Alicycliphilus denitrificans BC plasmid pALIDE02, complete sequence.
type: Entry
definition: Alicycliphilus denitrificans BC plasmid pALIDE02, complete sequence.
sequence version: NC_014911.1
sequence date: 2023-02-22
sequence: sequence
division: CON
label: NC_014911.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN00015356
keyword: GSC:MIGS:2.1
keyword: RefSeq
source: Alicycliphilus denitrificans BC
organism: Alicycliphilus denitrificans BC
taxonomy: Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.
reference: 1
references: 21742888
reference: 2
reference: 3
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP002451.1.\nURL -- http://www.jgi.doe.gov\nJGI Project ID: 4086861\nSource DNA and organism available from Alfons J.M. Stams\n(Fons.Stams@wur.nl)\nContacts: Alfons J.M. Stams (Fons.Stams@wur.nl)\n Tanja Woyke (microbe@cuba.jgi-psf.org)\nAnnotation done by JGI-ORNL and JGI-PGF\nFinishing done by JGI-LANL\nThe JGI and collaborators endorse the principles for the\ndistribution and use of large scale sequencing data adopted by the\nlarger genome sequencing community and urge users of this data to\nfollow them. it is our intention to publish the work of this\nproject in a timely fashion and we welcome collaborative\ninteraction on the project and analysis.\n(http://www.genome.gov/page.cfm?pageID=10506376).\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##MIGS-Data-START##\ninvestigation_type :: bacteria_archaea\nproject_name :: Alicycliphilus denitrificans BC\ncollection_date :: Missing\nlat_lon :: Missing\ndepth :: Missing\nalt_elev :: Missing\ncountry :: Missing\nenvironment :: Missing\nnum_replicons :: 3\nref_biomaterial :: JCM 14587\nbiotic_relationship :: Free living\ntrophic_level :: Missing\nrel_to_oxygen :: Facultative\nisol_growth_condt :: Missing\nsequencing_meth :: WGS\nassembly :: Newbler v. 2.2 (pre-release)\nfinishing_strategy :: Finished\nGOLD Stamp ID :: Gi03280\nGreengenes ID :: 39244\nTemperature Range :: Mesophile\nGram Staining :: Gram-\nDiseases :: None\n##MIGS-Data-END##\n\n##Genome-Assembly-Data-START##\nFinishing Goal :: Finished\nCurrent Finishing Status :: Finished\nAssembly Method :: Newbler v. 2.3\nGenome Coverage :: 30x\nSequencing Technology :: WGS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 02/22/2023 14:43:30\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotatio…

sequence
subclass of: SO_0000155
sequence length: 78982
topology: circular
so has quality: SO_0000988
location: 1..78982
location: region:1-78982:1
RO_0002162: 596153

NC_014911
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN00015356
type: BioSample
SIO_000068: biosample

1
title: Genome sequences of Alicycliphilus denitrificans strains BC and K601T
author: Oosterkamp, M.J.
author: Veuskens, T.
author: Plugge, C.M.
author: Langenhoff, A.A.
author: Gerritse, J.
author: van Berkel, W.J.
author: Pieper, D.H.
author: Junca, H.
author: Goodwin, L.A.
author: Daligault, H.E.
author: Bruce, D.C.
author: Detter, J.C.
author: Tapia, R.
author: Han, C.S.
author: Land, M.L.
author: Hauser, L.J.
author: Smidt, H.
author: Stams, A.J.
journal: J Bacteriol
volume: 193
issue: 18
pages: 5028-5029
year: 2011
pubmed: 21742888

21742888
type: PubMed
SIO_000068: pubmed

2
title: Complete sequence of plasmid2 of Alicycliphilus denitrificans BC
author: Lucas, S.
author: Copeland, A.
author: Lapidus, A.
author: Cheng, J.-F.
author: Goodwin, L.
author: Pitluck, S.
author: Daligault, H.
author: Detter, J.C.
author: Han, C.
author: Tapia, R.
author: Land, M.
author: Hauser, L.
author: Kyrpides, N.
author: Ivanova, N.
author: Mikhailova, N.
author: Oosterkamp, M.J.
author: Veuskens, T.
author: Weelink, S.A.
author: Plugge, C.M.
author: Stams, A.J.M.
author: Woyke, T.
journal: Unpublished

3
title: Direct Submission
author: Lucas, S.
author: Copeland, A.
author: Lapidus, A.
author: Cheng, J.-F.
author: Goodwin, L.
author: Pitluck, S.
author: Daligault, H.
author: Detter, J.C.
author: Han, C.
author: Tapia, R.
author: Land, M.
author: Hauser, L.
author: Kyrpides, N.
author: Ivanova, N.
author: Mikhailova, N.
author: Oosterkamp, M.J.
author: Veuskens, T.
author: Weelink, S.A.
author: Plugge, C.M.
author: Stams, A.J.M.
author: Woyke, T.
journal: Submitted (03-JAN-2011) US DOE Joint Genome Institute, 2800 Mitchell Drive B310, Walnut Creek, CA 94598-1698, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:78982:1
position: 78982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-78982:1:source
so part of: sequence
organism: Alicycliphilus denitrificans BC
mol type: genomic DNA
strain: BC
plasmid: pALIDE02

596153
type: Taxonomy
SIO_000068: taxonomy

ALIDE_RS22545
type: Gene
subclass of: SO_0000704
RO_0002162: 596153
locus tag: ALIDE_RS22545
old locus tag: Alide_4424
so part of: sequence
location: complement(505..4851)
location: region:505-4851:-1
so has part: feature:505-4851:-1:exon
subclass of: SO_0000010

position:505:-1
position: 505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4851:-1
position: 4851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:505-4851:-1:exon

ALIDE_RS22545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 596153
locus tag: ALIDE_RS22545
old locus tag: Alide_4424
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006122509.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: zincin-like metallopeptidase domain-containing protein
translation: MPITKAEAQGVTRAFVRDYPGALELAYKFREDAAELYGPRAAEVPADMKGGYVPKETLHAGRAYRGRVDVPLQNVESAGDLLMTLRHEVLGHYGANTFAPGEKRALLDGLAAARNEPTLKPLWDDVNRRYAGQSLDVRAEEVFALHCEGIEPSQHQVADQVQQRGQQSFTETCIARVRPMQADDLHNIVCMVAQGLRDRSRTQQNFPQFNELFRRDENMEPKKPFHEVVAEKLIEQLKAGTAPWQKPWEPGEPNAYLPMNPTTGKRYKGINAIHLMAQGRSDARWMTYKQAAAVGAQVRKGEKGTPVQYWKFSEEQDKLDDSGRPVLDAKGQPVKETVMLERPRVFFATVFNGEQIDGLPPLQPKKEQTWNAVERAEHILKASGATITHAAGDRAFYRPSTDSITLPERGQFPSSDRYYATALHELGHWTGHASRLDRDLAHPFGSEGYAKEELRAEIASMIVGDELGIGHDPGQHAAYVGSWIKALQDEPLEVFRAAADAEKIHDYVLAFEQKQVQEQDQQQSQAQDEAVAQALAVDIAEVLDNPDVSFSHYQAFQGDTLEDALRSRGLETVGSITGTDPEQFYAVAHDRLSPVFGIDPSHTDTDNAYLERKGLAQEFANMAEQLHLAQQLQQHGEQIVSSIDAEARWSDGQRIFAFHDQDGEPHQVRSLDELNNYAPDQLMALPALTQQQAAVADQEANMTPPTNDQAAALLAAHPADAVQGIEQAAAARRQLAAGEIDGQAFADATRQHLGVELPPDWSGELRIVGVAEQDGQTVDAAQAGIEPQAFQVYARKADAQFGEDAFAFVAGTRTEGQAEALTERLHLVDALGTDNQHERAAKLARVQEERVRRDPNATEEDISAAKEARKTAEASAMLNDSDAQRRAAELERQERERQQAQPQAEKPERQYINVPYKEKDEAKSLGARWDRQQQSWYVPPGTDAAPFAKWAQGAATAAVEPRSAQPAPEAQGEAQKPAQQAQQARQYLAVPYEQRNAAKAAGALWDKAAKSWYVGPRADAAKLERWKPENVQAQQGPAMTPREEFAEAMRSAGLFTGSNAQGDHPIMDGKRHRVPVEGGKKGALDGFYVGHLDGHPAGRIINNKTGTDITWKSKGYALSDQEKAKLQAEAAEKLAQRAVEQDKAQEATAQRVGRQMADLVPIEQPTPYLQAKGIQAQAGVMTDREGQKTYIPAFDAEGKQWTMQYIQEDGTKRFAKDSKKEGCFHPVGGMDALAAAPALVISEGYATAAQVAEAVGHATVAAFDSGNLEAVAKALHAKFPDKPVIIAGDDDRHLVMTHGNNPGREKAEAAAQAVGGKAIFPIFAPAENTYPRDLPAITPDSFKTHLRAEQRLADAAAGKVELAGDEAAKLKASMLSGAQIAALSTMKQHTDFNDLAHKSELGIEGVKRQIGAAISQVQRDEQQHQEQKHVEKKQQQIEQRPQRAARIG
SIO_010081: ALIDE_RS22545
subclass of: SO_0000673
so part of: ALIDE_RS22545
location: complement(505..4851)
location: region:505-4851:-1
so has part: feature:505-4851:-1:exon

WP_013521160.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:505-4851:-1:exon

ALIDE_RS22550
type: Gene
subclass of: SO_0000704
RO_0002162: 596153
locus tag: ALIDE_RS22550
old locus tag: Alide_4425
so part of: sequence
location: complement(4855..5244)
location: region:4855-5244:-1
so has part: feature:4855-5244:-1:exon
subclass of: SO_0000010

position:4855:-1
position: 4855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5244:-1
position: 5244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4855-5244:-1:exon

ALIDE_RS22550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 596153
locus tag: ALIDE_RS22550
old locus tag: Alide_4425
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006122510.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: protein TraD
translation: MNEQTTTNTAAHDEPLAVLPPVDDDAAGREAVREKMADALTPGFQVEFDPDEAERVGAFVEDALSEQDAAASGDDLVEVDGALEPAFLDDEGPSADIPPFITTTNARELYDLRPGETVAQAAARKASEG
SIO_010081: ALIDE_RS22550
subclass of: SO_0000673
so part of: ALIDE_RS22550
location: complement(4855..5244)
location: region:4855-5244:-1
so has part: feature:4855-5244:-1:exon

WP_006122510.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4855-5244:-1:exon

ALIDE_RS22555
type: Gene
subclass of: SO_0000704
RO_0002162: 596153
locus tag: ALIDE_RS22555
old locus tag: Alide_4426
so part of: sequence
location: complement(5266..7329)
location: region:5266-7329:-1
so has part: feature:5266-7329:-1:exon
subclass of: SO_0000010

position:5266:-1
position: 5266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7329:-1
position: 7329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5266-7329:-1:exon

ALIDE_RS22555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 596153
locus tag: ALIDE_RS22555
old locus tag: Alide_4426
EC number: 5.6.2.1
function: involved in conjugative DNA transfer
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011114056.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA topoisomerase III
translation: MRLFIAEKPSVAKAIAGELGATGKGDGFIECGTDKVTWCFGHMLEQADPDEYTPDDVPRGQSGKKVWRVDELPIIPESWILKPKDDAKKQLAVIGKLLKEAKEIVNAGDPDREGQLLVDEVLEHFRNSKPVRRFWVSAQDSVSVKRGLAALKENTTYAGWADAARGRQRADWLIGMNLSRAYTLRAQRGGSRALLTVGRVQTPTLALVVARDREIEAFKAVPYHTIRAVVQHAGGSFAAAWKAKEDQAGLDSEGRLVDTAVADALVAAVKGQPGTIAAYKQEAKKQNQPLAFALSDITALASAKFGYSAEDVLNTCQALYETHKLTSYPRTDCAYLPESQHADAPRVLEAIKHVNPELAGLVDGADPRIKSKTWDDSKITAHHGIVPTMQKGSKAALSERERNIYDLIVRAYLAQFYPLHEYMQTTVGVEIAGENFAASGKVVTRNGWRDVYSQADEEGEKDEDDDSGTQALPSMAQGDAVTCTDATRKDAKTKPPARFTEGTLIRAMENIHKFVSDAEHKKMLREGDGIGTSATRASIISELKRREFLAVKGKQIISTTLGRSVIDALPEVVKSPVLTALYERMLKGVEQGTAALDAFITKQETFIRDQVAKANSGAVTIAGGKEAAPVSSLHKCMACGSGLSRRPSKKKGQFWWGCSNFPTCKQTYPDLKGRPDYSKGRNGPASE
SIO_010081: ALIDE_RS22555
subclass of: SO_0000673
so part of: ALIDE_RS22555
location: complement(5266..7329)
location: region:5266-7329:-1
so has part: feature:5266-7329:-1:exon

WP_011114056.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5266-7329:-1:exon

ALIDE_RS22560
type: Gene
subclass of: SO_0000704
RO_0002162: 596153
gene: traF
locus tag: ALIDE_RS22560
old locus tag: Alide_4427
so part of: sequence
location: complement(7341..7877)
location: region:7341-7877:-1
so has part: feature:7341-7877:-1:exon
subclass of: SO_0000010

position:7341:-1
position: 7341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7877:-1
position: 7877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7341-7877:-1:exon

ALIDE_RS22560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 596153
gene: traF
locus tag: ALIDE_RS22560
old locus tag: Alide_4427
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000086826.1
GO component: GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO function: GO:0008233 - peptidase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugative transfer signal peptidase TraF
translation: MSRILKRIAAGVVIAGVAALLLAAGGYAAGARVNTTKSIPVGLYWTSSAPVEKGAYVLFCPPQLGVFDDAKERGYIGAGFCQGGYGYMMKRVLAAKDDAVAVADDGVRVNGELLPLSAPIKADKAGRPLPRYQSNSYTLGNSEVLLMSDVSATSFDGRYFGPINRSQIKTVIRPVITW
SIO_010081: ALIDE_RS22560
subclass of: SO_0000673
so part of: ALIDE_RS22560
location: complement(7341..7877)
location: region:7341-7877:-1
so has part: feature:7341-7877:-1:exon

WP_006122512.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7341-7877:-1:exon

ALIDE_RS22565
type: Gene
subclass of: SO_0000704
RO_0002162: 596153
locus tag: ALIDE_RS22565
old locus tag: Alide_4428
so part of: sequence
location: complement(7874..9787)
location: region:7874-9787:-1
so has part: feature:7874-9787:-1:exon
subclass of: SO_0000010

position:7874:-1
position: 7874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9787:-1
position: 9787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7874-9787:-1:exon

ALIDE_RS22565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 596153
locus tag: ALIDE_RS22565
old locus tag: Alide_4428
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011655356.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretory system conjugative DNA transfer family protein
translation: MKIKMNNAVGPQVRTAKPKPSKLLPVLGAASMVGGLQAATQFFAHTFAYHATLGPNVGHVYAPWSILHWTYKWYSQYPDEIMKAGSMGMLVSTVGLLGVAVAKVVTSNSSKANEYLHGSARWAEKKDIQAAGLLPRERNVLEIVTGKAAPTATGVYVGGWQDKDGNFFYLRHSGPEHVLTYAPTRSGKGVGLVVPTLLSWGASSVITDLKGELWALTAGWRQKHAKNKVLRFEPASTSGGVCWNPLDEIRLGTEYEVGDVQNLATLIVDPDGKGLDSHWQKTAFALLVGVILHALYKAKDDGGTATLPSVDAMLADPNRDIGELWMEMATYGHVDGQNHHAIGSAARDMMDRPEEEAGSVLSTAKSYLALYRDPVVARNVSRSDFRIKQLMHEDDPVSLYIVTQPNDKARLRPLVRVMVNMIVRLLADKMDFEGGRPVAHYKHRLLMMLDEFPSLGKLEIMQESLAFVAGYGIKCYLICQDINQLKSRETGYGHDESITSNCHVQNAYPPNRVETAEHLSRLTGQTTVVKEQITTSGRRTAAMLGQVSRTYQEVQRPLLTPDECLRMPGPKKNAQGEIEEAGDMVIYVAGYPAIYGKQPLYFKDPVFSARAAIPAPKVSDRLRAVAQAETEGEGITI
SIO_010081: ALIDE_RS22565
subclass of: SO_0000673
so part of: ALIDE_RS22565
location: complement(7874..9787)
location: region:7874-9787:-1
so has part: feature:7874-9787:-1:exon

WP_000694765.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7874-9787:-1:exon

ALIDE_RS22570
type: Gene
subclass of: SO_0000704
RO_0002162: 596153
locus tag: ALIDE_RS22570
old locus tag: Alide_4429
so part of: sequence
location: complement(9784..12024)
location: region:9784-12024:-1
so has part: feature:9784-12024:-1:exon
subclass of: SO_0000010

position:9784:-1
position: 9784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12024:-1
position: 12024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9784-12024:-1:exon

ALIDE_RS22570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 596153
locus tag: ALIDE_RS22570
old locus tag: Alide_4429
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011137971.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TraI/MobA(P) family conjugative relaxase
translation: MIAKHVPMRSLGKSDFAGLANYITDAQSKDHRLGHVQATNCEAGSIQDAITEVLATQHTNTRAKGDKTYHLIVSFRAGEQPSADTLRAIEERICVGLGYGEHQRISAVHNDTDNLHIHIAINKIHPTRHTMHEPYYPHRALAELCTALERDYGLERDNHEPRKRGAEGRAADMERHAGVESLVGWIKRECLDEIKGAQSWQELHQVMRDNGMELRVRANGLVFEAGDGTMVKASTVARDLSKPSLEARLGPFEASPERQAQTTAKRQYRKDPIRLRVNTVELYAKYKAEQQSLTTARAQALERARHRKDRLIEAAKRSNRLRRATIKVVGEGRANKKLLYAQASKALRSELQAINKQFQQERTALYAEHSRRTWADWLKKEAQHGGADALAALRAREAAQGLKGNTIRGEGQAKPGHAPAVDNITKKGTIIFRAGMSAVRDDGDRLQVSREATREGLQEALRLAMQRYGNRITVNGTVEFKAQMIRAAVDSQLPITFTDPALESRRQALLNKENTHERTERPEHRGRTGRGAGGPGQRPAADQHATGAAAVARAGDGRPAAGRGDRADAGLHAATVHRKPDVGRLGRKPPPQSQHRLRALSELGVVRITGGSEVLLPRDVPRHVEQQGTQPDHALRRGISRPGTGVGQTPPGVAAADKYIAEREAKRLKGFDIPKHSRYTAGDGALTFQGTRTIEGQALALLKRGDEVMVMPIDQATARRLTRIAVGDAVSITAKGSIKTSKGRSR
SIO_010081: ALIDE_RS22570
subclass of: SO_0000673
so part of: ALIDE_RS22570
location: complement(9784..12024)
location: region:9784-12024:-1
so has part: feature:9784-12024:-1:exon

WP_011137971.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9784-12024:-1:exon

ALIDE_RS22575
type: Gene
subclass of: SO_0000704
RO_0002162: 596153
gene: traJ
locus tag: ALIDE_RS22575
old locus tag: Alide_4430
so part of: sequence
location: complement(12059..12433)
location: region:12059-12433:-1
so has part: feature:12059-12433:-1:exon
subclass of: SO_0000010

position:12059:-1
position: 12059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12433:-1
position: 12433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12059-12433:-1:exon

ALIDE_RS22575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 596153
gene: traJ
locus tag: ALIDE_RS22575
old locus tag: Alide_4430
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000426567.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer transcriptional regulator TraJ
translation: MENDEKEHGRRRRQHLRVPVFPEEKDEIEANAKRAGVSVARYLRDVGQGYQIKGVMDYQHVRELVRVNGDLGRLGGLLKLWLTDDVRTLQFGEATILALLGRIEATQDEMSRIMKAVVQPRAEP
SIO_010081: ALIDE_RS22575
subclass of: SO_0000673
so part of: ALIDE_RS22575
location: complement(12059..12433)
location: region:12059-12433:-1
so has part: feature:12059-12433:-1:exon

WP_000426567.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12059-12433:-1:exon

ALIDE_RS22580
type: Gene
subclass of: SO_0000704
RO_0002162: 596153
locus tag: ALIDE_RS22580
old locus tag: Alide_4431
so part of: sequence
location: 12807..13205
location: region:12807-13205:1
so has part: feature:12807-13205:1:exon
subclass of: SO_0000010

position:12807:1
position: 12807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13205:1
position: 13205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12807-13205:1:exon

ALIDE_RS22580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 596153
locus tag: ALIDE_RS22580
old locus tag: Alide_4431
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001127128.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TraK family protein
translation: MPKTYPEELAEWVKGREAKKPRQDKHVVAFLAVKSDVQAALDAGYAMKTIWEHMKETGRLRCRYETFTQHVKRYIKAAPVASPPPPATPPDSQPKGAKPEPKAAPPASESKSEPPKIGGFTFDATPKKEDLL
SIO_010081: ALIDE_RS22580
subclass of: SO_0000673
so part of: ALIDE_RS22580
location: 12807..13205
location: region:12807-13205:1
so has part: feature:12807-13205:1:exon

WP_001127128.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12807-13205:1:exon

ALIDE_RS22585
type: Gene
subclass of: SO_0000704
RO_0002162: 596153
locus tag: ALIDE_RS22585
old locus tag: Alide_4432
so part of: sequence
location: 13205..13930
location: region:13205-13930:1
so has part: feature:13205-13930:1:exon
subclass of: SO_0000010

position:13930:1
position: 13930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13205-13930:1:exon

ALIDE_RS22585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 596153
locus tag: ALIDE_RS22585
old locus tag: Alide_4432
function: involved in conjugative DNA transfer
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011304098.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MAKIHMVLQGKGGVGKSMIAATIAQYKAGKGQKPLCIDTDPVNATFEGYKALNVRRLNIMDGDEINTRNFDALVEMIASAEGDVIIDNGASSFVPLSHYLISNQVPALLQDMGHELVVHTVVTGGQALVDTVSGFAQLASQFPAECLFVVWLNPYWGPIEHEGKGFEQLKAYTTNKGRVSAIIQIPALKEETYGRDFAEMLQDRRTFDEALADSALTIMTRQRLKIVKTQLFAQLENAAVL
SIO_010081: ALIDE_RS22585
subclass of: SO_0000673
so part of: ALIDE_RS22585
location: 13205..13930
location: region:13205-13930:1
so has part: feature:13205-13930:1:exon

WP_011114058.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13205-13930:1:exon

ALIDE_RS22590
type: Gene
subclass of: SO_0000704
RO_0002162: 596153
locus tag: ALIDE_RS22590
old locus tag: Alide_4433
so part of: sequence
location: 13930..14370
location: region:13930-14370:1
so has part: feature:13930-14370:1:exon
subclass of: SO_0000010

position:14370:1
position: 14370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13930-14370:1:exon

ALIDE_RS22590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 596153
locus tag: ALIDE_RS22590
old locus tag: Alide_4433
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000718516.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TraM
translation: MAADDKIEELIREIAAKHGIAVGRDDPILILQTINMKLMQDSASAQQEILDAFKSELESIAHRWGDDAKGKAERTLNAALAASKDAMTRGMQEGAKAAAEAVRREVEAVTAQLVAPIREARRVAMMNMVAAGMAVVAAGLALWASL
SIO_010081: ALIDE_RS22590
subclass of: SO_0000673
so part of: ALIDE_RS22590
location: 13930..14370
location: region:13930-14370:1
so has part: feature:13930-14370:1:exon

WP_000718516.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13930-14370:1:exon

ALIDE_RS22595
type: Gene
subclass of: SO_0000704
RO_0002162: 596153
locus tag: ALIDE_RS22595
old locus tag: Alide_4434
so part of: sequence
location: complement(14573..15226)
location: region:14573-15226:-1
so has part: feature:14573-15226:-1:exon
subclass of: SO_0000010

position:14573:-1
position: 14573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15226:-1
position: 15226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14573-15226:-1:exon

ALIDE_RS22595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 596153
locus tag: ALIDE_RS22595
old locus tag: Alide_4434
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000826922.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKRLTIPGSGTESRATKPARVSAPATLGGAAFGASREDTGADLLEAAQAAEIEQQATLEAAPVEQSYPETLALYVQAKHDQVEHIEDRLENLIDRQQARLQQTQASAPGRLSLPGSKRAWQNQQAQQQARLQTLHARLEAVREIKEGMGLHSPKIEELATRKMRAENPELASDWDAMREAARRHELLMRKQEQERKQSQAQERPGRSQSLGLSARPA
SIO_010081: ALIDE_RS22595
subclass of: SO_0000673
so part of: ALIDE_RS22595
location: complement(14573..15226)
location: region:14573-15226:-1
so has part: feature:14573-15226:-1:exon

WP_000826922.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14573-15226:-1:exon

ALIDE_RS22600
type: Gene
subclass of: SO_0000704
RO_0002162: 596153
locus tag: ALIDE_RS22600
old locus tag: Alide_4435
so part of: sequence
location: complement(15255..15602)
location: region:15255-15602:-1
so has part: feature:15255-15602:-1:exon
subclass of: SO_0000010

position:15255:-1
position: 15255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15602:-1
position: 15602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15255-15602:-1:exon

ALIDE_RS22600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 596153
locus tag: ALIDE_RS22600
old locus tag: Alide_4435
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000664557.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKERLLVMNGQRIVQAEKDGAWTNQKVDKAGALKPGIYNLYTAQAADKKQTHAGVIVHADATNVYQQIGKNFVMHARSDFDKVPEIGSAKSISYNAQGKAAVAAEAPKLTRGRSM
SIO_010081: ALIDE_RS22600
subclass of: SO_0000673
so part of: ALIDE_RS22600
location: complement(15255..15602)
location: region:15255-15602:-1
so has part: feature:15255-15602:-1:exon

WP_000664557.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15255-15602:-1:exon

ALIDE_RS22605
type: Gene
subclass of: SO_0000704
RO_0002162: 596153
locus tag: ALIDE_RS22605
old locus tag: Alide_4436
so part of: sequence
location: complement(15773..16804)
location: region:15773-16804:-1
so has part: feature:15773-16804:-1:exon
subclass of: SO_0000010

position:15773:-1
position: 15773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16804:-1
position: 16804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15773-16804:-1:exon

ALIDE_RS22605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 596153
locus tag: ALIDE_RS22605
old locus tag: Alide_4436
function: DNA binding protein involved in transcriptional regulation
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011342948.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA-binding protein
translation: MAISKEQIFAVADELDAAGQNPTLANVRKQLGSGSFTTISEAMNEWRARKASQAAPIREPAPQAITDKLAELGGDLWAVALEMANNRLAAEREALEAVRQETEAARQEAAELADQLTGELDEAKARIAALEAVEAAAKGEADELRGKLAATSERAATAEARAGELRTELDHAHQEARQARAERDKAQERATASADQVEALRADLAAANSRTAEIERRAGELRADLERANQATDQARAAQAEQRKATEAAAAERDQVRAELVKVQAKAEAAEQAHQEQRKAMAAEAHRQAERLTAAQGERDQAKRDAAQAREEAAGLRGRLEALETVMAQGRAADPTSGGRKKT
SIO_010081: ALIDE_RS22605
subclass of: SO_0000673
so part of: ALIDE_RS22605
location: complement(15773..16804)
location: region:15773-16804:-1
so has part: feature:15773-16804:-1:exon

WP_011114059.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15773-16804:-1:exon

ALIDE_RS22610
type: Gene
subclass of: SO_0000704
RO_0002162: 596153
locus tag: ALIDE_RS22610
old locus tag: Alide_4437
so part of: sequence
location: complement(16983..18032)
location: region:16983-18032:-1
so has part: feature:16983-18032:-1:exon
subclass of: SO_0000010

position:16983:-1
position: 16983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18032:-1
position: 18032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16983-18032:-1:exon

ALIDE_RS22610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 596153
locus tag: ALIDE_RS22610
old locus tag: Alide_4437
function: DNA binding protein involved in transcriptional regulation
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010890108.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParB/RepB/Spo0J family partition protein
translation: MSAKTNAKKKEQDKPQSSGLGLDGLGDLAGLLNEQPAANAGGAGPQELPLDLIDEDPHQPRTADNPGFSPESIAEIGETIKARGVKSPISVRENPDAPGRYLINHGARRYRGSKWAHKTTIPAFIDNDYNEADQVIENLQRNELTAREIADFIGRELAKGKKKGEIAKEIGKSPAFVTQHVTLLDLPEPIAEAFNSGRGKDVTVINELVTAYKKNPDEVAAWLADDSQELTRGSVKLLREFLEDKRSHEDGDRDPNTVDALTGKTDAEAGDGEQGPQDDDAKGKKEPKEADPDKLKKAIIQVKHDDRPARLILNRRPPAEGWAWLKYEDDGQEFEADLGTVQLVALLEG
SIO_010081: ALIDE_RS22610
subclass of: SO_0000673
so part of: ALIDE_RS22610
location: complement(16983..18032)
location: region:16983-18032:-1
so has part: feature:16983-18032:-1:exon

WP_011114060.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16983-18032:-1:exon

ALIDE_RS22615
type: Gene
subclass of: SO_0000704
RO_0002162: 596153
locus tag: ALIDE_RS22615
old locus tag: Alide_4438
so part of: sequence
location: complement(18029..18793)
location: region:18029-18793:-1
so has part: feature:18029-18793:-1:exon
subclass of: SO_0000010

position:18029:-1
position: 18029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18793:-1
position: 18793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18029-18793:-1:exon

ALIDE_RS22615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 596153
locus tag: ALIDE_RS22615
old locus tag: Alide_4438
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011114061.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MKTLVTAIQKGGQGKTFATCHLAFDFLERGLRVAVIDLDTQGNASFTLSAYQSGYLASQLFTGDTDDLRYWFGKREGESLALIAADANLANLDKMELSQAAAALRASVAALGEFFDVCLIDTAPSLGVAMTAAVLTADYMLSPIEMEAYSLQGMKKMVAVISNLRKQNPKLRFLGMVPNKVDARKPRHVNNLATLQQAYPQLILPFSIGARDSIAEALGEQMPVWKIKKTAARKATQEVRALADYVFTKMEIAQ
SIO_010081: ALIDE_RS22615
subclass of: SO_0000673
so part of: ALIDE_RS22615
location: complement(18029..18793)
location: region:18029-18793:-1
so has part: feature:18029-18793:-1:exon

WP_000855329.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18029-18793:-1:exon

ALIDE_RS22620
type: Gene
subclass of: SO_0000704
RO_0002162: 596153
locus tag: ALIDE_RS22620
old locus tag: Alide_4439
so part of: sequence
location: complement(18790..19092)
location: region:18790-19092:-1
so has part: feature:18790-19092:-1:exon
subclass of: SO_0000010

position:18790:-1
position: 18790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19092:-1
position: 19092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18790-19092:-1:exon

ALIDE_RS22620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 596153
locus tag: ALIDE_RS22620
old locus tag: Alide_4439
function: regulation of gene expression
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010890110.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcriptional regulator KorA
translation: MKKRLTEAQFQTAIKGLEIGQQTIDIARGVLVDGRPQAEFVTSLGLTKGAVSQAVSRVWAAAGEQLPEGFERVTAVLPEHQAFIVKKWEADAKRKQEPKS
SIO_010081: ALIDE_RS22620
subclass of: SO_0000673
so part of: ALIDE_RS22620
location: complement(18790..19092)
location: region:18790-19092:-1
so has part: feature:18790-19092:-1:exon

WP_010890110.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18790-19092:-1:exon

ALIDE_RS22625
type: Gene
subclass of: SO_0000704
RO_0002162: 596153
locus tag: ALIDE_RS22625
old locus tag: Alide_4440
so part of: sequence
location: complement(19206..19736)
location: region:19206-19736:-1
so has part: feature:19206-19736:-1:exon
subclass of: SO_0000010

position:19206:-1
position: 19206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19736:-1
position: 19736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19206-19736:-1:exon

ALIDE_RS22625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 596153
locus tag: ALIDE_RS22625
old locus tag: Alide_4440
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010890112.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2761 domain-containing protein
translation: MAKQTLPYPPGFVEPTTGRVAVLVREYADSDLNGDAPAYWYSAQSEEWGLDPWRLVEGVDPHVGGGSFDVCFASGGTRTVGPLMTFFLSAAHAAQLIDAKGEELALQRATLAVIADGLGLPAKALRIEAKVEGRPAVFYDQDGATLCACAVDSDHWRQARATAATASAIDKARTNF
SIO_010081: ALIDE_RS22625
subclass of: SO_0000673
so part of: ALIDE_RS22625
location: complement(19206..19736)
location: region:19206-19736:-1
so has part: feature:19206-19736:-1:exon

WP_011117143.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19206-19736:-1:exon

ALIDE_RS22630
type: Gene
subclass of: SO_0000704
RO_0002162: 596153
gene: kleE
locus tag: ALIDE_RS22630
old locus tag: Alide_4441
so part of: sequence
location: complement(19738..20067)
location: region:19738-20067:-1
so has part: feature:19738-20067:-1:exon
subclass of: SO_0000010

position:19738:-1
position: 19738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20067:-1
position: 20067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19738-20067:-1:exon

ALIDE_RS22630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 596153
gene: kleE
locus tag: ALIDE_RS22630
old locus tag: Alide_4441
function: plasmid maintenance
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012478184.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: KleE stable inheritance protein
translation: MSNIVKFPRASKPPAPEPVQPAAPAAAPAAPKAEGRGLVAGLVKFVWVATVLVWPVLKWVLAIITFFQFVRMLYHWNTPGVYAGWSFLAYFAALTAITYFVSIYKPKGL
SIO_010081: ALIDE_RS22630
subclass of: SO_0000673
so part of: ALIDE_RS22630
location: complement(19738..20067)
location: region:19738-20067:-1
so has part: feature:19738-20067:-1:exon

WP_010890113.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19738-20067:-1:exon

ALIDE_RS22635
type: Gene
subclass of: SO_0000704
RO_0002162: 596153
locus tag: ALIDE_RS22635
old locus tag: Alide_4442
so part of: sequence
location: complement(20212..20427)
location: region:20212-20427:-1
so has part: feature:20212-20427:-1:exon
subclass of: SO_0000010

position:20212:-1
position: 20212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20427:-1
position: 20427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20212-20427:-1:exon

ALIDE_RS22635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 596153
locus tag: ALIDE_RS22635
old locus tag: Alide_4442
function: plasmid maintenance
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010890114.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2688 domain-containing protein
translation: MSKGKIEIIETCCRRCGKSIRTLSHTIIGADDAREKFGSICGGCITPEEDNELTEMLLAAAVRRMSGATLQ
SIO_010081: ALIDE_RS22635
subclass of: SO_0000673
so part of: ALIDE_RS22635
location: complement(20212..20427)
location: region:20212-20427:-1
so has part: feature:20212-20427:-1:exon

WP_010890114.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20212-20427:-1:exon

ALIDE_RS22640
type: Gene
subclass of: SO_0000704
RO_0002162: 596153
gene: kleA
locus tag: ALIDE_RS22640
old locus tag: Alide_4443
so part of: sequence
location: complement(20486..20722)
location: region:20486-20722:-1
so has part: feature:20486-20722:-1:exon
subclass of: SO_0000010

position:20486:-1
position: 20486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20722:-1
position: 20722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20486-20722:-1:exon

ALIDE_RS22640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 596153
gene: kleA
locus tag: ALIDE_RS22640
old locus tag: Alide_4443
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015913627.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: stable inheritance protein KleA
translation: MSKNKIMPWVDALPNVEATDFQARRDQIEATMAEAAELVKQAEELRGKAYFAALSLEASAKGEWSSQAVEQAKRSVGW
SIO_010081: ALIDE_RS22640
subclass of: SO_0000673
so part of: ALIDE_RS22640
location: complement(20486..20722)
location: region:20486-20722:-1
so has part: feature:20486-20722:-1:exon

WP_000041932.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20486-20722:-1:exon

ALIDE_RS22645
type: Gene
subclass of: SO_0000704
RO_0002162: 596153
gene: korC
locus tag: ALIDE_RS22645
old locus tag: Alide_4444
so part of: sequence
location: complement(20882..21139)
location: region:20882-21139:-1
so has part: feature:20882-21139:-1:exon
subclass of: SO_0000010

position:20882:-1
position: 20882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21139:-1
position: 21139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20882-21139:-1:exon

ALIDE_RS22645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 596153
gene: korC
locus tag: ALIDE_RS22645
old locus tag: Alide_4444
function: regulation of gene expression
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010890115.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcriptional repressor KorC
translation: MTNDANIRLECLKPAERWAQPSGEEVREVLRLAGLTGGKAAKVLGLGPKGDRTIRRWVGEDTPIPYAAWALLCDYAGLGLIWKEV
SIO_010081: ALIDE_RS22645
subclass of: SO_0000673
so part of: ALIDE_RS22645
location: complement(20882..21139)
location: region:20882-21139:-1
so has part: feature:20882-21139:-1:exon

WP_010890115.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20882-21139:-1:exon

ALIDE_RS22650
type: Gene
subclass of: SO_0000704
RO_0002162: 596153
locus tag: ALIDE_RS22650
old locus tag: Alide_4445
so part of: sequence
location: complement(21156..22361)
location: region:21156-22361:-1
so has part: feature:21156-22361:-1:exon
subclass of: SO_0000010

position:21156:-1
position: 21156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22361:-1
position: 22361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21156-22361:-1:exon

ALIDE_RS22650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 596153
locus tag: ALIDE_RS22650
old locus tag: Alide_4445
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011114068.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAKRTKQPAQAGQDWSAPAAELLAELPADRDGLLAAAVAAVVEIDAAVMRGDGAAAELAGDRYEAIIWKLNGGTNFGCMADDEAAGRVIERHCAAVPGDVPLWGQRGQFLAVAGDVRALVEYEAGYGGPLNAHFQFHAVDLDRPFISATGYRSHFDTARGCMTVDEVARGILTAMLAEKKRPVLIEANYRDRLADAPLPDWLAGLVPPARREPATVTIPPGFVLVDVVLPAHKAFIARRWAAEAAGKVKAARAARSNAKGKAGGRERDPASAETAMRCSTAKADDCKAEAGPVSPEATMPGAGEASCSTARNDDAGPADLVEFTPAPGQRCEIVSVHHPVFAKEIGKRVIIVKVHPDTRQVWAHDDRPVTYKTNRAGRRVVDSDPSCIQSIYGFDQLRLIT
SIO_010081: ALIDE_RS22650
subclass of: SO_0000673
so part of: ALIDE_RS22650
location: complement(21156..22361)
location: region:21156-22361:-1
so has part: feature:21156-22361:-1:exon

WP_011137972.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21156-22361:-1:exon

ALIDE_RS22655
type: Gene
subclass of: SO_0000704
RO_0002162: 596153
locus tag: ALIDE_RS22655
old locus tag: Alide_4446
so part of: sequence
location: complement(22413..22841)
location: region:22413-22841:-1
so has part: feature:22413-22841:-1:exon
subclass of: SO_0000010

position:22413:-1
position: 22413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22841:-1
position: 22841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22413-22841:-1:exon

ALIDE_RS22655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 596153
locus tag: ALIDE_RS22655
old locus tag: Alide_4446
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011137973.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: antirestriction protein
translation: MNTQDQPVTASLVAEAQRLDFLPTYFGPRLMMRGEALVYAWLRRLCERYNGAYWHYYTLSDGGFYLAPDLAERLEIEVDGNGFRGELSADAAGIVATLFALGQLAAEIAGTDAAGALIDRYHFLRGFAAGHPEAAAIYRAID
SIO_010081: ALIDE_RS22655
subclass of: SO_0000673
so part of: ALIDE_RS22655
location: complement(22413..22841)
location: region:22413-22841:-1
so has part: feature:22413-22841:-1:exon

WP_011137973.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22413-22841:-1:exon

ALIDE_RS24880
type: Gene
subclass of: SO_0000704
RO_0002162: 596153
locus tag: ALIDE_RS24880
pseudo: true
so part of: sequence
location: 24060..>24778
location: region:24060-24778:1
so has part: feature:24060-24778:1:exon
subclass of: SO_0000010

position:24060:1
position: 24060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24778:1
position: 24778
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24060-24778:1:exon

ALIDE_RS24880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 596153
locus tag: ALIDE_RS24880
inference: COORDINATES: similar to AA sequence:RefSeq:WP_086558246.1
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS3 family transposase
SIO_010081: ALIDE_RS24880
subclass of: SO_0000673
so part of: ALIDE_RS24880
location: 24060..>24778
location: region:24060-24778:1
so has part: feature:24060-24778:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:24060-24778:1:exon

ALIDE_RS24880
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 596153
locus tag: ALIDE_RS24880
inference: COORDINATES: nucleotide motif:Rfam:14.4:RF01497
inference: COORDINATES: profile:INFERNAL:1.1.1
note: AL1L pseudoknot; Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: ALIDE_RS24880
subclass of: SO_0000673
so part of: ALIDE_RS24880
location: 24341..24457
location: region:24341-24457:1
so has part: feature:24341-24457:1:exon

position:24341:1
position: 24341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24457:1
position: 24457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24341-24457:1:exon

ALIDE_RS22660
type: Gene
subclass of: SO_0000704
RO_0002162: 596153
locus tag: ALIDE_RS22660
old locus tag: Alide_4449
pseudo: true
so part of: sequence
location: complement(24921..>26207)
location: region:24921-26207:-1
so has part: feature:24921-26207:-1:exon
subclass of: SO_0000010

position:24921:-1
position: 24921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26207:-1
position: 26207
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24921-26207:-1:exon

ALIDE_RS22660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 596153
locus tag: ALIDE_RS22660
old locus tag: Alide_4449
inference: COORDINATES: similar to AA sequence:RefSeq:WP_086558120.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: Tn3 family transposase
SIO_010081: ALIDE_RS22660
subclass of: SO_0000673
so part of: ALIDE_RS22660
location: complement(24921..>26207)
location: region:24921-26207:-1
so has part: feature:24921-26207:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:24921-26207:-1:exon

ALIDE_RS23845
type: Gene
subclass of: SO_0000704
RO_0002162: 596153
locus tag: ALIDE_RS23845
old locus tag: Alide_4450
so part of: sequence
location: complement(26517..26945)
location: region:26517-26945:-1
so has part: feature:26517-26945:-1:exon
subclass of: SO_0000010

position:26517:-1
position: 26517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26945:-1
position: 26945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26517-26945:-1:exon

ALIDE_RS23845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 596153
locus tag: ALIDE_RS23845
old locus tag: Alide_4450
EC number: 3.1.2.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008697511.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PaaI family thioesterase
translation: MSKLRSDVSLETLNERGKEYLPGYLGIQVIDLQPNVLRSRMPIQKLHIAPNEFLHAASVVALADTSCGYATIAHLPDGAQSFTTIELKSNHLGTVTEGTVACVATAQHLGRTTQVWDAEVTDEASGRKLALFRCTQMILWPR
SIO_010081: ALIDE_RS23845
subclass of: SO_0000673
so part of: ALIDE_RS23845
location: complement(26517..26945)
location: region:26517-26945:-1
so has part: feature:26517-26945:-1:exon

WP_013521162.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26517-26945:-1:exon

ALIDE_RS22665
type: Gene
subclass of: SO_0000704
RO_0002162: 596153
gene: istA
locus tag: ALIDE_RS22665
old locus tag: Alide_4451
so part of: sequence
location: 27927..29417
location: region:27927-29417:1
so has part: feature:27927-29417:1:exon
subclass of: SO_0000010

position:27927:1
position: 27927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29417:1
position: 29417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27927-29417:1:exon

ALIDE_RS22665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 596153
gene: istA
locus tag: ALIDE_RS22665
old locus tag: Alide_4451
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012584370.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS21 family transposase
translation: MALSPEHEAQILRYYHAERWRIGTIAVQLGLHRDTVARVLAQAGLPRHGPVQRASAIDPYLPFLHETLAQFPRLTAARLYDMVRARGYPGRPDHFRHLIARHRPRPSAEAYLRLRTLPGEQAQVDWGHFGHLTIGRARRPLMAFVMVLSWSRQIYLRFFLDARMENFLRGHVGAFECWGAVPRIALYDNLKSAVLERCGNAIRFHPTLLALAGHYRFEPRPVAVARGNEKGRVERAIRYVREAFFAGCAFADLDDLNAQAQAWCEGAAGARRCPEDASMTVAEAFAAERERLLARPETPFPTDELRAVSAGKTPYVRFDLNDYSIPHTHVRRTLTVLADPLRVRILDGEDVIATHARSYDRRQQIECDAHLEALVAHKHAASAHRATDRLTAAVPACQALLAQAAERGEPLGRTTRALTDLLDRYGAGELAVAVDEALARGVPHPNAVRLALERRREAPPPLGVPLPAHLKTRDVTVRAHPLAGYDRLLEDDHDDA
SIO_010081: ALIDE_RS22665
subclass of: SO_0000673
so part of: ALIDE_RS22665
location: 27927..29417
location: region:27927-29417:1
so has part: feature:27927-29417:1:exon

WP_013521163.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27927-29417:1:exon

ALIDE_RS22670
type: Gene
subclass of: SO_0000704
RO_0002162: 596153
gene: istB
locus tag: ALIDE_RS22670
old locus tag: Alide_4452
so part of: sequence
location: 29404..30162
location: region:29404-30162:1
so has part: feature:29404-30162:1:exon
subclass of: SO_0000010

position:29404:1
position: 29404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30162:1
position: 30162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29404-30162:1:exon

ALIDE_RS22670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 596153
gene: istB
locus tag: ALIDE_RS22670
old locus tag: Alide_4452
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004303614.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS21-like element helper ATPase IstB
translation: MTTPEPLLARARALQLHGVVSHWAECAQAPWITPLIEWEETERARRSLERRLRCAHIGRFKPLADFDWRWPEQCDQAAIAELMTLGFLETATNALLVGPSGLGKTTIAQNIAHQAVLRGHTVLFTTAGQLLGELAALDSDSALRRRLRHYASPTLLVIDEVGYLSYSNRHADLLFELISRRHEKKSTLITTNKSFAEWSEVFPNAACVVALIDRLIHHAEIIALKGPSWRHKEAQERAATNARKRKSARSPA
SIO_010081: ALIDE_RS22670
subclass of: SO_0000673
so part of: ALIDE_RS22670
location: 29404..30162
location: region:29404-30162:1
so has part: feature:29404-30162:1:exon

WP_013521164.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29404-30162:1:exon

ALIDE_RS22675
type: Gene
subclass of: SO_0000704
RO_0002162: 596153
locus tag: ALIDE_RS22675
old locus tag: Alide_4453
so part of: sequence
location: 30159..30371
location: region:30159-30371:1
so has part: feature:30159-30371:1:exon
subclass of: SO_0000010

position:30159:1
position: 30159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30371:1
position: 30371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30159-30371:1:exon

ALIDE_RS22675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 596153
locus tag: ALIDE_RS22675
old locus tag: Alide_4453
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004359146.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKTDHPPSGLLRGLDLLIDADWTPEQARAVIELLDDLRERIWAHYELALFEHYRQDRLTQAELPFDDPSF
SIO_010081: ALIDE_RS22675
subclass of: SO_0000673
so part of: ALIDE_RS22675
location: 30159..30371
location: region:30159-30371:1
so has part: feature:30159-30371:1:exon

WP_004359146.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30159-30371:1:exon

ALIDE_RS22680
type: Gene
subclass of: SO_0000704
RO_0002162: 596153
locus tag: ALIDE_RS22680
old locus tag: Alide_4454
so part of: sequence
location: complement(30577..30861)
location: region:30577-30861:-1
so has part: feature:30577-30861:-1:exon
subclass of: SO_0000010

position:30577:-1
position: 30577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30861:-1
position: 30861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30577-30861:-1:exon

ALIDE_RS22680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 596153
locus tag: ALIDE_RS22680
old locus tag: Alide_4454
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011342942.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family
translation: MRVVWTPEAQQDRADVWDYIAADNSRAAARMDEIFSDAAARLIQHPMLGKPGKIPGTRELIPHESYRLVYQIDGETVWILTLVHTARLWPPVRD
SIO_010081: ALIDE_RS22680
subclass of: SO_0000673
so part of: ALIDE_RS22680
location: complement(30577..30861)
location: region:30577-30861:-1
so has part: feature:30577-30861:-1:exon

WP_013521165.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30577-30861:-1:exon

ALIDE_RS22685
type: Gene
subclass of: SO_0000704
RO_0002162: 596153
locus tag: ALIDE_RS22685
old locus tag: Alide_4455
so part of: sequence
location: complement(30858..31136)
location: region:30858-31136:-1
so has part: feature:30858-31136:-1:exon
subclass of: SO_0000010

position:30858:-1
position: 30858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31136:-1
position: 31136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30858-31136:-1:exon

ALIDE_RS22685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 596153
locus tag: ALIDE_RS22685
old locus tag: Alide_4455
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011342941.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSKQAVFTMKLEPELRAEFMAEAEAAHRPASQVLRELMREFVQRQRESREYDEFLRRKVEAGRASMRAGLGRSNDEVEAEFAARRASVASQA
SIO_010081: ALIDE_RS22685
subclass of: SO_0000673
so part of: ALIDE_RS22685
location: complement(30858..31136)
location: region:30858-31136:-1
so has part: feature:30858-31136:-1:exon

WP_011342941.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30858-31136:-1:exon

ALIDE_RS22690
type: Gene
subclass of: SO_0000704
RO_0002162: 596153
locus tag: ALIDE_RS22690
old locus tag: Alide_4456
so part of: sequence
location: 31375..31968
location: region:31375-31968:1
so has part: feature:31375-31968:1:exon
subclass of: SO_0000010

position:31375:1
position: 31375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31968:1
position: 31968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31375-31968:1:exon

ALIDE_RS22690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 596153
locus tag: ALIDE_RS22690
old locus tag: Alide_4456
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012435588.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MLVGYMRVSSDSDRQSTNLQRDALLAVGVDARHLFEDHASGAKDDRAGLARALEFVRPGDVLVVWKLDRLGRSLSHLLAIVTSLKEKQVAFRSLTENLDTTTPSGEFLFQVFGALAQYERALIQERVVAGLAAARKRGRIGGRPQAITGEKLEAIVAALDGGMSKAAVCRNFGVKRTTLIETLARVGWTGSRGASSR
SIO_010081: ALIDE_RS22690
subclass of: SO_0000673
so part of: ALIDE_RS22690
location: 31375..31968
location: region:31375-31968:1
so has part: feature:31375-31968:1:exon

WP_041716419.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31375-31968:1:exon

ALIDE_RS22695
type: Gene
subclass of: SO_0000704
RO_0002162: 596153
locus tag: ALIDE_RS22695
old locus tag: Alide_4457
so part of: sequence
location: 31965..34994
location: region:31965-34994:1
so has part: feature:31965-34994:1:exon
subclass of: SO_0000010

position:31965:1
position: 31965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34994:1
position: 34994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31965-34994:1:exon

ALIDE_RS22695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 596153
locus tag: ALIDE_RS22695
old locus tag: Alide_4457
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015060658.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Tn3 family transposase
translation: MTTKSERLTVLSDAEQEALYGLPDFDDAQRLEYLALTETELALASSRPGLHAQVYCILQIGYFKAKHAFFRFDWSEVEHDCAFVLSRYFHGESFEHKPISKHEHYTQREWIADLFGYRPWAAEFLAQLAQQAAQTVRRDVMPGFIAAELIVWLNEHKIIRPGYTTLQELVSEALSAERRRLAGLLSEVLDESAKAALGRLLVRDDTLSQLAALKQDAKDFGWRQMAREREKRATLEPLHRIAKALLPKLGVSQQNLLYYASLANFYTVHDLRNLKADQTYLYLLCYAWVRYRQLSDNLVDAMAYHMKQLEDESSAGAKQSFVAEQVRRQQDTPQVGRLLSLYIDDSVPDPTPFGDVRQRAYKIMPRDTLQTTAQRMSVKPVSKLALHWQAVDGLAERIRRHLRPLYVALDLAGTDPGSPWLVALAWAKDVFAKQQRLSQRPLAECPAATLPKRLRPYLLTFDADGKPTGLHADRYEFWLYRQVRKRFQSGELYLDDSLQHRHFSDELVSLEEKAAVLAQIDIPFLRQPLDAQLDALATELRSQWLAFNRELKQGKLTHLEYDKDTQKLTWRKPKGENQKAREKAFYEQLPFCDVADVFRFVNGQCQFLSALTPLQPRYAKKVADADSLMAVIIAQAMNHGNQVMARTSDIPYHVLESAYQQYLRHATLHAANDCISNAIAALPIFPYYSFDLDALYGAVDGQKFGVERPTVKARHSRKYFGRGKGVVAYTLLCNHVPLNGYLIGAHDYEAHHVFDIWYRNTSDIVPTAITGDMHSVNKANFAILHWFGLRFEPRFTDLGDQLKELYSADDPALYDQCLIRPAGRIDRDLIVSEKPNLDQIVATLGLKEMTQGTLIRKLCTYTAPNPTRRAVFEFDKLIRSIYTLRYLRDPQLERNVHRSQNRIESYHHLRSTIAQVGGKKELTGRTDIEIEISNQCARLIANAVIFYNSAILSRLLMKYEVSGNAKAHALLTQISPAAWRHILLNGHYTFQSDGKMIDLDELVAGLELG
SIO_010081: ALIDE_RS22695
subclass of: SO_0000673
so part of: ALIDE_RS22695
location: 31965..34994
location: region:31965-34994:1
so has part: feature:31965-34994:1:exon

WP_013521167.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31965-34994:1:exon

ALIDE_RS23855
type: Gene
subclass of: SO_0000704
RO_0002162: 596153
locus tag: ALIDE_RS23855
old locus tag: Alide_4458
pseudo: true
so part of: sequence
location: complement(<35025..36755)
location: region:35025-36755:-1
so has part: feature:35025-36755:-1:exon
subclass of: SO_0000010

position:35025:-1
position: 35025
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:36755:-1
position: 36755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35025-36755:-1:exon

ALIDE_RS23855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 596153
locus tag: ALIDE_RS23855
old locus tag: Alide_4458
inference: COORDINATES: similar to AA sequence:RefSeq:WP_086558120.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: Tn3-like element IS1071 family transposase
SIO_010081: ALIDE_RS23855
subclass of: SO_0000673
so part of: ALIDE_RS23855
location: complement(<35025..36755)
location: region:35025-36755:-1
so has part: feature:35025-36755:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:35025-36755:-1:exon

ALIDE_RS22705
type: Gene
subclass of: SO_0000704
RO_0002162: 596153
locus tag: ALIDE_RS22705
old locus tag: Alide_4459
pseudo: true
so part of: sequence
location: <36898..>37245
location: region:36898-37245:1
so has part: feature:36898-37245:1:exon
subclass of: SO_0000010

position:36898:1
position: 36898
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:37245:1
position: 37245
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36898-37245:1:exon

ALIDE_RS22705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 596153
locus tag: ALIDE_RS22705
old locus tag: Alide_4459
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611932.1
GO process: GO:0015074 - DNA integration [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: DDE-type integrase/transposase/recombinase
SIO_010081: ALIDE_RS22705
subclass of: SO_0000673
so part of: ALIDE_RS22705
location: <36898..>37245
location: region:36898-37245:1
so has part: feature:36898-37245:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:36898-37245:1:exon

ALIDE_RS22710
type: Gene
subclass of: SO_0000704
RO_0002162: 596153
locus tag: ALIDE_RS22710
old locus tag: Alide_4460
pseudo: true
so part of: sequence
location: 37309..>37569
location: region:37309-37569:1
so has part: feature:37309-37569:1:exon
subclass of: SO_0000010

position:37309:1
position: 37309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37569:1
position: 37569
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37309-37569:1:exon

ALIDE_RS22710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 596153
locus tag: ALIDE_RS22710
old locus tag: Alide_4460
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611206.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: ALIDE_RS22710
subclass of: SO_0000673
so part of: ALIDE_RS22710
location: 37309..>37569
location: region:37309-37569:1
so has part: feature:37309-37569:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:37309-37569:1:exon

ALIDE_RS22715
type: Gene
subclass of: SO_0000704
RO_0002162: 596153
locus tag: ALIDE_RS22715
old locus tag: Alide_4461
so part of: sequence
location: complement(37844..39013)
location: region:37844-39013:-1
so has part: feature:37844-39013:-1:exon
subclass of: SO_0000010

position:37844:-1
position: 37844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39013:-1
position: 39013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37844-39013:-1:exon

ALIDE_RS22715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 596153
locus tag: ALIDE_RS22715
old locus tag: Alide_4461
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020820181.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding protein
translation: MTIEPWADAQLSEDIPRLAQGGESETVEFKRELPKQVRDLAKEIAAFASSSGGRLLLGVADDGSIPGVENAHDPAVRDDLGRRIVGVCQIIDPPVRPQIGWTSANGLGVLVITVEKGSEPLYYVDSRAYIRHGTVYRPATASEVRAALTASMPGEAAEGPKNHPELSALADVLANVRRWSDTDSEMRSLKPWIEDWSADAEVYASKLRDLSVSDWAIESHVNERLEATAEKLDEVAQFRHYLGEGENFNDVCNSAGFAAAELMRDLVDPIEVSDETQRKVLEAIAKLARKLTQMWDRANKEIFDGRVEKAQQETYGIGQQIATWTYFRLSVVPESTLADLRRIGLSLLQLVSMRVYMDGGASLQRIVDDAQTLVKELNANVESFLQFDR
SIO_010081: ALIDE_RS22715
subclass of: SO_0000673
so part of: ALIDE_RS22715
location: complement(37844..39013)
location: region:37844-39013:-1
so has part: feature:37844-39013:-1:exon

WP_013521169.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37844-39013:-1:exon

ALIDE_RS22720
type: Gene
subclass of: SO_0000704
RO_0002162: 596153
locus tag: ALIDE_RS22720
old locus tag: Alide_4462
so part of: sequence
location: complement(39142..39846)
location: region:39142-39846:-1
so has part: feature:39142-39846:-1:exon
subclass of: SO_0000010

position:39142:-1
position: 39142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39846:-1
position: 39846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39142-39846:-1:exon

ALIDE_RS22720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 596153
locus tag: ALIDE_RS22720
old locus tag: Alide_4462
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013521170.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glutathione binding-like protein
translation: MIDLYYWPTPNGHKVTMFLEEAGLEYRIHPVDISAGDQFKPEFLAFSPNNRMPAIIDMQPVDGGEPVTVFESGAILVYLAEKTGRFMPTDLRERKAVLEWLFWQVGGLGPMAGQNHHFGIYAPEKIPYAITRYVNETNRLYGVLDRRLAVQEYLAGETYSIADMATYPWVVPWKRQQQELDEFPSLRRWFDAIRNRPATIRAYARGEPFASRPAVTEEGKKLLFGQTAAGPQAR
SIO_010081: ALIDE_RS22720
subclass of: SO_0000673
so part of: ALIDE_RS22720
location: complement(39142..39846)
location: region:39142-39846:-1
so has part: feature:39142-39846:-1:exon

WP_013521170.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39142-39846:-1:exon

ALIDE_RS22725
type: Gene
subclass of: SO_0000704
RO_0002162: 596153
locus tag: ALIDE_RS22725
old locus tag: Alide_4463
so part of: sequence
location: complement(39843..40457)
location: region:39843-40457:-1
so has part: feature:39843-40457:-1:exon
subclass of: SO_0000010

position:39843:-1
position: 39843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:40457:-1
position: 40457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39843-40457:-1:exon

ALIDE_RS22725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 596153
locus tag: ALIDE_RS22725
old locus tag: Alide_4463
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013521171.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TetR/AcrR family transcriptional regulator
translation: MARPREFDEAVALDAAIQCFWSRGYEATSVRDLADAMGIAGPSLYNTFGDKRTLYRQALEHYVERGFCDRVRRFESQLAPRAAIGAFFDEIIELSLADDQRKGCLIVNSALELAPHDAEFQAALAAVLRDMEAFFYRCVKAGQDAGAINITLPADDLARMLLGLLMGLRVLARSRPEPELLRGLVRPALALLDGAGTSQRRSRK
SIO_010081: ALIDE_RS22725
subclass of: SO_0000673
so part of: ALIDE_RS22725
location: complement(39843..40457)
location: region:39843-40457:-1
so has part: feature:39843-40457:-1:exon

WP_013521171.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39843-40457:-1:exon

ALIDE_RS22730
type: Gene
subclass of: SO_0000704
RO_0002162: 596153
locus tag: ALIDE_RS22730
old locus tag: Alide_4464
so part of: sequence
location: complement(40521..41315)
location: region:40521-41315:-1
so has part: feature:40521-41315:-1:exon
subclass of: SO_0000010

position:40521:-1
position: 40521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41315:-1
position: 41315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40521-41315:-1:exon

ALIDE_RS22730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 596153
locus tag: ALIDE_RS22730
old locus tag: Alide_4464
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013521172.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SDR family NAD(P)-dependent oxidoreductase
translation: MELKNKRVLVTGGSSGIGLALAHALIARGARVVITGRRRSVLDDALRSLDSATGVCADVGSPEGRAATLDQAIQTLGGLDILVNNAGGVRAGRLENTTEADIEQMVIVDLLAPVLLTRAALPALRASGDAMVVNVASGIALVGAPFYATYAAVKAGLARFGEALRRELKGEGIHVLTAYPGGTDTPMMKSNRAGPELGFSREPASAVADAIVAGIEANAFEVIRGGEARAQMIALNRNDPVAVDARFLTLKSALEEAVKDHSAL
SIO_010081: ALIDE_RS22730
subclass of: SO_0000673
so part of: ALIDE_RS22730
location: complement(40521..41315)
location: region:40521-41315:-1
so has part: feature:40521-41315:-1:exon

WP_013521172.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:40521-41315:-1:exon

ALIDE_RS22735
type: Gene
subclass of: SO_0000704
RO_0002162: 596153
locus tag: ALIDE_RS22735
old locus tag: Alide_4465
so part of: sequence
location: complement(41317..42033)
location: region:41317-42033:-1
so has part: feature:41317-42033:-1:exon
subclass of: SO_0000010

position:41317:-1
position: 41317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42033:-1
position: 42033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41317-42033:-1:exon

ALIDE_RS22735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 596153
locus tag: ALIDE_RS22735
old locus tag: Alide_4465
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013521173.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glutathione S-transferase C-terminal domain-containing protein
translation: MIRFYFHPTPNPAKIALFLEETGLAYEALPVDTSKGEQHAPAFRAINPNGKVPAIVDTEGPGGNEVRVFDSTAILIYLAEKTGQLLGTSEDRPELLSWLLFIASGLGPFSGQAVHFQFAAPEGLDYAANRYRREAERHYQVLNDHLSGREFIVGSGFTIADISAWGWLDRASRVRKGAEDPLGPFPELKRWFAGVDARPAVARARALAKSHAFKAINDEETKRALFPSNYPPASAQGV
SIO_010081: ALIDE_RS22735
subclass of: SO_0000673
so part of: ALIDE_RS22735
location: complement(41317..42033)
location: region:41317-42033:-1
so has part: feature:41317-42033:-1:exon

WP_013521173.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41317-42033:-1:exon

ALIDE_RS22740
type: Gene
subclass of: SO_0000704
RO_0002162: 596153
locus tag: ALIDE_RS22740
old locus tag: Alide_4466
so part of: sequence
location: complement(42030..43019)
location: region:42030-43019:-1
so has part: feature:42030-43019:-1:exon
subclass of: SO_0000010

position:42030:-1
position: 42030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43019:-1
position: 43019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42030-43019:-1:exon

ALIDE_RS22740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 596153
locus tag: ALIDE_RS22740
old locus tag: Alide_4466
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013521174.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DMT family transporter
translation: MTQAVDLVQEAVVGPAAASWPQRSSRNVLRGFCWAGLSVTIFAGWFVVTRFSVTRELRLWDVTALRFGIGAVILLPVLLRGKRRLSAKEWREGLVYACLWGLPFVLAVALGLQLTSAGRAAAIAPTLMPVFAGAFAWIFLKEKQGRARWCGYLAIIIGLVFMVAGGVSAHGGMNPMGLIALMTAAAMWAVYTLLFRRSALTPVQAAALICFWSAILFLPIYIFGGLSRLAMASPSEIGLQAVYQGVLMSGVAIVSFNRSVALLGPSAATAIIALIPVVASLAAIPVLGELPSGGECVALAVVVGGVLLAARPARKAAKPSISATTRHTP
SIO_010081: ALIDE_RS22740
subclass of: SO_0000673
so part of: ALIDE_RS22740
location: complement(42030..43019)
location: region:42030-43019:-1
so has part: feature:42030-43019:-1:exon

WP_013521174.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42030-43019:-1:exon

ALIDE_RS22745
type: Gene
subclass of: SO_0000704
RO_0002162: 596153
locus tag: ALIDE_RS22745
old locus tag: Alide_4467
so part of: sequence
location: complement(43016..43678)
location: region:43016-43678:-1
so has part: feature:43016-43678:-1:exon
subclass of: SO_0000010

position:43016:-1
position: 43016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43678:-1
position: 43678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43016-43678:-1:exon

ALIDE_RS22745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 596153
locus tag: ALIDE_RS22745
old locus tag: Alide_4467
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013521175.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peroxiredoxin-like family protein
translation: MAVIDLDRQLQELRKEFARTAPAGRVALYESRIEELRSTFARHAALKEGDRAPDFSLPDAQGGTVSLSAALKQGPVVVTFYRGGWCPYCNLQLRSYQALLPELASFGASMLAISPQLPDASLSTAEREALTFNVLSDLGNDVARQFGLVYPLPQELRDALSSSNKALPSINGDASWELPVPATYVITPNQRISLAFIEVDYRQRLAPQRLLAALQEQAVT
SIO_010081: ALIDE_RS22745
subclass of: SO_0000673
so part of: ALIDE_RS22745
location: complement(43016..43678)
location: region:43016-43678:-1
so has part: feature:43016-43678:-1:exon

WP_013521175.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43016-43678:-1:exon

ALIDE_RS22750
type: Gene
subclass of: SO_0000704
RO_0002162: 596153
locus tag: ALIDE_RS22750
old locus tag: Alide_4468
so part of: sequence
location: complement(44017..44298)
location: region:44017-44298:-1
so has part: feature:44017-44298:-1:exon
subclass of: SO_0000010

position:44017:-1
position: 44017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44298:-1
position: 44298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44017-44298:-1:exon

ALIDE_RS22750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 596153
locus tag: ALIDE_RS22750
old locus tag: Alide_4468
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013521176.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system YafQ family toxin
translation: MRTIDRASAFKRDYKREAKGQHRATLDSDLKPVLVALATDQPLDAKFRDHDLSGDWAGYRECHVKPDLLLIYRKSDADTLRLARLGSHSELFG
SIO_010081: ALIDE_RS22750
subclass of: SO_0000673
so part of: ALIDE_RS22750
location: complement(44017..44298)
location: region:44017-44298:-1
so has part: feature:44017-44298:-1:exon

WP_013521176.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44017-44298:-1:exon

ALIDE_RS22755
type: Gene
subclass of: SO_0000704
RO_0002162: 596153
locus tag: ALIDE_RS22755
old locus tag: Alide_4469
so part of: sequence
location: complement(44285..44551)
location: region:44285-44551:-1
so has part: feature:44285-44551:-1:exon
subclass of: SO_0000010

position:44285:-1
position: 44285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44551:-1
position: 44551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44285-44551:-1:exon

ALIDE_RS22755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 596153
locus tag: ALIDE_RS22755
old locus tag: Alide_4469
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014003226.1
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system RelB/DinJ family antitoxin
translation: MSTADTYVRARIDTSTKERAADALEAMGLSISDAIRLLMLRIADERRMPFDVKAPNATTRKAIAELEAGKGKRFASVDDLMADLHADD
SIO_010081: ALIDE_RS22755
subclass of: SO_0000673
so part of: ALIDE_RS22755
location: complement(44285..44551)
location: region:44285-44551:-1
so has part: feature:44285-44551:-1:exon

WP_013521177.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44285-44551:-1:exon

ALIDE_RS22760
type: Gene
subclass of: SO_0000704
RO_0002162: 596153
gene: trfA
locus tag: ALIDE_RS22760
old locus tag: Alide_4470
so part of: sequence
location: complement(45090..46310)
location: region:45090-46310:-1
so has part: feature:45090-46310:-1:exon
subclass of: SO_0000010

position:45090:-1
position: 45090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46310:-1
position: 46310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45090-46310:-1:exon

ALIDE_RS22760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 596153
gene: trfA
locus tag: ALIDE_RS22760
old locus tag: Alide_4470
function: initiation of replication
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011114072.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid replication initiator TrfA
translation: MQNEFNEQEYRRKLIEGGLSEADATDLAARTAAARRDSGSAGGAFRPAGSLFELPATAGDNEAALPPKLPTPASAAVERSERMAQESAELARTMGLPPEPRTAVNKMAEQIGALAQDKRSSAMATKKRTAGGELAEKVSEAKQTALLKHTKQQIKDMQLSLFDLAPWPDHMRALPNDFGRSAIFTVRNKKVPRAALQGQSIYHVNKDVEITYTGIELRADDDELVFAQVLEYAKRTALGEPVSFTFYELCQDLDWSINGRYYTRAEECLTRLQASAMQFSSQRIGRLESVSLIRRFRVLDRGKRTSRCQVEIDAEIVVLFAGDHYTKFVWEKYRKLSPTARRMFDYFATHKEPYPLKLETFRLMCGSDSTRPKKWREQVGEACDELRENGLVESAWVNDDLVHCKR
SIO_010081: ALIDE_RS22760
subclass of: SO_0000673
so part of: ALIDE_RS22760
location: complement(45090..46310)
location: region:45090-46310:-1
so has part: feature:45090-46310:-1:exon

WP_011114072.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45090-46310:-1:exon

ALIDE_RS22765
type: Gene
subclass of: SO_0000704
RO_0002162: 596153
locus tag: ALIDE_RS22765
old locus tag: Alide_4471
so part of: sequence
location: complement(46357..46698)
location: region:46357-46698:-1
so has part: feature:46357-46698:-1:exon
subclass of: SO_0000010

position:46357:-1
position: 46357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46698:-1
position: 46698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46357-46698:-1:exon

ALIDE_RS22765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 596153
locus tag: ALIDE_RS22765
old locus tag: Alide_4471
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000019167.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: single-stranded DNA-binding protein
translation: MSHNLFQFIGNLTRDTDVRHSENSARAVFDLAVNRVWRNAAGAKQEQTDFFRIKSFGGLAENAGKYLGKGSKVFVQGRIEPTKYEKDGKTEYGFDFIAEEIEYLDTKAPGGGQ
SIO_010081: ALIDE_RS22765
subclass of: SO_0000673
so part of: ALIDE_RS22765
location: complement(46357..46698)
location: region:46357-46698:-1
so has part: feature:46357-46698:-1:exon

WP_000019167.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:46357-46698:-1:exon

ALIDE_RS22770
type: Gene
subclass of: SO_0000704
RO_0002162: 596153
locus tag: ALIDE_RS22770
old locus tag: Alide_4472
so part of: sequence
location: 46812..47174
location: region:46812-47174:1
so has part: feature:46812-47174:1:exon
subclass of: SO_0000010

position:46812:1
position: 46812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47174:1
position: 47174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46812-47174:1:exon

ALIDE_RS22770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 596153
locus tag: ALIDE_RS22770
old locus tag: Alide_4472
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000283041.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcriptional regulator
translation: MYNYIFFTNVLRLLDERHMTKKELSNRSGVSISFLSDLTTGKANPSLKVMEDIAQALETPLPLLLESTDLDKEALDTLAGGKAPRSLPPGFERVAAVLPEHQAFIVKKWGEATRKKLRGS
SIO_010081: ALIDE_RS22770
subclass of: SO_0000673
so part of: ALIDE_RS22770
location: 46812..47174
location: region:46812-47174:1
so has part: feature:46812-47174:1:exon

WP_011137961.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:46812-47174:1:exon

ALIDE_RS22775
type: Gene
subclass of: SO_0000704
RO_0002162: 596153
gene: trbB
locus tag: ALIDE_RS22775
old locus tag: Alide_4473
so part of: sequence
location: 47484..48446
location: region:47484-48446:1
so has part: feature:47484-48446:1:exon
subclass of: SO_0000010

position:47484:1
position: 47484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48446:1
position: 48446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47484-48446:1:exon

ALIDE_RS22775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 596153
gene: trbB
locus tag: ALIDE_RS22775
old locus tag: Alide_4473
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000132020.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P-type conjugative transfer ATPase TrbB
translation: MTDQKPEHNSIKERAKKKLERDMGPELLAALNDPKTVEIMLNADGKLWLERLGEPMKCIGTLRVAQAQAIIETIAGYHGKEVTRSKPILEGELPLDGSRFAGQLPPVVPAPTFAIRKKAVAIFTLDQYVERGIMTAPQREALIAVVRAHRNILVIGGTGSGKTTLVNAIINEMVIQDPTERVFIIEDTGEIQCAAENYVQYHTSIDVNMTALLKTTLRMRPDRILVGEVRGPEALDLLMAWNTGHEGGAATLHANNAKAGLDRLAMLISMHPDSPKPIEPLIGEAVHVVVHIARVEGSRRIQEILEVSGFANGQYITKTL
SIO_010081: ALIDE_RS22775
subclass of: SO_0000673
so part of: ALIDE_RS22775
location: 47484..48446
location: region:47484-48446:1
so has part: feature:47484-48446:1:exon

WP_011137962.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:47484-48446:1:exon

ALIDE_RS22780
type: Gene
subclass of: SO_0000704
RO_0002162: 596153
gene: trbC
locus tag: ALIDE_RS22780
old locus tag: Alide_4474
so part of: sequence
location: 48463..48927
location: region:48463-48927:1
so has part: feature:48463-48927:1:exon
subclass of: SO_0000010

position:48463:1
position: 48463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48927:1
position: 48927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48463-48927:1:exon

ALIDE_RS22780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 596153
gene: trbC
locus tag: ALIDE_RS22780
old locus tag: Alide_4474
function: involved in mating pair formation
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011114046.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer system pilin TrbC
translation: MQATFPAFRLNRNALFYMGLFALLAFFLLAPQHAFASEGTGGSLPYESWLTNLRNSVTGPVAFALSIIGIVVAGGILIFGGELNGFFRTLIFIVLVMALLVGAQNMMSTFFGRGAEIAALTDGALHQVKVAALDVAGFPGEAVMRWAERGHIAG
SIO_010081: ALIDE_RS22780
subclass of: SO_0000673
so part of: ALIDE_RS22780
location: 48463..48927
location: region:48463-48927:1
so has part: feature:48463-48927:1:exon

WP_011114046.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48463-48927:1:exon

ALIDE_RS22785
type: Gene
subclass of: SO_0000704
RO_0002162: 596153
locus tag: ALIDE_RS22785
old locus tag: Alide_4475
so part of: sequence
location: 48931..49242
location: region:48931-49242:1
so has part: feature:48931-49242:1:exon
subclass of: SO_0000010

position:48931:1
position: 48931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49242:1
position: 49242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48931-49242:1:exon

ALIDE_RS22785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 596153
locus tag: ALIDE_RS22785
old locus tag: Alide_4475
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010676131.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TrbD
translation: MALRAIPIRRAGNRENLFMGGDRELVMFSGLLAGALIFSAQEVRATVFGIALWFGALFALRLMAKADPKLRHVYLRHRRYKPYYPARSTPFRDNTPSQGKQYK
SIO_010081: ALIDE_RS22785
subclass of: SO_0000673
so part of: ALIDE_RS22785
location: 48931..49242
location: region:48931-49242:1
so has part: feature:48931-49242:1:exon

WP_001207961.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48931-49242:1:exon

ALIDE_RS22790
type: Gene
subclass of: SO_0000704
RO_0002162: 596153
locus tag: ALIDE_RS22790
old locus tag: Alide_4476
so part of: sequence
location: 49239..51797
location: region:49239-51797:1
so has part: feature:49239-51797:1:exon
subclass of: SO_0000010

position:49239:1
position: 49239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:51797:1
position: 51797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49239-51797:1:exon

ALIDE_RS22790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 596153
locus tag: ALIDE_RS22790
old locus tag: Alide_4476
function: involved in mating pair formation
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011013264.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VirB4 family type IV secretion/conjugal transfer ATPase
translation: MIEAIAIAIAVLGAVLLLILFARIRAVDAELKLKKHRAKDAGLADLLNYAAVVDDGVIVGKNGSFMAAWLYKGDDNASSTEEQREMVSFRINQALAGLGNGWMVHVDAVRRPAPNYSERGVSSFPDSVSFAIDEERRRLFEGLGAMFEGYFVLTVTWFPPVLAQRKFVELMFDDDAVAPDHTARTTGLIAQFKREITSLESRLSSAVKMTRLRGQKVVSEEGREVTHDDFLSWLQFCVTGLHHPVMLPSNPMYLDAVIGGQELWGGVVPKIGRKFIQVVAIEGFPLESTPGVLSALAELPSEYRWSSRFIFMDQHESLKHLDKFRKKWKQKIRGFFDQVFNTNTGSINQDAAAMVGDAEAAIAEVNSGLVAAGYYTSVVVLMDEDRERLAASALLVEKAVNRLAFAARIETINTLDAYLGSLPGHGVENVRRPLINTMNLADLLPTSSIWTGSATAPCPMYPPLSPALMHCVTVGATPFRLNLHVRDLGHTFMFGPTGAGKSTHLGIIAAQLRRYAGMSIYAFDKGMSMYPLAAGIRAATKGKSGLHFTVAADDDRLAFCPLQFLETKGDRAWAMEWIDTILALNGVNTTPAQRNEIGNAIMSMHASGARTLSEFSVTIQDEAIREAIKQYTVDGSMGHLLDAEEDGLSLSDFTVFEIEELMNLGEKFALPVLLYLFRRIERALKGQPSVIILDEAWLMLGHPAFRAKIREWLKVLRKANCLVLMATQSLSDAANSGILDVIVESTATKIFLPNVYARDEDTSALYRRMGLNARQIEILATAIPKRQYYYVSENGRRLYDLALGPMALAFVGASDKESVATIKSLEAKFGHEWVHEWLAGRGLNLNDYLEAA
SIO_010081: ALIDE_RS22790
subclass of: SO_0000673
so part of: ALIDE_RS22790
location: 49239..51797
location: region:49239-51797:1
so has part: feature:49239-51797:1:exon

WP_011114047.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49239-51797:1:exon

ALIDE_RS22795
type: Gene
subclass of: SO_0000704
RO_0002162: 596153
locus tag: ALIDE_RS22795
old locus tag: Alide_4477
so part of: sequence
location: 51794..52576
location: region:51794-52576:1
so has part: feature:51794-52576:1:exon
subclass of: SO_0000010

position:51794:1
position: 51794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52576:1
position: 52576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51794-52576:1:exon

ALIDE_RS22795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 596153
locus tag: ALIDE_RS22795
old locus tag: Alide_4477
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006122481.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TrbF
translation: MSIADTLKGLIFKKPANSAEPRDPRRSKEPLAGGRRAGEAENPYLAARRTWNDHVGGVVSQRQTWQVIGILSLLIALAGVGGVIHIGSQSKFIPYVVEVDKLGQTVAAGPVQAAGKADPRVIHAAVADWMSCARMVSPDVALQRKCVFKAYSMLAPNDPATPKMNEWLNGTPDSSPFKRAEKEMVSVEIKTVIPQTPDTWQVEWVETTRDRQGTLKGQPVTWRALVTTYIAEVTPNTTDEQLRNNPLSIYVRDYSWSRIQ
SIO_010081: ALIDE_RS22795
subclass of: SO_0000673
so part of: ALIDE_RS22795
location: 51794..52576
location: region:51794-52576:1
so has part: feature:51794-52576:1:exon

WP_006122481.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:51794-52576:1:exon

ALIDE_RS22800
type: Gene
subclass of: SO_0000704
RO_0002162: 596153
gene: trbG
locus tag: ALIDE_RS22800
old locus tag: Alide_4478
so part of: sequence
location: 52594..53493
location: region:52594-53493:1
so has part: feature:52594-53493:1:exon
subclass of: SO_0000010

position:52594:1
position: 52594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53493:1
position: 53493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52594-53493:1:exon

ALIDE_RS22800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 596153
gene: trbG
locus tag: ALIDE_RS22800
old locus tag: Alide_4478
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000753228.1
GO process: GO:0009291 - unidirectional conjugation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P-type conjugative transfer protein TrbG
translation: MKKTLSALIVGAAVAVPSLALAAPGDDIADKYFNKTNPTLTAQERAALAIAKRWEAGSATGIKPVAGSGGAIKFVYGAQQPSIVCAVLQVCDVALQPGEQVNSINLGDTARWTVEPAITGSGATEVQHLIIKPMDVGLETSLVVTTNRRSYHFRLRSHRTEYMPQVSFTYPEEAQAKWDAIQRREKQERTDNTLPATGEYLGDLSFDYELSGSASWKPVRVYNDGRKTIIEMPGTMQQTEAPTLLVVRKEGGLFTDDETVLVNYRVQGNRYIVDTVFDHAILIAGVGSSQDRVTISRRK
SIO_010081: ALIDE_RS22800
subclass of: SO_0000673
so part of: ALIDE_RS22800
location: 52594..53493
location: region:52594-53493:1
so has part: feature:52594-53493:1:exon

WP_013521178.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:52594-53493:1:exon

ALIDE_RS22805
type: Gene
subclass of: SO_0000704
RO_0002162: 596153
locus tag: ALIDE_RS22805
old locus tag: Alide_4479
so part of: sequence
location: 53496..53984
location: region:53496-53984:1
so has part: feature:53496-53984:1:exon
subclass of: SO_0000010

position:53496:1
position: 53496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53984:1
position: 53984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53496-53984:1:exon

ALIDE_RS22805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 596153
locus tag: ALIDE_RS22805
old locus tag: Alide_4479
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011798704.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TrbH
translation: MRKIVSLALLALALGLGGCATTSQYGNFVQSAALDQQKLATDAVQQLATLYAPARTRLELQQPTPDPFGQALVKSLRDKGYALLEYAPAGASTQAPASAASQASAPATTAASGGLPLRYVLDQAGDSNLYRLTLMVGNQSITRPYLAQNGTFAPAGYWVRKE
SIO_010081: ALIDE_RS22805
subclass of: SO_0000673
so part of: ALIDE_RS22805
location: 53496..53984
location: region:53496-53984:1
so has part: feature:53496-53984:1:exon

WP_006122479.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:53496-53984:1:exon

ALIDE_RS22810
type: Gene
subclass of: SO_0000704
RO_0002162: 596153
locus tag: ALIDE_RS22810
old locus tag: Alide_4480
so part of: sequence
location: 53989..55410
location: region:53989-55410:1
so has part: feature:53989-55410:1:exon
subclass of: SO_0000010

position:53989:1
position: 53989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55410:1
position: 55410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53989-55410:1:exon

ALIDE_RS22810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 596153
locus tag: ALIDE_RS22810
old locus tag: Alide_4480
function: involved in mating pair formation
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011114050.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TrbI/VirB10 family protein
translation: MTENADQMAPDASPGEVSKKAGVRRVNNMPMYILGGVLLSFVLVMALVAADRAAKQNAPADGPKEKAGNTSMFAKEIAGDKTGGLIEPASPLKVPDMPTGPASAPLEIARPSNPDAPPAPPANPGNPGQPVNDDEAQRIRMAKMQMFGEAVKAKTTVRVDAPRSNGSAPGGPSTYTGTPQTRDEMLNRIAAVQQQIDAQRSNDPTAAYQARLAQIRGMGVGGGGAAPAAGGMGAGGAPQLLQTSTSGGGRNSMAQFGQGGQGDRWKLDSQPEAPRTPFELRAGFVVPATLISGINSDLPGQIMAQVAQDVYDTPTGKHLLIPQGSRLVGSYSSDVAYGQARVLVAWQRIVFPDGKAMDIGAMPGADSAGYAGFHDQVNNHYVRLFGSAFLMSGVTAGITYSQRQNQATNTYGAPSASSALSEALGQQLGQVTAQLIAKNLSISPTLEIRPGYRFNVVVTKDMTFSKPYRSFDY
SIO_010081: ALIDE_RS22810
subclass of: SO_0000673
so part of: ALIDE_RS22810
location: 53989..55410
location: region:53989-55410:1
so has part: feature:53989-55410:1:exon

WP_011114050.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:53989-55410:1:exon

ALIDE_RS22815
type: Gene
subclass of: SO_0000704
RO_0002162: 596153
gene: trbJ
locus tag: ALIDE_RS22815
old locus tag: Alide_4481
so part of: sequence
location: 55431..56195
location: region:55431-56195:1
so has part: feature:55431-56195:1:exon
subclass of: SO_0000010

position:55431:1
position: 55431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:56195:1
position: 56195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55431-56195:1:exon

ALIDE_RS22815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 596153
gene: trbJ
locus tag: ALIDE_RS22815
old locus tag: Alide_4481
function: mating pair formation and entry exclusion
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000802794.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P-type conjugative transfer protein TrbJ
translation: MKPKFLAAKLALVIAVSSTLAVTPVQAGIPVIDGTNLSQNIMTAIESVAQTLKQIEQYSTQLQQYQNQLQNTMAPAAYIWDQAQSTINGLMNAVNTLDYYKTQLGSLDSYIGKFQDVNYYKNSPCFTAAGCSDAERAALRNVAQLASESQKKANDALFKGLDRQQTNLTADAATLQRLQSAAQGAQGQMQAIGYANQLASQQANQLLQIRGLLIAQQNAMATKMQADADKEAQQAAAAAQLRQGSYRASPARTW
SIO_010081: ALIDE_RS22815
subclass of: SO_0000673
so part of: ALIDE_RS22815
location: 55431..56195
location: region:55431-56195:1
so has part: feature:55431-56195:1:exon

WP_010890135.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:55431-56195:1:exon

ALIDE_RS22820
type: Gene
subclass of: SO_0000704
RO_0002162: 596153
gene: trbK
locus tag: ALIDE_RS22820
old locus tag: Alide_4482
so part of: sequence
location: 56205..56432
location: region:56205-56432:1
so has part: feature:56205-56432:1:exon
subclass of: SO_0000010

position:56205:1
position: 56205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:56432:1
position: 56432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56205-56432:1:exon

ALIDE_RS22820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 596153
gene: trbK
locus tag: ALIDE_RS22820
old locus tag: Alide_4482
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000644148.1
GO component: GO:0005886 - plasma membrane [Evidence IEA]
GO process: GO:0009292 - horizontal gene transfer [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: entry exclusion lipoprotein TrbK
translation: MKAIKALSLASAALVAALVAGCDNKPATAPMPEVNDENCKPENIAKIEDKGVQQAFSSLCLRRGGDFKPSPKREW
SIO_010081: ALIDE_RS22820
subclass of: SO_0000673
so part of: ALIDE_RS22820
location: 56205..56432
location: region:56205-56432:1
so has part: feature:56205-56432:1:exon

WP_000644148.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:56205-56432:1:exon

ALIDE_RS22825
type: Gene
subclass of: SO_0000704
RO_0002162: 596153
gene: trbL
locus tag: ALIDE_RS22825
old locus tag: Alide_4483
so part of: sequence
location: 56443..58161
location: region:56443-58161:1
so has part: feature:56443-58161:1:exon
subclass of: SO_0000010

position:56443:1
position: 56443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:58161:1
position: 58161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56443-58161:1:exon

ALIDE_RS22825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 596153
gene: trbL
locus tag: ALIDE_RS22825
old locus tag: Alide_4483
function: involved in mating pair formation
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011114051.1
GO process: GO:0009291 - unidirectional conjugation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P-type conjugative transfer protein TrbL
translation: MRMPANLKTLALPLFVWLAFFAVDAHAAIDNAGVFDSVLDRYQAAASGWAGVITTAATWLFWTLVVISMVWTFGMMALRKADIGEFFAEFVRFTIFTGFFWWALTNGPNFASSIYASLRQLAGNATGLGNALSPSGIVDVGFAIFDKVMDQSSVWSPVDSMAGILMAVAILVILALVGVNMLLLLASGWVLAYGGVFFLGFGGSRWTSDMAINYYKVVLGVAAQLFAMVLLVGIGKTFLDDYYSRMSAGISLKEMGVMLIVVIILLALVNKIPPLIAGIITGASVGGAGIGQFGAGAALGAAGMAAAAAATGGAALAAGAASAAGGASAVMAAFSKANENVSAGTDVMSAFSGGGSSGGGAGGGGDAGTGSTPFAQAAGFSGSSGGGSSSGGGSPSTGSSSGSSKGGDKGGGKADAGGQGSSSTASTGSSADKAAKNEPKPAGGAGQGQQAAPGSTGPGLLASAASALGTAGRIAADAGANLAKGTADVAKAKAASLREAAAERIADTTGGKIAAAIKAQGSGTAENIDVPDQQPAPSFGDNSLAGGPADADPESEVAAFANREQGRDGTTA
SIO_010081: ALIDE_RS22825
subclass of: SO_0000673
so part of: ALIDE_RS22825
location: 56443..58161
location: region:56443-58161:1
so has part: feature:56443-58161:1:exon

WP_011114051.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:56443-58161:1:exon

ALIDE_RS22830
type: Gene
subclass of: SO_0000704
RO_0002162: 596153
locus tag: ALIDE_RS22830
old locus tag: Alide_4484
so part of: sequence
location: 58179..58766
location: region:58179-58766:1
so has part: feature:58179-58766:1:exon
subclass of: SO_0000010

position:58179:1
position: 58179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:58766:1
position: 58766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58179-58766:1:exon

ALIDE_RS22830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 596153
locus tag: ALIDE_RS22830
old locus tag: Alide_4484
function: probable role in the formation of the mating lock (cell-cell contact between donor and recipient) during conjugation on the basis that TrbM shows homology to Haemophilus influenzae adhesin and has an export signal sequence
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010890138.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TrbM/KikA/MpfK family conjugal transfer protein
translation: MKKKLFALAALVAALGSTAGTASAQDVLTGDTRLACEAILCLSSGTRPSECTPSLSRYFNITKRKLSDTIRARLNFLQLCPVASQTPEMQSLVSAISRGAGRCDAQSLNSTLVMWTGGYDDGRTYISNQLPDYCGAYTGHAYTDFASSGTLPRYVGTPERGGYWVEARDYDRALAEYNERIRREDEERRRQSWLN
SIO_010081: ALIDE_RS22830
subclass of: SO_0000673
so part of: ALIDE_RS22830
location: 58179..58766
location: region:58179-58766:1
so has part: feature:58179-58766:1:exon

WP_010890138.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:58179-58766:1:exon

ALIDE_RS22835
type: Gene
subclass of: SO_0000704
RO_0002162: 596153
locus tag: ALIDE_RS22835
old locus tag: Alide_4485
so part of: sequence
location: 58780..59415
location: region:58780-59415:1
so has part: feature:58780-59415:1:exon
subclass of: SO_0000010

position:58780:1
position: 58780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:59415:1
position: 59415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58780-59415:1:exon

ALIDE_RS22835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 596153
locus tag: ALIDE_RS22835
old locus tag: Alide_4485
function: involved in mating pair formation
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011798698.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transglycosylase SLT domain-containing protein
translation: MPFFADLPPQLQERVVCSISAAVKYEVPVNIVLAVAEKEGGKPGQWVRNSNGTHDVGPMQFNTAYLGDLARYGITANDVAAAGCYSFDLAAWRLRMHIRNDKGDLWTKAANYHSRTPQYNAVYRADLMRKASKWADWLEARFVTLDVTKAGATPSTPSQPATVAQRATPAARPAPAPQQAAPAAAAARSVSVAGYVPRTVSFNTSREGSAE
SIO_010081: ALIDE_RS22835
subclass of: SO_0000673
so part of: ALIDE_RS22835
location: 58780..59415
location: region:58780-59415:1
so has part: feature:58780-59415:1:exon

WP_011114052.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:58780-59415:1:exon

ALIDE_RS22840
type: Gene
subclass of: SO_0000704
RO_0002162: 596153
locus tag: ALIDE_RS22840
old locus tag: Alide_4486
so part of: sequence
location: 59444..59710
location: region:59444-59710:1
so has part: feature:59444-59710:1:exon
subclass of: SO_0000010

position:59444:1
position: 59444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:59710:1
position: 59710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:59444-59710:1:exon

ALIDE_RS22840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 596153
locus tag: ALIDE_RS22840
old locus tag: Alide_4486
function: unknown
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011798697.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDKFHAFMMRYTLGVGRLLQAYCKWAEGQAKNQLDLLLLGLGPIFALGLLLWALPAWIGKPIAFVLSLPALYIIFLVLRAYAIRGGRR
SIO_010081: ALIDE_RS22840
subclass of: SO_0000673
so part of: ALIDE_RS22840
location: 59444..59710
location: region:59444-59710:1
so has part: feature:59444-59710:1:exon

WP_010890140.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:59444-59710:1:exon

ALIDE_RS22845
type: Gene
subclass of: SO_0000704
RO_0002162: 596153
locus tag: ALIDE_RS22845
old locus tag: Alide_4487
so part of: sequence
location: 59710..60408
location: region:59710-60408:1
so has part: feature:59710-60408:1:exon
subclass of: SO_0000010

position:60408:1
position: 60408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:59710-60408:1:exon

ALIDE_RS22845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 596153
locus tag: ALIDE_RS22845
old locus tag: Alide_4487
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011798696.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TraX family protein
translation: MKALRIPDGTVEALKWLALVLMTGDHVNKYLFNATLPVLFEAGRVALPLFVFVLAYNLARPGTLERGVYGRTMSRLAMFGALASVPFVALGGLYAGWWPLNVMFTLLVVTATAYLVERGGKLHLAAAGVVFLVGGSSVEYWWPAVAFGLAVWSYTRRPSWAAAAVAVLACAALWFVNRNLWALAALPVLFLASRVDVRVPRLRWAFYAYYPLHLASLWLIRIPMSKAGYLFF
SIO_010081: ALIDE_RS22845
subclass of: SO_0000673
so part of: ALIDE_RS22845
location: 59710..60408
location: region:59710-60408:1
so has part: feature:59710-60408:1:exon

WP_011114053.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:59710-60408:1:exon

ALIDE_RS22850
type: Gene
subclass of: SO_0000704
RO_0002162: 596153
locus tag: ALIDE_RS22850
old locus tag: Alide_4488
so part of: sequence
location: 60424..60855
location: region:60424-60855:1
so has part: feature:60424-60855:1:exon
subclass of: SO_0000010

position:60424:1
position: 60424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:60855:1
position: 60855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60424-60855:1:exon

ALIDE_RS22850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 596153
locus tag: ALIDE_RS22850
old locus tag: Alide_4488
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001665065.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: OmpA family protein
translation: MRKPVLLALSLAFLVSAQSALAAGDAGNFGTPIKSGVSVSFPDSSATFQPTPEALELLADARNAAIIYISGRTSTLRPSAADEALALRRALSARSYLVARGVSPLKIMVNFASAADFVADNSTAEGRRENQRVDIEVVYIPTY
SIO_010081: ALIDE_RS22850
subclass of: SO_0000673
so part of: ALIDE_RS22850
location: 60424..60855
location: region:60424-60855:1
so has part: feature:60424-60855:1:exon

WP_001665065.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:60424-60855:1:exon

ALIDE_RS22855
type: Gene
subclass of: SO_0000704
RO_0002162: 596153
locus tag: ALIDE_RS22855
old locus tag: Alide_4489
so part of: sequence
location: complement(61008..61583)
location: region:61008-61583:-1
so has part: feature:61008-61583:-1:exon
subclass of: SO_0000010

position:61008:-1
position: 61008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:61583:-1
position: 61583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61008-61583:-1:exon

ALIDE_RS22855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 596153
locus tag: ALIDE_RS22855
old locus tag: Alide_4489
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003159185.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MALIGYARVSTAEQDTALQTDALRNAGCERVFEDTASGAKADRPGLADALAYLRDGDVLVVWRLDRLGRSLPHLIETVGKLEARGVGFRSLTENIDTTTPGGRLIFHVFGALGQFERDLIRERTKAGLTAAAARGRKGGRKPVVTADKLQRARELVANGLNVREAAARLKVGKTALYAALQAASSGSAADS
SIO_010081: ALIDE_RS22855
subclass of: SO_0000673
so part of: ALIDE_RS22855
location: complement(61008..61583)
location: region:61008-61583:-1
so has part: feature:61008-61583:-1:exon

WP_001173919.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:61008-61583:-1:exon

ALIDE_RS22860
type: Gene
subclass of: SO_0000704
RO_0002162: 596153
locus tag: ALIDE_RS22860
old locus tag: Alide_4490
so part of: sequence
location: complement(61710..61946)
location: region:61710-61946:-1
so has part: feature:61710-61946:-1:exon
subclass of: SO_0000010

position:61710:-1
position: 61710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:61946:-1
position: 61946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61710-61946:-1:exon

ALIDE_RS22860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 596153
locus tag: ALIDE_RS22860
old locus tag: Alide_4490
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012585400.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system YafQ family toxin
translation: MERTVSGVRCTNDDLKPVLVALATDQPLDVRYRDHDLSGDWAGYRECHIKPDLLLIYRKSDADTLRLARLGSHSELFG
SIO_010081: ALIDE_RS22860
subclass of: SO_0000673
so part of: ALIDE_RS22860
location: complement(61710..61946)
location: region:61710-61946:-1
so has part: feature:61710-61946:-1:exon

WP_013521179.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:61710-61946:-1:exon

ALIDE_RS22865
type: Gene
subclass of: SO_0000704
RO_0002162: 596153
locus tag: ALIDE_RS22865
old locus tag: Alide_4491
so part of: sequence
location: complement(61983..64949)
location: region:61983-64949:-1
so has part: feature:61983-64949:-1:exon
subclass of: SO_0000010

position:61983:-1
position: 61983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64949:-1
position: 64949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61983-64949:-1:exon

ALIDE_RS22865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 596153
locus tag: ALIDE_RS22865
old locus tag: Alide_4491
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014834018.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Tn3 family transposase
translation: MPRRSILSAAERESLLALPDTKDELIRHYTFSESDLSIIRQRRGPANRLGFAVQLCYLRFPGVILGVDEPPFPPLLKLVADQLKVSIESWGKYGQREQTRREHLIELQTVFGFRPFTMSHYRQAVHTLTELAMQTDKGIVLASAFIEHLRRQSVILPALNAVERASAEAITRANRRIYDALAEPLSDMHRRRLDDLLKRRDNGKTTWLAWLRQSPVKPNSRHMLEHIERLKAWQALDLPSGIERSVHQNRLLKIAREGGQMTPADLAKFEPQRRYATLVALTIEGMATVTDEIIDLHDRILGKLFNAAKNKHQQQFQASGKAINAKVRLFGRIGQALIEAKQAGRDPFAAIEAVMSWDAFAESVTEAQKLAQPEDFDFLHRIGESYATLRRYAPEFLAVLKLRAAPAAKDVLDAIEVLRNMNSDNARKVPADAPTDFIKPRWQKLVMTDAGIDRRYYELCALSEMKNALRSGDIWVQGSRQFKDFEDYLVPPAKFASLKQASELPLAVATDCDQYLHERLTLLETQLTTVNRMALANELPDAIITESGLKITPLDAAVPDTAQALIDQTAMALPHVKITELLLEVDEWTGFTRHFAHLKSGDLAKDKNLLLTTILADAINLGLTKMAESCPGTTYAKLAWLQAWHIRDETYGAALAELVNAQFRHPFAEHWGDGTTSSSDGQNFRTGSKAESTGHINPKYGSSPGRTFYTHISDQYAPFHTKVVNVGVRDSTYVLDGLLYHESDLRIEEHYTDTAGFTDHVFALMHLLGFRFAPRIRDLGDTKLYIPKGDAAYETLKPMIGGTLNIKHVRAHWDEILRLATSIKQGTVTASLMLRKLGSYPRQNGLAVALRELGRIERTLFILDWLQSVELRRRVHAGLNKGEARNALARAVFFNRLGEIRDRSFEQQRYRASGLNLVTAAIVLWNTVYLERAANALRGHGQAVDDGLLQYLSPLGWEHINLTGDYLWRSSAKIGAGKFRPLRPLQPA
SIO_010081: ALIDE_RS22865
subclass of: SO_0000673
so part of: ALIDE_RS22865
location: complement(61983..64949)
location: region:61983-64949:-1
so has part: feature:61983-64949:-1:exon

WP_013521180.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:61983-64949:-1:exon

ALIDE_RS22870
type: Gene
subclass of: SO_0000704
RO_0002162: 596153
locus tag: ALIDE_RS22870
old locus tag: Alide_4493
so part of: sequence
location: 65153..66835
location: region:65153-66835:1
so has part: feature:65153-66835:1:exon
subclass of: SO_0000010

position:65153:1
position: 65153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:66835:1
position: 66835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65153-66835:1:exon

ALIDE_RS22870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 596153
locus tag: ALIDE_RS22870
old locus tag: Alide_4493
function: transposition
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013124600.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DDE-type integrase/transposase/recombinase
translation: MATDTAPITEHGVATLPEQAWERARRRAEIIGPLAQSETVGHEAADAAAQALGLSRRQVYVLIRRARLGSGLVTDLALGQSSGGKGKGRLPESVERIIRELLQKRFLTKQKRSLAAFHREVVRACKLQKLRVPARNTVALRIAGLDPREVTHRREGQDAARDLQGVGGVPPPVSAPLEQVQIDHTVIDLIVVDERDRQPIGRPYLTLAIDVFTRCVVGMVVTLEAPSAVSVGLCLVHAACDKRPWLEGLNVEMDWPMSGKPRLLYLDNAAEFKSEALRRGCEQHGIRLDYRPLGQPHYGGIVERIIGTAMQMIHDELPGTTFSNPDQRGEYASEKMAALTLRELERWLTLAVGTYHGSVHNGLLQPPAARWAEAITRTGVPTVITRATAFLVDFLPIIRRTLTRTGFVIDHIHYYADALKPWIARRDRLPAFLIRRDPRDISRIWVLEPEGQHYLEIPYRTLSHPAVTLWEQRQALAKLRQQGREQVDESALFRMIGQMREIVTTAQKATRKARRDADRRQHLKATAPPVKTTPPPDADMADPQADNQPPAKPFDQIEEW
SIO_010081: ALIDE_RS22870
subclass of: SO_0000673
so part of: ALIDE_RS22870
location: 65153..66835
location: region:65153-66835:1
so has part: feature:65153-66835:1:exon

WP_011137965.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:65153-66835:1:exon

ALIDE_RS22875
type: Gene
subclass of: SO_0000704
RO_0002162: 596153
locus tag: ALIDE_RS22875
old locus tag: Alide_4494
so part of: sequence
location: 66838..67746
location: region:66838-67746:1
so has part: feature:66838-67746:1:exon
subclass of: SO_0000010

position:66838:1
position: 66838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:67746:1
position: 67746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66838-67746:1:exon

ALIDE_RS22875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 596153
locus tag: ALIDE_RS22875
old locus tag: Alide_4494
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003155746.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TniB family NTP-binding protein
translation: MDEYPIIDLSHLLPAAQGLARLPADERIQRLRADRWIGYPRAVEALNRLETLYAWPNKQRMPNLLLVGPTNNGKSMIVEKFRRTHPASADADQEHIPVLVVQMPSEPSVIRFYVALLAAMGAPLRPRPRLPEMEQLALALLRKVGVRMLVIDELHNVLAGNSVNRREFLNLLRFLGNELRIPLVGVGTRDAYLVIRSDDQLENRFEPMMLPVWEANDDCCSLLASFAASLPLRRPSSIATLDMARYLLTRSEGTIGELTHLLMAAALAAVESGEEAINHRTLSMADYTGPSERRRQFERELM
SIO_010081: ALIDE_RS22875
subclass of: SO_0000673
so part of: ALIDE_RS22875
location: 66838..67746
location: region:66838-67746:1
so has part: feature:66838-67746:1:exon

WP_011137966.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:66838-67746:1:exon

ALIDE_RS22880
type: Gene
subclass of: SO_0000704
RO_0002162: 596153
locus tag: ALIDE_RS22880
old locus tag: Alide_4495
so part of: sequence
location: 67743..68960
location: region:67743-68960:1
so has part: feature:67743-68960:1:exon
subclass of: SO_0000010

position:67743:1
position: 67743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:68960:1
position: 68960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67743-68960:1:exon

ALIDE_RS22880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 596153
locus tag: ALIDE_RS22880
old locus tag: Alide_4495
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011517528.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TniQ family protein
translation: MKPAPRWPLHPAPREGEALSSWLNRVALCYHIEVSELLEHDLGHGQVDDLDTAPPLALLAMLSQRSGIELNRLRCMSFAGWVPWLLDSLDDQIPDALETYAFQLSVLLPTHRRKTRSITSWRAWLPSQPIHRACPLCLNDPENQAVLLAWKLPLMLSCPLHGCRLESYWGVPGRFLGWENADAEPRTASDAIAAMDQRTWQALTTGHLELPRRRIHAGLWFRLLRTLLDELNTPLSACGTYAGYLRQVWEGCGHPLRAGQSLWRPYETLNPAVRLQMLEAAATAISLIEVRYISPPGEQAKLFWSEPQTGFTSGLPTKAPKPEPINHWQRAVQAIDEAIIEARHNPETARSLFALASYGRRDPASLEQLRATFAKEGIATEFLSHYEPDGSFACLRQNDGLSDKF
SIO_010081: ALIDE_RS22880
subclass of: SO_0000673
so part of: ALIDE_RS22880
location: 67743..68960
location: region:67743-68960:1
so has part: feature:67743-68960:1:exon

WP_011137967.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:67743-68960:1:exon

ALIDE_RS22885
type: Gene
subclass of: SO_0000704
RO_0002162: 596153
locus tag: ALIDE_RS22885
old locus tag: Alide_4496
so part of: sequence
location: 69021..69635
location: region:69021-69635:1
so has part: feature:69021-69635:1:exon
subclass of: SO_0000010

position:69021:1
position: 69021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:69635:1
position: 69635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69021-69635:1:exon

ALIDE_RS22885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 596153
locus tag: ALIDE_RS22885
old locus tag: Alide_4496
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000904941.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MLIGYMRVSKADGSQATDLQRDALIAAGVDPVHLYEDQASGMREDRPGLTSCLKALRTGDTLVVWKLDRLGRDLRHLINTVHDLTGRGIGLKVLTGHGAAIDTTTAAGKLVFGIFAALAEFERELIAERTIAGLASARARGRKGGRPFKMTAAKLRLAMAAMGQPETKVGDLCQELGVTRQTLYRHVSPKGELRPDGEKLLSRI
SIO_010081: ALIDE_RS22885
subclass of: SO_0000673
so part of: ALIDE_RS22885
location: 69021..69635
location: region:69021-69635:1
so has part: feature:69021-69635:1:exon

WP_000904941.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:69021-69635:1:exon

ALIDE_RS22890
type: Gene
subclass of: SO_0000704
RO_0002162: 596153
gene: merE
locus tag: ALIDE_RS22890
old locus tag: Alide_4497
so part of: sequence
location: complement(69688..69924)
location: region:69688-69924:-1
so has part: feature:69688-69924:-1:exon
subclass of: SO_0000010

position:69688:-1
position: 69688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:69924:-1
position: 69924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69688-69924:-1:exon

ALIDE_RS22890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 596153
gene: merE
locus tag: ALIDE_RS22890
old locus tag: Alide_4497
inference: COORDINATES: similar to AA sequence:RefSeq:YP_005229645.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: broad-spectrum mercury transporter MerE
translation: MNSPERLPSETHKPITGYLWGALAVLTCPCHLPILAIVLAGTTAGAFIGEYWGIAALTLTGLFVLSVTRLLRAFKDRS
SIO_010081: ALIDE_RS22890
subclass of: SO_0000673
so part of: ALIDE_RS22890
location: complement(69688..69924)
location: region:69688-69924:-1
so has part: feature:69688-69924:-1:exon

WP_001087809.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:69688-69924:-1:exon

ALIDE_RS22895
type: Gene
subclass of: SO_0000704
RO_0002162: 596153
gene: merD
locus tag: ALIDE_RS22895
old locus tag: Alide_4498
so part of: sequence
location: complement(69921..70286)
location: region:69921-70286:-1
so has part: feature:69921-70286:-1:exon
subclass of: SO_0000010

position:69921:-1
position: 69921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:70286:-1
position: 70286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69921-70286:-1:exon

ALIDE_RS22895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 596153
gene: merD
locus tag: ALIDE_RS22895
old locus tag: Alide_4498
function: Predicted transcriptional regulators
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001277466.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0045892 - negative regulation of DNA-templated transcription [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: mercury resistance co-regulator MerD
translation: MSAYTVSRLALDAGVSVHIVRDYLLRGLLRPVACTPGGYGLFDDAALQRLCFVRAAFEAGIGLDALARLCRALDAADGDEAAAQLAVLRQFVERRREALADLEVQLATMPTEPAQHAESLP
SIO_010081: ALIDE_RS22895
subclass of: SO_0000673
so part of: ALIDE_RS22895
location: complement(69921..70286)
location: region:69921-70286:-1
so has part: feature:69921-70286:-1:exon

WP_003465059.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:69921-70286:-1:exon

ALIDE_RS22900
type: Gene
subclass of: SO_0000704
RO_0002162: 596153
gene: merA
locus tag: ALIDE_RS22900
old locus tag: Alide_4499
so part of: sequence
location: complement(70303..71949)
location: region:70303-71949:-1
so has part: feature:70303-71949:-1:exon
subclass of: SO_0000010

position:70303:-1
position: 70303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:71949:-1
position: 71949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70303-71949:-1:exon

ALIDE_RS22900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 596153
gene: merA
locus tag: ALIDE_RS22900
old locus tag: Alide_4499
EC number: 1.16.1.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016240396.1
GO function: GO:0016152 - mercury (II) reductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: mercury(II) reductase
translation: MTEITVNGMTCTSCATHVKDALEKIPGVNAAVVSYPESRAQVMADTAVSHNQLLAAIAALGYQGSIRVGDFKDEPKIRDALEGAGLHIAIIGSGGAAMAAALKAVEQGATVTLIERGTIGGTCVNIGCVPSKIMIRAAHIAHLRRESPFDGGIAATVPAIDRSKLLAQQQARVDELRHAKYEGILDGNPAITVLHGEARFKDDQSLVVRLNEGGEREVTFDRCLVATGASPAVPPIPGLKESPYWTSTEALVSDTIPARLAVIGSSVVALELAQAFARLGSQVTILARSTLFFREDPAIGEAVTAAFRAEGIEVLEHTQASQVAHVNGEFVLTTGHGELRADKLLVATGRAPNTRSLALDAAGVTVNAQGAIVIDQGMRTSNPNIYAAGDCTDQPQFVYVAAAAGTRAAINMTGGDAALNLTAMPAVVFTDPQVATVGYSEAEAHHDGIETDSRTLTLDNVPRALANFDTRGFIKLVIEEGSGRLIGVQAVAPEAGELIQTAVLAIRNRMTVQELADQLFPYLTMVEGLKLAAQTFNKDVKQLSCCAG
SIO_010081: ALIDE_RS22900
subclass of: SO_0000673
so part of: ALIDE_RS22900
location: complement(70303..71949)
location: region:70303-71949:-1
so has part: feature:70303-71949:-1:exon

WP_000136268.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:70303-71949:-1:exon

ALIDE_RS22905
type: Gene
subclass of: SO_0000704
RO_0002162: 596153
gene: merF
locus tag: ALIDE_RS22905
old locus tag: Alide_4500
so part of: sequence
location: complement(71946..72191)
location: region:71946-72191:-1
so has part: feature:71946-72191:-1:exon
subclass of: SO_0000010

position:71946:-1
position: 71946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:72191:-1
position: 72191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:71946-72191:-1:exon

ALIDE_RS22905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 596153
gene: merF
locus tag: ALIDE_RS22905
old locus tag: Alide_4500
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000654684.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: mercury resistance system transport protein MerF
translation: MKDPKTLLRVSIIGTTLVALCCFTPVLVILLGVVGLSALTGYLDYVLLPALAIFIGLTIYAIQRKRQADACCTPKFNGVKK
SIO_010081: ALIDE_RS22905
subclass of: SO_0000673
so part of: ALIDE_RS22905
location: complement(71946..72191)
location: region:71946-72191:-1
so has part: feature:71946-72191:-1:exon

WP_000654684.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:71946-72191:-1:exon

ALIDE_RS22910
type: Gene
subclass of: SO_0000704
RO_0002162: 596153
gene: merP
locus tag: ALIDE_RS22910
old locus tag: Alide_4501
so part of: sequence
location: complement(72194..72469)
location: region:72194-72469:-1
so has part: feature:72194-72469:-1:exon
subclass of: SO_0000010

position:72194:-1
position: 72194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:72469:-1
position: 72469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72194-72469:-1:exon

ALIDE_RS22910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 596153
gene: merP
locus tag: ALIDE_RS22910
old locus tag: Alide_4501
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011633167.1
GO function: GO:0045340 - mercury ion binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: mercury resistance system periplasmic binding protein MerP
translation: MKKLLSALALAAVVAPVWAATQTVTLSVPGMTCSACPITVKKAISKVDGVSKVDVTFETREAVVTFDDAKTSVQKLTKATEDAGYPSSVKN
SIO_010081: ALIDE_RS22910
subclass of: SO_0000673
so part of: ALIDE_RS22910
location: complement(72194..72469)
location: region:72194-72469:-1
so has part: feature:72194-72469:-1:exon

WP_000735441.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:72194-72469:-1:exon

ALIDE_RS22915
type: Gene
subclass of: SO_0000704
RO_0002162: 596153
gene: merT
locus tag: ALIDE_RS22915
old locus tag: Alide_4502
so part of: sequence
location: complement(72485..72835)
location: region:72485-72835:-1
so has part: feature:72485-72835:-1:exon
subclass of: SO_0000010

position:72485:-1
position: 72485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:72835:-1
position: 72835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72485-72835:-1:exon

ALIDE_RS22915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 596153
gene: merT
locus tag: ALIDE_RS22915
old locus tag: Alide_4502
inference: COORDINATES: similar to AA sequence:RefSeq:YP_005229639.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: mercuric ion transporter MerT
translation: MSEPQNGRGALFTGGLAAILASACCLGPLVLIALGFSGAWIGNLTVLEPYRPIFIGVALVALFFAWRRIYRPSAACKPGEVCAIPQVRATYKLIFWGVAVLVLVALGFPYVVPFFY
SIO_010081: ALIDE_RS22915
subclass of: SO_0000673
so part of: ALIDE_RS22915
location: complement(72485..72835)
location: region:72485-72835:-1
so has part: feature:72485-72835:-1:exon

WP_001294667.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:72485-72835:-1:exon

ALIDE_RS22920
type: Gene
subclass of: SO_0000704
RO_0002162: 596153
gene: merR
locus tag: ALIDE_RS22920
old locus tag: Alide_4503
so part of: sequence
location: 72907..73341
location: region:72907-73341:1
so has part: feature:72907-73341:1:exon
subclass of: SO_0000010

position:72907:1
position: 72907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:73341:1
position: 73341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72907-73341:1:exon

ALIDE_RS22920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 596153
gene: merR
locus tag: ALIDE_RS22920
old locus tag: Alide_4503
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000414383.1
GO function: GO:0001228 - DNA-binding transcription activator activity, RNA polymerase II-specific [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Hg(II)-responsive transcriptional regulator
translation: MENNLENLTIGVFARTAGVNVETIRFYQRKGLLPEPDKPYGSIRRYGETDVTRVRFVKSAQRLGFSLDEIAELLRLEDGTHCEEASSLAEHKLKDVRERMADLARMEAVLSDLVCACHARKGNVSCPLIASLQGKKEPRSADAV
SIO_010081: ALIDE_RS22920
subclass of: SO_0000673
so part of: ALIDE_RS22920
location: 72907..73341
location: region:72907-73341:1
so has part: feature:72907-73341:1:exon

WP_000429838.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:72907-73341:1:exon

ALIDE_RS22925
type: Gene
subclass of: SO_0000704
RO_0002162: 596153
locus tag: ALIDE_RS22925
old locus tag: Alide_4504
so part of: sequence
location: complement(73466..73855)
location: region:73466-73855:-1
so has part: feature:73466-73855:-1:exon
subclass of: SO_0000010

position:73466:-1
position: 73466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:73855:-1
position: 73855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:73466-73855:-1:exon

ALIDE_RS22925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 596153
locus tag: ALIDE_RS22925
old locus tag: Alide_4504
inference: COORDINATES: protein motif:HMM:NF028004.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome P460 family protein
translation: MDEKSASRGLHDVYTEKASAEHYRKTGKFPDGATLVKEIRKLETSAMTTGDPVVWGSDAAVWFVMVKDAKGRFASNPLWGDGWGWALFKADAPAKNVAVSYAADCMGCHVPAAKTDRVFIQGYPTLTQH
SIO_010081: ALIDE_RS22925
subclass of: SO_0000673
so part of: ALIDE_RS22925
location: complement(73466..73855)
location: region:73466-73855:-1
so has part: feature:73466-73855:-1:exon

WP_197506363.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:73466-73855:-1:exon

ALIDE_RS22930
type: Gene
subclass of: SO_0000704
RO_0002162: 596153
locus tag: ALIDE_RS22930
old locus tag: Alide_4505
so part of: sequence
location: complement(74042..74575)
location: region:74042-74575:-1
so has part: feature:74042-74575:-1:exon
subclass of: SO_0000010

position:74042:-1
position: 74042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:74575:-1
position: 74575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74042-74575:-1:exon

ALIDE_RS22930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 596153
locus tag: ALIDE_RS22930
old locus tag: Alide_4505
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013521184.1
GO function: GO:0051920 - peroxiredoxin activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: carboxymuconolactone decarboxylase family protein
translation: MTQIAPLTIDTADAATAATLKAVKAKLGVVPNLLATLAHAPAALNGYLGLSETLGTGRLSATQREIVALAAGQANRCQYCLSAHTLIGKGAGLSAEAIAAARTGQAANALDDAIAGFARALVEQRGVVSADAMANYRRAGLDDGLILEVIANIALNTLTNYTNHIADTTVDFPVVAV
SIO_010081: ALIDE_RS22930
subclass of: SO_0000673
so part of: ALIDE_RS22930
location: complement(74042..74575)
location: region:74042-74575:-1
so has part: feature:74042-74575:-1:exon

WP_013521184.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:74042-74575:-1:exon

ALIDE_RS22935
type: Gene
subclass of: SO_0000704
RO_0002162: 596153
locus tag: ALIDE_RS22935
old locus tag: Alide_4506
so part of: sequence
location: 74693..75535
location: region:74693-75535:1
so has part: feature:74693-75535:1:exon
subclass of: SO_0000010

position:74693:1
position: 74693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:75535:1
position: 75535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74693-75535:1:exon

ALIDE_RS22935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 596153
locus tag: ALIDE_RS22935
old locus tag: Alide_4506
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003830784.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AraC family transcriptional regulator
translation: MADRLAGLLRHYSLSARVFHSGAFCGQHHYAAPHGYIHLVRRGPITARSPVHEDLLVTEPSLLFYPRVASHRFVAAPGDTAELLCAEVDLGASTGNPLAMALPSMLLIPLADLPGLGPTLELLSAEAERDQCGRQAAIDRLCELLLIQLLRYLMDGRLGATGLLAGLADPKLARAITAMHDAPQTAWSLEALAAQAGMSRARFAAAFKDAVGVTPGDYLADWRMNVSCTLLKQGRPVAVVADRVGYGSPNALARAFRVRMGCAPRDWLAQQRGDASLSGS
SIO_010081: ALIDE_RS22935
subclass of: SO_0000673
so part of: ALIDE_RS22935
location: 74693..75535
location: region:74693-75535:1
so has part: feature:74693-75535:1:exon

WP_013521185.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:74693-75535:1:exon

ALIDE_RS22940
type: Gene
subclass of: SO_0000704
RO_0002162: 596153
locus tag: ALIDE_RS22940
old locus tag: Alide_4507
so part of: sequence
location: 75713..76003
location: region:75713-76003:1
so has part: feature:75713-76003:1:exon
subclass of: SO_0000010

position:75713:1
position: 75713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:76003:1
position: 76003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:75713-76003:1:exon

ALIDE_RS22940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 596153
locus tag: ALIDE_RS22940
old locus tag: Alide_4507
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001247892.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nucleotidyltransferase
translation: MRPSVVLDMKRSAVREAVGRFRAANPRVFGSVLHGTDRDGSDLDLLVDALPGATLLDLGDLEEELKSLLGVDVDLLTPGDLPPKFRAKVLAEAQPI
SIO_010081: ALIDE_RS22940
subclass of: SO_0000673
so part of: ALIDE_RS22940
location: 75713..76003
location: region:75713-76003:1
so has part: feature:75713-76003:1:exon

WP_001247892.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:75713-76003:1:exon

ALIDE_RS22945
type: Gene
subclass of: SO_0000704
RO_0002162: 596153
locus tag: ALIDE_RS22945
old locus tag: Alide_4508
so part of: sequence
location: 76000..76386
location: region:76000-76386:1
so has part: feature:76000-76386:1:exon
subclass of: SO_0000010

position:76000:1
position: 76000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:76386:1
position: 76386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:76000-76386:1:exon

ALIDE_RS22945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 596153
locus tag: ALIDE_RS22945
old locus tag: Alide_4508
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008932165.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF86 domain-containing protein
translation: MSENRLPDYLDHIQQAATDARSFVEGMAKDDFLADKRTQQAVIMSLIVIGEAATKVMDGYVEFTQAHADVPWRSMRNMRNRMAHGYFDINLDVVWETVQEWLPALLQQLPAVRQDADDEDRNDKGMEP
SIO_010081: ALIDE_RS22945
subclass of: SO_0000673
so part of: ALIDE_RS22945
location: 76000..76386
location: region:76000-76386:1
so has part: feature:76000-76386:1:exon

WP_003100872.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:76000-76386:1:exon

ALIDE_RS23875
type: Gene
subclass of: SO_0000704
RO_0002162: 596153
locus tag: ALIDE_RS23875
old locus tag: Alide_4510
so part of: sequence
location: 76623..76979
location: region:76623-76979:1
so has part: feature:76623-76979:1:exon
subclass of: SO_0000010

position:76623:1
position: 76623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:76979:1
position: 76979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:76623-76979:1:exon

ALIDE_RS23875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 596153
locus tag: ALIDE_RS23875
old locus tag: Alide_4510
function: Uncharacterized conserved protein, contains double-stranded beta-helix domain
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003465043.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cupin domain-containing protein
translation: MTVESRIFSVAEYVQPSEGEPIRSVVLETRDSIIVVWHVHPGQEIAAHIHPHGQDTWTVLSGMADYFQGNGIVRALREGEIAVARPGQVHGARNTGTEPFVFVSVVASANAGFVLAER
SIO_010081: ALIDE_RS23875
subclass of: SO_0000673
so part of: ALIDE_RS23875
location: 76623..76979
location: region:76623-76979:1
so has part: feature:76623-76979:1:exon

WP_003465043.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:76623-76979:1:exon

ALIDE_RS22950
type: Gene
subclass of: SO_0000704
RO_0002162: 596153
locus tag: ALIDE_RS22950
old locus tag: Alide_4511
so part of: sequence
location: 77234..77560
location: region:77234-77560:1
so has part: feature:77234-77560:1:exon
subclass of: SO_0000010

position:77234:1
position: 77234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:77560:1
position: 77560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:77234-77560:1:exon

ALIDE_RS22950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 596153
locus tag: ALIDE_RS22950
old locus tag: Alide_4511
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011809177.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSRSRRKTPIVGHTTCGSEREDKKLWHQRWRTRERTALTSASPEALSAHLPLLENQASSVWSMGKDGRSYWPVKRQAATADRIANHKGRNPQERASLKKRLLRKWMSK
SIO_010081: ALIDE_RS22950
subclass of: SO_0000673
so part of: ALIDE_RS22950
location: 77234..77560
location: region:77234-77560:1
so has part: feature:77234-77560:1:exon

WP_003100858.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:77234-77560:1:exon

ALIDE_RS22955
type: Gene
subclass of: SO_0000704
RO_0002162: 596153
locus tag: ALIDE_RS22955
old locus tag: Alide_4512
so part of: sequence
location: 77557..78057
location: region:77557-78057:1
so has part: feature:77557-78057:1:exon
subclass of: SO_0000010

position:77557:1
position: 77557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:78057:1
position: 78057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:77557-78057:1:exon

ALIDE_RS22955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 596153
locus tag: ALIDE_RS22955
old locus tag: Alide_4512
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003100856.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKLSFHQHIALFWMIGAPGVFAPVIENAKRPDAGAVMAWGVAIVAVMILFTPLLLRCPPFRRWYGRTDALSERQRQALAERGLRRYYQTAFDDGYVPRVMPYVWRIIWTVGGLMAVTAVLPTNTGRPAFDALVVFSTWYPIGVMLLVFASRPLGRLIRQRAQERRK
SIO_010081: ALIDE_RS22955
subclass of: SO_0000673
so part of: ALIDE_RS22955
location: 77557..78057
location: region:77557-78057:1
so has part: feature:77557-78057:1:exon

WP_003100856.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:77557-78057:1:exon

ALIDE_RS22960
type: Gene
subclass of: SO_0000704
RO_0002162: 596153
locus tag: ALIDE_RS22960
old locus tag: Alide_4513
so part of: sequence
location: 78054..78425
location: region:78054-78425:1
so has part: feature:78054-78425:1:exon
subclass of: SO_0000010

position:78054:1
position: 78054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:78425:1
position: 78425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78054-78425:1:exon

ALIDE_RS22960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 596153
locus tag: ALIDE_RS22960
old locus tag: Alide_4513
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003100853.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSTSTIEALASAWARIAEEAEFPADYEGTATPQAHRASEAIQEQIRERIVATNDMRLFSLLHLLGQASLRMEQALWPEDYERMTREVEEALRQATDANARSYTHEEVMQAMQERIDRARDKPC
SIO_010081: ALIDE_RS22960
subclass of: SO_0000673
so part of: ALIDE_RS22960
location: 78054..78425
location: region:78054-78425:1
so has part: feature:78054-78425:1:exon

WP_003100853.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:78054-78425:1:exon

ALIDE_RS22965
type: Gene
subclass of: SO_0000704
RO_0002162: 596153
locus tag: ALIDE_RS22965
old locus tag: Alide_4514
so part of: sequence
location: 78419..78976
location: region:78419-78976:1
so has part: feature:78419-78976:1:exon
subclass of: SO_0000010

position:78419:1
position: 78419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:78976:1
position: 78976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78419-78976:1:exon

ALIDE_RS22965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 596153
locus tag: ALIDE_RS22965
old locus tag: Alide_4514
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019897068.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MLIGYARVSTQDQNLELQREALSKAGCKKVFEDKVSGTRADRPGLAKTLEMLREGDTLVVWKLDRLGRSVKQLVDLVGDLHKHGVQFRSLTDSIDTGTPSGRFFFHVMASLAEMERELTVERTRAGLEVAKQLGRKGGRKPKMTDSKIESAKKLLASGVPPKDVAKNLGVSIPTLYRWVPASTHA
SIO_010081: ALIDE_RS22965
subclass of: SO_0000673
so part of: ALIDE_RS22965
location: 78419..78976
location: region:78419-78976:1
so has part: feature:78419-78976:1:exon

WP_003100847.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:78419-78976:1:exon