Rhinolophus ferrumequinum isolate MPI-CBG mRhiFer1 chromosome 19, mRhiFer1_v1.p, whole genome shotgun sequence.
type: Entry
definition: Rhinolophus ferrumequinum isolate MPI-CBG mRhiFer1 chromosome 19, mRhiFer1_v1.p, whole genome shotgun sequence.
sequence version: NC_046302.1
sequence date: 2023-02-28
sequence: sequence
division: CON
label: NC_046302.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA613604
dblink: SAMN09948510
keyword: WGS
keyword: RefSeq
source: Rhinolophus ferrumequinum (greater horseshoe bat)
organism: Rhinolophus ferrumequinum
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Microchiroptera; Rhinolophidae; Rhinolophinae; Rhinolophus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM014244.1.\nAssembly name: mRhiFer1_v1.p\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2019/05/16. The original whole-genome shotgun project has the\naccession RXPC00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 07-SEP-2018\nAssembly Method :: FALCON-Unzip v. 1.0.2; scaff10X v. git\n 4.28.2018; Bionano Solve BspQI/BssSI v.\n 3.2.1; Salsa2 HiC v. 2.0; purge_haplotigs\n v. bit 7.10.2018; smrtanalysis Arrow\n polishing & gap filling v. 5.1.0.26412;\n longranger align v. 2.2.2; FALCON v.\n 5.1.1; freebayes v. 1.2.0; gEVAL manual\n curation v. 2018-09-07\nAssembly Name :: mRhiFer1_v1.p\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 52.8x\nSequencing Technology :: PacBio Sequel; 10X Genomics linked reads;\n Bionano Genomics 2 enzyme; Phase Genomics\n HiC\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Status :: Updated annotation\nAnnotation Name :: GCF_004115265.2-RS_2023_02\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 10.1\nAnnotation Method :: Gnomon; cmsearch; tRNAscan-SE\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\nAnnotation Date :: 02/27/2023\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 60482744
topology: linear
so has quality: SO_0000987
location: 1..60482744
location: region:1-60482744:1
RO_0002162: 59479

NC_046302
type: RefSeq
SIO_000068: refseq

PRJNA613604
type: BioProject
SIO_000068: bioproject

SAMN09948510
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:60482744:1
position: 60482744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-60482744:1:source
so part of: sequence
organism: Rhinolophus ferrumequinum
mol type: genomic DNA
isolate: MPI-CBG mRhiFer1
chromosome: 19
sex: male
tissue type: liver
country: United Kingdom: Woodchester Mansion, Gloucestershire
lat lon: 51.7108 N 2.2776 W
collection date: 2016-05-31
collected by: Gareth Jones

59479
type: Taxonomy
SIO_000068: taxonomy

NPHP1
type: Gene
subclass of: SO_0000704
RO_0002162: 59479
gene: NPHP1
note: nephrocystin 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 38621..103587
location: region:38621-103587:1
so has part: feature:38621-103587:1:exon
subclass of: SO_0000010

117011965
type: Gene
SIO_000068: ncbigene

position:38621:1
position: 38621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:103587:1
position: 103587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38621-103587:1:exon

NPHP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: NPHP1
product: nephrocystin 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_033087815.1
SIO_010081: NPHP1
subclass of: SO_0000673
so part of: NPHP1
location: join(38621..38757,41745..41818,43113..43173,44206..44330,46958..47195,47499..47600,57893..57993,58329..58371,59493..59580,60912..61006,62651..62779,69522..69596,71322..71432,74132..74214,76326..76402,77192..77291,94318..94430,97436..97509,100830..100874,102446..103587)
location: region:38621-103587:1
so has part: feature:38621-38757:1:exon
so has part: feature:41745-41818:1:exon
so has part: feature:43113-43173:1:exon
so has part: feature:44206-44330:1:exon
so has part: feature:46958-47195:1:exon
so has part: feature:47499-47600:1:exon
so has part: feature:57893-57993:1:exon
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SIO_000300: 2
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position: 41745
reference: sequence
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reference: sequence
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urn:…
SIO_000300: 3
SIO_000628: feature:43113-43173:1:exon

position:43113:1
position: 43113
reference: sequence
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reference: sequence
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SIO_000628: feature:44206-44330:1:exon

position:44206:1
position: 44206
reference: sequence
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reference: sequence
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urn:…
SIO_000300: 5
SIO_000628: feature:46958-47195:1:exon

position:46958:1
position: 46958
reference: sequence
type: ForwardStrandPosition
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position:47195:1
position: 47195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:47499-47600:1:exon

position:47499:1
position: 47499
reference: sequence
type: ForwardStrandPosition
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position:47600:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 7
SIO_000628: feature:57893-57993:1:exon

position:57893:1
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reference: sequence
type: ForwardStrandPosition
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position: 57993
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 8
SIO_000628: feature:58329-58371:1:exon

position:58329:1
position: 58329
reference: sequence
type: ForwardStrandPosition
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position:58371:1
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reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:59493-59580:1:exon

position:59493:1
position: 59493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:59580:1
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reference: sequence
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urn:…
SIO_000300: 10
SIO_000628: feature:60912-61006:1:exon

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reference: sequence
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reference: sequence
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SIO_000628: feature:62651-62779:1:exon

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reference: sequence
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urn:…
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SIO_000628: feature:69522-69596:1:exon

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reference: sequence
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position:69596:1
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reference: sequence
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urn:…
SIO_000300: 13
SIO_000628: feature:71322-71432:1:exon

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reference: sequence
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reference: sequence
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urn:…
SIO_000300: 14
SIO_000628: feature:74132-74214:1:exon

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position:76326:1
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reference: sequence
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urn:…
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SIO_000628: feature:77192-77291:1:exon

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reference: sequence
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reference: sequence
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type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:94318-94430:1:exon

position:94318:1
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reference: sequence
type: ForwardStrandPosition
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position:94430:1
position: 94430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:97436-97509:1:exon

position:97436:1
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reference: sequence
type: ForwardStrandPosition
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position:97509:1
position: 97509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:100830-100874:1:exon

position:100830:1
position: 100830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:100874:1
position: 100874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:102446-103587:1:exon

position:102446:1
position: 102446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NPHP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: NPHP1
product: nephrocystin 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_033087816.1
SIO_010081: NPHP1
subclass of: SO_0000673
so part of: NPHP1
location: join(38621..38757,41745..41818,43113..43173,44206..44330,46973..47195,47499..47600,57893..57993,58329..58371,59493..59580,60912..61006,62651..62779,69522..69596,71322..71432,74132..74214,76326..76402,77192..77291,94318..94430,97436..97509,100830..100874,102446..103587)
location: region:38621-103587:1
so has part: feature:38621-38757:1:exon
so has part: feature:41745-41818:1:exon
so has part: feature:43113-43173:1:exon
so has part: feature:44206-44330:1:exon
so has part: feature:46973-47195:1:exon
so has part: feature:47499-47600:1:exon
so has part: feature:57893-57993:1:exon
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so has part: feature:59493-59580:1:exon
so has part: feature:60912-61006:1:exon
so has part: feature:62651-62779:1:exon
so has part: feature:69522-69596:1:exon
so has part: feature:71322-71432:1:exon
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so has part: feature:76326-76402:1:exon
so has part: feature:77192-77291:1:exon
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SIO_000628: feature:43113-43173:1:exon

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SIO_000300: 4
SIO_000628: feature:44206-44330:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:46973-47195:1:exon

position:46973:1
position: 46973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:47499-47600:1:exon

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SIO_000300: 7
SIO_000628: feature:57893-57993:1:exon

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SIO_000300: 8
SIO_000628: feature:58329-58371:1:exon

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SIO_000300: 9
SIO_000628: feature:59493-59580:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:60912-61006:1:exon

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SIO_000300: 11
SIO_000628: feature:62651-62779:1:exon

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SIO_000300: 12
SIO_000628: feature:69522-69596:1:exon

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SIO_000300: 13
SIO_000628: feature:71322-71432:1:exon

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SIO_000300: 14
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SIO_000300: 15
SIO_000628: feature:76326-76402:1:exon

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SIO_000628: feature:77192-77291:1:exon

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SIO_000300: 17
SIO_000628: feature:94318-94430:1:exon

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SIO_000628: feature:97436-97509:1:exon

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SIO_000300: 19
SIO_000628: feature:100830-100874:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:102446-103587:1:exon

NPHP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: NPHP1
product: nephrocystin 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033087819.1
SIO_010081: NPHP1
subclass of: SO_0000673
so part of: NPHP1
location: join(38621..38757,41745..41818,43113..43173,44206..44330,46958..47195,47499..47600,57893..57993,58329..58371,59493..59580,60912..61006,62651..62779,69522..69596,71322..71432,74132..74214,76326..76402,77192..77291,94318..94430,100830..100874,102446..102582)
location: region:38621-102582:1
so has part: feature:38621-38757:1:exon
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so has part: feature:43113-43173:1:exon
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so has part: feature:100830-100874:1:exon
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position:102582:1
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reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
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SIO_000628: feature:94318-94430:1:exon

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SIO_000300: 19
SIO_000628: feature:102446-102582:1:exon

NPHP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: NPHP1
product: nephrocystin 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033087817.1
SIO_010081: NPHP1
subclass of: SO_0000673
so part of: NPHP1
location: join(38648..38757,44206..44330,46958..47195,47499..47600,57893..57993,58329..58371,59493..59580,60912..61006,62651..62779,69522..69596,71322..71432,74132..74214,76326..76402,77192..77291,94318..94430,97436..97509,100830..100874,102446..103587)
location: region:38648-103587:1
so has part: feature:38648-38757:1:exon
so has part: feature:44206-44330:1:exon
so has part: feature:46958-47195:1:exon
so has part: feature:47499-47600:1:exon
so has part: feature:57893-57993:1:exon
so has part: feature:58329-58371:1:exon
so has part: feature:59493-59580:1:exon
so has part: feature:60912-61006:1:exon
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so has part: feature:69522-69596:1:exon
so has part: feature:71322-71432:1:exon
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so has part: feature:76326-76402:1:exon
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so has part: feature:94318-94430:1:exon
so has part: feature:97436-97509:1:exon
so has part: feature:100830-100874:1:exon
so has part: feature:102446-103587:1:exon

position:38648:1
position: 38648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38648-38757:1:exon

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SIO_000628: feature:44206-44330:1:exon

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SIO_000628: feature:60912-61006:1:exon

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SIO_000628: feature:62651-62779:1:exon

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SIO_000628: feature:69522-69596:1:exon

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SIO_000628: feature:74132-74214:1:exon

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SIO_000628: feature:76326-76402:1:exon

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SIO_000300: 14
SIO_000628: feature:77192-77291:1:exon

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SIO_000628: feature:94318-94430:1:exon

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SIO_000628: feature:97436-97509:1:exon

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SIO_000300: 17
SIO_000628: feature:100830-100874:1:exon

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SIO_000300: 18
SIO_000628: feature:102446-103587:1:exon

NPHP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: NPHP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nephrocystin-1 isoform X1
translation: MLPRWPRGPLRCLQHRGQELKQQVDSLLSESRLKGALEASKKRDIYQRCIQLKQAIDENKNTLQKLKKADEPTPVGNYHQQKEEEHSLLDKLTHQLQELAMSISRENITEITLCRIGALTERKEDDDSAEGDEEEDDDDEEESKESGGEEEETQEEEKQENESHQQATSKEYTAVGNFTAQQAGDLTFKKGEILLIIEKKPDGWWMAKNAKGNKGLVPKTYLEPYHKEEGQESSEEGSEEDVEVGGELAEEPEVKQRTGSHWSAVRKALSEQINTVDVLTTMGAIPTGFRPSTLVQLLEEGNQFRASYFLQPELAPSQLAFRDLMWDAKTGTIRSRPSHVSLILTLWSCKMIPLPGMSIQVLSRHVRLCLFDGNKVLSNIHTVRATWQPKKPRTWTFSPQVTGILPCLLDGDCFLRSNSLSPDLGILFELGISYIRNSTGERGELSCGWVFLKLFDASGIPIPAKTYELFLNGGTPYEKGVEVDRSVSRRAHGSVFHQMMMMRRQPQLLVKLRSLNRRSRNILSLLPEILIGSMCCIQLLIFYRQILGDVLLKGRMSMQSADFISNPVLATFPKLLEQPDVMDALRSSWAEKESTLKRSEKRDGEFLKAVFLLVYHDCVVPLLHSTLLPPFRWAEEETEAARWKVIADFLKQNQENKGALQALLSPDGVHEPFDISEQTYDFLGEIRKKAA
SIO_010081: NPHP1
subclass of: SO_0000673
so part of: NPHP1
location: join(38689..38757,41745..41818,43113..43173,44206..44330,46958..47195,47499..47600,57893..57993,58329..58371,59493..59580,60912..61006,62651..62779,69522..69596,71322..71432,74132..74214,76326..76402,77192..77291,94318..94430,97436..97509,100830..100874,102446..102718)
location: region:38689-102718:1
so has part: feature:38689-38757:1:exon
so has part: feature:41745-41818:1:exon
so has part: feature:43113-43173:1:exon
so has part: feature:44206-44330:1:exon
so has part: feature:46958-47195:1:exon
so has part: feature:47499-47600:1:exon
so has part: feature:57893-57993:1:exon
so has part: feature:58329-58371:1:exon
so has part: feature:59493-59580:1:exon
so has part: feature:60912-61006:1:exon
so has part: feature:62651-62779:1:exon
so has part: feature:69522-69596:1:exon
so has part: feature:71322-71432:1:exon
so has part: feature:74132-74214:1:exon
so has part: feature:76326-76402:1:exon
so has part: feature:77192-77291:1:exon
so has part: feature:94318-94430:1:exon
so has part: feature:97436-97509:1:exon
so has part: feature:100830-100874:1:exon
so has part: feature:102446-102718:1:exon

XP_032943706.1
type: Protein
SIO_000068: ncbiprotein

position:38689:1
position: 38689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:102718:1
position: 102718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38689-38757:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:41745-41818:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:43113-43173:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:44206-44330:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:46958-47195:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:47499-47600:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:57893-57993:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:58329-58371:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:59493-59580:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:60912-61006:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:62651-62779:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:69522-69596:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:71322-71432:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:74132-74214:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:76326-76402:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:77192-77291:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:94318-94430:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:97436-97509:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:100830-100874:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:102446-102718:1:exon

NPHP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: NPHP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nephrocystin-1 isoform X2
translation: MLPRWPRGPLRCLQHRGQELKQQVDSLLSESRLKGALEASKKRDIYQRCIQLKQAIDENKNTLQKLKKADEPTPVGNYHQQKEEEHSLLDKLTHQLQELAMSISRENITEIGALTERKEDDDSAEGDEEEDDDDEEESKESGGEEEETQEEEKQENESHQQATSKEYTAVGNFTAQQAGDLTFKKGEILLIIEKKPDGWWMAKNAKGNKGLVPKTYLEPYHKEEGQESSEEGSEEDVEVGGELAEEPEVKQRTGSHWSAVRKALSEQINTVDVLTTMGAIPTGFRPSTLVQLLEEGNQFRASYFLQPELAPSQLAFRDLMWDAKTGTIRSRPSHVSLILTLWSCKMIPLPGMSIQVLSRHVRLCLFDGNKVLSNIHTVRATWQPKKPRTWTFSPQVTGILPCLLDGDCFLRSNSLSPDLGILFELGISYIRNSTGERGELSCGWVFLKLFDASGIPIPAKTYELFLNGGTPYEKGVEVDRSVSRRAHGSVFHQMMMMRRQPQLLVKLRSLNRRSRNILSLLPEILIGSMCCIQLLIFYRQILGDVLLKGRMSMQSADFISNPVLATFPKLLEQPDVMDALRSSWAEKESTLKRSEKRDGEFLKAVFLLVYHDCVVPLLHSTLLPPFRWAEEETEAARWKVIADFLKQNQENKGALQALLSPDGVHEPFDISEQTYDFLGEIRKKAA
SIO_010081: NPHP1
subclass of: SO_0000673
so part of: NPHP1
location: join(38689..38757,41745..41818,43113..43173,44206..44330,46973..47195,47499..47600,57893..57993,58329..58371,59493..59580,60912..61006,62651..62779,69522..69596,71322..71432,74132..74214,76326..76402,77192..77291,94318..94430,97436..97509,100830..100874,102446..102718)
location: region:38689-102718:1
so has part: feature:38689-38757:1:exon
so has part: feature:41745-41818:1:exon
so has part: feature:43113-43173:1:exon
so has part: feature:44206-44330:1:exon
so has part: feature:46973-47195:1:exon
so has part: feature:47499-47600:1:exon
so has part: feature:57893-57993:1:exon
so has part: feature:58329-58371:1:exon
so has part: feature:59493-59580:1:exon
so has part: feature:60912-61006:1:exon
so has part: feature:62651-62779:1:exon
so has part: feature:69522-69596:1:exon
so has part: feature:71322-71432:1:exon
so has part: feature:74132-74214:1:exon
so has part: feature:76326-76402:1:exon
so has part: feature:77192-77291:1:exon
so has part: feature:94318-94430:1:exon
so has part: feature:97436-97509:1:exon
so has part: feature:100830-100874:1:exon
so has part: feature:102446-102718:1:exon

XP_032943707.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38689-38757:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:41745-41818:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:43113-43173:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:44206-44330:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:46973-47195:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:47499-47600:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:57893-57993:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:58329-58371:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:59493-59580:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:60912-61006:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:62651-62779:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:69522-69596:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:71322-71432:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:74132-74214:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:76326-76402:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:77192-77291:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:94318-94430:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:97436-97509:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:100830-100874:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:102446-102718:1:exon

NPHP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: NPHP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nephrocystin-1 isoform X3
translation: MLPRWPRGPLRCLQHRGQELKQQADEPTPVGNYHQQKEEEHSLLDKLTHQLQELAMSISRENITEITLCRIGALTERKEDDDSAEGDEEEDDDDEEESKESGGEEEETQEEEKQENESHQQATSKEYTAVGNFTAQQAGDLTFKKGEILLIIEKKPDGWWMAKNAKGNKGLVPKTYLEPYHKEEGQESSEEGSEEDVEVGGELAEEPEVKQRTGSHWSAVRKALSEQINTVDVLTTMGAIPTGFRPSTLVQLLEEGNQFRASYFLQPELAPSQLAFRDLMWDAKTGTIRSRPSHVSLILTLWSCKMIPLPGMSIQVLSRHVRLCLFDGNKVLSNIHTVRATWQPKKPRTWTFSPQVTGILPCLLDGDCFLRSNSLSPDLGILFELGISYIRNSTGERGELSCGWVFLKLFDASGIPIPAKTYELFLNGGTPYEKGVEVDRSVSRRAHGSVFHQMMMMRRQPQLLVKLRSLNRRSRNILSLLPEILIGSMCCIQLLIFYRQILGDVLLKGRMSMQSADFISNPVLATFPKLLEQPDVMDALRSSWAEKESTLKRSEKRDGEFLKAVFLLVYHDCVVPLLHSTLLPPFRWAEEETEAARWKVIADFLKQNQENKGALQALLSPDGVHEPFDISEQTYDFLGEIRKKAA
SIO_010081: NPHP1
subclass of: SO_0000673
so part of: NPHP1
location: join(38689..38757,44206..44330,46958..47195,47499..47600,57893..57993,58329..58371,59493..59580,60912..61006,62651..62779,69522..69596,71322..71432,74132..74214,76326..76402,77192..77291,94318..94430,97436..97509,100830..100874,102446..102718)
location: region:38689-102718:1
so has part: feature:38689-38757:1:exon
so has part: feature:44206-44330:1:exon
so has part: feature:46958-47195:1:exon
so has part: feature:47499-47600:1:exon
so has part: feature:57893-57993:1:exon
so has part: feature:58329-58371:1:exon
so has part: feature:59493-59580:1:exon
so has part: feature:60912-61006:1:exon
so has part: feature:62651-62779:1:exon
so has part: feature:69522-69596:1:exon
so has part: feature:71322-71432:1:exon
so has part: feature:74132-74214:1:exon
so has part: feature:76326-76402:1:exon
so has part: feature:77192-77291:1:exon
so has part: feature:94318-94430:1:exon
so has part: feature:97436-97509:1:exon
so has part: feature:100830-100874:1:exon
so has part: feature:102446-102718:1:exon

XP_032943708.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38689-38757:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:44206-44330:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:46958-47195:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:47499-47600:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:57893-57993:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:58329-58371:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:59493-59580:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:60912-61006:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:62651-62779:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:69522-69596:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:71322-71432:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:74132-74214:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:76326-76402:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:77192-77291:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:94318-94430:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:97436-97509:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:100830-100874:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:102446-102718:1:exon

NPHP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: NPHP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nephrocystin-1 isoform X5
translation: MLPRWPRGPLRCLQHRGQELKQQVDSLLSESRLKGALEASKKRDIYQRCIQLKQAIDENKNTLQKLKKADEPTPVGNYHQQKEEEHSLLDKLTHQLQELAMSISRENITEITLCRIGALTERKEDDDSAEGDEEEDDDDEEESKESGGEEEETQEEEKQENESHQQATSKEYTAVGNFTAQQAGDLTFKKGEILLIIEKKPDGWWMAKNAKGNKGLVPKTYLEPYHKEEGQESSEEGSEEDVEVGGELAEEPEVKQRTGSHWSAVRKALSEQINTVDVLTTMGAIPTGFRPSTLVQLLEEGNQFRASYFLQPELAPSQLAFRDLMWDAKTGTIRSRPSHVSLILTLWSCKMIPLPGMSIQVLSRHVRLCLFDGNKVLSNIHTVRATWQPKKPRTWTFSPQVTGILPCLLDGDCFLRSNSLSPDLGILFELGISYIRNSTGERGELSCGWVFLKLFDASGIPIPAKTYELFLNGGTPYEKGVEVDRSVSRRAHGSVFHQMMMMRRQPQLLVKLRSLNRRSRNILSLLPEILIGSMCCIQLLIFYRQILGDVLLKGRMSMQSAEFMG
SIO_010081: NPHP1
subclass of: SO_0000673
so part of: NPHP1
location: join(38689..38757,41745..41818,43113..43173,44206..44330,46958..47195,47499..47600,57893..57993,58329..58371,59493..59580,60912..61006,62651..62779,69522..69596,71322..71432,74132..74214,76326..76402,77192..77291,94318..94430,100830..100843)
location: region:38689-100843:1
so has part: feature:38689-38757:1:exon
so has part: feature:41745-41818:1:exon
so has part: feature:43113-43173:1:exon
so has part: feature:44206-44330:1:exon
so has part: feature:46958-47195:1:exon
so has part: feature:47499-47600:1:exon
so has part: feature:57893-57993:1:exon
so has part: feature:58329-58371:1:exon
so has part: feature:59493-59580:1:exon
so has part: feature:60912-61006:1:exon
so has part: feature:62651-62779:1:exon
so has part: feature:69522-69596:1:exon
so has part: feature:71322-71432:1:exon
so has part: feature:74132-74214:1:exon
so has part: feature:76326-76402:1:exon
so has part: feature:77192-77291:1:exon
so has part: feature:94318-94430:1:exon
so has part: feature:100830-100843:1:exon

XP_032943710.1
type: Protein
SIO_000068: ncbiprotein

position:100843:1
position: 100843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38689-38757:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:41745-41818:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:43113-43173:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:44206-44330:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:46958-47195:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:47499-47600:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:57893-57993:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:58329-58371:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:59493-59580:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:60912-61006:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:62651-62779:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:69522-69596:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:71322-71432:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:74132-74214:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:76326-76402:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:77192-77291:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:94318-94430:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:100830-100843:1:exon

NPHP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: NPHP1
product: nephrocystin 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033087818.1
SIO_010081: NPHP1
subclass of: SO_0000673
so part of: NPHP1
location: join(38720..38757,41745..41818,44206..44330,46958..47195,47499..47600,57893..57993,58329..58371,59493..59580,60912..61006,62651..62779,69522..69596,71322..71432,74132..74214,76326..76402,77192..77291,94318..94430,97436..97509,100830..100874,102446..103587)
location: region:38720-103587:1
so has part: feature:38720-38757:1:exon
so has part: feature:41745-41818:1:exon
so has part: feature:44206-44330:1:exon
so has part: feature:46958-47195:1:exon
so has part: feature:47499-47600:1:exon
so has part: feature:57893-57993:1:exon
so has part: feature:58329-58371:1:exon
so has part: feature:59493-59580:1:exon
so has part: feature:60912-61006:1:exon
so has part: feature:62651-62779:1:exon
so has part: feature:69522-69596:1:exon
so has part: feature:71322-71432:1:exon
so has part: feature:74132-74214:1:exon
so has part: feature:76326-76402:1:exon
so has part: feature:77192-77291:1:exon
so has part: feature:94318-94430:1:exon
so has part: feature:97436-97509:1:exon
so has part: feature:100830-100874:1:exon
so has part: feature:102446-103587:1:exon

position:38720:1
position: 38720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38720-38757:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:41745-41818:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:44206-44330:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:46958-47195:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:47499-47600:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:57893-57993:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:58329-58371:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:59493-59580:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:60912-61006:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:62651-62779:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:69522-69596:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:71322-71432:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:74132-74214:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:76326-76402:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:77192-77291:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:94318-94430:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:97436-97509:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:100830-100874:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:102446-103587:1:exon

NPHP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: NPHP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nephrocystin-1 isoform X4
translation: MSISRENITEITLCRIGALTERKEDDDSAEGDEEEDDDDEEESKESGGEEEETQEEEKQENESHQQATSKEYTAVGNFTAQQAGDLTFKKGEILLIIEKKPDGWWMAKNAKGNKGLVPKTYLEPYHKEEGQESSEEGSEEDVEVGGELAEEPEVKQRTGSHWSAVRKALSEQINTVDVLTTMGAIPTGFRPSTLVQLLEEGNQFRASYFLQPELAPSQLAFRDLMWDAKTGTIRSRPSHVSLILTLWSCKMIPLPGMSIQVLSRHVRLCLFDGNKVLSNIHTVRATWQPKKPRTWTFSPQVTGILPCLLDGDCFLRSNSLSPDLGILFELGISYIRNSTGERGELSCGWVFLKLFDASGIPIPAKTYELFLNGGTPYEKGVEVDRSVSRRAHGSVFHQMMMMRRQPQLLVKLRSLNRRSRNILSLLPEILIGSMCCIQLLIFYRQILGDVLLKGRMSMQSADFISNPVLATFPKLLEQPDVMDALRSSWAEKESTLKRSEKRDGEFLKAVFLLVYHDCVVPLLHSTLLPPFRWAEEETEAARWKVIADFLKQNQENKGALQALLSPDGVHEPFDISEQTYDFLGEIRKKAA
SIO_010081: NPHP1
subclass of: SO_0000673
so part of: NPHP1
location: join(44302..44330,46958..47195,47499..47600,57893..57993,58329..58371,59493..59580,60912..61006,62651..62779,69522..69596,71322..71432,74132..74214,76326..76402,77192..77291,94318..94430,97436..97509,100830..100874,102446..102718)
location: region:44302-102718:1
so has part: feature:44302-44330:1:exon
so has part: feature:46958-47195:1:exon
so has part: feature:47499-47600:1:exon
so has part: feature:57893-57993:1:exon
so has part: feature:58329-58371:1:exon
so has part: feature:59493-59580:1:exon
so has part: feature:60912-61006:1:exon
so has part: feature:62651-62779:1:exon
so has part: feature:69522-69596:1:exon
so has part: feature:71322-71432:1:exon
so has part: feature:74132-74214:1:exon
so has part: feature:76326-76402:1:exon
so has part: feature:77192-77291:1:exon
so has part: feature:94318-94430:1:exon
so has part: feature:97436-97509:1:exon
so has part: feature:100830-100874:1:exon
so has part: feature:102446-102718:1:exon

XP_032943709.1
type: Protein
SIO_000068: ncbiprotein

position:44302:1
position: 44302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44302-44330:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:46958-47195:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:47499-47600:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:57893-57993:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:58329-58371:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:59493-59580:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:60912-61006:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:62651-62779:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:69522-69596:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:71322-71432:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:74132-74214:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:76326-76402:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:77192-77291:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:94318-94430:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:97436-97509:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:100830-100874:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:102446-102718:1:exon

LOC117012026
type: Gene
subclass of: SO_0000704
RO_0002162: 59479
gene: LOC117012026
note: small nucleolar RNA SNORA22; Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 46443..46562
location: region:46443-46562:1
so has part: feature:46443-46562:1:exon
subclass of: SO_0000578

117012026
type: Gene
SIO_000068: ncbigene

position:46443:1
position: 46443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46562:1
position: 46562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46443-46562:1:exon

LOC117012026
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59479
nc RNA class: snoRNA
gene: LOC117012026
product: small nucleolar RNA SNORA22
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00414
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004421103.1
SIO_010081: LOC117012026
subclass of: SO_0000673
so part of: LOC117012026
location: 46443..46562
location: region:46443-46562:1
so has part: feature:46443-46562:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:46443-46562:1:exon

GP9
type: Gene
subclass of: SO_0000704
RO_0002162: 59479
gene: GP9
note: glycoprotein IX platelet; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 180307..182073
location: region:180307-182073:1
so has part: feature:180307-182073:1:exon
subclass of: SO_0000010

117011825
type: Gene
SIO_000068: ncbigene

position:180307:1
position: 180307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:182073:1
position: 182073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:180307-182073:1:exon

GP9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: GP9
product: glycoprotein IX platelet
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_033087534.1
SIO_010081: GP9
subclass of: SO_0000673
so part of: GP9
location: join(180307..180438,181403..182073)
location: region:180307-182073:1
so has part: feature:180307-180438:1:exon
so has part: feature:181403-182073:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:180307-180438:1:exon

position:180438:1
position: 180438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:181403-182073:1:exon

position:181403:1
position: 181403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GP9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: GP9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: platelet glycoprotein IX
translation: MPAWGALFLLWATAEATKDCPVPCTCQALETMGLWVDCRGQGLTSLPTLPAHTRHLLLANNSLRSLPPGAFDHLPQLQTLDVTQNPWYCDCSLTYLRLWLEDHTPEALLIVHCSSPDLITVHPLGQLTGYELGNCGWQLQTSWAYPAVWWDVSLVVVATIDLALLAGLLCTATGSLD
SIO_010081: GP9
subclass of: SO_0000673
so part of: GP9
location: 181415..181948
location: region:181415-181948:1
so has part: feature:181415-181948:1:exon

XP_032943425.1
type: Protein
SIO_000068: ncbiprotein

position:181415:1
position: 181415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:181948:1
position: 181948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:181415-181948:1:exon

RAB43
type: Gene
subclass of: SO_0000704
RO_0002162: 59479
gene: RAB43
note: RAB43, member RAS oncogene family; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(214510..257536)
location: region:214510-257536:-1
so has part: feature:214510-257536:-1:exon
subclass of: SO_0000010

117011773
type: Gene
SIO_000068: ncbigene

position:214510:-1
position: 214510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:257536:-1
position: 257536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:214510-257536:-1:exon

RAB43
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: RAB43
product: RAB43, member RAS oncogene family, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_033087458.1
SIO_010081: RAB43
subclass of: SO_0000673
so part of: RAB43
location: complement(join(214510..217877,220069..220246,257170..257536))
location: region:214510-257536:-1
so has part: feature:257170-257536:-1:exon
so has part: feature:220069-220246:-1:exon
so has part: feature:214510-217877:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:257170-257536:-1:exon

position:257170:-1
position: 257170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:220069-220246:-1:exon

position:220069:-1
position: 220069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:220246:-1
position: 220246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:214510-217877:-1:exon

position:217877:-1
position: 217877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RAB43
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: RAB43
product: RAB43, member RAS oncogene family, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_033087457.1
SIO_010081: RAB43
subclass of: SO_0000673
so part of: RAB43
location: complement(join(214510..217877,220069..220252,257170..257535))
location: region:214510-257535:-1
so has part: feature:257170-257535:-1:exon
so has part: feature:220069-220252:-1:exon
so has part: feature:214510-217877:-1:exon

position:257535:-1
position: 257535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:257170-257535:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:220069-220252:-1:exon

position:220252:-1
position: 220252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:214510-217877:-1:exon

RAB43
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: RAB43
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rab-43 isoform X2
translation: MAGPGPGPGDPDEQYDFLFKLVLVGDASVGKTCVVQRFKTGAFSERQSSTIGVDFTMKTLEIQGKRVKIWDTAGQERFRTITQSYYRSANGAILAYDITKRSSFLSVPHWIADVRKYAGSNIVQLLIGNKSDLGELREVPLAEAQSLAEHYDILCAIETSAKDSSNVEEAFMRVATELVMRHGGPLLSEKSTDHIQLDSKDIGENWGCGC
SIO_010081: RAB43
subclass of: SO_0000673
so part of: RAB43
location: complement(join(217627..217877,220069..220246,257170..257373))
location: region:217627-257373:-1
so has part: feature:257170-257373:-1:exon
so has part: feature:220069-220246:-1:exon
so has part: feature:217627-217877:-1:exon

XP_032943349.1
type: Protein
SIO_000068: ncbiprotein

position:217627:-1
position: 217627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:257373:-1
position: 257373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:257170-257373:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:220069-220246:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:217627-217877:-1:exon

RAB43
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: RAB43
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rab-43 isoform X1
translation: MAGPGPGPGDPDEQYDFLFKLVLVGDASVGKTCVVQRFKTGAFSERQSSTIGVDFTMKTLEIQGKRVKLQIWDTAGQERFRTITQSYYRSANGAILAYDITKRSSFLSVPHWIADVRKYAGSNIVQLLIGNKSDLGELREVPLAEAQSLAEHYDILCAIETSAKDSSNVEEAFMRVATELVMRHGGPLLSEKSTDHIQLDSKDIGENWGCGC
SIO_010081: RAB43
subclass of: SO_0000673
so part of: RAB43
location: complement(join(217627..217877,220069..220252,257170..257373))
location: region:217627-257373:-1
so has part: feature:257170-257373:-1:exon
so has part: feature:220069-220252:-1:exon
so has part: feature:217627-217877:-1:exon

XP_032943348.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:257170-257373:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:220069-220252:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:217627-217877:-1:exon

LOC117011744
type: Gene
subclass of: SO_0000704
RO_0002162: 59479
gene: LOC117011744
note: uncharacterized LOC117011744; Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 231461..247667
location: region:231461-247667:1
so has part: feature:231461-247667:1:exon

117011744
type: Gene
SIO_000068: ncbigene

position:231461:1
position: 231461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:247667:1
position: 247667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:231461-247667:1:exon

LOC117011744
type: Exon
subclass of: SO_0000147
RO_0002162: 59479
gene: LOC117011744
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 9% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117011744
subclass of: SO_0000673
so part of: LOC117011744
location: 231461..231696
location: region:231461-231696:1
so has part: feature:231461-231696:1:exon

position:231696:1
position: 231696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:231461-231696:1:exon

LOC117011744
type: Exon
subclass of: SO_0000147
RO_0002162: 59479
gene: LOC117011744
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 9% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117011744
subclass of: SO_0000673
so part of: LOC117011744
location: 236971..237097
location: region:236971-237097:1
so has part: feature:236971-237097:1:exon

position:236971:1
position: 236971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:237097:1
position: 237097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:236971-237097:1:exon

LOC117011744
type: Exon
subclass of: SO_0000147
RO_0002162: 59479
gene: LOC117011744
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 9% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117011744
subclass of: SO_0000673
so part of: LOC117011744
location: 238303..238366
location: region:238303-238366:1
so has part: feature:238303-238366:1:exon

position:238303:1
position: 238303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:238366:1
position: 238366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:238303-238366:1:exon

LOC117011744
type: Exon
subclass of: SO_0000147
RO_0002162: 59479
gene: LOC117011744
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 9% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117011744
subclass of: SO_0000673
so part of: LOC117011744
location: 247118..247667
location: region:247118-247667:1
so has part: feature:247118-247667:1:exon

position:247118:1
position: 247118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:247118-247667:1:exon

ISY1
type: Gene
subclass of: SO_0000704
RO_0002162: 59479
gene: ISY1
note: ISY1 splicing factor homolog; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(264894..299965)
location: region:264894-299965:-1
so has part: feature:264894-299965:-1:exon
subclass of: SO_0000010

117011774
type: Gene
SIO_000068: ncbigene

position:264894:-1
position: 264894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:299965:-1
position: 299965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:264894-299965:-1:exon

ISY1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: ISY1
product: ISY1 splicing factor homolog, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_033087460.1
SIO_010081: ISY1
subclass of: SO_0000673
so part of: ISY1
location: complement(join(264894..265392,266674..266760,276891..277012,284037..284154,286775..286887,295979..296021,296224..296289,297025..297076,297659..297681,299766..299965))
location: region:264894-299965:-1
so has part: feature:299766-299965:-1:exon
so has part: feature:297659-297681:-1:exon
so has part: feature:297025-297076:-1:exon
so has part: feature:296224-296289:-1:exon
so has part: feature:295979-296021:-1:exon
so has part: feature:286775-286887:-1:exon
so has part: feature:284037-284154:-1:exon
so has part: feature:276891-277012:-1:exon
so has part: feature:266674-266760:-1:exon
so has part: feature:264894-265392:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:299766-299965:-1:exon

position:299766:-1
position: 299766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:297659-297681:-1:exon

position:297659:-1
position: 297659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:297681:-1
position: 297681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:297025-297076:-1:exon

position:297025:-1
position: 297025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:297076:-1
position: 297076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:296224-296289:-1:exon

position:296224:-1
position: 296224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:296289:-1
position: 296289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:295979-296021:-1:exon

position:295979:-1
position: 295979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:296021:-1
position: 296021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:286775-286887:-1:exon

position:286775:-1
position: 286775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:286887:-1
position: 286887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:284037-284154:-1:exon

position:284037:-1
position: 284037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:284154:-1
position: 284154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:276891-277012:-1:exon

position:276891:-1
position: 276891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:277012:-1
position: 277012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:266674-266760:-1:exon

position:266674:-1
position: 266674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:266760:-1
position: 266760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:264894-265392:-1:exon

position:265392:-1
position: 265392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ISY1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: ISY1
product: ISY1 splicing factor homolog, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_033087459.1
SIO_010081: ISY1
subclass of: SO_0000673
so part of: ISY1
location: complement(join(264894..265392,266674..266760,276891..277012,277820..277942,284037..284154,286775..286887,295979..296021,296224..296289,297025..297076,299766..299956))
location: region:264894-299956:-1
so has part: feature:299766-299956:-1:exon
so has part: feature:297025-297076:-1:exon
so has part: feature:296224-296289:-1:exon
so has part: feature:295979-296021:-1:exon
so has part: feature:286775-286887:-1:exon
so has part: feature:284037-284154:-1:exon
so has part: feature:277820-277942:-1:exon
so has part: feature:276891-277012:-1:exon
so has part: feature:266674-266760:-1:exon
so has part: feature:264894-265392:-1:exon

position:299956:-1
position: 299956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:299766-299956:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:297025-297076:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:296224-296289:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:295979-296021:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:286775-286887:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:284037-284154:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:277820-277942:-1:exon

position:277820:-1
position: 277820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:277942:-1
position: 277942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:276891-277012:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:266674-266760:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:264894-265392:-1:exon

ISY1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: ISY1
product: ISY1 splicing factor homolog, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_033087461.1
SIO_010081: ISY1
subclass of: SO_0000673
so part of: ISY1
location: complement(join(264894..265392,266674..266760,276891..277012,277820..277942,284037..284154,286775..286887,295979..296021,296224..296289,297025..297076,297659..297681,299766..299860))
location: region:264894-299860:-1
so has part: feature:299766-299860:-1:exon
so has part: feature:297659-297681:-1:exon
so has part: feature:297025-297076:-1:exon
so has part: feature:296224-296289:-1:exon
so has part: feature:295979-296021:-1:exon
so has part: feature:286775-286887:-1:exon
so has part: feature:284037-284154:-1:exon
so has part: feature:277820-277942:-1:exon
so has part: feature:276891-277012:-1:exon
so has part: feature:266674-266760:-1:exon
so has part: feature:264894-265392:-1:exon

position:299860:-1
position: 299860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:299766-299860:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:297659-297681:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:297025-297076:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:296224-296289:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:295979-296021:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:286775-286887:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:284037-284154:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:277820-277942:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:276891-277012:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:266674-266760:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:264894-265392:-1:exon

ISY1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: ISY1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pre-mRNA-splicing factor ISY1 homolog isoform X2
translation: MARNAEKAMTALARFRQAQLEEGKMKERRPFLASECTELPKAEKWRRQIIGEISKKVAQIQNAGLGEFRIRDLNDEINKLLREKGHWEIRIKELGGPDYGKVGPKMLDHEGKEVPGNRGYKYFGAAKDLPGVRELFEKELRAELVEKWKAEREARLARGEKEEEEEEEEEINIYAVTEEESDEEGSQEKGGEDGQQKFIAHVPVPSQQEIEEALVRRKKMELLQKYASETLQAQSEEARRLLGY
SIO_010081: ISY1
subclass of: SO_0000673
so part of: ISY1
location: complement(join(265285..265392,266674..266760,276891..277012,284037..284154,286775..286887,295979..296021,296224..296289,297025..297076,297659..297681,299766..299768))
location: region:265285-299768:-1
so has part: feature:299766-299768:-1:exon
so has part: feature:297659-297681:-1:exon
so has part: feature:297025-297076:-1:exon
so has part: feature:296224-296289:-1:exon
so has part: feature:295979-296021:-1:exon
so has part: feature:286775-286887:-1:exon
so has part: feature:284037-284154:-1:exon
so has part: feature:276891-277012:-1:exon
so has part: feature:266674-266760:-1:exon
so has part: feature:265285-265392:-1:exon

XP_032943351.1
type: Protein
SIO_000068: ncbiprotein

position:265285:-1
position: 265285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:299768:-1
position: 299768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:299766-299768:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:297659-297681:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:297025-297076:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:296224-296289:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:295979-296021:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:286775-286887:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:284037-284154:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:276891-277012:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:266674-266760:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:265285-265392:-1:exon

ISY1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: ISY1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pre-mRNA-splicing factor ISY1 homolog isoform X3
translation: MARNAEKAMTALARFRQAQLEEGKMKERRPFLASECTELPKAEKWRRQIIGEISKKVAQIQNAGLGEFRIRDLNDEINKLLREKGHWEIRIKELGGPDYGKVGPKMLDHEGKEVPGNRGYKYFGAAKDLPGVRELFEKEPLPPPRKTRAELMKAIDFEYYGYLDEDDGVIVPLEQEYEKKLRAELVEKWKAEREARLARGEKEEEEEEEEEINIYAVTEEESDEEGSQEKGGEDGQQKFIAHVPVPSQQEIEEALVRRKKMELLQKYASETLQAQSEEARRLLGY
SIO_010081: ISY1
subclass of: SO_0000673
so part of: ISY1
location: complement(join(265285..265392,266674..266760,276891..277012,277820..277942,284037..284154,286775..286887,295979..296021,296224..296289,297025..297076,297659..297681,299766..299768))
location: region:265285-299768:-1
so has part: feature:299766-299768:-1:exon
so has part: feature:297659-297681:-1:exon
so has part: feature:297025-297076:-1:exon
so has part: feature:296224-296289:-1:exon
so has part: feature:295979-296021:-1:exon
so has part: feature:286775-286887:-1:exon
so has part: feature:284037-284154:-1:exon
so has part: feature:277820-277942:-1:exon
so has part: feature:276891-277012:-1:exon
so has part: feature:266674-266760:-1:exon
so has part: feature:265285-265392:-1:exon

XP_032943352.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:299766-299768:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:297659-297681:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:297025-297076:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:296224-296289:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:295979-296021:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:286775-286887:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:284037-284154:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:277820-277942:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:276891-277012:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:266674-266760:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:265285-265392:-1:exon

ISY1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: ISY1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pre-mRNA-splicing factor ISY1 homolog isoform X1
translation: MKERRPFLASECTELPKAEKWRRQIIGEISKKVAQIQNAGLGEFRIRDLNDEINKLLREKGHWEIRIKELGGPDYGKVGPKMLDHEGKEVPGNRGYKYFGAAKDLPGVRELFEKEPLPPPRKTRAELMKAIDFEYYGYLDEDDGVIVPLEQEYEKKLRAELVEKWKAEREARLARGEKEEEEEEEEEINIYAVTEEESDEEGSQEKGGEDGQQKFIAHVPVPSQQEIEEALVRRKKMELLQKYASETLQAQSEEARRLLGY
SIO_010081: ISY1
subclass of: SO_0000673
so part of: ISY1
location: complement(join(265285..265392,266674..266760,276891..277012,277820..277942,284037..284154,286775..286887,295979..296021,296224..296289,297025..297030))
location: region:265285-297030:-1
so has part: feature:297025-297030:-1:exon
so has part: feature:296224-296289:-1:exon
so has part: feature:295979-296021:-1:exon
so has part: feature:286775-286887:-1:exon
so has part: feature:284037-284154:-1:exon
so has part: feature:277820-277942:-1:exon
so has part: feature:276891-277012:-1:exon
so has part: feature:266674-266760:-1:exon
so has part: feature:265285-265392:-1:exon

XP_032943350.1
type: Protein
SIO_000068: ncbiprotein

position:297030:-1
position: 297030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:297025-297030:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:296224-296289:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:295979-296021:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:286775-286887:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:284037-284154:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:277820-277942:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:276891-277012:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:266674-266760:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:265285-265392:-1:exon

CNBP
type: Gene
subclass of: SO_0000704
RO_0002162: 59479
gene: CNBP
note: CCHC-type zinc finger nucleic acid binding protein; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(311552..328712)
location: region:311552-328712:-1
so has part: feature:311552-328712:-1:exon
subclass of: SO_0000010

117011656
type: Gene
SIO_000068: ncbigene

position:311552:-1
position: 311552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:328712:-1
position: 328712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:311552-328712:-1:exon

CNBP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: CNBP
product: CCHC-type zinc finger nucleic acid binding protein, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_033087143.1
SIO_010081: CNBP
subclass of: SO_0000673
so part of: CNBP
location: complement(join(311552..319859,320834..321035,321204..321296,321413..321532,328539..328712))
location: region:311552-328712:-1
so has part: feature:328539-328712:-1:exon
so has part: feature:321413-321532:-1:exon
so has part: feature:321204-321296:-1:exon
so has part: feature:320834-321035:-1:exon
so has part: feature:311552-319859:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:328539-328712:-1:exon

position:328539:-1
position: 328539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:321413-321532:-1:exon

position:321413:-1
position: 321413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:321532:-1
position: 321532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:321204-321296:-1:exon

position:321204:-1
position: 321204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:321296:-1
position: 321296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:320834-321035:-1:exon

position:320834:-1
position: 320834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:321035:-1
position: 321035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:311552-319859:-1:exon

position:319859:-1
position: 319859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CNBP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: CNBP
product: CCHC-type zinc finger nucleic acid binding protein, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_033087145.1
SIO_010081: CNBP
subclass of: SO_0000673
so part of: CNBP
location: complement(join(311552..319859,320834..321035,321204..321296,321416..321532,328539..328709))
location: region:311552-328709:-1
so has part: feature:328539-328709:-1:exon
so has part: feature:321416-321532:-1:exon
so has part: feature:321204-321296:-1:exon
so has part: feature:320834-321035:-1:exon
so has part: feature:311552-319859:-1:exon

position:328709:-1
position: 328709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:328539-328709:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:321416-321532:-1:exon

position:321416:-1
position: 321416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:321204-321296:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:320834-321035:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:311552-319859:-1:exon

CNBP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: CNBP
product: CCHC-type zinc finger nucleic acid binding protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_033087141.1
SIO_010081: CNBP
subclass of: SO_0000673
so part of: CNBP
location: complement(join(311552..319859,320834..321035,321204..321296,321395..321532,328539..328708))
location: region:311552-328708:-1
so has part: feature:328539-328708:-1:exon
so has part: feature:321395-321532:-1:exon
so has part: feature:321204-321296:-1:exon
so has part: feature:320834-321035:-1:exon
so has part: feature:311552-319859:-1:exon

position:328708:-1
position: 328708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:328539-328708:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:321395-321532:-1:exon

position:321395:-1
position: 321395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:321204-321296:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:320834-321035:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:311552-319859:-1:exon

CNBP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: CNBP
product: CCHC-type zinc finger nucleic acid binding protein, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_033087144.1
SIO_010081: CNBP
subclass of: SO_0000673
so part of: CNBP
location: complement(join(311552..319859,320834..321032,321204..321296,321413..321532,328539..328705))
location: region:311552-328705:-1
so has part: feature:328539-328705:-1:exon
so has part: feature:321413-321532:-1:exon
so has part: feature:321204-321296:-1:exon
so has part: feature:320834-321032:-1:exon
so has part: feature:311552-319859:-1:exon

position:328705:-1
position: 328705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:328539-328705:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:321413-321532:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:321204-321296:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:320834-321032:-1:exon

position:321032:-1
position: 321032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:311552-319859:-1:exon

CNBP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: CNBP
product: CCHC-type zinc finger nucleic acid binding protein, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_033087146.1
SIO_010081: CNBP
subclass of: SO_0000673
so part of: CNBP
location: complement(join(311552..319859,320834..321032,321204..321296,321416..321532,328539..328702))
location: region:311552-328702:-1
so has part: feature:328539-328702:-1:exon
so has part: feature:321416-321532:-1:exon
so has part: feature:321204-321296:-1:exon
so has part: feature:320834-321032:-1:exon
so has part: feature:311552-319859:-1:exon

position:328702:-1
position: 328702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:328539-328702:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:321416-321532:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:321204-321296:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:320834-321032:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:311552-319859:-1:exon

CNBP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: CNBP
product: CCHC-type zinc finger nucleic acid binding protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_033087142.1
SIO_010081: CNBP
subclass of: SO_0000673
so part of: CNBP
location: complement(join(311552..319859,320834..321032,321204..321296,321395..321532,328539..328701))
location: region:311552-328701:-1
so has part: feature:328539-328701:-1:exon
so has part: feature:321395-321532:-1:exon
so has part: feature:321204-321296:-1:exon
so has part: feature:320834-321032:-1:exon
so has part: feature:311552-319859:-1:exon

position:328701:-1
position: 328701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:328539-328701:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:321395-321532:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:321204-321296:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:320834-321032:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:311552-319859:-1:exon

CNBP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: CNBP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CCHC-type zinc finger nucleic acid binding protein isoform X6
translation: MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVTSSLPDICYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA
SIO_010081: CNBP
subclass of: SO_0000673
so part of: CNBP
location: complement(join(319742..319859,320834..321032,321204..321296,321416..321518))
location: region:319742-321518:-1
so has part: feature:321416-321518:-1:exon
so has part: feature:321204-321296:-1:exon
so has part: feature:320834-321032:-1:exon
so has part: feature:319742-319859:-1:exon

XP_032943037.1
type: Protein
SIO_000068: ncbiprotein

position:319742:-1
position: 319742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:321518:-1
position: 321518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:321416-321518:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:321204-321296:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:320834-321032:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:319742-319859:-1:exon

CNBP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: CNBP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CCHC-type zinc finger nucleic acid binding protein isoform X5
translation: MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVTSSLPDICYRCGESGHLAKDCDLQEDEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA
SIO_010081: CNBP
subclass of: SO_0000673
so part of: CNBP
location: complement(join(319742..319859,320834..321035,321204..321296,321416..321518))
location: region:319742-321518:-1
so has part: feature:321416-321518:-1:exon
so has part: feature:321204-321296:-1:exon
so has part: feature:320834-321035:-1:exon
so has part: feature:319742-319859:-1:exon

XP_032943036.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:321416-321518:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:321204-321296:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:320834-321035:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:319742-319859:-1:exon

CNBP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: CNBP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CCHC-type zinc finger nucleic acid binding protein isoform X4
translation: MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFQFVTSSLPDICYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA
SIO_010081: CNBP
subclass of: SO_0000673
so part of: CNBP
location: complement(join(319742..319859,320834..321032,321204..321296,321413..321518))
location: region:319742-321518:-1
so has part: feature:321413-321518:-1:exon
so has part: feature:321204-321296:-1:exon
so has part: feature:320834-321032:-1:exon
so has part: feature:319742-319859:-1:exon

XP_032943035.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:321413-321518:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:321204-321296:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:320834-321032:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:319742-319859:-1:exon

CNBP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: CNBP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CCHC-type zinc finger nucleic acid binding protein isoform X3
translation: MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFQFVTSSLPDICYRCGESGHLAKDCDLQEDEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA
SIO_010081: CNBP
subclass of: SO_0000673
so part of: CNBP
location: complement(join(319742..319859,320834..321035,321204..321296,321413..321518))
location: region:319742-321518:-1
so has part: feature:321413-321518:-1:exon
so has part: feature:321204-321296:-1:exon
so has part: feature:320834-321035:-1:exon
so has part: feature:319742-319859:-1:exon

XP_032943034.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:321413-321518:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:321204-321296:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:320834-321035:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:319742-319859:-1:exon

CNBP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: CNBP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CCHC-type zinc finger nucleic acid binding protein isoform X2
translation: MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVTSSLPDICYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA
SIO_010081: CNBP
subclass of: SO_0000673
so part of: CNBP
location: complement(join(319742..319859,320834..321032,321204..321296,321395..321518))
location: region:319742-321518:-1
so has part: feature:321395-321518:-1:exon
so has part: feature:321204-321296:-1:exon
so has part: feature:320834-321032:-1:exon
so has part: feature:319742-319859:-1:exon

XP_032943033.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:321395-321518:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:321204-321296:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:320834-321032:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:319742-319859:-1:exon

CNBP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: CNBP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CCHC-type zinc finger nucleic acid binding protein isoform X1
translation: MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVTSSLPDICYRCGESGHLAKDCDLQEDEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA
SIO_010081: CNBP
subclass of: SO_0000673
so part of: CNBP
location: complement(join(319742..319859,320834..321035,321204..321296,321395..321518))
location: region:319742-321518:-1
so has part: feature:321395-321518:-1:exon
so has part: feature:321204-321296:-1:exon
so has part: feature:320834-321035:-1:exon
so has part: feature:319742-319859:-1:exon

XP_032943032.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:321395-321518:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:321204-321296:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:320834-321035:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:319742-319859:-1:exon

LOC117011942
type: Gene
subclass of: SO_0000704
RO_0002162: 59479
gene: LOC117011942
note: proliferating cell nuclear antigen-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 339497..340247
location: region:339497-340247:1
so has part: feature:339497-340247:1:exon
subclass of: SO_0000010

117011942
type: Gene
SIO_000068: ncbigene

position:339497:1
position: 339497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:340247:1
position: 340247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:339497-340247:1:exon

LOC117011942
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: LOC117011942
product: proliferating cell nuclear antigen-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 43% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033087792.1
SIO_010081: LOC117011942
subclass of: SO_0000673
so part of: LOC117011942
location: 339497..340247
location: region:339497-340247:1
so has part: feature:339497-340247:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:339497-340247:1:exon

LOC117011942
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: LOC117011942
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: proliferating cell nuclear antigen-like
translation: MFEMRLVQGSILEALKDLINEACWDISSSSVNLQSMDXTLRSKGFHTYHCDHNLAMGVNVTSMSKILKCASNEDIITLRAEDNVNMLTFVFEAPNQENLSDYEMKLIDLDVEQLGIPEQEYSCVVKMPSGEFARVCRDLSHIGDGIVISCAKDGVKFSASGELGNGNIKLSQTSNVDKEEMNEPVQLTFALRYLNFFTKATSLSPTITLSMSADVPLVVEYKIADMGHLKYYLAPKIEDEVGS
SIO_010081: LOC117011942
subclass of: SO_0000673
so part of: LOC117011942
location: 339497..340227
location: region:339497-340227:1
so has part: feature:339497-340227:1:exon

XP_032943683.1
type: Protein
SIO_000068: ncbiprotein

position:340227:1
position: 340227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:339497-340227:1:exon

COPG1
type: Gene
subclass of: SO_0000704
RO_0002162: 59479
gene: COPG1
note: COPI coat complex subunit gamma 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 373187..396104
location: region:373187-396104:1
so has part: feature:373187-396104:1:exon
subclass of: SO_0000010

117011700
type: Gene
SIO_000068: ncbigene

position:373187:1
position: 373187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:396104:1
position: 396104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:373187-396104:1:exon

COPG1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: COPG1
product: COPI coat complex subunit gamma 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 mRNAs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_033087207.1
SIO_010081: COPG1
subclass of: SO_0000673
so part of: COPG1
location: join(373187..373335,374276..374328,374798..374878,375089..375160,375345..375424,376592..376667,376932..377024,377451..377537,378842..378999,379108..379241,381138..381205,381467..381655,383049..383144,383769..384012,385135..385210,386322..386425,386904..387029,387333..387401,390328..390470,390794..390965,391660..391757,393527..393665,393873..393971,395623..396104)
location: region:373187-396104:1
so has part: feature:373187-373335:1:exon
so has part: feature:374276-374328:1:exon
so has part: feature:374798-374878:1:exon
so has part: feature:375089-375160:1:exon
so has part: feature:375345-375424:1:exon
so has part: feature:376592-376667:1:exon
so has part: feature:376932-377024:1:exon
so has part: feature:377451-377537:1:exon
so has part: feature:378842-378999:1:exon
so has part: feature:379108-379241:1:exon
so has part: feature:381138-381205:1:exon
so has part: feature:381467-381655:1:exon
so has part: feature:383049-383144:1:exon
so has part: feature:383769-384012:1:exon
so has part: feature:385135-385210:1:exon
so has part: feature:386322-386425:1:exon
so has part: feature:386904-387029:1:exon
so has part: feature:387333-387401:1:exon
so has part: feature:390328-390470:1:exon
so has part: feature:390794-390965:1:exon
so has part: feature:391660-391757:1:exon
so has part: feature:393527-393665:1:exon
so has part: feature:393873-393971:1:exon
so has part: feature:395623-396104:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:373187-373335:1:exon

position:373335:1
position: 373335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:374276-374328:1:exon

position:374276:1
position: 374276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:374328:1
position: 374328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:374798-374878:1:exon

position:374798:1
position: 374798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:374878:1
position: 374878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:375089-375160:1:exon

position:375089:1
position: 375089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:375160:1
position: 375160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:375345-375424:1:exon

position:375345:1
position: 375345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:375424:1
position: 375424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:376592-376667:1:exon

position:376592:1
position: 376592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:376667:1
position: 376667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:376932-377024:1:exon

position:376932:1
position: 376932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:377024:1
position: 377024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:377451-377537:1:exon

position:377451:1
position: 377451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:377537:1
position: 377537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:378842-378999:1:exon

position:378842:1
position: 378842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:378999:1
position: 378999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:379108-379241:1:exon

position:379108:1
position: 379108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:379241:1
position: 379241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:381138-381205:1:exon

position:381138:1
position: 381138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:381205:1
position: 381205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:381467-381655:1:exon

position:381467:1
position: 381467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:381655:1
position: 381655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:383049-383144:1:exon

position:383049:1
position: 383049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:383144:1
position: 383144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:383769-384012:1:exon

position:383769:1
position: 383769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:384012:1
position: 384012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:385135-385210:1:exon

position:385135:1
position: 385135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:385210:1
position: 385210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:386322-386425:1:exon

position:386322:1
position: 386322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:386425:1
position: 386425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:386904-387029:1:exon

position:386904:1
position: 386904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:387029:1
position: 387029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:387333-387401:1:exon

position:387333:1
position: 387333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:387401:1
position: 387401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:390328-390470:1:exon

position:390328:1
position: 390328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:390470:1
position: 390470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:390794-390965:1:exon

position:390794:1
position: 390794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:390965:1
position: 390965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:391660-391757:1:exon

position:391660:1
position: 391660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:391757:1
position: 391757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:393527-393665:1:exon

position:393527:1
position: 393527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:393665:1
position: 393665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:393873-393971:1:exon

position:393873:1
position: 393873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:393971:1
position: 393971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:395623-396104:1:exon

position:395623:1
position: 395623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

COPG1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: COPG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coatomer subunit gamma-1
translation: MLKKFDKKDEESGGGSNPFQHLEKSAVLQEARVFNETPINPRKCAHILTKILYLINQGEHLGTTEATEAFFAMTKLFQSSDPTLRRMCYLTIKEMSSIAEDVIIVTSSLTKDMTGKEDNYRGPAVRALCQITDSTMLQAIERYMKQAIVDKVPSVSSSALVSSLHLLKCSFDMVKRWVNEAQEAASSDNIMVQYHALGLLYHVRKNDRLAVNKMISKFTRHGLKSPFAYCMMIRVASKQLEEEDGSRDSPMFDFIESCLRNKHEMVVYEAASAVVNLPGCSAKELAPAVSVLQLFCSSPKAALRYAAVRTLNKVAMKHPSAVTACNLDLENLVTDSNRSIATLAITTLLKTGSESSIDRLMKQISSFMSEISDEFKVVVVQAISALCQKYPRKHAVLMNFLFTMLREEGGFEYKRAIVDCIISIIEENSESKETGLSHLCEFIEDCEFTVLATRILHLLGQEGPKTNNPSKYIRFIYNRVVLEHEEVRAGAVSALAKFGAQNEAMLPSILVLLKRCVMDDDNEVRDRATFYLNVLEQKQKALNAGYILNGLTVSIPGLERALQQYTLEPSEKPFDLKSVPLATTPMAEQRTESTPITAAKQPEKMATTRQEIFQEQLAAVPEFHGLGPLFKSSPEPVALTESETEYVIQCTKHTFTDHMVFQFDCTNTLNDQTLEYVTVQMEPTEAYEVLCYVPARSLPYNQPGTCYTLVALPKEDPTAVACTFSCMMKFTVKDCDPTTGETDDEGYEDEYVLEDLEVTIADHIQKVMKLNFEAAWDEVGEEFEKEETFTLSTIKTLEEAVGNIVKFLGMHPCERSDKVPDNKNTHMLLLAGVFRGGHDILVRSRLLLLDTVTMQVTARSSEELPVDIILASVG
SIO_010081: COPG1
subclass of: SO_0000673
so part of: COPG1
location: join(373299..373335,374276..374328,374798..374878,375089..375160,375345..375424,376592..376667,376932..377024,377451..377537,378842..378999,379108..379241,381138..381205,381467..381655,383049..383144,383769..384012,385135..385210,386322..386425,386904..387029,387333..387401,390328..390470,390794..390965,391660..391757,393527..393665,393873..393971,395623..395753)
location: region:373299-395753:1
so has part: feature:373299-373335:1:exon
so has part: feature:374276-374328:1:exon
so has part: feature:374798-374878:1:exon
so has part: feature:375089-375160:1:exon
so has part: feature:375345-375424:1:exon
so has part: feature:376592-376667:1:exon
so has part: feature:376932-377024:1:exon
so has part: feature:377451-377537:1:exon
so has part: feature:378842-378999:1:exon
so has part: feature:379108-379241:1:exon
so has part: feature:381138-381205:1:exon
so has part: feature:381467-381655:1:exon
so has part: feature:383049-383144:1:exon
so has part: feature:383769-384012:1:exon
so has part: feature:385135-385210:1:exon
so has part: feature:386322-386425:1:exon
so has part: feature:386904-387029:1:exon
so has part: feature:387333-387401:1:exon
so has part: feature:390328-390470:1:exon
so has part: feature:390794-390965:1:exon
so has part: feature:391660-391757:1:exon
so has part: feature:393527-393665:1:exon
so has part: feature:393873-393971:1:exon
so has part: feature:395623-395753:1:exon

XP_032943098.1
type: Protein
SIO_000068: ncbiprotein

position:373299:1
position: 373299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:395753:1
position: 395753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:373299-373335:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:374276-374328:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:374798-374878:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:375089-375160:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:375345-375424:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:376592-376667:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:376932-377024:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:377451-377537:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:378842-378999:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:379108-379241:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:381138-381205:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:381467-381655:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:383049-383144:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:383769-384012:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:385135-385210:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:386322-386425:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:386904-387029:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:387333-387401:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:390328-390470:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:390794-390965:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:391660-391757:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:393527-393665:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:393873-393971:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:395623-395753:1:exon

HMCES
type: Gene
subclass of: SO_0000704
RO_0002162: 59479
gene: HMCES
note: 5-hydroxymethylcytosine binding, ES cell specific; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 397590..423100
location: region:397590-423100:1
so has part: feature:397590-423100:1:exon
subclass of: SO_0000010

117011904
type: Gene
SIO_000068: ncbigene

position:397590:1
position: 397590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:423100:1
position: 423100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:397590-423100:1:exon

HMCES
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: HMCES
product: 5-hydroxymethylcytosine binding, ES cell specific, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_033087663.1
SIO_010081: HMCES
subclass of: SO_0000673
so part of: HMCES
location: join(397590..397692,398770..398975,405878..406021,406896..407021,416028..416209,420671..420863,422322..423100)
location: region:397590-423100:1
so has part: feature:397590-397692:1:exon
so has part: feature:398770-398975:1:exon
so has part: feature:405878-406021:1:exon
so has part: feature:406896-407021:1:exon
so has part: feature:416028-416209:1:exon
so has part: feature:420671-420863:1:exon
so has part: feature:422322-423100:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:397590-397692:1:exon

position:397692:1
position: 397692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:398770-398975:1:exon

position:398770:1
position: 398770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:398975:1
position: 398975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:405878-406021:1:exon

position:405878:1
position: 405878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:406021:1
position: 406021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:406896-407021:1:exon

position:406896:1
position: 406896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:407021:1
position: 407021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:416028-416209:1:exon

position:416028:1
position: 416028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:416209:1
position: 416209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:420671-420863:1:exon

position:420671:1
position: 420671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:420863:1
position: 420863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:422322-423100:1:exon

position:422322:1
position: 422322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HMCES
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: HMCES
product: 5-hydroxymethylcytosine binding, ES cell specific, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_033087667.1
SIO_010081: HMCES
subclass of: SO_0000673
so part of: HMCES
location: join(397624..397728,398770..398975,405878..406021,416028..416209,420671..420863,422322..423100)
location: region:397624-423100:1
so has part: feature:397624-397728:1:exon
so has part: feature:398770-398975:1:exon
so has part: feature:405878-406021:1:exon
so has part: feature:416028-416209:1:exon
so has part: feature:420671-420863:1:exon
so has part: feature:422322-423100:1:exon

position:397624:1
position: 397624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:397624-397728:1:exon

position:397728:1
position: 397728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:398770-398975:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:405878-406021:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:416028-416209:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:420671-420863:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:422322-423100:1:exon

HMCES
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: HMCES
product: 5-hydroxymethylcytosine binding, ES cell specific, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_033087662.1
SIO_010081: HMCES
subclass of: SO_0000673
so part of: HMCES
location: join(397625..397728,398770..398975,405878..406021,406896..407021,416028..416209,420671..420863,422322..423100)
location: region:397625-423100:1
so has part: feature:397625-397728:1:exon
so has part: feature:398770-398975:1:exon
so has part: feature:405878-406021:1:exon
so has part: feature:406896-407021:1:exon
so has part: feature:416028-416209:1:exon
so has part: feature:420671-420863:1:exon
so has part: feature:422322-423100:1:exon

position:397625:1
position: 397625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:397625-397728:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:398770-398975:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:405878-406021:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:406896-407021:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:416028-416209:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:420671-420863:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:422322-423100:1:exon

HMCES
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: HMCES
product: 5-hydroxymethylcytosine binding, ES cell specific, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_033087665.1
SIO_010081: HMCES
subclass of: SO_0000673
so part of: HMCES
location: join(397677..397762,398770..398975,405878..406021,406896..407021,416028..416209,420671..420863,422322..423100)
location: region:397677-423100:1
so has part: feature:397677-397762:1:exon
so has part: feature:398770-398975:1:exon
so has part: feature:405878-406021:1:exon
so has part: feature:406896-407021:1:exon
so has part: feature:416028-416209:1:exon
so has part: feature:420671-420863:1:exon
so has part: feature:422322-423100:1:exon

position:397677:1
position: 397677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:397677-397762:1:exon

position:397762:1
position: 397762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:398770-398975:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:405878-406021:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:406896-407021:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:416028-416209:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:420671-420863:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:422322-423100:1:exon

HMCES
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: HMCES
product: 5-hydroxymethylcytosine binding, ES cell specific, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_033087664.1
SIO_010081: HMCES
subclass of: SO_0000673
so part of: HMCES
location: join(397735..397789,398770..398975,405878..406021,406896..407021,416028..416209,420671..420863,422322..423100)
location: region:397735-423100:1
so has part: feature:397735-397789:1:exon
so has part: feature:398770-398975:1:exon
so has part: feature:405878-406021:1:exon
so has part: feature:406896-407021:1:exon
so has part: feature:416028-416209:1:exon
so has part: feature:420671-420863:1:exon
so has part: feature:422322-423100:1:exon

position:397735:1
position: 397735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:397735-397789:1:exon

position:397789:1
position: 397789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:398770-398975:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:405878-406021:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:406896-407021:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:416028-416209:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:420671-420863:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:422322-423100:1:exon

HMCES
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: HMCES
product: 5-hydroxymethylcytosine binding, ES cell specific, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_033087666.1
SIO_010081: HMCES
subclass of: SO_0000673
so part of: HMCES
location: join(397878..398058,398770..398975,405878..406021,406896..407021,416028..416209,420671..420863,422322..423100)
location: region:397878-423100:1
so has part: feature:397878-398058:1:exon
so has part: feature:398770-398975:1:exon
so has part: feature:405878-406021:1:exon
so has part: feature:406896-407021:1:exon
so has part: feature:416028-416209:1:exon
so has part: feature:420671-420863:1:exon
so has part: feature:422322-423100:1:exon

position:397878:1
position: 397878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:397878-398058:1:exon

position:398058:1
position: 398058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:398770-398975:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:405878-406021:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:406896-407021:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:416028-416209:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:420671-420863:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:422322-423100:1:exon

HMCES
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: HMCES
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: abasic site processing protein HMCES isoform X1
translation: MCGRTSCHLPRDVLTRACAYQDGQGQQRLPEWRDADKYCPSYNKSPQSNSPVLLSRLHFEKGADSSERIIAPMRWGLVPSWFKESDPSKLQFNTTNCRSDTIMEKRSFKMPLGKGRRCVVLADGFYEWQRCQGTSQRQPYFIYFPQIKTEKSANIGAARSPEDWEKIWDDWRLLTMAGIFDCWEPPEGGDCLYSYTIITVDSCKGLNDIHHRMPAILDGEEAVSKWLDFGKVSTQDALKLIHPIENITFHPVSTVVNNSQNNTPECLVPVNLLIKKDLKASGSSQKMLQWLATKSPKKEGPKIPQKAELDVPQWSTQSLQKRPFPTKRGSTGLLERWLKQEKEEEPVAKRPHSQ
SIO_010081: HMCES
subclass of: SO_0000673
so part of: HMCES
location: join(398793..398975,405878..406021,406896..407021,416028..416209,420671..420863,422322..422558)
location: region:398793-422558:1
so has part: feature:398793-398975:1:exon
so has part: feature:405878-406021:1:exon
so has part: feature:406896-407021:1:exon
so has part: feature:416028-416209:1:exon
so has part: feature:420671-420863:1:exon
so has part: feature:422322-422558:1:exon

XP_032943553.1
type: Protein
SIO_000068: ncbiprotein

position:398793:1
position: 398793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:422558:1
position: 422558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:398793-398975:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:405878-406021:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:406896-407021:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:416028-416209:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:420671-420863:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:422322-422558:1:exon

HMCES
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: HMCES
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: abasic site processing protein HMCES isoform X1
translation: MCGRTSCHLPRDVLTRACAYQDGQGQQRLPEWRDADKYCPSYNKSPQSNSPVLLSRLHFEKGADSSERIIAPMRWGLVPSWFKESDPSKLQFNTTNCRSDTIMEKRSFKMPLGKGRRCVVLADGFYEWQRCQGTSQRQPYFIYFPQIKTEKSANIGAARSPEDWEKIWDDWRLLTMAGIFDCWEPPEGGDCLYSYTIITVDSCKGLNDIHHRMPAILDGEEAVSKWLDFGKVSTQDALKLIHPIENITFHPVSTVVNNSQNNTPECLVPVNLLIKKDLKASGSSQKMLQWLATKSPKKEGPKIPQKAELDVPQWSTQSLQKRPFPTKRGSTGLLERWLKQEKEEEPVAKRPHSQ
SIO_010081: HMCES
subclass of: SO_0000673
so part of: HMCES
location: join(398793..398975,405878..406021,406896..407021,416028..416209,420671..420863,422322..422558)
location: region:398793-422558:1
so has part: feature:398793-398975:1:exon
so has part: feature:405878-406021:1:exon
so has part: feature:406896-407021:1:exon
so has part: feature:416028-416209:1:exon
so has part: feature:420671-420863:1:exon
so has part: feature:422322-422558:1:exon

XP_032943554.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:398793-398975:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:405878-406021:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:406896-407021:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:416028-416209:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:420671-420863:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:422322-422558:1:exon

HMCES
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: HMCES
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: abasic site processing protein HMCES isoform X1
translation: MCGRTSCHLPRDVLTRACAYQDGQGQQRLPEWRDADKYCPSYNKSPQSNSPVLLSRLHFEKGADSSERIIAPMRWGLVPSWFKESDPSKLQFNTTNCRSDTIMEKRSFKMPLGKGRRCVVLADGFYEWQRCQGTSQRQPYFIYFPQIKTEKSANIGAARSPEDWEKIWDDWRLLTMAGIFDCWEPPEGGDCLYSYTIITVDSCKGLNDIHHRMPAILDGEEAVSKWLDFGKVSTQDALKLIHPIENITFHPVSTVVNNSQNNTPECLVPVNLLIKKDLKASGSSQKMLQWLATKSPKKEGPKIPQKAELDVPQWSTQSLQKRPFPTKRGSTGLLERWLKQEKEEEPVAKRPHSQ
SIO_010081: HMCES
subclass of: SO_0000673
so part of: HMCES
location: join(398793..398975,405878..406021,406896..407021,416028..416209,420671..420863,422322..422558)
location: region:398793-422558:1
so has part: feature:398793-398975:1:exon
so has part: feature:405878-406021:1:exon
so has part: feature:406896-407021:1:exon
so has part: feature:416028-416209:1:exon
so has part: feature:420671-420863:1:exon
so has part: feature:422322-422558:1:exon

XP_032943555.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:398793-398975:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:405878-406021:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:406896-407021:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:416028-416209:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:420671-420863:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:422322-422558:1:exon

HMCES
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: HMCES
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: abasic site processing protein HMCES isoform X1
translation: MCGRTSCHLPRDVLTRACAYQDGQGQQRLPEWRDADKYCPSYNKSPQSNSPVLLSRLHFEKGADSSERIIAPMRWGLVPSWFKESDPSKLQFNTTNCRSDTIMEKRSFKMPLGKGRRCVVLADGFYEWQRCQGTSQRQPYFIYFPQIKTEKSANIGAARSPEDWEKIWDDWRLLTMAGIFDCWEPPEGGDCLYSYTIITVDSCKGLNDIHHRMPAILDGEEAVSKWLDFGKVSTQDALKLIHPIENITFHPVSTVVNNSQNNTPECLVPVNLLIKKDLKASGSSQKMLQWLATKSPKKEGPKIPQKAELDVPQWSTQSLQKRPFPTKRGSTGLLERWLKQEKEEEPVAKRPHSQ
SIO_010081: HMCES
subclass of: SO_0000673
so part of: HMCES
location: join(398793..398975,405878..406021,406896..407021,416028..416209,420671..420863,422322..422558)
location: region:398793-422558:1
so has part: feature:398793-398975:1:exon
so has part: feature:405878-406021:1:exon
so has part: feature:406896-407021:1:exon
so has part: feature:416028-416209:1:exon
so has part: feature:420671-420863:1:exon
so has part: feature:422322-422558:1:exon

XP_032943556.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:398793-398975:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:405878-406021:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:406896-407021:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:416028-416209:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:420671-420863:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:422322-422558:1:exon

HMCES
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: HMCES
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: abasic site processing protein HMCES isoform X1
translation: MCGRTSCHLPRDVLTRACAYQDGQGQQRLPEWRDADKYCPSYNKSPQSNSPVLLSRLHFEKGADSSERIIAPMRWGLVPSWFKESDPSKLQFNTTNCRSDTIMEKRSFKMPLGKGRRCVVLADGFYEWQRCQGTSQRQPYFIYFPQIKTEKSANIGAARSPEDWEKIWDDWRLLTMAGIFDCWEPPEGGDCLYSYTIITVDSCKGLNDIHHRMPAILDGEEAVSKWLDFGKVSTQDALKLIHPIENITFHPVSTVVNNSQNNTPECLVPVNLLIKKDLKASGSSQKMLQWLATKSPKKEGPKIPQKAELDVPQWSTQSLQKRPFPTKRGSTGLLERWLKQEKEEEPVAKRPHSQ
SIO_010081: HMCES
subclass of: SO_0000673
so part of: HMCES
location: join(398793..398975,405878..406021,406896..407021,416028..416209,420671..420863,422322..422558)
location: region:398793-422558:1
so has part: feature:398793-398975:1:exon
so has part: feature:405878-406021:1:exon
so has part: feature:406896-407021:1:exon
so has part: feature:416028-416209:1:exon
so has part: feature:420671-420863:1:exon
so has part: feature:422322-422558:1:exon

XP_032943557.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:398793-398975:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:405878-406021:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:406896-407021:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:416028-416209:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:420671-420863:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:422322-422558:1:exon

HMCES
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: HMCES
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: abasic site processing protein HMCES isoform X2
translation: MCGRTSCHLPRDVLTRACAYQDGQGQQRLPEWRDADKYCPSYNKSPQSNSPVLLSRLHFEKGADSSERIIAPMRWGLVPSWFKESDPSKLQFNTTNCRSDTIMEKRSFKSANIGAARSPEDWEKIWDDWRLLTMAGIFDCWEPPEGGDCLYSYTIITVDSCKGLNDIHHRMPAILDGEEAVSKWLDFGKVSTQDALKLIHPIENITFHPVSTVVNNSQNNTPECLVPVNLLIKKDLKASGSSQKMLQWLATKSPKKEGPKIPQKAELDVPQWSTQSLQKRPFPTKRGSTGLLERWLKQEKEEEPVAKRPHSQ
SIO_010081: HMCES
subclass of: SO_0000673
so part of: HMCES
location: join(398793..398975,405878..406021,416028..416209,420671..420863,422322..422558)
location: region:398793-422558:1
so has part: feature:398793-398975:1:exon
so has part: feature:405878-406021:1:exon
so has part: feature:416028-416209:1:exon
so has part: feature:420671-420863:1:exon
so has part: feature:422322-422558:1:exon

XP_032943558.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:398793-398975:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:405878-406021:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:416028-416209:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:420671-420863:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:422322-422558:1:exon

LOC117011892
type: Gene
subclass of: SO_0000704
RO_0002162: 59479
gene: LOC117011892
note: histone H1x; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(430635..432247)
location: region:430635-432247:-1
so has part: feature:430635-432247:-1:exon
subclass of: SO_0000010

117011892
type: Gene
SIO_000068: ncbigene

position:430635:-1
position: 430635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:432247:-1
position: 432247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:430635-432247:-1:exon

LOC117011892
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: LOC117011892
product: histone H1x
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033087640.1
SIO_010081: LOC117011892
subclass of: SO_0000673
so part of: LOC117011892
location: complement(430635..432247)
location: region:430635-432247:-1
so has part: feature:430635-432247:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:430635-432247:-1:exon

LOC117011892
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: LOC117011892
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone H1x
translation: MSVELEEALPLTTADGAAKKAAKAGGSAALSPSKKKKNKKKNQPGKYSQLVVETIRRLGERNGSSLAKIYTEAKKVAWFDQQNGRTYLKYSIKALVQNDTLLQVKGTGANGSFKLNRKKLDGSGERRGVPAAATVPAAAVHKAKKAAPGAAGTRCSDQNPAKGQKPEKRSHKKGVASKDKGGKAKAAAAAGKKVKKAAKPSVPKVPKGRK
SIO_010081: LOC117011892
subclass of: SO_0000673
so part of: LOC117011892
location: complement(431010..431642)
location: region:431010-431642:-1
so has part: feature:431010-431642:-1:exon

XP_032943531.1
type: Protein
SIO_000068: ncbiprotein

position:431010:-1
position: 431010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:431642:-1
position: 431642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:431010-431642:-1:exon

RAB7A
type: Gene
subclass of: SO_0000704
RO_0002162: 59479
gene: RAB7A
note: RAB7A, member RAS oncogene family; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(487303..583175)
location: region:487303-583175:-1
so has part: feature:487303-583175:-1:exon
subclass of: SO_0000010

117011646
type: Gene
SIO_000068: ncbigene

position:487303:-1
position: 487303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:583175:-1
position: 583175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:487303-583175:-1:exon

RAB7A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: RAB7A
product: RAB7A, member RAS oncogene family
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 mRNAs, 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_033087114.1
SIO_010081: RAB7A
subclass of: SO_0000673
so part of: RAB7A
location: complement(join(487303..488774,493810..493938,495510..495728,504870..504996,507191..507251,582951..583175))
location: region:487303-583175:-1
so has part: feature:582951-583175:-1:exon
so has part: feature:507191-507251:-1:exon
so has part: feature:504870-504996:-1:exon
so has part: feature:495510-495728:-1:exon
so has part: feature:493810-493938:-1:exon
so has part: feature:487303-488774:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:582951-583175:-1:exon

position:582951:-1
position: 582951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:507191-507251:-1:exon

position:507191:-1
position: 507191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:507251:-1
position: 507251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:504870-504996:-1:exon

position:504870:-1
position: 504870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:504996:-1
position: 504996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:495510-495728:-1:exon

position:495510:-1
position: 495510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:495728:-1
position: 495728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:493810-493938:-1:exon

position:493810:-1
position: 493810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:493938:-1
position: 493938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:487303-488774:-1:exon

position:488774:-1
position: 488774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RAB7A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: RAB7A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rab-7a
translation: MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEVELYNEFPEPIKLDKNDRAKASAESCSC
SIO_010081: RAB7A
subclass of: SO_0000673
so part of: RAB7A
location: complement(join(488679..488774,493810..493938,495510..495728,504870..504996,507191..507243))
location: region:488679-507243:-1
so has part: feature:507191-507243:-1:exon
so has part: feature:504870-504996:-1:exon
so has part: feature:495510-495728:-1:exon
so has part: feature:493810-493938:-1:exon
so has part: feature:488679-488774:-1:exon

XP_032943005.1
type: Protein
SIO_000068: ncbiprotein

position:488679:-1
position: 488679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:507243:-1
position: 507243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:507191-507243:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:504870-504996:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:495510-495728:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:493810-493938:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:488679-488774:-1:exon

LOC117038646
type: Gene
subclass of: SO_0000704
RO_0002162: 59479
gene: LOC117038646
note: ATP synthase subunit s, mitochondrial-like; Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(495803..501032)
location: region:495803-501032:-1
so has part: feature:495803-501032:-1:exon

117038646
type: Gene
SIO_000068: ncbigene

position:495803:-1
position: 495803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:501032:-1
position: 501032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:495803-501032:-1:exon

LOC117038646
type: Exon
subclass of: SO_0000147
RO_0002162: 59479
gene: LOC117038646
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 64% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117038646
subclass of: SO_0000673
so part of: LOC117038646
location: complement(495803..495810)
location: region:495803-495810:-1
so has part: feature:495803-495810:-1:exon

position:495810:-1
position: 495810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:495803-495810:-1:exon

LOC117038646
type: Exon
subclass of: SO_0000147
RO_0002162: 59479
gene: LOC117038646
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 64% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117038646
subclass of: SO_0000673
so part of: LOC117038646
location: complement(499464..501032)
location: region:499464-501032:-1
so has part: feature:499464-501032:-1:exon

position:499464:-1
position: 499464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:499464-501032:-1:exon

LOC117038662
type: Gene
subclass of: SO_0000704
RO_0002162: 59479
gene: LOC117038662
note: E3 ISG15--protein ligase HERC5-like; Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 596087..601570
location: region:596087-601570:1
so has part: feature:596087-601570:1:exon

117038662
type: Gene
SIO_000068: ncbigene

position:596087:1
position: 596087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:601570:1
position: 601570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:596087-601570:1:exon

LOC117038662
type: Exon
subclass of: SO_0000147
RO_0002162: 59479
gene: LOC117038662
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC117038662
subclass of: SO_0000673
so part of: LOC117038662
location: 596087..596167
location: region:596087-596167:1
so has part: feature:596087-596167:1:exon

position:596167:1
position: 596167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:596087-596167:1:exon

LOC117038662
type: Exon
subclass of: SO_0000147
RO_0002162: 59479
gene: LOC117038662
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC117038662
subclass of: SO_0000673
so part of: LOC117038662
location: 596273..596769
location: region:596273-596769:1
so has part: feature:596273-596769:1:exon

position:596273:1
position: 596273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:596769:1
position: 596769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:596273-596769:1:exon

LOC117038662
type: Exon
subclass of: SO_0000147
RO_0002162: 59479
gene: LOC117038662
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC117038662
subclass of: SO_0000673
so part of: LOC117038662
location: 597221..598169
location: region:597221-598169:1
so has part: feature:597221-598169:1:exon

position:597221:1
position: 597221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:598169:1
position: 598169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:597221-598169:1:exon

LOC117038662
type: Exon
subclass of: SO_0000147
RO_0002162: 59479
gene: LOC117038662
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC117038662
subclass of: SO_0000673
so part of: LOC117038662
location: 598390..599288
location: region:598390-599288:1
so has part: feature:598390-599288:1:exon

position:598390:1
position: 598390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:599288:1
position: 599288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:598390-599288:1:exon

LOC117038662
type: Exon
subclass of: SO_0000147
RO_0002162: 59479
gene: LOC117038662
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC117038662
subclass of: SO_0000673
so part of: LOC117038662
location: 601383..601570
location: region:601383-601570:1
so has part: feature:601383-601570:1:exon

position:601383:1
position: 601383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:601383-601570:1:exon

LOC117038663
type: Gene
subclass of: SO_0000704
RO_0002162: 59479
gene: LOC117038663
note: 26S proteasome regulatory subunit 4-like; Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(628074..637060)
location: region:628074-637060:-1
so has part: feature:628074-637060:-1:exon

117038663
type: Gene
SIO_000068: ncbigene

position:628074:-1
position: 628074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:637060:-1
position: 637060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:628074-637060:-1:exon

LOC117038663
type: Exon
subclass of: SO_0000147
RO_0002162: 59479
gene: LOC117038663
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 20% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117038663
subclass of: SO_0000673
so part of: LOC117038663
location: complement(628074..628513)
location: region:628074-628513:-1
so has part: feature:628074-628513:-1:exon

position:628513:-1
position: 628513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:628074-628513:-1:exon

LOC117038663
type: Exon
subclass of: SO_0000147
RO_0002162: 59479
gene: LOC117038663
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 20% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117038663
subclass of: SO_0000673
so part of: LOC117038663
location: complement(628700..629139)
location: region:628700-629139:-1
so has part: feature:628700-629139:-1:exon

position:628700:-1
position: 628700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:629139:-1
position: 629139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:628700-629139:-1:exon

LOC117038663
type: Exon
subclass of: SO_0000147
RO_0002162: 59479
gene: LOC117038663
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 20% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117038663
subclass of: SO_0000673
so part of: LOC117038663
location: complement(637031..637060)
location: region:637031-637060:-1
so has part: feature:637031-637060:-1:exon

position:637031:-1
position: 637031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:637031-637060:-1:exon

LOC117011647
type: Gene
subclass of: SO_0000704
RO_0002162: 59479
gene: LOC117011647
note: uncharacterized LOC117011647; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 639518..649870
location: region:639518-649870:1
so has part: feature:639518-649870:1:exon
subclass of: SO_0000011

117011647
type: Gene
SIO_000068: ncbigene

position:639518:1
position: 639518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:649870:1
position: 649870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:639518-649870:1:exon

LOC117011647
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59479
nc RNA class: lncRNA
gene: LOC117011647
product: uncharacterized LOC117011647, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004421046.1
SIO_010081: LOC117011647
subclass of: SO_0000673
so part of: LOC117011647
location: join(639518..639696,646626..646713,648203..648986)
location: region:639518-648986:1
so has part: feature:639518-639696:1:exon
so has part: feature:646626-646713:1:exon
so has part: feature:648203-648986:1:exon

position:648986:1
position: 648986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:639518-639696:1:exon

position:639696:1
position: 639696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:646626-646713:1:exon

position:646626:1
position: 646626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:646713:1
position: 646713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:648203-648986:1:exon

position:648203:1
position: 648203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117011647
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59479
nc RNA class: lncRNA
gene: LOC117011647
product: uncharacterized LOC117011647, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XR_004421047.1
SIO_010081: LOC117011647
subclass of: SO_0000673
so part of: LOC117011647
location: join(639704..639980,646626..646713,648203..648311,649465..649870)
location: region:639704-649870:1
so has part: feature:639704-639980:1:exon
so has part: feature:646626-646713:1:exon
so has part: feature:648203-648311:1:exon
so has part: feature:649465-649870:1:exon

position:639704:1
position: 639704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:639704-639980:1:exon

position:639980:1
position: 639980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:646626-646713:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:648203-648311:1:exon

position:648311:1
position: 648311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:649465-649870:1:exon

position:649465:1
position: 649465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117011647
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59479
nc RNA class: lncRNA
gene: LOC117011647
product: uncharacterized LOC117011647, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XR_004421044.1
SIO_010081: LOC117011647
subclass of: SO_0000673
so part of: LOC117011647
location: join(639704..639980,641233..641304,646626..646713,648203..648986)
location: region:639704-648986:1
so has part: feature:639704-639980:1:exon
so has part: feature:641233-641304:1:exon
so has part: feature:646626-646713:1:exon
so has part: feature:648203-648986:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:639704-639980:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:641233-641304:1:exon

position:641233:1
position: 641233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:641304:1
position: 641304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:646626-646713:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:648203-648986:1:exon

LOC117011647
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59479
nc RNA class: lncRNA
gene: LOC117011647
product: uncharacterized LOC117011647, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XR_004421043.1
SIO_010081: LOC117011647
subclass of: SO_0000673
so part of: LOC117011647
location: join(639704..639980,646626..646713,648203..648986)
location: region:639704-648986:1
so has part: feature:639704-639980:1:exon
so has part: feature:646626-646713:1:exon
so has part: feature:648203-648986:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:639704-639980:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:646626-646713:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:648203-648986:1:exon

LOC117011647
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59479
nc RNA class: lncRNA
gene: LOC117011647
product: uncharacterized LOC117011647, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004421045.1
SIO_010081: LOC117011647
subclass of: SO_0000673
so part of: LOC117011647
location: join(646379..646521,646626..646713,648203..648986)
location: region:646379-648986:1
so has part: feature:646379-646521:1:exon
so has part: feature:646626-646713:1:exon
so has part: feature:648203-648986:1:exon

position:646379:1
position: 646379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:646379-646521:1:exon

position:646521:1
position: 646521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:646626-646713:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:648203-648986:1:exon

LOC117012024
type: Gene
subclass of: SO_0000704
RO_0002162: 59479
gene: LOC117012024
note: small nucleolar RNA SNORD38; Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 654612..654674
location: region:654612-654674:1
so has part: feature:654612-654674:1:exon
subclass of: SO_0000578

117012024
type: Gene
SIO_000068: ncbigene

position:654612:1
position: 654612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:654674:1
position: 654674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:654612-654674:1:exon

LOC117012024
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59479
nc RNA class: snoRNA
gene: LOC117012024
product: small nucleolar RNA SNORD38
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00212
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004421101.1
SIO_010081: LOC117012024
subclass of: SO_0000673
so part of: LOC117012024
location: 654612..654674
location: region:654612-654674:1
so has part: feature:654612-654674:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:654612-654674:1:exon

RPN1
type: Gene
subclass of: SO_0000704
RO_0002162: 59479
gene: RPN1
note: ribophorin I; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 658552..685191
location: region:658552-685191:1
so has part: feature:658552-685191:1:exon
subclass of: SO_0000010

117011770
type: Gene
SIO_000068: ncbigene

position:658552:1
position: 658552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:685191:1
position: 685191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:658552-685191:1:exon

RPN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: RPN1
product: ribophorin I, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_033087453.1
SIO_010081: RPN1
subclass of: SO_0000673
so part of: RPN1
location: join(658552..658899,661811..661875,665578..665884,672220..672429,673429..673621,678599..678698,679933..680071,680309..680428,682959..683285,684568..685191)
location: region:658552-685191:1
so has part: feature:658552-658899:1:exon
so has part: feature:661811-661875:1:exon
so has part: feature:665578-665884:1:exon
so has part: feature:672220-672429:1:exon
so has part: feature:673429-673621:1:exon
so has part: feature:678599-678698:1:exon
so has part: feature:679933-680071:1:exon
so has part: feature:680309-680428:1:exon
so has part: feature:682959-683285:1:exon
so has part: feature:684568-685191:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:658552-658899:1:exon

position:658899:1
position: 658899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:661811-661875:1:exon

position:661811:1
position: 661811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:661875:1
position: 661875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:665578-665884:1:exon

position:665578:1
position: 665578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:665884:1
position: 665884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:672220-672429:1:exon

position:672220:1
position: 672220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:672429:1
position: 672429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:673429-673621:1:exon

position:673429:1
position: 673429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:673621:1
position: 673621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:678599-678698:1:exon

position:678599:1
position: 678599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:678698:1
position: 678698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:679933-680071:1:exon

position:679933:1
position: 679933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:680071:1
position: 680071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:680309-680428:1:exon

position:680309:1
position: 680309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:680428:1
position: 680428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:682959-683285:1:exon

position:682959:1
position: 682959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:683285:1
position: 683285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:684568-685191:1:exon

position:684568:1
position: 684568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RPN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: RPN1
product: ribophorin I, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 mRNAs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_033087454.1
SIO_010081: RPN1
subclass of: SO_0000673
so part of: RPN1
location: join(658637..658899,661811..661875,665578..665884,672220..672429,673429..673621,678599..678698,679933..680071,680309..680428,683040..683285,684568..685177)
location: region:658637-685177:1
so has part: feature:658637-658899:1:exon
so has part: feature:661811-661875:1:exon
so has part: feature:665578-665884:1:exon
so has part: feature:672220-672429:1:exon
so has part: feature:673429-673621:1:exon
so has part: feature:678599-678698:1:exon
so has part: feature:679933-680071:1:exon
so has part: feature:680309-680428:1:exon
so has part: feature:683040-683285:1:exon
so has part: feature:684568-685177:1:exon

position:658637:1
position: 658637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:685177:1
position: 685177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:658637-658899:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:661811-661875:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:665578-665884:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:672220-672429:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:673429-673621:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:678599-678698:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:679933-680071:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:680309-680428:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:683040-683285:1:exon

position:683040:1
position: 683040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:684568-685177:1:exon

RPN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: RPN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 isoform X1
translation: MEVPAIRLLLLLLFWVWAPAPSSASPEAPPLVNEDVKRTVDLSSHLAKVTAEVVLAHPGGGSTSRASSFLLALEPELEARLAYLGVQVKGEDEEENNLEVQETKIKGKSGKFFIVKLPVALDPGTKISVIVETVYTHVLQPYPTQITQSEKQFVVFEGNHYFYSPYPTKTQMMRVKLASRNVESYTKLGNPTRSEDLLDYGPFRDIPAYSQDTFKVHYENNSPFLTITSMTRVIEVSHWGNIAVEENVDLKHTGAVLKGPFSRYDYQRQPDSGISSIRSFKTILPAAAQDVYYRDEIGNVSTSHLLILDDSVEMEIRPRFPLFGGWKTHYIVGYNLPSYEYLYNLGDQYALKMRFVDHVFDEQVIDSLTVKIILPEGAKNIQVDSPYEISRAPDELHYTYLDTFGRPVIVAYKKNLVEQHIQDIVVHYTFNKVLMLQEPLLVVAAFYILFFTVIIYVRLDFSITKLVADAVWEVKVGVGSCLVSSHTVSLLQDPAAEAKMKVACITEQVLTLVNKRIGLYRLFDETVNRYKQSRDVSTLNSGKKSLETEHKALTSEIALLQSRLKTEGSDLCDKVSEMQKLDAQVKELVLKSAVEAERLVAGKLKKDTYIENEKLISGKRQELVTKIDHILDAL
SIO_010081: RPN1
subclass of: SO_0000673
so part of: RPN1
location: join(658639..658899,661811..661875,665578..665884,672220..672429,673429..673621,678599..678698,679933..680071,680309..680428,682959..683285,684568..684750)
location: region:658639-684750:1
so has part: feature:658639-658899:1:exon
so has part: feature:661811-661875:1:exon
so has part: feature:665578-665884:1:exon
so has part: feature:672220-672429:1:exon
so has part: feature:673429-673621:1:exon
so has part: feature:678599-678698:1:exon
so has part: feature:679933-680071:1:exon
so has part: feature:680309-680428:1:exon
so has part: feature:682959-683285:1:exon
so has part: feature:684568-684750:1:exon

XP_032943344.1
type: Protein
SIO_000068: ncbiprotein

position:658639:1
position: 658639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:684750:1
position: 684750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:658639-658899:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:661811-661875:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:665578-665884:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:672220-672429:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:673429-673621:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:678599-678698:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:679933-680071:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:680309-680428:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:682959-683285:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:684568-684750:1:exon

RPN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: RPN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 isoform X2
translation: MEVPAIRLLLLLLFWVWAPAPSSASPEAPPLVNEDVKRTVDLSSHLAKVTAEVVLAHPGGGSTSRASSFLLALEPELEARLAYLGVQVKGEDEEENNLEVQETKIKGKSGKFFIVKLPVALDPGTKISVIVETVYTHVLQPYPTQITQSEKQFVVFEGNHYFYSPYPTKTQMMRVKLASRNVESYTKLGNPTRSEDLLDYGPFRDIPAYSQDTFKVHYENNSPFLTITSMTRVIEVSHWGNIAVEENVDLKHTGAVLKGPFSRYDYQRQPDSGISSIRSFKTILPAAAQDVYYRDEIGNVSTSHLLILDDSVEMEIRPRFPLFGGWKTHYIVGYNLPSYEYLYNLGDQYALKMRFVDHVFDEQVIDSLTVKIILPEGAKNIQVDSPYEISRAPDELHYTYLDTFGRPVIVAYKKNLVEQHIQDIVVHYTFNKVLMLQEPLLVVAAFYILFFTVIIYVRLDFSITKDPAAEAKMKVACITEQVLTLVNKRIGLYRLFDETVNRYKQSRDVSTLNSGKKSLETEHKALTSEIALLQSRLKTEGSDLCDKVSEMQKLDAQVKELVLKSAVEAERLVAGKLKKDTYIENEKLISGKRQELVTKIDHILDAL
SIO_010081: RPN1
subclass of: SO_0000673
so part of: RPN1
location: join(658639..658899,661811..661875,665578..665884,672220..672429,673429..673621,678599..678698,679933..680071,680309..680428,683040..683285,684568..684750)
location: region:658639-684750:1
so has part: feature:658639-658899:1:exon
so has part: feature:661811-661875:1:exon
so has part: feature:665578-665884:1:exon
so has part: feature:672220-672429:1:exon
so has part: feature:673429-673621:1:exon
so has part: feature:678599-678698:1:exon
so has part: feature:679933-680071:1:exon
so has part: feature:680309-680428:1:exon
so has part: feature:683040-683285:1:exon
so has part: feature:684568-684750:1:exon

XP_032943345.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:658639-658899:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:661811-661875:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:665578-665884:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:672220-672429:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:673429-673621:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:678599-678698:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:679933-680071:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:680309-680428:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:683040-683285:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:684568-684750:1:exon

LOC117011771
type: Gene
subclass of: SO_0000704
RO_0002162: 59479
gene: LOC117011771
note: 40S ribosomal protein S6-like; Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 671332..672060
location: region:671332-672060:1
so has part: feature:671332-672060:1:exon

117011771
type: Gene
SIO_000068: ncbigene

position:671332:1
position: 671332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:672060:1
position: 672060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:671332-672060:1:exon

LOC117011771
type: Exon
subclass of: SO_0000147
RO_0002162: 59479
gene: LOC117011771
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 37% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117011771
subclass of: SO_0000673
so part of: LOC117011771
location: 671332..672060
location: region:671332-672060:1
so has part: feature:671332-672060:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:671332-672060:1:exon

LOC117012003
type: Gene
subclass of: SO_0000704
RO_0002162: 59479
gene: LOC117012003
note: U6 spliceosomal RNA; Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 723763..723866
location: region:723763-723866:1
so has part: feature:723763-723866:1:exon
subclass of: SO_0000623

117012003
type: Gene
SIO_000068: ncbigene

position:723763:1
position: 723763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:723866:1
position: 723866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:723763-723866:1:exon

LOC117012003
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59479
nc RNA class: snRNA
gene: LOC117012003
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004421085.1
SIO_010081: LOC117012003
subclass of: SO_0000673
so part of: LOC117012003
location: 723763..723866
location: region:723763-723866:1
so has part: feature:723763-723866:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:723763-723866:1:exon

GATA2
type: Gene
subclass of: SO_0000704
RO_0002162: 59479
gene: GATA2
note: GATA binding protein 2; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 833980..846773
location: region:833980-846773:1
so has part: feature:833980-846773:1:exon
subclass of: SO_0000010

117011736
type: Gene
SIO_000068: ncbigene

position:833980:1
position: 833980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:846773:1
position: 846773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:833980-846773:1:exon

GATA2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: GATA2
product: GATA binding protein 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_033087365.1
SIO_010081: GATA2
subclass of: SO_0000673
so part of: GATA2
location: join(833980..834383,838291..838498,839110..839383,839793..840434,842138..842283,844266..844391,844865..846773)
location: region:833980-846773:1
so has part: feature:833980-834383:1:exon
so has part: feature:838291-838498:1:exon
so has part: feature:839110-839383:1:exon
so has part: feature:839793-840434:1:exon
so has part: feature:842138-842283:1:exon
so has part: feature:844266-844391:1:exon
so has part: feature:844865-846773:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:833980-834383:1:exon

position:834383:1
position: 834383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:838291-838498:1:exon

position:838291:1
position: 838291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:838498:1
position: 838498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:839110-839383:1:exon

position:839110:1
position: 839110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:839383:1
position: 839383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:839793-840434:1:exon

position:839793:1
position: 839793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:840434:1
position: 840434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:842138-842283:1:exon

position:842138:1
position: 842138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:842283:1
position: 842283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:844266-844391:1:exon

position:844266:1
position: 844266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:844391:1
position: 844391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:844865-846773:1:exon

position:844865:1
position: 844865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GATA2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: GATA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: endothelial transcription factor GATA-2 isoform X1
translation: MWVRIWSRELAPRLREDAEGPEPGGPEAEACAVPRSHPLSHASRLTRSSLDPPPLVFRGCFPSPRLRPSPGGAACNHRSLRPELEPPPPAMEVAPEQPRWMAHPAVLNTQHPDSHHPGLAHNYMEPAQLLPPDEVDVFFNHLDSQGNPYYTNSAHARARVSYSPAHARLTGGQMCRPHLLHSPGLPWLDGGKAALSAAAAHHHNPWTVSPFSKTPLHPSAAGGPGGPLSVYPGAAGGSGGGSGGAVTSLTPTAAHTGSHLFGFPPTPPKEVSPDPSTTGAASPASSSAGGSTARGEDKDGIKYQVSLAESMKMESGSPLRPGLAAVGTQPATHHPIPTYPSYVPAAAHDYSTGLFHPGGFLGGPASSFTPKQRSKARSCSEGRECVNCGATATPLWRRDGTGHYLCNACGLYHKMNGQNRPLIKPKRRLSAARRAGTCCANCQTTTTTLWRRNANGDPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKMSNKSKKNKKGVECFEELSKCMQEKASPFSAAALAGHMAPVGHIPPFSHSGHILPTPTPIHPSSSLSFGHPHPSSMVTAMG
SIO_010081: GATA2
subclass of: SO_0000673
so part of: GATA2
location: join(834367..834383,838291..838498,839110..839383,839793..840434,842138..842283,844266..844391,844865..845164)
location: region:834367-845164:1
so has part: feature:834367-834383:1:exon
so has part: feature:838291-838498:1:exon
so has part: feature:839110-839383:1:exon
so has part: feature:839793-840434:1:exon
so has part: feature:842138-842283:1:exon
so has part: feature:844266-844391:1:exon
so has part: feature:844865-845164:1:exon

XP_032943256.1
type: Protein
SIO_000068: ncbiprotein

position:834367:1
position: 834367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:845164:1
position: 845164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:834367-834383:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:838291-838498:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:839110-839383:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:839793-840434:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:842138-842283:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:844266-844391:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:844865-845164:1:exon

GATA2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: GATA2
product: GATA binding protein 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_033087366.1
SIO_010081: GATA2
subclass of: SO_0000673
so part of: GATA2
location: join(836353..836448,838291..838498,839110..839383,839793..840434,842138..842283,844266..844391,844865..846773)
location: region:836353-846773:1
so has part: feature:836353-836448:1:exon
so has part: feature:838291-838498:1:exon
so has part: feature:839110-839383:1:exon
so has part: feature:839793-840434:1:exon
so has part: feature:842138-842283:1:exon
so has part: feature:844266-844391:1:exon
so has part: feature:844865-846773:1:exon

position:836353:1
position: 836353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:836353-836448:1:exon

position:836448:1
position: 836448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:838291-838498:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:839110-839383:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:839793-840434:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:842138-842283:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:844266-844391:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:844865-846773:1:exon

GATA2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: GATA2
product: GATA binding protein 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_033087367.1
SIO_010081: GATA2
subclass of: SO_0000673
so part of: GATA2
location: join(838293..838498,838970..839383,839793..840434,842138..842283,844266..844391,844865..846773)
location: region:838293-846773:1
so has part: feature:838293-838498:1:exon
so has part: feature:838970-839383:1:exon
so has part: feature:839793-840434:1:exon
so has part: feature:842138-842283:1:exon
so has part: feature:844266-844391:1:exon
so has part: feature:844865-846773:1:exon

position:838293:1
position: 838293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:838293-838498:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:838970-839383:1:exon

position:838970:1
position: 838970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:839793-840434:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:842138-842283:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:844266-844391:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:844865-846773:1:exon

GATA2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: GATA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: endothelial transcription factor GATA-2 isoform X2
translation: MEVAPEQPRWMAHPAVLNTQHPDSHHPGLAHNYMEPAQLLPPDEVDVFFNHLDSQGNPYYTNSAHARARVSYSPAHARLTGGQMCRPHLLHSPGLPWLDGGKAALSAAAAHHHNPWTVSPFSKTPLHPSAAGGPGGPLSVYPGAAGGSGGGSGGAVTSLTPTAAHTGSHLFGFPPTPPKEVSPDPSTTGAASPASSSAGGSTARGEDKDGIKYQVSLAESMKMESGSPLRPGLAAVGTQPATHHPIPTYPSYVPAAAHDYSTGLFHPGGFLGGPASSFTPKQRSKARSCSEGRECVNCGATATPLWRRDGTGHYLCNACGLYHKMNGQNRPLIKPKRRLSAARRAGTCCANCQTTTTTLWRRNANGDPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKMSNKSKKNKKGVECFEELSKCMQEKASPFSAAALAGHMAPVGHIPPFSHSGHILPTPTPIHPSSSLSFGHPHPSSMVTAMG
SIO_010081: GATA2
subclass of: SO_0000673
so part of: GATA2
location: join(839155..839383,839793..840434,842138..842283,844266..844391,844865..845164)
location: region:839155-845164:1
so has part: feature:839155-839383:1:exon
so has part: feature:839793-840434:1:exon
so has part: feature:842138-842283:1:exon
so has part: feature:844266-844391:1:exon
so has part: feature:844865-845164:1:exon

XP_032943257.1
type: Protein
SIO_000068: ncbiprotein

position:839155:1
position: 839155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:839155-839383:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:839793-840434:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:842138-842283:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:844266-844391:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:844865-845164:1:exon

GATA2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: GATA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: endothelial transcription factor GATA-2 isoform X2
translation: MEVAPEQPRWMAHPAVLNTQHPDSHHPGLAHNYMEPAQLLPPDEVDVFFNHLDSQGNPYYTNSAHARARVSYSPAHARLTGGQMCRPHLLHSPGLPWLDGGKAALSAAAAHHHNPWTVSPFSKTPLHPSAAGGPGGPLSVYPGAAGGSGGGSGGAVTSLTPTAAHTGSHLFGFPPTPPKEVSPDPSTTGAASPASSSAGGSTARGEDKDGIKYQVSLAESMKMESGSPLRPGLAAVGTQPATHHPIPTYPSYVPAAAHDYSTGLFHPGGFLGGPASSFTPKQRSKARSCSEGRECVNCGATATPLWRRDGTGHYLCNACGLYHKMNGQNRPLIKPKRRLSAARRAGTCCANCQTTTTTLWRRNANGDPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKMSNKSKKNKKGVECFEELSKCMQEKASPFSAAALAGHMAPVGHIPPFSHSGHILPTPTPIHPSSSLSFGHPHPSSMVTAMG
SIO_010081: GATA2
subclass of: SO_0000673
so part of: GATA2
location: join(839155..839383,839793..840434,842138..842283,844266..844391,844865..845164)
location: region:839155-845164:1
so has part: feature:839155-839383:1:exon
so has part: feature:839793-840434:1:exon
so has part: feature:842138-842283:1:exon
so has part: feature:844266-844391:1:exon
so has part: feature:844865-845164:1:exon

XP_032943258.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:839155-839383:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:839793-840434:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:842138-842283:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:844266-844391:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:844865-845164:1:exon

DNAJB8
type: Gene
subclass of: SO_0000704
RO_0002162: 59479
gene: DNAJB8
note: DnaJ heat shock protein family (Hsp40) member B8; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 865272..865997
location: region:865272-865997:1
so has part: feature:865272-865997:1:exon
subclass of: SO_0000010

117011959
type: Gene
SIO_000068: ncbigene

position:865272:1
position: 865272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:865997:1
position: 865997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:865272-865997:1:exon

DNAJB8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: DNAJB8
product: DnaJ heat shock protein family (Hsp40) member B8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 8 Proteins
transcript id: XM_033087810.1
SIO_010081: DNAJB8
subclass of: SO_0000673
so part of: DNAJB8
location: 865272..865997
location: region:865272-865997:1
so has part: feature:865272-865997:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:865272-865997:1:exon

DNAJB8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: DNAJB8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dnaJ homolog subfamily B member 8
translation: MANYYKVLGVQSSASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKQVSEAYEVLSNSKKRSVYDRAGCDSWRAGGGASTPHNSPFDTGYTFRNPEDIFREFFGGLDPFSFDFWDTPFNNDRAGWGHGLRGTFPTGFGEFPAFMEAFSAFDTLGRGGGASRATFSSTSFGGSGSGSSGFKSVMSSTELINGHKITTKRIVENGQERMEVEEDGQLKSVTISGKEQLKRMDNK
SIO_010081: DNAJB8
subclass of: SO_0000673
so part of: DNAJB8
location: 865273..865974
location: region:865273-865974:1
so has part: feature:865273-865974:1:exon

XP_032943701.1
type: Protein
SIO_000068: ncbiprotein

position:865273:1
position: 865273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:865974:1
position: 865974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:865273-865974:1:exon

LOC117012011
type: Gene
subclass of: SO_0000704
RO_0002162: 59479
gene: LOC117012011
note: uncharacterized LOC117012011; Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: 883981..884076
location: region:883981-884076:1
so has part: feature:883981-884076:1:exon

117012011
type: Gene
SIO_000068: ncbigene

position:883981:1
position: 883981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:884076:1
position: 884076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:883981-884076:1:exon

LOC117012011
type: Exon
subclass of: SO_0000147
RO_0002162: 59479
gene: LOC117012011
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC117012011
subclass of: SO_0000673
so part of: LOC117012011
location: 883981..884076
location: region:883981-884076:1
so has part: feature:883981-884076:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:883981-884076:1:exon

EEFSEC
type: Gene
subclass of: SO_0000704
RO_0002162: 59479
gene: EEFSEC
note: eukaryotic elongation factor, selenocysteine-tRNA specific; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(915034..1201060)
location: region:915034-1201060:-1
so has part: feature:915034-1201060:-1:exon
subclass of: SO_0000010

117011699
type: Gene
SIO_000068: ncbigene

position:915034:-1
position: 915034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1201060:-1
position: 1201060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:915034-1201060:-1:exon

EEFSEC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: EEFSEC
product: eukaryotic elongation factor, selenocysteine-tRNA specific, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_033087205.1
SIO_010081: EEFSEC
subclass of: SO_0000673
so part of: EEFSEC
location: complement(join(915034..916806,964128..964284,985942..986598,1064502..1064598,1094890..1095097,1200688..1201060))
location: region:915034-1201060:-1
so has part: feature:1200688-1201060:-1:exon
so has part: feature:1094890-1095097:-1:exon
so has part: feature:1064502-1064598:-1:exon
so has part: feature:985942-986598:-1:exon
so has part: feature:964128-964284:-1:exon
so has part: feature:915034-916806:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1200688-1201060:-1:exon

position:1200688:-1
position: 1200688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1094890-1095097:-1:exon

position:1094890:-1
position: 1094890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1095097:-1
position: 1095097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1064502-1064598:-1:exon

position:1064502:-1
position: 1064502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1064598:-1
position: 1064598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:985942-986598:-1:exon

position:985942:-1
position: 985942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:986598:-1
position: 986598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:964128-964284:-1:exon

position:964128:-1
position: 964128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:964284:-1
position: 964284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:915034-916806:-1:exon

position:916806:-1
position: 916806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

EEFSEC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: EEFSEC
product: eukaryotic elongation factor, selenocysteine-tRNA specific, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_033087202.1
SIO_010081: EEFSEC
subclass of: SO_0000673
so part of: EEFSEC
location: complement(join(915034..916806,964128..964284,985942..986598,1061915..1062079,1064502..1064598,1094890..1095097,1200688..1201060))
location: region:915034-1201060:-1
so has part: feature:1200688-1201060:-1:exon
so has part: feature:1094890-1095097:-1:exon
so has part: feature:1064502-1064598:-1:exon
so has part: feature:1061915-1062079:-1:exon
so has part: feature:985942-986598:-1:exon
so has part: feature:964128-964284:-1:exon
so has part: feature:915034-916806:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1200688-1201060:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1094890-1095097:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1064502-1064598:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1061915-1062079:-1:exon

position:1061915:-1
position: 1061915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1062079:-1
position: 1062079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:985942-986598:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:964128-964284:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:915034-916806:-1:exon

EEFSEC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: EEFSEC
product: eukaryotic elongation factor, selenocysteine-tRNA specific, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033087206.1
SIO_010081: EEFSEC
subclass of: SO_0000673
so part of: EEFSEC
location: complement(join(915034..916806,964128..964284,985942..986598,1061915..1062079,1064502..1064598,1094890..1095097,1118542..1118589))
location: region:915034-1118589:-1
so has part: feature:1118542-1118589:-1:exon
so has part: feature:1094890-1095097:-1:exon
so has part: feature:1064502-1064598:-1:exon
so has part: feature:1061915-1062079:-1:exon
so has part: feature:985942-986598:-1:exon
so has part: feature:964128-964284:-1:exon
so has part: feature:915034-916806:-1:exon

position:1118589:-1
position: 1118589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1118542-1118589:-1:exon

position:1118542:-1
position: 1118542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1094890-1095097:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1064502-1064598:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1061915-1062079:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:985942-986598:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:964128-964284:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:915034-916806:-1:exon

EEFSEC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: EEFSEC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: selenocysteine-specific elongation factor isoform X3
translation: MAGQRVNVNVGVLGHIDSGKTALARALSTTASTAAFDKQPQSRERGITLDLGFSCFSVPLPARLRSALPAPHLAPDAGPEPREPQLQFTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLVIGQIACQKLVVVLNKIDLLAEGKRQAAIDKMTKKMQKTLESTKFRGAPIIPVAAKPGGPEAPETEAPQGISELIEVVKKVKSMQMFHMPVTTAMQGDRLGICVTQFDPKLLERGLVCAPESLHIIHAALISVEKIPYFRGPLQTKAKFHITVGHETVMGRLMFFSPAPDSFDHEPVLDAFDFSREYLFQEQYLCKDLAPAATDSGQTNEKAGQAPDGHCPRQQWALVEFEKPVTCPQLCLVIGSRLDADIHANMCRLAFHGVLLHGLQDKNYAESLLPRLRVYKLKHKHGLVERVIDDYNVIGRSLFKKETNIQLFVGLKVYLSTGELGVIDSAFGQSGKFKVHIPGGLSPESKKILMPSLKKRSRAGQGEVAERKEGVEQPEPAHHVTLSLSFKRYVFDTHKRMVQSP
SIO_010081: EEFSEC
subclass of: SO_0000673
so part of: EEFSEC
location: complement(join(916616..916806,964128..964284,985942..986598,1064502..1064598,1094890..1095097,1200688..1201003))
location: region:916616-1201003:-1
so has part: feature:1200688-1201003:-1:exon
so has part: feature:1094890-1095097:-1:exon
so has part: feature:1064502-1064598:-1:exon
so has part: feature:985942-986598:-1:exon
so has part: feature:964128-964284:-1:exon
so has part: feature:916616-916806:-1:exon

XP_032943096.1
type: Protein
SIO_000068: ncbiprotein

position:916616:-1
position: 916616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1201003:-1
position: 1201003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1200688-1201003:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1094890-1095097:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1064502-1064598:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:985942-986598:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:964128-964284:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:916616-916806:-1:exon

EEFSEC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: EEFSEC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: selenocysteine-specific elongation factor isoform X1
translation: MAGQRVNVNVGVLGHIDSGKTALARALSTTASTAAFDKQPQSRERGITLDLGFSCFSVPLPARLRSALPAPHLAPDAGPEPREPQLQFTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLVIGQIACQKLVVVLNKIDLLAEGKRQAAIDKMTKKMQKTLESTKFRGAPIIPVAAKPGGPEAPETEAPQGISELIELLTFQISIPTRDPSGSFLMSVDHCFSIKGQGTVMTGTILSGSISLGDSVEIPALKVVKKVKSMQMFHMPVTTAMQGDRLGICVTQFDPKLLERGLVCAPESLHIIHAALISVEKIPYFRGPLQTKAKFHITVGHETVMGRLMFFSPAPDSFDHEPVLDAFDFSREYLFQEQYLCKDLAPAATDSGQTNEKAGQAPDGHCPRQQWALVEFEKPVTCPQLCLVIGSRLDADIHANMCRLAFHGVLLHGLQDKNYAESLLPRLRVYKLKHKHGLVERVIDDYNVIGRSLFKKETNIQLFVGLKVYLSTGELGVIDSAFGQSGKFKVHIPGGLSPESKKILMPSLKKRSRAGQGEVAERKEGVEQPEPAHHVTLSLSFKRYVFDTHKRMVQSP
SIO_010081: EEFSEC
subclass of: SO_0000673
so part of: EEFSEC
location: complement(join(916616..916806,964128..964284,985942..986598,1061915..1062079,1064502..1064598,1094890..1095097,1200688..1201003))
location: region:916616-1201003:-1
so has part: feature:1200688-1201003:-1:exon
so has part: feature:1094890-1095097:-1:exon
so has part: feature:1064502-1064598:-1:exon
so has part: feature:1061915-1062079:-1:exon
so has part: feature:985942-986598:-1:exon
so has part: feature:964128-964284:-1:exon
so has part: feature:916616-916806:-1:exon

XP_032943093.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1200688-1201003:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1094890-1095097:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1064502-1064598:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1061915-1062079:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:985942-986598:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:964128-964284:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:916616-916806:-1:exon

EEFSEC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: EEFSEC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: selenocysteine-specific elongation factor isoform X4
translation: MKNTTAGAQIIDLMMLVIDVTKGMQTQSAECLVIGQIACQKLVVVLNKIDLLAEGKRQAAIDKMTKKMQKTLESTKFRGAPIIPVAAKPGGPEAPETEAPQGISELIELLTFQISIPTRDPSGSFLMSVDHCFSIKGQGTVMTGTILSGSISLGDSVEIPALKVVKKVKSMQMFHMPVTTAMQGDRLGICVTQFDPKLLERGLVCAPESLHIIHAALISVEKIPYFRGPLQTKAKFHITVGHETVMGRLMFFSPAPDSFDHEPVLDAFDFSREYLFQEQYLCKDLAPAATDSGQTNEKAGQAPDGHCPRQQWALVEFEKPVTCPQLCLVIGSRLDADIHANMCRLAFHGVLLHGLQDKNYAESLLPRLRVYKLKHKHGLVERVIDDYNVIGRSLFKKETNIQLFVGLKVYLSTGELGVIDSAFGQSGKFKVHIPGGLSPESKKILMPSLKKRSRAGQGEVAERKEGVEQPEPAHHVTLSLSFKRYVFDTHKRMVQSP
SIO_010081: EEFSEC
subclass of: SO_0000673
so part of: EEFSEC
location: complement(join(916616..916806,964128..964284,985942..986598,1061915..1062079,1064502..1064598,1094890..1095097,1118542..1118560))
location: region:916616-1118560:-1
so has part: feature:1118542-1118560:-1:exon
so has part: feature:1094890-1095097:-1:exon
so has part: feature:1064502-1064598:-1:exon
so has part: feature:1061915-1062079:-1:exon
so has part: feature:985942-986598:-1:exon
so has part: feature:964128-964284:-1:exon
so has part: feature:916616-916806:-1:exon

XP_032943097.1
type: Protein
SIO_000068: ncbiprotein

position:1118560:-1
position: 1118560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1118542-1118560:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1094890-1095097:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1064502-1064598:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1061915-1062079:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:985942-986598:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:964128-964284:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:916616-916806:-1:exon

EEFSEC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: EEFSEC
product: eukaryotic elongation factor, selenocysteine-tRNA specific, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_033087203.1
SIO_010081: EEFSEC
subclass of: SO_0000673
so part of: EEFSEC
location: complement(join(916705..916806,948530..948643,964128..964284,985942..986598,1061915..1062079,1064502..1064598,1094890..1095097,1200688..1201060))
location: region:916705-1201060:-1
so has part: feature:1200688-1201060:-1:exon
so has part: feature:1094890-1095097:-1:exon
so has part: feature:1064502-1064598:-1:exon
so has part: feature:1061915-1062079:-1:exon
so has part: feature:985942-986598:-1:exon
so has part: feature:964128-964284:-1:exon
so has part: feature:948530-948643:-1:exon
so has part: feature:916705-916806:-1:exon

position:916705:-1
position: 916705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1200688-1201060:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1094890-1095097:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1064502-1064598:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1061915-1062079:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:985942-986598:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:964128-964284:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:948530-948643:-1:exon

position:948530:-1
position: 948530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:948643:-1
position: 948643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:916705-916806:-1:exon

EEFSEC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: EEFSEC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: selenocysteine-specific elongation factor isoform X2
translation: MAGQRVNVNVGVLGHIDSGKTALARALSTTASTAAFDKQPQSRERGITLDLGFSCFSVPLPARLRSALPAPHLAPDAGPEPREPQLQFTLVDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLVIGQIACQKLVVVLNKIDLLAEGKRQAAIDKMTKKMQKTLESTKFRGAPIIPVAAKPGGPEAPETEAPQGISELIELLTFQISIPTRDPSGSFLMSVDHCFSIKGQGTVMTGTILSGSISLGDSVEIPALKVVKKVKSMQMFHMPVTTAMQGDRLGICVTQFDPKLLERGLVCAPESLHIIHAALISVEKIPYFRGPLQTKAKFHITVGHETVMGRLMFFSPAPDSFDHEPVLDAFDFSREYLFQEQYLCKDLAPAATDSGQTNEKAGQAPDGHCPRQQWALVEFEKPVTCPQLCLVIGSRLDADIHANMCRLAFHGVLLHGLQDKNYAESLLPRLRVYKLKHKHGLVERVIDDYNVIGRSLFKKETNIQLFVGLKVYLSTGELGVIDSAFGQSGKFKVHIPACYLGMKHRVRPEVSVRVSLGTGKCPDSQLTFASA
SIO_010081: EEFSEC
subclass of: SO_0000673
so part of: EEFSEC
location: complement(join(948537..948643,964128..964284,985942..986598,1061915..1062079,1064502..1064598,1094890..1095097,1200688..1201003))
location: region:948537-1201003:-1
so has part: feature:1200688-1201003:-1:exon
so has part: feature:1094890-1095097:-1:exon
so has part: feature:1064502-1064598:-1:exon
so has part: feature:1061915-1062079:-1:exon
so has part: feature:985942-986598:-1:exon
so has part: feature:964128-964284:-1:exon
so has part: feature:948537-948643:-1:exon

XP_032943094.1
type: Protein
SIO_000068: ncbiprotein

position:948537:-1
position: 948537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1200688-1201003:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1094890-1095097:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1064502-1064598:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1061915-1062079:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:985942-986598:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:964128-964284:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:948537-948643:-1:exon

LOC117038648
type: Gene
subclass of: SO_0000704
RO_0002162: 59479
gene: LOC117038648
note: dymeclin-like; Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 1125790..1128828
location: region:1125790-1128828:1
so has part: feature:1125790-1128828:1:exon

117038648
type: Gene
SIO_000068: ncbigene

position:1125790:1
position: 1125790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1128828:1
position: 1128828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1125790-1128828:1:exon

LOC117038648
type: Exon
subclass of: SO_0000147
RO_0002162: 59479
gene: LOC117038648
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC117038648
subclass of: SO_0000673
so part of: LOC117038648
location: 1125790..1125820
location: region:1125790-1125820:1
so has part: feature:1125790-1125820:1:exon

position:1125820:1
position: 1125820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1125790-1125820:1:exon

LOC117038648
type: Exon
subclass of: SO_0000147
RO_0002162: 59479
gene: LOC117038648
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC117038648
subclass of: SO_0000673
so part of: LOC117038648
location: 1125852..1126002
location: region:1125852-1126002:1
so has part: feature:1125852-1126002:1:exon

position:1125852:1
position: 1125852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1126002:1
position: 1126002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1125852-1126002:1:exon

LOC117038648
type: Exon
subclass of: SO_0000147
RO_0002162: 59479
gene: LOC117038648
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC117038648
subclass of: SO_0000673
so part of: LOC117038648
location: 1126570..1127073
location: region:1126570-1127073:1
so has part: feature:1126570-1127073:1:exon

position:1126570:1
position: 1126570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1127073:1
position: 1127073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1126570-1127073:1:exon

LOC117038648
type: Exon
subclass of: SO_0000147
RO_0002162: 59479
gene: LOC117038648
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC117038648
subclass of: SO_0000673
so part of: LOC117038648
location: 1128067..1128335
location: region:1128067-1128335:1
so has part: feature:1128067-1128335:1:exon

position:1128067:1
position: 1128067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1128335:1
position: 1128335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1128067-1128335:1:exon

LOC117038648
type: Exon
subclass of: SO_0000147
RO_0002162: 59479
gene: LOC117038648
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC117038648
subclass of: SO_0000673
so part of: LOC117038648
location: 1128517..1128828
location: region:1128517-1128828:1
so has part: feature:1128517-1128828:1:exon

position:1128517:1
position: 1128517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1128517-1128828:1:exon

RUVBL1
type: Gene
subclass of: SO_0000704
RO_0002162: 59479
gene: RUVBL1
note: RuvB like AAA ATPase 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1218087..1267174
location: region:1218087-1267174:1
so has part: feature:1218087-1267174:1:exon
subclass of: SO_0000010

117011842
type: Gene
SIO_000068: ncbigene

position:1218087:1
position: 1218087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1267174:1
position: 1267174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1218087-1267174:1:exon

RUVBL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: RUVBL1
product: RuvB like AAA ATPase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 mRNAs, 12 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_033087563.1
SIO_010081: RUVBL1
subclass of: SO_0000673
so part of: RUVBL1
location: join(1218087..1218326,1222062..1222148,1235214..1235346,1243827..1243978,1246481..1246570,1247323..1247472,1249252..1249315,1250712..1250910,1258121..1258223,1262778..1262869,1263942..1264388)
location: region:1218087-1264388:1
so has part: feature:1218087-1218326:1:exon
so has part: feature:1222062-1222148:1:exon
so has part: feature:1235214-1235346:1:exon
so has part: feature:1243827-1243978:1:exon
so has part: feature:1246481-1246570:1:exon
so has part: feature:1247323-1247472:1:exon
so has part: feature:1249252-1249315:1:exon
so has part: feature:1250712-1250910:1:exon
so has part: feature:1258121-1258223:1:exon
so has part: feature:1262778-1262869:1:exon
so has part: feature:1263942-1264388:1:exon

position:1264388:1
position: 1264388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1218087-1218326:1:exon

position:1218326:1
position: 1218326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1222062-1222148:1:exon

position:1222062:1
position: 1222062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1222148:1
position: 1222148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1235214-1235346:1:exon

position:1235214:1
position: 1235214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1235346:1
position: 1235346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1243827-1243978:1:exon

position:1243827:1
position: 1243827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1243978:1
position: 1243978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1246481-1246570:1:exon

position:1246481:1
position: 1246481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1246570:1
position: 1246570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1247323-1247472:1:exon

position:1247323:1
position: 1247323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1247472:1
position: 1247472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1249252-1249315:1:exon

position:1249252:1
position: 1249252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1249315:1
position: 1249315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1250712-1250910:1:exon

position:1250712:1
position: 1250712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1250910:1
position: 1250910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1258121-1258223:1:exon

position:1258121:1
position: 1258121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1258223:1
position: 1258223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1262778-1262869:1:exon

position:1262778:1
position: 1262778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1262869:1
position: 1262869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1263942-1264388:1:exon

position:1263942:1
position: 1263942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RUVBL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: RUVBL1
product: RuvB like AAA ATPase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_033087562.1
SIO_010081: RUVBL1
subclass of: SO_0000673
so part of: RUVBL1
location: join(1218090..1218389,1222062..1222148,1235214..1235346,1243827..1243978,1246481..1246570,1247323..1247472,1249252..1249315,1250712..1250910,1258121..1258223,1262778..1262869,1263942..1267174)
location: region:1218090-1267174:1
so has part: feature:1218090-1218389:1:exon
so has part: feature:1222062-1222148:1:exon
so has part: feature:1235214-1235346:1:exon
so has part: feature:1243827-1243978:1:exon
so has part: feature:1246481-1246570:1:exon
so has part: feature:1247323-1247472:1:exon
so has part: feature:1249252-1249315:1:exon
so has part: feature:1250712-1250910:1:exon
so has part: feature:1258121-1258223:1:exon
so has part: feature:1262778-1262869:1:exon
so has part: feature:1263942-1267174:1:exon

position:1218090:1
position: 1218090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1218090-1218389:1:exon

position:1218389:1
position: 1218389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1222062-1222148:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1235214-1235346:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1243827-1243978:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1246481-1246570:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1247323-1247472:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1249252-1249315:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1250712-1250910:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1258121-1258223:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1262778-1262869:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1263942-1267174:1:exon

RUVBL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: RUVBL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ruvB-like 1 isoform X1
translation: MKIEEVKSTTKTQRIASHSHVKGLGLDESGLAKQAASGLVGQENAREVWRAGQGIGALSTPPPRGAAEACGVIVELIKSKKMAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAIGLRIKETKEVYEGEVTELTPCETENPMGGYGKTISHVIIGLKTAKGTKQLKLDPSIFESLQKERVEAGDVIYIEANSGAVKRQGRCDTYATEFDLEAEEYVPLPKGDVHKKKEIIQDVTLHDLDVANARPQGGQDILSMMGQLMKPKKTEITDKLRGEINKVVNKYIDQGIAELVPGVLFVDEVHMLDIECFTYLHRALESSIAPIVIFASNRGNCVIRGTEDITSPHGIPLDLLDRVMIIRTMLYTPQEMKQIIKIRAQTEGINISEEALNHLGEIGTKTTLRYSVQLLTPANLLAKINGKDSIEKEHVEEISELFYDAKSSAKILADQQDKYMK
SIO_010081: RUVBL1
subclass of: SO_0000673
so part of: RUVBL1
location: join(1218186..1218389,1222062..1222148,1235214..1235346,1243827..1243978,1246481..1246570,1247323..1247472,1249252..1249315,1250712..1250910,1258121..1258223,1262778..1262869,1263942..1264101)
location: region:1218186-1264101:1
so has part: feature:1218186-1218389:1:exon
so has part: feature:1222062-1222148:1:exon
so has part: feature:1235214-1235346:1:exon
so has part: feature:1243827-1243978:1:exon
so has part: feature:1246481-1246570:1:exon
so has part: feature:1247323-1247472:1:exon
so has part: feature:1249252-1249315:1:exon
so has part: feature:1250712-1250910:1:exon
so has part: feature:1258121-1258223:1:exon
so has part: feature:1262778-1262869:1:exon
so has part: feature:1263942-1264101:1:exon

XP_032943453.1
type: Protein
SIO_000068: ncbiprotein

position:1218186:1
position: 1218186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1264101:1
position: 1264101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1218186-1218389:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1222062-1222148:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1235214-1235346:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1243827-1243978:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1246481-1246570:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1247323-1247472:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1249252-1249315:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1250712-1250910:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1258121-1258223:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1262778-1262869:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1263942-1264101:1:exon

RUVBL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: RUVBL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ruvB-like 1 isoform X2
translation: MKIEEVKSTTKTQRIASHSHVKGLGLDESGLAKQAASGLVGQENAREACGVIVELIKSKKMAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAIGLRIKETKEVYEGEVTELTPCETENPMGGYGKTISHVIIGLKTAKGTKQLKLDPSIFESLQKERVEAGDVIYIEANSGAVKRQGRCDTYATEFDLEAEEYVPLPKGDVHKKKEIIQDVTLHDLDVANARPQGGQDILSMMGQLMKPKKTEITDKLRGEINKVVNKYIDQGIAELVPGVLFVDEVHMLDIECFTYLHRALESSIAPIVIFASNRGNCVIRGTEDITSPHGIPLDLLDRVMIIRTMLYTPQEMKQIIKIRAQTEGINISEEALNHLGEIGTKTTLRYSVQLLTPANLLAKINGKDSIEKEHVEEISELFYDAKSSAKILADQQDKYMK
SIO_010081: RUVBL1
subclass of: SO_0000673
so part of: RUVBL1
location: join(1218186..1218326,1222062..1222148,1235214..1235346,1243827..1243978,1246481..1246570,1247323..1247472,1249252..1249315,1250712..1250910,1258121..1258223,1262778..1262869,1263942..1264101)
location: region:1218186-1264101:1
so has part: feature:1218186-1218326:1:exon
so has part: feature:1222062-1222148:1:exon
so has part: feature:1235214-1235346:1:exon
so has part: feature:1243827-1243978:1:exon
so has part: feature:1246481-1246570:1:exon
so has part: feature:1247323-1247472:1:exon
so has part: feature:1249252-1249315:1:exon
so has part: feature:1250712-1250910:1:exon
so has part: feature:1258121-1258223:1:exon
so has part: feature:1262778-1262869:1:exon
so has part: feature:1263942-1264101:1:exon

XP_032943454.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1218186-1218326:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1222062-1222148:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1235214-1235346:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1243827-1243978:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1246481-1246570:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1247323-1247472:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1249252-1249315:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1250712-1250910:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1258121-1258223:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1262778-1262869:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1263942-1264101:1:exon

SEC61A1
type: Gene
subclass of: SO_0000704
RO_0002162: 59479
gene: SEC61A1
note: SEC61 translocon subunit alpha 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1273213..1288922)
location: region:1273213-1288922:-1
so has part: feature:1273213-1288922:-1:exon
subclass of: SO_0000010

117011664
type: Gene
SIO_000068: ncbigene

position:1273213:-1
position: 1273213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1288922:-1
position: 1288922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1273213-1288922:-1:exon

SEC61A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: SEC61A1
product: SEC61 translocon subunit alpha 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 mRNAs, 29 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_033087159.1
SIO_010081: SEC61A1
subclass of: SO_0000673
so part of: SEC61A1
location: complement(join(1273213..1275265,1275884..1275960,1276274..1276465,1276732..1276929,1278206..1278366,1282176..1282329,1282597..1282706,1284166..1284297,1285288..1285366,1285466..1285531,1288455..1288522,1288755..1288922))
location: region:1273213-1288922:-1
so has part: feature:1288755-1288922:-1:exon
so has part: feature:1288455-1288522:-1:exon
so has part: feature:1285466-1285531:-1:exon
so has part: feature:1285288-1285366:-1:exon
so has part: feature:1284166-1284297:-1:exon
so has part: feature:1282597-1282706:-1:exon
so has part: feature:1282176-1282329:-1:exon
so has part: feature:1278206-1278366:-1:exon
so has part: feature:1276732-1276929:-1:exon
so has part: feature:1276274-1276465:-1:exon
so has part: feature:1275884-1275960:-1:exon
so has part: feature:1273213-1275265:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1288755-1288922:-1:exon

position:1288755:-1
position: 1288755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1288455-1288522:-1:exon

position:1288455:-1
position: 1288455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1288522:-1
position: 1288522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1285466-1285531:-1:exon

position:1285466:-1
position: 1285466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1285531:-1
position: 1285531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1285288-1285366:-1:exon

position:1285288:-1
position: 1285288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1285366:-1
position: 1285366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1284166-1284297:-1:exon

position:1284166:-1
position: 1284166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1284297:-1
position: 1284297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1282597-1282706:-1:exon

position:1282597:-1
position: 1282597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1282706:-1
position: 1282706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1282176-1282329:-1:exon

position:1282176:-1
position: 1282176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1282329:-1
position: 1282329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1278206-1278366:-1:exon

position:1278206:-1
position: 1278206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1278366:-1
position: 1278366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1276732-1276929:-1:exon

position:1276732:-1
position: 1276732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1276929:-1
position: 1276929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1276274-1276465:-1:exon

position:1276274:-1
position: 1276274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1276465:-1
position: 1276465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1275884-1275960:-1:exon

position:1275884:-1
position: 1275884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1275960:-1
position: 1275960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1273213-1275265:-1:exon

position:1275265:-1
position: 1275265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SEC61A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: SEC61A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein transport protein Sec61 subunit alpha
translation: MAIKFLEVIKPFCVILPEIQKPERKIQFKEKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWIRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQKLFGMIITIGQSIVYVMTGMYGDPSEMGAGICLLITIQLFVAGLIVLLLDELLQKGYGLGSGISLFIATNICETIVWKAFSPTTVNTGRGMEFEGAIIALFHLLATRTDKVRALREAFYRQNLPNLMNLIATIFVFAVVIYFQGFRVDLPIKSARYRGQYNTYPIKLFYTSNIPIILQSALVSNLYVISQMLSARFSGNLLVSLLGTWSDTSSGGPARAYPVGGLCYYLSPPESFGSVLEDPVHAIVYIVFMLGSCAFFSKTWIEVSGSSAKDVAKQLKEQQMVMRGHRETSMVHELNRYIPTAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTIIYQYFEIFVKEQSEVGSMGALLF
SIO_010081: SEC61A1
subclass of: SO_0000673
so part of: SEC61A1
location: complement(join(1275079..1275265,1275884..1275960,1276274..1276465,1276732..1276929,1278206..1278366,1282176..1282329,1282597..1282706,1284166..1284297,1285288..1285366,1285466..1285531,1288455..1288522,1288755..1288761))
location: region:1275079-1288761:-1
so has part: feature:1288755-1288761:-1:exon
so has part: feature:1288455-1288522:-1:exon
so has part: feature:1285466-1285531:-1:exon
so has part: feature:1285288-1285366:-1:exon
so has part: feature:1284166-1284297:-1:exon
so has part: feature:1282597-1282706:-1:exon
so has part: feature:1282176-1282329:-1:exon
so has part: feature:1278206-1278366:-1:exon
so has part: feature:1276732-1276929:-1:exon
so has part: feature:1276274-1276465:-1:exon
so has part: feature:1275884-1275960:-1:exon
so has part: feature:1275079-1275265:-1:exon

XP_032943050.1
type: Protein
SIO_000068: ncbiprotein

position:1275079:-1
position: 1275079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1288761:-1
position: 1288761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1288755-1288761:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1288455-1288522:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1285466-1285531:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1285288-1285366:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1284166-1284297:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1282597-1282706:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1282176-1282329:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1278206-1278366:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1276732-1276929:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1276274-1276465:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1275884-1275960:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1275079-1275265:-1:exon

KBTBD12
type: Gene
subclass of: SO_0000704
RO_0002162: 59479
gene: KBTBD12
note: kelch repeat and BTB domain containing 12; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1378053..1462686)
location: region:1378053-1462686:-1
so has part: feature:1378053-1462686:-1:exon
subclass of: SO_0000010

117011955
type: Gene
SIO_000068: ncbigene

position:1378053:-1
position: 1378053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1462686:-1
position: 1462686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1378053-1462686:-1:exon

KBTBD12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: KBTBD12
product: kelch repeat and BTB domain containing 12, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033087806.1
SIO_010081: KBTBD12
subclass of: SO_0000673
so part of: KBTBD12
location: complement(join(1378053..1378257,1382821..1383003,1410735..1410932,1446811..1446961,1449445..1449715,1453317..1454498,1462332..1462686))
location: region:1378053-1462686:-1
so has part: feature:1462332-1462686:-1:exon
so has part: feature:1453317-1454498:-1:exon
so has part: feature:1449445-1449715:-1:exon
so has part: feature:1446811-1446961:-1:exon
so has part: feature:1410735-1410932:-1:exon
so has part: feature:1382821-1383003:-1:exon
so has part: feature:1378053-1378257:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1462332-1462686:-1:exon

position:1462332:-1
position: 1462332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1453317-1454498:-1:exon

position:1453317:-1
position: 1453317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1454498:-1
position: 1454498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1449445-1449715:-1:exon

position:1449445:-1
position: 1449445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1449715:-1
position: 1449715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1446811-1446961:-1:exon

position:1446811:-1
position: 1446811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1446961:-1
position: 1446961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1410735-1410932:-1:exon

position:1410735:-1
position: 1410735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1410932:-1
position: 1410932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1382821-1383003:-1:exon

position:1382821:-1
position: 1382821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1383003:-1
position: 1383003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1378053-1378257:-1:exon

position:1378257:-1
position: 1378257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KBTBD12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: KBTBD12
product: kelch repeat and BTB domain containing 12, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033087807.1
SIO_010081: KBTBD12
subclass of: SO_0000673
so part of: KBTBD12
location: complement(join(1378053..1378257,1382821..1383003,1410735..1410932,1446811..1446961,1449445..1449715,1453317..1454498,1459243..1459298))
location: region:1378053-1459298:-1
so has part: feature:1459243-1459298:-1:exon
so has part: feature:1453317-1454498:-1:exon
so has part: feature:1449445-1449715:-1:exon
so has part: feature:1446811-1446961:-1:exon
so has part: feature:1410735-1410932:-1:exon
so has part: feature:1382821-1383003:-1:exon
so has part: feature:1378053-1378257:-1:exon

position:1459298:-1
position: 1459298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1459243-1459298:-1:exon

position:1459243:-1
position: 1459243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1453317-1454498:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1449445-1449715:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1446811-1446961:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1410735-1410932:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1382821-1383003:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1378053-1378257:-1:exon

KBTBD12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: KBTBD12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kelch repeat and BTB domain-containing protein 12 isoform X1
translation: MECKIEGKEKYQHSLNLLNKVKNMKELAEMIDVVLIAEGEKFPCHRLVLAAFSPYFKAMFTCGLLECNQREVILYDITAEGVSVILNYMYNAALEINNANVQTVTMAAYFMQIEEVFSVCQKYMMDHMDASNCIGIHYFAQQIGAEDLSDQSKKYLYQHFAEVSLHEEILEIEVHQFLTLIKSDDLNISREESILDLVLRWVNHNEELRKEHLAELLKQVRLELINPSFLRQALKRNTMLLCDANCIDIIQNTFKAFKTPHQHPLNLRYGMETTSLLLCIGTNTSGIRSRHRNYGDASFCYDPASQKTYFVSSPKYGEGLGTVCTGVVMENNAIIVAGEASASKLARQKNKNVEIYRYHDRGNQSWEKLCTTEFRELYALGSVHNDLYVIGGQMKIKNQYLITNCVDKYSVEWDNWKRVSPLPVQLACHAVVTVNNKLHVIGGWTPQMDLPDEEPDRLSNKLLQYDPSQDQWTERAPMKYSKYRFSTAVVNSEIYVLGGIGCMGRDKGQVRKCLDVVEIYNPDGDFWREGPPMPSPLLSLRTNSTNAGVVDGKLYVCGGFRGADRHEVISKEILELDPWENQWSVVAIDVLMHDSYDVCLVARMNPRDLIPPPLDLVEEGKEH
SIO_010081: KBTBD12
subclass of: SO_0000673
so part of: KBTBD12
location: complement(join(1382822..1383003,1410735..1410932,1446811..1446961,1449445..1449715,1453317..1454386))
location: region:1382822-1454386:-1
so has part: feature:1453317-1454386:-1:exon
so has part: feature:1449445-1449715:-1:exon
so has part: feature:1446811-1446961:-1:exon
so has part: feature:1410735-1410932:-1:exon
so has part: feature:1382822-1383003:-1:exon

XP_032943697.1
type: Protein
SIO_000068: ncbiprotein

position:1382822:-1
position: 1382822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1454386:-1
position: 1454386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1453317-1454386:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1449445-1449715:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1446811-1446961:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1410735-1410932:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1382822-1383003:-1:exon

KBTBD12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: KBTBD12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kelch repeat and BTB domain-containing protein 12 isoform X1
translation: MECKIEGKEKYQHSLNLLNKVKNMKELAEMIDVVLIAEGEKFPCHRLVLAAFSPYFKAMFTCGLLECNQREVILYDITAEGVSVILNYMYNAALEINNANVQTVTMAAYFMQIEEVFSVCQKYMMDHMDASNCIGIHYFAQQIGAEDLSDQSKKYLYQHFAEVSLHEEILEIEVHQFLTLIKSDDLNISREESILDLVLRWVNHNEELRKEHLAELLKQVRLELINPSFLRQALKRNTMLLCDANCIDIIQNTFKAFKTPHQHPLNLRYGMETTSLLLCIGTNTSGIRSRHRNYGDASFCYDPASQKTYFVSSPKYGEGLGTVCTGVVMENNAIIVAGEASASKLARQKNKNVEIYRYHDRGNQSWEKLCTTEFRELYALGSVHNDLYVIGGQMKIKNQYLITNCVDKYSVEWDNWKRVSPLPVQLACHAVVTVNNKLHVIGGWTPQMDLPDEEPDRLSNKLLQYDPSQDQWTERAPMKYSKYRFSTAVVNSEIYVLGGIGCMGRDKGQVRKCLDVVEIYNPDGDFWREGPPMPSPLLSLRTNSTNAGVVDGKLYVCGGFRGADRHEVISKEILELDPWENQWSVVAIDVLMHDSYDVCLVARMNPRDLIPPPLDLVEEGKEH
SIO_010081: KBTBD12
subclass of: SO_0000673
so part of: KBTBD12
location: complement(join(1382822..1383003,1410735..1410932,1446811..1446961,1449445..1449715,1453317..1454386))
location: region:1382822-1454386:-1
so has part: feature:1453317-1454386:-1:exon
so has part: feature:1449445-1449715:-1:exon
so has part: feature:1446811-1446961:-1:exon
so has part: feature:1410735-1410932:-1:exon
so has part: feature:1382822-1383003:-1:exon

XP_032943698.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1453317-1454386:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1449445-1449715:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1446811-1446961:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1410735-1410932:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1382822-1383003:-1:exon

LOC117011957
type: Gene
subclass of: SO_0000704
RO_0002162: 59479
gene: LOC117011957
note: developmental pluripotency-associated protein 2-like; Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 1383230..1384178
location: region:1383230-1384178:1
so has part: feature:1383230-1384178:1:exon

117011957
type: Gene
SIO_000068: ncbigene

position:1383230:1
position: 1383230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1384178:1
position: 1384178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1383230-1384178:1:exon

LOC117011957
type: Exon
subclass of: SO_0000147
RO_0002162: 59479
gene: LOC117011957
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 58% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117011957
subclass of: SO_0000673
so part of: LOC117011957
location: 1383230..1384178
location: region:1383230-1384178:1
so has part: feature:1383230-1384178:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1383230-1384178:1:exon

KBTBD12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: KBTBD12
product: kelch repeat and BTB domain containing 12, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_033087808.1
SIO_010081: KBTBD12
subclass of: SO_0000673
so part of: KBTBD12
location: complement(join(1423276..1423353,1446811..1446961,1449445..1449715,1453317..1454498,1462332..1462686))
location: region:1423276-1462686:-1
so has part: feature:1462332-1462686:-1:exon
so has part: feature:1453317-1454498:-1:exon
so has part: feature:1449445-1449715:-1:exon
so has part: feature:1446811-1446961:-1:exon
so has part: feature:1423276-1423353:-1:exon

position:1423276:-1
position: 1423276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1462332-1462686:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1453317-1454498:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1449445-1449715:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1446811-1446961:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1423276-1423353:-1:exon

position:1423353:-1
position: 1423353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KBTBD12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: KBTBD12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kelch repeat and BTB domain-containing protein 12 isoform X2
translation: MECKIEGKEKYQHSLNLLNKVKNMKELAEMIDVVLIAEGEKFPCHRLVLAAFSPYFKAMFTCGLLECNQREVILYDITAEGVSVILNYMYNAALEINNANVQTVTMAAYFMQIEEVFSVCQKYMMDHMDASNCIGIHYFAQQIGAEDLSDQSKKYLYQHFAEVSLHEEILEIEVHQFLTLIKSDDLNISREESILDLVLRWVNHNEELRKEHLAELLKQVRLELINPSFLRQALKRNTMLLCDANCIDIIQNTFKAFKTPHQHPLNLRYGMETTSLLLCIGTNTSGIRSRHRNYGDASFCYDPASQKTYFVSSPKYGEGLGTVCTGVVMENNAIIVAGEASASKLARQKNKNVEIYRYHDRGNQSWEKLCTTEFRELYALGSVHNDLYVIGGQMKIKNQYLITNCVDKYSVEWDNWKRVSPLPVQLACHAVVTVNNKLHVIGGWTPQMDLPDEEPDRLSNKLLQYDPSQDQWTERAPMKYSKYRFSTAVVNSEIYVLGDITT
SIO_010081: KBTBD12
subclass of: SO_0000673
so part of: KBTBD12
location: complement(join(1423337..1423353,1446811..1446961,1449445..1449715,1453317..1454386))
location: region:1423337-1454386:-1
so has part: feature:1453317-1454386:-1:exon
so has part: feature:1449445-1449715:-1:exon
so has part: feature:1446811-1446961:-1:exon
so has part: feature:1423337-1423353:-1:exon

XP_032943699.1
type: Protein
SIO_000068: ncbiprotein

position:1423337:-1
position: 1423337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1453317-1454386:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1449445-1449715:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1446811-1446961:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1423337-1423353:-1:exon

LOC117011958
type: Gene
subclass of: SO_0000704
RO_0002162: 59479
gene: LOC117011958
note: DNA-directed RNA polymerase II subunit RPB4-like; Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1429446..1430500)
location: region:1429446-1430500:-1
so has part: feature:1429446-1430500:-1:exon

117011958
type: Gene
SIO_000068: ncbigene

position:1429446:-1
position: 1429446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1430500:-1
position: 1430500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1429446-1430500:-1:exon

LOC117011958
type: Exon
subclass of: SO_0000147
RO_0002162: 59479
gene: LOC117011958
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117011958
subclass of: SO_0000673
so part of: LOC117011958
location: complement(1429446..1430500)
location: region:1429446-1430500:-1
so has part: feature:1429446-1430500:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1429446-1430500:-1:exon

LOC117038664
type: Gene
subclass of: SO_0000704
RO_0002162: 59479
gene: LOC117038664
note: 60S ribosomal protein L3-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1558276..>1559500)
location: region:1558276-1559500:-1
so has part: feature:1558276-1559500:-1:exon
subclass of: SO_0000010

117038664
type: Gene
SIO_000068: ncbigene

position:1558276:-1
position: 1558276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1559500:-1
position: 1559500
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1558276-1559500:-1:exon

LOC117038664
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: LOC117038664
product: 60S ribosomal protein L3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033135564.1
SIO_010081: LOC117038664
subclass of: SO_0000673
so part of: LOC117038664
location: complement(1558276..>1559500)
location: region:1558276-1559500:-1
so has part: feature:1558276-1559500:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1558276-1559500:-1:exon

LOC117038664
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: LOC117038664
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 60S ribosomal protein L3-like
translation: HGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTTVETPLMVVVGIVGYVETPRGLRTFKTIFAEHISDECKRRFYKNWHKSKKKAFTKYCKKWQDDDGKKQLEKAFNSMKKYCQVIRVIAHTQMRLLPLRQKKAHLMEIQVNGGTVAEKLDRARERLEQQVPVNQVFGQDEMIDVIGVTKGKGFKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHHRTEINKKIYKIGRGYLIKDGKLIKNNASTDYDLSDKSINPLGGFVHYGEVTNDSVMLKGCVVGTKKRVLTLHKSLLVQTKRRALEKIDLKFIDTTSKFGHGRFQTVEKKAFMGPLKKDRIAKEEGA
SIO_010081: LOC117038664
subclass of: SO_0000673
so part of: LOC117038664
location: complement(1558322..>1559500)
location: region:1558322-1559500:-1
so has part: feature:1558322-1559500:-1:exon

XP_032991455.1
type: Protein
SIO_000068: ncbiprotein

position:1558322:-1
position: 1558322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1558322-1559500:-1:exon

MGLL
type: Gene
subclass of: SO_0000704
RO_0002162: 59479
gene: MGLL
note: monoglyceride lipase; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1600608..1743491
location: region:1600608-1743491:1
so has part: feature:1600608-1743491:1:exon
subclass of: SO_0000010

117011637
type: Gene
SIO_000068: ncbigene

position:1600608:1
position: 1600608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1743491:1
position: 1743491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1600608-1743491:1:exon

MGLL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: MGLL
product: monoglyceride lipase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_033087104.1
SIO_010081: MGLL
subclass of: SO_0000673
so part of: MGLL
location: join(1600608..1600763,1602048..1602192,1662909..1663015,1712029..1712165,1713487..1713597,1723904..1723993,1738896..1739111,1741678..1743491)
location: region:1600608-1743491:1
so has part: feature:1600608-1600763:1:exon
so has part: feature:1602048-1602192:1:exon
so has part: feature:1662909-1663015:1:exon
so has part: feature:1712029-1712165:1:exon
so has part: feature:1713487-1713597:1:exon
so has part: feature:1723904-1723993:1:exon
so has part: feature:1738896-1739111:1:exon
so has part: feature:1741678-1743491:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1600608-1600763:1:exon

position:1600763:1
position: 1600763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1602048-1602192:1:exon

position:1602048:1
position: 1602048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1602192:1
position: 1602192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1662909-1663015:1:exon

position:1662909:1
position: 1662909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1663015:1
position: 1663015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1712029-1712165:1:exon

position:1712029:1
position: 1712029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1712165:1
position: 1712165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1713487-1713597:1:exon

position:1713487:1
position: 1713487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1713597:1
position: 1713597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1723904-1723993:1:exon

position:1723904:1
position: 1723904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1723993:1
position: 1723993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1738896-1739111:1:exon

position:1738896:1
position: 1738896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1739111:1
position: 1739111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1741678-1743491:1:exon

position:1741678:1
position: 1741678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MGLL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: MGLL
product: monoglyceride lipase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_033087102.1
SIO_010081: MGLL
subclass of: SO_0000673
so part of: MGLL
location: join(1600979..1601558,1602048..1602192,1662909..1663015,1712029..1712165,1713487..1713597,1723904..1723993,1738896..1739111,1741678..1743491)
location: region:1600979-1743491:1
so has part: feature:1600979-1601558:1:exon
so has part: feature:1602048-1602192:1:exon
so has part: feature:1662909-1663015:1:exon
so has part: feature:1712029-1712165:1:exon
so has part: feature:1713487-1713597:1:exon
so has part: feature:1723904-1723993:1:exon
so has part: feature:1738896-1739111:1:exon
so has part: feature:1741678-1743491:1:exon

position:1600979:1
position: 1600979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1600979-1601558:1:exon

position:1601558:1
position: 1601558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1602048-1602192:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1662909-1663015:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1712029-1712165:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1713487-1713597:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1723904-1723993:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1738896-1739111:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1741678-1743491:1:exon

MGLL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: MGLL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: monoglyceride lipase isoform X1
translation: MPRCDRGDEGTALNCLALILKAVVVVECKSHDKMETGLGDPFKMPEESSPRRTPQSVPYQDLPHLVNADGQYLFCRYWKPEGTPKALIFVSHGAGEHCGRYDELAQMLVGLELLVFAHDHVGHGQSEGERMVVSDFHVFIRDVLQHVDTVQKDYPGLPVFLLGHSMGGAIAILTAAEKPGYFSGMVLISPLVLANPESATTFKVLAAKVLNLVLPNMSLGPIDASVLSRNKTEVDLYNTDPLICRAGLKVCFGIQLLNAVSRVERALSKLTLPFLLLQGSADRLCDSKGAYLLMESAKSQDKTLKIYEGAYHVLHKELPEVTNSVFHEINMWISQRTAAARTGSPP
SIO_010081: MGLL
subclass of: SO_0000673
so part of: MGLL
location: join(1601450..1601558,1602048..1602192,1662909..1663015,1712029..1712165,1713487..1713597,1723904..1723993,1738896..1739111,1741678..1741803)
location: region:1601450-1741803:1
so has part: feature:1601450-1601558:1:exon
so has part: feature:1602048-1602192:1:exon
so has part: feature:1662909-1663015:1:exon
so has part: feature:1712029-1712165:1:exon
so has part: feature:1713487-1713597:1:exon
so has part: feature:1723904-1723993:1:exon
so has part: feature:1738896-1739111:1:exon
so has part: feature:1741678-1741803:1:exon

XP_032942993.1
type: Protein
SIO_000068: ncbiprotein

position:1601450:1
position: 1601450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1741803:1
position: 1741803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1601450-1601558:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1602048-1602192:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1662909-1663015:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1712029-1712165:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1713487-1713597:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1723904-1723993:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1738896-1739111:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1741678-1741803:1:exon

MGLL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: MGLL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: monoglyceride lipase isoform X2
translation: MPEESSPRRTPQSVPYQDLPHLVNADGQYLFCRYWKPEGTPKALIFVSHGAGEHCGRYDELAQMLVGLELLVFAHDHVGHGQSEGERMVVSDFHVFIRDVLQHVDTVQKDYPGLPVFLLGHSMGGAIAILTAAEKPGYFSGMVLISPLVLANPESATTFKVLAAKVLNLVLPNMSLGPIDASVLSRNKTEVDLYNTDPLICRAGLKVCFGIQLLNAVSRVERALSKLTLPFLLLQGSADRLCDSKGAYLLMESAKSQDKTLKIYEGAYHVLHKELPEVTNSVFHEINMWISQRTAAARTGSPP
SIO_010081: MGLL
subclass of: SO_0000673
so part of: MGLL
location: join(1602068..1602192,1662909..1663015,1712029..1712165,1713487..1713597,1723904..1723993,1738896..1739111,1741678..1741803)
location: region:1602068-1741803:1
so has part: feature:1602068-1602192:1:exon
so has part: feature:1662909-1663015:1:exon
so has part: feature:1712029-1712165:1:exon
so has part: feature:1713487-1713597:1:exon
so has part: feature:1723904-1723993:1:exon
so has part: feature:1738896-1739111:1:exon
so has part: feature:1741678-1741803:1:exon

XP_032942995.1
type: Protein
SIO_000068: ncbiprotein

position:1602068:1
position: 1602068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1602068-1602192:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1662909-1663015:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1712029-1712165:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1713487-1713597:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1723904-1723993:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1738896-1739111:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1741678-1741803:1:exon

ABTB1
type: Gene
subclass of: SO_0000704
RO_0002162: 59479
gene: ABTB1
note: ankyrin repeat and BTB domain containing 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1753195..>1760701)
location: region:1753195-1760701:-1
so has part: feature:1753195-1760701:-1:exon
subclass of: SO_0000010

117038665
type: Gene
SIO_000068: ncbigene

position:1753195:-1
position: 1753195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1760701:-1
position: 1760701
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1753195-1760701:-1:exon

ABTB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: ABTB1
product: ankyrin repeat and BTB domain containing 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 10 bases in 7 codons; deleted 4 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 63% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033135565.1
SIO_010081: ABTB1
subclass of: SO_0000673
so part of: ABTB1
location: complement(join(1753195..1754477,1754542..1754738,1756163..1756330,1756423..1756521,1756800..1756926,1757013..1757128,1757513..1757564,1757670..1757831,1758001..1758144,1759182..1759236,1759320..1759381,1760577..>1760701))
location: region:1753195-1760701:-1
so has part: feature:1760577-1760701:-1:exon
so has part: feature:1759320-1759381:-1:exon
so has part: feature:1759182-1759236:-1:exon
so has part: feature:1758001-1758144:-1:exon
so has part: feature:1757670-1757831:-1:exon
so has part: feature:1757513-1757564:-1:exon
so has part: feature:1757013-1757128:-1:exon
so has part: feature:1756800-1756926:-1:exon
so has part: feature:1756423-1756521:-1:exon
so has part: feature:1756163-1756330:-1:exon
so has part: feature:1754542-1754738:-1:exon
so has part: feature:1753195-1754477:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1760577-1760701:-1:exon

position:1760577:-1
position: 1760577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1759320-1759381:-1:exon

position:1759320:-1
position: 1759320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1759381:-1
position: 1759381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1759182-1759236:-1:exon

position:1759182:-1
position: 1759182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1759236:-1
position: 1759236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1758001-1758144:-1:exon

position:1758001:-1
position: 1758001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1758144:-1
position: 1758144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1757670-1757831:-1:exon

position:1757670:-1
position: 1757670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1757831:-1
position: 1757831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1757513-1757564:-1:exon

position:1757513:-1
position: 1757513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1757564:-1
position: 1757564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1757013-1757128:-1:exon

position:1757013:-1
position: 1757013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1757128:-1
position: 1757128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1756800-1756926:-1:exon

position:1756800:-1
position: 1756800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1756926:-1
position: 1756926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1756423-1756521:-1:exon

position:1756423:-1
position: 1756423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1756521:-1
position: 1756521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1756163-1756330:-1:exon

position:1756163:-1
position: 1756163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1756330:-1
position: 1756330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1754542-1754738:-1:exon

position:1754542:-1
position: 1754542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1754738:-1
position: 1754738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1753195-1754477:-1:exon

position:1754477:-1
position: 1754477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ABTB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: ABTB1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 10 bases in 7 codons; deleted 4 bases in 2 codons; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(1756806..1756808),aa:OTHER)
product: LOW QUALITY PROTEIN: ankyrin repeat and BTB/POZ domain-containing protein 1
translation: HPAGARRSRCFLCCLGSFGLCPPTDTGDLSASCRKGDVGRVRYRLEQRDXEVNTWDEWDSTPLYYACLXGHEDLVLYLLTNGTHCEATALPGAVCXYGAASDYIRWALRDYQQVTAPCRRWDYYNDFLQWLLEQGIHSNVVFVVHGKPFQAHRCILGAHSAYFFNVLDTKWKGKSVIVLRHPLVPVAFGALLQYLYTDDPQGHMDVGVEHISDXERLGKQCQLLDLLSDLEAKCKEVSEFVASQSGTFGKVLSIRPPPEDPQLREDLALLADCALPPELXGSGDLGELPFSCPSGFNICPDVCFRVEGWSYLCHKAFFCGCSDYFWALLYDHFQENEGMEASGGLPAVTLPSLSPDIFTHVLYYMYTDHTELPPEAADDVLSVADMFLLPGLKXDCGCRLAQLLDEDNVVGVWRXTKRFRLARLKDQYTEYMAKVIEKLVERKDCEKAVQEEAKPVAXRQGRTPSPLVDDIHFHVTSRTQTYGNTEETQHEIHALEDLLLFISLDC
SIO_010081: ABTB1
subclass of: SO_0000673
so part of: ABTB1
location: complement(join(1754270..1754477,1754542..1754738,1756163..1756330,1756423..1756521,1756800..1756926,1757013..1757128,1757513..1757564,1757670..1757831,1758001..1758144,1759182..1759236,1759320..1759381,1760577..>1760701))
location: region:1754270-1760701:-1
so has part: feature:1760577-1760701:-1:exon
so has part: feature:1759320-1759381:-1:exon
so has part: feature:1759182-1759236:-1:exon
so has part: feature:1758001-1758144:-1:exon
so has part: feature:1757670-1757831:-1:exon
so has part: feature:1757513-1757564:-1:exon
so has part: feature:1757013-1757128:-1:exon
so has part: feature:1756800-1756926:-1:exon
so has part: feature:1756423-1756521:-1:exon
so has part: feature:1756163-1756330:-1:exon
so has part: feature:1754542-1754738:-1:exon
so has part: feature:1754270-1754477:-1:exon

XP_032991456.1
type: Protein
SIO_000068: ncbiprotein

position:1754270:-1
position: 1754270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1760577-1760701:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1759320-1759381:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1759182-1759236:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1758001-1758144:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1757670-1757831:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1757513-1757564:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1757013-1757128:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1756800-1756926:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1756423-1756521:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1756163-1756330:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1754542-1754738:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1754270-1754477:-1:exon

PODXL2
type: Gene
subclass of: SO_0000704
RO_0002162: 59479
gene: PODXL2
note: podocalyxin like 2; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1760769..1806977)
location: region:1760769-1806977:-1
so has part: feature:1760769-1806977:-1:exon
subclass of: SO_0000010

117011947
type: Gene
SIO_000068: ncbigene

position:1760769:-1
position: 1760769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1806977:-1
position: 1806977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1760769-1806977:-1:exon

PODXL2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: PODXL2
product: podocalyxin like 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_033087797.1
SIO_010081: PODXL2
subclass of: SO_0000673
so part of: PODXL2
location: complement(join(1760769..1761226,1761852..1762031,1764380..1764441,1765016..1765172,1775239..1775313,1776139..1776890,1800314..1800592,1806845..1806977))
location: region:1760769-1806977:-1
so has part: feature:1806845-1806977:-1:exon
so has part: feature:1800314-1800592:-1:exon
so has part: feature:1776139-1776890:-1:exon
so has part: feature:1775239-1775313:-1:exon
so has part: feature:1765016-1765172:-1:exon
so has part: feature:1764380-1764441:-1:exon
so has part: feature:1761852-1762031:-1:exon
so has part: feature:1760769-1761226:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1806845-1806977:-1:exon

position:1806845:-1
position: 1806845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1800314-1800592:-1:exon

position:1800314:-1
position: 1800314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1800592:-1
position: 1800592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1776139-1776890:-1:exon

position:1776139:-1
position: 1776139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1776890:-1
position: 1776890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1775239-1775313:-1:exon

position:1775239:-1
position: 1775239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1775313:-1
position: 1775313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1765016-1765172:-1:exon

position:1765016:-1
position: 1765016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1765172:-1
position: 1765172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1764380-1764441:-1:exon

position:1764380:-1
position: 1764380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1764441:-1
position: 1764441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1761852-1762031:-1:exon

position:1761852:-1
position: 1761852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1762031:-1
position: 1762031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1760769-1761226:-1:exon

position:1761226:-1
position: 1761226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PODXL2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: PODXL2
product: podocalyxin like 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_033087798.1
SIO_010081: PODXL2
subclass of: SO_0000673
so part of: PODXL2
location: complement(join(1760769..1761226,1761852..1762031,1775239..1775313,1776139..1776890,1800314..1800592,1806782..1806964))
location: region:1760769-1806964:-1
so has part: feature:1806782-1806964:-1:exon
so has part: feature:1800314-1800592:-1:exon
so has part: feature:1776139-1776890:-1:exon
so has part: feature:1775239-1775313:-1:exon
so has part: feature:1761852-1762031:-1:exon
so has part: feature:1760769-1761226:-1:exon

position:1806964:-1
position: 1806964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1806782-1806964:-1:exon

position:1806782:-1
position: 1806782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1800314-1800592:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1776139-1776890:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1775239-1775313:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1761852-1762031:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1760769-1761226:-1:exon

PODXL2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: PODXL2
product: podocalyxin like 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_033087796.1
SIO_010081: PODXL2
subclass of: SO_0000673
so part of: PODXL2
location: complement(join(1760769..1761226,1761852..1762031,1764380..1764441,1765025..1765172,1775239..1775313,1776139..1776890,1800314..1800592,1806782..1806964))
location: region:1760769-1806964:-1
so has part: feature:1806782-1806964:-1:exon
so has part: feature:1800314-1800592:-1:exon
so has part: feature:1776139-1776890:-1:exon
so has part: feature:1775239-1775313:-1:exon
so has part: feature:1765025-1765172:-1:exon
so has part: feature:1764380-1764441:-1:exon
so has part: feature:1761852-1762031:-1:exon
so has part: feature:1760769-1761226:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1806782-1806964:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1800314-1800592:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1776139-1776890:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1775239-1775313:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1765025-1765172:-1:exon

position:1765025:-1
position: 1765025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1764380-1764441:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1761852-1762031:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1760769-1761226:-1:exon

PODXL2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: PODXL2
product: podocalyxin like 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_033087795.1
SIO_010081: PODXL2
subclass of: SO_0000673
so part of: PODXL2
location: complement(join(1760769..1761226,1761852..1762031,1764380..1764441,1765016..1765172,1775239..1775313,1776139..1776890,1800314..1800592,1806782..1806963))
location: region:1760769-1806963:-1
so has part: feature:1806782-1806963:-1:exon
so has part: feature:1800314-1800592:-1:exon
so has part: feature:1776139-1776890:-1:exon
so has part: feature:1775239-1775313:-1:exon
so has part: feature:1765016-1765172:-1:exon
so has part: feature:1764380-1764441:-1:exon
so has part: feature:1761852-1762031:-1:exon
so has part: feature:1760769-1761226:-1:exon

position:1806963:-1
position: 1806963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1806782-1806963:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1800314-1800592:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1776139-1776890:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1775239-1775313:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1765016-1765172:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1764380-1764441:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1761852-1762031:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1760769-1761226:-1:exon

PODXL2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: PODXL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: podocalyxin-like protein 2 isoform X3
translation: MGWLLRDVRLLPLLPPLLLLLAGRVSLGTFAAGSDEPGPEGLTSTSLLDLLLPTGLDPLGSEEPSEPMGLGAGLEAPGSGFPSEESEESRILQPPQYFWEEEEELNDSSLDLGPTADYGFPDLTEKAGPIEDTSQGQKMPSLPSSLPKMNLVEPPWPMALGEEEEEEEEKEEIEKEEEEEEEELLPVNRTQEKAQTQVYDFSLTSSSQTPRAPKHRHEDSGDQASSGVEVGSNMEPSLSPPSVTPNTVTLGGLDFASQEAGGTMLPAAGHEVEFEAPQEASEKATVGTAGLEVLSLASFPQAEAPSGAATSSEDPLYPGASTALPQYPQHMELTPSSATLGQEDLSQQPQEGQSAEAQSRIPWDSTQVICKDWSNLAGKNYIILNMTENIDCEVFRQHRGLQLLALVEEVLPRHGSDHHGDWHISLSKPSEKEQHLLMTLVGEQGVVPTQDVLSMLGDIRRSLVEIGIQNYSMTSSCQARASQVRSDYGTLFVVLVVIGAICVVIIVLGLLYNCWQRRLPKLKHVSHGEELRFVENGCHDNPTLDVASDSQSEMQEKQPSLNGGGAVNGPGGWSALMGGKRDPEDSDVFEEDTHL
SIO_010081: PODXL2
subclass of: SO_0000673
so part of: PODXL2
location: complement(join(1761014..1761226,1761852..1762031,1764380..1764441,1765016..1765172,1775239..1775313,1776139..1776890,1800314..1800592,1806845..1806914))
location: region:1761014-1806914:-1
so has part: feature:1806845-1806914:-1:exon
so has part: feature:1800314-1800592:-1:exon
so has part: feature:1776139-1776890:-1:exon
so has part: feature:1775239-1775313:-1:exon
so has part: feature:1765016-1765172:-1:exon
so has part: feature:1764380-1764441:-1:exon
so has part: feature:1761852-1762031:-1:exon
so has part: feature:1761014-1761226:-1:exon

XP_032943688.1
type: Protein
SIO_000068: ncbiprotein

position:1761014:-1
position: 1761014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1806914:-1
position: 1806914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1806845-1806914:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1800314-1800592:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1776139-1776890:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1775239-1775313:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1765016-1765172:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1764380-1764441:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1761852-1762031:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1761014-1761226:-1:exon

PODXL2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: PODXL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: podocalyxin-like protein 2 isoform X4
translation: MGWLLRDVRLLPLLPPLLLLLAGSECAPTEGRAAAWTGGLEAVRGVSLGTFAAGSDEPGPEGLTSTSLLDLLLPTGLDPLGSEEPSEPMGLGAGLEAPGSGFPSEESEESRILQPPQYFWEEEEELNDSSLDLGPTADYGFPDLTEKAGPIEDTSQGQKMPSLPSSLPKMNLVEPPWPMALGEEEEEEEEKEEIEKEEEEEEEELLPVNRTQEKAQTQVYDFSLTSSSQTPRAPKHRHEDSGDQASSGVEVGSNMEPSLSPPSVTPNTVTLGGLDFASQEAGGTMLPAAGHEVEFEAPQEASEKATVGTAGLEVLSLASFPQAEAPSGAATSSEDPLYPGASTALPQYPQHMELTPSSATLGQEDLSQQPQEGQSAEAQSRIPWDSTQVICKDWSNLAGKNYIILNMTENIDCIGIQNYSMTSSCQARASQVRSDYGTLFVVLVVIGAICVVIIVLGLLYNCWQRRLPKLKHVSHGEELRFVENGCHDNPTLDVASDSQSEMQEKQPSLNGGGAVNGPGGWSALMGGKRDPEDSDVFEEDTHL
SIO_010081: PODXL2
subclass of: SO_0000673
so part of: PODXL2
location: complement(join(1761014..1761226,1761852..1762031,1775239..1775313,1776139..1776890,1800314..1800592,1806782..1806914))
location: region:1761014-1806914:-1
so has part: feature:1806782-1806914:-1:exon
so has part: feature:1800314-1800592:-1:exon
so has part: feature:1776139-1776890:-1:exon
so has part: feature:1775239-1775313:-1:exon
so has part: feature:1761852-1762031:-1:exon
so has part: feature:1761014-1761226:-1:exon

XP_032943689.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1806782-1806914:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1800314-1800592:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1776139-1776890:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1775239-1775313:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1761852-1762031:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1761014-1761226:-1:exon

PODXL2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: PODXL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: podocalyxin-like protein 2 isoform X2
translation: MGWLLRDVRLLPLLPPLLLLLAGSECAPTEGRAAAWTGGLEAVRGVSLGTFAAGSDEPGPEGLTSTSLLDLLLPTGLDPLGSEEPSEPMGLGAGLEAPGSGFPSEESEESRILQPPQYFWEEEEELNDSSLDLGPTADYGFPDLTEKAGPIEDTSQGQKMPSLPSSLPKMNLVEPPWPMALGEEEEEEEEKEEIEKEEEEEEEELLPVNRTQEKAQTQVYDFSLTSSSQTPRAPKHRHEDSGDQASSGVEVGSNMEPSLSPPSVTPNTVTLGGLDFASQEAGGTMLPAAGHEVEFEAPQEASEKATVGTAGLEVLSLASFPQAEAPSGAATSSEDPLYPGASTALPQYPQHMELTPSSATLGQEDLSQQPQEGQSAEAQSRIPWDSTQVICKDWSNLAGKNYIILNMTENIDCEVFRQHRGLQLLALVEEVLPRHGSDHHGDWHISLSKPSEKEQHLLMTLVGVVPTQDVLSMLGDIRRSLVEIGIQNYSMTSSCQARASQVRSDYGTLFVVLVVIGAICVVIIVLGLLYNCWQRRLPKLKHVSHGEELRFVENGCHDNPTLDVASDSQSEMQEKQPSLNGGGAVNGPGGWSALMGGKRDPEDSDVFEEDTHL
SIO_010081: PODXL2
subclass of: SO_0000673
so part of: PODXL2
location: complement(join(1761014..1761226,1761852..1762031,1764380..1764441,1765025..1765172,1775239..1775313,1776139..1776890,1800314..1800592,1806782..1806914))
location: region:1761014-1806914:-1
so has part: feature:1806782-1806914:-1:exon
so has part: feature:1800314-1800592:-1:exon
so has part: feature:1776139-1776890:-1:exon
so has part: feature:1775239-1775313:-1:exon
so has part: feature:1765025-1765172:-1:exon
so has part: feature:1764380-1764441:-1:exon
so has part: feature:1761852-1762031:-1:exon
so has part: feature:1761014-1761226:-1:exon

XP_032943687.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1806782-1806914:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1800314-1800592:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1776139-1776890:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1775239-1775313:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1765025-1765172:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1764380-1764441:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1761852-1762031:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1761014-1761226:-1:exon

PODXL2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: PODXL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: podocalyxin-like protein 2 isoform X1
translation: MGWLLRDVRLLPLLPPLLLLLAGSECAPTEGRAAAWTGGLEAVRGVSLGTFAAGSDEPGPEGLTSTSLLDLLLPTGLDPLGSEEPSEPMGLGAGLEAPGSGFPSEESEESRILQPPQYFWEEEEELNDSSLDLGPTADYGFPDLTEKAGPIEDTSQGQKMPSLPSSLPKMNLVEPPWPMALGEEEEEEEEKEEIEKEEEEEEEELLPVNRTQEKAQTQVYDFSLTSSSQTPRAPKHRHEDSGDQASSGVEVGSNMEPSLSPPSVTPNTVTLGGLDFASQEAGGTMLPAAGHEVEFEAPQEASEKATVGTAGLEVLSLASFPQAEAPSGAATSSEDPLYPGASTALPQYPQHMELTPSSATLGQEDLSQQPQEGQSAEAQSRIPWDSTQVICKDWSNLAGKNYIILNMTENIDCEVFRQHRGLQLLALVEEVLPRHGSDHHGDWHISLSKPSEKEQHLLMTLVGEQGVVPTQDVLSMLGDIRRSLVEIGIQNYSMTSSCQARASQVRSDYGTLFVVLVVIGAICVVIIVLGLLYNCWQRRLPKLKHVSHGEELRFVENGCHDNPTLDVASDSQSEMQEKQPSLNGGGAVNGPGGWSALMGGKRDPEDSDVFEEDTHL
SIO_010081: PODXL2
subclass of: SO_0000673
so part of: PODXL2
location: complement(join(1761014..1761226,1761852..1762031,1764380..1764441,1765016..1765172,1775239..1775313,1776139..1776890,1800314..1800592,1806782..1806914))
location: region:1761014-1806914:-1
so has part: feature:1806782-1806914:-1:exon
so has part: feature:1800314-1800592:-1:exon
so has part: feature:1776139-1776890:-1:exon
so has part: feature:1775239-1775313:-1:exon
so has part: feature:1765016-1765172:-1:exon
so has part: feature:1764380-1764441:-1:exon
so has part: feature:1761852-1762031:-1:exon
so has part: feature:1761014-1761226:-1:exon

XP_032943686.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1806782-1806914:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1800314-1800592:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1776139-1776890:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1775239-1775313:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1765016-1765172:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1764380-1764441:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1761852-1762031:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1761014-1761226:-1:exon

MCM2
type: Gene
subclass of: SO_0000704
RO_0002162: 59479
gene: MCM2
note: minichromosome maintenance complex component 2; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1822478..1842908)
location: region:1822478-1842908:-1
so has part: feature:1822478-1842908:-1:exon
subclass of: SO_0000010

117011843
type: Gene
SIO_000068: ncbigene

position:1822478:-1
position: 1822478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1842908:-1
position: 1842908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1822478-1842908:-1:exon

MCM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: MCM2
product: minichromosome maintenance complex component 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 mRNAs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_033087564.1
SIO_010081: MCM2
subclass of: SO_0000673
so part of: MCM2
location: complement(join(1822478..1823319,1823772..1823927,1824127..1824309,1825096..1825341,1826254..1826366,1826962..1827088,1827202..1827452,1828381..1828474,1830753..1830944,1831277..1831411,1833036..1833243,1833517..1833736,1837517..1837774,1837887..1838062,1841712..1841944,1842767..1842908))
location: region:1822478-1842908:-1
so has part: feature:1842767-1842908:-1:exon
so has part: feature:1841712-1841944:-1:exon
so has part: feature:1837887-1838062:-1:exon
so has part: feature:1837517-1837774:-1:exon
so has part: feature:1833517-1833736:-1:exon
so has part: feature:1833036-1833243:-1:exon
so has part: feature:1831277-1831411:-1:exon
so has part: feature:1830753-1830944:-1:exon
so has part: feature:1828381-1828474:-1:exon
so has part: feature:1827202-1827452:-1:exon
so has part: feature:1826962-1827088:-1:exon
so has part: feature:1826254-1826366:-1:exon
so has part: feature:1825096-1825341:-1:exon
so has part: feature:1824127-1824309:-1:exon
so has part: feature:1823772-1823927:-1:exon
so has part: feature:1822478-1823319:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1842767-1842908:-1:exon

position:1842767:-1
position: 1842767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1841712-1841944:-1:exon

position:1841712:-1
position: 1841712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1841944:-1
position: 1841944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1837887-1838062:-1:exon

position:1837887:-1
position: 1837887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1838062:-1
position: 1838062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1837517-1837774:-1:exon

position:1837517:-1
position: 1837517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1837774:-1
position: 1837774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1833517-1833736:-1:exon

position:1833517:-1
position: 1833517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1833736:-1
position: 1833736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1833036-1833243:-1:exon

position:1833036:-1
position: 1833036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1833243:-1
position: 1833243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1831277-1831411:-1:exon

position:1831277:-1
position: 1831277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1831411:-1
position: 1831411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1830753-1830944:-1:exon

position:1830753:-1
position: 1830753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1830944:-1
position: 1830944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1828381-1828474:-1:exon

position:1828381:-1
position: 1828381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1828474:-1
position: 1828474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1827202-1827452:-1:exon

position:1827202:-1
position: 1827202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1827452:-1
position: 1827452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1826962-1827088:-1:exon

position:1826962:-1
position: 1826962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1827088:-1
position: 1827088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1826254-1826366:-1:exon

position:1826254:-1
position: 1826254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1826366:-1
position: 1826366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1825096-1825341:-1:exon

position:1825096:-1
position: 1825096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1825341:-1
position: 1825341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1824127-1824309:-1:exon

position:1824127:-1
position: 1824127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1824309:-1
position: 1824309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1823772-1823927:-1:exon

position:1823772:-1
position: 1823772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1823927:-1
position: 1823927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1822478-1823319:-1:exon

position:1823319:-1
position: 1823319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MCM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: MCM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA replication licensing factor MCM2
translation: MAESSESFTTASSPARRRRSNDPLTSSPGRSSRRTDALTSSPGRDLPPFEDESEGLLGTEGPVEEEEEDGEELIGDGMERDYRPIPGLDTYEADGLALDDEDVEELTASQREAAERAMQQRDREAGRGLGRMRRGLLYDSDEDEERPARKRRQVERATEDSEEDEEMIESIENLEDLKGHSVREWVSMAGPRLEIHHRFKNFLRTHVDCHGHNVFKERISDMCKENRESLVVNYEDLAAREHVLAYFLPEAPAELLHIFDEAALEVVLAMYPKYDRITSRIHVRISHLPLVEELRSLRQLHLNQLIRTSGVVTSCTGVLPQLSMVKYNCNKCSFVLGPFCQSQNQEVKPGSCPECQSAGPFEVNMEETIYQNYQRIRIQESPGKVAAGRLPRSKDAILLTDLVDSCKPGDEIELTGIYHNNYDGSLNTANGFPVFATVILANHVAKKDNKVAVGELTDEDVKMITSLSKDQQIGEKIFASIAPSIYGHEDIKRGLALALFGGEPKNPGGKHKVRGDINVLLCGDPGTAKSQFLKYIEKVSSRAIFTTGQGASAVGLTAYVQRHPVSREWTLEAGALVLADRGVCLIDEFDKMNDQDRTSIHEAMEQQSISISKAGIVTSLQARCTVIAAANPIGGRYDPSLTFSENVDLTEPIVSRFDILCVVRDTVDPVQDEMLARFVVGSHIRHHPSNKEEGGLGGTPEPAMPNTYGVEPLPQEVLKKYVIYAKEKVHPKLNQMDQDKVAKMYSDLRKESMATGSIPITVRHIESMIRMAEAHARIHLRDYVIEDDVNMAIRVMLESFIDTQKFSIMRSMRKTFARYLSFRRDNNELLLFILKQLVAEQVTYQRNRFGAQQDTIEVPEKDLVDKARQINIHNLSAFYDSELFRMNKFSHDLKRKMILQQF
SIO_010081: MCM2
subclass of: SO_0000673
so part of: MCM2
location: complement(join(1823209..1823319,1823772..1823927,1824127..1824309,1825096..1825341,1826254..1826366,1826962..1827088,1827202..1827452,1828381..1828474,1830753..1830944,1831277..1831411,1833036..1833243,1833517..1833736,1837517..1837774,1837887..1838062,1841712..1841944,1842767..1842772))
location: region:1823209-1842772:-1
so has part: feature:1842767-1842772:-1:exon
so has part: feature:1841712-1841944:-1:exon
so has part: feature:1837887-1838062:-1:exon
so has part: feature:1837517-1837774:-1:exon
so has part: feature:1833517-1833736:-1:exon
so has part: feature:1833036-1833243:-1:exon
so has part: feature:1831277-1831411:-1:exon
so has part: feature:1830753-1830944:-1:exon
so has part: feature:1828381-1828474:-1:exon
so has part: feature:1827202-1827452:-1:exon
so has part: feature:1826962-1827088:-1:exon
so has part: feature:1826254-1826366:-1:exon
so has part: feature:1825096-1825341:-1:exon
so has part: feature:1824127-1824309:-1:exon
so has part: feature:1823772-1823927:-1:exon
so has part: feature:1823209-1823319:-1:exon

XP_032943455.1
type: Protein
SIO_000068: ncbiprotein

position:1823209:-1
position: 1823209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1842772:-1
position: 1842772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1842767-1842772:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1841712-1841944:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1837887-1838062:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1837517-1837774:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1833517-1833736:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1833036-1833243:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1831277-1831411:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1830753-1830944:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1828381-1828474:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1827202-1827452:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1826962-1827088:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1826254-1826366:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1825096-1825341:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1824127-1824309:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1823772-1823927:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1823209-1823319:-1:exon

TPRA1
type: Gene
subclass of: SO_0000704
RO_0002162: 59479
gene: TPRA1
note: transmembrane protein adipocyte associated 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1858902..1875155
location: region:1858902-1875155:1
so has part: feature:1858902-1875155:1:exon
subclass of: SO_0000010

117011759
type: Gene
SIO_000068: ncbigene

position:1858902:1
position: 1858902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1875155:1
position: 1875155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1858902-1875155:1:exon

TPRA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: TPRA1
product: transmembrane protein adipocyte associated 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_033087434.1
SIO_010081: TPRA1
subclass of: SO_0000673
so part of: TPRA1
location: join(1858902..1859041,1866582..1866723,1866918..1867050,1869623..1869709,1869802..1869874,1869988..1870067,1870632..1870742,1870882..1870942,1871165..1871240,1871321..1871401,1872769..1875155)
location: region:1858902-1875155:1
so has part: feature:1858902-1859041:1:exon
so has part: feature:1866582-1866723:1:exon
so has part: feature:1866918-1867050:1:exon
so has part: feature:1869623-1869709:1:exon
so has part: feature:1869802-1869874:1:exon
so has part: feature:1869988-1870067:1:exon
so has part: feature:1870632-1870742:1:exon
so has part: feature:1870882-1870942:1:exon
so has part: feature:1871165-1871240:1:exon
so has part: feature:1871321-1871401:1:exon
so has part: feature:1872769-1875155:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1858902-1859041:1:exon

position:1859041:1
position: 1859041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1866582-1866723:1:exon

position:1866582:1
position: 1866582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1866723:1
position: 1866723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1866918-1867050:1:exon

position:1866918:1
position: 1866918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1867050:1
position: 1867050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1869623-1869709:1:exon

position:1869623:1
position: 1869623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1869709:1
position: 1869709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1869802-1869874:1:exon

position:1869802:1
position: 1869802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1869874:1
position: 1869874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1869988-1870067:1:exon

position:1869988:1
position: 1869988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1870067:1
position: 1870067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1870632-1870742:1:exon

position:1870632:1
position: 1870632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1870742:1
position: 1870742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1870882-1870942:1:exon

position:1870882:1
position: 1870882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1870942:1
position: 1870942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1871165-1871240:1:exon

position:1871165:1
position: 1871165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1871240:1
position: 1871240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1871321-1871401:1:exon

position:1871321:1
position: 1871321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1871401:1
position: 1871401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1872769-1875155:1:exon

position:1872769:1
position: 1872769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TPRA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: TPRA1
product: transmembrane protein adipocyte associated 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_033087433.1
SIO_010081: TPRA1
subclass of: SO_0000673
so part of: TPRA1
location: join(1858905..1859041,1866582..1866723,1866918..1867050,1869623..1869709,1869802..1869874,1869988..1870067,1870632..1870742,1870882..1870942,1871138..1871240,1871321..1871401,1872769..1875153)
location: region:1858905-1875153:1
so has part: feature:1858905-1859041:1:exon
so has part: feature:1866582-1866723:1:exon
so has part: feature:1866918-1867050:1:exon
so has part: feature:1869623-1869709:1:exon
so has part: feature:1869802-1869874:1:exon
so has part: feature:1869988-1870067:1:exon
so has part: feature:1870632-1870742:1:exon
so has part: feature:1870882-1870942:1:exon
so has part: feature:1871138-1871240:1:exon
so has part: feature:1871321-1871401:1:exon
so has part: feature:1872769-1875153:1:exon

position:1858905:1
position: 1858905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1875153:1
position: 1875153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1858905-1859041:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1866582-1866723:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1866918-1867050:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1869623-1869709:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1869802-1869874:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1869988-1870067:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1870632-1870742:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1870882-1870942:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1871138-1871240:1:exon

position:1871138:1
position: 1871138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1871321-1871401:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1872769-1875153:1:exon

TPRA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: TPRA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein adipocyte-associated 1 isoform X1
translation: MLLPGPSGPSLPREEERRLQRAGLAAGGMDTLQEAPWANGSTALSPTLVPNISVPHRCLLLLYEDIGTSRVRYWDLLLLIPNVLFFIFLLWKLPFARAKICITSSPIFITFYILVFVVALVGIARAVVSMTVSTSDAATVADKILWEITRFFLLAIELSVVILGLAFGHLESKSSIKRVLAITTVLSLAYSVTQGTLEIMYPDTHLSAEDFNIYGHGGRQFWLVSSCFFFLVYSLVVVLPKTPLKERISLPSRRSFYVYAGILALLNLLQGLGSALLCMDIIEGLCCVDATTFLYFSFFAPLIYVAFLRGFFGSEPKILFSYKCQVDETEEPDMHLPQPYAVARREGPETVGAASTQFDSAGGVAYLDDIASMPCHTGSINSTDSERWKALSA
SIO_010081: TPRA1
subclass of: SO_0000673
so part of: TPRA1
location: join(1858975..1859041,1866582..1866723,1866918..1867050,1869623..1869709,1869802..1869874,1869988..1870067,1870632..1870742,1870882..1870942,1871138..1871240,1871321..1871401,1872769..1873012)
location: region:1858975-1873012:1
so has part: feature:1858975-1859041:1:exon
so has part: feature:1866582-1866723:1:exon
so has part: feature:1866918-1867050:1:exon
so has part: feature:1869623-1869709:1:exon
so has part: feature:1869802-1869874:1:exon
so has part: feature:1869988-1870067:1:exon
so has part: feature:1870632-1870742:1:exon
so has part: feature:1870882-1870942:1:exon
so has part: feature:1871138-1871240:1:exon
so has part: feature:1871321-1871401:1:exon
so has part: feature:1872769-1873012:1:exon

XP_032943324.1
type: Protein
SIO_000068: ncbiprotein

position:1858975:1
position: 1858975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1873012:1
position: 1873012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1858975-1859041:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1866582-1866723:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1866918-1867050:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1869623-1869709:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1869802-1869874:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1869988-1870067:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1870632-1870742:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1870882-1870942:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1871138-1871240:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1871321-1871401:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1872769-1873012:1:exon

TPRA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: TPRA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein adipocyte-associated 1 isoform X2
translation: MLLPGPSGPSLPREEERRLQRAGLAAGGMDTLQEAPWANGSTALSPTLVPNISVPHRCLLLLYEDIGTSRVRYWDLLLLIPNVLFFIFLLWKLPFARAKICITSSPIFITFYILVFVVALVGIARAVVSMTVSTSDAATVADKILWEITRFFLLAIELSVVILGLAFGHLESKSSIKRVLAITTVLSLAYSVTQGTLEIMYPDTHLSAEDFNIYGHGGRQFWLVSSCFFFLVYSLVVVLPKTPLKERISLPCILALLNLLQGLGSALLCMDIIEGLCCVDATTFLYFSFFAPLIYVAFLRGFFGSEPKILFSYKCQVDETEEPDMHLPQPYAVARREGPETVGAASTQFDSAGGVAYLDDIASMPCHTGSINSTDSERWKALSA
SIO_010081: TPRA1
subclass of: SO_0000673
so part of: TPRA1
location: join(1858975..1859041,1866582..1866723,1866918..1867050,1869623..1869709,1869802..1869874,1869988..1870067,1870632..1870742,1870882..1870942,1871165..1871240,1871321..1871401,1872769..1873012)
location: region:1858975-1873012:1
so has part: feature:1858975-1859041:1:exon
so has part: feature:1866582-1866723:1:exon
so has part: feature:1866918-1867050:1:exon
so has part: feature:1869623-1869709:1:exon
so has part: feature:1869802-1869874:1:exon
so has part: feature:1869988-1870067:1:exon
so has part: feature:1870632-1870742:1:exon
so has part: feature:1870882-1870942:1:exon
so has part: feature:1871165-1871240:1:exon
so has part: feature:1871321-1871401:1:exon
so has part: feature:1872769-1873012:1:exon

XP_032943325.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1858975-1859041:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1866582-1866723:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1866918-1867050:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1869623-1869709:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1869802-1869874:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1869988-1870067:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1870632-1870742:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1870882-1870942:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1871165-1871240:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1871321-1871401:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1872769-1873012:1:exon

TPRA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: TPRA1
product: transmembrane protein adipocyte associated 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_033087436.1
SIO_010081: TPRA1
subclass of: SO_0000673
so part of: TPRA1
location: join(1859281..1859611,1859843..1859950,1866582..1866723,1866918..1867050,1869623..1869709,1869802..1869874,1869988..1870067,1870632..1870742,1870882..1870942,1871138..1871240,1871321..1871401,1872769..1875153)
location: region:1859281-1875153:1
so has part: feature:1859281-1859611:1:exon
so has part: feature:1859843-1859950:1:exon
so has part: feature:1866582-1866723:1:exon
so has part: feature:1866918-1867050:1:exon
so has part: feature:1869623-1869709:1:exon
so has part: feature:1869802-1869874:1:exon
so has part: feature:1869988-1870067:1:exon
so has part: feature:1870632-1870742:1:exon
so has part: feature:1870882-1870942:1:exon
so has part: feature:1871138-1871240:1:exon
so has part: feature:1871321-1871401:1:exon
so has part: feature:1872769-1875153:1:exon

position:1859281:1
position: 1859281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1859281-1859611:1:exon

position:1859611:1
position: 1859611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1859843-1859950:1:exon

position:1859843:1
position: 1859843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1859950:1
position: 1859950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1866582-1866723:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1866918-1867050:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1869623-1869709:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1869802-1869874:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1869988-1870067:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1870632-1870742:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1870882-1870942:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1871138-1871240:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1871321-1871401:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1872769-1875153:1:exon

TPRA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: TPRA1
product: transmembrane protein adipocyte associated 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_033087435.1
SIO_010081: TPRA1
subclass of: SO_0000673
so part of: TPRA1
location: join(1859283..1859611,1866582..1866723,1866918..1867050,1869623..1869709,1869802..1869874,1869988..1870067,1870632..1870742,1870882..1870942,1871138..1871240,1871321..1871401,1872769..1875152)
location: region:1859283-1875152:1
so has part: feature:1859283-1859611:1:exon
so has part: feature:1866582-1866723:1:exon
so has part: feature:1866918-1867050:1:exon
so has part: feature:1869623-1869709:1:exon
so has part: feature:1869802-1869874:1:exon
so has part: feature:1869988-1870067:1:exon
so has part: feature:1870632-1870742:1:exon
so has part: feature:1870882-1870942:1:exon
so has part: feature:1871138-1871240:1:exon
so has part: feature:1871321-1871401:1:exon
so has part: feature:1872769-1875152:1:exon

position:1859283:1
position: 1859283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1875152:1
position: 1875152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1859283-1859611:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1866582-1866723:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1866918-1867050:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1869623-1869709:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1869802-1869874:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1869988-1870067:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1870632-1870742:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1870882-1870942:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1871138-1871240:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1871321-1871401:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1872769-1875152:1:exon

TPRA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: TPRA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein adipocyte-associated 1 isoform X3
translation: MDTLQEAPWANGSTALSPTLVPNISVPHRCLLLLYEDIGTSRVRYWDLLLLIPNVLFFIFLLWKLPFARAKICITSSPIFITFYILVFVVALVGIARAVVSMTVSTSDAATVADKILWEITRFFLLAIELSVVILGLAFGHLESKSSIKRVLAITTVLSLAYSVTQGTLEIMYPDTHLSAEDFNIYGHGGRQFWLVSSCFFFLVYSLVVVLPKTPLKERISLPSRRSFYVYAGILALLNLLQGLGSALLCMDIIEGLCCVDATTFLYFSFFAPLIYVAFLRGFFGSEPKILFSYKCQVDETEEPDMHLPQPYAVARREGPETVGAASTQFDSAGGVAYLDDIASMPCHTGSINSTDSERWKALSA
SIO_010081: TPRA1
subclass of: SO_0000673
so part of: TPRA1
location: join(1866599..1866723,1866918..1867050,1869623..1869709,1869802..1869874,1869988..1870067,1870632..1870742,1870882..1870942,1871138..1871240,1871321..1871401,1872769..1873012)
location: region:1866599-1873012:1
so has part: feature:1866599-1866723:1:exon
so has part: feature:1866918-1867050:1:exon
so has part: feature:1869623-1869709:1:exon
so has part: feature:1869802-1869874:1:exon
so has part: feature:1869988-1870067:1:exon
so has part: feature:1870632-1870742:1:exon
so has part: feature:1870882-1870942:1:exon
so has part: feature:1871138-1871240:1:exon
so has part: feature:1871321-1871401:1:exon
so has part: feature:1872769-1873012:1:exon

XP_032943326.1
type: Protein
SIO_000068: ncbiprotein

position:1866599:1
position: 1866599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1866599-1866723:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1866918-1867050:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1869623-1869709:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1869802-1869874:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1869988-1870067:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1870632-1870742:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1870882-1870942:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1871138-1871240:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1871321-1871401:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1872769-1873012:1:exon

TPRA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: TPRA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein adipocyte-associated 1 isoform X3
translation: MDTLQEAPWANGSTALSPTLVPNISVPHRCLLLLYEDIGTSRVRYWDLLLLIPNVLFFIFLLWKLPFARAKICITSSPIFITFYILVFVVALVGIARAVVSMTVSTSDAATVADKILWEITRFFLLAIELSVVILGLAFGHLESKSSIKRVLAITTVLSLAYSVTQGTLEIMYPDTHLSAEDFNIYGHGGRQFWLVSSCFFFLVYSLVVVLPKTPLKERISLPSRRSFYVYAGILALLNLLQGLGSALLCMDIIEGLCCVDATTFLYFSFFAPLIYVAFLRGFFGSEPKILFSYKCQVDETEEPDMHLPQPYAVARREGPETVGAASTQFDSAGGVAYLDDIASMPCHTGSINSTDSERWKALSA
SIO_010081: TPRA1
subclass of: SO_0000673
so part of: TPRA1
location: join(1866599..1866723,1866918..1867050,1869623..1869709,1869802..1869874,1869988..1870067,1870632..1870742,1870882..1870942,1871138..1871240,1871321..1871401,1872769..1873012)
location: region:1866599-1873012:1
so has part: feature:1866599-1866723:1:exon
so has part: feature:1866918-1867050:1:exon
so has part: feature:1869623-1869709:1:exon
so has part: feature:1869802-1869874:1:exon
so has part: feature:1869988-1870067:1:exon
so has part: feature:1870632-1870742:1:exon
so has part: feature:1870882-1870942:1:exon
so has part: feature:1871138-1871240:1:exon
so has part: feature:1871321-1871401:1:exon
so has part: feature:1872769-1873012:1:exon

XP_032943327.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1866599-1866723:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1866918-1867050:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1869623-1869709:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1869802-1869874:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1869988-1870067:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1870632-1870742:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1870882-1870942:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1871138-1871240:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1871321-1871401:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1872769-1873012:1:exon

LOC117011870
type: Gene
subclass of: SO_0000704
RO_0002162: 59479
gene: LOC117011870
note: glyceraldehyde-3-phosphate dehydrogenase-like; Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(2045124..2046002)
location: region:2045124-2046002:-1
so has part: feature:2045124-2046002:-1:exon

117011870
type: Gene
SIO_000068: ncbigene

position:2045124:-1
position: 2045124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2046002:-1
position: 2046002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2045124-2046002:-1:exon

LOC117011870
type: Exon
subclass of: SO_0000147
RO_0002162: 59479
gene: LOC117011870
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins, and 23% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117011870
subclass of: SO_0000673
so part of: LOC117011870
location: complement(2045124..2046002)
location: region:2045124-2046002:-1
so has part: feature:2045124-2046002:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2045124-2046002:-1:exon

LOC117011945
type: Gene
subclass of: SO_0000704
RO_0002162: 59479
gene: LOC117011945
note: signal peptidase complex subunit 2-like; Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 2134185..2134874
location: region:2134185-2134874:1
so has part: feature:2134185-2134874:1:exon

117011945
type: Gene
SIO_000068: ncbigene

position:2134185:1
position: 2134185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2134874:1
position: 2134874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2134185-2134874:1:exon

LOC117011945
type: Exon
subclass of: SO_0000147
RO_0002162: 59479
gene: LOC117011945
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 31% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117011945
subclass of: SO_0000673
so part of: LOC117011945
location: 2134185..2134874
location: region:2134185-2134874:1
so has part: feature:2134185-2134874:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2134185-2134874:1:exon

LOC117038732
type: Gene
subclass of: SO_0000704
RO_0002162: 59479
gene: LOC117038732
note: peptidyl-prolyl cis-trans isomerase D; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2371621..2373005
location: region:2371621-2373005:1
so has part: feature:2371621-2373005:1:exon
subclass of: SO_0000010

117038732
type: Gene
SIO_000068: ncbigene

position:2371621:1
position: 2371621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2373005:1
position: 2373005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2371621-2373005:1:exon

LOC117038732
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: LOC117038732
product: peptidyl-prolyl cis-trans isomerase D
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033135625.1
SIO_010081: LOC117038732
subclass of: SO_0000673
so part of: LOC117038732
location: 2371621..2373005
location: region:2371621-2373005:1
so has part: feature:2371621-2373005:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2371621-2373005:1:exon

LOC117038732
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: LOC117038732
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peptidyl-prolyl cis-trans isomerase D
translation: MSHPSPQAKPSNPNNPRVFFDVDIGGERVGRIVLELFADIVPKTAENFRALCTGEKGIGPTTGKPLHFKGCPFHRIIKKFMIQGGDFSNHNGTGGESIYGEKFEDEKFYYKHDKEGVLSMANAGCNTNGSQFFITTVPAPHLDGKHVVFGQVIKGMGVARILENVEVKGEKPVKLCVIAECGELKEGDDWGIFPKDGSGDSYPDFPEDADIDLKDVDKILLITEDLKNIGNTVFKSQNWEMAIKKYTKVLRYVEGSKAVIEKADTSKLQPIALSCMLNIGACKLKMSDWQGAIDSCLEALEIDPSNTKALYRRAQGWQGLKEYNEALVDLKKAQEIAPEDKAIQAELLKVKQKIKAQKDKEKAAYAKMFA
SIO_010081: LOC117038732
subclass of: SO_0000673
so part of: LOC117038732
location: 2371694..2372806
location: region:2371694-2372806:1
so has part: feature:2371694-2372806:1:exon

XP_032991516.1
type: Protein
SIO_000068: ncbiprotein

position:2371694:1
position: 2371694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2372806:1
position: 2372806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2371694-2372806:1:exon

PLXNA1
type: Gene
subclass of: SO_0000704
RO_0002162: 59479
gene: PLXNA1
note: plexin A1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2536203..2596218)
location: region:2536203-2596218:-1
so has part: feature:2536203-2596218:-1:exon
subclass of: SO_0000010

117011658
type: Gene
SIO_000068: ncbigene

position:2536203:-1
position: 2536203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2596218:-1
position: 2596218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2536203-2596218:-1:exon

PLXNA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: PLXNA1
product: plexin A1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_033087151.1
SIO_010081: PLXNA1
subclass of: SO_0000673
so part of: PLXNA1
location: complement(join(2536203..2539021,2540732..2540882,2540967..2541179,2542456..2542625,2542745..2542758,2542930..2542935,2543303..2543399,2543721..2543824,2544675..2544834,2544933..2545079,2558005..2558071,2558425..2558681,2560015..2560157,2562820..2563054,2563362..2563505,2563606..2563845,2564030..2564123,2564694..2564861,2566138..2566274,2566606..2566726,2566805..2566956,2567077..2567270,2567347..2567443,2568703..2568903,2572116..2572230,2573648..2573747,2574116..2574269,2574356..2574479,2574785..2574885,2575795..2575935,2587472..2587654,2589625..2590885,2596176..2596218))
location: region:2536203-2596218:-1
so has part: feature:2596176-2596218:-1:exon
so has part: feature:2589625-2590885:-1:exon
so has part: feature:2587472-2587654:-1:exon
so has part: feature:2575795-2575935:-1:exon
so has part: feature:2574785-2574885:-1:exon
so has part: feature:2574356-2574479:-1:exon
so has part: feature:2574116-2574269:-1:exon
so has part: feature:2573648-2573747:-1:exon
so has part: feature:2572116-2572230:-1:exon
so has part: feature:2568703-2568903:-1:exon
so has part: feature:2567347-2567443:-1:exon
so has part: feature:2567077-2567270:-1:exon
so has part: feature:2566805-2566956:-1:exon
so has part: feature:2566606-2566726:-1:exon
so has part: feature:2566138-2566274:-1:exon
so has part: feature:2564694-2564861:-1:exon
so has part: feature:2564030-2564123:-1:exon
so has part: feature:2563606-2563845:-1:exon
so has part: feature:2563362-2563505:-1:exon
so has part: feature:2562820-2563054:-1:exon
so has part: feature:2560015-2560157:-1:exon
so has part: feature:2558425-2558681:-1:exon
so has part: feature:2558005-2558071:-1:exon
so has part: feature:2544933-2545079:-1:exon
so has part: feature:2544675-2544834:-1:exon
so has part: feature:2543721-2543824:-1:exon
so has part: feature:2543303-2543399:-1:exon
so has part: feature:2542930-2542935:-1:exon
so has part: feature:2542745-2542758:-1:exon
so has part: feature:2542456-2542625:-1:exon
so has part: feature:2540967-2541179:-1:exon
so has part: feature:2540732-2540882:-1:exon
so has part: feature:2536203-2539021:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2596176-2596218:-1:exon

position:2596176:-1
position: 2596176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2589625-2590885:-1:exon

position:2589625:-1
position: 2589625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2590885:-1
position: 2590885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2587472-2587654:-1:exon

position:2587472:-1
position: 2587472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2587654:-1
position: 2587654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2575795-2575935:-1:exon

position:2575795:-1
position: 2575795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2575935:-1
position: 2575935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2574785-2574885:-1:exon

position:2574785:-1
position: 2574785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2574885:-1
position: 2574885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2574356-2574479:-1:exon

position:2574356:-1
position: 2574356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2574479:-1
position: 2574479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2574116-2574269:-1:exon

position:2574116:-1
position: 2574116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2574269:-1
position: 2574269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2573648-2573747:-1:exon

position:2573648:-1
position: 2573648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2573747:-1
position: 2573747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2572116-2572230:-1:exon

position:2572116:-1
position: 2572116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2572230:-1
position: 2572230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2568703-2568903:-1:exon

position:2568703:-1
position: 2568703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2568903:-1
position: 2568903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2567347-2567443:-1:exon

position:2567347:-1
position: 2567347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2567443:-1
position: 2567443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2567077-2567270:-1:exon

position:2567077:-1
position: 2567077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2567270:-1
position: 2567270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2566805-2566956:-1:exon

position:2566805:-1
position: 2566805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2566956:-1
position: 2566956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2566606-2566726:-1:exon

position:2566606:-1
position: 2566606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2566726:-1
position: 2566726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2566138-2566274:-1:exon

position:2566138:-1
position: 2566138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2566274:-1
position: 2566274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2564694-2564861:-1:exon

position:2564694:-1
position: 2564694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2564861:-1
position: 2564861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2564030-2564123:-1:exon

position:2564030:-1
position: 2564030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2564123:-1
position: 2564123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2563606-2563845:-1:exon

position:2563606:-1
position: 2563606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2563845:-1
position: 2563845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2563362-2563505:-1:exon

position:2563362:-1
position: 2563362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2563505:-1
position: 2563505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2562820-2563054:-1:exon

position:2562820:-1
position: 2562820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2563054:-1
position: 2563054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2560015-2560157:-1:exon

position:2560015:-1
position: 2560015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2560157:-1
position: 2560157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2558425-2558681:-1:exon

position:2558425:-1
position: 2558425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2558681:-1
position: 2558681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:2558005-2558071:-1:exon

position:2558005:-1
position: 2558005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2558071:-1
position: 2558071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:2544933-2545079:-1:exon

position:2544933:-1
position: 2544933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2545079:-1
position: 2545079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:2544675-2544834:-1:exon

position:2544675:-1
position: 2544675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2544834:-1
position: 2544834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:2543721-2543824:-1:exon

position:2543721:-1
position: 2543721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2543824:-1
position: 2543824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:2543303-2543399:-1:exon

position:2543303:-1
position: 2543303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2543399:-1
position: 2543399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:2542930-2542935:-1:exon

position:2542930:-1
position: 2542930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2542935:-1
position: 2542935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:2542745-2542758:-1:exon

position:2542745:-1
position: 2542745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2542758:-1
position: 2542758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:2542456-2542625:-1:exon

position:2542456:-1
position: 2542456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2542625:-1
position: 2542625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:2540967-2541179:-1:exon

position:2540967:-1
position: 2540967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2541179:-1
position: 2541179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:2540732-2540882:-1:exon

position:2540732:-1
position: 2540732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2540882:-1
position: 2540882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:2536203-2539021:-1:exon

position:2539021:-1
position: 2539021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PLXNA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: PLXNA1
product: plexin A1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_033087150.1
SIO_010081: PLXNA1
subclass of: SO_0000673
so part of: PLXNA1
location: complement(join(2536203..2539021,2540732..2540882,2540967..2541179,2542456..2542625,2542745..2542935,2543303..2543399,2543721..2543824,2544675..2544834,2544933..2545079,2558005..2558071,2558425..2558681,2560015..2560157,2562820..2563054,2563362..2563505,2563606..2563845,2564030..2564123,2564694..2564861,2566138..2566274,2566606..2566726,2566805..2566956,2567077..2567270,2567347..2567443,2568703..2568903,2572116..2572230,2573648..2573747,2574116..2574269,2574356..2574479,2574785..2574885,2575795..2575935,2587472..2587654,2589625..2590885,2596176..2596218))
location: region:2536203-2596218:-1
so has part: feature:2596176-2596218:-1:exon
so has part: feature:2589625-2590885:-1:exon
so has part: feature:2587472-2587654:-1:exon
so has part: feature:2575795-2575935:-1:exon
so has part: feature:2574785-2574885:-1:exon
so has part: feature:2574356-2574479:-1:exon
so has part: feature:2574116-2574269:-1:exon
so has part: feature:2573648-2573747:-1:exon
so has part: feature:2572116-2572230:-1:exon
so has part: feature:2568703-2568903:-1:exon
so has part: feature:2567347-2567443:-1:exon
so has part: feature:2567077-2567270:-1:exon
so has part: feature:2566805-2566956:-1:exon
so has part: feature:2566606-2566726:-1:exon
so has part: feature:2566138-2566274:-1:exon
so has part: feature:2564694-2564861:-1:exon
so has part: feature:2564030-2564123:-1:exon
so has part: feature:2563606-2563845:-1:exon
so has part: feature:2563362-2563505:-1:exon
so has part: feature:2562820-2563054:-1:exon
so has part: feature:2560015-2560157:-1:exon
so has part: feature:2558425-2558681:-1:exon
so has part: feature:2558005-2558071:-1:exon
so has part: feature:2544933-2545079:-1:exon
so has part: feature:2544675-2544834:-1:exon
so has part: feature:2543721-2543824:-1:exon
so has part: feature:2543303-2543399:-1:exon
so has part: feature:2542745-2542935:-1:exon
so has part: feature:2542456-2542625:-1:exon
so has part: feature:2540967-2541179:-1:exon
so has part: feature:2540732-2540882:-1:exon
so has part: feature:2536203-2539021:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2596176-2596218:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2589625-2590885:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2587472-2587654:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2575795-2575935:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2574785-2574885:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2574356-2574479:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2574116-2574269:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2573648-2573747:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2572116-2572230:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2568703-2568903:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2567347-2567443:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2567077-2567270:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2566805-2566956:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2566606-2566726:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2566138-2566274:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2564694-2564861:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2564030-2564123:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2563606-2563845:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2563362-2563505:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2562820-2563054:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2560015-2560157:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2558425-2558681:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2558005-2558071:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2544933-2545079:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2544675-2544834:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2543721-2543824:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2543303-2543399:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2542745-2542935:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2542456-2542625:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2540967-2541179:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2540732-2540882:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2536203-2539021:-1:exon

PLXNA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: PLXNA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: plexin-A1 isoform X2
translation: MHVPAGPERLGRRPRPAMPLPHPRPQVLPMLLLLVLGLVRAVAGVPKVARDPQPAFRSFASSDWGLTHLVVHEQTGEVYVGAVNRIYKLSGNLTLLRAHVTGPVEDNEKCYPPPSVQSCPHGLGSTDNVNKLLLLDYAANRLLACGSASQGICQFLRLDDLFKLGEPHHRKEHYLSSVREAGSMAGVLIAGPPGQAQAKLFVGTPIDGKSEYFPTLSSRRLMANEEDADMFSFVYQDEFVSSQLKIPSDTLSKFPAFDIYYVYSFRSEQFVYYLTLQLDTQLTSPDAAGEHFFTSKIVRLCVDDPKFYSYVEFPIGCEQAGVEYRLVQDAYLSRPGRALARQLGLADSEDVLFTVFAQGQKNRVKPPKESALCLFTLRAIKEKIKERIQSCYRGEGKLSLPWLLNKELGCINSPLQIDDDFCGQDFNQPLGGTVTIEGTPLFVDKEDGLTAVAAYDYRGRTVVFTGTRSGRIRKILVDLANPGGRPALAYESVVAQEGSPILRDLVLSPDRQYLYAMTEKQVVRVPVESCVQYTSCELCLGSRDPHCGWCVLHSICSRQDACERAEEPQRFASDLLQCVQLTVQPRNVSVTVSQVPLVLQAWNVPDLSVGVNCSFEDFTESESVLEDGRIHCHSPSAGEVAPITQGQGDQRVVKLYLKSKETGKKFASVDFVFYNCSVHQSCLSCVNGSFPCHWCKYRHVCTDDAADCAFLEGRVNVSEDCPQILPSTQIYVPVGVVKPITLAARNLPQPQSGQRGYECLFHIPGSPTRVTALRFNSSSLQCQNSSYFYEGNDISDLPVNLSVVWNNYFVIDNPQNIQAHLYKCPALRESCGLCLKADPRFECGWCVAERRCSLRPHCPDDSPAAWMHARHGGSRCADPKILKLSPETGPRQGGTRLTIMGENLGLRFEDVQLGVRVGKVLCSPMESEYISAEQIVCEIGDASTVRAHDALVEVCVRDCSPRFRALSPKRFTFVTPTFYRVSPARGPLSGGTWIGIEGSHLNAGSDVAVSIGGRPCSFSWRNSREIRCLTPPGQIPGSAPIVININRAQLTNPEVKYNYTEDPTILKIDPEWSINSGGTLLTVTGTNLATVREPRIRAKYGGVERENSCLVYNDTTMVCRAPSVDNPTRSPPELGERPDELGFVMDDVRALLVLNASSFLYFPDPVLEPLSPTGLLELKPSSPLILKGRNLLPPAPGNSRLNYTVLIGSTPCALTVSETQLLCESPNLTGQHKVTVRAGGFEFSPGMLQVYSDSLLTLPAIVGIGGGGGLLLLVIVAVLIAYKRKSRDADRTLKRLQLQMDNLESRVALECKEAFAELQTDIHELTSDLDGAGIPFLDYRTYAMRVLFPGIEDHPVLKEMEVQANVEKSLTLFGQLLTKKHFLLTFIRTLEAQRSFSMRDRGNVASLIMTALQGEMEYATGVLKQLLSDLIEKNLESKNHPKLLLRRTESVAEKMLTNWFTFLLYKFLKECAGEPLFMLYCAIKQQMEKGPIDAITGEARYSLSEDKLIRQQIDYKTLTLNCVNPENENAPEVPVKGLNCDTVTQVKEKLLDAVYKGVPYSQRPKAGDMDLEWRQGRMARIILQDEDVTTKIDNDWKRLNTLAHYQVTDGSSVALVPKQTSAYNISNSSTFTKSLSRYESMLATKGTLQKFVDDLFETIFSTAHRGSALPLAIKYMFDFLDEQADQHQIHDSDVRHTWKSNCLPLRFWVNVIKNPQFVFDIHKSSITDACLSVVAQTFMDSCSTSEHKLGKDSPSNKLLYAKDIPNYKSWVERYYADIAKMPAISDQDMSAYLAEQSRLHLSQFNSMSALHEIYSYITKYKDEILTALEKDEQARRQRLRSKLEQVVDTMALSS
SIO_010081: PLXNA1
subclass of: SO_0000673
so part of: PLXNA1
location: complement(join(2538926..2539021,2540732..2540882,2540967..2541179,2542456..2542625,2542745..2542758,2542930..2542935,2543303..2543399,2543721..2543824,2544675..2544834,2544933..2545079,2558005..2558071,2558425..2558681,2560015..2560157,2562820..2563054,2563362..2563505,2563606..2563845,2564030..2564123,2564694..2564861,2566138..2566274,2566606..2566726,2566805..2566956,2567077..2567270,2567347..2567443,2568703..2568903,2572116..2572230,2573648..2573747,2574116..2574269,2574356..2574479,2574785..2574885,2575795..2575935,2587472..2587654,2589625..2590863))
location: region:2538926-2590863:-1
so has part: feature:2589625-2590863:-1:exon
so has part: feature:2587472-2587654:-1:exon
so has part: feature:2575795-2575935:-1:exon
so has part: feature:2574785-2574885:-1:exon
so has part: feature:2574356-2574479:-1:exon
so has part: feature:2574116-2574269:-1:exon
so has part: feature:2573648-2573747:-1:exon
so has part: feature:2572116-2572230:-1:exon
so has part: feature:2568703-2568903:-1:exon
so has part: feature:2567347-2567443:-1:exon
so has part: feature:2567077-2567270:-1:exon
so has part: feature:2566805-2566956:-1:exon
so has part: feature:2566606-2566726:-1:exon
so has part: feature:2566138-2566274:-1:exon
so has part: feature:2564694-2564861:-1:exon
so has part: feature:2564030-2564123:-1:exon
so has part: feature:2563606-2563845:-1:exon
so has part: feature:2563362-2563505:-1:exon
so has part: feature:2562820-2563054:-1:exon
so has part: feature:2560015-2560157:-1:exon
so has part: feature:2558425-2558681:-1:exon
so has part: feature:2558005-2558071:-1:exon
so has part: feature:2544933-2545079:-1:exon
so has part: feature:2544675-2544834:-1:exon
so has part: feature:2543721-2543824:-1:exon
so has part: feature:2543303-2543399:-1:exon
so has part: feature:2542930-2542935:-1:exon
so has part: feature:2542745-2542758:-1:exon
so has part: feature:2542456-2542625:-1:exon
so has part: feature:2540967-2541179:-1:exon
so has part: feature:2540732-2540882:-1:exon
so has part: feature:2538926-2539021:-1:exon

XP_032943042.1
type: Protein
SIO_000068: ncbiprotein

position:2538926:-1
position: 2538926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2590863:-1
position: 2590863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2589625-2590863:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2587472-2587654:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2575795-2575935:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2574785-2574885:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2574356-2574479:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2574116-2574269:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2573648-2573747:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2572116-2572230:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2568703-2568903:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2567347-2567443:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2567077-2567270:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2566805-2566956:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2566606-2566726:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2566138-2566274:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2564694-2564861:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2564030-2564123:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2563606-2563845:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2563362-2563505:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2562820-2563054:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2560015-2560157:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2558425-2558681:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2558005-2558071:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2544933-2545079:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2544675-2544834:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2543721-2543824:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2543303-2543399:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2542930-2542935:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2542745-2542758:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2542456-2542625:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2540967-2541179:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2540732-2540882:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2538926-2539021:-1:exon

PLXNA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: PLXNA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: plexin-A1 isoform X1
translation: MHVPAGPERLGRRPRPAMPLPHPRPQVLPMLLLLVLGLVRAVAGVPKVARDPQPAFRSFASSDWGLTHLVVHEQTGEVYVGAVNRIYKLSGNLTLLRAHVTGPVEDNEKCYPPPSVQSCPHGLGSTDNVNKLLLLDYAANRLLACGSASQGICQFLRLDDLFKLGEPHHRKEHYLSSVREAGSMAGVLIAGPPGQAQAKLFVGTPIDGKSEYFPTLSSRRLMANEEDADMFSFVYQDEFVSSQLKIPSDTLSKFPAFDIYYVYSFRSEQFVYYLTLQLDTQLTSPDAAGEHFFTSKIVRLCVDDPKFYSYVEFPIGCEQAGVEYRLVQDAYLSRPGRALARQLGLADSEDVLFTVFAQGQKNRVKPPKESALCLFTLRAIKEKIKERIQSCYRGEGKLSLPWLLNKELGCINSPLQIDDDFCGQDFNQPLGGTVTIEGTPLFVDKEDGLTAVAAYDYRGRTVVFTGTRSGRIRKILVDLANPGGRPALAYESVVAQEGSPILRDLVLSPDRQYLYAMTEKQVVRVPVESCVQYTSCELCLGSRDPHCGWCVLHSICSRQDACERAEEPQRFASDLLQCVQLTVQPRNVSVTVSQVPLVLQAWNVPDLSVGVNCSFEDFTESESVLEDGRIHCHSPSAGEVAPITQGQGDQRVVKLYLKSKETGKKFASVDFVFYNCSVHQSCLSCVNGSFPCHWCKYRHVCTDDAADCAFLEGRVNVSEDCPQILPSTQIYVPVGVVKPITLAARNLPQPQSGQRGYECLFHIPGSPTRVTALRFNSSSLQCQNSSYFYEGNDISDLPVNLSVVWNNYFVIDNPQNIQAHLYKCPALRESCGLCLKADPRFECGWCVAERRCSLRPHCPDDSPAAWMHARHGGSRCADPKILKLSPETGPRQGGTRLTIMGENLGLRFEDVQLGVRVGKVLCSPMESEYISAEQIVCEIGDASTVRAHDALVEVCVRDCSPRFRALSPKRFTFVTPTFYRVSPARGPLSGGTWIGIEGSHLNAGSDVAVSIGGRPCSFSWRNSREIRCLTPPGQIPGSAPIVININRAQLTNPEVKYNYTEDPTILKIDPEWSINSGGTLLTVTGTNLATVREPRIRAKYGGVERENSCLVYNDTTMVCRAPSVDNPTRSPPELGERPDELGFVMDDVRALLVLNASSFLYFPDPVLEPLSPTGLLELKPSSPLILKGRNLLPPAPGNSRLNYTVLIGSTPCALTVSETQLLCESPNLTGQHKVTVRAGGFEFSPGMLQVYSDSLLTLPAIVGIGGGGGLLLLVIVAVLIAYKRKSRDADRTLKRLQLQMDNLESRVALECKEAFAELQTDIHELTSDLDGAGIPFLDYRTYAMRVLFPGIEDHPVLKEMEVQANVEKSLTLFGQLLTKKHFLLTFIRTLEAQRSFSMRDRGNVASLIMTALQGEMEYATGVLKQLLSDLIEKNLESKNHPKLLLRRTESVAEKMLTNWFTFLLYKFLKECAGEPLFMLYCAIKQQMEKGPIDAITGEARYSLSEDKLIRQQIDYKTLTLNCVNPENENAPEVPVKGLNCDTVTQVKEKLLDAVYKGVPYSQRPKAGDMDLEWRQGRMARIILQDEDVTTKIDNDWKRLNTLAHYQVTDGSSVALVPKQTSAYNISNSSTFTKSLSRYESMLRTASSPDSLRSRTPMITPDLESGTKLWHLVKNHDHLDQREGDRGSKMVSEIYLTRLLATKGTLQKFVDDLFETIFSTAHRGSALPLAIKYMFDFLDEQADQHQIHDSDVRHTWKSNCLPLRFWVNVIKNPQFVFDIHKSSITDACLSVVAQTFMDSCSTSEHKLGKDSPSNKLLYAKDIPNYKSWVERYYADIAKMPAISDQDMSAYLAEQSRLHLSQFNSMSALHEIYSYITKYKDEILTALEKDEQARRQRLRSKLEQVVDTMALSS
SIO_010081: PLXNA1
subclass of: SO_0000673
so part of: PLXNA1
location: complement(join(2538926..2539021,2540732..2540882,2540967..2541179,2542456..2542625,2542745..2542935,2543303..2543399,2543721..2543824,2544675..2544834,2544933..2545079,2558005..2558071,2558425..2558681,2560015..2560157,2562820..2563054,2563362..2563505,2563606..2563845,2564030..2564123,2564694..2564861,2566138..2566274,2566606..2566726,2566805..2566956,2567077..2567270,2567347..2567443,2568703..2568903,2572116..2572230,2573648..2573747,2574116..2574269,2574356..2574479,2574785..2574885,2575795..2575935,2587472..2587654,2589625..2590863))
location: region:2538926-2590863:-1
so has part: feature:2589625-2590863:-1:exon
so has part: feature:2587472-2587654:-1:exon
so has part: feature:2575795-2575935:-1:exon
so has part: feature:2574785-2574885:-1:exon
so has part: feature:2574356-2574479:-1:exon
so has part: feature:2574116-2574269:-1:exon
so has part: feature:2573648-2573747:-1:exon
so has part: feature:2572116-2572230:-1:exon
so has part: feature:2568703-2568903:-1:exon
so has part: feature:2567347-2567443:-1:exon
so has part: feature:2567077-2567270:-1:exon
so has part: feature:2566805-2566956:-1:exon
so has part: feature:2566606-2566726:-1:exon
so has part: feature:2566138-2566274:-1:exon
so has part: feature:2564694-2564861:-1:exon
so has part: feature:2564030-2564123:-1:exon
so has part: feature:2563606-2563845:-1:exon
so has part: feature:2563362-2563505:-1:exon
so has part: feature:2562820-2563054:-1:exon
so has part: feature:2560015-2560157:-1:exon
so has part: feature:2558425-2558681:-1:exon
so has part: feature:2558005-2558071:-1:exon
so has part: feature:2544933-2545079:-1:exon
so has part: feature:2544675-2544834:-1:exon
so has part: feature:2543721-2543824:-1:exon
so has part: feature:2543303-2543399:-1:exon
so has part: feature:2542745-2542935:-1:exon
so has part: feature:2542456-2542625:-1:exon
so has part: feature:2540967-2541179:-1:exon
so has part: feature:2540732-2540882:-1:exon
so has part: feature:2538926-2539021:-1:exon

XP_032943041.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2589625-2590863:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2587472-2587654:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2575795-2575935:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2574785-2574885:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2574356-2574479:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2574116-2574269:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2573648-2573747:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2572116-2572230:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2568703-2568903:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2567347-2567443:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2567077-2567270:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2566805-2566956:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2566606-2566726:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2566138-2566274:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2564694-2564861:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2564030-2564123:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2563606-2563845:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2563362-2563505:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2562820-2563054:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2560015-2560157:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2558425-2558681:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2558005-2558071:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2544933-2545079:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2544675-2544834:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2543721-2543824:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2543303-2543399:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2542745-2542935:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2542456-2542625:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2540967-2541179:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2540732-2540882:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2538926-2539021:-1:exon

LOC117011659
type: Gene
subclass of: SO_0000704
RO_0002162: 59479
gene: LOC117011659
note: uncharacterized LOC117011659; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2596735..2598958
location: region:2596735-2598958:1
so has part: feature:2596735-2598958:1:exon
subclass of: SO_0000011

117011659
type: Gene
SIO_000068: ncbigene

position:2596735:1
position: 2596735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2598958:1
position: 2598958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2596735-2598958:1:exon

LOC117011659
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59479
nc RNA class: lncRNA
gene: LOC117011659
product: uncharacterized LOC117011659
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XR_004421049.1
SIO_010081: LOC117011659
subclass of: SO_0000673
so part of: LOC117011659
location: join(2596735..2597328,2597563..2597694,2598751..2598958)
location: region:2596735-2598958:1
so has part: feature:2596735-2597328:1:exon
so has part: feature:2597563-2597694:1:exon
so has part: feature:2598751-2598958:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2596735-2597328:1:exon

position:2597328:1
position: 2597328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2597563-2597694:1:exon

position:2597563:1
position: 2597563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2597694:1
position: 2597694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2598751-2598958:1:exon

position:2598751:1
position: 2598751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CHCHD6
type: Gene
subclass of: SO_0000704
RO_0002162: 59479
gene: CHCHD6
note: coiled-coil-helix-coiled-coil-helix domain containing 6; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2614081..2939809)
location: region:2614081-2939809:-1
so has part: feature:2614081-2939809:-1:exon
subclass of: SO_0000010

117038740
type: Gene
SIO_000068: ncbigene

position:2614081:-1
position: 2614081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2939809:-1
position: 2939809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2614081-2939809:-1:exon

CHCHD6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: CHCHD6
product: coiled-coil-helix-coiled-coil-helix domain containing 6, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_033135641.1
SIO_010081: CHCHD6
subclass of: SO_0000673
so part of: CHCHD6
location: complement(join(2614081..2614294,2616644..2616779,2664299..2664369,2899189..2899333,2901220..2901289,2904909..2905029,2939638..2939809))
location: region:2614081-2939809:-1
so has part: feature:2939638-2939809:-1:exon
so has part: feature:2904909-2905029:-1:exon
so has part: feature:2901220-2901289:-1:exon
so has part: feature:2899189-2899333:-1:exon
so has part: feature:2664299-2664369:-1:exon
so has part: feature:2616644-2616779:-1:exon
so has part: feature:2614081-2614294:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2939638-2939809:-1:exon

position:2939638:-1
position: 2939638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2904909-2905029:-1:exon

position:2904909:-1
position: 2904909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2905029:-1
position: 2905029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2901220-2901289:-1:exon

position:2901220:-1
position: 2901220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2901289:-1
position: 2901289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2899189-2899333:-1:exon

position:2899189:-1
position: 2899189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2899333:-1
position: 2899333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2664299-2664369:-1:exon

position:2664299:-1
position: 2664299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2664369:-1
position: 2664369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2616644-2616779:-1:exon

position:2616644:-1
position: 2616644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2616779:-1
position: 2616779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2614081-2614294:-1:exon

position:2614294:-1
position: 2614294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CHCHD6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: CHCHD6
product: coiled-coil-helix-coiled-coil-helix domain containing 6, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_033135640.1
SIO_010081: CHCHD6
subclass of: SO_0000673
so part of: CHCHD6
location: complement(join(2614081..2614294,2616644..2616779,2664299..2664369,2745083..2745166,2899189..2899333,2901220..2901289,2904909..2905029,2939638..2939809))
location: region:2614081-2939809:-1
so has part: feature:2939638-2939809:-1:exon
so has part: feature:2904909-2905029:-1:exon
so has part: feature:2901220-2901289:-1:exon
so has part: feature:2899189-2899333:-1:exon
so has part: feature:2745083-2745166:-1:exon
so has part: feature:2664299-2664369:-1:exon
so has part: feature:2616644-2616779:-1:exon
so has part: feature:2614081-2614294:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2939638-2939809:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2904909-2905029:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2901220-2901289:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2899189-2899333:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2745083-2745166:-1:exon

position:2745083:-1
position: 2745083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2745166:-1
position: 2745166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2664299-2664369:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2616644-2616779:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2614081-2614294:-1:exon

CHCHD6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: CHCHD6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MICOS complex subunit MIC25 isoform X2
translation: MGSIESSERRRVSFGMDEEERVRVLQGIRLSENVVNRMKDSSQPSNVCQLTFPPAPAPSAFGTSKGLEKDSKLPRSEYGGSRQPSGVEEDLKRYKQEKATVQDDLFQAVMREREAAMKHLSASLHPGEGNIDQEKRKSALLNAEMYKLSSQQFHEAASKMEGTIKPRMLEPVCSGLQAQILRCYRDHLHEVLLCSDLVKAYQHCVSTAHKG
SIO_010081: CHCHD6
subclass of: SO_0000673
so part of: CHCHD6
location: complement(join(2614289..2614294,2616644..2616779,2664299..2664369,2899189..2899333,2901220..2901289,2904909..2905029,2939638..2939724))
location: region:2614289-2939724:-1
so has part: feature:2939638-2939724:-1:exon
so has part: feature:2904909-2905029:-1:exon
so has part: feature:2901220-2901289:-1:exon
so has part: feature:2899189-2899333:-1:exon
so has part: feature:2664299-2664369:-1:exon
so has part: feature:2616644-2616779:-1:exon
so has part: feature:2614289-2614294:-1:exon

XP_032991532.1
type: Protein
SIO_000068: ncbiprotein

position:2614289:-1
position: 2614289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2939724:-1
position: 2939724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2939638-2939724:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2904909-2905029:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2901220-2901289:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2899189-2899333:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2664299-2664369:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2616644-2616779:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2614289-2614294:-1:exon

CHCHD6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: CHCHD6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MICOS complex subunit MIC25 isoform X1
translation: MGSIESSERRRVSFGMDEEERVRVLQGIRLSENVVNRMKDSSQPSNVCQLTFPPAPAPSAFGTSKGLEKDSKLPRSEYGGSRQPSGVEEDLKRYKQEKATVQDDLFQAVMREREAAMKHLSASLHPGEGNIDQEKRKSALLASELESQEAELRHRDTFYKEQLGRIEKKNAEMYKLSSQQFHEAASKMEGTIKPRMLEPVCSGLQAQILRCYRDHLHEVLLCSDLVKAYQHCVSTAHKG
SIO_010081: CHCHD6
subclass of: SO_0000673
so part of: CHCHD6
location: complement(join(2614289..2614294,2616644..2616779,2664299..2664369,2745083..2745166,2899189..2899333,2901220..2901289,2904909..2905029,2939638..2939724))
location: region:2614289-2939724:-1
so has part: feature:2939638-2939724:-1:exon
so has part: feature:2904909-2905029:-1:exon
so has part: feature:2901220-2901289:-1:exon
so has part: feature:2899189-2899333:-1:exon
so has part: feature:2745083-2745166:-1:exon
so has part: feature:2664299-2664369:-1:exon
so has part: feature:2616644-2616779:-1:exon
so has part: feature:2614289-2614294:-1:exon

XP_032991531.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2939638-2939724:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2904909-2905029:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2901220-2901289:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2899189-2899333:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2745083-2745166:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2664299-2664369:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2616644-2616779:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2614289-2614294:-1:exon

LOC117038741
type: Gene
subclass of: SO_0000704
RO_0002162: 59479
gene: LOC117038741
note: cytochrome c oxidase subunit 7C, mitochondrial-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2803292..2803480)
location: region:2803292-2803480:-1
so has part: feature:2803292-2803480:-1:exon
subclass of: SO_0000010

117038741
type: Gene
SIO_000068: ncbigene

position:2803292:-1
position: 2803292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2803480:-1
position: 2803480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2803292-2803480:-1:exon

LOC117038741
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: LOC117038741
product: cytochrome c oxidase subunit 7C, mitochondrial-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins
transcript id: XM_033135642.1
SIO_010081: LOC117038741
subclass of: SO_0000673
so part of: LOC117038741
location: complement(2803292..2803480)
location: region:2803292-2803480:-1
so has part: feature:2803292-2803480:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2803292-2803480:-1:exon

LOC117038741
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: LOC117038741
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytochrome c oxidase subunit 7C, mitochondrial-like
translation: MMGQNIWRFITSGVHRSHLEEGPGKNLLFSVGNQWRLLEMTLYFEAGFAAPFFTVKHQLPKK
SIO_010081: LOC117038741
subclass of: SO_0000673
so part of: LOC117038741
location: complement(2803292..2803480)
location: region:2803292-2803480:-1
so has part: feature:2803292-2803480:-1:exon

XP_032991533.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2803292-2803480:-1:exon

LOC117012032
type: Gene
subclass of: SO_0000704
RO_0002162: 59479
gene: LOC117012032
note: uncharacterized LOC117012032; Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: 2952453..2952555
location: region:2952453-2952555:1
so has part: feature:2952453-2952555:1:exon

117012032
type: Gene
SIO_000068: ncbigene

position:2952453:1
position: 2952453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2952555:1
position: 2952555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2952453-2952555:1:exon

LOC117012032
type: Exon
subclass of: SO_0000147
RO_0002162: 59479
gene: LOC117012032
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC117012032
subclass of: SO_0000673
so part of: LOC117012032
location: 2952453..2952555
location: region:2952453-2952555:1
so has part: feature:2952453-2952555:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2952453-2952555:1:exon

TXNRD3
type: Gene
subclass of: SO_0000704
RO_0002162: 59479
gene: TXNRD3
note: thioredoxin reductase 3; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2964926..3025462
location: region:2964926-3025462:1
so has part: feature:2964926-3025462:1:exon
subclass of: SO_0000010

117011912
type: Gene
SIO_000068: ncbigene

position:2964926:1
position: 2964926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3025462:1
position: 3025462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2964926-3025462:1:exon

TXNRD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: TXNRD3
product: thioredoxin reductase 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 29 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_033087691.1
SIO_010081: TXNRD3
subclass of: SO_0000673
so part of: TXNRD3
location: join(2964926..2965368,2979564..2979624,2981475..2981584,2983313..2983417,2983669..2983741,2985170..2985289,2993778..2993920,2995358..2995473,2996652..2996877,2998085..2998177,3004125..3004201,3006088..3006244,3010544..3010651,3014317..3014412,3023103..3023237,3023444..3025462)
location: region:2964926-3025462:1
so has part: feature:2964926-2965368:1:exon
so has part: feature:2979564-2979624:1:exon
so has part: feature:2981475-2981584:1:exon
so has part: feature:2983313-2983417:1:exon
so has part: feature:2983669-2983741:1:exon
so has part: feature:2985170-2985289:1:exon
so has part: feature:2993778-2993920:1:exon
so has part: feature:2995358-2995473:1:exon
so has part: feature:2996652-2996877:1:exon
so has part: feature:2998085-2998177:1:exon
so has part: feature:3004125-3004201:1:exon
so has part: feature:3006088-3006244:1:exon
so has part: feature:3010544-3010651:1:exon
so has part: feature:3014317-3014412:1:exon
so has part: feature:3023103-3023237:1:exon
so has part: feature:3023444-3025462:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2964926-2965368:1:exon

position:2965368:1
position: 2965368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2979564-2979624:1:exon

position:2979564:1
position: 2979564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2979624:1
position: 2979624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2981475-2981584:1:exon

position:2981475:1
position: 2981475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2981584:1
position: 2981584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2983313-2983417:1:exon

position:2983313:1
position: 2983313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2983417:1
position: 2983417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2983669-2983741:1:exon

position:2983669:1
position: 2983669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2983741:1
position: 2983741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2985170-2985289:1:exon

position:2985170:1
position: 2985170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2985289:1
position: 2985289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2993778-2993920:1:exon

position:2993778:1
position: 2993778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2993920:1
position: 2993920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2995358-2995473:1:exon

position:2995358:1
position: 2995358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2995473:1
position: 2995473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2996652-2996877:1:exon

position:2996652:1
position: 2996652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2996877:1
position: 2996877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2998085-2998177:1:exon

position:2998085:1
position: 2998085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2998177:1
position: 2998177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3004125-3004201:1:exon

position:3004125:1
position: 3004125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3004201:1
position: 3004201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3006088-3006244:1:exon

position:3006088:1
position: 3006088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3006244:1
position: 3006244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3010544-3010651:1:exon

position:3010544:1
position: 3010544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3010651:1
position: 3010651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3014317-3014412:1:exon

position:3014317:1
position: 3014317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3014412:1
position: 3014412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3023103-3023237:1:exon

position:3023103:1
position: 3023103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3023237:1
position: 3023237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3023444-3025462:1:exon

position:3023444:1
position: 3023444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TXNRD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: TXNRD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: thioredoxin reductase 3 isoform X1
translation: MIFSKSYCPHSTRVKELFSSLGVEYNILELDQVDDGASVQEVLSEITNQITVPNVFVNKVHMGGCDRTFQAHQSGLLQKLLQKESAYDYDLIVIGGGSGGLACAQEAAILGKKVMVLDFVVPSPQGTSWGLGGTCVNVGCVPKKLMHQAALLGQALSDSRKFGWEYNQQAKHNWETMTEAIQNHIGSLNWSYRVSLREKAVAYVNSYGEFVEHHKIKATNRKGQETCYTAAKFVIATGERPRYLGIQGDKEYCITSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSVLLRGFDQEMAEKVGSYMEQHGIKFLRKFIPVMVQQLEKGLPGKLKVVAKSTEGPETMEGVYNTVLLAIGRDSCTRKIGLEKIGVKINEKTGKIPVNDVEQTNVPYVYAVGDVLEGKLELTPVAIQAGKLLARRLFGDHLEKCDYINVPTTVFTPLEYGCCGLSEEKAIEVYKKENLEVYHTFFWPLEWTVAGRDNNTCYAKIICNKFNNNRVIGFHILGPNAGEVTQGFAVAMKCGLTKQLLDDTIGIHPTCGEVFTTLEITKSSGLDISQKGC
SIO_010081: TXNRD3
subclass of: SO_0000673
so part of: TXNRD3
location: join(2965330..2965368,2979564..2979624,2981475..2981584,2983313..2983417,2983669..2983741,2985170..2985289,2993778..2993920,2995358..2995473,2996652..2996877,2998085..2998177,3004125..3004201,3006088..3006244,3010544..3010651,3014317..3014412,3023103..3023237,3023444..3023506)
location: region:2965330-3023506:1
so has part: feature:2965330-2965368:1:exon
so has part: feature:2979564-2979624:1:exon
so has part: feature:2981475-2981584:1:exon
so has part: feature:2983313-2983417:1:exon
so has part: feature:2983669-2983741:1:exon
so has part: feature:2985170-2985289:1:exon
so has part: feature:2993778-2993920:1:exon
so has part: feature:2995358-2995473:1:exon
so has part: feature:2996652-2996877:1:exon
so has part: feature:2998085-2998177:1:exon
so has part: feature:3004125-3004201:1:exon
so has part: feature:3006088-3006244:1:exon
so has part: feature:3010544-3010651:1:exon
so has part: feature:3014317-3014412:1:exon
so has part: feature:3023103-3023237:1:exon
so has part: feature:3023444-3023506:1:exon

XP_032943582.1
type: Protein
SIO_000068: ncbiprotein

position:2965330:1
position: 2965330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3023506:1
position: 3023506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2965330-2965368:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2979564-2979624:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2981475-2981584:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2983313-2983417:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2983669-2983741:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2985170-2985289:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2993778-2993920:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2995358-2995473:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2996652-2996877:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2998085-2998177:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3004125-3004201:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3006088-3006244:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3010544-3010651:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3014317-3014412:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3023103-3023237:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3023444-3023506:1:exon

TXNRD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: TXNRD3
product: thioredoxin reductase 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_033087692.1
SIO_010081: TXNRD3
subclass of: SO_0000673
so part of: TXNRD3
location: join(2965467..2965586,2979564..2979624,2981475..2981584,2983313..2983417,2983669..2983741,2985170..2985289,2993778..2993920,2995358..2995473,2996652..2996877,2998085..2998177,3004125..3004201,3006088..3006244,3010544..3010651,3014317..3014412,3023103..3023237,3023444..3025462)
location: region:2965467-3025462:1
so has part: feature:2965467-2965586:1:exon
so has part: feature:2979564-2979624:1:exon
so has part: feature:2981475-2981584:1:exon
so has part: feature:2983313-2983417:1:exon
so has part: feature:2983669-2983741:1:exon
so has part: feature:2985170-2985289:1:exon
so has part: feature:2993778-2993920:1:exon
so has part: feature:2995358-2995473:1:exon
so has part: feature:2996652-2996877:1:exon
so has part: feature:2998085-2998177:1:exon
so has part: feature:3004125-3004201:1:exon
so has part: feature:3006088-3006244:1:exon
so has part: feature:3010544-3010651:1:exon
so has part: feature:3014317-3014412:1:exon
so has part: feature:3023103-3023237:1:exon
so has part: feature:3023444-3025462:1:exon

position:2965467:1
position: 2965467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2965467-2965586:1:exon

position:2965586:1
position: 2965586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2979564-2979624:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2981475-2981584:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2983313-2983417:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2983669-2983741:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2985170-2985289:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2993778-2993920:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2995358-2995473:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2996652-2996877:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2998085-2998177:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3004125-3004201:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3006088-3006244:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3010544-3010651:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3014317-3014412:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3023103-3023237:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3023444-3025462:1:exon

TXNRD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: TXNRD3
product: thioredoxin reductase 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033087693.1
SIO_010081: TXNRD3
subclass of: SO_0000673
so part of: TXNRD3
location: join(2965706..2965724,2979564..2979624,2981475..2981584,2983313..2983417,2983669..2983741,2985170..2985289,2993778..2993920,2995358..2995473,2996652..2996877,2998085..2998177,3004125..3004201,3006088..3006244,3010544..3010651,3014317..3014412,3023103..3023237,3023444..3025462)
location: region:2965706-3025462:1
so has part: feature:2965706-2965724:1:exon
so has part: feature:2979564-2979624:1:exon
so has part: feature:2981475-2981584:1:exon
so has part: feature:2983313-2983417:1:exon
so has part: feature:2983669-2983741:1:exon
so has part: feature:2985170-2985289:1:exon
so has part: feature:2993778-2993920:1:exon
so has part: feature:2995358-2995473:1:exon
so has part: feature:2996652-2996877:1:exon
so has part: feature:2998085-2998177:1:exon
so has part: feature:3004125-3004201:1:exon
so has part: feature:3006088-3006244:1:exon
so has part: feature:3010544-3010651:1:exon
so has part: feature:3014317-3014412:1:exon
so has part: feature:3023103-3023237:1:exon
so has part: feature:3023444-3025462:1:exon

position:2965706:1
position: 2965706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2965706-2965724:1:exon

position:2965724:1
position: 2965724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2979564-2979624:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2981475-2981584:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2983313-2983417:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2983669-2983741:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2985170-2985289:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2993778-2993920:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2995358-2995473:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2996652-2996877:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2998085-2998177:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3004125-3004201:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3006088-3006244:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3010544-3010651:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3014317-3014412:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3023103-3023237:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3023444-3025462:1:exon

LOC117038649
type: Gene
subclass of: SO_0000704
RO_0002162: 59479
gene: LOC117038649
note: nucleophosmin-like; Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(2974663..2977853)
location: region:2974663-2977853:-1
so has part: feature:2974663-2977853:-1:exon

117038649
type: Gene
SIO_000068: ncbigene

position:2974663:-1
position: 2974663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2977853:-1
position: 2977853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2974663-2977853:-1:exon

LOC117038649
type: Exon
subclass of: SO_0000147
RO_0002162: 59479
gene: LOC117038649
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
pseudo: true
SIO_010081: LOC117038649
subclass of: SO_0000673
so part of: LOC117038649
location: complement(2974663..2975552)
location: region:2974663-2975552:-1
so has part: feature:2974663-2975552:-1:exon

position:2975552:-1
position: 2975552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2974663-2975552:-1:exon

LOC117038649
type: Exon
subclass of: SO_0000147
RO_0002162: 59479
gene: LOC117038649
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
pseudo: true
SIO_010081: LOC117038649
subclass of: SO_0000673
so part of: LOC117038649
location: complement(2977776..2977853)
location: region:2977776-2977853:-1
so has part: feature:2977776-2977853:-1:exon

position:2977776:-1
position: 2977776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2977776-2977853:-1:exon

TXNRD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: TXNRD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: thioredoxin reductase 3 isoform X2
translation: MGGCDRTFQAHQSGLLQKLLQKESAYDYDLIVIGGGSGGLACAQEAAILGKKVMVLDFVVPSPQGTSWGLGGTCVNVGCVPKKLMHQAALLGQALSDSRKFGWEYNQQAKHNWETMTEAIQNHIGSLNWSYRVSLREKAVAYVNSYGEFVEHHKIKATNRKGQETCYTAAKFVIATGERPRYLGIQGDKEYCITSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSVLLRGFDQEMAEKVGSYMEQHGIKFLRKFIPVMVQQLEKGLPGKLKVVAKSTEGPETMEGVYNTVLLAIGRDSCTRKIGLEKIGVKINEKTGKIPVNDVEQTNVPYVYAVGDVLEGKLELTPVAIQAGKLLARRLFGDHLEKCDYINVPTTVFTPLEYGCCGLSEEKAIEVYKKENLEVYHTFFWPLEWTVAGRDNNTCYAKIICNKFNNNRVIGFHILGPNAGEVTQGFAVAMKCGLTKQLLDDTIGIHPTCGEVFTTLEITKSSGLDISQKGC
SIO_010081: TXNRD3
subclass of: SO_0000673
so part of: TXNRD3
location: join(2981558..2981584,2983313..2983417,2983669..2983741,2985170..2985289,2993778..2993920,2995358..2995473,2996652..2996877,2998085..2998177,3004125..3004201,3006088..3006244,3010544..3010651,3014317..3014412,3023103..3023237,3023444..3023506)
location: region:2981558-3023506:1
so has part: feature:2981558-2981584:1:exon
so has part: feature:2983313-2983417:1:exon
so has part: feature:2983669-2983741:1:exon
so has part: feature:2985170-2985289:1:exon
so has part: feature:2993778-2993920:1:exon
so has part: feature:2995358-2995473:1:exon
so has part: feature:2996652-2996877:1:exon
so has part: feature:2998085-2998177:1:exon
so has part: feature:3004125-3004201:1:exon
so has part: feature:3006088-3006244:1:exon
so has part: feature:3010544-3010651:1:exon
so has part: feature:3014317-3014412:1:exon
so has part: feature:3023103-3023237:1:exon
so has part: feature:3023444-3023506:1:exon

XP_032943583.1
type: Protein
SIO_000068: ncbiprotein

position:2981558:1
position: 2981558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2981558-2981584:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2983313-2983417:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2983669-2983741:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2985170-2985289:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2993778-2993920:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2995358-2995473:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2996652-2996877:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2998085-2998177:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3004125-3004201:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3006088-3006244:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3010544-3010651:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3014317-3014412:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3023103-3023237:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3023444-3023506:1:exon

TXNRD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: TXNRD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: thioredoxin reductase 3 isoform X2
translation: MGGCDRTFQAHQSGLLQKLLQKESAYDYDLIVIGGGSGGLACAQEAAILGKKVMVLDFVVPSPQGTSWGLGGTCVNVGCVPKKLMHQAALLGQALSDSRKFGWEYNQQAKHNWETMTEAIQNHIGSLNWSYRVSLREKAVAYVNSYGEFVEHHKIKATNRKGQETCYTAAKFVIATGERPRYLGIQGDKEYCITSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSVLLRGFDQEMAEKVGSYMEQHGIKFLRKFIPVMVQQLEKGLPGKLKVVAKSTEGPETMEGVYNTVLLAIGRDSCTRKIGLEKIGVKINEKTGKIPVNDVEQTNVPYVYAVGDVLEGKLELTPVAIQAGKLLARRLFGDHLEKCDYINVPTTVFTPLEYGCCGLSEEKAIEVYKKENLEVYHTFFWPLEWTVAGRDNNTCYAKIICNKFNNNRVIGFHILGPNAGEVTQGFAVAMKCGLTKQLLDDTIGIHPTCGEVFTTLEITKSSGLDISQKGC
SIO_010081: TXNRD3
subclass of: SO_0000673
so part of: TXNRD3
location: join(2981558..2981584,2983313..2983417,2983669..2983741,2985170..2985289,2993778..2993920,2995358..2995473,2996652..2996877,2998085..2998177,3004125..3004201,3006088..3006244,3010544..3010651,3014317..3014412,3023103..3023237,3023444..3023506)
location: region:2981558-3023506:1
so has part: feature:2981558-2981584:1:exon
so has part: feature:2983313-2983417:1:exon
so has part: feature:2983669-2983741:1:exon
so has part: feature:2985170-2985289:1:exon
so has part: feature:2993778-2993920:1:exon
so has part: feature:2995358-2995473:1:exon
so has part: feature:2996652-2996877:1:exon
so has part: feature:2998085-2998177:1:exon
so has part: feature:3004125-3004201:1:exon
so has part: feature:3006088-3006244:1:exon
so has part: feature:3010544-3010651:1:exon
so has part: feature:3014317-3014412:1:exon
so has part: feature:3023103-3023237:1:exon
so has part: feature:3023444-3023506:1:exon

XP_032943584.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2981558-2981584:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2983313-2983417:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2983669-2983741:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2985170-2985289:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2993778-2993920:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2995358-2995473:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2996652-2996877:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2998085-2998177:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3004125-3004201:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3006088-3006244:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3010544-3010651:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3014317-3014412:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3023103-3023237:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3023444-3023506:1:exon

LOC117011913
type: Gene
subclass of: SO_0000704
RO_0002162: 59479
gene: LOC117011913
note: protein S100-A11-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3001696..3002004)
location: region:3001696-3002004:-1
so has part: feature:3001696-3002004:-1:exon
subclass of: SO_0000010

117011913
type: Gene
SIO_000068: ncbigene

position:3001696:-1
position: 3001696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3002004:-1
position: 3002004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3001696-3002004:-1:exon

LOC117011913
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: LOC117011913
product: protein S100-A11-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
transcript id: XM_033087694.1
SIO_010081: LOC117011913
subclass of: SO_0000673
so part of: LOC117011913
location: complement(3001696..3002004)
location: region:3001696-3002004:-1
so has part: feature:3001696-3002004:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3001696-3002004:-1:exon

LOC117011913
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: LOC117011913
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein S100-A11-like
translation: MAKMSSPTETEQCIKSLIAVFQKYAGKVRNKCNLSKTEFLTFMNIELAAFTKNQKDPGVLDCMMKKLDLNCEGQLDFQEFLNLIGDLAVACHDFFTRSQKCI
SIO_010081: LOC117011913
subclass of: SO_0000673
so part of: LOC117011913
location: complement(3001696..3002004)
location: region:3001696-3002004:-1
so has part: feature:3001696-3002004:-1:exon

XP_032943585.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3001696-3002004:-1:exon

C19H3orf22
type: Gene
subclass of: SO_0000704
RO_0002162: 59479
gene: C19H3orf22
note: chromosome 19 C3orf22 homolog; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3069865..3074539
location: region:3069865-3074539:1
so has part: feature:3069865-3074539:1:exon
subclass of: SO_0000010

117038666
type: Gene
SIO_000068: ncbigene

position:3069865:1
position: 3069865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3074539:1
position: 3074539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3069865-3074539:1:exon

C19H3orf22
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: C19H3orf22
product: chromosome 19 C3orf22 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_033135566.1
SIO_010081: C19H3orf22
subclass of: SO_0000673
so part of: C19H3orf22
location: join(3069865..3069953,3071848..3071979,3074371..3074539)
location: region:3069865-3074539:1
so has part: feature:3069865-3069953:1:exon
so has part: feature:3071848-3071979:1:exon
so has part: feature:3074371-3074539:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3069865-3069953:1:exon

position:3069953:1
position: 3069953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3071848-3071979:1:exon

position:3071848:1
position: 3071848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3071979:1
position: 3071979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3074371-3074539:1:exon

position:3074371:1
position: 3074371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

C19H3orf22
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: C19H3orf22
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C3orf22 homolog
translation: MDTRAPKKCPQYKKSKIKAQEKFARKFPYRFSWLTESNPESLQPWEVTKMNSSLREQLPLQKMLVPTRSIPVRGLGAVDFTSLSIFRPLPPPPLSNLWELKLLSHRFPGSGIHSALPGTHVNPSSRGLS
SIO_010081: C19H3orf22
subclass of: SO_0000673
so part of: C19H3orf22
location: join(3069865..3069953,3071848..3071979,3074371..3074539)
location: region:3069865-3074539:1
so has part: feature:3069865-3069953:1:exon
so has part: feature:3071848-3071979:1:exon
so has part: feature:3074371-3074539:1:exon

XP_032991457.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3069865-3069953:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3071848-3071979:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3074371-3074539:1:exon

CHST13
type: Gene
subclass of: SO_0000704
RO_0002162: 59479
gene: CHST13
note: carbohydrate sulfotransferase 13; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3079704..3125227)
location: region:3079704-3125227:-1
so has part: feature:3079704-3125227:-1:exon
subclass of: SO_0000010

117038644
type: Gene
SIO_000068: ncbigene

position:3079704:-1
position: 3079704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3125227:-1
position: 3125227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3079704-3125227:-1:exon

CHST13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: CHST13
product: carbohydrate sulfotransferase 13, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_033135557.1
SIO_010081: CHST13
subclass of: SO_0000673
so part of: CHST13
location: complement(join(3079704..3081230,3085771..3085853,3125041..3125227))
location: region:3079704-3125227:-1
so has part: feature:3125041-3125227:-1:exon
so has part: feature:3085771-3085853:-1:exon
so has part: feature:3079704-3081230:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3125041-3125227:-1:exon

position:3125041:-1
position: 3125041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3085771-3085853:-1:exon

position:3085771:-1
position: 3085771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3085853:-1
position: 3085853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3079704-3081230:-1:exon

position:3081230:-1
position: 3081230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CHST13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: CHST13
product: carbohydrate sulfotransferase 13, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_033135556.1
SIO_010081: CHST13
subclass of: SO_0000673
so part of: CHST13
location: complement(join(3079704..3081230,3085771..3085853,3124852..3125032))
location: region:3079704-3125032:-1
so has part: feature:3124852-3125032:-1:exon
so has part: feature:3085771-3085853:-1:exon
so has part: feature:3079704-3081230:-1:exon

position:3125032:-1
position: 3125032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3124852-3125032:-1:exon

position:3124852:-1
position: 3124852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3085771-3085853:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3079704-3081230:-1:exon

CHST13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: CHST13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carbohydrate sulfotransferase 13 isoform X1
translation: MGRLCWRRRALAAACLGAVLLLLWPVPRALLPESENSALGSSWLHGKKKSPLQMLYDLNKGPLSALAEVHRQRRDLLQRACSRHTRRQRLLQPEDLQHVLVDDTHGLLYCYVPKVACTNWKRVLLALNGSVRGDPRSIPAHEVHAPGRLPSLADFSPAEINRRLRAYLAFLFVREPFERLASAYSNKFVRPYSAAFQQRYGTRIVRRLRPRPHPEALARGHDVRFAEFLAYLLDPRTRRDEPFNEHWERAHALCHPCRLRYDIVGKFETLAEDATFVLGFVGLPGLRFPAPPPPAKAATTHDQAARLFQDISPFYQRRLFDLYRMDFLLFNYSTPSYLRLH
SIO_010081: CHST13
subclass of: SO_0000673
so part of: CHST13
location: complement(join(3080385..3081230,3085771..3085853,3124852..3124948))
location: region:3080385-3124948:-1
so has part: feature:3124852-3124948:-1:exon
so has part: feature:3085771-3085853:-1:exon
so has part: feature:3080385-3081230:-1:exon

XP_032991447.1
type: Protein
SIO_000068: ncbiprotein

position:3080385:-1
position: 3080385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3124948:-1
position: 3124948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3124852-3124948:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3085771-3085853:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3080385-3081230:-1:exon

CHST13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: CHST13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carbohydrate sulfotransferase 13 isoform X2
translation: MLYDLNKGPLSALAEVHRQRRDLLQRACSRHTRRQRLLQPEDLQHVLVDDTHGLLYCYVPKVACTNWKRVLLALNGSVRGDPRSIPAHEVHAPGRLPSLADFSPAEINRRLRAYLAFLFVREPFERLASAYSNKFVRPYSAAFQQRYGTRIVRRLRPRPHPEALARGHDVRFAEFLAYLLDPRTRRDEPFNEHWERAHALCHPCRLRYDIVGKFETLAEDATFVLGFVGLPGLRFPAPPPPAKAATTHDQAARLFQDISPFYQRRLFDLYRMDFLLFNYSTPSYLRLH
SIO_010081: CHST13
subclass of: SO_0000673
so part of: CHST13
location: complement(join(3080385..3081230,3085771..3085791))
location: region:3080385-3085791:-1
so has part: feature:3085771-3085791:-1:exon
so has part: feature:3080385-3081230:-1:exon

XP_032991448.1
type: Protein
SIO_000068: ncbiprotein

position:3085791:-1
position: 3085791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3085771-3085791:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3080385-3081230:-1:exon

LOC117038650
type: Gene
subclass of: SO_0000704
RO_0002162: 59479
gene: LOC117038650
note: uncharacterized LOC117038650; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3089741..3117422
location: region:3089741-3117422:1
so has part: feature:3089741-3117422:1:exon
subclass of: SO_0000010

117038650
type: Gene
SIO_000068: ncbigene

position:3089741:1
position: 3089741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3117422:1
position: 3117422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3089741-3117422:1:exon

LOC117038650
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: LOC117038650
product: uncharacterized LOC117038650
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 22 Proteins, and 35% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033135559.1
SIO_010081: LOC117038650
subclass of: SO_0000673
so part of: LOC117038650
location: join(3089741..3090093,3117220..3117422)
location: region:3089741-3117422:1
so has part: feature:3089741-3090093:1:exon
so has part: feature:3117220-3117422:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3089741-3090093:1:exon

position:3090093:1
position: 3090093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3117220-3117422:1:exon

position:3117220:1
position: 3117220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117038650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: LOC117038650
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC117038650
translation: MAKCAKKIGIDGKYGTRYGASLRKMKKIEISQHAKYTCSFCGKTKMKRRAVAIWHCGSCMKTVAGGAWTYNTTSAVTVKSAIRRLKELKDQYSRSSTIETLLYNKCVNLCNNNNKKRQVEEVRSVGPTFVLGFTVDPGLELLFLNPGPEISVKPMAAFLAVRHVPGMPLSSENELTGKGSNVG
SIO_010081: LOC117038650
subclass of: SO_0000673
so part of: LOC117038650
location: join(3089745..3090093,3117220..3117422)
location: region:3089745-3117422:1
so has part: feature:3089745-3090093:1:exon
so has part: feature:3117220-3117422:1:exon

XP_032991450.1
type: Protein
SIO_000068: ncbiprotein

position:3089745:1
position: 3089745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3089745-3090093:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3117220-3117422:1:exon

UROC1
type: Gene
subclass of: SO_0000704
RO_0002162: 59479
gene: UROC1
note: urocanate hydratase 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3132916..3173479
location: region:3132916-3173479:1
so has part: feature:3132916-3173479:1:exon
subclass of: SO_0000010

117011745
type: Gene
SIO_000068: ncbigene

position:3132916:1
position: 3132916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3173479:1
position: 3173479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3132916-3173479:1:exon

UROC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: UROC1
product: urocanate hydratase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033087391.1
SIO_010081: UROC1
subclass of: SO_0000673
so part of: UROC1
location: join(3132916..3133124,3142216..3142346,3143517..3143610,3144494..3144553,3144884..3145012,3145147..3145208,3148678..3148744,3148834..3148977,3150147..3150235,3152336..3152398,3152758..3152937,3153242..3153339,3154062..3154134,3155519..3155640,3157320..3157390,3159710..3159808,3161490..3161589,3164245..3164326,3171331..3171430,3172606..3173479)
location: region:3132916-3173479:1
so has part: feature:3132916-3133124:1:exon
so has part: feature:3142216-3142346:1:exon
so has part: feature:3143517-3143610:1:exon
so has part: feature:3144494-3144553:1:exon
so has part: feature:3144884-3145012:1:exon
so has part: feature:3145147-3145208:1:exon
so has part: feature:3148678-3148744:1:exon
so has part: feature:3148834-3148977:1:exon
so has part: feature:3150147-3150235:1:exon
so has part: feature:3152336-3152398:1:exon
so has part: feature:3152758-3152937:1:exon
so has part: feature:3153242-3153339:1:exon
so has part: feature:3154062-3154134:1:exon
so has part: feature:3155519-3155640:1:exon
so has part: feature:3157320-3157390:1:exon
so has part: feature:3159710-3159808:1:exon
so has part: feature:3161490-3161589:1:exon
so has part: feature:3164245-3164326:1:exon
so has part: feature:3171331-3171430:1:exon
so has part: feature:3172606-3173479:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3132916-3133124:1:exon

position:3133124:1
position: 3133124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3142216-3142346:1:exon

position:3142216:1
position: 3142216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3142346:1
position: 3142346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3143517-3143610:1:exon

position:3143517:1
position: 3143517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3143610:1
position: 3143610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3144494-3144553:1:exon

position:3144494:1
position: 3144494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3144553:1
position: 3144553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3144884-3145012:1:exon

position:3144884:1
position: 3144884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3145012:1
position: 3145012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3145147-3145208:1:exon

position:3145147:1
position: 3145147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3145208:1
position: 3145208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3148678-3148744:1:exon

position:3148678:1
position: 3148678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3148744:1
position: 3148744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3148834-3148977:1:exon

position:3148834:1
position: 3148834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3148977:1
position: 3148977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3150147-3150235:1:exon

position:3150147:1
position: 3150147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3150235:1
position: 3150235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3152336-3152398:1:exon

position:3152336:1
position: 3152336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3152398:1
position: 3152398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3152758-3152937:1:exon

position:3152758:1
position: 3152758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3152937:1
position: 3152937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3153242-3153339:1:exon

position:3153242:1
position: 3153242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3153339:1
position: 3153339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3154062-3154134:1:exon

position:3154062:1
position: 3154062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3154134:1
position: 3154134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3155519-3155640:1:exon

position:3155519:1
position: 3155519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3155640:1
position: 3155640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3157320-3157390:1:exon

position:3157320:1
position: 3157320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3157390:1
position: 3157390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3159710-3159808:1:exon

position:3159710:1
position: 3159710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3159808:1
position: 3159808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3161490-3161589:1:exon

position:3161490:1
position: 3161490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3161589:1
position: 3161589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3164245-3164326:1:exon

position:3164245:1
position: 3164245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3164326:1
position: 3164326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:3171331-3171430:1:exon

position:3171331:1
position: 3171331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3171430:1
position: 3171430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:3172606-3173479:1:exon

position:3172606:1
position: 3172606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

UROC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: UROC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: urocanate hydratase
translation: MSSLQALCSGLPLRPLPENQGRWAGVPHAPVRTPGLSPAEEQLALRNALRYFPPDVQELLAPEFAQELRLYGHIYMYRFCPHIEMRAYPIEQYPCRTRAAAAIMHMIMNNLDPAVAQFPQELVTYGGNGQVFSNWAQFWLMMSYLSQMTEEQTLVMYSGHSLGLFPSSPGAPRLVITNGMVIPNYSSRTEYEKLFAIGVTMYGQMTAGSYCYIGPQGIVHGTVLTVLNAGRRYLGVEDLAGKVFVTSGLGGMSGAQAKAAAIVGCIGVIAEVDKAALMKRHQQGWLMEVTDSLDKCIERLREARRKKEVLSLGYHGNVVDLWERLVHELDTTGELLVDLGSDQTSCHNPFNGGYYPVQLGFSEAQSLMASDPATFKGLVQESLRRQVSAINRLAKENFFFWDYGNAFLLEAQRAGADVEKKGAKRTEFRYPSYVQHIMGDIFSQGFGPFRWVCTSGDPQDLAVTDQLATSVLEEAIAGGVNPAVKLQYVDNIRWIREAAKHQLVVGSQARILYSDQKGRVAIAVAFNQAIAQGKIKAPVVLSRDHHDVSGTDSPFRETSNIYDGSAFCADMAVQNFVGDAFRGATWVALHNGGGVGWGEVINGGFGLMLDGTQEAEQKAKMMLSWDVSNGVARRCWSGNRKAYEIICQTMRENKGLVVTLPHEVADERLLQQALGP
SIO_010081: UROC1
subclass of: SO_0000673
so part of: UROC1
location: join(3132999..3133124,3142216..3142346,3143517..3143610,3144494..3144553,3144884..3145012,3145147..3145208,3148678..3148744,3148834..3148977,3150147..3150235,3152336..3152398,3152758..3152937,3153242..3153339,3154062..3154134,3155519..3155640,3157320..3157390,3159710..3159808,3161490..3161589,3164245..3164326,3171331..3171430,3172606..3172746)
location: region:3132999-3172746:1
so has part: feature:3132999-3133124:1:exon
so has part: feature:3142216-3142346:1:exon
so has part: feature:3143517-3143610:1:exon
so has part: feature:3144494-3144553:1:exon
so has part: feature:3144884-3145012:1:exon
so has part: feature:3145147-3145208:1:exon
so has part: feature:3148678-3148744:1:exon
so has part: feature:3148834-3148977:1:exon
so has part: feature:3150147-3150235:1:exon
so has part: feature:3152336-3152398:1:exon
so has part: feature:3152758-3152937:1:exon
so has part: feature:3153242-3153339:1:exon
so has part: feature:3154062-3154134:1:exon
so has part: feature:3155519-3155640:1:exon
so has part: feature:3157320-3157390:1:exon
so has part: feature:3159710-3159808:1:exon
so has part: feature:3161490-3161589:1:exon
so has part: feature:3164245-3164326:1:exon
so has part: feature:3171331-3171430:1:exon
so has part: feature:3172606-3172746:1:exon

XP_032943282.1
type: Protein
SIO_000068: ncbiprotein

position:3132999:1
position: 3132999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3172746:1
position: 3172746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3132999-3133124:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3142216-3142346:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3143517-3143610:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3144494-3144553:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3144884-3145012:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3145147-3145208:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3148678-3148744:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3148834-3148977:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3150147-3150235:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3152336-3152398:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3152758-3152937:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3153242-3153339:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3154062-3154134:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3155519-3155640:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3157320-3157390:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3159710-3159808:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3161490-3161589:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3164245-3164326:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3171331-3171430:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3172606-3172746:1:exon

ZXDC
type: Gene
subclass of: SO_0000704
RO_0002162: 59479
gene: ZXDC
note: ZXD family zinc finger C; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3202568..3253302
location: region:3202568-3253302:1
so has part: feature:3202568-3253302:1:exon
subclass of: SO_0000010

117011992
type: Gene
SIO_000068: ncbigene

position:3202568:1
position: 3202568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3253302:1
position: 3253302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3202568-3253302:1:exon

ZXDC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: ZXDC
product: ZXD family zinc finger C, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_033087918.1
SIO_010081: ZXDC
subclass of: SO_0000673
so part of: ZXDC
location: join(3202568..3203597,3206008..3206160,3206256..3206334,3207283..3207413,3212024..3212194,3215933..3216633,3217789..3217851,3218507..3218591,3238747..3238913,3241223..3241324,3251670..3253302)
location: region:3202568-3253302:1
so has part: feature:3202568-3203597:1:exon
so has part: feature:3206008-3206160:1:exon
so has part: feature:3206256-3206334:1:exon
so has part: feature:3207283-3207413:1:exon
so has part: feature:3212024-3212194:1:exon
so has part: feature:3215933-3216633:1:exon
so has part: feature:3217789-3217851:1:exon
so has part: feature:3218507-3218591:1:exon
so has part: feature:3238747-3238913:1:exon
so has part: feature:3241223-3241324:1:exon
so has part: feature:3251670-3253302:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3202568-3203597:1:exon

position:3203597:1
position: 3203597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3206008-3206160:1:exon

position:3206008:1
position: 3206008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3206160:1
position: 3206160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3206256-3206334:1:exon

position:3206256:1
position: 3206256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3206334:1
position: 3206334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3207283-3207413:1:exon

position:3207283:1
position: 3207283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3207413:1
position: 3207413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3212024-3212194:1:exon

position:3212024:1
position: 3212024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3212194:1
position: 3212194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3215933-3216633:1:exon

position:3215933:1
position: 3215933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3216633:1
position: 3216633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3217789-3217851:1:exon

position:3217789:1
position: 3217789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3217851:1
position: 3217851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3218507-3218591:1:exon

position:3218507:1
position: 3218507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3218591:1
position: 3218591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3238747-3238913:1:exon

position:3238747:1
position: 3238747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3238913:1
position: 3238913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3241223-3241324:1:exon

position:3241223:1
position: 3241223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3241324:1
position: 3241324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3251670-3253302:1:exon

position:3251670:1
position: 3251670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ZXDC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: ZXDC
product: ZXD family zinc finger C, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_033087921.1
SIO_010081: ZXDC
subclass of: SO_0000673
so part of: ZXDC
location: join(3202568..3203597,3206008..3206160,3206256..3206334,3207283..3207413,3212024..3212194,3215933..3216633,3217789..3217851,3218507..3218591,3238747..3238913,3241223..3241324,3241762..3241815)
location: region:3202568-3241815:1
so has part: feature:3202568-3203597:1:exon
so has part: feature:3206008-3206160:1:exon
so has part: feature:3206256-3206334:1:exon
so has part: feature:3207283-3207413:1:exon
so has part: feature:3212024-3212194:1:exon
so has part: feature:3215933-3216633:1:exon
so has part: feature:3217789-3217851:1:exon
so has part: feature:3218507-3218591:1:exon
so has part: feature:3238747-3238913:1:exon
so has part: feature:3241223-3241324:1:exon
so has part: feature:3241762-3241815:1:exon

position:3241815:1
position: 3241815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3202568-3203597:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3206008-3206160:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3206256-3206334:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3207283-3207413:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3212024-3212194:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3215933-3216633:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3217789-3217851:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3218507-3218591:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3238747-3238913:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3241223-3241324:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3241762-3241815:1:exon

position:3241762:1
position: 3241762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ZXDC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: ZXDC
product: ZXD family zinc finger C, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_033087922.1
SIO_010081: ZXDC
subclass of: SO_0000673
so part of: ZXDC
location: join(3202569..3203597,3206008..3206160,3206256..3206334,3207283..3207413,3212024..3212194,3215933..3216633,3217789..3217851,3218507..3218591,3238747..3238913,3251670..3253302)
location: region:3202569-3253302:1
so has part: feature:3202569-3203597:1:exon
so has part: feature:3206008-3206160:1:exon
so has part: feature:3206256-3206334:1:exon
so has part: feature:3207283-3207413:1:exon
so has part: feature:3212024-3212194:1:exon
so has part: feature:3215933-3216633:1:exon
so has part: feature:3217789-3217851:1:exon
so has part: feature:3218507-3218591:1:exon
so has part: feature:3238747-3238913:1:exon
so has part: feature:3251670-3253302:1:exon

position:3202569:1
position: 3202569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3202569-3203597:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3206008-3206160:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3206256-3206334:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3207283-3207413:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3212024-3212194:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3215933-3216633:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3217789-3217851:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3218507-3218591:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3238747-3238913:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3251670-3253302:1:exon

ZXDC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: ZXDC
product: ZXD family zinc finger C, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_033087923.1
SIO_010081: ZXDC
subclass of: SO_0000673
so part of: ZXDC
location: join(3202570..3203597,3206008..3206160,3206256..3206334,3207283..3207413,3212024..3212194,3215933..3216633,3217789..3217851,3218507..3218591,3251670..3253300)
location: region:3202570-3253300:1
so has part: feature:3202570-3203597:1:exon
so has part: feature:3206008-3206160:1:exon
so has part: feature:3206256-3206334:1:exon
so has part: feature:3207283-3207413:1:exon
so has part: feature:3212024-3212194:1:exon
so has part: feature:3215933-3216633:1:exon
so has part: feature:3217789-3217851:1:exon
so has part: feature:3218507-3218591:1:exon
so has part: feature:3251670-3253300:1:exon

position:3202570:1
position: 3202570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3253300:1
position: 3253300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3202570-3203597:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3206008-3206160:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3206256-3206334:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3207283-3207413:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3212024-3212194:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3215933-3216633:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3217789-3217851:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3218507-3218591:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3251670-3253300:1:exon

ZXDC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: ZXDC
product: ZXD family zinc finger C, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_033087920.1
SIO_010081: ZXDC
subclass of: SO_0000673
so part of: ZXDC
location: join(3202572..3203597,3206008..3206160,3206256..3206334,3207283..3207413,3212024..3212194,3215933..3216633,3218507..3218591,3238747..3238913,3241223..3241324,3251670..3253299)
location: region:3202572-3253299:1
so has part: feature:3202572-3203597:1:exon
so has part: feature:3206008-3206160:1:exon
so has part: feature:3206256-3206334:1:exon
so has part: feature:3207283-3207413:1:exon
so has part: feature:3212024-3212194:1:exon
so has part: feature:3215933-3216633:1:exon
so has part: feature:3218507-3218591:1:exon
so has part: feature:3238747-3238913:1:exon
so has part: feature:3241223-3241324:1:exon
so has part: feature:3251670-3253299:1:exon

position:3202572:1
position: 3202572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3253299:1
position: 3253299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3202572-3203597:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3206008-3206160:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3206256-3206334:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3207283-3207413:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3212024-3212194:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3215933-3216633:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3218507-3218591:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3238747-3238913:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3241223-3241324:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3251670-3253299:1:exon

ZXDC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: ZXDC
product: ZXD family zinc finger C, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_033087924.1
SIO_010081: ZXDC
subclass of: SO_0000673
so part of: ZXDC
location: join(3202574..3203597,3206008..3206160,3206256..3206334,3207283..3207413,3212024..3212194,3215933..3216633,3218507..3218591,3251670..3253297)
location: region:3202574-3253297:1
so has part: feature:3202574-3203597:1:exon
so has part: feature:3206008-3206160:1:exon
so has part: feature:3206256-3206334:1:exon
so has part: feature:3207283-3207413:1:exon
so has part: feature:3212024-3212194:1:exon
so has part: feature:3215933-3216633:1:exon
so has part: feature:3218507-3218591:1:exon
so has part: feature:3251670-3253297:1:exon

position:3202574:1
position: 3202574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3253297:1
position: 3253297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3202574-3203597:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3206008-3206160:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3206256-3206334:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3207283-3207413:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3212024-3212194:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3215933-3216633:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3218507-3218591:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3251670-3253297:1:exon

ZXDC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: ZXDC
product: ZXD family zinc finger C, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_033087925.1
SIO_010081: ZXDC
subclass of: SO_0000673
so part of: ZXDC
location: join(3202574..3203597,3206008..3206160,3206256..3206334,3207283..3207413,3212024..3212194,3215933..3216633,3238747..3238908)
location: region:3202574-3238908:1
so has part: feature:3202574-3203597:1:exon
so has part: feature:3206008-3206160:1:exon
so has part: feature:3206256-3206334:1:exon
so has part: feature:3207283-3207413:1:exon
so has part: feature:3212024-3212194:1:exon
so has part: feature:3215933-3216633:1:exon
so has part: feature:3238747-3238908:1:exon

position:3238908:1
position: 3238908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3202574-3203597:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3206008-3206160:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3206256-3206334:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3207283-3207413:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3212024-3212194:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3215933-3216633:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3238747-3238908:1:exon

ZXDC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: ZXDC
product: ZXD family zinc finger C, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_033087919.1
SIO_010081: ZXDC
subclass of: SO_0000673
so part of: ZXDC
location: join(3202612..3202678,3202739..3203597,3206008..3206160,3206256..3206334,3207283..3207413,3212024..3212194,3215933..3216633,3217789..3217851,3218507..3218591,3238747..3238913,3241223..3241324,3251670..3253301)
location: region:3202612-3253301:1
so has part: feature:3202612-3202678:1:exon
so has part: feature:3202739-3203597:1:exon
so has part: feature:3206008-3206160:1:exon
so has part: feature:3206256-3206334:1:exon
so has part: feature:3207283-3207413:1:exon
so has part: feature:3212024-3212194:1:exon
so has part: feature:3215933-3216633:1:exon
so has part: feature:3217789-3217851:1:exon
so has part: feature:3218507-3218591:1:exon
so has part: feature:3238747-3238913:1:exon
so has part: feature:3241223-3241324:1:exon
so has part: feature:3251670-3253301:1:exon

position:3202612:1
position: 3202612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3253301:1
position: 3253301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3202612-3202678:1:exon

position:3202678:1
position: 3202678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3202739-3203597:1:exon

position:3202739:1
position: 3202739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3206008-3206160:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3206256-3206334:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3207283-3207413:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3212024-3212194:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3215933-3216633:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3217789-3217851:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3218507-3218591:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3238747-3238913:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3241223-3241324:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3251670-3253301:1:exon

ZXDC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: ZXDC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein ZXDC isoform X1
translation: MDLPALLAARSPRGAQHGGGGGPGGLCRGPGPPPNPSPARRRLLLLRGPEDGGSGPGRGEARAAAAGPGPSPPPLEDGGESFVVLLEVPRSAAAEAPERREAESDFGTSPAGGPQQGPSGSAAAPGPSAALAGTVTISSQDLLVRFDHGVFTLAAAPPPPGPPAPPGDEAASPAEGRRGPPAPGPSAPGYRCPEPQCTLSFAKKHQLKVHLLTHGSSQGRRPFKCPLDGCGWAFTTSYKLKRHLQSHDKLRPFDCPVGGCGKKFTTVYNLKAHMKGHEQENLFKCEVCAERFPTHAKLSSHQRSHFEPERPYKCDFPGCEKTFITVSALFSHNRAHFREQELFSCSFPGCSKQYDKACRLKIHLRSHTGERPFICDSDSCGWTFTSMSKLLRHKRKHDDDRRFTCPVEGCGKSFTRAEHLKGHSITHLGTKPFECPVEGCCARFSARSSLYIHSKKHLQDVAAPKSRCPVSSCNRLFTSKHSMKAHVVRQHSRHPDIFPQLGAPSSLPLSSELGSPGQSELNNIDLAALFSDAPADGSGVAGASDEALTSGILTIDVTSVSSSLGGNLPANNSSLGPVDPLVLVAHSDIPPSLDSPVVLGTAATVLQQSNFNMDDVQTVSAGALGCLVALPVKNLSQDPHDLTSSSKLAVNTTTTLTSSSTPQGNTCIPELLELPAPIKVEPDSSPGPDAVGQQERSRGVPRPVFSSPPEKHSPQKDTGLSAGTGTFYLLCDVGLPRFSEHRWCVVNGLQESGGSARTDSRAIQLAKKKKQKGTGSNAGALGSIQRRMKDNKVIPIHLHASQSSWLCGNLVLSGGLPGPASAAWLQCVQVQLLKDDPSGEGVLPLVLGPQPSTSHPLFAIGLPVCVLQEVLPAAEGAAGSEDMHGTGSTVNLRNLQ
SIO_010081: ZXDC
subclass of: SO_0000673
so part of: ZXDC
location: join(3202646..3203597,3206008..3206160,3206256..3206334,3207283..3207413,3212024..3212194,3215933..3216633,3217789..3217851,3218507..3218591,3238747..3238913,3241223..3241324,3251670..3251756)
location: region:3202646-3251756:1
so has part: feature:3202646-3203597:1:exon
so has part: feature:3206008-3206160:1:exon
so has part: feature:3206256-3206334:1:exon
so has part: feature:3207283-3207413:1:exon
so has part: feature:3212024-3212194:1:exon
so has part: feature:3215933-3216633:1:exon
so has part: feature:3217789-3217851:1:exon
so has part: feature:3218507-3218591:1:exon
so has part: feature:3238747-3238913:1:exon
so has part: feature:3241223-3241324:1:exon
so has part: feature:3251670-3251756:1:exon

XP_032943809.1
type: Protein
SIO_000068: ncbiprotein

position:3202646:1
position: 3202646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3251756:1
position: 3251756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3202646-3203597:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3206008-3206160:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3206256-3206334:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3207283-3207413:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3212024-3212194:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3215933-3216633:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3217789-3217851:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3218507-3218591:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3238747-3238913:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3241223-3241324:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3251670-3251756:1:exon

ZXDC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: ZXDC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein ZXDC isoform X5
translation: MDLPALLAARSPRGAQHGGGGGPGGLCRGPGPPPNPSPARRRLLLLRGPEDGGSGPGRGEARAAAAGPGPSPPPLEDGGESFVVLLEVPRSAAAEAPERREAESDFGTSPAGGPQQGPSGSAAAPGPSAALAGTVTISSQDLLVRFDHGVFTLAAAPPPPGPPAPPGDEAASPAEGRRGPPAPGPSAPGYRCPEPQCTLSFAKKHQLKVHLLTHGSSQGRRPFKCPLDGCGWAFTTSYKLKRHLQSHDKLRPFDCPVGGCGKKFTTVYNLKAHMKGHEQENLFKCEVCAERFPTHAKLSSHQRSHFEPERPYKCDFPGCEKTFITVSALFSHNRAHFREQELFSCSFPGCSKQYDKACRLKIHLRSHTGERPFICDSDSCGWTFTSMSKLLRHKRKHDDDRRFTCPVEGCGKSFTRAEHLKGHSITHLGTKPFECPVEGCCARFSARSSLYIHSKKHLQDVAAPKSRCPVSSCNRLFTSKHSMKAHVVRQHSRHPDIFPQLGAPSSLPLSSELGSPGQSELNNIDLAALFSDAPADGSGVAGASDEALTSGILTIDVTSVSSSLGGNLPANNSSLGPVDPLVLVAHSDIPPSLDSPVVLGTAATVLQQSNFNMDDVQTVSAGALGCLVALPVKNLSQDPHDLTSSSKLAVNTTTTLTSSSTPQGNTCIPELLELPAPIKVEPDSSPGPDAVGQQERSRGVPRPVFSSPPEKHSPQKDTGLSAGTGTFYLLCDVGLPRFSEHRWCVVNGLQESGGSARTDSRAIQLAKKKKQKGTGSNAGALGSIQRRMKDNKVIPIHLHASQSSWLCGNLVLSGGLPGPASAAWLQCVQVQLLKEVLPAAEGAAGSEDMHGTGSTVNLRNLQ
SIO_010081: ZXDC
subclass of: SO_0000673
so part of: ZXDC
location: join(3202646..3203597,3206008..3206160,3206256..3206334,3207283..3207413,3212024..3212194,3215933..3216633,3217789..3217851,3218507..3218591,3238747..3238913,3251670..3251756)
location: region:3202646-3251756:1
so has part: feature:3202646-3203597:1:exon
so has part: feature:3206008-3206160:1:exon
so has part: feature:3206256-3206334:1:exon
so has part: feature:3207283-3207413:1:exon
so has part: feature:3212024-3212194:1:exon
so has part: feature:3215933-3216633:1:exon
so has part: feature:3217789-3217851:1:exon
so has part: feature:3218507-3218591:1:exon
so has part: feature:3238747-3238913:1:exon
so has part: feature:3251670-3251756:1:exon

XP_032943813.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3202646-3203597:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3206008-3206160:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3206256-3206334:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3207283-3207413:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3212024-3212194:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3215933-3216633:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3217789-3217851:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3218507-3218591:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3238747-3238913:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3251670-3251756:1:exon

ZXDC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: ZXDC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein ZXDC isoform X3
translation: MDLPALLAARSPRGAQHGGGGGPGGLCRGPGPPPNPSPARRRLLLLRGPEDGGSGPGRGEARAAAAGPGPSPPPLEDGGESFVVLLEVPRSAAAEAPERREAESDFGTSPAGGPQQGPSGSAAAPGPSAALAGTVTISSQDLLVRFDHGVFTLAAAPPPPGPPAPPGDEAASPAEGRRGPPAPGPSAPGYRCPEPQCTLSFAKKHQLKVHLLTHGSSQGRRPFKCPLDGCGWAFTTSYKLKRHLQSHDKLRPFDCPVGGCGKKFTTVYNLKAHMKGHEQENLFKCEVCAERFPTHAKLSSHQRSHFEPERPYKCDFPGCEKTFITVSALFSHNRAHFREQELFSCSFPGCSKQYDKACRLKIHLRSHTGERPFICDSDSCGWTFTSMSKLLRHKRKHDDDRRFTCPVEGCGKSFTRAEHLKGHSITHLGTKPFECPVEGCCARFSARSSLYIHSKKHLQDVAAPKSRCPVSSCNRLFTSKHSMKAHVVRQHSRHPDIFPQLGAPSSLPLSSELGSPGQSELNNIDLAALFSDAPADGSGVAGASDEALTSGILTIDVTSVSSSLGGNLPANNSSLGPVDPLVLVAHSDIPPSLDSPVVLGTAATVLQQSNFNMDDVQTVSAGALGCLVALPVKNLSQDPHDLTSSSKLAVNTTTTLTSSSTPQGNTCIPELLELPAPIKVEPDSSPGPDAVGQQERSRGVPRPVFSSPPEKHSPQKDTGLSAGTGTFYLESGGSARTDSRAIQLAKKKKQKGTGSNAGALGSIQRRMKDNKVIPIHLHASQSSWLCGNLVLSGGLPGPASAAWLQCVQVQLLKDDPSGEGVLPLVLGPQPSTSHPLFAIGLPVCVLQEVLPAAEGAAGSEDMHGTGSTVNLRNLQ
SIO_010081: ZXDC
subclass of: SO_0000673
so part of: ZXDC
location: join(3202646..3203597,3206008..3206160,3206256..3206334,3207283..3207413,3212024..3212194,3215933..3216633,3218507..3218591,3238747..3238913,3241223..3241324,3251670..3251756)
location: region:3202646-3251756:1
so has part: feature:3202646-3203597:1:exon
so has part: feature:3206008-3206160:1:exon
so has part: feature:3206256-3206334:1:exon
so has part: feature:3207283-3207413:1:exon
so has part: feature:3212024-3212194:1:exon
so has part: feature:3215933-3216633:1:exon
so has part: feature:3218507-3218591:1:exon
so has part: feature:3238747-3238913:1:exon
so has part: feature:3241223-3241324:1:exon
so has part: feature:3251670-3251756:1:exon

XP_032943811.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3202646-3203597:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3206008-3206160:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3206256-3206334:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3207283-3207413:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3212024-3212194:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3215933-3216633:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3218507-3218591:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3238747-3238913:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3241223-3241324:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3251670-3251756:1:exon

ZXDC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: ZXDC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein ZXDC isoform X2
translation: MDLPALLAARSPPPNPSPARRRLLLLRGPEDGGSGPGRGEARAAAAGPGPSPPPLEDGGESFVVLLEVPRSAAAEAPERREAESDFGTSPAGGPQQGPSGSAAAPGPSAALAGTVTISSQDLLVRFDHGVFTLAAAPPPPGPPAPPGDEAASPAEGRRGPPAPGPSAPGYRCPEPQCTLSFAKKHQLKVHLLTHGSSQGRRPFKCPLDGCGWAFTTSYKLKRHLQSHDKLRPFDCPVGGCGKKFTTVYNLKAHMKGHEQENLFKCEVCAERFPTHAKLSSHQRSHFEPERPYKCDFPGCEKTFITVSALFSHNRAHFREQELFSCSFPGCSKQYDKACRLKIHLRSHTGERPFICDSDSCGWTFTSMSKLLRHKRKHDDDRRFTCPVEGCGKSFTRAEHLKGHSITHLGTKPFECPVEGCCARFSARSSLYIHSKKHLQDVAAPKSRCPVSSCNRLFTSKHSMKAHVVRQHSRHPDIFPQLGAPSSLPLSSELGSPGQSELNNIDLAALFSDAPADGSGVAGASDEALTSGILTIDVTSVSSSLGGNLPANNSSLGPVDPLVLVAHSDIPPSLDSPVVLGTAATVLQQSNFNMDDVQTVSAGALGCLVALPVKNLSQDPHDLTSSSKLAVNTTTTLTSSSTPQGNTCIPELLELPAPIKVEPDSSPGPDAVGQQERSRGVPRPVFSSPPEKHSPQKDTGLSAGTGTFYLLCDVGLPRFSEHRWCVVNGLQESGGSARTDSRAIQLAKKKKQKGTGSNAGALGSIQRRMKDNKVIPIHLHASQSSWLCGNLVLSGGLPGPASAAWLQCVQVQLLKDDPSGEGVLPLVLGPQPSTSHPLFAIGLPVCVLQEVLPAAEGAAGSEDMHGTGSTVNLRNLQ
SIO_010081: ZXDC
subclass of: SO_0000673
so part of: ZXDC
location: join(3202646..3202678,3202739..3203597,3206008..3206160,3206256..3206334,3207283..3207413,3212024..3212194,3215933..3216633,3217789..3217851,3218507..3218591,3238747..3238913,3241223..3241324,3251670..3251756)
location: region:3202646-3251756:1
so has part: feature:3202646-3202678:1:exon
so has part: feature:3202739-3203597:1:exon
so has part: feature:3206008-3206160:1:exon
so has part: feature:3206256-3206334:1:exon
so has part: feature:3207283-3207413:1:exon
so has part: feature:3212024-3212194:1:exon
so has part: feature:3215933-3216633:1:exon
so has part: feature:3217789-3217851:1:exon
so has part: feature:3218507-3218591:1:exon
so has part: feature:3238747-3238913:1:exon
so has part: feature:3241223-3241324:1:exon
so has part: feature:3251670-3251756:1:exon

XP_032943810.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3202646-3202678:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3202739-3203597:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3206008-3206160:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3206256-3206334:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3207283-3207413:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3212024-3212194:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3215933-3216633:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3217789-3217851:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3218507-3218591:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3238747-3238913:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3241223-3241324:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3251670-3251756:1:exon

ZXDC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: ZXDC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein ZXDC isoform X6
translation: MDLPALLAARSPRGAQHGGGGGPGGLCRGPGPPPNPSPARRRLLLLRGPEDGGSGPGRGEARAAAAGPGPSPPPLEDGGESFVVLLEVPRSAAAEAPERREAESDFGTSPAGGPQQGPSGSAAAPGPSAALAGTVTISSQDLLVRFDHGVFTLAAAPPPPGPPAPPGDEAASPAEGRRGPPAPGPSAPGYRCPEPQCTLSFAKKHQLKVHLLTHGSSQGRRPFKCPLDGCGWAFTTSYKLKRHLQSHDKLRPFDCPVGGCGKKFTTVYNLKAHMKGHEQENLFKCEVCAERFPTHAKLSSHQRSHFEPERPYKCDFPGCEKTFITVSALFSHNRAHFREQELFSCSFPGCSKQYDKACRLKIHLRSHTGERPFICDSDSCGWTFTSMSKLLRHKRKHDDDRRFTCPVEGCGKSFTRAEHLKGHSITHLGTKPFECPVEGCCARFSARSSLYIHSKKHLQDVAAPKSRCPVSSCNRLFTSKHSMKAHVVRQHSRHPDIFPQLGAPSSLPLSSELGSPGQSELNNIDLAALFSDAPADGSGVAGASDEALTSGILTIDVTSVSSSLGGNLPANNSSLGPVDPLVLVAHSDIPPSLDSPVVLGTAATVLQQSNFNMDDVQTVSAGALGCLVALPVKNLSQDPHDLTSSSKLAVNTTTTLTSSSTPQGNTCIPELLELPAPIKVEPDSSPGPDAVGQQERSRGVPRPVFSSPPEKHSPQKDTGLSAGTGTFYLLCDVGLPRFSEHRWCVVNGLQESGGSARTDSRAIQLAKKKKQKGTGSNAGGASCS
SIO_010081: ZXDC
subclass of: SO_0000673
so part of: ZXDC
location: join(3202646..3203597,3206008..3206160,3206256..3206334,3207283..3207413,3212024..3212194,3215933..3216633,3217789..3217851,3218507..3218591,3251670..3251689)
location: region:3202646-3251689:1
so has part: feature:3202646-3203597:1:exon
so has part: feature:3206008-3206160:1:exon
so has part: feature:3206256-3206334:1:exon
so has part: feature:3207283-3207413:1:exon
so has part: feature:3212024-3212194:1:exon
so has part: feature:3215933-3216633:1:exon
so has part: feature:3217789-3217851:1:exon
so has part: feature:3218507-3218591:1:exon
so has part: feature:3251670-3251689:1:exon

XP_032943814.1
type: Protein
SIO_000068: ncbiprotein

position:3251689:1
position: 3251689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3202646-3203597:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3206008-3206160:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3206256-3206334:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3207283-3207413:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3212024-3212194:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3215933-3216633:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3217789-3217851:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3218507-3218591:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3251670-3251689:1:exon

ZXDC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: ZXDC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein ZXDC isoform X7
translation: MDLPALLAARSPRGAQHGGGGGPGGLCRGPGPPPNPSPARRRLLLLRGPEDGGSGPGRGEARAAAAGPGPSPPPLEDGGESFVVLLEVPRSAAAEAPERREAESDFGTSPAGGPQQGPSGSAAAPGPSAALAGTVTISSQDLLVRFDHGVFTLAAAPPPPGPPAPPGDEAASPAEGRRGPPAPGPSAPGYRCPEPQCTLSFAKKHQLKVHLLTHGSSQGRRPFKCPLDGCGWAFTTSYKLKRHLQSHDKLRPFDCPVGGCGKKFTTVYNLKAHMKGHEQENLFKCEVCAERFPTHAKLSSHQRSHFEPERPYKCDFPGCEKTFITVSALFSHNRAHFREQELFSCSFPGCSKQYDKACRLKIHLRSHTGERPFICDSDSCGWTFTSMSKLLRHKRKHDDDRRFTCPVEGCGKSFTRAEHLKGHSITHLGTKPFECPVEGCCARFSARSSLYIHSKKHLQDVAAPKSRCPVSSCNRLFTSKHSMKAHVVRQHSRHPDIFPQLGAPSSLPLSSELGSPGQSELNNIDLAALFSDAPADGSGVAGASDEALTSGILTIDVTSVSSSLGGNLPANNSSLGPVDPLVLVAHSDIPPSLDSPVVLGTAATVLQQSNFNMDDVQTVSAGALGCLVALPVKNLSQDPHDLTSSSKLAVNTTTTLTSSSTPQGNTCIPELLELPAPIKVEPDSSPGPDAVGQQERSRGVPRPVFSSPPEKHSPQKDTGLSAGTGTFYLESGGSARTDSRAIQLAKKKKQKGTGSNAGGASCS
SIO_010081: ZXDC
subclass of: SO_0000673
so part of: ZXDC
location: join(3202646..3203597,3206008..3206160,3206256..3206334,3207283..3207413,3212024..3212194,3215933..3216633,3218507..3218591,3251670..3251689)
location: region:3202646-3251689:1
so has part: feature:3202646-3203597:1:exon
so has part: feature:3206008-3206160:1:exon
so has part: feature:3206256-3206334:1:exon
so has part: feature:3207283-3207413:1:exon
so has part: feature:3212024-3212194:1:exon
so has part: feature:3215933-3216633:1:exon
so has part: feature:3218507-3218591:1:exon
so has part: feature:3251670-3251689:1:exon

XP_032943815.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3202646-3203597:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3206008-3206160:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3206256-3206334:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3207283-3207413:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3212024-3212194:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3215933-3216633:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3218507-3218591:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3251670-3251689:1:exon

ZXDC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: ZXDC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein ZXDC isoform X4
translation: MDLPALLAARSPRGAQHGGGGGPGGLCRGPGPPPNPSPARRRLLLLRGPEDGGSGPGRGEARAAAAGPGPSPPPLEDGGESFVVLLEVPRSAAAEAPERREAESDFGTSPAGGPQQGPSGSAAAPGPSAALAGTVTISSQDLLVRFDHGVFTLAAAPPPPGPPAPPGDEAASPAEGRRGPPAPGPSAPGYRCPEPQCTLSFAKKHQLKVHLLTHGSSQGRRPFKCPLDGCGWAFTTSYKLKRHLQSHDKLRPFDCPVGGCGKKFTTVYNLKAHMKGHEQENLFKCEVCAERFPTHAKLSSHQRSHFEPERPYKCDFPGCEKTFITVSALFSHNRAHFREQELFSCSFPGCSKQYDKACRLKIHLRSHTGERPFICDSDSCGWTFTSMSKLLRHKRKHDDDRRFTCPVEGCGKSFTRAEHLKGHSITHLGTKPFECPVEGCCARFSARSSLYIHSKKHLQDVAAPKSRCPVSSCNRLFTSKHSMKAHVVRQHSRHPDIFPQLGAPSSLPLSSELGSPGQSELNNIDLAALFSDAPADGSGVAGASDEALTSGILTIDVTSVSSSLGGNLPANNSSLGPVDPLVLVAHSDIPPSLDSPVVLGTAATVLQQSNFNMDDVQTVSAGALGCLVALPVKNLSQDPHDLTSSSKLAVNTTTTLTSSSTPQGNTCIPELLELPAPIKVEPDSSPGPDAVGQQERSRGVPRPVFSSPPEKHSPQKDTGLSAGTGTFYLLCDVGLPRFSEHRWCVVNGLQESGGSARTDSRAIQLAKKKKQKGTGSNAGALGSIQRRMKDNKVIPIHLHASQSSWLCGNLVLSGGLPGPASAAWLQCVQVQLLKDDPSGEGVLPLVLGPQPSTSHPLFAIGLPVCVLQFQVHKTK
SIO_010081: ZXDC
subclass of: SO_0000673
so part of: ZXDC
location: join(3202646..3203597,3206008..3206160,3206256..3206334,3207283..3207413,3212024..3212194,3215933..3216633,3217789..3217851,3218507..3218591,3238747..3238913,3241223..3241324,3241762..3241785)
location: region:3202646-3241785:1
so has part: feature:3202646-3203597:1:exon
so has part: feature:3206008-3206160:1:exon
so has part: feature:3206256-3206334:1:exon
so has part: feature:3207283-3207413:1:exon
so has part: feature:3212024-3212194:1:exon
so has part: feature:3215933-3216633:1:exon
so has part: feature:3217789-3217851:1:exon
so has part: feature:3218507-3218591:1:exon
so has part: feature:3238747-3238913:1:exon
so has part: feature:3241223-3241324:1:exon
so has part: feature:3241762-3241785:1:exon

XP_032943812.1
type: Protein
SIO_000068: ncbiprotein

position:3241785:1
position: 3241785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3202646-3203597:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3206008-3206160:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3206256-3206334:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3207283-3207413:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3212024-3212194:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3215933-3216633:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3217789-3217851:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3218507-3218591:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3238747-3238913:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3241223-3241324:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3241762-3241785:1:exon

ZXDC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: ZXDC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein ZXDC isoform X8
translation: MDLPALLAARSPRGAQHGGGGGPGGLCRGPGPPPNPSPARRRLLLLRGPEDGGSGPGRGEARAAAAGPGPSPPPLEDGGESFVVLLEVPRSAAAEAPERREAESDFGTSPAGGPQQGPSGSAAAPGPSAALAGTVTISSQDLLVRFDHGVFTLAAAPPPPGPPAPPGDEAASPAEGRRGPPAPGPSAPGYRCPEPQCTLSFAKKHQLKVHLLTHGSSQGRRPFKCPLDGCGWAFTTSYKLKRHLQSHDKLRPFDCPVGGCGKKFTTVYNLKAHMKGHEQENLFKCEVCAERFPTHAKLSSHQRSHFEPERPYKCDFPGCEKTFITVSALFSHNRAHFREQELFSCSFPGCSKQYDKACRLKIHLRSHTGERPFICDSDSCGWTFTSMSKLLRHKRKHDDDRRFTCPVEGCGKSFTRAEHLKGHSITHLGTKPFECPVEGCCARFSARSSLYIHSKKHLQDVAAPKSRCPVSSCNRLFTSKHSMKAHVVRQHSRHPDIFPQLGAPSSLPLSSELGSPGQSELNNIDLAALFSDAPADGSGVAGASDEALTSGILTIDVTSVSSSLGGNLPANNSSLGPVDPLVLVAHSDIPPSLDSPVVLGTAATVLQQSNFNMDDVQTVSAGALGCLVALPVKNLSQDPHDLTSSSKLAVNTTTTLTSSSTPQGNTCIPELLELPAPIKVEPDSSPGPDAVGQQERSRGVPRPVFSSPPEKHSPQKDTGLSAGTGTFYLEPWGQFRGE
SIO_010081: ZXDC
subclass of: SO_0000673
so part of: ZXDC
location: join(3202646..3203597,3206008..3206160,3206256..3206334,3207283..3207413,3212024..3212194,3215933..3216633,3238747..3238776)
location: region:3202646-3238776:1
so has part: feature:3202646-3203597:1:exon
so has part: feature:3206008-3206160:1:exon
so has part: feature:3206256-3206334:1:exon
so has part: feature:3207283-3207413:1:exon
so has part: feature:3212024-3212194:1:exon
so has part: feature:3215933-3216633:1:exon
so has part: feature:3238747-3238776:1:exon

XP_032943816.1
type: Protein
SIO_000068: ncbiprotein

position:3238776:1
position: 3238776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3202646-3203597:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3206008-3206160:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3206256-3206334:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3207283-3207413:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3212024-3212194:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3215933-3216633:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3238747-3238776:1:exon

CFAP100
type: Gene
subclass of: SO_0000704
RO_0002162: 59479
gene: CFAP100
note: cilia and flagella associated protein 100; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3253654..3325807)
location: region:3253654-3325807:-1
so has part: feature:3253654-3325807:-1:exon
subclass of: SO_0000010

117011993
type: Gene
SIO_000068: ncbigene

position:3253654:-1
position: 3253654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3325807:-1
position: 3325807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3253654-3325807:-1:exon

CFAP100
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: CFAP100
product: cilia and flagella associated protein 100, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033087928.1
SIO_010081: CFAP100
subclass of: SO_0000673
so part of: CFAP100
location: complement(join(3253654..3253859,3254809..3254908,3255981..3256186,3257354..3257489,3272822..3272973,3273097..3273145,3278187..3278313,3278390..3278422,3278755..3278936,3279406..3279486,3279704..3279867,3279948..3280015,3281626..3281818,3284069..3284169,3324558..3324687,3325653..3325807))
location: region:3253654-3325807:-1
so has part: feature:3325653-3325807:-1:exon
so has part: feature:3324558-3324687:-1:exon
so has part: feature:3284069-3284169:-1:exon
so has part: feature:3281626-3281818:-1:exon
so has part: feature:3279948-3280015:-1:exon
so has part: feature:3279704-3279867:-1:exon
so has part: feature:3279406-3279486:-1:exon
so has part: feature:3278755-3278936:-1:exon
so has part: feature:3278390-3278422:-1:exon
so has part: feature:3278187-3278313:-1:exon
so has part: feature:3273097-3273145:-1:exon
so has part: feature:3272822-3272973:-1:exon
so has part: feature:3257354-3257489:-1:exon
so has part: feature:3255981-3256186:-1:exon
so has part: feature:3254809-3254908:-1:exon
so has part: feature:3253654-3253859:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3325653-3325807:-1:exon

position:3325653:-1
position: 3325653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3324558-3324687:-1:exon

position:3324558:-1
position: 3324558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3324687:-1
position: 3324687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3284069-3284169:-1:exon

position:3284069:-1
position: 3284069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3284169:-1
position: 3284169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3281626-3281818:-1:exon

position:3281626:-1
position: 3281626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3281818:-1
position: 3281818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3279948-3280015:-1:exon

position:3279948:-1
position: 3279948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3280015:-1
position: 3280015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3279704-3279867:-1:exon

position:3279704:-1
position: 3279704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3279867:-1
position: 3279867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3279406-3279486:-1:exon

position:3279406:-1
position: 3279406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3279486:-1
position: 3279486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3278755-3278936:-1:exon

position:3278755:-1
position: 3278755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3278936:-1
position: 3278936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3278390-3278422:-1:exon

position:3278390:-1
position: 3278390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3278422:-1
position: 3278422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3278187-3278313:-1:exon

position:3278187:-1
position: 3278187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3278313:-1
position: 3278313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3273097-3273145:-1:exon

position:3273097:-1
position: 3273097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3273145:-1
position: 3273145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3272822-3272973:-1:exon

position:3272822:-1
position: 3272822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3272973:-1
position: 3272973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3257354-3257489:-1:exon

position:3257354:-1
position: 3257354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3257489:-1
position: 3257489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3255981-3256186:-1:exon

position:3255981:-1
position: 3255981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3256186:-1
position: 3256186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3254809-3254908:-1:exon

position:3254809:-1
position: 3254809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3254908:-1
position: 3254908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3253654-3253859:-1:exon

position:3253859:-1
position: 3253859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CFAP100
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: CFAP100
product: cilia and flagella associated protein 100, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_033087929.1
SIO_010081: CFAP100
subclass of: SO_0000673
so part of: CFAP100
location: complement(join(3253654..3253859,3254809..3254908,3255981..3256186,3257354..3257489,3278187..3278313,3278390..3278422,3278755..3278936,3279406..3279486,3279704..3279867,3279948..3280015,3281626..3281818,3284069..3284169,3290602..3290676,3324558..3324687,3325653..3325806))
location: region:3253654-3325806:-1
so has part: feature:3325653-3325806:-1:exon
so has part: feature:3324558-3324687:-1:exon
so has part: feature:3290602-3290676:-1:exon
so has part: feature:3284069-3284169:-1:exon
so has part: feature:3281626-3281818:-1:exon
so has part: feature:3279948-3280015:-1:exon
so has part: feature:3279704-3279867:-1:exon
so has part: feature:3279406-3279486:-1:exon
so has part: feature:3278755-3278936:-1:exon
so has part: feature:3278390-3278422:-1:exon
so has part: feature:3278187-3278313:-1:exon
so has part: feature:3257354-3257489:-1:exon
so has part: feature:3255981-3256186:-1:exon
so has part: feature:3254809-3254908:-1:exon
so has part: feature:3253654-3253859:-1:exon

position:3325806:-1
position: 3325806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3325653-3325806:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3324558-3324687:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3290602-3290676:-1:exon

position:3290602:-1
position: 3290602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3290676:-1
position: 3290676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3284069-3284169:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3281626-3281818:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3279948-3280015:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3279704-3279867:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3279406-3279486:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3278755-3278936:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3278390-3278422:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3278187-3278313:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3257354-3257489:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3255981-3256186:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3254809-3254908:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3253654-3253859:-1:exon

CFAP100
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: CFAP100
product: cilia and flagella associated protein 100, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_033087927.1
SIO_010081: CFAP100
subclass of: SO_0000673
so part of: CFAP100
location: complement(join(3253654..3253859,3254809..3254908,3255981..3256186,3257354..3257489,3272822..3272973,3273097..3273145,3278187..3278313,3278390..3278422,3278755..3278936,3279406..3279486,3279704..3279867,3279948..3280015,3281626..3281818,3284069..3284169,3290602..3290676,3324558..3324687,3325653..3325806))
location: region:3253654-3325806:-1
so has part: feature:3325653-3325806:-1:exon
so has part: feature:3324558-3324687:-1:exon
so has part: feature:3290602-3290676:-1:exon
so has part: feature:3284069-3284169:-1:exon
so has part: feature:3281626-3281818:-1:exon
so has part: feature:3279948-3280015:-1:exon
so has part: feature:3279704-3279867:-1:exon
so has part: feature:3279406-3279486:-1:exon
so has part: feature:3278755-3278936:-1:exon
so has part: feature:3278390-3278422:-1:exon
so has part: feature:3278187-3278313:-1:exon
so has part: feature:3273097-3273145:-1:exon
so has part: feature:3272822-3272973:-1:exon
so has part: feature:3257354-3257489:-1:exon
so has part: feature:3255981-3256186:-1:exon
so has part: feature:3254809-3254908:-1:exon
so has part: feature:3253654-3253859:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3325653-3325806:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3324558-3324687:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3290602-3290676:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3284069-3284169:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3281626-3281818:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3279948-3280015:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3279704-3279867:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3279406-3279486:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3278755-3278936:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3278390-3278422:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3278187-3278313:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3273097-3273145:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3272822-3272973:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3257354-3257489:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3255981-3256186:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3254809-3254908:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3253654-3253859:-1:exon

CFAP100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: CFAP100
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cilia- and flagella-associated protein 100 isoform X2
translation: MPTVSKDMTYNMSLIVPGRSANPFHMSGDMDFFLLRDQERNKSLSEREQKKTLRVHEKMTYSSKVSAKHTSLRRQLQLEDDMEDQEARAEAEQLQAFHDNMAWKLSMTKEKKGESDNINKYINQKRQMFLIQYALDMKRSEIQRLEMLVTKEEAELERAERSLEKDSALFDKFLRENDRRSVQALKAAEKETKAKVAKITEIRDLTIQIRNIKSEISSFEDILQHYKVYKNFLHKLSPKEWLEEQEKKHLALKKAKEVTKAPKEYTLFSTQGDKGPGIKGKKVSKESQSPRKSWKVLQVIRAGQILSGAISLQPGKQPSVSGWLDPKGSSSALPVQEDSNSDGEELELYFTEPQQLLDIFTELEEQNLSLIQNTQEMEETLEELSFTMKNTQLLMDREVNQLKQLITTLMMSITKEEETAAELELKARVFHFGEYKGAQEDKVLESLNHKVLAVYRNCVGTQQESNLGTVQMLTIIEQQLDELLENLERVPHVKIEQAEKAKEKEQRQRIREEKAKMQKQLQEERLQRAQARAQAQAEIKKKRGRRLVCRSKPPALKTTEELKHKSLDKDKQEQLFFFT
SIO_010081: CFAP100
subclass of: SO_0000673
so part of: CFAP100
location: complement(join(3253746..3253859,3254809..3254908,3255981..3256186,3257354..3257489,3272822..3272973,3273097..3273145,3278187..3278313,3278390..3278422,3278755..3278936,3279406..3279486,3279704..3279867,3279948..3280015,3281626..3281818,3284069..3284169,3324558..3324591))
location: region:3253746-3324591:-1
so has part: feature:3324558-3324591:-1:exon
so has part: feature:3284069-3284169:-1:exon
so has part: feature:3281626-3281818:-1:exon
so has part: feature:3279948-3280015:-1:exon
so has part: feature:3279704-3279867:-1:exon
so has part: feature:3279406-3279486:-1:exon
so has part: feature:3278755-3278936:-1:exon
so has part: feature:3278390-3278422:-1:exon
so has part: feature:3278187-3278313:-1:exon
so has part: feature:3273097-3273145:-1:exon
so has part: feature:3272822-3272973:-1:exon
so has part: feature:3257354-3257489:-1:exon
so has part: feature:3255981-3256186:-1:exon
so has part: feature:3254809-3254908:-1:exon
so has part: feature:3253746-3253859:-1:exon

XP_032943819.1
type: Protein
SIO_000068: ncbiprotein

position:3253746:-1
position: 3253746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3324591:-1
position: 3324591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3324558-3324591:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3284069-3284169:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3281626-3281818:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3279948-3280015:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3279704-3279867:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3279406-3279486:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3278755-3278936:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3278390-3278422:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3278187-3278313:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3273097-3273145:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3272822-3272973:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3257354-3257489:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3255981-3256186:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3254809-3254908:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3253746-3253859:-1:exon

CFAP100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: CFAP100
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cilia- and flagella-associated protein 100 isoform X3
translation: MPTVSKDMTYNKNSRESTDNSSSITEEKKKHGKKGKVSLIVPGRSANPFHMSGDMDFFLLRDQERNKSLSEREQKKTLRVHEKMTYSSKVSAKHTSLRRQLQLEDDMEDQEARAEAEQLQAFHDNMAWKLSMTKEKKGESDNINKYINQKRQMFLIQYALDMKRSEIQRLEMLVTKEEAELERAERSLEKDSALFDKFLRENDRRSVQALKAAEKETKAKVAKITEIRDLTIQIRNIKSEISSFEDILQHYKVYKNFLHKLSPKEWLEEQEKKHLALKKAKEVTKAPKEYTLFSTQGDKGPGIKGKKVSKESQSPRKSWKVLQVIRAGQILSGAISLQPGKQPSVSGWLDPKGDREVNQLKQLITTLMMSITKEEETAAELELKARVFHFGEYKGAQEDKVLESLNHKVLAVYRNCVGTQQESNLGTVQMLTIIEQQLDELLENLERVPHVKIEQAEKAKEKEQRQRIREEKAKMQKQLQEERLQRAQARAQAQAEIKKKRGRRLVCRSKPPALKTTEELKHKSLDKDKQEQLFFFT
SIO_010081: CFAP100
subclass of: SO_0000673
so part of: CFAP100
location: complement(join(3253746..3253859,3254809..3254908,3255981..3256186,3257354..3257489,3278187..3278313,3278390..3278422,3278755..3278936,3279406..3279486,3279704..3279867,3279948..3280015,3281626..3281818,3284069..3284169,3290602..3290676,3324558..3324591))
location: region:3253746-3324591:-1
so has part: feature:3324558-3324591:-1:exon
so has part: feature:3290602-3290676:-1:exon
so has part: feature:3284069-3284169:-1:exon
so has part: feature:3281626-3281818:-1:exon
so has part: feature:3279948-3280015:-1:exon
so has part: feature:3279704-3279867:-1:exon
so has part: feature:3279406-3279486:-1:exon
so has part: feature:3278755-3278936:-1:exon
so has part: feature:3278390-3278422:-1:exon
so has part: feature:3278187-3278313:-1:exon
so has part: feature:3257354-3257489:-1:exon
so has part: feature:3255981-3256186:-1:exon
so has part: feature:3254809-3254908:-1:exon
so has part: feature:3253746-3253859:-1:exon

XP_032943820.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3324558-3324591:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3290602-3290676:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3284069-3284169:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3281626-3281818:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3279948-3280015:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3279704-3279867:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3279406-3279486:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3278755-3278936:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3278390-3278422:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3278187-3278313:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3257354-3257489:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3255981-3256186:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3254809-3254908:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3253746-3253859:-1:exon

CFAP100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: CFAP100
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cilia- and flagella-associated protein 100 isoform X1
translation: MPTVSKDMTYNKNSRESTDNSSSITEEKKKHGKKGKVSLIVPGRSANPFHMSGDMDFFLLRDQERNKSLSEREQKKTLRVHEKMTYSSKVSAKHTSLRRQLQLEDDMEDQEARAEAEQLQAFHDNMAWKLSMTKEKKGESDNINKYINQKRQMFLIQYALDMKRSEIQRLEMLVTKEEAELERAERSLEKDSALFDKFLRENDRRSVQALKAAEKETKAKVAKITEIRDLTIQIRNIKSEISSFEDILQHYKVYKNFLHKLSPKEWLEEQEKKHLALKKAKEVTKAPKEYTLFSTQGDKGPGIKGKKVSKESQSPRKSWKVLQVIRAGQILSGAISLQPGKQPSVSGWLDPKGSSSALPVQEDSNSDGEELELYFTEPQQLLDIFTELEEQNLSLIQNTQEMEETLEELSFTMKNTQLLMDREVNQLKQLITTLMMSITKEEETAAELELKARVFHFGEYKGAQEDKVLESLNHKVLAVYRNCVGTQQESNLGTVQMLTIIEQQLDELLENLERVPHVKIEQAEKAKEKEQRQRIREEKAKMQKQLQEERLQRAQARAQAQAEIKKKRGRRLVCRSKPPALKTTEELKHKSLDKDKQEQLFFFT
SIO_010081: CFAP100
subclass of: SO_0000673
so part of: CFAP100
location: complement(join(3253746..3253859,3254809..3254908,3255981..3256186,3257354..3257489,3272822..3272973,3273097..3273145,3278187..3278313,3278390..3278422,3278755..3278936,3279406..3279486,3279704..3279867,3279948..3280015,3281626..3281818,3284069..3284169,3290602..3290676,3324558..3324591))
location: region:3253746-3324591:-1
so has part: feature:3324558-3324591:-1:exon
so has part: feature:3290602-3290676:-1:exon
so has part: feature:3284069-3284169:-1:exon
so has part: feature:3281626-3281818:-1:exon
so has part: feature:3279948-3280015:-1:exon
so has part: feature:3279704-3279867:-1:exon
so has part: feature:3279406-3279486:-1:exon
so has part: feature:3278755-3278936:-1:exon
so has part: feature:3278390-3278422:-1:exon
so has part: feature:3278187-3278313:-1:exon
so has part: feature:3273097-3273145:-1:exon
so has part: feature:3272822-3272973:-1:exon
so has part: feature:3257354-3257489:-1:exon
so has part: feature:3255981-3256186:-1:exon
so has part: feature:3254809-3254908:-1:exon
so has part: feature:3253746-3253859:-1:exon

XP_032943818.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3324558-3324591:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3290602-3290676:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3284069-3284169:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3281626-3281818:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3279948-3280015:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3279704-3279867:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3279406-3279486:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3278755-3278936:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3278390-3278422:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3278187-3278313:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3273097-3273145:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3272822-3272973:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3257354-3257489:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3255981-3256186:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3254809-3254908:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3253746-3253859:-1:exon

KLF15
type: Gene
subclass of: SO_0000704
RO_0002162: 59479
gene: KLF15
note: KLF transcription factor 15; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3389785..3449392
location: region:3389785-3449392:1
so has part: feature:3389785-3449392:1:exon
subclass of: SO_0000010

117038760
type: Gene
SIO_000068: ncbigene

position:3389785:1
position: 3389785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3449392:1
position: 3449392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3389785-3449392:1:exon

KLF15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: KLF15
product: KLF transcription factor 15, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033135705.1
SIO_010081: KLF15
subclass of: SO_0000673
so part of: KLF15
location: join(3389785..3389978,3394316..3395413,3419877..3419970,3423947..3424027,3428147..3428237,3443175..3443267,3449091..3449392)
location: region:3389785-3449392:1
so has part: feature:3389785-3389978:1:exon
so has part: feature:3394316-3395413:1:exon
so has part: feature:3419877-3419970:1:exon
so has part: feature:3423947-3424027:1:exon
so has part: feature:3428147-3428237:1:exon
so has part: feature:3443175-3443267:1:exon
so has part: feature:3449091-3449392:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3389785-3389978:1:exon

position:3389978:1
position: 3389978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3394316-3395413:1:exon

position:3394316:1
position: 3394316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3395413:1
position: 3395413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3419877-3419970:1:exon

position:3419877:1
position: 3419877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3419970:1
position: 3419970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3423947-3424027:1:exon

position:3423947:1
position: 3423947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3424027:1
position: 3424027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3428147-3428237:1:exon

position:3428147:1
position: 3428147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3428237:1
position: 3428237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3443175-3443267:1:exon

position:3443175:1
position: 3443175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3443267:1
position: 3443267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3449091-3449392:1:exon

position:3449091:1
position: 3449091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

KLF15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: KLF15
product: KLF transcription factor 15, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033135704.1
SIO_010081: KLF15
subclass of: SO_0000673
so part of: KLF15
location: join(3389785..3389978,3394316..3395413,3419877..3419970,3423947..3424027,3428147..3428237,3443175..3443256,3449091..3449392)
location: region:3389785-3449392:1
so has part: feature:3389785-3389978:1:exon
so has part: feature:3394316-3395413:1:exon
so has part: feature:3419877-3419970:1:exon
so has part: feature:3423947-3424027:1:exon
so has part: feature:3428147-3428237:1:exon
so has part: feature:3443175-3443256:1:exon
so has part: feature:3449091-3449392:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3389785-3389978:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3394316-3395413:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3419877-3419970:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3423947-3424027:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3428147-3428237:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3443175-3443256:1:exon

position:3443256:1
position: 3443256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3449091-3449392:1:exon

KLF15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: KLF15
product: KLF transcription factor 15, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033135706.1
SIO_010081: KLF15
subclass of: SO_0000673
so part of: KLF15
location: join(3389787..3389978,3394316..3395413,3419877..3419970,3423947..3424027,3428147..3428237,3449091..3449391)
location: region:3389787-3449391:1
so has part: feature:3389787-3389978:1:exon
so has part: feature:3394316-3395413:1:exon
so has part: feature:3419877-3419970:1:exon
so has part: feature:3423947-3424027:1:exon
so has part: feature:3428147-3428237:1:exon
so has part: feature:3449091-3449391:1:exon

position:3389787:1
position: 3389787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3449391:1
position: 3449391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3389787-3389978:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3394316-3395413:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3419877-3419970:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3423947-3424027:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3428147-3428237:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3449091-3449391:1:exon

KLF15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: KLF15
product: KLF transcription factor 15, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033135707.1
SIO_010081: KLF15
subclass of: SO_0000673
so part of: KLF15
location: join(3389788..3389978,3394316..3395413,3419877..3419970,3423947..3424027,3443175..3443267,3449091..3449391)
location: region:3389788-3449391:1
so has part: feature:3389788-3389978:1:exon
so has part: feature:3394316-3395413:1:exon
so has part: feature:3419877-3419970:1:exon
so has part: feature:3423947-3424027:1:exon
so has part: feature:3443175-3443267:1:exon
so has part: feature:3449091-3449391:1:exon

position:3389788:1
position: 3389788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3389788-3389978:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3394316-3395413:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3419877-3419970:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3423947-3424027:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3443175-3443267:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3449091-3449391:1:exon

KLF15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: KLF15
product: KLF transcription factor 15, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033135708.1
SIO_010081: KLF15
subclass of: SO_0000673
so part of: KLF15
location: join(3389789..3389978,3394316..3395413,3419877..3419970,3428147..3428237,3449091..3449390)
location: region:3389789-3449390:1
so has part: feature:3389789-3389978:1:exon
so has part: feature:3394316-3395413:1:exon
so has part: feature:3419877-3419970:1:exon
so has part: feature:3428147-3428237:1:exon
so has part: feature:3449091-3449390:1:exon

position:3389789:1
position: 3389789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3449390:1
position: 3449390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3389789-3389978:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3394316-3395413:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3419877-3419970:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3428147-3428237:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3449091-3449390:1:exon

KLF15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: KLF15
product: KLF transcription factor 15, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033135709.1
SIO_010081: KLF15
subclass of: SO_0000673
so part of: KLF15
location: join(3389790..3389978,3394316..3395413,3419877..3419970,3423947..3424027,3449091..3449141)
location: region:3389790-3449141:1
so has part: feature:3389790-3389978:1:exon
so has part: feature:3394316-3395413:1:exon
so has part: feature:3419877-3419970:1:exon
so has part: feature:3423947-3424027:1:exon
so has part: feature:3449091-3449141:1:exon

position:3389790:1
position: 3389790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3449141:1
position: 3449141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3389790-3389978:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3394316-3395413:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3419877-3419970:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3423947-3424027:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3449091-3449141:1:exon

KLF15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: KLF15
product: KLF transcription factor 15, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_033135711.1
SIO_010081: KLF15
subclass of: SO_0000673
so part of: KLF15
location: join(3389791..3389978,3394316..3395413,3443175..3443267,3449091..3449388)
location: region:3389791-3449388:1
so has part: feature:3389791-3389978:1:exon
so has part: feature:3394316-3395413:1:exon
so has part: feature:3443175-3443267:1:exon
so has part: feature:3449091-3449388:1:exon

position:3389791:1
position: 3389791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3449388:1
position: 3449388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3389791-3389978:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3394316-3395413:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3443175-3443267:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3449091-3449388:1:exon

KLF15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: KLF15
product: KLF transcription factor 15, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033135712.1
SIO_010081: KLF15
subclass of: SO_0000673
so part of: KLF15
location: join(3389792..3389978,3394316..3395413,3443175..3443256,3449091..3449388)
location: region:3389792-3449388:1
so has part: feature:3389792-3389978:1:exon
so has part: feature:3394316-3395413:1:exon
so has part: feature:3443175-3443256:1:exon
so has part: feature:3449091-3449388:1:exon

position:3389792:1
position: 3389792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3389792-3389978:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3394316-3395413:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3443175-3443256:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3449091-3449388:1:exon

KLF15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: KLF15
product: KLF transcription factor 15, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_033135713.1
SIO_010081: KLF15
subclass of: SO_0000673
so part of: KLF15
location: join(3389793..3389978,3394316..3395413,3449091..3449386)
location: region:3389793-3449386:1
so has part: feature:3389793-3389978:1:exon
so has part: feature:3394316-3395413:1:exon
so has part: feature:3449091-3449386:1:exon

position:3389793:1
position: 3389793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3449386:1
position: 3449386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3389793-3389978:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3394316-3395413:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3449091-3449386:1:exon

KLF15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: KLF15
product: KLF transcription factor 15, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_033135714.1
SIO_010081: KLF15
subclass of: SO_0000673
so part of: KLF15
location: join(3389794..3389978,3394316..3395413,3428147..3428220)
location: region:3389794-3428220:1
so has part: feature:3389794-3389978:1:exon
so has part: feature:3394316-3395413:1:exon
so has part: feature:3428147-3428220:1:exon

position:3389794:1
position: 3389794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3428220:1
position: 3428220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3389794-3389978:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3394316-3395413:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3428147-3428220:1:exon

KLF15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: KLF15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Krueppel-like factor 15 isoform X1
translation: MVDHLLPVDENFSSPKCPVGYLGNRLVGRAYHMLPSPLSEDDSDASSLCSCASPDSQALCSCYSGGLGTEGQDNILDFLLSQATLGSSGSGSIGASSGPVTWEAWRREPVPVKGEHFCFPEFAVSDLDDVPRPFQPTLEEIEEFLEENMELGVKEAPENNSKELEACGQLSAAPHRSHVHPGSGGRERCAPPPAGASAGDTQGPSGGPAPDGPVPLLLQIQPVQVKQESGTEPASPGQAPESVKVAQLLVNIQGQTFALLPQVVPSSNLNLPSKFVRIAPVPIAAKPIGSGPLGPGPAGLLMGQKFPKNPAAELIKMHKCTFPGCSKMYTKSSHLKAHLRRHTGEKPFACTWPGCGWRNDLLKTLIDNADSYLKDERGHYQVGYAITSMQNNNPPKMPHPNLQNLEICSRKKDSLQGDCRLTSVSTQTRGIRDGSRPQQPAALDYLDLRGLALSPHLEQLCKSPAPEAPTSWLRCDAWICDSQLATLRSQA
SIO_010081: KLF15
subclass of: SO_0000673
so part of: KLF15
location: join(3394341..3395413,3419877..3419970,3423947..3424027,3428147..3428237,3443175..3443256,3449091..3449145)
location: region:3394341-3449145:1
so has part: feature:3394341-3395413:1:exon
so has part: feature:3419877-3419970:1:exon
so has part: feature:3423947-3424027:1:exon
so has part: feature:3428147-3428237:1:exon
so has part: feature:3443175-3443256:1:exon
so has part: feature:3449091-3449145:1:exon

XP_032991595.1
type: Protein
SIO_000068: ncbiprotein

position:3394341:1
position: 3394341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3449145:1
position: 3449145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3394341-3395413:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3419877-3419970:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3423947-3424027:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3428147-3428237:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3443175-3443256:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3449091-3449145:1:exon

KLF15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: KLF15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Krueppel-like factor 15 isoform X8
translation: MVDHLLPVDENFSSPKCPVGYLGNRLVGRAYHMLPSPLSEDDSDASSLCSCASPDSQALCSCYSGGLGTEGQDNILDFLLSQATLGSSGSGSIGASSGPVTWEAWRREPVPVKGEHFCFPEFAVSDLDDVPRPFQPTLEEIEEFLEENMELGVKEAPENNSKELEACGQLSAAPHRSHVHPGSGGRERCAPPPAGASAGDTQGPSGGPAPDGPVPLLLQIQPVQVKQESGTEPASPGQAPESVKVAQLLVNIQGQTFALLPQVVPSSNLNLPSKFVRIAPVPIAAKPIGSGPLGPGPAGLLMGQKFPKNPAAELIKMHKCTFPGCSKMYTKSSHLKAHLRRHTGEKPFACTWPGCGWRSQRPGPVSPLGTTLQVTSTRGPHKLAEVCARCDAWICDSQLATLRSQA
SIO_010081: KLF15
subclass of: SO_0000673
so part of: KLF15
location: join(3394341..3395413,3443175..3443267,3449091..3449145)
location: region:3394341-3449145:1
so has part: feature:3394341-3395413:1:exon
so has part: feature:3443175-3443267:1:exon
so has part: feature:3449091-3449145:1:exon

XP_032991602.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3394341-3395413:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3443175-3443267:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3449091-3449145:1:exon

KLF15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: KLF15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Krueppel-like factor 15 isoform X10
translation: MVDHLLPVDENFSSPKCPVGYLGNRLVGRAYHMLPSPLSEDDSDASSLCSCASPDSQALCSCYSGGLGTEGQDNILDFLLSQATLGSSGSGSIGASSGPVTWEAWRREPVPVKGEHFCFPEFAVSDLDDVPRPFQPTLEEIEEFLEENMELGVKEAPENNSKELEACGQLSAAPHRSHVHPGSGGRERCAPPPAGASAGDTQGPSGGPAPDGPVPLLLQIQPVQVKQESGTEPASPGQAPESVKVAQLLVNIQGQTFALLPQVVPSSNLNLPSKFVRIAPVPIAAKPIGSGPLGPGPAGLLMGQKFPKNPAAELIKMHKCTFPGCSKMYTKSSHLKAHLRRHTGEKPFACTWPGCGWRCDAWICDSQLATLRSQA
SIO_010081: KLF15
subclass of: SO_0000673
so part of: KLF15
location: join(3394341..3395413,3449091..3449145)
location: region:3394341-3449145:1
so has part: feature:3394341-3395413:1:exon
so has part: feature:3449091-3449145:1:exon

XP_032991604.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3394341-3395413:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3449091-3449145:1:exon

KLF15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: KLF15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Krueppel-like factor 15 isoform X2
translation: MVDHLLPVDENFSSPKCPVGYLGNRLVGRAYHMLPSPLSEDDSDASSLCSCASPDSQALCSCYSGGLGTEGQDNILDFLLSQATLGSSGSGSIGASSGPVTWEAWRREPVPVKGEHFCFPEFAVSDLDDVPRPFQPTLEEIEEFLEENMELGVKEAPENNSKELEACGQLSAAPHRSHVHPGSGGRERCAPPPAGASAGDTQGPSGGPAPDGPVPLLLQIQPVQVKQESGTEPASPGQAPESVKVAQLLVNIQGQTFALLPQVVPSSNLNLPSKFVRIAPVPIAAKPIGSGPLGPGPAGLLMGQKFPKNPAAELIKMHKCTFPGCSKMYTKSSHLKAHLRRHTGEKPFACTWPGCGWRNDLLKTLIDNADSYLKDERGHYQVGYAITSMQNNNPPKMPHPNLQNLEICSRKKDSLQGDCRLTSVSTQTRGIRDGSRPQQPAALDYLDLRGLALSPHLEQLCKSPAPEAPTSWLRSVPDVMPGSVIANLQP
SIO_010081: KLF15
subclass of: SO_0000673
so part of: KLF15
location: join(3394341..3395413,3419877..3419970,3423947..3424027,3428147..3428237,3443175..3443267,3449091..3449131)
location: region:3394341-3449131:1
so has part: feature:3394341-3395413:1:exon
so has part: feature:3419877-3419970:1:exon
so has part: feature:3423947-3424027:1:exon
so has part: feature:3428147-3428237:1:exon
so has part: feature:3443175-3443267:1:exon
so has part: feature:3449091-3449131:1:exon

XP_032991596.1
type: Protein
SIO_000068: ncbiprotein

position:3449131:1
position: 3449131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3394341-3395413:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3419877-3419970:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3423947-3424027:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3428147-3428237:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3443175-3443267:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3449091-3449131:1:exon

KLF15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: KLF15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Krueppel-like factor 15 isoform X3
translation: MVDHLLPVDENFSSPKCPVGYLGNRLVGRAYHMLPSPLSEDDSDASSLCSCASPDSQALCSCYSGGLGTEGQDNILDFLLSQATLGSSGSGSIGASSGPVTWEAWRREPVPVKGEHFCFPEFAVSDLDDVPRPFQPTLEEIEEFLEENMELGVKEAPENNSKELEACGQLSAAPHRSHVHPGSGGRERCAPPPAGASAGDTQGPSGGPAPDGPVPLLLQIQPVQVKQESGTEPASPGQAPESVKVAQLLVNIQGQTFALLPQVVPSSNLNLPSKFVRIAPVPIAAKPIGSGPLGPGPAGLLMGQKFPKNPAAELIKMHKCTFPGCSKMYTKSSHLKAHLRRHTGEKPFACTWPGCGWRNDLLKTLIDNADSYLKDERGHYQVGYAITSMQNNNPPKMPHPNLQNLEICSRKKDSLQGDCRLTSVSTQTRGIRDGSRPQQPAALDYLDVMPGSVIANLQP
SIO_010081: KLF15
subclass of: SO_0000673
so part of: KLF15
location: join(3394341..3395413,3419877..3419970,3423947..3424027,3428147..3428237,3449091..3449131)
location: region:3394341-3449131:1
so has part: feature:3394341-3395413:1:exon
so has part: feature:3419877-3419970:1:exon
so has part: feature:3423947-3424027:1:exon
so has part: feature:3428147-3428237:1:exon
so has part: feature:3449091-3449131:1:exon

XP_032991597.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3394341-3395413:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3419877-3419970:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3423947-3424027:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3428147-3428237:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3449091-3449131:1:exon

KLF15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: KLF15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Krueppel-like factor 15 isoform X5
translation: MVDHLLPVDENFSSPKCPVGYLGNRLVGRAYHMLPSPLSEDDSDASSLCSCASPDSQALCSCYSGGLGTEGQDNILDFLLSQATLGSSGSGSIGASSGPVTWEAWRREPVPVKGEHFCFPEFAVSDLDDVPRPFQPTLEEIEEFLEENMELGVKEAPENNSKELEACGQLSAAPHRSHVHPGSGGRERCAPPPAGASAGDTQGPSGGPAPDGPVPLLLQIQPVQVKQESGTEPASPGQAPESVKVAQLLVNIQGQTFALLPQVVPSSNLNLPSKFVRIAPVPIAAKPIGSGPLGPGPAGLLMGQKFPKNPAAELIKMHKCTFPGCSKMYTKSSHLKAHLRRHTGEKPFACTWPGCGWRNDLLKTLIDNADSYLKDERGHYQVGYAITSMGDCRLTSVSTQTRGIRDGSRPQQPAALDYLDVMPGSVIANLQP
SIO_010081: KLF15
subclass of: SO_0000673
so part of: KLF15
location: join(3394341..3395413,3419877..3419970,3428147..3428237,3449091..3449131)
location: region:3394341-3449131:1
so has part: feature:3394341-3395413:1:exon
so has part: feature:3419877-3419970:1:exon
so has part: feature:3428147-3428237:1:exon
so has part: feature:3449091-3449131:1:exon

XP_032991599.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3394341-3395413:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3419877-3419970:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3428147-3428237:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3449091-3449131:1:exon

KLF15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: KLF15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Krueppel-like factor 15 isoform X6
translation: MVDHLLPVDENFSSPKCPVGYLGNRLVGRAYHMLPSPLSEDDSDASSLCSCASPDSQALCSCYSGGLGTEGQDNILDFLLSQATLGSSGSGSIGASSGPVTWEAWRREPVPVKGEHFCFPEFAVSDLDDVPRPFQPTLEEIEEFLEENMELGVKEAPENNSKELEACGQLSAAPHRSHVHPGSGGRERCAPPPAGASAGDTQGPSGGPAPDGPVPLLLQIQPVQVKQESGTEPASPGQAPESVKVAQLLVNIQGQTFALLPQVVPSSNLNLPSKFVRIAPVPIAAKPIGSGPLGPGPAGLLMGQKFPKNPAAELIKMHKCTFPGCSKMYTKSSHLKAHLRRHTGEKPFACTWPGCGWRNDLLKTLIDNADSYLKDERGHYQVGYAITSMQNNNPPKMPHPNLQNLEICSRKKDSLQM
SIO_010081: KLF15
subclass of: SO_0000673
so part of: KLF15
location: join(3394341..3395413,3419877..3419970,3423947..3424027,3449091..3449096)
location: region:3394341-3449096:1
so has part: feature:3394341-3395413:1:exon
so has part: feature:3419877-3419970:1:exon
so has part: feature:3423947-3424027:1:exon
so has part: feature:3449091-3449096:1:exon

XP_032991600.1
type: Protein
SIO_000068: ncbiprotein

position:3449096:1
position: 3449096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3394341-3395413:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3419877-3419970:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3423947-3424027:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3449091-3449096:1:exon

KLF15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: KLF15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Krueppel-like factor 15 isoform X9
translation: MVDHLLPVDENFSSPKCPVGYLGNRLVGRAYHMLPSPLSEDDSDASSLCSCASPDSQALCSCYSGGLGTEGQDNILDFLLSQATLGSSGSGSIGASSGPVTWEAWRREPVPVKGEHFCFPEFAVSDLDDVPRPFQPTLEEIEEFLEENMELGVKEAPENNSKELEACGQLSAAPHRSHVHPGSGGRERCAPPPAGASAGDTQGPSGGPAPDGPVPLLLQIQPVQVKQESGTEPASPGQAPESVKVAQLLVNIQGQTFALLPQVVPSSNLNLPSKFVRIAPVPIAAKPIGSGPLGPGPAGLLMGQKFPKNPAAELIKMHKCTFPGCSKMYTKSSHLKAHLRRHTGEKPFACTWPGCGWRSQRPGPVSPLGTTLQVTSTRGPHKLAEM
SIO_010081: KLF15
subclass of: SO_0000673
so part of: KLF15
location: join(3394341..3395413,3443175..3443256,3449091..3449096)
location: region:3394341-3449096:1
so has part: feature:3394341-3395413:1:exon
so has part: feature:3443175-3443256:1:exon
so has part: feature:3449091-3449096:1:exon

XP_032991603.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3394341-3395413:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3443175-3443256:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3449091-3449096:1:exon

KLF15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: KLF15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Krueppel-like factor 15 isoform X4
translation: MVDHLLPVDENFSSPKCPVGYLGNRLVGRAYHMLPSPLSEDDSDASSLCSCASPDSQALCSCYSGGLGTEGQDNILDFLLSQATLGSSGSGSIGASSGPVTWEAWRREPVPVKGEHFCFPEFAVSDLDDVPRPFQPTLEEIEEFLEENMELGVKEAPENNSKELEACGQLSAAPHRSHVHPGSGGRERCAPPPAGASAGDTQGPSGGPAPDGPVPLLLQIQPVQVKQESGTEPASPGQAPESVKVAQLLVNIQGQTFALLPQVVPSSNLNLPSKFVRIAPVPIAAKPIGSGPLGPGPAGLLMGQKFPKNPAAELIKMHKCTFPGCSKMYTKSSHLKAHLRRHTGEKPFACTWPGCGWRNDLLKTLIDNADSYLKDERGHYQVGYAITSMQNNNPPKMPHPNLQNLEICSRKKDSLQISEAWPCLPTWNNSASHQHQRPPQAG
SIO_010081: KLF15
subclass of: SO_0000673
so part of: KLF15
location: join(3394341..3395413,3419877..3419970,3423947..3424027,3443175..3443255)
location: region:3394341-3443255:1
so has part: feature:3394341-3395413:1:exon
so has part: feature:3419877-3419970:1:exon
so has part: feature:3423947-3424027:1:exon
so has part: feature:3443175-3443255:1:exon

XP_032991598.1
type: Protein
SIO_000068: ncbiprotein

position:3443255:1
position: 3443255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3394341-3395413:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3419877-3419970:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3423947-3424027:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3443175-3443255:1:exon

KLF15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: KLF15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Krueppel-like factor 15 isoform X11
translation: MVDHLLPVDENFSSPKCPVGYLGNRLVGRAYHMLPSPLSEDDSDASSLCSCASPDSQALCSCYSGGLGTEGQDNILDFLLSQATLGSSGSGSIGASSGPVTWEAWRREPVPVKGEHFCFPEFAVSDLDDVPRPFQPTLEEIEEFLEENMELGVKEAPENNSKELEACGQLSAAPHRSHVHPGSGGRERCAPPPAGASAGDTQGPSGGPAPDGPVPLLLQIQPVQVKQESGTEPASPGQAPESVKVAQLLVNIQGQTFALLPQVVPSSNLNLPSKFVRIAPVPIAAKPIGSGPLGPGPAGLLMGQKFPKNPAAELIKMHKCTFPGCSKMYTKSSHLKAHLRRHTGEKPFACTWPGCGWRATAD
SIO_010081: KLF15
subclass of: SO_0000673
so part of: KLF15
location: join(3394341..3395413,3428147..3428162)
location: region:3394341-3428162:1
so has part: feature:3394341-3395413:1:exon
so has part: feature:3428147-3428162:1:exon

XP_032991605.1
type: Protein
SIO_000068: ncbiprotein

position:3428162:1
position: 3428162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3394341-3395413:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3428147-3428162:1:exon

KLF15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: KLF15
product: KLF transcription factor 15, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_033135710.1
SIO_010081: KLF15
subclass of: SO_0000673
so part of: KLF15
location: join(3394341..3395413,3402814..3404032)
location: region:3394341-3404032:1
so has part: feature:3394341-3395413:1:exon
so has part: feature:3402814-3404032:1:exon

position:3404032:1
position: 3404032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3394341-3395413:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3402814-3404032:1:exon

position:3402814:1
position: 3402814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

KLF15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: KLF15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Krueppel-like factor 15 isoform X7
translation: MVDHLLPVDENFSSPKCPVGYLGNRLVGRAYHMLPSPLSEDDSDASSLCSCASPDSQALCSCYSGGLGTEGQDNILDFLLSQATLGSSGSGSIGASSGPVTWEAWRREPVPVKGEHFCFPEFAVSDLDDVPRPFQPTLEEIEEFLEENMELGVKEAPENNSKELEACGQLSAAPHRSHVHPGSGGRERCAPPPAGASAGDTQGPSGGPAPDGPVPLLLQIQPVQVKQESGTEPASPGQAPESVKVAQLLVNIQGQTFALLPQVVPSSNLNLPSKFVRIAPVPIAAKPIGSGPLGPGPAGLLMGQKFPKNPAAELIKMHKCTFPGCSKMYTKSSHLKAHLRRHTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPYQCPVCEKKFARSDHLSKHIKVHRFPRSSRSVRAAN
SIO_010081: KLF15
subclass of: SO_0000673
so part of: KLF15
location: join(3394341..3395413,3402814..3402982)
location: region:3394341-3402982:1
so has part: feature:3394341-3395413:1:exon
so has part: feature:3402814-3402982:1:exon

XP_032991601.1
type: Protein
SIO_000068: ncbiprotein

position:3402982:1
position: 3402982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3394341-3395413:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3402814-3402982:1:exon

LOC117038668
type: Gene
subclass of: SO_0000704
RO_0002162: 59479
gene: LOC117038668
note: non-histone chromosomal protein HMG-14-like; Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(3472176..3472539)
location: region:3472176-3472539:-1
so has part: feature:3472176-3472539:-1:exon

117038668
type: Gene
SIO_000068: ncbigene

position:3472176:-1
position: 3472176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3472539:-1
position: 3472539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3472176-3472539:-1:exon

LOC117038668
type: Exon
subclass of: SO_0000147
RO_0002162: 59479
gene: LOC117038668
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
pseudo: true
SIO_010081: LOC117038668
subclass of: SO_0000673
so part of: LOC117038668
location: complement(3472176..3472539)
location: region:3472176-3472539:-1
so has part: feature:3472176-3472539:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3472176-3472539:-1:exon

LOC117011853
type: Gene
subclass of: SO_0000704
RO_0002162: 59479
gene: LOC117011853
note: heterogeneous nuclear ribonucleoprotein H2-like; Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 3491202..3492990
location: region:3491202-3492990:1
so has part: feature:3491202-3492990:1:exon

117011853
type: Gene
SIO_000068: ncbigene

position:3491202:1
position: 3491202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3492990:1
position: 3492990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3491202-3492990:1:exon

LOC117011853
type: Exon
subclass of: SO_0000147
RO_0002162: 59479
gene: LOC117011853
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
pseudo: true
SIO_010081: LOC117011853
subclass of: SO_0000673
so part of: LOC117011853
location: 3491202..3491513
location: region:3491202-3491513:1
so has part: feature:3491202-3491513:1:exon

position:3491513:1
position: 3491513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3491202-3491513:1:exon

LOC117011853
type: Exon
subclass of: SO_0000147
RO_0002162: 59479
gene: LOC117011853
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
pseudo: true
SIO_010081: LOC117011853
subclass of: SO_0000673
so part of: LOC117011853
location: 3491959..3492744
location: region:3491959-3492744:1
so has part: feature:3491959-3492744:1:exon

position:3491959:1
position: 3491959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3492744:1
position: 3492744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3491959-3492744:1:exon

LOC117011853
type: Exon
subclass of: SO_0000147
RO_0002162: 59479
gene: LOC117011853
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
pseudo: true
SIO_010081: LOC117011853
subclass of: SO_0000673
so part of: LOC117011853
location: 3492797..3492990
location: region:3492797-3492990:1
so has part: feature:3492797-3492990:1:exon

position:3492797:1
position: 3492797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3492797-3492990:1:exon

LOC117038669
type: Gene
subclass of: SO_0000704
RO_0002162: 59479
gene: LOC117038669
note: vomeronasal type-1 receptor 3-like; Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(3550011..3550933)
location: region:3550011-3550933:-1
so has part: feature:3550011-3550933:-1:exon

117038669
type: Gene
SIO_000068: ncbigene

position:3550011:-1
position: 3550011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3550933:-1
position: 3550933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3550011-3550933:-1:exon

LOC117038669
type: Exon
subclass of: SO_0000147
RO_0002162: 59479
gene: LOC117038669
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC117038669
subclass of: SO_0000673
so part of: LOC117038669
location: complement(3550011..3550933)
location: region:3550011-3550933:-1
so has part: feature:3550011-3550933:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3550011-3550933:-1:exon

ALDH1L1
type: Gene
subclass of: SO_0000704
RO_0002162: 59479
gene: ALDH1L1
note: aldehyde dehydrogenase 1 family member L1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3617458..3732370
location: region:3617458-3732370:1
so has part: feature:3617458-3732370:1:exon
subclass of: SO_0000010

117038749
type: Gene
SIO_000068: ncbigene

position:3617458:1
position: 3617458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3732370:1
position: 3732370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3617458-3732370:1:exon

ALDH1L1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: ALDH1L1
product: aldehyde dehydrogenase 1 family member L1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_033135659.1
SIO_010081: ALDH1L1
subclass of: SO_0000673
so part of: ALDH1L1
location: join(3617458..3617619,3668618..3668731,3669872..3670023,3671954..3672188,3673077..3673242,3675664..3675765,3676593..3676682,3677548..3677685,3679768..3679893,3683395..3683486,3698343..3698490,3699800..3699919,3701135..3701262,3705106..3705256,3706297..3706367,3710407..3710512,3712208..3712295,3718411..3718504,3720892..3720991,3723710..3723808,3726304..3726469,3728661..3728766,3730021..3730220,3732065..3732370)
location: region:3617458-3732370:1
so has part: feature:3617458-3617619:1:exon
so has part: feature:3668618-3668731:1:exon
so has part: feature:3669872-3670023:1:exon
so has part: feature:3671954-3672188:1:exon
so has part: feature:3673077-3673242:1:exon
so has part: feature:3675664-3675765:1:exon
so has part: feature:3676593-3676682:1:exon
so has part: feature:3677548-3677685:1:exon
so has part: feature:3679768-3679893:1:exon
so has part: feature:3683395-3683486:1:exon
so has part: feature:3698343-3698490:1:exon
so has part: feature:3699800-3699919:1:exon
so has part: feature:3701135-3701262:1:exon
so has part: feature:3705106-3705256:1:exon
so has part: feature:3706297-3706367:1:exon
so has part: feature:3710407-3710512:1:exon
so has part: feature:3712208-3712295:1:exon
so has part: feature:3718411-3718504:1:exon
so has part: feature:3720892-3720991:1:exon
so has part: feature:3723710-3723808:1:exon
so has part: feature:3726304-3726469:1:exon
so has part: feature:3728661-3728766:1:exon
so has part: feature:3730021-3730220:1:exon
so has part: feature:3732065-3732370:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3617458-3617619:1:exon

position:3617619:1
position: 3617619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3668618-3668731:1:exon

position:3668618:1
position: 3668618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3668731:1
position: 3668731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3669872-3670023:1:exon

position:3669872:1
position: 3669872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3670023:1
position: 3670023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3671954-3672188:1:exon

position:3671954:1
position: 3671954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3672188:1
position: 3672188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3673077-3673242:1:exon

position:3673077:1
position: 3673077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3673242:1
position: 3673242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3675664-3675765:1:exon

position:3675664:1
position: 3675664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3675765:1
position: 3675765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3676593-3676682:1:exon

position:3676593:1
position: 3676593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3676682:1
position: 3676682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3677548-3677685:1:exon

position:3677548:1
position: 3677548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3677685:1
position: 3677685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3679768-3679893:1:exon

position:3679768:1
position: 3679768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3679893:1
position: 3679893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3683395-3683486:1:exon

position:3683395:1
position: 3683395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3683486:1
position: 3683486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3698343-3698490:1:exon

position:3698343:1
position: 3698343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3698490:1
position: 3698490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3699800-3699919:1:exon

position:3699800:1
position: 3699800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3699919:1
position: 3699919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3701135-3701262:1:exon

position:3701135:1
position: 3701135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3701262:1
position: 3701262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3705106-3705256:1:exon

position:3705106:1
position: 3705106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3705256:1
position: 3705256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3706297-3706367:1:exon

position:3706297:1
position: 3706297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3706367:1
position: 3706367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3710407-3710512:1:exon

position:3710407:1
position: 3710407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3710512:1
position: 3710512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3712208-3712295:1:exon

position:3712208:1
position: 3712208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3712295:1
position: 3712295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3718411-3718504:1:exon

position:3718411:1
position: 3718411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3718504:1
position: 3718504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:3720892-3720991:1:exon

position:3720892:1
position: 3720892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3720991:1
position: 3720991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:3723710-3723808:1:exon

position:3723710:1
position: 3723710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3723808:1
position: 3723808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:3726304-3726469:1:exon

position:3726304:1
position: 3726304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3726469:1
position: 3726469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:3728661-3728766:1:exon

position:3728661:1
position: 3728661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3728766:1
position: 3728766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:3730021-3730220:1:exon

position:3730021:1
position: 3730021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3730220:1
position: 3730220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:3732065-3732370:1:exon

position:3732065:1
position: 3732065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ALDH1L1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: ALDH1L1
product: aldehyde dehydrogenase 1 family member L1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_033135658.1
SIO_010081: ALDH1L1
subclass of: SO_0000673
so part of: ALDH1L1
location: join(3617458..3617619,3669872..3670023,3671954..3672188,3673077..3673242,3675664..3675765,3676593..3676682,3677548..3677685,3679768..3679893,3683395..3683486,3698343..3698490,3699800..3699919,3701135..3701262,3705106..3705256,3706297..3706367,3710407..3710512,3712208..3712295,3718411..3718504,3720892..3720991,3723710..3723808,3726304..3726469,3728661..3728766,3730021..3730220,3732065..3732370)
location: region:3617458-3732370:1
so has part: feature:3617458-3617619:1:exon
so has part: feature:3669872-3670023:1:exon
so has part: feature:3671954-3672188:1:exon
so has part: feature:3673077-3673242:1:exon
so has part: feature:3675664-3675765:1:exon
so has part: feature:3676593-3676682:1:exon
so has part: feature:3677548-3677685:1:exon
so has part: feature:3679768-3679893:1:exon
so has part: feature:3683395-3683486:1:exon
so has part: feature:3698343-3698490:1:exon
so has part: feature:3699800-3699919:1:exon
so has part: feature:3701135-3701262:1:exon
so has part: feature:3705106-3705256:1:exon
so has part: feature:3706297-3706367:1:exon
so has part: feature:3710407-3710512:1:exon
so has part: feature:3712208-3712295:1:exon
so has part: feature:3718411-3718504:1:exon
so has part: feature:3720892-3720991:1:exon
so has part: feature:3723710-3723808:1:exon
so has part: feature:3726304-3726469:1:exon
so has part: feature:3728661-3728766:1:exon
so has part: feature:3730021-3730220:1:exon
so has part: feature:3732065-3732370:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3617458-3617619:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3669872-3670023:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3671954-3672188:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3673077-3673242:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3675664-3675765:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3676593-3676682:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3677548-3677685:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3679768-3679893:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3683395-3683486:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3698343-3698490:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3699800-3699919:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3701135-3701262:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3705106-3705256:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3706297-3706367:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3710407-3710512:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3712208-3712295:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3718411-3718504:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3720892-3720991:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3723710-3723808:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3726304-3726469:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3728661-3728766:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3730021-3730220:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3732065-3732370:1:exon

LOC117038671
type: Gene
subclass of: SO_0000704
RO_0002162: 59479
gene: LOC117038671
note: Y-box-binding protein 3-like; Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(3646027..3669193)
location: region:3646027-3669193:-1
so has part: feature:3646027-3669193:-1:exon

117038671
type: Gene
SIO_000068: ncbigene

position:3646027:-1
position: 3646027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3669193:-1
position: 3669193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3646027-3669193:-1:exon

LOC117038671
type: Exon
subclass of: SO_0000147
RO_0002162: 59479
gene: LOC117038671
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 17% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117038671
subclass of: SO_0000673
so part of: LOC117038671
location: complement(3646027..3646677)
location: region:3646027-3646677:-1
so has part: feature:3646027-3646677:-1:exon

position:3646677:-1
position: 3646677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3646027-3646677:-1:exon

LOC117038671
type: Exon
subclass of: SO_0000147
RO_0002162: 59479
gene: LOC117038671
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 17% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117038671
subclass of: SO_0000673
so part of: LOC117038671
location: complement(3655935..3656178)
location: region:3655935-3656178:-1
so has part: feature:3655935-3656178:-1:exon

position:3655935:-1
position: 3655935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3656178:-1
position: 3656178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3655935-3656178:-1:exon

LOC117038671
type: Exon
subclass of: SO_0000147
RO_0002162: 59479
gene: LOC117038671
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 17% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117038671
subclass of: SO_0000673
so part of: LOC117038671
location: complement(3669064..3669193)
location: region:3669064-3669193:-1
so has part: feature:3669064-3669193:-1:exon

position:3669064:-1
position: 3669064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3669064-3669193:-1:exon

ALDH1L1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: ALDH1L1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytosolic 10-formyltetrahydrofolate dehydrogenase
translation: MKIAVIGQSLFGQEVYRCLREEGHEVVGVFTIPDKNGKVDPLGLEAEKDGVPVFKFPRWRVKGQALPDVVAKYQALGAELNVLPFCSQFIPMEVINAPCHGSIIYHPSLLPRHRGASAINWTLIHGDKKGGFTIFWADDGLDTGDLLLQKECEILPDDTVNTLYNRFLFPEGIKGMVQAVRLIAEGKAPRLPQPEEGATYEGIQKKETAKINWDQPAEVIHNWIRGNDKMPGAWTEACGQKLTFFNSTLNTAGLVPEGEALPIPGAHRPGVVTERGLVLFGNDDRMLLVKSIQLEDGKMIPASHFFRGEDNCALDLTEAELDIMEAVRSAWKRILPSIPEVEDSTDFFKSGAASVDIVRLVEEVKELCDGLELENEDVYMATTFKDFIQLLVRKLRGNNKESECIIDYVEKAVNKLTLQMPHQLFIGGTFVDAEGTKTYETINPTDGSVICQVSLAQVSDVDKAVAAAKDAFETGLWGKISARDRGRLLYRLADLMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGSTIPINQARPNRNLTLTRKEPIGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVINVLPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLIIFADCDLSKAVQMGMSSVFFNKGENCIAAGRVFVEDSIHDLFVQKVVEEVTKMKIGNPLDRDTNHGPQNHQAHLQKLIEYCQRGVKEGATLVCGGNQVPRSGFFFQPTVFTDVEDHMFIAKEESFGPIMIISRFANGDVDTVLSRANATEFGLASGVFTRDISKALYVSDKLEAGTVFINTYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRVKTITAEY
SIO_010081: ALDH1L1
subclass of: SO_0000673
so part of: ALDH1L1
location: join(3669897..3670023,3671954..3672188,3673077..3673242,3675664..3675765,3676593..3676682,3677548..3677685,3679768..3679893,3683395..3683486,3698343..3698490,3699800..3699919,3701135..3701262,3705106..3705256,3706297..3706367,3710407..3710512,3712208..3712295,3718411..3718504,3720892..3720991,3723710..3723808,3726304..3726469,3728661..3728766,3730021..3730220,3732065..3732120)
location: region:3669897-3732120:1
so has part: feature:3669897-3670023:1:exon
so has part: feature:3671954-3672188:1:exon
so has part: feature:3673077-3673242:1:exon
so has part: feature:3675664-3675765:1:exon
so has part: feature:3676593-3676682:1:exon
so has part: feature:3677548-3677685:1:exon
so has part: feature:3679768-3679893:1:exon
so has part: feature:3683395-3683486:1:exon
so has part: feature:3698343-3698490:1:exon
so has part: feature:3699800-3699919:1:exon
so has part: feature:3701135-3701262:1:exon
so has part: feature:3705106-3705256:1:exon
so has part: feature:3706297-3706367:1:exon
so has part: feature:3710407-3710512:1:exon
so has part: feature:3712208-3712295:1:exon
so has part: feature:3718411-3718504:1:exon
so has part: feature:3720892-3720991:1:exon
so has part: feature:3723710-3723808:1:exon
so has part: feature:3726304-3726469:1:exon
so has part: feature:3728661-3728766:1:exon
so has part: feature:3730021-3730220:1:exon
so has part: feature:3732065-3732120:1:exon

XP_032991549.1
type: Protein
SIO_000068: ncbiprotein

position:3669897:1
position: 3669897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3732120:1
position: 3732120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3669897-3670023:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3671954-3672188:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3673077-3673242:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3675664-3675765:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3676593-3676682:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3677548-3677685:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3679768-3679893:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3683395-3683486:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3698343-3698490:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3699800-3699919:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3701135-3701262:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3705106-3705256:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3706297-3706367:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3710407-3710512:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3712208-3712295:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3718411-3718504:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3720892-3720991:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3723710-3723808:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3726304-3726469:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3728661-3728766:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3730021-3730220:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3732065-3732120:1:exon

ALDH1L1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: ALDH1L1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytosolic 10-formyltetrahydrofolate dehydrogenase
translation: MKIAVIGQSLFGQEVYRCLREEGHEVVGVFTIPDKNGKVDPLGLEAEKDGVPVFKFPRWRVKGQALPDVVAKYQALGAELNVLPFCSQFIPMEVINAPCHGSIIYHPSLLPRHRGASAINWTLIHGDKKGGFTIFWADDGLDTGDLLLQKECEILPDDTVNTLYNRFLFPEGIKGMVQAVRLIAEGKAPRLPQPEEGATYEGIQKKETAKINWDQPAEVIHNWIRGNDKMPGAWTEACGQKLTFFNSTLNTAGLVPEGEALPIPGAHRPGVVTERGLVLFGNDDRMLLVKSIQLEDGKMIPASHFFRGEDNCALDLTEAELDIMEAVRSAWKRILPSIPEVEDSTDFFKSGAASVDIVRLVEEVKELCDGLELENEDVYMATTFKDFIQLLVRKLRGNNKESECIIDYVEKAVNKLTLQMPHQLFIGGTFVDAEGTKTYETINPTDGSVICQVSLAQVSDVDKAVAAAKDAFETGLWGKISARDRGRLLYRLADLMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGSTIPINQARPNRNLTLTRKEPIGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVINVLPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLIIFADCDLSKAVQMGMSSVFFNKGENCIAAGRVFVEDSIHDLFVQKVVEEVTKMKIGNPLDRDTNHGPQNHQAHLQKLIEYCQRGVKEGATLVCGGNQVPRSGFFFQPTVFTDVEDHMFIAKEESFGPIMIISRFANGDVDTVLSRANATEFGLASGVFTRDISKALYVSDKLEAGTVFINTYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRVKTITAEY
SIO_010081: ALDH1L1
subclass of: SO_0000673
so part of: ALDH1L1
location: join(3669897..3670023,3671954..3672188,3673077..3673242,3675664..3675765,3676593..3676682,3677548..3677685,3679768..3679893,3683395..3683486,3698343..3698490,3699800..3699919,3701135..3701262,3705106..3705256,3706297..3706367,3710407..3710512,3712208..3712295,3718411..3718504,3720892..3720991,3723710..3723808,3726304..3726469,3728661..3728766,3730021..3730220,3732065..3732120)
location: region:3669897-3732120:1
so has part: feature:3669897-3670023:1:exon
so has part: feature:3671954-3672188:1:exon
so has part: feature:3673077-3673242:1:exon
so has part: feature:3675664-3675765:1:exon
so has part: feature:3676593-3676682:1:exon
so has part: feature:3677548-3677685:1:exon
so has part: feature:3679768-3679893:1:exon
so has part: feature:3683395-3683486:1:exon
so has part: feature:3698343-3698490:1:exon
so has part: feature:3699800-3699919:1:exon
so has part: feature:3701135-3701262:1:exon
so has part: feature:3705106-3705256:1:exon
so has part: feature:3706297-3706367:1:exon
so has part: feature:3710407-3710512:1:exon
so has part: feature:3712208-3712295:1:exon
so has part: feature:3718411-3718504:1:exon
so has part: feature:3720892-3720991:1:exon
so has part: feature:3723710-3723808:1:exon
so has part: feature:3726304-3726469:1:exon
so has part: feature:3728661-3728766:1:exon
so has part: feature:3730021-3730220:1:exon
so has part: feature:3732065-3732120:1:exon

XP_032991550.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3669897-3670023:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3671954-3672188:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3673077-3673242:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3675664-3675765:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3676593-3676682:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3677548-3677685:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3679768-3679893:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3683395-3683486:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3698343-3698490:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3699800-3699919:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3701135-3701262:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3705106-3705256:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3706297-3706367:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3710407-3710512:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3712208-3712295:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3718411-3718504:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3720892-3720991:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3723710-3723808:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3726304-3726469:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3728661-3728766:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3730021-3730220:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3732065-3732120:1:exon

LOC117038750
type: Gene
subclass of: SO_0000704
RO_0002162: 59479
gene: LOC117038750
note: uncharacterized LOC117038750; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3701269..3710393)
location: region:3701269-3710393:-1
so has part: feature:3701269-3710393:-1:exon
subclass of: SO_0000011

117038750
type: Gene
SIO_000068: ncbigene

position:3701269:-1
position: 3701269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3710393:-1
position: 3710393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3701269-3710393:-1:exon

LOC117038750
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59479
nc RNA class: lncRNA
gene: LOC117038750
product: uncharacterized LOC117038750
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_004425715.1
SIO_010081: LOC117038750
subclass of: SO_0000673
so part of: LOC117038750
location: complement(join(3701269..3702089,3704160..3704366,3707807..3710393))
location: region:3701269-3710393:-1
so has part: feature:3707807-3710393:-1:exon
so has part: feature:3704160-3704366:-1:exon
so has part: feature:3701269-3702089:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3707807-3710393:-1:exon

position:3707807:-1
position: 3707807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3704160-3704366:-1:exon

position:3704160:-1
position: 3704160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3704366:-1
position: 3704366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3701269-3702089:-1:exon

position:3702089:-1
position: 3702089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC41A3
type: Gene
subclass of: SO_0000704
RO_0002162: 59479
gene: SLC41A3
note: solute carrier family 41 member 3; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3783835..3852104
location: region:3783835-3852104:1
so has part: feature:3783835-3852104:1:exon
subclass of: SO_0000010

117011747
type: Gene
SIO_000068: ncbigene

position:3783835:1
position: 3783835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3852104:1
position: 3852104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3783835-3852104:1:exon

SLC41A3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: SLC41A3
product: solute carrier family 41 member 3, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 3 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033087398.1
SIO_010081: SLC41A3
subclass of: SO_0000673
so part of: SLC41A3
location: join(3783835..3783987,3795354..3795640,3809847..3810002,3816820..3816927,3831170..3831241,3835688..3835832,3838857..3839003,3841741..3841885,3843067..3843146,3845288..3845422,3849953..3850101,3851332..3852104)
location: region:3783835-3852104:1
so has part: feature:3783835-3783987:1:exon
so has part: feature:3795354-3795640:1:exon
so has part: feature:3809847-3810002:1:exon
so has part: feature:3816820-3816927:1:exon
so has part: feature:3831170-3831241:1:exon
so has part: feature:3835688-3835832:1:exon
so has part: feature:3838857-3839003:1:exon
so has part: feature:3841741-3841885:1:exon
so has part: feature:3843067-3843146:1:exon
so has part: feature:3845288-3845422:1:exon
so has part: feature:3849953-3850101:1:exon
so has part: feature:3851332-3852104:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3783835-3783987:1:exon

position:3783987:1
position: 3783987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3795354-3795640:1:exon

position:3795354:1
position: 3795354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3795640:1
position: 3795640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3809847-3810002:1:exon

position:3809847:1
position: 3809847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3810002:1
position: 3810002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3816820-3816927:1:exon

position:3816820:1
position: 3816820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3816927:1
position: 3816927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3831170-3831241:1:exon

position:3831170:1
position: 3831170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3831241:1
position: 3831241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3835688-3835832:1:exon

position:3835688:1
position: 3835688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3835832:1
position: 3835832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3838857-3839003:1:exon

position:3838857:1
position: 3838857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3839003:1
position: 3839003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3841741-3841885:1:exon

position:3841741:1
position: 3841741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3841885:1
position: 3841885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3843067-3843146:1:exon

position:3843067:1
position: 3843067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3843146:1
position: 3843146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3845288-3845422:1:exon

position:3845288:1
position: 3845288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3845422:1
position: 3845422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3849953-3850101:1:exon

position:3849953:1
position: 3849953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3850101:1
position: 3850101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3851332-3852104:1:exon

position:3851332:1
position: 3851332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SLC41A3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: SLC41A3
product: solute carrier family 41 member 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_033087393.1
SIO_010081: SLC41A3
subclass of: SO_0000673
so part of: SLC41A3
location: join(3783839..3783987,3795354..3795640,3816820..3816927,3831170..3831241,3835688..3835832,3838857..3839003,3841741..3841885,3843067..3843146,3845288..3845422,3849953..3850101,3851332..3852104)
location: region:3783839-3852104:1
so has part: feature:3783839-3783987:1:exon
so has part: feature:3795354-3795640:1:exon
so has part: feature:3816820-3816927:1:exon
so has part: feature:3831170-3831241:1:exon
so has part: feature:3835688-3835832:1:exon
so has part: feature:3838857-3839003:1:exon
so has part: feature:3841741-3841885:1:exon
so has part: feature:3843067-3843146:1:exon
so has part: feature:3845288-3845422:1:exon
so has part: feature:3849953-3850101:1:exon
so has part: feature:3851332-3852104:1:exon

position:3783839:1
position: 3783839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3783839-3783987:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3795354-3795640:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3816820-3816927:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3831170-3831241:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3835688-3835832:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3838857-3839003:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3841741-3841885:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3843067-3843146:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3845288-3845422:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3849953-3850101:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3851332-3852104:1:exon

SLC41A3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: SLC41A3
product: solute carrier family 41 member 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_033087396.1
SIO_010081: SLC41A3
subclass of: SO_0000673
so part of: SLC41A3
location: join(3783840..3783987,3795354..3795640,3831170..3831241,3835688..3835832,3838857..3839003,3841741..3841885,3843067..3843146,3845288..3845422,3849953..3850101,3851332..3852104)
location: region:3783840-3852104:1
so has part: feature:3783840-3783987:1:exon
so has part: feature:3795354-3795640:1:exon
so has part: feature:3831170-3831241:1:exon
so has part: feature:3835688-3835832:1:exon
so has part: feature:3838857-3839003:1:exon
so has part: feature:3841741-3841885:1:exon
so has part: feature:3843067-3843146:1:exon
so has part: feature:3845288-3845422:1:exon
so has part: feature:3849953-3850101:1:exon
so has part: feature:3851332-3852104:1:exon

position:3783840:1
position: 3783840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3783840-3783987:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3795354-3795640:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3831170-3831241:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3835688-3835832:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3838857-3839003:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3841741-3841885:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3843067-3843146:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3845288-3845422:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3849953-3850101:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3851332-3852104:1:exon

SLC41A3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: SLC41A3
product: solute carrier family 41 member 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_033087394.1
SIO_010081: SLC41A3
subclass of: SO_0000673
so part of: SLC41A3
location: join(3784292..3784393,3795354..3795640,3816820..3816927,3831170..3831241,3835688..3835832,3838857..3839003,3841741..3841885,3843067..3843146,3845288..3845422,3849953..3850101,3851332..3852104)
location: region:3784292-3852104:1
so has part: feature:3784292-3784393:1:exon
so has part: feature:3795354-3795640:1:exon
so has part: feature:3816820-3816927:1:exon
so has part: feature:3831170-3831241:1:exon
so has part: feature:3835688-3835832:1:exon
so has part: feature:3838857-3839003:1:exon
so has part: feature:3841741-3841885:1:exon
so has part: feature:3843067-3843146:1:exon
so has part: feature:3845288-3845422:1:exon
so has part: feature:3849953-3850101:1:exon
so has part: feature:3851332-3852104:1:exon

position:3784292:1
position: 3784292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3784292-3784393:1:exon

position:3784393:1
position: 3784393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3795354-3795640:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3816820-3816927:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3831170-3831241:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3835688-3835832:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3838857-3839003:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3841741-3841885:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3843067-3843146:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3845288-3845422:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3849953-3850101:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3851332-3852104:1:exon

SLC41A3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: SLC41A3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 41 member 3 isoform X5
translation: MDGTETRQRRAEELGLPYTLSTGRLPRASEDGPLSVPESQRVSPKLLGTELSRETALSIGLQVIVPFMFAGLGLSGAGILLNYFQGKKLRGFSCELTRSPYGVFPETAFTVTCQITVPLLLSGLGMMTAGLVMNTVQHWPVFMEVKDLLTLVPPLVGLKGNLEMTLASRLSTAANTGQMDDPREQHRVITSNLALIQVQATVVGFLAAMAALLLGALSRGELDFEKVELLCASSVITAFLAAFALGMLMVCIVIGARKLGVNPDNIATPIAASLGDLITLSILAFFSSFFYKHKDSRYVAPLVCIGLMALTPVWVLTAKRSPPIMEILKFGWFPIILAMMISSFGGLILNKTISKEQYKGMAIFTPIICGVGGNLVAIQTSRISTYLHMWSTPGVLPLWMKKFWPNPCSTFCTSEINSMSARVLLFLVIPGHLIFLYVIYLVEGHSVPNSKTFVVFYLLAGLIQVTILLYLAEVMARLTWHQSLDPDNHCIPYLTGLGDLLGTGLLALCFLISWLLRSEAELDGILEPASAPP
SIO_010081: SLC41A3
subclass of: SO_0000673
so part of: SLC41A3
location: join(3795386..3795640,3809847..3810002,3816820..3816927,3831170..3831241,3835688..3835832,3838857..3839003,3841741..3841885,3843067..3843146,3845288..3845422,3849953..3850101,3851332..3851541)
location: region:3795386-3851541:1
so has part: feature:3795386-3795640:1:exon
so has part: feature:3809847-3810002:1:exon
so has part: feature:3816820-3816927:1:exon
so has part: feature:3831170-3831241:1:exon
so has part: feature:3835688-3835832:1:exon
so has part: feature:3838857-3839003:1:exon
so has part: feature:3841741-3841885:1:exon
so has part: feature:3843067-3843146:1:exon
so has part: feature:3845288-3845422:1:exon
so has part: feature:3849953-3850101:1:exon
so has part: feature:3851332-3851541:1:exon

XP_032943289.1
type: Protein
SIO_000068: ncbiprotein

position:3795386:1
position: 3795386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3851541:1
position: 3851541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3795386-3795640:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3809847-3810002:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3816820-3816927:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3831170-3831241:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3835688-3835832:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3838857-3839003:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3841741-3841885:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3843067-3843146:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3845288-3845422:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3849953-3850101:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3851332-3851541:1:exon

SLC41A3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: SLC41A3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 41 member 3 isoform X1
translation: MDGTETRQRRAEELGLPYTLSTGRLPRASEDGPLSVPESQRVSPKLLGTELSRETALSIGLQVIVPFMFAGLGLSGAGILLNYFQHWPVFMEVKDLLTLVPPLVGLKGNLEMTLASRLSTAANTGQMDDPREQHRVITSNLALIQVQATVVGFLAAMAALLLGALSRGELDFEKVELLCASSVITAFLAAFALGMLMVCIVIGARKLGVNPDNIATPIAASLGDLITLSILAFFSSFFYKHKDSRYVAPLVCIGLMALTPVWVLTAKRSPPIMEILKFGWFPIILAMMISSFGGLILNKTISKEQYKGMAIFTPIICGVGGNLVAIQTSRISTYLHMWSTPGVLPLWMKKFWPNPCSTFCTSEINSMSARVLLFLVIPGHLIFLYVIYLVEGHSVPNSKTFVVFYLLAGLIQVTILLYLAEVMARLTWHQSLDPDNHCIPYLTGLGDLLGTGLLALCFLISWLLRSEAELDGILEPASAPP
SIO_010081: SLC41A3
subclass of: SO_0000673
so part of: SLC41A3
location: join(3795386..3795640,3816820..3816927,3831170..3831241,3835688..3835832,3838857..3839003,3841741..3841885,3843067..3843146,3845288..3845422,3849953..3850101,3851332..3851541)
location: region:3795386-3851541:1
so has part: feature:3795386-3795640:1:exon
so has part: feature:3816820-3816927:1:exon
so has part: feature:3831170-3831241:1:exon
so has part: feature:3835688-3835832:1:exon
so has part: feature:3838857-3839003:1:exon
so has part: feature:3841741-3841885:1:exon
so has part: feature:3843067-3843146:1:exon
so has part: feature:3845288-3845422:1:exon
so has part: feature:3849953-3850101:1:exon
so has part: feature:3851332-3851541:1:exon

XP_032943284.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3795386-3795640:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3816820-3816927:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3831170-3831241:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3835688-3835832:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3838857-3839003:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3841741-3841885:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3843067-3843146:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3845288-3845422:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3849953-3850101:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3851332-3851541:1:exon

SLC41A3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: SLC41A3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 41 member 3 isoform X1
translation: MDGTETRQRRAEELGLPYTLSTGRLPRASEDGPLSVPESQRVSPKLLGTELSRETALSIGLQVIVPFMFAGLGLSGAGILLNYFQHWPVFMEVKDLLTLVPPLVGLKGNLEMTLASRLSTAANTGQMDDPREQHRVITSNLALIQVQATVVGFLAAMAALLLGALSRGELDFEKVELLCASSVITAFLAAFALGMLMVCIVIGARKLGVNPDNIATPIAASLGDLITLSILAFFSSFFYKHKDSRYVAPLVCIGLMALTPVWVLTAKRSPPIMEILKFGWFPIILAMMISSFGGLILNKTISKEQYKGMAIFTPIICGVGGNLVAIQTSRISTYLHMWSTPGVLPLWMKKFWPNPCSTFCTSEINSMSARVLLFLVIPGHLIFLYVIYLVEGHSVPNSKTFVVFYLLAGLIQVTILLYLAEVMARLTWHQSLDPDNHCIPYLTGLGDLLGTGLLALCFLISWLLRSEAELDGILEPASAPP
SIO_010081: SLC41A3
subclass of: SO_0000673
so part of: SLC41A3
location: join(3795386..3795640,3816820..3816927,3831170..3831241,3835688..3835832,3838857..3839003,3841741..3841885,3843067..3843146,3845288..3845422,3849953..3850101,3851332..3851541)
location: region:3795386-3851541:1
so has part: feature:3795386-3795640:1:exon
so has part: feature:3816820-3816927:1:exon
so has part: feature:3831170-3831241:1:exon
so has part: feature:3835688-3835832:1:exon
so has part: feature:3838857-3839003:1:exon
so has part: feature:3841741-3841885:1:exon
so has part: feature:3843067-3843146:1:exon
so has part: feature:3845288-3845422:1:exon
so has part: feature:3849953-3850101:1:exon
so has part: feature:3851332-3851541:1:exon

XP_032943285.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3795386-3795640:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3816820-3816927:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3831170-3831241:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3835688-3835832:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3838857-3839003:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3841741-3841885:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3843067-3843146:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3845288-3845422:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3849953-3850101:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3851332-3851541:1:exon

SLC41A3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: SLC41A3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 41 member 3 isoform X3
translation: MDGTETRQRRAEELGLPYTLSTGRLPRASEDGPLSVPESQRVSPKLLGTELSRETALSIGLQVIVPFMFAGLGLSGAGILLNYFQANTGQMDDPREQHRVITSNLALIQVQATVVGFLAAMAALLLGALSRGELDFEKVELLCASSVITAFLAAFALGMLMVCIVIGARKLGVNPDNIATPIAASLGDLITLSILAFFSSFFYKHKDSRYVAPLVCIGLMALTPVWVLTAKRSPPIMEILKFGWFPIILAMMISSFGGLILNKTISKEQYKGMAIFTPIICGVGGNLVAIQTSRISTYLHMWSTPGVLPLWMKKFWPNPCSTFCTSEINSMSARVLLFLVIPGHLIFLYVIYLVEGHSVPNSKTFVVFYLLAGLIQVTILLYLAEVMARLTWHQSLDPDNHCIPYLTGLGDLLGTGLLALCFLISWLLRSEAELDGILEPASAPP
SIO_010081: SLC41A3
subclass of: SO_0000673
so part of: SLC41A3
location: join(3795386..3795640,3831170..3831241,3835688..3835832,3838857..3839003,3841741..3841885,3843067..3843146,3845288..3845422,3849953..3850101,3851332..3851541)
location: region:3795386-3851541:1
so has part: feature:3795386-3795640:1:exon
so has part: feature:3831170-3831241:1:exon
so has part: feature:3835688-3835832:1:exon
so has part: feature:3838857-3839003:1:exon
so has part: feature:3841741-3841885:1:exon
so has part: feature:3843067-3843146:1:exon
so has part: feature:3845288-3845422:1:exon
so has part: feature:3849953-3850101:1:exon
so has part: feature:3851332-3851541:1:exon

XP_032943287.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3795386-3795640:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3831170-3831241:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3835688-3835832:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3838857-3839003:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3841741-3841885:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3843067-3843146:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3845288-3845422:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3849953-3850101:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3851332-3851541:1:exon

SLC41A3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: SLC41A3
product: solute carrier family 41 member 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_033087395.1
SIO_010081: SLC41A3
subclass of: SO_0000673
so part of: SLC41A3
location: join(3809573..3810002,3816820..3816927,3831170..3831241,3835688..3835832,3838857..3839003,3841741..3841885,3843067..3843146,3845288..3845422,3849953..3850101,3851332..3852104)
location: region:3809573-3852104:1
so has part: feature:3809573-3810002:1:exon
so has part: feature:3816820-3816927:1:exon
so has part: feature:3831170-3831241:1:exon
so has part: feature:3835688-3835832:1:exon
so has part: feature:3838857-3839003:1:exon
so has part: feature:3841741-3841885:1:exon
so has part: feature:3843067-3843146:1:exon
so has part: feature:3845288-3845422:1:exon
so has part: feature:3849953-3850101:1:exon
so has part: feature:3851332-3852104:1:exon

position:3809573:1
position: 3809573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3809573-3810002:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3816820-3816927:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3831170-3831241:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3835688-3835832:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3838857-3839003:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3841741-3841885:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3843067-3843146:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3845288-3845422:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3849953-3850101:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3851332-3852104:1:exon

SLC41A3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: SLC41A3
product: solute carrier family 41 member 3, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_033087397.1
SIO_010081: SLC41A3
subclass of: SO_0000673
so part of: SLC41A3
location: join(3809573..3810002,3831170..3831241,3835688..3835832,3838857..3839003,3841741..3841885,3843067..3843146,3845288..3845422,3849953..3850101,3851332..3852104)
location: region:3809573-3852104:1
so has part: feature:3809573-3810002:1:exon
so has part: feature:3831170-3831241:1:exon
so has part: feature:3835688-3835832:1:exon
so has part: feature:3838857-3839003:1:exon
so has part: feature:3841741-3841885:1:exon
so has part: feature:3843067-3843146:1:exon
so has part: feature:3845288-3845422:1:exon
so has part: feature:3849953-3850101:1:exon
so has part: feature:3851332-3852104:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3809573-3810002:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3831170-3831241:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3835688-3835832:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3838857-3839003:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3841741-3841885:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3843067-3843146:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3845288-3845422:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3849953-3850101:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3851332-3852104:1:exon

SLC41A3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: SLC41A3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 41 member 3 isoform X2
translation: MVVTQLNLEFRFQGKKLRGFSCELTRSPYGVFPETAFTVTCQITVPLLLSGLGMMTAGLVMNTVQHWPVFMEVKDLLTLVPPLVGLKGNLEMTLASRLSTAANTGQMDDPREQHRVITSNLALIQVQATVVGFLAAMAALLLGALSRGELDFEKVELLCASSVITAFLAAFALGMLMVCIVIGARKLGVNPDNIATPIAASLGDLITLSILAFFSSFFYKHKDSRYVAPLVCIGLMALTPVWVLTAKRSPPIMEILKFGWFPIILAMMISSFGGLILNKTISKEQYKGMAIFTPIICGVGGNLVAIQTSRISTYLHMWSTPGVLPLWMKKFWPNPCSTFCTSEINSMSARVLLFLVIPGHLIFLYVIYLVEGHSVPNSKTFVVFYLLAGLIQVTILLYLAEVMARLTWHQSLDPDNHCIPYLTGLGDLLGTGLLALCFLISWLLRSEAELDGILEPASAPP
SIO_010081: SLC41A3
subclass of: SO_0000673
so part of: SLC41A3
location: join(3809808..3810002,3816820..3816927,3831170..3831241,3835688..3835832,3838857..3839003,3841741..3841885,3843067..3843146,3845288..3845422,3849953..3850101,3851332..3851541)
location: region:3809808-3851541:1
so has part: feature:3809808-3810002:1:exon
so has part: feature:3816820-3816927:1:exon
so has part: feature:3831170-3831241:1:exon
so has part: feature:3835688-3835832:1:exon
so has part: feature:3838857-3839003:1:exon
so has part: feature:3841741-3841885:1:exon
so has part: feature:3843067-3843146:1:exon
so has part: feature:3845288-3845422:1:exon
so has part: feature:3849953-3850101:1:exon
so has part: feature:3851332-3851541:1:exon

XP_032943286.1
type: Protein
SIO_000068: ncbiprotein

position:3809808:1
position: 3809808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3809808-3810002:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3816820-3816927:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3831170-3831241:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3835688-3835832:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3838857-3839003:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3841741-3841885:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3843067-3843146:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3845288-3845422:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3849953-3850101:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3851332-3851541:1:exon

SLC41A3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: SLC41A3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 41 member 3 isoform X4
translation: MVVTQLNLEFRFQGKKLRGFSCELTRSPYGVFPETAFTVTCQITVPLLLSGLGMMTAGLVMNTVQANTGQMDDPREQHRVITSNLALIQVQATVVGFLAAMAALLLGALSRGELDFEKVELLCASSVITAFLAAFALGMLMVCIVIGARKLGVNPDNIATPIAASLGDLITLSILAFFSSFFYKHKDSRYVAPLVCIGLMALTPVWVLTAKRSPPIMEILKFGWFPIILAMMISSFGGLILNKTISKEQYKGMAIFTPIICGVGGNLVAIQTSRISTYLHMWSTPGVLPLWMKKFWPNPCSTFCTSEINSMSARVLLFLVIPGHLIFLYVIYLVEGHSVPNSKTFVVFYLLAGLIQVTILLYLAEVMARLTWHQSLDPDNHCIPYLTGLGDLLGTGLLALCFLISWLLRSEAELDGILEPASAPP
SIO_010081: SLC41A3
subclass of: SO_0000673
so part of: SLC41A3
location: join(3809808..3810002,3831170..3831241,3835688..3835832,3838857..3839003,3841741..3841885,3843067..3843146,3845288..3845422,3849953..3850101,3851332..3851541)
location: region:3809808-3851541:1
so has part: feature:3809808-3810002:1:exon
so has part: feature:3831170-3831241:1:exon
so has part: feature:3835688-3835832:1:exon
so has part: feature:3838857-3839003:1:exon
so has part: feature:3841741-3841885:1:exon
so has part: feature:3843067-3843146:1:exon
so has part: feature:3845288-3845422:1:exon
so has part: feature:3849953-3850101:1:exon
so has part: feature:3851332-3851541:1:exon

XP_032943288.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3809808-3810002:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3831170-3831241:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3835688-3835832:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3838857-3839003:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3841741-3841885:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3843067-3843146:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3845288-3845422:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3849953-3850101:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3851332-3851541:1:exon

LOC117038672
type: Gene
subclass of: SO_0000704
RO_0002162: 59479
gene: LOC117038672
note: regulator of nonsense transcripts 3B-like; Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(3899083..4001380)
location: region:3899083-4001380:-1
so has part: feature:3899083-4001380:-1:exon

117038672
type: Gene
SIO_000068: ncbigene

position:3899083:-1
position: 3899083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4001380:-1
position: 4001380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3899083-4001380:-1:exon

LOC117038672
type: Exon
subclass of: SO_0000147
RO_0002162: 59479
gene: LOC117038672
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 4% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117038672
subclass of: SO_0000673
so part of: LOC117038672
location: complement(3899083..3900422)
location: region:3899083-3900422:-1
so has part: feature:3899083-3900422:-1:exon

position:3900422:-1
position: 3900422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3899083-3900422:-1:exon

LOC117038672
type: Exon
subclass of: SO_0000147
RO_0002162: 59479
gene: LOC117038672
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 4% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117038672
subclass of: SO_0000673
so part of: LOC117038672
location: complement(4001183..4001380)
location: region:4001183-4001380:-1
so has part: feature:4001183-4001380:-1:exon

position:4001183:-1
position: 4001183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4001183-4001380:-1:exon

LOC117012031
type: Gene
subclass of: SO_0000704
RO_0002162: 59479
gene: LOC117012031
note: small nucleolar RNA SNORA76; Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(4011338..4011468)
location: region:4011338-4011468:-1
so has part: feature:4011338-4011468:-1:exon
subclass of: SO_0000578

117012031
type: Gene
SIO_000068: ncbigene

position:4011338:-1
position: 4011338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4011468:-1
position: 4011468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4011338-4011468:-1:exon

LOC117012031
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59479
nc RNA class: snoRNA
gene: LOC117012031
product: small nucleolar RNA SNORA76
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00598
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004421108.1
SIO_010081: LOC117012031
subclass of: SO_0000673
so part of: LOC117012031
location: complement(4011338..4011468)
location: region:4011338-4011468:-1
so has part: feature:4011338-4011468:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4011338-4011468:-1:exon

LOC117011844
type: Gene
subclass of: SO_0000704
RO_0002162: 59479
gene: LOC117011844
note: GTP-binding nuclear protein Ran-like; Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 4031064..4031691
location: region:4031064-4031691:1
so has part: feature:4031064-4031691:1:exon

117011844
type: Gene
SIO_000068: ncbigene

position:4031064:1
position: 4031064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4031691:1
position: 4031691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4031064-4031691:1:exon

LOC117011844
type: Exon
subclass of: SO_0000147
RO_0002162: 59479
gene: LOC117011844
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 50 Proteins
pseudo: true
SIO_010081: LOC117011844
subclass of: SO_0000673
so part of: LOC117011844
location: 4031064..4031691
location: region:4031064-4031691:1
so has part: feature:4031064-4031691:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4031064-4031691:1:exon

LOC117012013
type: Gene
subclass of: SO_0000704
RO_0002162: 59479
gene: LOC117012013
note: U6 spliceosomal RNA; Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 4055190..4055296
location: region:4055190-4055296:1
so has part: feature:4055190-4055296:1:exon
subclass of: SO_0000623

117012013
type: Gene
SIO_000068: ncbigene

position:4055190:1
position: 4055190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4055296:1
position: 4055296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4055190-4055296:1:exon

LOC117012013
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59479
nc RNA class: snRNA
gene: LOC117012013
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004421092.1
SIO_010081: LOC117012013
subclass of: SO_0000673
so part of: LOC117012013
location: 4055190..4055296
location: region:4055190-4055296:1
so has part: feature:4055190-4055296:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4055190-4055296:1:exon

LOC117011632
type: Gene
subclass of: SO_0000704
RO_0002162: 59479
gene: LOC117011632
note: uncharacterized LOC117011632; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4130979..4163169
location: region:4130979-4163169:1
so has part: feature:4130979-4163169:1:exon
subclass of: SO_0000011

117011632
type: Gene
SIO_000068: ncbigene

position:4130979:1
position: 4130979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4163169:1
position: 4163169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4130979-4163169:1:exon

LOC117011632
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59479
nc RNA class: lncRNA
gene: LOC117011632
product: uncharacterized LOC117011632
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004421039.1
SIO_010081: LOC117011632
subclass of: SO_0000673
so part of: LOC117011632
location: join(4130979..4131045,4139288..4139415,4162999..4163169)
location: region:4130979-4163169:1
so has part: feature:4130979-4131045:1:exon
so has part: feature:4139288-4139415:1:exon
so has part: feature:4162999-4163169:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4130979-4131045:1:exon

position:4131045:1
position: 4131045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4139288-4139415:1:exon

position:4139288:1
position: 4139288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4139415:1
position: 4139415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4162999-4163169:1:exon

position:4162999:1
position: 4162999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MC2R
type: Gene
subclass of: SO_0000704
RO_0002162: 59479
gene: MC2R
note: melanocortin 2 receptor; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4163881..4166155
location: region:4163881-4166155:1
so has part: feature:4163881-4166155:1:exon
subclass of: SO_0000010

117011863
type: Gene
SIO_000068: ncbigene

position:4163881:1
position: 4163881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4166155:1
position: 4166155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4163881-4166155:1:exon

MC2R
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: MC2R
product: melanocortin 2 receptor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 12 Proteins, and 80% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_033087600.1
SIO_010081: MC2R
subclass of: SO_0000673
so part of: MC2R
location: join(4163881..4163990,4164528..4166155)
location: region:4163881-4166155:1
so has part: feature:4163881-4163990:1:exon
so has part: feature:4164528-4166155:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4163881-4163990:1:exon

position:4163990:1
position: 4163990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4164528-4166155:1:exon

position:4164528:1
position: 4164528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MC2R
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: MC2R
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: adrenocorticotropic hormone receptor
translation: MKHIINLYENINNTARNNSDCPHVVLPEEIFFIISIIGVLENLIVLLAVIKNKNLQAPMYFFICSLAISDMLGSLYKILENILIMFRNMGYLKPRGNFETTADDIIDSLFILSLLGSIFSLSVIAADRYITIFHALQYHSIVTMRRAIVVLMVIWICCMCSGITMVIFSHHIPTVITFTSLFPLMLVFILCLYVHMFLLARSHARKISALPRANMKGAITLTILLGVFIVCWAPFVLHVLLMTFCPSNPYCACYMSLFQVNGMLIMCNAVIDPFIYAFRSPELREAFKKMIFCNSYH
SIO_010081: MC2R
subclass of: SO_0000673
so part of: MC2R
location: 4164652..4165545
location: region:4164652-4165545:1
so has part: feature:4164652-4165545:1:exon

XP_032943491.1
type: Protein
SIO_000068: ncbiprotein

position:4164652:1
position: 4164652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4165545:1
position: 4165545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4164652-4165545:1:exon

LOC117011964
type: Gene
subclass of: SO_0000704
RO_0002162: 59479
gene: LOC117011964
note: 60S ribosomal protein L22-like 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4169456..4169829
location: region:4169456-4169829:1
so has part: feature:4169456-4169829:1:exon
subclass of: SO_0000010

117011964
type: Gene
SIO_000068: ncbigene

position:4169456:1
position: 4169456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4169829:1
position: 4169829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4169456-4169829:1:exon

LOC117011964
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: LOC117011964
product: 60S ribosomal protein L22-like 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins
transcript id: XM_033087813.1
SIO_010081: LOC117011964
subclass of: SO_0000673
so part of: LOC117011964
location: 4169456..4169829
location: region:4169456-4169829:1
so has part: feature:4169456-4169829:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4169456-4169829:1:exon

LOC117011964
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: LOC117011964
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; substituted 2 bases at 2 genomic stop codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:4169554..4169556,aa:OTHER)
transl except: (pos:4169566..4169568,aa:OTHER)
product: LOW QUALITY PROTEIN: 60S ribosomal protein L22-like 1
translation: MVPQKVKKPKRSVWKFGLDLTHPVEDXIFDSXNFEXFLQEKVKVNGKTRNLRTAVHIERCKNKMTDASEKLFSKRYLKYLTKKYLKKNSLHDWLHVVASDRETYELRYFQTSQDEDGSESED
SIO_010081: LOC117011964
subclass of: SO_0000673
so part of: LOC117011964
location: 4169462..4169829
location: region:4169462-4169829:1
so has part: feature:4169462-4169829:1:exon

XP_032943704.1
type: Protein
SIO_000068: ncbiprotein

position:4169462:1
position: 4169462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4169462-4169829:1:exon

MC5R
type: Gene
subclass of: SO_0000704
RO_0002162: 59479
gene: MC5R
note: melanocortin 5 receptor; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4265043..4267684)
location: region:4265043-4267684:-1
so has part: feature:4265043-4267684:-1:exon
subclass of: SO_0000010

117011839
type: Gene
SIO_000068: ncbigene

position:4265043:-1
position: 4265043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4267684:-1
position: 4267684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4265043-4267684:-1:exon

MC5R
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: MC5R
product: melanocortin 5 receptor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_033087558.1
SIO_010081: MC5R
subclass of: SO_0000673
so part of: MC5R
location: complement(join(4265043..4266420,4267210..4267300,4267543..4267684))
location: region:4265043-4267684:-1
so has part: feature:4267543-4267684:-1:exon
so has part: feature:4267210-4267300:-1:exon
so has part: feature:4265043-4266420:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4267543-4267684:-1:exon

position:4267543:-1
position: 4267543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4267210-4267300:-1:exon

position:4267210:-1
position: 4267210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4267300:-1
position: 4267300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4265043-4266420:-1:exon

position:4266420:-1
position: 4266420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MC5R
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: MC5R
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: melanocortin receptor 5
translation: MTKGFLNINHGREIGRKRSDLPLILVHLLPRREAMNSSFHLYFLDFNLNATEGNLSEPNVKNKSSPCEEMGIAVEVFLTLGLISLLENILVISAIVKNKNLHSPMYFFVCSLAVADMLVSMSNVWETITIYLINNKHLVMADAFVHHIDNVFDSMICISVVASMCSLLAIAVDRYVTVFYALRYHHIMTVKRSGVIIACIWTFCTGCGIVFIIYYESTYVIICLISMFFTMLFLMVSLYIHMFLLAQTHVKRIAALPGYSSVWQRTSMKGAITVTMLLGIFIVCWAPFFLHLILMISCPQNLYCSCFMSHFNMYLILIMCNSVIDPLIYAFRSQEMRKTFKEIICCHSFRIPCKFPSRY
SIO_010081: MC5R
subclass of: SO_0000673
so part of: MC5R
location: complement(join(4265417..4266420,4267210..4267285))
location: region:4265417-4267285:-1
so has part: feature:4267210-4267285:-1:exon
so has part: feature:4265417-4266420:-1:exon

XP_032943449.1
type: Protein
SIO_000068: ncbiprotein

position:4265417:-1
position: 4265417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4267285:-1
position: 4267285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4267210-4267285:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4265417-4266420:-1:exon

RNMT
type: Gene
subclass of: SO_0000704
RO_0002162: 59479
gene: RNMT
note: RNA guanine-7 methyltransferase; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4297004..4325944)
location: region:4297004-4325944:-1
so has part: feature:4297004-4325944:-1:exon
subclass of: SO_0000010

117011753
type: Gene
SIO_000068: ncbigene

position:4297004:-1
position: 4297004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4325944:-1
position: 4325944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4297004-4325944:-1:exon

RNMT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: RNMT
product: RNA guanine-7 methyltransferase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_033087416.1
SIO_010081: RNMT
subclass of: SO_0000673
so part of: RNMT
location: complement(join(4297004..4297885,4301023..4301056,4302023..4302124,4305964..4306081,4314781..4314945,4315259..4315440,4316424..4316536,4318769..4318894,4321404..4321539,4322946..4323361,4325840..4325918))
location: region:4297004-4325918:-1
so has part: feature:4325840-4325918:-1:exon
so has part: feature:4322946-4323361:-1:exon
so has part: feature:4321404-4321539:-1:exon
so has part: feature:4318769-4318894:-1:exon
so has part: feature:4316424-4316536:-1:exon
so has part: feature:4315259-4315440:-1:exon
so has part: feature:4314781-4314945:-1:exon
so has part: feature:4305964-4306081:-1:exon
so has part: feature:4302023-4302124:-1:exon
so has part: feature:4301023-4301056:-1:exon
so has part: feature:4297004-4297885:-1:exon

position:4325918:-1
position: 4325918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4325840-4325918:-1:exon

position:4325840:-1
position: 4325840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4322946-4323361:-1:exon

position:4322946:-1
position: 4322946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4323361:-1
position: 4323361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4321404-4321539:-1:exon

position:4321404:-1
position: 4321404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4321539:-1
position: 4321539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4318769-4318894:-1:exon

position:4318769:-1
position: 4318769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4318894:-1
position: 4318894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4316424-4316536:-1:exon

position:4316424:-1
position: 4316424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4316536:-1
position: 4316536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4315259-4315440:-1:exon

position:4315259:-1
position: 4315259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4315440:-1
position: 4315440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4314781-4314945:-1:exon

position:4314781:-1
position: 4314781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4314945:-1
position: 4314945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4305964-4306081:-1:exon

position:4305964:-1
position: 4305964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4306081:-1
position: 4306081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4302023-4302124:-1:exon

position:4302023:-1
position: 4302023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4302124:-1
position: 4302124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4301023-4301056:-1:exon

position:4301023:-1
position: 4301023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4301056:-1
position: 4301056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4297004-4297885:-1:exon

position:4297885:-1
position: 4297885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RNMT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: RNMT
product: RNA guanine-7 methyltransferase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 mRNAs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_033087415.1
SIO_010081: RNMT
subclass of: SO_0000673
so part of: RNMT
location: complement(join(4297572..4297885,4301023..4301056,4302023..4302124,4305964..4306081,4314781..4314945,4315259..4315440,4316424..4316536,4318769..4318894,4321404..4321539,4322946..4323401,4325840..4325944))
location: region:4297572-4325944:-1
so has part: feature:4325840-4325944:-1:exon
so has part: feature:4322946-4323401:-1:exon
so has part: feature:4321404-4321539:-1:exon
so has part: feature:4318769-4318894:-1:exon
so has part: feature:4316424-4316536:-1:exon
so has part: feature:4315259-4315440:-1:exon
so has part: feature:4314781-4314945:-1:exon
so has part: feature:4305964-4306081:-1:exon
so has part: feature:4302023-4302124:-1:exon
so has part: feature:4301023-4301056:-1:exon
so has part: feature:4297572-4297885:-1:exon

position:4297572:-1
position: 4297572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4325840-4325944:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4322946-4323401:-1:exon

position:4323401:-1
position: 4323401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4321404-4321539:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4318769-4318894:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4316424-4316536:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4315259-4315440:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4314781-4314945:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4305964-4306081:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4302023-4302124:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4301023-4301056:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4297572-4297885:-1:exon

RNMT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: RNMT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mRNA cap guanine-N7 methyltransferase
translation: MEFADGLVKESSSCGEDTPSKKRKLDTETVSEEKGSGDDEGISKKRRMETDDFPKDEASTGYGTQERRKIGLEDAPEKQKILEEGHSSAVAAHYNELQEVGLEKRSQSRIFYLRNFNNWMKSVLIGEFLENLRQKKKRDISVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDNEYIFNAEFITADCSKELLIDKFHDPEMCFDICSCQFVCHYSFESYEQADTMLRNACERLSPGGYFIGTTPNSFELIRRLETSETESFGNEIYTVKFQKKGSYPLFGCKYDFKLEGVVDVPEFLVYFPLLTEMVKKYNMKLVYKKTFLEFYEEKIKNNENKMLLKRMQALEPYPADENSKLTSEKVDDYEHAAKYMKNSQVRLPLGTLSKSEWEATSIYLVFAFEKQQ
SIO_010081: RNMT
subclass of: SO_0000673
so part of: RNMT
location: complement(join(4297848..4297885,4301023..4301056,4302023..4302124,4305964..4306081,4314781..4314945,4315259..4315440,4316424..4316536,4318769..4318894,4321404..4321539,4322946..4323185))
location: region:4297848-4323185:-1
so has part: feature:4322946-4323185:-1:exon
so has part: feature:4321404-4321539:-1:exon
so has part: feature:4318769-4318894:-1:exon
so has part: feature:4316424-4316536:-1:exon
so has part: feature:4315259-4315440:-1:exon
so has part: feature:4314781-4314945:-1:exon
so has part: feature:4305964-4306081:-1:exon
so has part: feature:4302023-4302124:-1:exon
so has part: feature:4301023-4301056:-1:exon
so has part: feature:4297848-4297885:-1:exon

XP_032943306.1
type: Protein
SIO_000068: ncbiprotein

position:4297848:-1
position: 4297848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4323185:-1
position: 4323185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4322946-4323185:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4321404-4321539:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4318769-4318894:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4316424-4316536:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4315259-4315440:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4314781-4314945:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4305964-4306081:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4302023-4302124:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4301023-4301056:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4297848-4297885:-1:exon

RNMT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59479
gene: RNMT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mRNA cap guanine-N7 methyltransferase
translation: MEFADGLVKESSSCGEDTPSKKRKLDTETVSEEKGSGDDEGISKKRRMETDDFPKDEASTGYGTQERRKIGLEDAPEKQKILEEGHSSAVAAHYNELQEVGLEKRSQSRIFYLRNFNNWMKSVLIGEFLENLRQKKKRDISVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDNEYIFNAEFITADCSKELLIDKFHDPEMCFDICSCQFVCHYSFESYEQADTMLRNACERLSPGGYFIGTTPNSFELIRRLETSETESFGNEIYTVKFQKKGSYPLFGCKYDFKLEGVVDVPEFLVYFPLLTEMVKKYNMKLVYKKTFLEFYEEKIKNNENKMLLKRMQALEPYPADENSKLTSEKVDDYEHAAKYMKNSQVRLPLGTLSKSEWEATSIYLVFAFEKQQ
SIO_010081: RNMT
subclass of: SO_0000673
so part of: RNMT
location: complement(join(4297848..4297885,4301023..4301056,4302023..4302124,4305964..4306081,4314781..4314945,4315259..4315440,4316424..4316536,4318769..4318894,4321404..4321539,4322946..4323185))
location: region:4297848-4323185:-1
so has part: feature:4322946-4323185:-1:exon
so has part: feature:4321404-4321539:-1:exon
so has part: feature:4318769-4318894:-1:exon
so has part: feature:4316424-4316536:-1:exon
so has part: feature:4315259-4315440:-1:exon
so has part: feature:4314781-4314945:-1:exon
so has part: feature:4305964-4306081:-1:exon
so has part: feature:4302023-4302124:-1:exon
so has part: feature:4301023-4301056:-1:exon
so has part: feature:4297848-4297885:-1:exon

XP_032943307.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4322946-4323185:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4321404-4321539:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4318769-4318894:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4316424-4316536:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4315259-4315440:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4314781-4314945:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4305964-4306081:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4302023-4302124:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4301023-4301056:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4297848-4297885:-1:exon

FAM210A
type: Gene
subclass of: SO_0000704
RO_0002162: 59479
gene: FAM210A
note: family with sequence similarity 210 member A; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4326002..4367116
location: region:4326002-4367116:1
so has part: feature:4326002-4367116:1:exon
subclass of: SO_0000010

117011981
type: Gene
SIO_000068: ncbigene

position:4326002:1
position: 4326002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4367116:1
position: 4367116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4326002-4367116:1:exon

FAM210A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59479
gene: FAM210A
product: family with sequence similarity 210 member A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_033087878.1
SIO_010081: FAM210A
subclass of: SO_0000673
so part of: FAM210A
location: join(4326002..4326236,4355496..4355994,4361251..4361362,4365898..4367116)
location: region:4326002-4367116:1
so has part: feature:4326002-4326236:1:exon
so has part: feature:4355496-4355994:1:exon
so has part: feature:4361251-4361362:1:exon
so has part: feature:4365898-4367116:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4326002-4326236:1:exon

position:4326236:1
position: 4326236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4355496-4355994:1:exon