so part of: LOC115495208
location: join(3608141..3611147,3612164..3612263,3613284..3623625,3656439..3665068)
location: region:3608141-3665068:1
so has part: feature:3608141-3611147:1:exon
so has part: feature:3612164-3612263:1:exon
so has part: feature:3613284-3623625:1:exon
so has part: feature:3656439-3665068:1:exon

position:3608141:1
position: 3608141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3608141-3611147:1:exon

position:3611147:1
position: 3611147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3612164-3612263:1:exon

position:3612164:1
position: 3612164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3612263:1
position: 3612263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3613284-3623625:1:exon

position:3613284:1
position: 3613284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3623625:1
position: 3623625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3656439-3665068:1:exon

LOC115495208
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC115495208
product: uncharacterized LOC115495208, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005980363.1
SIO_010081: LOC115495208
subclass of: SO_0000673
so part of: LOC115495208
location: join(3608141..3611147,3612164..3612263,3613489..3623625,3656439..3665068)
location: region:3608141-3665068:1
so has part: feature:3608141-3611147:1:exon
so has part: feature:3612164-3612263:1:exon
so has part: feature:3613489-3623625:1:exon
so has part: feature:3656439-3665068:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3608141-3611147:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3612164-3612263:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3613489-3623625:1:exon

position:3613489:1
position: 3613489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3656439-3665068:1:exon

LOC115495208
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC115495208
product: uncharacterized LOC115495208, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XR_004367862.2
SIO_010081: LOC115495208
subclass of: SO_0000673
so part of: LOC115495208
location: join(3608141..3611147,3612164..3612263,3656439..3665068)
location: region:3608141-3665068:1
so has part: feature:3608141-3611147:1:exon
so has part: feature:3612164-3612263:1:exon
so has part: feature:3656439-3665068:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3608141-3611147:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3612164-3612263:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3656439-3665068:1:exon

LOC115495210
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC115495210
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3670245..3675353
location: region:3670245-3675353:1
so has part: feature:3670245-3675353:1:exon
subclass of: SO_0000011

115495210
type: Gene
SIO_000068: ncbigene

position:3670245:1
position: 3670245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3675353:1
position: 3675353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3670245-3675353:1:exon

LOC115495210
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC115495210
product: uncharacterized LOC115495210
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XR_003960347.3
SIO_010081: LOC115495210
subclass of: SO_0000673
so part of: LOC115495210
location: join(3670245..3671751,3674013..3675353)
location: region:3670245-3675353:1
so has part: feature:3670245-3671751:1:exon
so has part: feature:3674013-3675353:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3670245-3671751:1:exon

position:3671751:1
position: 3671751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3674013-3675353:1:exon

position:3674013:1
position: 3674013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DACH2
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: DACH2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3678466..3919865)
location: region:3678466-3919865:-1
so has part: feature:3678466-3919865:-1:exon
subclass of: SO_0000010

100225039
type: Gene
SIO_000068: ncbigene

position:3678466:-1
position: 3678466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3919865:-1
position: 3919865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3678466-3919865:-1:exon

DACH2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: DACH2
product: dachshund family transcription factor 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 6 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 49 samples with support for all annotated introns
transcript id: XM_030272416.3
SIO_010081: DACH2
subclass of: SO_0000673
so part of: DACH2
location: complement(join(3678466..3679475,3687306..3687371,3690396..3690539,3691884..3692031,3692545..3692690,3722076..3722156,3724137..3724272,3735088..3735260,3738902..3739057,3763501..3763632,3801450..3801565,3919285..3919865))
location: region:3678466-3919865:-1
so has part: feature:3919285-3919865:-1:exon
so has part: feature:3801450-3801565:-1:exon
so has part: feature:3763501-3763632:-1:exon
so has part: feature:3738902-3739057:-1:exon
so has part: feature:3735088-3735260:-1:exon
so has part: feature:3724137-3724272:-1:exon
so has part: feature:3722076-3722156:-1:exon
so has part: feature:3692545-3692690:-1:exon
so has part: feature:3691884-3692031:-1:exon
so has part: feature:3690396-3690539:-1:exon
so has part: feature:3687306-3687371:-1:exon
so has part: feature:3678466-3679475:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3919285-3919865:-1:exon

position:3919285:-1
position: 3919285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3801450-3801565:-1:exon

position:3801450:-1
position: 3801450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3801565:-1
position: 3801565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3763501-3763632:-1:exon

position:3763501:-1
position: 3763501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3763632:-1
position: 3763632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3738902-3739057:-1:exon

position:3738902:-1
position: 3738902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3739057:-1
position: 3739057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3735088-3735260:-1:exon

position:3735088:-1
position: 3735088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3735260:-1
position: 3735260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3724137-3724272:-1:exon

position:3724137:-1
position: 3724137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3724272:-1
position: 3724272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3722076-3722156:-1:exon

position:3722076:-1
position: 3722076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3722156:-1
position: 3722156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3692545-3692690:-1:exon

position:3692545:-1
position: 3692545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3692690:-1
position: 3692690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3691884-3692031:-1:exon

position:3691884:-1
position: 3691884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3692031:-1
position: 3692031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3690396-3690539:-1:exon

position:3690396:-1
position: 3690396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3690539:-1
position: 3690539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3687306-3687371:-1:exon

position:3687306:-1
position: 3687306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3687371:-1
position: 3687371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3678466-3679475:-1:exon

position:3679475:-1
position: 3679475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DACH2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: DACH2
product: dachshund family transcription factor 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
transcript id: XM_030272413.3
SIO_010081: DACH2
subclass of: SO_0000673
so part of: DACH2
location: complement(join(3678466..3679475,3687301..3687371,3690396..3690539,3691884..3692031,3692545..3692690,3722076..3722156,3724137..3724272,3735088..3735260,3738902..3739057,3763501..3763632,3801450..3801565,3919285..3919865))
location: region:3678466-3919865:-1
so has part: feature:3919285-3919865:-1:exon
so has part: feature:3801450-3801565:-1:exon
so has part: feature:3763501-3763632:-1:exon
so has part: feature:3738902-3739057:-1:exon
so has part: feature:3735088-3735260:-1:exon
so has part: feature:3724137-3724272:-1:exon
so has part: feature:3722076-3722156:-1:exon
so has part: feature:3692545-3692690:-1:exon
so has part: feature:3691884-3692031:-1:exon
so has part: feature:3690396-3690539:-1:exon
so has part: feature:3687301-3687371:-1:exon
so has part: feature:3678466-3679475:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3919285-3919865:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3801450-3801565:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3763501-3763632:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3738902-3739057:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3735088-3735260:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3724137-3724272:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3722076-3722156:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3692545-3692690:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3691884-3692031:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3690396-3690539:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3687301-3687371:-1:exon

position:3687301:-1
position: 3687301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3678466-3679475:-1:exon

DACH2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: DACH2
product: dachshund family transcription factor 2, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 48 samples with support for all annotated introns
transcript id: XM_030272418.3
SIO_010081: DACH2
subclass of: SO_0000673
so part of: DACH2
location: complement(join(3678466..3679475,3687306..3687371,3690420..3690539,3691884..3692031,3692545..3692690,3722076..3722156,3724137..3724272,3735088..3735260,3738902..3739057,3763501..3763632,3801450..3801568,3919285..3919865))
location: region:3678466-3919865:-1
so has part: feature:3919285-3919865:-1:exon
so has part: feature:3801450-3801568:-1:exon
so has part: feature:3763501-3763632:-1:exon
so has part: feature:3738902-3739057:-1:exon
so has part: feature:3735088-3735260:-1:exon
so has part: feature:3724137-3724272:-1:exon
so has part: feature:3722076-3722156:-1:exon
so has part: feature:3692545-3692690:-1:exon
so has part: feature:3691884-3692031:-1:exon
so has part: feature:3690420-3690539:-1:exon
so has part: feature:3687306-3687371:-1:exon
so has part: feature:3678466-3679475:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3919285-3919865:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3801450-3801568:-1:exon

position:3801568:-1
position: 3801568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3763501-3763632:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3738902-3739057:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3735088-3735260:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3724137-3724272:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3722076-3722156:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3692545-3692690:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3691884-3692031:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3690420-3690539:-1:exon

position:3690420:-1
position: 3690420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3687306-3687371:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3678466-3679475:-1:exon

DACH2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: DACH2
product: dachshund family transcription factor 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
transcript id: XM_030272415.3
SIO_010081: DACH2
subclass of: SO_0000673
so part of: DACH2
location: complement(join(3678466..3679475,3687301..3687371,3690420..3690539,3691884..3692031,3692545..3692690,3722076..3722156,3724137..3724272,3735088..3735260,3738902..3739057,3763501..3763632,3801450..3801568,3919285..3919865))
location: region:3678466-3919865:-1
so has part: feature:3919285-3919865:-1:exon
so has part: feature:3801450-3801568:-1:exon
so has part: feature:3763501-3763632:-1:exon
so has part: feature:3738902-3739057:-1:exon
so has part: feature:3735088-3735260:-1:exon
so has part: feature:3724137-3724272:-1:exon
so has part: feature:3722076-3722156:-1:exon
so has part: feature:3692545-3692690:-1:exon
so has part: feature:3691884-3692031:-1:exon
so has part: feature:3690420-3690539:-1:exon
so has part: feature:3687301-3687371:-1:exon
so has part: feature:3678466-3679475:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3919285-3919865:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3801450-3801568:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3763501-3763632:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3738902-3739057:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3735088-3735260:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3724137-3724272:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3722076-3722156:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3692545-3692690:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3691884-3692031:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3690420-3690539:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3687301-3687371:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3678466-3679475:-1:exon

DACH2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: DACH2
product: dachshund family transcription factor 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 49 samples with support for all annotated introns
transcript id: XM_030272414.3
SIO_010081: DACH2
subclass of: SO_0000673
so part of: DACH2
location: complement(join(3678466..3679475,3687306..3687371,3690396..3690539,3691884..3692031,3692545..3692690,3722076..3722156,3724137..3724272,3735088..3735260,3738902..3739057,3763501..3763632,3801450..3801568,3919285..3919865))
location: region:3678466-3919865:-1
so has part: feature:3919285-3919865:-1:exon
so has part: feature:3801450-3801568:-1:exon
so has part: feature:3763501-3763632:-1:exon
so has part: feature:3738902-3739057:-1:exon
so has part: feature:3735088-3735260:-1:exon
so has part: feature:3724137-3724272:-1:exon
so has part: feature:3722076-3722156:-1:exon
so has part: feature:3692545-3692690:-1:exon
so has part: feature:3691884-3692031:-1:exon
so has part: feature:3690396-3690539:-1:exon
so has part: feature:3687306-3687371:-1:exon
so has part: feature:3678466-3679475:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3919285-3919865:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3801450-3801568:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3763501-3763632:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3738902-3739057:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3735088-3735260:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3724137-3724272:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3722076-3722156:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3692545-3692690:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3691884-3692031:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3690396-3690539:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3687306-3687371:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3678466-3679475:-1:exon

DACH2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: DACH2
product: dachshund family transcription factor 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
transcript id: XM_030272412.3
SIO_010081: DACH2
subclass of: SO_0000673
so part of: DACH2
location: complement(join(3678466..3679475,3687301..3687371,3690396..3690539,3691884..3692031,3692545..3692690,3722076..3722156,3724137..3724272,3735088..3735260,3738902..3739057,3763501..3763632,3801450..3801568,3919285..3919865))
location: region:3678466-3919865:-1
so has part: feature:3919285-3919865:-1:exon
so has part: feature:3801450-3801568:-1:exon
so has part: feature:3763501-3763632:-1:exon
so has part: feature:3738902-3739057:-1:exon
so has part: feature:3735088-3735260:-1:exon
so has part: feature:3724137-3724272:-1:exon
so has part: feature:3722076-3722156:-1:exon
so has part: feature:3692545-3692690:-1:exon
so has part: feature:3691884-3692031:-1:exon
so has part: feature:3690396-3690539:-1:exon
so has part: feature:3687301-3687371:-1:exon
so has part: feature:3678466-3679475:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3919285-3919865:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3801450-3801568:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3763501-3763632:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3738902-3739057:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3735088-3735260:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3724137-3724272:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3722076-3722156:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3692545-3692690:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3691884-3692031:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3690396-3690539:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3687301-3687371:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3678466-3679475:-1:exon

DACH2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: DACH2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dachshund homolog 2 isoform X2
translation: MAVSAPPVIAATSSGGGAGGSAGLFRADPLYSSPAESPRLTNSLVNTFLSAGGGGAGAGGGGGGNECKMVDLHGVKVASFLVEGQELICLPQVFDLFLKHLVGGLHTVYTKLKRLDISPVVCTVEQVRILRGLGAIQPGVNRCKLITRKDFETLYNDCTNASSRPGRPPKRSLGVAIQENARLLPHGVPGLLSPGLISPTGLTAAAMAEAMKLQKMKLMAMNSLHGSGSQNGTESENEELNSNAGGSESSWDKDKLQSPITTGSQHSIGHPTLSGQSSLGSAHPLSPLQQNHLLTNRIDLPFMMMPHPLLPVSLPPASVAMAMNQMNHLNTIANMAAAAQMHSPLSRAGASVIKERIQDSPSPAPSLEDSQRPGSHASSHPSSSVSSSPSQLDNTPDRIAMLTNSREGELIDQETGTSLKKIQKEKEEVQIAIPIMKPTLDKVQLAGQALPPGFPAPFLFADGLSSVETLLTNIQGLLKVAVDNARVQEKQIQQEKKELKMELCRERELRESLERQLTAELQSRATIQKRLKKEKKAKRKLQEALEFESKRREQVEQALKQATSGDGLRMLNDAGIPDMEIEHNGTQHDSAAMQGAKTEHTSSRPLCTEGTTYC
SIO_010081: DACH2
subclass of: SO_0000673
so part of: DACH2
location: complement(join(3679419..3679475,3687301..3687371,3690396..3690539,3691884..3692031,3692545..3692690,3722076..3722156,3724137..3724272,3735088..3735260,3738902..3739057,3763501..3763632,3801450..3801565,3919285..3919769))
location: region:3679419-3919769:-1
so has part: feature:3919285-3919769:-1:exon
so has part: feature:3801450-3801565:-1:exon
so has part: feature:3763501-3763632:-1:exon
so has part: feature:3738902-3739057:-1:exon
so has part: feature:3735088-3735260:-1:exon
so has part: feature:3724137-3724272:-1:exon
so has part: feature:3722076-3722156:-1:exon
so has part: feature:3692545-3692690:-1:exon
so has part: feature:3691884-3692031:-1:exon
so has part: feature:3690396-3690539:-1:exon
so has part: feature:3687301-3687371:-1:exon
so has part: feature:3679419-3679475:-1:exon

XP_030128273.1
type: Protein
SIO_000068: ncbiprotein

position:3679419:-1
position: 3679419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3919769:-1
position: 3919769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3919285-3919769:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3801450-3801565:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3763501-3763632:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3738902-3739057:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3735088-3735260:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3724137-3724272:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3722076-3722156:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3692545-3692690:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3691884-3692031:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3690396-3690539:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3687301-3687371:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3679419-3679475:-1:exon

DACH2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: DACH2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dachshund homolog 2 isoform X4
translation: MAVSAPPVIAATSSGGGAGGSAGLFRADPLYSSPAESPRLTNSLVNTFLSAGGGGAGAGGGGGGNECKMVDLHGVKVASFLVEGQELICLPQVFDLFLKHLVGGLHTVYTKLKRLDISPVVCTVEQVRILRGLGAIQPGVNRCKLITRKDFETLYNDCTNASSSRPGRPPKRSLGVAIQENARLLPHGVPGLLSPGLISPTGLTAAAMAEAMKLQKMKLMAMNSLHGSGSQNGTESENEELNSNAGGSESSWDKDKLQSPITTGSQHSIGHPTLSGQSSLGSAHPLSPLQQNHLLTNRIDLPFMMMPHPLLPVSLPPASVAMAMNQMNHLNTIANMAAAAQMHSPLSRAGASVIKERIQDSPSPAPSLEDSQRPGSHASSHPSSSVSSSPSQLDNTPDRIAMLTNSREGELIDQETGTSLKKIQKEKEEVQIAIPIMKPTLDKVQLAGQALPPGFPAPFLFADGLSSVETLLTNIQGLLKVAVDNARVQEKQIQQEKKELKMELCRERELRESLERQLTAELQSRATIQKRLKKEKKAKRKLQEALEFESKRREQVEQALKQATSDAGIPDMEIEHNGTQHDSAAMQGAKTEHTSSRPLCTEGTTYC
SIO_010081: DACH2
subclass of: SO_0000673
so part of: DACH2
location: complement(join(3679419..3679475,3687301..3687371,3690420..3690539,3691884..3692031,3692545..3692690,3722076..3722156,3724137..3724272,3735088..3735260,3738902..3739057,3763501..3763632,3801450..3801568,3919285..3919769))
location: region:3679419-3919769:-1
so has part: feature:3919285-3919769:-1:exon
so has part: feature:3801450-3801568:-1:exon
so has part: feature:3763501-3763632:-1:exon
so has part: feature:3738902-3739057:-1:exon
so has part: feature:3735088-3735260:-1:exon
so has part: feature:3724137-3724272:-1:exon
so has part: feature:3722076-3722156:-1:exon
so has part: feature:3692545-3692690:-1:exon
so has part: feature:3691884-3692031:-1:exon
so has part: feature:3690420-3690539:-1:exon
so has part: feature:3687301-3687371:-1:exon
so has part: feature:3679419-3679475:-1:exon

XP_030128275.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3919285-3919769:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3801450-3801568:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3763501-3763632:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3738902-3739057:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3735088-3735260:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3724137-3724272:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3722076-3722156:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3692545-3692690:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3691884-3692031:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3690420-3690539:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3687301-3687371:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3679419-3679475:-1:exon

DACH2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: DACH2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dachshund homolog 2 isoform X1
translation: MAVSAPPVIAATSSGGGAGGSAGLFRADPLYSSPAESPRLTNSLVNTFLSAGGGGAGAGGGGGGNECKMVDLHGVKVASFLVEGQELICLPQVFDLFLKHLVGGLHTVYTKLKRLDISPVVCTVEQVRILRGLGAIQPGVNRCKLITRKDFETLYNDCTNASSSRPGRPPKRSLGVAIQENARLLPHGVPGLLSPGLISPTGLTAAAMAEAMKLQKMKLMAMNSLHGSGSQNGTESENEELNSNAGGSESSWDKDKLQSPITTGSQHSIGHPTLSGQSSLGSAHPLSPLQQNHLLTNRIDLPFMMMPHPLLPVSLPPASVAMAMNQMNHLNTIANMAAAAQMHSPLSRAGASVIKERIQDSPSPAPSLEDSQRPGSHASSHPSSSVSSSPSQLDNTPDRIAMLTNSREGELIDQETGTSLKKIQKEKEEVQIAIPIMKPTLDKVQLAGQALPPGFPAPFLFADGLSSVETLLTNIQGLLKVAVDNARVQEKQIQQEKKELKMELCRERELRESLERQLTAELQSRATIQKRLKKEKKAKRKLQEALEFESKRREQVEQALKQATSGDGLRMLNDAGIPDMEIEHNGTQHDSAAMQGAKTEHTSSRPLCTEGTTYC
SIO_010081: DACH2
subclass of: SO_0000673
so part of: DACH2
location: complement(join(3679419..3679475,3687301..3687371,3690396..3690539,3691884..3692031,3692545..3692690,3722076..3722156,3724137..3724272,3735088..3735260,3738902..3739057,3763501..3763632,3801450..3801568,3919285..3919769))
location: region:3679419-3919769:-1
so has part: feature:3919285-3919769:-1:exon
so has part: feature:3801450-3801568:-1:exon
so has part: feature:3763501-3763632:-1:exon
so has part: feature:3738902-3739057:-1:exon
so has part: feature:3735088-3735260:-1:exon
so has part: feature:3724137-3724272:-1:exon
so has part: feature:3722076-3722156:-1:exon
so has part: feature:3692545-3692690:-1:exon
so has part: feature:3691884-3692031:-1:exon
so has part: feature:3690396-3690539:-1:exon
so has part: feature:3687301-3687371:-1:exon
so has part: feature:3679419-3679475:-1:exon

XP_030128272.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3919285-3919769:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3801450-3801568:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3763501-3763632:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3738902-3739057:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3735088-3735260:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3724137-3724272:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3722076-3722156:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3692545-3692690:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3691884-3692031:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3690396-3690539:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3687301-3687371:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3679419-3679475:-1:exon

DACH2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: DACH2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dachshund homolog 2 isoform X5
translation: MAVSAPPVIAATSSGGGAGGSAGLFRADPLYSSPAESPRLTNSLVNTFLSAGGGGAGAGGGGGGNECKMVDLHGVKVASFLVEGQELICLPQVFDLFLKHLVGGLHTVYTKLKRLDISPVVCTVEQVRILRGLGAIQPGVNRCKLITRKDFETLYNDCTNASSRPGRPPKRSLGVAIQENARLLPHGVPGLLSPGLISPTGLTAAAMAEAMKLQKMKLMAMNSLHGSGSQNGTESENEELNSNAGGSESSWDKDKLQSPITTGSQHSIGHPTLSGQSSLGSAHPLSPLQQNHLLTNRIDLPFMMMPHPLLPVSLPPASVAMAMNQMNHLNTIANMAAAAQMHSPLSRAGASVIKERIQDSPSPAPSLEDSQRPGSHASSHPSSSVSSSPSQLDNTPDRIAMLTNSREGELIDQETGTSLKKIQKEKEEVQIAIPIMKPTLDKVQLAGQALPPGFPAPFLFADGLSSVETLLTNIQGLLKVAVDNARVQEKQIQQEKKELKMELCRERELRESLERQLTAELQSRATIQKRLKKEKKAKRKLQEALEFESKRREQVEQALKQATSGDGLRMLNDAGIPDMEIEHNGTQHDSAAMQENRTYIKPTIMY
SIO_010081: DACH2
subclass of: SO_0000673
so part of: DACH2
location: complement(join(3679438..3679475,3687306..3687371,3690396..3690539,3691884..3692031,3692545..3692690,3722076..3722156,3724137..3724272,3735088..3735260,3738902..3739057,3763501..3763632,3801450..3801565,3919285..3919769))
location: region:3679438-3919769:-1
so has part: feature:3919285-3919769:-1:exon
so has part: feature:3801450-3801565:-1:exon
so has part: feature:3763501-3763632:-1:exon
so has part: feature:3738902-3739057:-1:exon
so has part: feature:3735088-3735260:-1:exon
so has part: feature:3724137-3724272:-1:exon
so has part: feature:3722076-3722156:-1:exon
so has part: feature:3692545-3692690:-1:exon
so has part: feature:3691884-3692031:-1:exon
so has part: feature:3690396-3690539:-1:exon
so has part: feature:3687306-3687371:-1:exon
so has part: feature:3679438-3679475:-1:exon

XP_030128276.1
type: Protein
SIO_000068: ncbiprotein

position:3679438:-1
position: 3679438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3919285-3919769:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3801450-3801565:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3763501-3763632:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3738902-3739057:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3735088-3735260:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3724137-3724272:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3722076-3722156:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3692545-3692690:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3691884-3692031:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3690396-3690539:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3687306-3687371:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3679438-3679475:-1:exon

DACH2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: DACH2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dachshund homolog 2 isoform X6
translation: MAVSAPPVIAATSSGGGAGGSAGLFRADPLYSSPAESPRLTNSLVNTFLSAGGGGAGAGGGGGGNECKMVDLHGVKVASFLVEGQELICLPQVFDLFLKHLVGGLHTVYTKLKRLDISPVVCTVEQVRILRGLGAIQPGVNRCKLITRKDFETLYNDCTNASSSRPGRPPKRSLGVAIQENARLLPHGVPGLLSPGLISPTGLTAAAMAEAMKLQKMKLMAMNSLHGSGSQNGTESENEELNSNAGGSESSWDKDKLQSPITTGSQHSIGHPTLSGQSSLGSAHPLSPLQQNHLLTNRIDLPFMMMPHPLLPVSLPPASVAMAMNQMNHLNTIANMAAAAQMHSPLSRAGASVIKERIQDSPSPAPSLEDSQRPGSHASSHPSSSVSSSPSQLDNTPDRIAMLTNSREGELIDQETGTSLKKIQKEKEEVQIAIPIMKPTLDKVQLAGQALPPGFPAPFLFADGLSSVETLLTNIQGLLKVAVDNARVQEKQIQQEKKELKMELCRERELRESLERQLTAELQSRATIQKRLKKEKKAKRKLQEALEFESKRREQVEQALKQATSDAGIPDMEIEHNGTQHDSAAMQENRTYIKPTIMY
SIO_010081: DACH2
subclass of: SO_0000673
so part of: DACH2
location: complement(join(3679438..3679475,3687306..3687371,3690420..3690539,3691884..3692031,3692545..3692690,3722076..3722156,3724137..3724272,3735088..3735260,3738902..3739057,3763501..3763632,3801450..3801568,3919285..3919769))
location: region:3679438-3919769:-1
so has part: feature:3919285-3919769:-1:exon
so has part: feature:3801450-3801568:-1:exon
so has part: feature:3763501-3763632:-1:exon
so has part: feature:3738902-3739057:-1:exon
so has part: feature:3735088-3735260:-1:exon
so has part: feature:3724137-3724272:-1:exon
so has part: feature:3722076-3722156:-1:exon
so has part: feature:3692545-3692690:-1:exon
so has part: feature:3691884-3692031:-1:exon
so has part: feature:3690420-3690539:-1:exon
so has part: feature:3687306-3687371:-1:exon
so has part: feature:3679438-3679475:-1:exon

XP_030128278.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3919285-3919769:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3801450-3801568:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3763501-3763632:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3738902-3739057:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3735088-3735260:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3724137-3724272:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3722076-3722156:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3692545-3692690:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3691884-3692031:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3690420-3690539:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3687306-3687371:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3679438-3679475:-1:exon

DACH2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: DACH2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dachshund homolog 2 isoform X3
translation: MAVSAPPVIAATSSGGGAGGSAGLFRADPLYSSPAESPRLTNSLVNTFLSAGGGGAGAGGGGGGNECKMVDLHGVKVASFLVEGQELICLPQVFDLFLKHLVGGLHTVYTKLKRLDISPVVCTVEQVRILRGLGAIQPGVNRCKLITRKDFETLYNDCTNASSSRPGRPPKRSLGVAIQENARLLPHGVPGLLSPGLISPTGLTAAAMAEAMKLQKMKLMAMNSLHGSGSQNGTESENEELNSNAGGSESSWDKDKLQSPITTGSQHSIGHPTLSGQSSLGSAHPLSPLQQNHLLTNRIDLPFMMMPHPLLPVSLPPASVAMAMNQMNHLNTIANMAAAAQMHSPLSRAGASVIKERIQDSPSPAPSLEDSQRPGSHASSHPSSSVSSSPSQLDNTPDRIAMLTNSREGELIDQETGTSLKKIQKEKEEVQIAIPIMKPTLDKVQLAGQALPPGFPAPFLFADGLSSVETLLTNIQGLLKVAVDNARVQEKQIQQEKKELKMELCRERELRESLERQLTAELQSRATIQKRLKKEKKAKRKLQEALEFESKRREQVEQALKQATSGDGLRMLNDAGIPDMEIEHNGTQHDSAAMQENRTYIKPTIMY
SIO_010081: DACH2
subclass of: SO_0000673
so part of: DACH2
location: complement(join(3679438..3679475,3687306..3687371,3690396..3690539,3691884..3692031,3692545..3692690,3722076..3722156,3724137..3724272,3735088..3735260,3738902..3739057,3763501..3763632,3801450..3801568,3919285..3919769))
location: region:3679438-3919769:-1
so has part: feature:3919285-3919769:-1:exon
so has part: feature:3801450-3801568:-1:exon
so has part: feature:3763501-3763632:-1:exon
so has part: feature:3738902-3739057:-1:exon
so has part: feature:3735088-3735260:-1:exon
so has part: feature:3724137-3724272:-1:exon
so has part: feature:3722076-3722156:-1:exon
so has part: feature:3692545-3692690:-1:exon
so has part: feature:3691884-3692031:-1:exon
so has part: feature:3690396-3690539:-1:exon
so has part: feature:3687306-3687371:-1:exon
so has part: feature:3679438-3679475:-1:exon

XP_030128274.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3919285-3919769:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3801450-3801568:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3763501-3763632:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3738902-3739057:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3735088-3735260:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3724137-3724272:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3722076-3722156:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3692545-3692690:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3691884-3692031:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3690396-3690539:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3687306-3687371:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3679438-3679475:-1:exon

LOC115495211
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC115495211
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3807090..3812914
location: region:3807090-3812914:1
so has part: feature:3807090-3812914:1:exon
subclass of: SO_0000011

115495211
type: Gene
SIO_000068: ncbigene

position:3807090:1
position: 3807090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3812914:1
position: 3812914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3807090-3812914:1:exon

LOC115495211
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC115495211
product: uncharacterized LOC115495211
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_003960348.3
SIO_010081: LOC115495211
subclass of: SO_0000673
so part of: LOC115495211
location: join(3807090..3807354,3809733..3809880,3810788..3812914)
location: region:3807090-3812914:1
so has part: feature:3807090-3807354:1:exon
so has part: feature:3809733-3809880:1:exon
so has part: feature:3810788-3812914:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3807090-3807354:1:exon

position:3807354:1
position: 3807354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3809733-3809880:1:exon

position:3809733:1
position: 3809733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3809880:1
position: 3809880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3810788-3812914:1:exon

position:3810788:1
position: 3810788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CHM
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: CHM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3937628..3993942
location: region:3937628-3993942:1
so has part: feature:3937628-3993942:1:exon
subclass of: SO_0000010

100225881
type: Gene
SIO_000068: ncbigene

position:3937628:1
position: 3937628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition