Theileria annulata chromosome 1, complete sequence, *** SEQUENCING IN PROGRESS ***.
Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Piroplasmida; Theileriidae; Theileria.
Genome of the host-cell transforming parasite Theileria annulata compared with T. parva
Submitted (29-JAN-2021) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA
Submitted (31-MAR-2005) The Wellcome Trust Sanger Institute Genome Campus, Hinxton, Cambridge CB10 1SA, UK
PROVISIONAL REFSEQ: This record has not yet been subject to final\nNCBI review. The reference sequence is identical to CR940347.\nOn Jan 27, 2021 this sequence version replaced NC_011129.1.\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: INSDC submitter\nAnnotation Status :: Full annotation\nAnnotation Pipeline :: Eukaryotic Annotation Propagation Pipeline\n##Genome-Annotation-Data-END##\n* NOTE: This is a 'working draft' sequence. It currently\n* consists of 1 contigs. Gaps between the contigs\n* are represented as runs of N. The order of the pieces\n* is believed to be correct as given, however the sizes\n* of the gaps between them are based on estimates that have\n* provided by the submitter.\n* This sequence will be replaced\n* by the finished sequence as soon as it is available and\n* the accession number will be preserved.\n* 1 2592520: contig of 2592520 bp in length.
SfiI-subtelomeric fragment related protein family member, putative
TapBAC05a05.q1k.C.cand.2 - score = 17.54
TapBAC05a05.q1k.C.cand.1 - score = 157.72; Signal peptide predicted for TA17505 by SignalP 2.0 HMM (Signal peptide probability 0.965, signal anchor probability 0.000) with cleavage site probability 0.887 between residues 25 and 26
Signal peptide predicted for TA17505 by SignalP 2.0 HMM (Signal peptide probability 0.965, signal anchor probability 0.000) with cleavage site probability 0.887 between residues 25 and 26
phosphatidylserine decarboxylase, putative
Tap465h02.q1ca.cand.26 - score = 13.62; SMART pfam:PS_Dcarbxylase (PF02666) at aa 38-209, E()=6.20e-28; 1 probable transmembrane helix predicted for TA09760 by TMHMM2.0 at aa 23-45; Signal anchor predicted for TA09760 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 1.000) with cleavage site probability 0.000 between residues 28 and 29
1 probable transmembrane helix predicted for TA09760 by TMHMM2.0 at aa 23-45
Signal anchor predicted for TA09760 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 1.000) with cleavage site probability 0.000 between residues 28 and 29
Signal peptide predicted for TA09756 by SignalP 2.0 HMM (Signal peptide probability 0.991, signal anchor probability 0.000) with cleavage site probability 0.845 between residues 18 and 19; GPI-Anchor Signal predicted for TA09756 by DGPI v2.04 with cleavage site probability 1.72 near 145
Signal peptide predicted for TA09756 by SignalP 2.0 HMM (Signal peptide probability 0.991, signal anchor probability 0.000) with cleavage site probability 0.845 between residues 18 and 19
GPI-Anchor Signal predicted for TA09756 by DGPI v2.04 with cleavage site probability 1.72 near 145
Tap465h02.q1ca.C.cand.2 - score = 9.39; Signal peptide predicted for TA09755 by SignalP 2.0 HMM (Signal peptide probability 0.965, signal anchor probability 0.000) with cleavage site probability 0.665 between residues 20 and 21
Signal peptide predicted for TA09755 by SignalP 2.0 HMM (Signal peptide probability 0.965, signal anchor probability 0.000) with cleavage site probability 0.665 between residues 20 and 21
SMART 2 transmembrane domains at aa 431-453 and 461-488; 2 probable transmembrane helices predicted for TA09740 by TMHMM2.0 at aa 431-453 and 466-488
2 probable transmembrane helices predicted for TA09740 by TMHMM2.0 at aa 431-453 and 466-488
SMART 2 transmembrane domains at aa 95-117 and 179-201; 2 probable transmembrane helices predicted for TA09725 by TMHMM2.0 at aa 95-117 and 179-201
2 probable transmembrane helices predicted for TA09725 by TMHMM2.0 at aa 95-117 and 179-201
Tap465h02.q1ca.C.cand.5 - score = 9.33; 1 probable transmembrane helix predicted for TA09720 by TMHMM2.0 at aa 13-35; Signal anchor predicted for TA09720 by SignalP 2.0 HMM (Signal peptide probability 0.069, signal anchor probability 0.925) with cleavage site probability 0.033 between residues 28 and 29
Signal anchor predicted for TA09720 by SignalP 2.0 HMM (Signal peptide probability 0.069, signal anchor probability 0.925) with cleavage site probability 0.033 between residues 28 and 29
1 probable transmembrane helix predicted for TA09720 by TMHMM2.0 at aa 13-35
cell-cycle-control protein (translation regulation), putative
SMART pfam:Exo_endo_phos (PF03372) at aa 5-364, E()=3.10e-23
Tap465h02.q1ca.C.cand.10 - score = 15.35; Signal peptide predicted for TA09675 by SignalP 2.0 HMM (Signal peptide probability 1.000, signal anchor probability 0.000) with cleavage site probability 0.965 between residues 17 and 18
Signal peptide predicted for TA09675 by SignalP 2.0 HMM (Signal peptide probability 1.000, signal anchor probability 0.000) with cleavage site probability 0.965 between residues 17 and 18
Tap465h02.q1ca.cand.17 - score = 9.65; Signal peptide predicted for TA09670 by SignalP 2.0 HMM (Signal peptide probability 0.682, signal anchor probability 0.000) with cleavage site probability 0.519 between residues 20 and 21
Signal peptide predicted for TA09670 by SignalP 2.0 HMM (Signal peptide probability 0.682, signal anchor probability 0.000) with cleavage site probability 0.519 between residues 20 and 21
Tap465h02.q1ca.C.cand.11 - score = 9.54; SMART pfam:ribonuc_red_sm (PF00268) at aa 18-299, E()=3.20e-11; 1 probable transmembrane helix predicted for TA09665 by TMHMM2.0 at aa 175-197
1 probable transmembrane helix predicted for TA09665 by TMHMM2.0 at aa 175-197
SMART pfam:EMP24_GP25L (PF01105) at aa 4.00e-06; 2 probable transmembrane helices predicted for TA09660 by TMHMM2.0 at aa 10-29 and 176-198; Signal peptide predicted for TA09660 by SignalP 2.0 HMM (Signal peptide probability 0.728, signal anchor probability 0.242) with cleavage site probability 0.670 between residues 23 and 24; GPI-Anchor Signal predicted for TA09660 by DGPI v2.04 with cleavage site probability 0.11019999 near 173
2 probable transmembrane helices predicted for TA09660 by TMHMM2.0 at aa 10-29 and 176-198
GPI-Anchor Signal predicted for TA09660 by DGPI v2.04 with cleavage site probability 0.11019999 near 173
Signal peptide predicted for TA09660 by SignalP 2.0 HMM (Signal peptide probability 0.728, signal anchor probability 0.242) with cleavage site probability 0.670 between residues 23 and 24
cyclin-dependent kinase regulatory subunit, putative
Tpr-related protein family member, putative
6 probable transmembrane helices predicted for TA09600 by TMHMM2.0 at aa 139-161, 232-250, 371-388, 422-444, 451-468 and 899-921
Tap465h02.q1ca.cand.8 - score = 24.51; SMART pfam:ldh (PF00056) at aa 5-198, E()=2.20e-12; pfam:ldh_C (PF02866) at aa 200-366, E()=2.80e-42; high sequence similarity between lactate- and malate- dehydrogenases but distinguished by comparison to respective enzyme sequences from S. pombe
SMART 2 transmembrane domains aa 15-37 and 156-178
SMART 3 EGF (SM0181) domains at aa 23-60, E()=1.00e+01; 78-112, E()=1.47e+01; 117-156, E()=3.57e+01; 1 transmembrane domain at aa 191-213; 1 probable transmembrane helix predicted for TA09570 by TMHMM2.0 at aa 191-213
1 probable transmembrane helix predicted for TA09570 by TMHMM2.0 at aa 191-213
Tap465h02.q1ca.C.cand.17 - score = 16.90; SMART pfam:Acetyltransf (PF00583) at aa 222-304, E()=3.50e-03
Tap465h02.q1ca.C.cand.18 - score = 261.97; SMART 2 transmembrane domains at aa 1475-1497, 1510-1532; 2 probable transmembrane helices predicted for TA09560 by TMHMM2.0 at aa 1475-1497 and 1510-1532
2 probable transmembrane helices predicted for TA09560 by TMHMM2.0 at aa 1475-1497 and 1510-1532
ethanolamine phosphotransferase, putative
Tap465h02.q1ca.cand.1 - score = 7.05; SMART 1 transmembrane domain at aa 33-55; 1 probable transmembrane helix predicted for TA09520 by TMHMM2.0 at aa 33-55; Signal anchor predicted for TA09520 by SignalP 2.0 HMM (Signal peptide probability 0.001, signal anchor probability 0.928) with cleavage site probability 0.000 between residues 47 and 48
1 probable transmembrane helix predicted for TA09520 by TMHMM2.0 at aa 33-55
Signal anchor predicted for TA09520 by SignalP 2.0 HMM (Signal peptide probability 0.001, signal anchor probability 0.928) with cleavage site probability 0.000 between residues 47 and 48
RNA-binding protein (U1 snRNP-like), putative
serine/threonine protein kinase, putative
Tap821d03.p1c.cand.110 - score = 89.30; SMART 3 transmembrane domains at aa 183-205, 552-569 and 701-723; STYKc (SM00221) at aa 964-1404, E()=1.34e-04; 3 probable transmembrane helices predicted for TA16695 by TMHMM2.0 at aa 183-205, 552-569 and 701-723
3 probable transmembrane helices predicted for TA16695 by TMHMM2.0 at aa 183-205, 552-569 and 701-723
SMART pfam:DEAD (PF00270) at aa 136-341, E()=2.30e-02; HELICc (SM00490) at aa 355-446, E()=4.81e-15; Signal peptide predicted for TA16680 by SignalP 2.0 HMM (Signal peptide probability 0.916, signal anchor probability 0.000) with cleavage site probability 0.848 between residues 15 and 16; GPI-Anchor Signal predicted for TA16680 by DGPI v2.04, no cleavage site predicted
Signal peptide predicted for TA16680 by SignalP 2.0 HMM (Signal peptide probability 0.916, signal anchor probability 0.000) with cleavage site probability 0.848 between residues 15 and 16
Tap821d03.p1c.cand.107 - score = 92.14; SMART transmembrane domain at 41-63; 1 probable transmembrane helix predicted for TA16660 by TMHMM2.0 at aa 41-63
1 probable transmembrane helix predicted for TA16660 by TMHMM2.0 at aa 41-63
Fe/Mn superoxide dismutase (SOD), putative
Tap821d03.p1c.cand.104 - score = 25.13; SMART 2 transmembrane domains at aa 79-96 and 244-266; DnaJ (SM00271) at aa 127-184, E()=2.45e-22; 2 probable transmembrane helices predicted for TA16620 by TMHMM2.0 at aa 79-96 and 244-266
2 probable transmembrane helices predicted for TA16620 by TMHMM2.0 at aa 79-96 and 244-266
SMART 4 transmembrane domains at aa 416-438, 473-495, 560-582 and 592-614; 5 probable transmembrane helices predicted for TA16615 by TMHMM2.0 at aa 20-39, 416-438, 473-495, 560-582 and 592-614
5 probable transmembrane helices predicted for TA16615 by TMHMM2.0 at aa 20-39, 416-438, 473-495, 560-582 and 592-614
Tap821d03.p1c.cand.101 - score = 30.82; SMART 1 transmembrane domain at aa 324-346; 1 probable transmembrane helix predicted for TA16605 by TMHMM2.0 at aa 324-346
1 probable transmembrane helix predicted for TA16605 by TMHMM2.0 at aa 324-346
Tap821d03.p1c.C.cand.12 - score = 19.17; SMART 1 transmembrane domain at aa 5-27; 1 probable transmembrane helix predicted for TA16600 by TMHMM2.0 at aa 5-27
1 probable transmembrane helix predicted for TA16600 by TMHMM2.0 at aa 5-27
Tap821d03.p1c.cand.99 - score = 21.06; Signal peptide predicted for TA16580 by SignalP 2.0 HMM (Signal peptide probability 0.991, signal anchor probability 0.000) with cleavage site probability 0.579 between residues 17 and 18
Signal peptide predicted for TA16580 by SignalP 2.0 HMM (Signal peptide probability 0.991, signal anchor probability 0.000) with cleavage site probability 0.579 between residues 17 and 18
Tap821d03.p1c.cand.98 - score = 18.91; Signal peptide predicted for TA16565 by SignalP 2.0 HMM (Signal peptide probability 0.884, signal anchor probability 0.000) with cleavage site probability 0.376 between residues 17 and 18; GPI-Anchor Signal predicted for TA16565 by DGPI v2.04 with cleavage site probability 0.152 near 202
GPI-Anchor Signal predicted for TA16565 by DGPI v2.04 with cleavage site probability 0.152 near 202
Signal peptide predicted for TA16565 by SignalP 2.0 HMM (Signal peptide probability 0.884, signal anchor probability 0.000) with cleavage site probability 0.376 between residues 17 and 18
Tap821d03.p1c.C.cand.15 - score = 24.65; SMART 1 transmembrane domain at aa 368-390; 1 probable transmembrane helix predicted for TA16555 by TMHMM2.0 at aa 368-390
1 probable transmembrane helix predicted for TA16555 by TMHMM2.0 at aa 368-390
Tap821d03.p1c.cand.96 - score = 10.41; SMART pfam:Acylphosphatase (PF00708) at aa 3-91, E()=1.20e-16
Tap821d03.p1c.cand.94 - score = 10.73; SMART 3 transmembrane domains at aa 19-36, 51-73 and 164-182; pfam:DUF250 (PF03151) at aa 204-372, E()=1.90e-02; pfam:DUF6 (PF00892) at aa 230-360, E()=2.20e- 06; 9 probable transmembrane helices predicted for TA16525 by TMHMM2.0 at aa 19-36, 51-73, 164-182, 187-206, 219-238, 253-275, 287-309, 314-336 and 343-361; Signal anchor predicted for TA16525 by SignalP 2.0 HMM (Signal peptide probability 0.003, signal anchor probability 0.995) with cleavage site probability 0.003 between residues 33 and 34
Signal anchor predicted for TA16525 by SignalP 2.0 HMM (Signal peptide probability 0.003, signal anchor probability 0.995) with cleavage site probability 0.003 between residues 33 and 34
ubiquitin-fusion degradation pathway component, UFD1
Tap821d03.p1c.C.cand.21 - score = 23.26; SMART pfam:UFD1 (PF03152) at aa 156-318, E()=7.40e-07; Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal peptide predicted for TA16520 by SignalP 2.0 HMM (Signal peptide probability 0.772, signal anchor probability 0.032) with cleavage site probability 0.595 between residues 29 and 30
Signal peptide predicted for TA16520 by SignalP 2.0 HMM (Signal peptide probability 0.772, signal anchor probability 0.032) with cleavage site probability 0.595 between residues 29 and 30
orotidine 5'-phosphate decarboxylase, putative
phosphatidylglycerophosphate synthase, putative
ribosomal protein L23 (or L25), putative
metalloprotease/cell division cycle protein (FtsH)
Tap821d03.p1c.C.cand.28 - score = 78.41; SMART 1 transmembrane domain at aa 159-181; AAA (SM00382) at aa 263-403, E()=5.27e-25; pam:Peptidase_M41 (PF01434) at aa 461-666, E()=3.80e-73; 1 probable transmembrane helix predicted for TA16460 by TMHMM2.0 at aa 159-181
1 probable transmembrane helix predicted for TA16460 by TMHMM2.0 at aa 159-181
chloroplast ribosomal protein L1 or 50S ribosomal protein L10, putative
Tap821d03.p1c.C.cand.32 - score = 18.69; Signal peptide predicted for TA16420 by SignalP 2.0 HMM (Signal peptide probability 0.671, signal anchor probability 0.000) with cleavage site probability 0.640 between residues 17 and 18
Signal peptide predicted for TA16420 by SignalP 2.0 HMM (Signal peptide probability 0.671, signal anchor probability 0.000) with cleavage site probability 0.640 between residues 17 and 18
chaperonin (T-complex protein 1 (TCP1), theta subunit)
ADP-ribosylation factor (ARF) GTP-ase activating protein, putative
mitochondrial phosphate carrier protein, putative
Tap821d03.p1c.cand.74 - score = 33.27; SMART pfam:pro_isomerase (PF00160) at aa 8-202, E()=4.30e-21
translation elongation factor E1-F beta, putative
eukaryotic translation initiation factor 3 (eIF3), subunit, putative
Tap821d03.p1c.cand.70 - score = 58.73; Signal peptide predicted for TA16270 by SignalP 2.0 HMM (Signal peptide probability 0.910, signal anchor probability 0.000) with cleavage site probability 0.630 between residues 25 and 26
Signal peptide predicted for TA16270 by SignalP 2.0 HMM (Signal peptide probability 0.910, signal anchor probability 0.000) with cleavage site probability 0.630 between residues 25 and 26
apoptosis regulatory protein (programmed cell death protein 2 (PCDC2))
Tap821d03.p1c.cand.67 - score = 16.82; Signal peptide predicted for TA16250 by SignalP 2.0 HMM (Signal peptide probability 0.673, signal anchor probability 0.178) with cleavage site probability 0.328 between residues 30 and 31
Signal peptide predicted for TA16250 by SignalP 2.0 HMM (Signal peptide probability 0.673, signal anchor probability 0.178) with cleavage site probability 0.328 between residues 30 and 31
nucleosome assembly protein (NAP), putative
haloacid dehalogenase-like family hydrolase, putative
Tap821d03.p1c.cand.64 - score = 23.63; 1 probable transmembrane helix predicted for TA16220 by TMHMM2.0 at aa 7-29; Signal peptide predicted for TA16220 by SignalP 2.0 HMM (Signal peptide probability 0.992, signal anchor probability 0.008) with cleavage site probability 0.977 between residues 26 and 27
1 probable transmembrane helix predicted for TA16220 by TMHMM2.0 at aa 7-29
Signal peptide predicted for TA16220 by SignalP 2.0 HMM (Signal peptide probability 0.992, signal anchor probability 0.008) with cleavage site probability 0.977 between residues 26 and 27
Tap821d03.p1c.cand.63 - score = 19.62; SMART pfam:Hydrolase (PF00702) at aa 33-267, E()=1.20e-02; Signal peptide predicted for TA16215 by SignalP 2.0 HMM (Signal peptide probability 0.985, signal anchor probability 0.000) with cleavage site probability 0.934 between residues 20 and 21
Signal peptide predicted for TA16215 by SignalP 2.0 HMM (Signal peptide probability 0.985, signal anchor probability 0.000) with cleavage site probability 0.934 between residues 20 and 21
SMART 1 transmembrane domain at aa 91-113; 1 probable transmembrane helix predicted for TA16210 by TMHMM2.0 at aa 91-113; GPI-Anchor Signal predicted for TA16210 by DGPI v2.04, no cleavage site predicted
1 probable transmembrane helix predicted for TA16210 by TMHMM2.0 at aa 91-113
Tap821d03.p1c.C.cand.44 - score = 22.81; Signal peptide predicted for TA16205 by SignalP 2.0 HMM (Signal peptide probability 0.779, signal anchor probability 0.000) with cleavage site probability 0.427 between residues 21 and 22
Signal peptide predicted for TA16205 by SignalP 2.0 HMM (Signal peptide probability 0.779, signal anchor probability 0.000) with cleavage site probability 0.427 between residues 21 and 22
Signal peptide predicted for TA16200 by SignalP 2.0 HMM (Signal peptide probability 0.812, signal anchor probability 0.000) with cleavage site probability 0.526 between residues 17 and 18
Tap821d03.p1c.cand.61 - score = 23.28; SMART pfam:Hydrolase (PF00702) at aa 29-263, E()=4.00e-02; Signal peptide predicted for TA16195 by SignalP 2.0 HMM (Signal peptide probability 0.979, signal anchor probability 0.005) with cleavage site probability 0.746 between residues 16 and 17
Signal peptide predicted for TA16195 by SignalP 2.0 HMM (Signal peptide probability 0.979, signal anchor probability 0.005) with cleavage site probability 0.746 between residues 16 and 17
Tap821d03.p1c.cand.60 - score = 24.07; Signal peptide predicted for TA16190 by SignalP 2.0 HMM (Signal peptide probability 0.979, signal anchor probability 0.005) with cleavage site probability 0.746 between residues 16 and 17
Signal peptide predicted for TA16190 by SignalP 2.0 HMM (Signal peptide probability 0.979, signal anchor probability 0.005) with cleavage site probability 0.746 between residues 16 and 17
SMART pfam:Hydrolase (PF00702) at aa 14-249, E()=1.60e-02
calmodulin-like domain protein kinase, putative
queuine tRNA-ribosyltransferase, putative
ubiquitin/60S ribosomal fusion protein, putative
Tap821d03.p1c.C.cand.46 - score = 29.09; SMART pfam:sugar_tr (PF00081) at aa 12-473, E()=2.80e-34; 12 probable transmembrane helices predicted for TA16160 by TMHMM2.0 at aa 7-29, 58-80, 92-114, 118-140, 147-169, 189-211, 279-301, 316-338, 345-363, 378-400, 413-435 and 440-462; Signal peptide predicted for TA16160 by SignalP 2.0 HMM (Signal peptide probability 0.961, signal anchor probability 0.018) with cleavage site probability 0.293 between residues 24 and 25
Signal peptide predicted for TA16160 by SignalP 2.0 HMM (Signal peptide probability 0.961, signal anchor probability 0.018) with cleavage site probability 0.293 between residues 24 and 25
SMART 5 transmembrane domains at aa 63-82, 103-125, 140-170, 226-245 and 260-282; 5 probable transmembrane helices predicted for TA16150 by TMHMM2.0 at aa 63-82, 103-125, 140-170, 226-245 and 260-282
5 probable transmembrane helices predicted for TA16150 by TMHMM2.0 at aa 63-82, 103-125, 140-170, 226-245 and 260-282
Tap821d03.p1c.cand.53 - score = 24.75; SMART pfam:DnaJ (PF00226) at aa 58-126, E()=4.00e-03; 5 transmembrane domains at aa 5-27, 138-160 173-195, 210-232 and 333-355; 5 probable transmembrane helices predicted for TA16145 by TMHMM2.0 at aa 5-27, 138-160, 173-195, 210-232 and 333-355; Signal peptide predicted for TA16145 by SignalP 2.0 HMM (Signal peptide probability 0.636, signal anchor probability 0.002) with cleavage site probability 0.267 between residues 16 and 17; GPI-Anchor Signal predicted for TA16145 by DGPI v2.04, no cleavage site predicted
5 probable transmembrane helices predicted for TA16145 by TMHMM2.0 at aa 5-27, 138-160, 173-195, 210-232 and 333-355
Signal peptide predicted for TA16145 by SignalP 2.0 HMM (Signal peptide probability 0.636, signal anchor probability 0.002) with cleavage site probability 0.267 between residues 16 and 17
Tap821d03.p1c.C.cand.49 - score = 44.21; SMART SANT (SM00717) at aa 209-263, E()=2.74e-02; ZnF_NFX (SM00438) at aa 476-496, E()=0.00e+00; 1 transmembrane domain at aa 600-622; 1 probable transmembrane helix predicted for TA17095 by TMHMM2.0 at aa 600-622
1 probable transmembrane helix predicted for TA17095 by TMHMM2.0 at aa 600-622
Tap821d03.p1c.C.cand.54 - score = 13.99; Signal peptide predicted for TA17055 by SignalP 2.0 HMM (Signal peptide probability 0.993, signal anchor probability 0.001) with cleavage site probability 0.417 between residues 16 and 17
Signal peptide predicted for TA17055 by SignalP 2.0 HMM (Signal peptide probability 0.993, signal anchor probability 0.001) with cleavage site probability 0.417 between residues 16 and 17
merozoite-piroplasm surface antigen Tams1
Tap821d03.p1c.cand.48 - score = 27.39; SMART pfam:EMA (PF02408) at aa 1-280, E()=1.40e-191; 1 probable transmembrane helix predicted for TA17050 by TMHMM2.0 at aa 261-280; Signal peptide predicted for TA17050 by SignalP 2.0 HMM (Signal peptide probability 0.995, signal anchor probability 0.002) with cleavage site probability 0.953 between residues 22 and 23; GPI-Anchor Signal predicted for TA17050 by DGPI v2.04 with cleavage site probability 1.1019999 near 247
1 probable transmembrane helix predicted for TA17050 by TMHMM2.0 at aa 261-280
GPI-Anchor Signal predicted for TA17050 by DGPI v2.04 with cleavage site probability 1.1019999 near 247
Signal peptide predicted for TA17050 by SignalP 2.0 HMM (Signal peptide probability 0.995, signal anchor probability 0.002) with cleavage site probability 0.953 between residues 22 and 23
3' exonuclease, exosome component, putative
iron-responsive element binding protein/aconitase, putative
GTP-binding protein, LepA subfamily, putative
ATP-dependent Clp-like protease, putative
Tap821d03.p1c.C.cand.66 - score = 25.07; SMART 1 transmembrane domain at aa 5-27; 1 probable transmembrane helix predicted for TA16905 by TMHMM2.0 at aa 5-27
1 probable transmembrane helix predicted for TA16905 by TMHMM2.0 at aa 5-27
Tap821d03.p1c.cand.30 - score = 24.73; SMART 11 transmembrane domains at aa 20-39, 221-243, 253-275, 282-304, 319-341, 353-375, 379-401, 406-428, 453-475, 496-515 and 525-547; 11 probable transmembrane helices predicted for TA16895 by TMHMM2.0 at aa 20-39, 221-243, 253-275, 282-304, 319-341, 353-375, 379-401, 406-428, 453-475, 496-515 and 525-547; Signal anchor predicted for TA16895 by SignalP 2.0 HMM (Signal peptide probability 0.022, signal anchor probability 0.834) with cleavage site probability 0.006 between residues 41 and 42
Signal anchor predicted for TA16895 by SignalP 2.0 HMM (Signal peptide probability 0.022, signal anchor probability 0.834) with cleavage site probability 0.006 between residues 41 and 42
Tap821d03.p1c.C.cand.67 - score = 23.12; SMART 1 transmembrane domain at aa 31-53; RING (SM00184) at aa 382-418, E()=1.79e-06; 1 probable transmembrane helix predicted for TA16880 by TMHMM2.0 at aa 31-53; Signal anchor predicted for TA16880 by SignalP 2.0 HMM (Signal peptide probability 0.002, signal anchor probability 0.903) with cleavage site probability 0.001 between residues 55 and 56
Signal anchor predicted for TA16880 by SignalP 2.0 HMM (Signal peptide probability 0.002, signal anchor probability 0.903) with cleavage site probability 0.001 between residues 55 and 56
1 probable transmembrane helix predicted for TA16880 by TMHMM2.0 at aa 31-53
SMART 4 transmembrane domains at aa 33-55, 75-97, 17-139, 274-296; 4 probable transmembrane helices predicted for TA16860 by TMHMM2.0 at aa 33-55, 75-97, 117-139 and 274-296; Signal anchor predicted for TA16860 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 1.000) with cleavage site probability 0.000 between residues 53 and 54
Signal anchor predicted for TA16860 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 1.000) with cleavage site probability 0.000 between residues 53 and 54
4 probable transmembrane helices predicted for TA16860 by TMHMM2.0 at aa 33-55, 75-97, 117-139 and 274-296
Tap821d03.p1c.C.cand.73 - score = 16.70; SMART 1 transmembrane domain at aa 284-306; 2 pfam:MtN3_slv (PF03083) domains at aa 158-253, E()=1.80e-05; 326-413, E()=1.50e-05; 7 probable transmembrane helices predicted for TA16830 by TMHMM2.0 at aa 158-180, 201-223, 238-272, 284-306, 311-333, 364-382 and 386-408; Signal peptide predicted for TA16830 by SignalP 2.0 HMM (Signal peptide probability 0.960, signal anchor probability 0.000) with cleavage site probability 0.901 between residues 16 and 17
Signal peptide predicted for TA16830 by SignalP 2.0 HMM (Signal peptide probability 0.960, signal anchor probability 0.000) with cleavage site probability 0.901 between residues 16 and 17
Tap821d03.p1c.cand.23 - score = 32.11; Signal peptide predicted for TA16820 by SignalP 2.0 HMM (Signal peptide probability 0.989, signal anchor probability 0.002) with cleavage site probability 0.811 between residues 17 and 18
Signal peptide predicted for TA16820 by SignalP 2.0 HMM (Signal peptide probability 0.989, signal anchor probability 0.002) with cleavage site probability 0.811 between residues 17 and 18
(RNA) pseudouridylate synthase, putative
Tap821d03.p1c.C.cand.75 - score = 62.54; SMART 1 transmembrane domain at aa 112-134; CPDc (SM00577) at aa 183-309, E()=1.05e-21; 1 probable transmembrane helix predicted for TA16800 by TMHMM2.0 at aa 112-134
1 probable transmembrane helix predicted for TA16800 by TMHMM2.0 at aa 112-134
Tap821d03.p1c.C.cand.76 - score = 78.15; SMART pfam:tRNA-synt_2c (PF01411) at aa 81-821, E()=1.90e-293; Apicoplast targetting peptide predicted by the PlasmoAP tool; 1 probable transmembrane helix predicted for TA16780 by TMHMM2.0 at aa 2-24; Signal peptide predicted for TA16780 by SignalP 2.0 HMM (Signal peptide probability 0.620, signal anchor probability 0.295) with cleavage site probability 0.492 between residues 22 and 23
Signal peptide predicted for TA16780 by SignalP 2.0 HMM (Signal peptide probability 0.620, signal anchor probability 0.295) with cleavage site probability 0.492 between residues 22 and 23
1 probable transmembrane helix predicted for TA16780 by TMHMM2.0 at aa 2-24
Tap821d03.p1c.C.cand.77 - score = 65.55; or 7, fibronectin/fibrinogen-binding protein, putative; but no relevant pfam hit
Tap821d03.p1c.cand.16 - score = 36.05; Signal peptide predicted for TA16750 by SignalP 2.0 HMM (Signal peptide probability 0.739, signal anchor probability 0.018) with cleavage site probability 0.560 between residues 23 and 24
Signal peptide predicted for TA16750 by SignalP 2.0 HMM (Signal peptide probability 0.739, signal anchor probability 0.018) with cleavage site probability 0.560 between residues 23 and 24
Tap821d03.p1c.C.cand.82 - score = 29.23; SMART 11 transmembrane domains at aa 12-31, 41-61, 68-90, 94-113, 126-148, 158-180, 237-259, 279-301, 308-325, 340-362 and 764-786; 11 probable transmembrane helices predicted for TA16735 by TMHMM2.0 at aa 12-31, 41-61, 68-90, 94-113, 126-148, 158-180, 237-259, 279-301, 308-325, 340-362 and 764-786; Signal anchor predicted for TA16735 by SignalP 2.0 HMM (Signal peptide probability 0.004, signal anchor probability 0.936) with cleavage site probability 0.001 between residues 37 and 38
Signal anchor predicted for TA16735 by SignalP 2.0 HMM (Signal peptide probability 0.004, signal anchor probability 0.936) with cleavage site probability 0.001 between residues 37 and 38
phosphoribosyl pyrophosphate synthetase, putative
U6 snRNA-associated Sm-lke protein, putative
Tap821d03.p1c.cand.13 - score = 18.17; SMART 1 transmembrane domain, at aa 217-239; 1 probable transmembrane helix predicted for TA16720 by TMHMM2.0 at aa 217-239
1 probable transmembrane helix predicted for TA16720 by TMHMM2.0 at aa 217-239
polymorphic antigen precursor-like protein, putative
Tap821d03.p1c.cand.11 - score = 75.80; Signal peptide predicted for TA16685 by SignalP 2.0 HMM (Signal peptide probability 0.999, signal anchor probability 0.000) with cleavage site probability 0.755 between residues 21 and 22; GPI-Anchor Signal predicted for TA16685 by DGPI v2.04, no cleavage site predicted
Signal peptide predicted for TA16685 by SignalP 2.0 HMM (Signal peptide probability 0.999, signal anchor probability 0.000) with cleavage site probability 0.755 between residues 21 and 22
Tap821d03.p1c.cand.9 - score = 31.64; SMART 1 transmembrane domain at 417-434; ZnF_NFX (SM00438) at aa 104-115, E()=0.00e+00; TSP1 (SM00209) at aa 200-245, E()=1.82e-07; 1 probable transmembrane helix predicted for TA16575 by TMHMM2.0 at aa 417-434
1 probable transmembrane helix predicted for TA16575 by TMHMM2.0 at aa 417-434
calmodulin-domain protein kinase, putative
SMART pfam:Ribosomal_S26e (PF01283) at aa 1-114, E()=4.40e-48
SMART 1 transmembrane domain at aa 233-255; 1 probable transmembrane helix predicted for TA16245 by TMHMM2.0 at aa 233-255
1 probable transmembrane helix predicted for TA16245 by TMHMM2.0 at aa 233-255
DNA-directed RNA polymerase (mitochondrial precursor), putative
Tap821d03.p1c.C.cand.89 - score = 20.47; SMART 1 transmembrane domain at aa 309-328; 1 probable transmembrane helix predicted for TA16125 by TMHMM2.0 at aa 309-328; Signal peptide predicted for TA16125 by SignalP 2.0 HMM (Signal peptide probability 0.688, signal anchor probability 0.010) with cleavage site probability 0.371 between residues 23 and 24
Signal peptide predicted for TA16125 by SignalP 2.0 HMM (Signal peptide probability 0.688, signal anchor probability 0.010) with cleavage site probability 0.371 between residues 23 and 24
1 probable transmembrane helix predicted for TA16125 by TMHMM2.0 at aa 309-328
mitochondrial membrane protease, subunit 2, putative
SMART pfam:Peptidase_S26 (PF00461) at aa 1-136, E()=1.60e-03
SMART 1 transmembrane domain at aa 20-39; pfam:DUF174 (PF02617) at aa 59-144, E()=6.00e-05; 1 probable transmembrane helix predicted for TA16110 by TMHMM2.0 at aa 20-39
1 probable transmembrane helix predicted for TA16110 by TMHMM2.0 at aa 20-39
7,8 dihydro-8-oxoguanine DNA glycosylase, putative
SMART ENDO3c (SM00478) at aa 122-295, E()=2.55e-11; GPI-Anchor Signal predicted for TA16100 by DGPI v2.04 with cleavage site probability 0.5814 near 282
GPI-Anchor Signal predicted for TA16100 by DGPI v2.04 with cleavage site probability 0.5814 near 282
Tap821d03.p1c.cand.3 - score = 50.64; SMART pfam:Collagen (PF01391) at aa 345-403, E()=6.20e-02; 1 probable transmembrane helix predicted for TA16095 by TMHMM2.0 at aa 7-26
1 probable transmembrane helix predicted for TA16095 by TMHMM2.0 at aa 7-26
Tap349e08.q2ks7.cand.135 - score = 33.79; 3 probable transmembrane helices predicted for TA06630 by TMHMM2.0 at aa 113-135, 148-170 and 180-202
3 probable transmembrane helices predicted for TA06630 by TMHMM2.0 at aa 113-135, 148-170 and 180-202
ATP binding protein (maybe ABC transporter), putative
Tap349e08.q2ks7.C.cand.2 - score = 31.23; Apicoplast targetting peptide predicted by the PlasmoAP tool; 1 probable transmembrane helix predicted for TA06620 by TMHMM2.0 at aa 5-27; Signal peptide predicted for TA06620 by SignalP 2.0 HMM (Signal peptide probability 0.992, signal anchor probability 0.001) with cleavage site probability 0.936 between residues 16 and 17
Signal peptide predicted for TA06620 by SignalP 2.0 HMM (Signal peptide probability 0.992, signal anchor probability 0.001) with cleavage site probability 0.936 between residues 16 and 17
1 probable transmembrane helix predicted for TA06620 by TMHMM2.0 at aa 5-27
Tap349e08.q2ks7.cand.134 - score = 34.31; 2 probable transmembrane helices predicted for TA06600 by TMHMM2.0 at aa 92-114 and 124-143
2 probable transmembrane helices predicted for TA06600 by TMHMM2.0 at aa 92-114 and 124-143
Tap349e08.q2ks7.cand.133 - score = 26.45; Signal peptide predicted for TA06595 by SignalP 2.0 HMM (Signal peptide probability 0.937, signal anchor probability 0.000) with cleavage site probability 0.841 between residues 16 and 17
Signal peptide predicted for TA06595 by SignalP 2.0 HMM (Signal peptide probability 0.937, signal anchor probability 0.000) with cleavage site probability 0.841 between residues 16 and 17
mitochondrial import inner membrane translocase Tim17 subunit, putative
4 probable transmembrane helices predicted for TA06575 by TMHMM2.0 at aa 20-37, 61-83, 90-107 and 117-139
mitochondrial inner membrane subunit, putative
Tap349e08.q2ks7.C.cand.6 - score = 14.52; Signal peptide predicted for TA06560 by SignalP 2.0 HMM (Signal peptide probability 0.716, signal anchor probability 0.000) with cleavage site probability 0.404 between residues 18 and 19
Signal peptide predicted for TA06560 by SignalP 2.0 HMM (Signal peptide probability 0.716, signal anchor probability 0.000) with cleavage site probability 0.404 between residues 18 and 19
ribosome biogenesis regulatory protein, putative
polyadenylate (poly(A)) binding protein, putative
Tap349e08.q2ks7.cand.127 - score = 30.60; 1 probable transmembrane helix predicted for TA06510 by TMHMM2.0 at aa 288-310; Signal peptide predicted for TA06510 by SignalP 2.0 HMM (Signal peptide probability 0.990, signal anchor probability 0.000) with cleavage site probability 0.701 between residues 19 and 20; GPI-Anchor Signal predicted for TA06510 by DGPI v2.04 with cleavage site probability 0.348 near 286
1 probable transmembrane helix predicted for TA06510 by TMHMM2.0 at aa 288-310
GPI-Anchor Signal predicted for TA06510 by DGPI v2.04 with cleavage site probability 0.348 near 286
Signal peptide predicted for TA06510 by SignalP 2.0 HMM (Signal peptide probability 0.990, signal anchor probability 0.000) with cleavage site probability 0.701 between residues 19 and 20
transitional endoplasmic reticulum ATPase (CDC48)
SWI/SNF family trascriptional activator protein, putative
Tap349e08.q2ks7.C.cand.13 - score = 106.32; Signal peptide predicted for TA06470 by SignalP 2.0 HMM (Signal peptide probability 0.926, signal anchor probability 0.000) with cleavage site probability 0.761 between residues 20 and 21
Signal peptide predicted for TA06470 by SignalP 2.0 HMM (Signal peptide probability 0.926, signal anchor probability 0.000) with cleavage site probability 0.761 between residues 20 and 21
1 probable transmembrane helix predicted for TA06430 by TMHMM2.0 at aa 574-592
DEAD-box family (RNA) helicase, putative
Tap349e08.q2ks7.cand.114 - score = 24.35; Signal peptide predicted for TA06380 by SignalP 2.0 HMM (Signal peptide probability 0.996, signal anchor probability 0.002) with cleavage site probability 0.433 between residues 23 and 24
Signal peptide predicted for TA06380 by SignalP 2.0 HMM (Signal peptide probability 0.996, signal anchor probability 0.002) with cleavage site probability 0.433 between residues 23 and 24
Tap349e08.q2ks7.cand.113 - score = 63.43; 1 probable transmembrane helix predicted for TA06375 by TMHMM2.0 at aa 4-26; Signal peptide predicted for TA06375 by SignalP 2.0 HMM (Signal peptide probability 0.972, signal anchor probability 0.019) with cleavage site probability 0.830 between residues 22 and 23; GPI-Anchor Signal predicted for TA06375 by DGPI v2.04, no cleavage site predicted
1 probable transmembrane helix predicted for TA06375 by TMHMM2.0 at aa 4-26
Signal peptide predicted for TA06375 by SignalP 2.0 HMM (Signal peptide probability 0.972, signal anchor probability 0.019) with cleavage site probability 0.830 between residues 22 and 23
Tap349e08.q2ks7.cand.112 - score = 22.78; 11 probable transmembrane helices predicted for TA06360 by TMHMM2.0 at aa 20-39, 112-134, 144-166, 171-193, 208-230, 344-366, 376-393, 420-442, 462-484, 491-513 and 528-550; Signal anchor predicted for TA06360 by SignalP 2.0 HMM (Signal peptide probability 0.010, signal anchor probability 0.618) with cleavage site probability 0.002 between residues 41 and 42
Signal anchor predicted for TA06360 by SignalP 2.0 HMM (Signal peptide probability 0.010, signal anchor probability 0.618) with cleavage site probability 0.002 between residues 41 and 42
Tap349e08.q2ks7.cand.112 - score = 22.78; Signal peptide predicted for TA06355 by SignalP 2.0 HMM (Signal peptide probability 0.979, signal anchor probability 0.000) with cleavage site probability 0.797 between residues 20 and 21
Signal peptide predicted for TA06355 by SignalP 2.0 HMM (Signal peptide probability 0.979, signal anchor probability 0.000) with cleavage site probability 0.797 between residues 20 and 21
Signal peptide predicted for TA06320 by SignalP 2.0 HMM (Signal peptide probability 0.891, signal anchor probability 0.002) with cleavage site probability 0.546 between residues 24 and 25
Tap349e08.q2ks7.cand.110 - score = 43.55; 1 probable transmembrane helix predicted for TA06315 by TMHMM2.0 at aa 52-74
1 probable transmembrane helix predicted for TA06315 by TMHMM2.0 at aa 52-74
DNA polymerase delta catalytic subunit (Pold1)
Signal peptide predicted for TA06280 by SignalP 2.0 HMM (Signal peptide probability 0.983, signal anchor probability 0.000) with cleavage site probability 0.784 between residues 20 and 21
1 probable transmembrane helix predicted for TA06240 by TMHMM2.0 at aa 47-66; Signal anchor predicted for TA06240 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 0.898) with cleavage site probability 0.000 between residues -1 and 0
1 probable transmembrane helix predicted for TA06240 by TMHMM2.0 at aa 47-66
Tap349e08.q2ks7.cand.100 - score = 9.64; 3 probable transmembrane helices predicted for TA06220 by TMHMM2.0 at aa 7-26, 31-53 and 116-138; Signal peptide predicted for TA06220 by SignalP 2.0 HMM (Signal peptide probability 0.655, signal anchor probability 0.233) with cleavage site probability 0.142 between residues 20 and 21
3 probable transmembrane helices predicted for TA06220 by TMHMM2.0 at aa 7-26, 31-53 and 116-138
Signal peptide predicted for TA06220 by SignalP 2.0 HMM (Signal peptide probability 0.655, signal anchor probability 0.233) with cleavage site probability 0.142 between residues 20 and 21
eukaryotic translation initiation factor (eIF5A)
Tap349e08.q2ks7.cand.96 - score = 29.40; 1 probable transmembrane helix predicted for TA06195 by TMHMM2.0 at aa 38-60; GPI-Anchor Signal predicted for TA06195 by DGPI v2.04 with cleavage site probability 0.3306 near 140
GPI-Anchor Signal predicted for TA06195 by DGPI v2.04 with cleavage site probability 0.3306 near 140
1 probable transmembrane helix predicted for TA06195 by TMHMM2.0 at aa 38-60
casein kinase II, beta subunit, putative
Tap349e08.q2ks7.C.cand.38 - score = 46.79; GPI-Anchor Signal predicted for TA06150 by DGPI v2.04 with cleavage site probability 0.172 near 270
GPI-Anchor Signal predicted for TA06150 by DGPI v2.04 with cleavage site probability 0.172 near 270
Signal peptide predicted for TA06115 by SignalP 2.0 HMM (Signal peptide probability 0.978, signal anchor probability 0.004) with cleavage site probability 0.885 between residues 24 and 25
SNF2-family protein (chromodomain-helicase-DNA-binding protein 1)
protein disulfide isomerase (thioredoxin), putative
Signal peptide predicted for TA06075 by SignalP 2.0 HMM (Signal peptide probability 0.998, signal anchor probability 0.000) with cleavage site probability 0.607 between residues 20 and 21
Tap349e08.q2ks7.cand.88 - score = 37.95; Signal peptide predicted for TA06065 by SignalP 2.0 HMM (Signal peptide probability 0.745, signal anchor probability 0.012) with cleavage site probability 0.582 between residues 24 and 25
Signal peptide predicted for TA06065 by SignalP 2.0 HMM (Signal peptide probability 0.745, signal anchor probability 0.012) with cleavage site probability 0.582 between residues 24 and 25
ubiquinol-cytochrome C reductase complex, 14 kDa subunit
Tap349e08.q2ks7.cand.86 - score = 22.39; 1 probable transmembrane helix predicted for TA06050 by TMHMM2.0 at aa 26-48; Signal anchor predicted for TA06050 by SignalP 2.0 HMM (Signal peptide probability 0.001, signal anchor probability 0.856) with cleavage site probability 0.001 between residues 40 and 41
1 probable transmembrane helix predicted for TA06050 by TMHMM2.0 at aa 26-48
Signal anchor predicted for TA06050 by SignalP 2.0 HMM (Signal peptide probability 0.001, signal anchor probability 0.856) with cleavage site probability 0.001 between residues 40 and 41
Tap349e08.q2ks7.C.cand.44 - score = 20.15; transcription factor, putative
2 probable transmembrane helices predicted for TA06030 by TMHMM2.0 at aa 7-29 and 33-52; Signal peptide predicted for TA06030 by SignalP 2.0 HMM (Signal peptide probability 0.667, signal anchor probability 0.278) with cleavage site probability 0.334 between residues 24 and 25
Signal peptide predicted for TA06030 by SignalP 2.0 HMM (Signal peptide probability 0.667, signal anchor probability 0.278) with cleavage site probability 0.334 between residues 24 and 25
2 probable transmembrane helices predicted for TA06030 by TMHMM2.0 at aa 7-29 and 33-52
2 probable transmembrane helices predicted for TA06020 by TMHMM2.0 at aa 109-131 and 169-191
eukaryotic translation initiation factor 2 alpha subunit, putative
signal recognition particle 54kDa protein 2, putative
Tap349e08.q2ks7.cand.82 - score = 36.75; Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal peptide predicted for TA05985 by SignalP 2.0 HMM (Signal peptide probability 0.918, signal anchor probability 0.000) with cleavage site probability 0.588 between residues 21 and 22
Signal peptide predicted for TA05985 by SignalP 2.0 HMM (Signal peptide probability 0.918, signal anchor probability 0.000) with cleavage site probability 0.588 between residues 21 and 22
Tap349e08.q2ks7.cand.80 - score = 27.22; 11 probable transmembrane helices predicted for TA05965 by TMHMM2.0 at aa 19-41, 222-244, 251-273, 283-305, 317-339, 373-395, 408-430, 462-484, 504-526, 536-558 and 579-601; Signal anchor predicted for TA05965 by SignalP 2.0 HMM (Signal peptide probability 0.161, signal anchor probability 0.704) with cleavage site probability 0.058 between residues 31 and 32
Signal anchor predicted for TA05965 by SignalP 2.0 HMM (Signal peptide probability 0.161, signal anchor probability 0.704) with cleavage site probability 0.058 between residues 31 and 32
Tap349e08.q2ks7.cand.78 - score = 24.24; 1 probable transmembrane helix predicted for TA05955 by TMHMM2.0 at aa 199-221
1 probable transmembrane helix predicted for TA05955 by TMHMM2.0 at aa 199-221
Tap349e08.q2ks7.C.cand.56 - score = 85.88; 2 probable transmembrane helices predicted for TA05930 by TMHMM2.0 at aa 599-621 and 634-656
2 probable transmembrane helices predicted for TA05930 by TMHMM2.0 at aa 599-621 and 634-656
nonsense-mediated mRNA decay protein (NMD3)
Tap349e08.q2ks7.cand.68 - score = 143.15; Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal peptide predicted for TA05860 by SignalP 2.0 HMM (Signal peptide probability 0.923, signal anchor probability 0.069) with cleavage site probability 0.589 between residues 20 and 21
Signal peptide predicted for TA05860 by SignalP 2.0 HMM (Signal peptide probability 0.923, signal anchor probability 0.069) with cleavage site probability 0.589 between residues 20 and 21
Tap349e08.q2ks7.cand.68 - score = 143.15; 1 probable transmembrane helix predicted for TA05855 by TMHMM2.0 at aa 210-232
1 probable transmembrane helix predicted for TA05855 by TMHMM2.0 at aa 210-232
asparaginyl-tRNA synthetase (chloroplast/mitochondrial precursor), putative
Tap349e08.q2ks7.cand.65 - score = 53.35; Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal peptide predicted for TA05825 by SignalP 2.0 HMM (Signal peptide probability 0.802, signal anchor probability 0.002) with cleavage site probability 0.480 between residues 26 and 27
Signal peptide predicted for TA05825 by SignalP 2.0 HMM (Signal peptide probability 0.802, signal anchor probability 0.002) with cleavage site probability 0.480 between residues 26 and 27
Tap349e08.q2ks7.cand.64 - score = 15.14; 9 probable transmembrane helices predicted for TA05820 by TMHMM2.0 at aa 13-35, 45-67, 100-122, 132-151, 206-223, 228-247, 289-311, 361-383 and 390-409; Signal anchor predicted for TA05820 by SignalP 2.0 HMM (Signal peptide probability 0.016, signal anchor probability 0.976) with cleavage site probability 0.008 between residues 23 and 24
Signal anchor predicted for TA05820 by SignalP 2.0 HMM (Signal peptide probability 0.016, signal anchor probability 0.976) with cleavage site probability 0.008 between residues 23 and 24
cyclophilin peptidyl-prolyl cis-trans isomerase protein, putative
ADP-ribosylation factor GTPase-activating protein, putative
Tap349e08.q2ks7.cand.61 - score = 24.15; 11 probable transmembrane helices predicted for TA05775 by TMHMM2.0 at aa 20-42, 153-175, 185-207, 214-236, 251-273, 411-433, 448-467, 523-545, 565-587, 594-613 and 633-652; Signal anchor predicted for TA05775 by SignalP 2.0 HMM (Signal peptide probability 0.040, signal anchor probability 0.680) with cleavage site probability 0.015 between residues 32 and 33
Signal anchor predicted for TA05775 by SignalP 2.0 HMM (Signal peptide probability 0.040, signal anchor probability 0.680) with cleavage site probability 0.015 between residues 32 and 33
ubiquitination-mediated degradation component, putative
(U6) snRNA-associated Sm-like protein, putative
Tap349e08.q2ks7.C.cand.69 - score = 10.97; Signal peptide predicted for TA05750 by SignalP 2.0 HMM (Signal peptide probability 0.605, signal anchor probability 0.000) with cleavage site probability 0.591 between residues 21 and 22
Signal peptide predicted for TA05750 by SignalP 2.0 HMM (Signal peptide probability 0.605, signal anchor probability 0.000) with cleavage site probability 0.591 between residues 21 and 22
Tap349e08.q2ks7.cand.55 - score = 36.33; Signal peptide predicted for TA05735 by SignalP 2.0 HMM (Signal peptide probability 0.799, signal anchor probability 0.000) with cleavage site probability 0.444 between residues 20 and 21
Signal peptide predicted for TA05735 by SignalP 2.0 HMM (Signal peptide probability 0.799, signal anchor probability 0.000) with cleavage site probability 0.444 between residues 20 and 21
mitochondrial import inner membrane translocase subunit (TIM9)
Tap349e08.q2ks7.cand.54 - score = 17.27; 6 probable transmembrane helices predicted for TA05715 by TMHMM2.0 at aa 21-43, 63-85, 128-150, 160-182, 189-206 and 250-272
6 probable transmembrane helices predicted for TA05715 by TMHMM2.0 at aa 21-43, 63-85, 128-150, 160-182, 189-206 and 250-272
pre-mRNA splicing factor (U5 snRNP-associated), putative
3 probable transmembrane helices predicted for TA05700 by TMHMM2.0 at aa 368-390, 545-567 and 572-591
Tap349e08.q2ks7.cand.51 - score = 37.99; 4 probable transmembrane helices predicted for TA05690 by TMHMM2.0 at aa 26-48, 61-83, 98-116 and 168-190
4 probable transmembrane helices predicted for TA05690 by TMHMM2.0 at aa 26-48, 61-83, 98-116 and 168-190
Tap349e08.q2ks7.cand.48 - score = 23.90; 4 probable transmembrane helices predicted for TA05660 by TMHMM2.0 at aa 310-332, 337-359, 366-388 and 398-420
4 probable transmembrane helices predicted for TA05660 by TMHMM2.0 at aa 310-332, 337-359, 366-388 and 398-420
1-phosphatidylinositol-4,5-bisphosphatephosphod ie sterase
chromatin assembly factor subunit, putative
Tap349e08.q2ks7.cand.38 - score = 9.65; 2 probable transmembrane helices predicted for TA06945 by TMHMM2.0 at aa 15-37 and 58-77; Signal anchor predicted for TA06945 by SignalP 2.0 HMM (Signal peptide probability 0.007, signal anchor probability 0.925) with cleavage site probability 0.004 between residues 33 and 34
2 probable transmembrane helices predicted for TA06945 by TMHMM2.0 at aa 15-37 and 58-77
Signal anchor predicted for TA06945 by SignalP 2.0 HMM (Signal peptide probability 0.007, signal anchor probability 0.925) with cleavage site probability 0.004 between residues 33 and 34
Tap349e08.q2ks7.C.cand.82 - score = 41.60; GPI-Anchor Signal predicted for TA06940 by DGPI v2.04 with cleavage site probability 0.10399999 near 736
GPI-Anchor Signal predicted for TA06940 by DGPI v2.04 with cleavage site probability 0.10399999 near 736
eukaryotic translation initiation factor, putative
6 probable transmembrane helices predicted for TA06890 by TMHMM2.0 at aa 80-102, 112-134, 154-176, 196-218, 231-250 and 254-276
Tap349e08.q2ks7.cand.31 - score = 77.81; 9 probable transmembrane helices predicted for TA06875 by TMHMM2.0 at aa 387-409, 413-435, 512-534, 549-571, 813-830, 845-867, 888-910, 925-944 and 1066-1088; Signal peptide predicted for TA06875 by SignalP 2.0 HMM (Signal peptide probability 0.892, signal anchor probability 0.103) with cleavage site probability 0.851 between residues 30 and 31
Signal peptide predicted for TA06875 by SignalP 2.0 HMM (Signal peptide probability 0.892, signal anchor probability 0.103) with cleavage site probability 0.851 between residues 30 and 31
small GTP-binding protein (RAN subfamily), putative
Tap349e08.q2ks7.cand.26 - score = 26.03; Signal peptide predicted for TA06810 by SignalP 2.0 HMM (Signal peptide probability 0.903, signal anchor probability 0.055) with cleavage site probability 0.860 between residues 21 and 22
Signal peptide predicted for TA06810 by SignalP 2.0 HMM (Signal peptide probability 0.903, signal anchor probability 0.055) with cleavage site probability 0.860 between residues 21 and 22
Tap349e08.q2ks7.cand.23 - score = 71.78; Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal peptide predicted for TA06775 by SignalP 2.0 HMM (Signal peptide probability 0.967, signal anchor probability 0.002) with cleavage site probability 0.848 between residues 19 and 20
Signal peptide predicted for TA06775 by SignalP 2.0 HMM (Signal peptide probability 0.967, signal anchor probability 0.002) with cleavage site probability 0.848 between residues 19 and 20
mitochondrial inner membrane protein, putative
Tap349e08.q2ks7.cand.18 - score = 37.58; 11 probable transmembrane helices predicted for TA06740 by TMHMM2.0 at aa 5-27, 47-69, 89-111, 123-145, 150-172, 185-207, 313-335, 348-366, 403-425, 446-468 and 478-500; Signal peptide predicted for TA06740 by SignalP 2.0 HMM (Signal peptide probability 0.770, signal anchor probability 0.004) with cleavage site probability 0.525 between residues 20 and 21
Signal peptide predicted for TA06740 by SignalP 2.0 HMM (Signal peptide probability 0.770, signal anchor probability 0.004) with cleavage site probability 0.525 between residues 20 and 21
Tap349e08.q2ks7.cand.16 - score = 39.04; 1 probable transmembrane helix predicted for TA06725 by TMHMM2.0 at aa 7-29
1 probable transmembrane helix predicted for TA06725 by TMHMM2.0 at aa 7-29
ribonucleotide reductase R2 subunit or ribonucleoside-diphosphate reductase small chain, putative
Tap349e08.q2ks7.C.cand.104 - score = 80.26; 1 probable transmembrane helix predicted for TA06715 by TMHMM2.0 at aa 184-206
1 probable transmembrane helix predicted for TA06715 by TMHMM2.0 at aa 184-206
Tap349e08.q2ks7.C.cand.109 - score = 26.48; Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal peptide predicted for TA06680 by SignalP 2.0 HMM (Signal peptide probability 0.682, signal anchor probability 0.023) with cleavage site probability 0.551 between residues 20 and 21
Signal peptide predicted for TA06680 by SignalP 2.0 HMM (Signal peptide probability 0.682, signal anchor probability 0.023) with cleavage site probability 0.551 between residues 20 and 21
Tap349e08.q2ks7.cand.13 - score = 15.80; 1 probable transmembrane helix predicted for TA06675 by TMHMM2.0 at aa 5-27; Signal peptide predicted for TA06675 by SignalP 2.0 HMM (Signal peptide probability 0.965, signal anchor probability 0.005) with cleavage site probability 0.751 between residues 21 and 22
1 probable transmembrane helix predicted for TA06675 by TMHMM2.0 at aa 5-27
Signal peptide predicted for TA06675 by SignalP 2.0 HMM (Signal peptide probability 0.965, signal anchor probability 0.005) with cleavage site probability 0.751 between residues 21 and 22
Tap349e08.q2ks7.cand.12 - score = 61.65; 4 probable transmembrane helices predicted for TA06475 by TMHMM2.0 at aa 35-57, 129-151, 178-200 and 227-249; GPI-Anchor Signal predicted for TA06475 by DGPI v2.04 with cleavage site probability 0.3306 near 305
GPI-Anchor Signal predicted for TA06475 by DGPI v2.04 with cleavage site probability 0.3306 near 305
4 probable transmembrane helices predicted for TA06475 by TMHMM2.0 at aa 35-57, 129-151, 178-200 and 227-249
2 probable transmembrane helices predicted for TA06420 by TMHMM2.0 at aa 10-32 and 53-75; Signal peptide predicted for TA06420 by SignalP 2.0 HMM (Signal peptide probability 0.732, signal anchor probability 0.124) with cleavage site probability 0.204 between residues 28 and 29
2 probable transmembrane helices predicted for TA06420 by TMHMM2.0 at aa 10-32 and 53-75
Signal peptide predicted for TA06420 by SignalP 2.0 HMM (Signal peptide probability 0.732, signal anchor probability 0.124) with cleavage site probability 0.204 between residues 28 and 29
clathrin-adaptor (medium) chain, putative
26S proteasome regulatory subunit, putative
Tap349e08.q2ks7.cand.6 - score = 49.03; Signal peptide predicted for TA05870 by SignalP 2.0 HMM (Signal peptide probability 0.938, signal anchor probability 0.000) with cleavage site probability 0.522 between residues 22 and 23
Signal peptide predicted for TA05870 by SignalP 2.0 HMM (Signal peptide probability 0.938, signal anchor probability 0.000) with cleavage site probability 0.522 between residues 22 and 23
Tap349e08.q2ks7.cand.5 - score = 30.59; Signal peptide predicted for TA05815 by SignalP 2.0 HMM (Signal peptide probability 0.824, signal anchor probability 0.084) with cleavage site probability 0.391 between residues 26 and 27
Signal peptide predicted for TA05815 by SignalP 2.0 HMM (Signal peptide probability 0.824, signal anchor probability 0.084) with cleavage site probability 0.391 between residues 26 and 27
Tap349e08.q2ks7.cand.4 - score = 46.24; Signal peptide predicted for TA05760 by SignalP 2.0 HMM (Signal peptide probability 0.961, signal anchor probability 0.001) with cleavage site probability 0.878 between residues 22 and 23
Signal peptide predicted for TA05760 by SignalP 2.0 HMM (Signal peptide probability 0.961, signal anchor probability 0.001) with cleavage site probability 0.878 between residues 22 and 23
Tap349e08.q2ks7.cand.3 - score = 53.66; Signal peptide predicted for TA05705 by SignalP 2.0 HMM (Signal peptide probability 0.996, signal anchor probability 0.000) with cleavage site probability 0.500 between residues 21 and 22
Signal peptide predicted for TA05705 by SignalP 2.0 HMM (Signal peptide probability 0.996, signal anchor probability 0.000) with cleavage site probability 0.500 between residues 21 and 22
2 probable transmembrane helices predicted for TA05640 by TMHMM2.0 at aa 62-84 and 94-108
Tap349e08.q2ks7.C.cand.122 - score = 7.18; 2 probable transmembrane helices predicted for TA05635 by TMHMM2.0 at aa 114-136 and 140-162
2 probable transmembrane helices predicted for TA05635 by TMHMM2.0 at aa 114-136 and 140-162
phosphotyrosyl phosphatase activator (PPTA) protein, putative
Tap349e08.q2ks7.C.cand.127 - score = 14.65; Signal peptide predicted for TA05615 by SignalP 2.0 HMM (Signal peptide probability 1.000, signal anchor probability 0.000) with cleavage site probability 0.966 between residues 17 and 18
Signal peptide predicted for TA05615 by SignalP 2.0 HMM (Signal peptide probability 1.000, signal anchor probability 0.000) with cleavage site probability 0.966 between residues 17 and 18
SMART 2 transmembrane domains at aa 443-465 and 472-494; 2 probable transmembrane helices predicted for TA02755 by TMHMM2.0 at aa 443-465 and 472-494
2 probable transmembrane helices predicted for TA02755 by TMHMM2.0 at aa 443-465 and 472-494
could have another exon in between the exonVI & exon VII; SMART pfam:Adaptin_N (PF01602) at aa 1-471, E()=4.00e-02
Tap152h01.q1c.C.cand.43 - score = 8.99; Signal peptide predicted for TA02770 by SignalP 2.0 HMM (Signal peptide probability 0.640, signal anchor probability 0.007) with cleavage site probability 0.426 between residues 21 and 22
Signal peptide predicted for TA02770 by SignalP 2.0 HMM (Signal peptide probability 0.640, signal anchor probability 0.007) with cleavage site probability 0.426 between residues 21 and 22
Tap152h01.q1c.cand.2 - score = 25.87; Signal peptide predicted for TA02785 by SignalP 2.0 HMM (Signal peptide probability 0.897, signal anchor probability 0.000) with cleavage site probability 0.658 between residues 15 and 16
Signal peptide predicted for TA02785 by SignalP 2.0 HMM (Signal peptide probability 0.897, signal anchor probability 0.000) with cleavage site probability 0.658 between residues 15 and 16
Tap152h01.q1c.C.cand.40 - score = 21.32; SMART 1 transmembrane domain at aa 519-538; 1 probable transmembrane helix predicted for TA02805 by TMHMM2.0 at aa 519-538
1 probable transmembrane helix predicted for TA02805 by TMHMM2.0 at aa 519-538
Tap152h01.q1c.C.cand.36 - score = 26.00; SMART 1 transmembrane domain at aa 270-292; 1 probable transmembrane helix predicted for TA02870 by TMHMM2.0 at aa 270-292
1 probable transmembrane helix predicted for TA02870 by TMHMM2.0 at aa 270-292
minichromosome maintenance (MCM), putative
SMART 2 transmembrane domains at aa 1178-1200 and 1207-1229; 2 probable transmembrane helices predicted for TA02900 by TMHMM2.0 at aa 1178-1200 and 1207-1229
2 probable transmembrane helices predicted for TA02900 by TMHMM2.0 at aa 1178-1200 and 1207-1229
Tap152h01.q1c.C.cand.26 - score = 71.74; SMART 5 transmembrane domains at aa 45-67, 106-128, 149-171, 181-203 and 224-246; RING (SM00184) at aa 304-342, E()=2.17e-05; ZnF_NFX (SM00438) at aa 320-344, E()=0.00e+00; 6 probable transmembrane helices predicted for TA02935 by TMHMM2.0 at aa 10-32, 45-67, 106-128, 149-171, 181-203 and 224-246; Signal peptide predicted for TA02935 by SignalP 2.0 HMM (Signal peptide probability 0.665, signal anchor probability 0.064) with cleavage site probability 0.196 between residues 22 and 23
6 probable transmembrane helices predicted for TA02935 by TMHMM2.0 at aa 10-32, 45-67, 106-128, 149-171, 181-203 and 224-246
Signal peptide predicted for TA02935 by SignalP 2.0 HMM (Signal peptide probability 0.665, signal anchor probability 0.064) with cleavage site probability 0.196 between residues 22 and 23
Tap152h01.q1c.cand.15 - score = 41.42; SMART 1 transmembrane domain at aa 572-589; 1 probable transmembrane helix predicted for TA02945 by TMHMM2.0 at aa 572-589
1 probable transmembrane helix predicted for TA02945 by TMHMM2.0 at aa 572-589
Theileria parva Tpr-like protein, distantly related, mixture; SMART 3 transmembrane domains at aa 36-58, 78-100 and 112-134; 1 probable transmembrane helix predicted for TA02960 by TMHMM2.0 at aa 28-50; Signal anchor predicted for TA02960 by SignalP 2.0 HMM (Signal peptide probability 0.001, signal anchor probability 0.995) with cleavage site probability 0.001 between residues 45 and 46
Signal anchor predicted for TA02960 by SignalP 2.0 HMM (Signal peptide probability 0.001, signal anchor probability 0.995) with cleavage site probability 0.001 between residues 45 and 46
1 probable transmembrane helix predicted for TA02960 by TMHMM2.0 at aa 28-50
DNA-directed RNA polymerase III (-specific) subunit (RPC34)
Tap152h01.q1c.C.cand.25 - score = 83.65; SMART pfam:RNA_pol_Rpc34 (PF05150) at aa 7-297, E()=2.30e-08; 4 transmembrane domains at aa 298-317, 322-344, 408-430 and 437-459; 4 probable transmembrane helices predicted for TA02970 by TMHMM2.0 at aa 298-317, 322-344, 408-430 and 437-459
4 probable transmembrane helices predicted for TA02970 by TMHMM2.0 at aa 298-317, 322-344, 408-430 and 437-459
SMART 1 transmembrane domain at aa 49-71; 1 probable transmembrane helix predicted for TA02975 by TMHMM2.0 at aa 49-71
1 probable transmembrane helix predicted for TA02975 by TMHMM2.0 at aa 49-71
integral membrane protein (apical merozoite antigen), putative
Tap152h01.q1c.C.cand.25 - score = 83.65; SMART pfam:AMA-1 (PF02430) at aa 204-739, E()=1.30e-16; 1 probable transmembrane helix predicted for TA02980 by TMHMM2.0 at aa 693-715
1 probable transmembrane helix predicted for TA02980 by TMHMM2.0 at aa 693-715
Tap152h01.q1c.C.cand.24 - score = 25.81; SMART 2 transmembrane domains at aa 85-107 and 122-141; pfam:CDC50 (PF03381) at aa 228-444, E()=1.10e-03; 3 probable transmembrane helices predicted for TA02985 by TMHMM2.0 at aa 85-107, 122-141 and 412-434
3 probable transmembrane helices predicted for TA02985 by TMHMM2.0 at aa 85-107, 122-141 and 412-434
(subtelomeric) ABC-transporter protein family member, putative
Tap152h01.q1c.C.cand.21 - score = 30.54; SMART pfam:DIM1 (PF02966) at aa 2-190, E()=6.70e-69; 1 probable transmembrane helix predicted for TA03015 by TMHMM2.0 at aa 163-185
1 probable transmembrane helix predicted for TA03015 by TMHMM2.0 at aa 163-185
SMART RAB 38-209, E()=1.96e-72; 1 probable transmembrane helix predicted for TA03030 by TMHMM2.0 at aa 205-227
1 probable transmembrane helix predicted for TA03030 by TMHMM2.0 at aa 205-227
SMART pfam:TP_methylase (PF00590) at aa 2-222, E()=9.50e-07
Tap152h01.q1c.C.cand.16 - score = 28.96; SMART 3 transmembrane domains at aa 12-34, 49-71 and 201-223; 3 probable transmembrane helices predicted for TA03070 by TMHMM2.0 at aa 12-34, 49-71 and 201-223
3 probable transmembrane helices predicted for TA03070 by TMHMM2.0 at aa 12-34, 49-71 and 201-223
Tap152h01.q1c.C.cand.13 - score = 37.22; Signal peptide predicted for TA03110 by SignalP 2.0 HMM (Signal peptide probability 0.996, signal anchor probability 0.000) with cleavage site probability 0.928 between residues 23 and 24
Signal peptide predicted for TA03110 by SignalP 2.0 HMM (Signal peptide probability 0.996, signal anchor probability 0.000) with cleavage site probability 0.928 between residues 23 and 24
Tap152h01.q1c.C.cand.12 - score = 71.37; Signal peptide predicted for TA03115 by SignalP 2.0 HMM (Signal peptide probability 0.860, signal anchor probability 0.006) with cleavage site probability 0.615 between residues 26 and 27
Signal peptide predicted for TA03115 by SignalP 2.0 HMM (Signal peptide probability 0.860, signal anchor probability 0.006) with cleavage site probability 0.615 between residues 26 and 27
Tap152h01.q1c.C.cand.11 - score = 15.22; Signal peptide predicted for TA03120 by SignalP 2.0 HMM (Signal peptide probability 0.874, signal anchor probability 0.060) with cleavage site probability 0.793 between residues 23 and 24
Signal peptide predicted for TA03120 by SignalP 2.0 HMM (Signal peptide probability 0.874, signal anchor probability 0.060) with cleavage site probability 0.793 between residues 23 and 24
Tap152h01.q1c.C.cand.9 - score = 36.44; SMART 1 transmembrane domain at aa 7-26; AT_hook (SM0384) at aa 158-170, E()=5.93e-01; 1 probable transmembrane helix predicted for TA03130 by TMHMM2.0 at aa 7-26
1 probable transmembrane helix predicted for TA03130 by TMHMM2.0 at aa 7-26
Tap152h01.q1c.C.cand.7 - score = 35.04; SMART 1 transmembrane domain at aa 7-26; 3 AT_hook (SM00384) domains at aa 139-151, E()=9.29e-01; 169-181, E()=1.82e-01; and 186-198, E()=1.42e-01; 1 probable transmembrane helix predicted for TA03140 by TMHMM2.0 at aa 7-26; Signal peptide predicted for TA03140 by SignalP 2.0 HMM (Signal peptide probability 0.907, signal anchor probability 0.005) with cleavage site probability 0.876 between residues 23 and 24
1 probable transmembrane helix predicted for TA03140 by TMHMM2.0 at aa 7-26
Signal peptide predicted for TA03140 by SignalP 2.0 HMM (Signal peptide probability 0.907, signal anchor probability 0.005) with cleavage site probability 0.876 between residues 23 and 24
Tap152h01.q1c.C.cand.6 - score = 29.20; SMART 1 transmembrane domain at aa 7-26; 1 probable transmembrane helix predicted for TA03145 by TMHMM2.0 at aa 7-26; Signal peptide predicted for TA03145 by SignalP 2.0 HMM (Signal peptide probability 0.907, signal anchor probability 0.005) with cleavage site probability 0.876 between residues 23 and 24
1 probable transmembrane helix predicted for TA03145 by TMHMM2.0 at aa 7-26
Signal peptide predicted for TA03145 by SignalP 2.0 HMM (Signal peptide probability 0.907, signal anchor probability 0.005) with cleavage site probability 0.876 between residues 23 and 24
Tap152h01.q1c.C.cand.5 - score = 28.77; SMART 1 transmembrane domain at aa 7-26; 1 probable transmembrane helix predicted for TA03150 by TMHMM2.0 at aa 7-26; Signal peptide predicted for TA03150 by SignalP 2.0 HMM (Signal peptide probability 0.907, signal anchor probability 0.005) with cleavage site probability 0.876 between residues 23 and 24
1 probable transmembrane helix predicted for TA03150 by TMHMM2.0 at aa 7-26
Signal peptide predicted for TA03150 by SignalP 2.0 HMM (Signal peptide probability 0.907, signal anchor probability 0.005) with cleavage site probability 0.876 between residues 23 and 24
Tap152h01.q1c.C.cand.4 - score = 26.95; SMART 1 transmembrane domain at aa 7-26; 1 probable transmembrane helix predicted for TA03155 by TMHMM2.0 at aa 7-26; Signal peptide predicted for TA03155 by SignalP 2.0 HMM (Signal peptide probability 0.686, signal anchor probability 0.170) with cleavage site probability 0.623 between residues 23 and 24
1 probable transmembrane helix predicted for TA03155 by TMHMM2.0 at aa 7-26
Signal peptide predicted for TA03155 by SignalP 2.0 HMM (Signal peptide probability 0.686, signal anchor probability 0.170) with cleavage site probability 0.623 between residues 23 and 24
Tap152h01.q1c.C.cand.3 - score = 40.35; SMART 1 transmembrane domain at aa 9-28; 1 probable transmembrane helix predicted for TA03160 by TMHMM2.0 at aa 9-28; Signal peptide predicted for TA03160 by SignalP 2.0 HMM (Signal peptide probability 0.786, signal anchor probability 0.154) with cleavage site probability 0.761 between residues 25 and 26
1 probable transmembrane helix predicted for TA03160 by TMHMM2.0 at aa 9-28
Signal peptide predicted for TA03160 by SignalP 2.0 HMM (Signal peptide probability 0.786, signal anchor probability 0.154) with cleavage site probability 0.761 between residues 25 and 26
Tap152h01.q1c.C.cand.2 - score = 31.89; SMART 1 transmembrane domain at aa 7-26; 1 probable transmembrane helix predicted for TA03165 by TMHMM2.0 at aa 7-26; Signal peptide predicted for TA03165 by SignalP 2.0 HMM (Signal peptide probability 0.907, signal anchor probability 0.005) with cleavage site probability 0.876 between residues 23 and 24
1 probable transmembrane helix predicted for TA03165 by TMHMM2.0 at aa 7-26
Signal peptide predicted for TA03165 by SignalP 2.0 HMM (Signal peptide probability 0.907, signal anchor probability 0.005) with cleavage site probability 0.876 between residues 23 and 24
Signal peptide predicted for TA20082 by SignalP 2.0 HMM (Signal peptide probability 0.774, signal anchor probability 0.000) with cleavage site probability 0.399 between residues 24 and 25
Signal peptide predicted for TA20083 by SignalP 2.0 HMM (Signal peptide probability 0.987, signal anchor probability 0.005) with cleavage site probability 0.837 between residues 23 and 24
Signal peptide predicted for TA20085 by SignalP 2.0 HMM (Signal peptide probability 0.751, signal anchor probability 0.000) with cleavage site probability 0.387 between residues 23 and 24
Signal peptide predicted for TA20090 by SignalP 2.0 HMM (Signal peptide probability 0.987, signal anchor probability 0.005) with cleavage site probability 0.837 between residues 23 and 24
10 probable transmembrane helices predicted for TA20150 by TMHMM2.0 at aa 20-42, 62-79, 92-114, 149-171, 184-206, 250-272, 284-301, 316-335, 356-378 and 388-410; Signal peptide predicted for TA20150 by SignalP 2.0 HMM (Signal peptide probability 0.668, signal anchor probability 0.264) with cleavage site probability 0.471 between residues 37 and 38
Signal peptide predicted for TA20150 by SignalP 2.0 HMM (Signal peptide probability 0.668, signal anchor probability 0.264) with cleavage site probability 0.471 between residues 37 and 38
Contains 1 putative transmembrane domain; 1 probable transmembrane helix predicted for TA20155 by TMHMM2.0 at aa 4-22
1 probable transmembrane helix predicted for TA20155 by TMHMM2.0 at aa 4-22
1 probable transmembrane helix predicted for TA20160 by TMHMM2.0 at aa 2-21
calcium/calmodulin-dependent protein kinase subunit, putative
HAP-family transcription factor, putative
Tap404f10.p1c.C.cand.125 - score = 37.06; 1 probable transmembrane helix predicted for TA20180 by TMHMM2.0 at aa 808-830
1 probable transmembrane helix predicted for TA20180 by TMHMM2.0 at aa 808-830
4 probable transmembrane helices predicted for TA20185 by TMHMM2.0 at aa 172-194, 234-256, 340-362 and 395-417
proteasome subunit alpha type 5-2, putative
Signal peptide predicted for TA20215 by SignalP 2.0 HMM (Signal peptide probability 0.980, signal anchor probability 0.011) with cleavage site probability 0.760 between residues 26 and 27
1 probable transmembrane helix predicted for TA20225 by TMHMM2.0 at aa 64-86
Contains a putative signal sequence; Contains 7 putative transmembrane domains; alternative gene structure possible; 8 probable transmembrane helices predicted for TA20240 by TMHMM2.0 at aa 10-32, 91-113, 123-142, 149-168, 202-224, 412-434, 444-462 and 464-486
Signal peptide predicted for TA20260 by SignalP 2.0 HMM (Signal peptide probability 0.671, signal anchor probability 0.000) with cleavage site probability 0.565 between residues 16 and 17
transcription elongation factor, putative
Signal peptide predicted for TA20310 by SignalP 2.0 HMM (Signal peptide probability 0.956, signal anchor probability 0.000) with cleavage site probability 0.650 between residues 20 and 21
Signal peptide predicted for TA20315 by SignalP 2.0 HMM (Signal peptide probability 1.000, signal anchor probability 0.000) with cleavage site probability 0.964 between residues 17 and 18
5 probable transmembrane helices predicted for TA20320 by TMHMM2.0 at aa 355-377, 390-412, 427-446, 458-480 and 506-528
6 probable transmembrane helices predicted for TA20325 by TMHMM2.0 at aa 10-29, 34-56, 69-88, 93-115, 120-142 and 359-381; Signal anchor predicted for TA20325 by SignalP 2.0 HMM (Signal peptide probability 0.194, signal anchor probability 0.794) with cleavage site probability 0.099 between residues 26 and 27
6 probable transmembrane helices predicted for TA20325 by TMHMM2.0 at aa 10-29, 34-56, 69-88, 93-115, 120-142 and 359-381
Signal anchor predicted for TA20325 by SignalP 2.0 HMM (Signal peptide probability 0.194, signal anchor probability 0.794) with cleavage site probability 0.099 between residues 26 and 27
1 probable transmembrane helix predicted for TA20330 by TMHMM2.0 at aa 513-535
putative transcription initiation protein spt4-like, putatve
1 probable transmembrane helix predicted for TA20345 by TMHMM2.0 at aa 83-105
4 probable transmembrane helices predicted for TA20350 by TMHMM2.0 at aa 302-324, 384-406, 416-435 and 442-459
Phosphoinositide 3-kinase-like protein, putative
1 probable transmembrane helix predicted for TA20395 by TMHMM2.0 at aa 202-224
very weak SMART hit (4.19e+00) to t-SNARE; 1 probable transmembrane helix predicted for TA20420 by TMHMM2.0 at aa 191-213
1 probable transmembrane helix predicted for TA20420 by TMHMM2.0 at aa 191-213
1 probable transmembrane helix predicted for TA20430 by TMHMM2.0 at aa 31-50; Signal anchor predicted for TA20430 by SignalP 2.0 HMM (Signal peptide probability 0.016, signal anchor probability 0.777) with cleavage site probability 0.015 between residues 48 and 49
1 probable transmembrane helix predicted for TA20430 by TMHMM2.0 at aa 31-50
Signal anchor predicted for TA20430 by SignalP 2.0 HMM (Signal peptide probability 0.016, signal anchor probability 0.777) with cleavage site probability 0.015 between residues 48 and 49
Signal peptide predicted for TA20435 by SignalP 2.0 HMM (Signal peptide probability 0.997, signal anchor probability 0.002) with cleavage site probability 0.787 between residues 22 and 23
Apicoplast targetting peptide predicted by the PlasmoAP tool; 3 probable transmembrane helices predicted for TA20440 by TMHMM2.0 at aa 4-26, 143-165 and 223-240; Signal peptide predicted for TA20440 by SignalP 2.0 HMM (Signal peptide probability 0.957, signal anchor probability 0.001) with cleavage site probability 0.615 between residues 22 and 23
Signal peptide predicted for TA20440 by SignalP 2.0 HMM (Signal peptide probability 0.957, signal anchor probability 0.001) with cleavage site probability 0.615 between residues 22 and 23
3 probable transmembrane helices predicted for TA20440 by TMHMM2.0 at aa 4-26, 143-165 and 223-240
long-chain-fatty-acid--coa ligase 5, putative
1-deoxy-D-xylulose 5-phosphate synthase, putative
Significant similarity to 1-deoxy-D-xylulose 5-phosphate synthases of several prokaryotic origin
Shows significant Pfam hit (2.7e-08) to Peptidase_M3 family domain
Contains several Ankyrin repeat elements
myosin a tail domain interacting protein mtip, putative
4 probable transmembrane helices predicted for TA20490 by TMHMM2.0 at aa 30-49, 61-83, 98-120 and 141-163
zinc finger protein with SET domain, putative
Shows weak similarity to PHD (2.56e-02), RING finger (7.87e-01) and SET (9.3e-02) SMART domains
1 probable transmembrane helix predicted for TA20505 by TMHMM2.0 at aa 520-542; Signal peptide predicted for TA20505 by SignalP 2.0 HMM (Signal peptide probability 0.675, signal anchor probability 0.000) with cleavage site probability 0.597 between residues 19 and 20
Signal peptide predicted for TA20505 by SignalP 2.0 HMM (Signal peptide probability 0.675, signal anchor probability 0.000) with cleavage site probability 0.597 between residues 19 and 20
1 probable transmembrane helix predicted for TA20505 by TMHMM2.0 at aa 520-542
ubiquitin-conjugating enzyme e2, putative
DNA replication licensing factor Mcm2, putative
2 probable transmembrane helices predicted for TA20520 by TMHMM2.0 at aa 4-23 and 183-205; Signal peptide predicted for TA20520 by SignalP 2.0 HMM (Signal peptide probability 0.988, signal anchor probability 0.000) with cleavage site probability 0.574 between residues 19 and 20
2 probable transmembrane helices predicted for TA20520 by TMHMM2.0 at aa 4-23 and 183-205
Signal peptide predicted for TA20520 by SignalP 2.0 HMM (Signal peptide probability 0.988, signal anchor probability 0.000) with cleavage site probability 0.574 between residues 19 and 20
peptidylprolyl isomerase-like protein, putative
Moderate Pfam hit (7.4e-05) to TPR domain
riboflavin kinase / fad synthase family protein, putative
Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal peptide predicted for TA20560 by SignalP 2.0 HMM (Signal peptide probability 0.632, signal anchor probability 0.000) with cleavage site probability 0.426 between residues 18 and 19
Signal peptide predicted for TA20560 by SignalP 2.0 HMM (Signal peptide probability 0.632, signal anchor probability 0.000) with cleavage site probability 0.426 between residues 18 and 19
Weak Pfam hit (8.7e-03) to endonuclease/exonuclease/phosphatase family; product call is based on the Pfam match
exosome complex exonuclease rrp44, putative
1 probable transmembrane helix predicted for TA20585 by TMHMM2.0 at aa 163-185
phosphoenolpyruvate carboxykinase, putative
Not conserved protein length-wise in the N-terminal end; Apicoplast targetting peptide predicted by the PlasmoAP tool; 2 probable transmembrane helices predicted for TA20600 by TMHMM2.0 at aa 5-27 and 34-56; Signal anchor predicted for TA20600 by SignalP 2.0 HMM (Signal peptide probability 0.015, signal anchor probability 0.788) with cleavage site probability 0.004 between residues 25 and 26
Signal anchor predicted for TA20600 by SignalP 2.0 HMM (Signal peptide probability 0.015, signal anchor probability 0.788) with cleavage site probability 0.004 between residues 25 and 26
2 probable transmembrane helices predicted for TA20600 by TMHMM2.0 at aa 5-27 and 34-56
udp-N-acetylglucosamine pyrophosphorylase, putative
Contains putative signal peptide; 1 probable transmembrane helix predicted for TA20615 by TMHMM2.0 at aa 13-35; Signal peptide predicted for TA20615 by SignalP 2.0 HMM (Signal peptide probability 0.779, signal anchor probability 0.216) with cleavage site probability 0.151 between residues 39 and 40; GPI-Anchor Signal predicted for TA20615 by DGPI v2.04, no cleavage site predicted
Signal peptide predicted for TA20615 by SignalP 2.0 HMM (Signal peptide probability 0.779, signal anchor probability 0.216) with cleavage site probability 0.151 between residues 39 and 40
1 probable transmembrane helix predicted for TA20615 by TMHMM2.0 at aa 13-35
1 probable transmembrane helix predicted for TA20620 by TMHMM2.0 at aa 5113-5135
u4/u6 small nuclear ribonucleoprotein, putative
glycine cleavage complex t-protein, putative
Signal peptide predicted for TA20640 by SignalP 2.0 HMM (Signal peptide probability 0.621, signal anchor probability 0.018) with cleavage site probability 0.310 between residues 18 and 19
1 probable transmembrane helix predicted for TA20650 by TMHMM2.0 at aa 9-31
Signal peptide predicted for TA20675 by SignalP 2.0 HMM (Signal peptide probability 0.874, signal anchor probability 0.001) with cleavage site probability 0.846 between residues 19 and 20
integral membrane protein, rhomboid family
3 probable transmembrane helices predicted for TA20680 by TMHMM2.0 at aa 394-416, 423-445 and 460-478
1 probable transmembrane helix predicted for TA20685 by TMHMM2.0 at aa 51-73
Contains a putative signal peptide; 1 probable transmembrane helix predicted for TA20690 by TMHMM2.0 at aa 12-31
1 probable transmembrane helix predicted for TA20690 by TMHMM2.0 at aa 12-31
histone acetyltransferase gcn5-related, putative
DNA mismatch repair protein msh2, putative
small overlap at the 3' end with gene TA20750
trna delta (2)-isopentenylpyrophosphate transferase, putative
small overlap at the 3' end with gene TA20745
1 probable transmembrane helix predicted for TA20765 by TMHMM2.0 at aa 13-30
dihydrofolate synthase/folylpolyglutamate synthase, putative
Conserved amino acids present but the matches are not throughout the length of the matching proteins
Signal peptide predicted for TA20781 by SignalP 2.0 HMM (Signal peptide probability 0.932, signal anchor probability 0.000) with cleavage site probability 0.797 between residues 21 and 22; GPI-Anchor Signal predicted for TA20781 by DGPI v2.04, no cleavage site predicted
Signal peptide predicted for TA20781 by SignalP 2.0 HMM (Signal peptide probability 0.932, signal anchor probability 0.000) with cleavage site probability 0.797 between residues 21 and 22
Signal peptide predicted for TA20790 by SignalP 2.0 HMM (Signal peptide probability 0.660, signal anchor probability 0.000) with cleavage site probability 0.462 between residues 17 and 18
Similarity to tata-box binding proteins of several bacteria & 2 malaria species
peptide chain release factor 1, mitochondrial precursor, putative
serine-threonine protein kinase, putative
Weak hit to serine-threonine protein kinase domain
1 probable transmembrane helix predicted for TA20830 by TMHMM2.0 at aa 12-34
ribosomal protein s15, mitochondrial precursor, putative
Part similarity to Plasmodium yoelii (SWALL:EAA20932) and Plasmodium falciparum (SWALL:Q8IE86) hypothetical proteins; Contains a putative signal peptide; Signal peptide predicted for TA20855 by SignalP 2.0 HMM (Signal peptide probability 0.935, signal anchor probability 0.000) with cleavage site probability 0.688 between residues 22 and 23; GPI-Anchor Signal predicted for TA20855 by DGPI v2.04, no cleavage site predicted
Signal peptide predicted for TA20855 by SignalP 2.0 HMM (Signal peptide probability 0.935, signal anchor probability 0.000) with cleavage site probability 0.688 between residues 22 and 23
Signal peptide predicted for TA20870 by SignalP 2.0 HMM (Signal peptide probability 1.000, signal anchor probability 0.000) with cleavage site probability 0.895 between residues 22 and 23
Shows weak hit (8.03e-03) to Pfam LON domain; Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal peptide predicted for TA20890 by SignalP 2.0 HMM (Signal peptide probability 0.924, signal anchor probability 0.011) with cleavage site probability 0.549 between residues 25 and 26
Signal peptide predicted for TA20890 by SignalP 2.0 HMM (Signal peptide probability 0.924, signal anchor probability 0.011) with cleavage site probability 0.549 between residues 25 and 26
acidic leucine-rich nuclear phosphoprotein 32 family, putative
exosome complex exonuclease rrp41, putative
Significantly similar to a conserved protein annotated as 'developmental protein' in plants
beta subunit of coatomer complex, putative
Signal peptide predicted for TA20930 by SignalP 2.0 HMM (Signal peptide probability 0.866, signal anchor probability 0.133) with cleavage site probability 0.736 between residues 33 and 34
Later start possible using a downstream methionine codon in the exon I; 1 probable transmembrane helix predicted for TA20940 by TMHMM2.0 at aa 9-27
1 probable transmembrane helix predicted for TA20940 by TMHMM2.0 at aa 9-27
ATP synthase beta chain, mitochondrial precursor, putative
Weak SMART hit (e=0.08) to MIF4G domain, found in eIF4G and other rna-binding proteins
rhomboid family integral membrane protein, putative
Shows weak Pfam hit (5.8e-03) to Rhomboid family protein domain; 5 probable transmembrane helices predicted for TA20965 by TMHMM2.0 at aa 210-232, 292-314, 329-351, 376-398 and 413-435
5 probable transmembrane helices predicted for TA20965 by TMHMM2.0 at aa 210-232, 292-314, 329-351, 376-398 and 413-435
Contains one putative transmembrane domain; 1 probable transmembrane helix predicted for TA20970 by TMHMM2.0 at aa 358-380
1 probable transmembrane helix predicted for TA20970 by TMHMM2.0 at aa 358-380
deoxyuridine 5'-triphosphate nucleotidohydrolase, putative
Contains a putative signal peptide; Signal peptide predicted for TA20980 by SignalP 2.0 HMM (Signal peptide probability 1.000, signal anchor probability 0.000) with cleavage site probability 0.982 between residues 19 and 20
Signal peptide predicted for TA20980 by SignalP 2.0 HMM (Signal peptide probability 1.000, signal anchor probability 0.000) with cleavage site probability 0.982 between residues 19 and 20
Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal peptide predicted for TA20985 by SignalP 2.0 HMM (Signal peptide probability 0.998, signal anchor probability 0.000) with cleavage site probability 0.834 between residues 19 and 20
Signal peptide predicted for TA20985 by SignalP 2.0 HMM (Signal peptide probability 0.998, signal anchor probability 0.000) with cleavage site probability 0.834 between residues 19 and 20
Signal peptide predicted for TA20990 by SignalP 2.0 HMM (Signal peptide probability 0.995, signal anchor probability 0.000) with cleavage site probability 0.837 between residues 21 and 22
trna (guanine-n-(7))-methyltransferase, putative
1 probable transmembrane helix predicted for TA20995 by TMHMM2.0 at aa 201-223
small nuclear ribonucleoprotein f, putative
2 probable transmembrane helices predicted for tmhmm2embl_unknown_000000_1840114_1841707 by TMHMM2.0 at aa 10-32 and 44-66; Signal anchor predicted for TA21005 by SignalP 2.0 HMM (Signal peptide probability 0.037, signal anchor probability 0.861) with cleavage site probability 0.017 between residues 25 and 26
2 probable transmembrane helices predicted for tmhmm2embl_unknown_000000_1840114_1841707 by TMHMM2.0 at aa 10-32 and 44-66
Signal anchor predicted for TA21005 by SignalP 2.0 HMM (Signal peptide probability 0.037, signal anchor probability 0.861) with cleavage site probability 0.017 between residues 25 and 26
protein transport protein sec24-like, putative
Signal peptide predicted for TA21040 by SignalP 2.0 HMM (Signal peptide probability 0.614, signal anchor probability 0.002) with cleavage site probability 0.277 between residues 15 and 16; GPI-Anchor Signal predicted for TA21040 by DGPI v2.04, no cleavage site predicted
Signal peptide predicted for TA21040 by SignalP 2.0 HMM (Signal peptide probability 0.614, signal anchor probability 0.002) with cleavage site probability 0.277 between residues 15 and 16
Contains a putative signal peptide; Signal peptide predicted for TA21045 by SignalP 2.0 HMM (Signal peptide probability 1.000, signal anchor probability 0.000) with cleavage site probability 0.962 between residues 17 and 18
Signal peptide predicted for TA21045 by SignalP 2.0 HMM (Signal peptide probability 1.000, signal anchor probability 0.000) with cleavage site probability 0.962 between residues 17 and 18
1 probable transmembrane helix predicted for TA21050 by TMHMM2.0 at aa 138-160
proliferation-associated protein 2g4, putative
Contains 1 putative transmembrane domain; 1 probable transmembrane helix predicted for TA21055 by TMHMM2.0 at aa 362-384
1 probable transmembrane helix predicted for TA21055 by TMHMM2.0 at aa 362-384
Signal peptide predicted for TA21120 by SignalP 2.0 HMM (Signal peptide probability 0.843, signal anchor probability 0.000) with cleavage site probability 0.734 between residues 14 and 15
1 probable transmembrane helix predicted for TA21155 by TMHMM2.0 at aa 34-56
2 probable transmembrane helices predicted for TA21165 by TMHMM2.0 at aa 24-46 and 143-165
Smaller than other cyclophilins; no Pfam hit to cyclophilin domain but significant hit to rrm domain; thus, annotated as rna-bing protein
eukaryotic translation initiation factor 2 gamma subunit, putative
Very weak hit to ZnF_MFX domain; a type of zinc binding domain found in zinc finger proteins; no similarity to other zinc finger proteins; hence, annotated as a hypothetical protein
Contains a putative signal peptide; 1 probable transmembrane helix predicted for TA21200 by TMHMM2.0 at aa 20-37
1 probable transmembrane helix predicted for TA21200 by TMHMM2.0 at aa 20-37
Signal peptide predicted for TA21205 by SignalP 2.0 HMM (Signal peptide probability 0.978, signal anchor probability 0.000) with cleavage site probability 0.412 between residues 21 and 22
Shows moderate Pfam hit(7.0e-05) to UPF0054 domain
Contains a putative Bromodomain (1.75e-12) and shows weak hit to C2HC type zinc-finger domain (1.67e-01)
1 probable transmembrane helix predicted for TA21230 by TMHMM2.0 at aa 221-243; Signal peptide predicted for TA21230 by SignalP 2.0 HMM (Signal peptide probability 0.765, signal anchor probability 0.000) with cleavage site probability 0.573 between residues 22 and 23
Signal peptide predicted for TA21230 by SignalP 2.0 HMM (Signal peptide probability 0.765, signal anchor probability 0.000) with cleavage site probability 0.573 between residues 22 and 23
1 probable transmembrane helix predicted for TA21230 by TMHMM2.0 at aa 221-243
SMART 1 transmembrane domain at aa 89-111; 1 probable transmembrane helix predicted for TA21250 by TMHMM2.0 at aa 89-111
1 probable transmembrane helix predicted for TA21250 by TMHMM2.0 at aa 89-111
Tap404f10.p1c.cand.118 - score = 43.62; SMART pfam:glutaredoxin (Pf00462) at aa 63-124, E()=1.30e-20; Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal peptide predicted for TA21260 by SignalP 2.0 HMM (Signal peptide probability 0.952, signal anchor probability 0.040) with cleavage site probability 0.652 between residues 24 and 25
Signal peptide predicted for TA21260 by SignalP 2.0 HMM (Signal peptide probability 0.952, signal anchor probability 0.040) with cleavage site probability 0.652 between residues 24 and 25
serine protease (zymogen-like), putative
Tap404f10.p1c.cand.119 - score = 10.37; SMART pfam:Ribosomal_L10 (PF00466) at aa 55-161, E()=4.10e-02; Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal peptide predicted for TA21270 by SignalP 2.0 HMM (Signal peptide probability 0.998, signal anchor probability 0.002) with cleavage site probability 0.630 between residues 22 and 23
Signal peptide predicted for TA21270 by SignalP 2.0 HMM (Signal peptide probability 0.998, signal anchor probability 0.002) with cleavage site probability 0.630 between residues 22 and 23
ubiquitin carboxyl-terminal hydrolase (UBP14)
SMART 3 transmembrane domains at aa 4-26, 314-336 and 356-378; Apicoplast targetting peptide predicted by the PlasmoAP tool; 3 probable transmembrane helices predicted for TA21280 by TMHMM2.0 at aa 4-26, 314-336 and 356-378; Signal anchor predicted for TA21280 by SignalP 2.0 HMM (Signal peptide probability 0.049, signal anchor probability 0.781) with cleavage site probability 0.018 between residues 24 and 25
Signal anchor predicted for TA21280 by SignalP 2.0 HMM (Signal peptide probability 0.049, signal anchor probability 0.781) with cleavage site probability 0.018 between residues 24 and 25
3 probable transmembrane helices predicted for TA21280 by TMHMM2.0 at aa 4-26, 314-336 and 356-378
eukaryotic translation initiation factor (eiF3 delta)
molecular chaperone (DnaJ-like), putative
small overlap at the 5' end with gene TA21315
1 probable transmembrane helix predicted for TA21315 by TMHMM2.0 at aa 13-35; small overlap at the 5' end with gene TA21310
1 probable transmembrane helix predicted for TA21315 by TMHMM2.0 at aa 13-35
glycerol-3-phosphate dehydrogenase (gpdh), putative
hydroxyacylglutathione hydrolase, putative
SMART 3 transmembrane domains at aa 20-42, 52-71 and 78-100; 3 probable transmembrane helices predicted for TA21370 by TMHMM2.0 at aa 20-42, 52-71 and 78-100; Signal anchor predicted for TA21370 by SignalP 2.0 HMM (Signal peptide probability 0.010, signal anchor probability 0.843) with cleavage site probability 0.003 between residues 42 and 43
Signal anchor predicted for TA21370 by SignalP 2.0 HMM (Signal peptide probability 0.010, signal anchor probability 0.843) with cleavage site probability 0.003 between residues 42 and 43
3 probable transmembrane helices predicted for TA21370 by TMHMM2.0 at aa 20-42, 52-71 and 78-100
Theileria parva Tpr-related protein, putative
small overlap at the 3' end with gene TA21395; SMART 2 transmembrane domains at aa 348-370 and 563-585; 2 probable transmembrane helices predicted for TA21390 by TMHMM2.0 at aa 348-370 and 563-585
2 probable transmembrane helices predicted for TA21390 by TMHMM2.0 at aa 348-370 and 563-585
small overlap at the 3' end with gene TA21390; SMART 1 transmembrane domain at aa 15-37; 1 probable transmembrane helix predicted for TA21395 by TMHMM2.0 at aa 15-37
1 probable transmembrane helix predicted for TA21395 by TMHMM2.0 at aa 15-37
226S proteasome regulatory particle, putative
SMC (structural maintenance of chromosome) protein (type 1), putative
SMART 2 RRM (SM0360) at aa 26-104, E()=2.56e+00; 130-197, E()=3.04e-05; 1 transmembrane domain at aa 226-248; 1 probable transmembrane helix predicted for TA21420 by TMHMM2.0 at aa 226-248; GPI-Anchor Signal predicted for TA21420 by DGPI v2.04, no cleavage site predicted
1 probable transmembrane helix predicted for TA21420 by TMHMM2.0 at aa 226-248
Tap404f10.p1c.cand.134 - score = 101.54; GPI-Anchor Signal predicted for TA21430 by DGPI v2.04 with cleavage site probability 0.2924 near 1292
GPI-Anchor Signal predicted for TA21430 by DGPI v2.04 with cleavage site probability 0.2924 near 1292
translation elongation factor G (EF-G), putative
Tap404f10.p1c.cand.136 - score = 78.21; SMART pfam:GTP_EFTU (PF00009) at aa 97-395, E()=1.90e-82; pfam:GTP_EFTU_D2 (PF03144) at aa 445-523, E()=5.10e-21; pfam:EFG_C (PF00679) at aa 644-816, E()=1.70e-76; Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal anchor predicted for TA21450 by SignalP 2.0 HMM (Signal peptide probability 0.158, signal anchor probability 0.765) with cleavage site probability 0.130 between residues 24 and 25
Signal anchor predicted for TA21450 by SignalP 2.0 HMM (Signal peptide probability 0.158, signal anchor probability 0.765) with cleavage site probability 0.130 between residues 24 and 25
p23 (translationally controlled tumor protein homolog), putative
Signal peptide predicted for TA21470 by SignalP 2.0 HMM (Signal peptide probability 0.924, signal anchor probability 0.019) with cleavage site probability 0.805 between residues 26 and 27
Signal anchor predicted for TA21510 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 0.985) with cleavage site probability 0.000 between residues 49 and 50
SMART 8 transmembrane domains at aa 77-96, 101-123, 129-151, 210-232, 259-281, 302-324, 339-361 and 554-576; 12 probable transmembrane helices predicted for TA21515 by TMHMM2.0 at aa 25-47, 77-96, 101-123, 129-151, 210-232, 259-281, 302-324, 339-361, 554-576, 1751-1769, 1877-1899 and 1914-1936; Signal anchor predicted for TA21515 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 0.985) with cleavage site probability 0.000 between residues 49 and 50
Signal anchor predicted for TA21515 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 0.985) with cleavage site probability 0.000 between residues 49 and 50
Weak SMART hit (7.9e-01) to MATH (meprin & TRAF homology domain; part of the protein has considerable similarity to P. falciparum hypothetical protein pfe0570W
dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial precursor, putative
Signal peptide predicted for TA19685 by SignalP 2.0 HMM (Signal peptide probability 0.927, signal anchor probability 0.000) with cleavage site probability 0.398 between residues 21 and 22
1 probable transmembrane helix predicted for TA19650 by TMHMM2.0 at aa 30-52; Signal peptide predicted for TA19650 by SignalP 2.0 HMM (Signal peptide probability 0.733, signal anchor probability 0.264) with cleavage site probability 0.664 between residues 51 and 52
1 probable transmembrane helix predicted for TA19650 by TMHMM2.0 at aa 30-52
Signal peptide predicted for TA19650 by SignalP 2.0 HMM (Signal peptide probability 0.733, signal anchor probability 0.264) with cleavage site probability 0.664 between residues 51 and 52
4 probable transmembrane helices predicted for TA19645 by TMHMM2.0 at aa 117-139, 203-225, 297-319 and 332-354
Signal peptide predicted for TA19635 by SignalP 2.0 HMM (Signal peptide probability 0.906, signal anchor probability 0.000) with cleavage site probability 0.389 between residues 26 and 27
Alternative gene structure possible; 1 or more introns possible in exon 9 in the current gene model; contains 5 putative transmembrane domains; 6 probable transmembrane helices predicted for TA19620 by TMHMM2.0 at aa 144-166, 222-244, 251-273, 383-405, 452-474 and 489-511
6 probable transmembrane helices predicted for TA19620 by TMHMM2.0 at aa 144-166, 222-244, 251-273, 383-405, 452-474 and 489-511
Contains conserved domain; weak Pafm hit (9.3e-01) to DUF164 domain
Weak Pfam hit (3.9e-02) to mRNA_triPase domain
Signal peptide predicted for TA19600 by SignalP 2.0 HMM (Signal peptide probability 0.608, signal anchor probability 0.198) with cleavage site probability 0.308 between residues 24 and 25
damage-specific DNA binding protein 1, putative
t-cell activation-related wd repeat protein, putative
chaperonin containing tcp-1 delta subunit, putative
Contains putative WD40 repeat domains; Shows weak Pfam hit (2.3e-03) to CCCH type zinc finger domain
eukaryotic translation initiation factor 3 subunit 10, putative
DNA-directed RNA polymerases i, ii, and iii 17.1 kDa polypeptide, putative
DNA-directed RNA polymerase ii, putative
Ahp/TSA family-related protein, putative
glycerol-3-phosphate acyltransferase, putative
2 probable transmembrane helices predicted for TA19480 by TMHMM2.0 at aa 392-414 and 441-463
3 probable transmembrane helices predicted for TA19475 by TMHMM2.0 at aa 26-45, 60-82 and 95-117; Signal anchor predicted for TA19475 by SignalP 2.0 HMM (Signal peptide probability 0.007, signal anchor probability 0.980) with cleavage site probability 0.006 between residues 46 and 47
3 probable transmembrane helices predicted for TA19475 by TMHMM2.0 at aa 26-45, 60-82 and 95-117
Signal anchor predicted for TA19475 by SignalP 2.0 HMM (Signal peptide probability 0.007, signal anchor probability 0.980) with cleavage site probability 0.006 between residues 46 and 47
pp1-like protein serine/threonine phosphatase, putative
Weak SMART & Pfam hit to serine-Threonine protein kinase domain at the C-terminal end of this hypothetical protein; it is possible that this coding exons may code for 2-3 separate hypothetical genes
Signal peptide predicted for TA19440 by SignalP 2.0 HMM (Signal peptide probability 0.882, signal anchor probability 0.027) with cleavage site probability 0.650 between residues 18 and 19
succinate dehydrogenase [ubiquinone] iron-sulfur protein, putative
bromodomain-containing protein, putative
Contains Bromodomain (Pfam & SMART hits)
Contains 1 putative transmembrane domain; 1 probable transmembrane helix predicted for TA19410 by TMHMM2.0 at aa 143-165
1 probable transmembrane helix predicted for TA19410 by TMHMM2.0 at aa 143-165
Contains possible LisH-like and WD40 domains
ATP synthase gamma chain, mitochondrial precursor, putative
Several FATSA hits to possible GTP-binding proteins
Contains a putative signal sequence; Signal peptide predicted for TA19365 by SignalP 2.0 HMM (Signal peptide probability 0.954, signal anchor probability 0.000) with cleavage site probability 0.933 between residues 22 and 23
Signal peptide predicted for TA19365 by SignalP 2.0 HMM (Signal peptide probability 0.954, signal anchor probability 0.000) with cleavage site probability 0.933 between residues 22 and 23
Contains 1 putative transmembrane domain; Apicoplast targetting peptide predicted by the PlasmoAP tool; 1 probable transmembrane helix predicted for TA19360 by TMHMM2.0 at aa 12-34; Signal anchor predicted for TA19360 by SignalP 2.0 HMM (Signal peptide probability 0.097, signal anchor probability 0.841) with cleavage site probability 0.069 between residues 30 and 31
Signal anchor predicted for TA19360 by SignalP 2.0 HMM (Signal peptide probability 0.097, signal anchor probability 0.841) with cleavage site probability 0.069 between residues 30 and 31
1 probable transmembrane helix predicted for TA19360 by TMHMM2.0 at aa 12-34
Contains significant SMART hit to actin domain
6-phosphogluconate dehydrogenase, putative
RNaseP-like protein with Nifu domain, putative
Contains siginifant hit(3.8e-38) to Pfam N-terminal NifU-like domain (ExonII) and moderate Pfam hit (5.6e-04) to RNAse_P_Rpp14 domain (ExonI); it is possible that the 2 exons code for 2 separate proteins: the exonI containing gene codes for a RNAseP-related protein and the Exon II containing gene codes for a NifU-like protein (appropriate gene models for such a case are indicated as misc. features; however, in that circumstances, there will be a 4 bp overlap between the end & beginning of the 2 adjacent genes!)
peptidyl-prolyl cis-trans isomerase, putative
The amino acid residues that have been shown to be important for cyclosporin-binding (Berriman et al 1998; PMID:9716503) are not conserved in this cyclophilin; thus no EC number was not assigned at the time of annotation; if it was enzymatically active then the designated EC_number would have been 5.2.1.8
Signal peptide predicted for TA19320 by SignalP 2.0 HMM (Signal peptide probability 0.918, signal anchor probability 0.027) with cleavage site probability 0.321 between residues 27 and 28
proteasome subunit beta type 2, putative
DNA mismatch repair protein, MutS family, putative
putative u3 small nucleolar RNA-associated protein 11, putative
1 probable transmembrane helix predicted for TA19290 by TMHMM2.0 at aa 10-32
Contains a putative signal sequence; Signal peptide predicted for TA19275 by SignalP 2.0 HMM (Signal peptide probability 0.989, signal anchor probability 0.000) with cleavage site probability 0.731 between residues 21 and 22
Signal peptide predicted for TA19275 by SignalP 2.0 HMM (Signal peptide probability 0.989, signal anchor probability 0.000) with cleavage site probability 0.731 between residues 21 and 22
Predominantly plant-type 2-cys peroxiredoxin
5 probable transmembrane helices predicted for TA19265 by TMHMM2.0 at aa 34-56, 63-85, 100-122, 129-151 and 171-193
Signal peptide predicted for TA19255 by SignalP 2.0 HMM (Signal peptide probability 0.741, signal anchor probability 0.166) with cleavage site probability 0.553 between residues 26 and 27
Signal peptide predicted for TA19245 by SignalP 2.0 HMM (Signal peptide probability 0.946, signal anchor probability 0.000) with cleavage site probability 0.841 between residues 19 and 20
type ii proteins geranylgeranyltransferase beta subunit, putative
13 probable transmembrane helices predicted for TA19235 by TMHMM2.0 at aa 9-31, 597-619, 632-654, 699-721, 783-805, 837-856, 877-899, 933-955, 972-994, 1009-1028, 1105-1127, 1171-1193 and 1216-1238; Signal anchor predicted for TA19235 by SignalP 2.0 HMM (Signal peptide probability 0.125, signal anchor probability 0.861) with cleavage site probability 0.032 between residues 30 and 31
Signal anchor predicted for TA19235 by SignalP 2.0 HMM (Signal peptide probability 0.125, signal anchor probability 0.861) with cleavage site probability 0.032 between residues 30 and 31
Signal peptide predicted for TA19230 by SignalP 2.0 HMM (Signal peptide probability 0.784, signal anchor probability 0.000) with cleavage site probability 0.297 between residues 19 and 20
translation initiation factor eif-2b epsilon subunit, putative
Weak similarity (4.5e-04)to Pfam & SMART MACPF (membrane attack complex perforin function); contains a putative signal sequence; alternative gene emodel possible; existence of the first three exons uncertain
The intron between ExonII & ExonIII is unsure; alternative gene model possible; 1 probable transmembrane helix predicted for TA19195 by TMHMM2.0 at aa 2-24; Signal peptide predicted for TA19195 by SignalP 2.0 HMM (Signal peptide probability 0.948, signal anchor probability 0.002) with cleavage site probability 0.552 between residues 20 and 21
1 probable transmembrane helix predicted for TA19195 by TMHMM2.0 at aa 2-24
Signal peptide predicted for TA19195 by SignalP 2.0 HMM (Signal peptide probability 0.948, signal anchor probability 0.002) with cleavage site probability 0.552 between residues 20 and 21
Annotation is based on significant Pfam & SMART hits to UBX & UAS domains
rad3-like DNA helicase-related, putative
mitochondrial processing peptidase, putative
This hypothetical protein may have 1 or more downstream exons
Contains a putative signal sequence; one small intron possible; Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal peptide predicted for TA19075 by SignalP 2.0 HMM (Signal peptide probability 0.970, signal anchor probability 0.029) with cleavage site probability 0.650 between residues 27 and 28
Signal peptide predicted for TA19075 by SignalP 2.0 HMM (Signal peptide probability 0.970, signal anchor probability 0.029) with cleavage site probability 0.650 between residues 27 and 28
chromatin assembly factor 1 protein, putative
Weak Pfam hit to ribosomal L32P protein family, BLAST similarities to chloroplast 50s ribosomal protein l32; however, the evidence is not strong enough to call it a ribosomal L32-related protein; Signal peptide predicted for TA19045 by SignalP 2.0 HMM (Signal peptide probability 0.817, signal anchor probability 0.000) with cleavage site probability 0.301 between residues 15 and 16
Signal peptide predicted for TA19045 by SignalP 2.0 HMM (Signal peptide probability 0.817, signal anchor probability 0.000) with cleavage site probability 0.301 between residues 15 and 16
Contains one putative transmembrane domain; 1 probable transmembrane helix predicted for TA19020 by TMHMM2.0 at aa 13-35
1 probable transmembrane helix predicted for TA19020 by TMHMM2.0 at aa 13-35
It is possible that this hypothetical protein is composed of 2 hypothetical proteins, the first 9 exons represent the first hypothetical protein and the last three exons representing the other hypothetical protein; Part of the protein is similar to Plasmodium falciparum hypothetical protein pfe1320W
protein disulfide isomerase precursor, putative
1 probable transmembrane helix predicted for TA19010 by TMHMM2.0 at aa 9-31
transcriptional adaptor2-related protein, putative
ubiquitin-activating enzyme e1, putative
GPI-Anchor Signal predicted for TA18995 by DGPI v2.04 with cleavage site probability 0.15599999 near 526
DNA-directed RNA polymerase alpha chain, putative
The first ~150 amino acids don't show any conservedness with other DNA-directed RNA polymerase alpha chains; Apicoplast targetting peptide predicted by the PlasmoAP tool; 1 probable transmembrane helix predicted for TA18990 by TMHMM2.0 at aa 5-24; Signal peptide predicted for TA18990 by SignalP 2.0 HMM (Signal peptide probability 0.952, signal anchor probability 0.003) with cleavage site probability 0.785 between residues 20 and 21
1 probable transmembrane helix predicted for TA18990 by TMHMM2.0 at aa 5-24
Signal peptide predicted for TA18990 by SignalP 2.0 HMM (Signal peptide probability 0.952, signal anchor probability 0.003) with cleavage site probability 0.785 between residues 20 and 21
No significant SMART / Pfam hit but hightly conserved with several other hypothetical proteins from diverse organisms, alternative gene model possible with the last exon being completely different; the first exon may code for a a seperate hypothetical protein; the conserved residues start from exon II in the present model
Although this protein shows FASTA and BLAST similarity to SMC proteins, there is no hit in Pfam database for SMC_N & SMC_C domains; thus this protein is annotated as possible SMC-like protein
long-chain-fatty-acid--coa ligase, putative
udp-N-acetylglucosamine--dolichyl-phosphate n-acetylglucosaminephosphotransferase, putative
10 probable transmembrane helices predicted for TA18965 by TMHMM2.0 at aa 16-38, 48-70, 91-113, 128-150, 190-212, 253-275, 280-299, 309-328, 348-362 and 367-389; Signal anchor predicted for TA18965 by SignalP 2.0 HMM (Signal peptide probability 0.010, signal anchor probability 0.988) with cleavage site probability 0.004 between residues 32 and 33; GPI-Anchor Signal predicted for TA18965 by DGPI v2.04 with cleavage site probability 0.12900001 near 370
Signal anchor predicted for TA18965 by SignalP 2.0 HMM (Signal peptide probability 0.010, signal anchor probability 0.988) with cleavage site probability 0.004 between residues 32 and 33
GPI-Anchor Signal predicted for TA18965 by DGPI v2.04 with cleavage site probability 0.12900001 near 370
Weak Pfam hit to lactamase_B (Metallo beta lactamase superfamily)
Shows moderate similarities to human / mouse immunoglobulin-binding protein 1 but does not show any Pfam hit
Strong Pfam hit to methyltransf_5 (MraW methylase family)
Contains 2 putative transmembrane domains; 2 probable transmembrane helices predicted for TA18935 by TMHMM2.0 at aa 13-30 and 70-89
2 probable transmembrane helices predicted for TA18935 by TMHMM2.0 at aa 13-30 and 70-89
One or two additional N-terminal exons possible
Weak SMART hit to KOW (Kyprides, Ouzounis, Woese) motif
Contains 1 putative transmembrane domain
cytochrome c oxidase assembly protein-like, putative
No Pfam hit; So annotated as cytochrome c oxidase assembly protein-like, based on FASTA and BLAST similarities; 1 probable transmembrane helix predicted for TA20075 by TMHMM2.0 at aa 98-120
1 probable transmembrane helix predicted for TA20075 by TMHMM2.0 at aa 98-120
ATP-dependent RNA helicase-related protein, putative
Alternative gene model possible, no hit to SMART / Pfam domains
fructose-bisphosphate aldolase 2, putative
methyl transferase-like protein, putative
No SMART / Pfam hit; similarities to methyl transferases and shk1 kinase-binding protein 1 from human and shk1 kinase-binding protein from S. pombe
Weak hit to von Willebrand Factor type A domain
Contains 2 putative transmembrane domains and a putative signal peptide; 3 probable transmembrane helices predicted for TA20040 by TMHMM2.0 at aa 13-32, 47-69 and 90-109; Signal anchor predicted for TA20040 by SignalP 2.0 HMM (Signal peptide probability 0.314, signal anchor probability 0.675) with cleavage site probability 0.166 between residues 33 and 34
Signal anchor predicted for TA20040 by SignalP 2.0 HMM (Signal peptide probability 0.314, signal anchor probability 0.675) with cleavage site probability 0.166 between residues 33 and 34
3 probable transmembrane helices predicted for TA20040 by TMHMM2.0 at aa 13-32, 47-69 and 90-109
Contains two putative transmembrane domains; 2 probable transmembrane helices predicted for TA20035 by TMHMM2.0 at aa 219-241 and 271-290
2 probable transmembrane helices predicted for TA20035 by TMHMM2.0 at aa 219-241 and 271-290
cytochrome c oxidase subunit 2a, putative
1 probable transmembrane helix predicted for TA20025 by TMHMM2.0 at aa 210-232
polynucleotide kinase 3'-phosphatase-like protein, putative
No Pfam or SMART or TIGRfam hits; so annotated as polynucleotide kinase 3'-phosphatase-like protein, based on the FASTA and BLAST evidence
Contains RNA-binding HAT (Half A TPR) repeat units, found in RNA-processing proteins
Contains hits to Pfam RRM and WW domains
Very wqeak similarity to t-SNARE SMART domain, contains a putative transmembrane domain; 1 probable transmembrane helix predicted for TA19995 by TMHMM2.0 at aa 192-214
1 probable transmembrane helix predicted for TA19995 by TMHMM2.0 at aa 192-214
protein phosphatase 2A regulatory subunit B, putative
Contains putative three transmembrane domains, moderatly similar to C-terminal half of P. falciparum hypothetical protein mal6p1.308; 3 probable transmembrane helices predicted for TA19975 by TMHMM2.0 at aa 233-255, 267-289 and 309-328
3 probable transmembrane helices predicted for TA19975 by TMHMM2.0 at aa 233-255, 267-289 and 309-328
Weak BLAST similarity to Homo sapiens general transcription factor ii-i
orotate phosphoribosyltransferase, putative
Alternative first exon possible; Signal peptide predicted for TA19930 by SignalP 2.0 HMM (Signal peptide probability 0.897, signal anchor probability 0.000) with cleavage site probability 0.536 between residues 26 and 27
Signal peptide predicted for TA19930 by SignalP 2.0 HMM (Signal peptide probability 0.897, signal anchor probability 0.000) with cleavage site probability 0.536 between residues 26 and 27
Jumonji family zinc finger protein, putative
GPI-Anchor Signal predicted for TA19915 by DGPI v2.04, no cleavage site predicted
Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal peptide predicted for TA19905 by SignalP 2.0 HMM (Signal peptide probability 0.998, signal anchor probability 0.000) with cleavage site probability 0.664 between residues 18 and 19
Signal peptide predicted for TA19905 by SignalP 2.0 HMM (Signal peptide probability 0.998, signal anchor probability 0.000) with cleavage site probability 0.664 between residues 18 and 19
Moderate Pfam hit to NifU-like domain; Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal peptide predicted for TA19885 by SignalP 2.0 HMM (Signal peptide probability 0.971, signal anchor probability 0.000) with cleavage site probability 0.863 between residues 17 and 18
Signal peptide predicted for TA19885 by SignalP 2.0 HMM (Signal peptide probability 0.971, signal anchor probability 0.000) with cleavage site probability 0.863 between residues 17 and 18
Contains putative signal peptide; 1 probable transmembrane helix predicted for TA19870 by TMHMM2.0 at aa 7-29
1 probable transmembrane helix predicted for TA19870 by TMHMM2.0 at aa 7-29
Signal peptide predicted for TA19865 by SignalP 2.0 HMM (Signal peptide probability 0.968, signal anchor probability 0.024) with cleavage site probability 0.890 between residues 23 and 24
Existence of the intron is uncertain, thus alternative gene model possible; weak similarity to C2H2-zinc finger Pfam domain
small overlap at the 3' end with gene TA19830
Kelch-domain containing protein, putative
Contains Kelch domain; Apicoplast targetting peptide predicted by the PlasmoAP tool; 1 probable transmembrane helix predicted for TA19830 by TMHMM2.0 at aa 424-442; Signal peptide predicted for TA19830 by SignalP 2.0 HMM (Signal peptide probability 0.998, signal anchor probability 0.000) with cleavage site probability 0.341 between residues 22 and 23; small overlap at the 3' end with gene TA19835
1 probable transmembrane helix predicted for TA19830 by TMHMM2.0 at aa 424-442
Signal peptide predicted for TA19830 by SignalP 2.0 HMM (Signal peptide probability 0.998, signal anchor probability 0.000) with cleavage site probability 0.341 between residues 22 and 23
Contains 1 putative membrane-spanning region; 1 probable transmembrane helix predicted for TA19820 by TMHMM2.0 at aa 5-27
1 probable transmembrane helix predicted for TA19820 by TMHMM2.0 at aa 5-27
u3 small nucleolar ribonucleoprotein, putative
origin recognition complex-like protein, putative
Moderate FASTA hit to origin recognition complexes from diverse origin such as P. falciparum, X. laevis and M. musculus
Signal peptide predicted for TA19760 by SignalP 2.0 HMM (Signal peptide probability 0.900, signal anchor probability 0.026) with cleavage site probability 0.318 between residues 26 and 27
Weak match to P. falciparum DNA-directed RNA polymerase beta' chain; 1 probable transmembrane helix predicted for TA19750 by TMHMM2.0 at aa 375-397
1 probable transmembrane helix predicted for TA19750 by TMHMM2.0 at aa 375-397
aspartyl/glutamyl-trna amido transferase, putative
1 probable transmembrane helix predicted for TA19745 by TMHMM2.0 at aa 2-24
TapCf04.q1c.cand.11 - score = 35.73; 1 probable transmembrane helix predicted for TA19730 by TMHMM2.0 at aa 7-29
1 probable transmembrane helix predicted for TA19730 by TMHMM2.0 at aa 7-29
1 probable transmembrane helix predicted for TA19720 by TMHMM2.0 at aa 385-407
Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal peptide predicted for TA19670 by SignalP 2.0 HMM (Signal peptide probability 0.843, signal anchor probability 0.033) with cleavage site probability 0.520 between residues 23 and 24
Signal peptide predicted for TA19670 by SignalP 2.0 HMM (Signal peptide probability 0.843, signal anchor probability 0.033) with cleavage site probability 0.520 between residues 23 and 24
Similar to several sortilin-like proteins; 1 probable transmembrane helix predicted for TA19555 by TMHMM2.0 at aa 769-788
1 probable transmembrane helix predicted for TA19555 by TMHMM2.0 at aa 769-788
1 probable transmembrane helix predicted for TA19445 by TMHMM2.0 at aa 13-35; GPI-Anchor Signal predicted for TA19445 by DGPI v2.04 with cleavage site probability 0.12900001 near 609
1 probable transmembrane helix predicted for TA19445 by TMHMM2.0 at aa 13-35
GPI-Anchor Signal predicted for TA19445 by DGPI v2.04 with cleavage site probability 0.12900001 near 609
1 probable transmembrane helix predicted for TA19390 by TMHMM2.0 at aa 606-628
1 probable transmembrane helix predicted for TA19280 by TMHMM2.0 at aa 7-26; Signal peptide predicted for TA19280 by SignalP 2.0 HMM (Signal peptide probability 0.838, signal anchor probability 0.022) with cleavage site probability 0.378 between residues 23 and 24
Signal peptide predicted for TA19280 by SignalP 2.0 HMM (Signal peptide probability 0.838, signal anchor probability 0.022) with cleavage site probability 0.378 between residues 23 and 24
1 probable transmembrane helix predicted for TA19280 by TMHMM2.0 at aa 7-26
1 probable transmembrane helix predicted for TA19170 by TMHMM2.0 at aa 7-29; Signal peptide predicted for TA19170 by SignalP 2.0 HMM (Signal peptide probability 0.901, signal anchor probability 0.078) with cleavage site probability 0.606 between residues 22 and 23
Signal peptide predicted for TA19170 by SignalP 2.0 HMM (Signal peptide probability 0.901, signal anchor probability 0.078) with cleavage site probability 0.606 between residues 22 and 23
1 probable transmembrane helix predicted for TA19170 by TMHMM2.0 at aa 7-29
TapCf04.q1c.C.cand.126 - score = 115.76; Signal anchor predicted for TA19115 by SignalP 2.0 HMM (Signal peptide probability 0.238, signal anchor probability 0.656) with cleavage site probability 0.195 between residues 28 and 29
Signal anchor predicted for TA19115 by SignalP 2.0 HMM (Signal peptide probability 0.238, signal anchor probability 0.656) with cleavage site probability 0.195 between residues 28 and 29
Theileria-specific sub-telomeric protein, SVSP family
Signal peptide predicted for TA19005 by SignalP 2.0 HMM (Signal peptide probability 0.751, signal anchor probability 0.000) with cleavage site probability 0.550 between residues 21 and 22
1 probable transmembrane helix predicted for TA18950 by TMHMM2.0 at aa 5-22
Signal peptide predicted for TA18885 by SignalP 2.0 HMM (Signal peptide probability 0.922, signal anchor probability 0.019) with cleavage site probability 0.757 between residues 21 and 22
Signal peptide predicted for TA18880 by SignalP 2.0 HMM (Signal peptide probability 0.662, signal anchor probability 0.001) with cleavage site probability 0.342 between residues 25 and 26
1 probable transmembrane helix predicted for TA18870 by TMHMM2.0 at aa 5-27; Signal anchor predicted for TA18870 by SignalP 2.0 HMM (Signal peptide probability 0.201, signal anchor probability 0.796) with cleavage site probability 0.081 between residues 25 and 26
1 probable transmembrane helix predicted for TA18870 by TMHMM2.0 at aa 5-27
Signal anchor predicted for TA18870 by SignalP 2.0 HMM (Signal peptide probability 0.201, signal anchor probability 0.796) with cleavage site probability 0.081 between residues 25 and 26
Proline-rich hypothetical protein; Signal peptide predicted for TA18865 by SignalP 2.0 HMM (Signal peptide probability 0.845, signal anchor probability 0.040) with cleavage site probability 0.798 between residues 21 and 22
Signal peptide predicted for TA18865 by SignalP 2.0 HMM (Signal peptide probability 0.845, signal anchor probability 0.040) with cleavage site probability 0.798 between residues 21 and 22
Signal peptide predicted for TA18860 by SignalP 2.0 HMM (Signal peptide probability 0.977, signal anchor probability 0.020) with cleavage site probability 0.594 between residues 21 and 22
Signal peptide predicted for TA18855 by SignalP 2.0 HMM (Signal peptide probability 0.841, signal anchor probability 0.001) with cleavage site probability 0.778 between residues 25 and 26