Theileria annulata chromosome 3, complete sequence, *** SEQUENCING IN PROGRESS ***.
Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Piroplasmida; Theileriidae; Theileria.
Genome of the host-cell transforming parasite Theileria annulata compared with T. parva
Submitted (29-JAN-2021) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA
Submitted (31-MAR-2005) The Wellcome Trust Sanger Institute Genome Campus, Hinxton, Cambridge CB10 1SA, UK
PROVISIONAL REFSEQ: This record has not yet been subject to final\nNCBI review. The reference sequence is identical to CR940352.\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: INSDC submitter\nAnnotation Status :: Full annotation\nAnnotation Pipeline :: Eukaryotic Annotation Propagation Pipeline\n##Genome-Annotation-Data-END##\n* NOTE: This is a 'working draft' sequence. It currently\n* consists of 1 contigs. Gaps between the contigs\n* are represented as runs of N. The order of the pieces\n* is believed to be correct as given, however the sizes\n* of the gaps between them are based on estimates that have\n* provided by the submitter.\n* This sequence will be replaced\n* by the finished sequence as soon as it is available and\n* the accession number will be preserved.\n* 1 1898942: contig of 1898942 bp in length.
SfiI-subtelomeric fragment related protein family member, putative
TapBAC24e05.p1k.cand.4 - score = 10.34; SMART 1 transmembrane domain at aa 5-27; 1 probable transmembrane helix predicted for TA17560 by TMHMM2.0 at aa 5-27; Signal anchor predicted for TA17560 by SignalP 2.0 HMM (Signal peptide probability 0.319, signal anchor probability 0.674) with cleavage site probability 0.117 between residues 25 and 26
1 probable transmembrane helix predicted for TA17560 by TMHMM2.0 at aa 5-27
Signal anchor predicted for TA17560 by SignalP 2.0 HMM (Signal peptide probability 0.319, signal anchor probability 0.674) with cleavage site probability 0.117 between residues 25 and 26
Theileria-specific sub-telomeric protein, SVSP family, putative
TapBAC24e05.p1k.C.cand.2 - score = 35.12; SMART 1 transmembrane domain at aa 13-30; 1 probable transmembrane helix predicted for TA17555 by TMHMM2.0 at aa 13-30; Signal anchor predicted for TA17555 by SignalP 2.0 HMM (Signal peptide probability 0.004, signal anchor probability 0.714) with cleavage site probability 0.004 between residues 30 and 31
Signal anchor predicted for TA17555 by SignalP 2.0 HMM (Signal peptide probability 0.004, signal anchor probability 0.714) with cleavage site probability 0.004 between residues 30 and 31
1 probable transmembrane helix predicted for TA17555 by TMHMM2.0 at aa 13-30
TapBAC24e05.p1k.C.cand.3 - score = 27.84; Signal peptide predicted for TA17550 by SignalP 2.0 HMM (Signal peptide probability 0.981, signal anchor probability 0.017) with cleavage site probability 0.579 between residues 21 and 22
Signal peptide predicted for TA17550 by SignalP 2.0 HMM (Signal peptide probability 0.981, signal anchor probability 0.017) with cleavage site probability 0.579 between residues 21 and 22
note; TapBAC24e05.p1k.cand.3 - score = 20.67; Signal peptide predicted for TA17545 by SignalP 2.0 HMM (Signal peptide probability 0.891, signal anchor probability 0.087) with cleavage site probability 0.866 between residues 20 and 21
Signal peptide predicted for TA17545 by SignalP 2.0 HMM (Signal peptide probability 0.891, signal anchor probability 0.087) with cleavage site probability 0.866 between residues 20 and 21
note; TapBAC24e05.p1k.cand.2 - score = 24.02; Signal peptide predicted for TA17540 by SignalP 2.0 HMM (Signal peptide probability 0.965, signal anchor probability 0.019) with cleavage site probability 0.925 between residues 20 and 21
Signal peptide predicted for TA17540 by SignalP 2.0 HMM (Signal peptide probability 0.965, signal anchor probability 0.019) with cleavage site probability 0.925 between residues 20 and 21
TapBAC24e05.p1k.cand.1 - score = 29.29; Signal peptide predicted for TA17535 by SignalP 2.0 HMM (Signal peptide probability 0.951, signal anchor probability 0.026) with cleavage site probability 0.914 between residues 20 and 21
Signal peptide predicted for TA17535 by SignalP 2.0 HMM (Signal peptide probability 0.951, signal anchor probability 0.026) with cleavage site probability 0.914 between residues 20 and 21
Tap-140g05.q1c.cand.33 - score = 28.44; Signal peptide predicted for TA02740 by SignalP 2.0 HMM (Signal peptide probability 0.965, signal anchor probability 0.019) with cleavage site probability 0.925 between residues 20 and 21
Signal peptide predicted for TA02740 by SignalP 2.0 HMM (Signal peptide probability 0.965, signal anchor probability 0.019) with cleavage site probability 0.925 between residues 20 and 21
note; Tap-140g05.q1c.cand.30 - score = 53.79; 1 probable transmembrane helix predicted for TA02725 by TMHMM2.0 at aa 7-29; Signal peptide predicted for TA02725 by SignalP 2.0 HMM (Signal peptide probability 0.846, signal anchor probability 0.115) with cleavage site probability 0.569 between residues 22 and 23
1 probable transmembrane helix predicted for TA02725 by TMHMM2.0 at aa 7-29
Signal peptide predicted for TA02725 by SignalP 2.0 HMM (Signal peptide probability 0.846, signal anchor probability 0.115) with cleavage site probability 0.569 between residues 22 and 23
note; Tap-140g05.q1c.cand.28 - score = 52.92; 1 probable transmembrane helix predicted for TA02715 by TMHMM2.0 at aa 5-27; Signal peptide predicted for TA02715 by SignalP 2.0 HMM (Signal peptide probability 0.937, signal anchor probability 0.063) with cleavage site probability 0.452 between residues 21 and 22
1 probable transmembrane helix predicted for TA02715 by TMHMM2.0 at aa 5-27
Signal peptide predicted for TA02715 by SignalP 2.0 HMM (Signal peptide probability 0.937, signal anchor probability 0.063) with cleavage site probability 0.452 between residues 21 and 22
note; Tap-140g05.q1c.cand.27 - score = 14.52; 1 probable transmembrane helix predicted for TA02710 by TMHMM2.0 at aa 7-29; Signal anchor predicted for TA02710 by SignalP 2.0 HMM (Signal peptide probability 0.295, signal anchor probability 0.686) with cleavage site probability 0.216 between residues 20 and 21
1 probable transmembrane helix predicted for TA02710 by TMHMM2.0 at aa 7-29
Signal anchor predicted for TA02710 by SignalP 2.0 HMM (Signal peptide probability 0.295, signal anchor probability 0.686) with cleavage site probability 0.216 between residues 20 and 21
note; Tap-140g05.q1c.cand.25 - score = 36.59; SMART pfam:Ribosomal_L15 (PF01305) at aa 264-369, E()=1.40e-21; Signal peptide predicted for TA02700 by SignalP 2.0 HMM (Signal peptide probability 0.646, signal anchor probability 0.022) with cleavage site probability 0.573 between residues 16 and 17
Signal peptide predicted for TA02700 by SignalP 2.0 HMM (Signal peptide probability 0.646, signal anchor probability 0.022) with cleavage site probability 0.573 between residues 16 and 17
SMART 1 transmembrane domain at aa 13-35; pfam:Ribosomal_L17 (PF01196) at aa 64-162, E()=7.10e-15; 1 probable transmembrane helix predicted for TA02695 by TMHMM2.0 at aa 13-35
1 probable transmembrane helix predicted for TA02695 by TMHMM2.0 at aa 13-35
chromodomain protein (HP1-like), putative
methyltransferase (HUSSY homologue), putative
note; Tap-140g05.q1c.C.cand.4 - score = 22.84; SMART methyltransferase domains
note; Tap-140g05.q1c.C.cand.5 - score = 18.17
ubiquitin-conjugating enzyme (MMS homologue), putative
RNA polymerase II carboxyterminal domain (CTD) phosphatase, putative
DNA-directed RNA polymerase II, putative
note; Tap-140g05.q1c.C.cand.6 - score = 7.66; SMART pfam:RNA_pol_L (PF01193) at aa 24-114, E()=2.90e-11; 1 probable transmembrane helix predicted for TA02635 by TMHMM2.0 at aa 104-123
1 probable transmembrane helix predicted for TA02635 by TMHMM2.0 at aa 104-123
note; Tap-140g05.q1c.C.cand.7 - score = 68.68
note; Tap-140g05.q1c.C.cand.8 - score = 16.55; Signal peptide predicted for TA02620 by SignalP 2.0 HMM (Signal peptide probability 0.966, signal anchor probability 0.000) with cleavage site probability 0.769 between residues 16 and 17
Signal peptide predicted for TA02620 by SignalP 2.0 HMM (Signal peptide probability 0.966, signal anchor probability 0.000) with cleavage site probability 0.769 between residues 16 and 17
note; Tap-140g05.q1c.C.cand.9 - score = 9.03
vacuolar ATP synthase subunit h, putative
note; Tap-140g05.q1c.cand.13 - score = 28.84; Signal peptide predicted for TA02590 by SignalP 2.0 HMM (Signal peptide probability 0.959, signal anchor probability 0.000) with cleavage site probability 0.721 between residues 18 and 19; GPI-Anchor Signal predicted for TA02590 by DGPI v2.04 with cleavage site probability 0.172 near 339
GPI-Anchor Signal predicted for TA02590 by DGPI v2.04 with cleavage site probability 0.172 near 339
Signal peptide predicted for TA02590 by SignalP 2.0 HMM (Signal peptide probability 0.959, signal anchor probability 0.000) with cleavage site probability 0.721 between residues 18 and 19
note; Tap-140g05.q1c.cand.12 - score = 16.66; Signal peptide predicted for TA02585 by SignalP 2.0 HMM (Signal peptide probability 0.959, signal anchor probability 0.000) with cleavage site probability 0.721 between residues 18 and 19; GPI-Anchor Signal predicted for TA02585 by DGPI v2.04 with cleavage site probability 0.49879998 near 157
GPI-Anchor Signal predicted for TA02585 by DGPI v2.04 with cleavage site probability 0.49879998 near 157
Signal peptide predicted for TA02585 by SignalP 2.0 HMM (Signal peptide probability 0.959, signal anchor probability 0.000) with cleavage site probability 0.721 between residues 18 and 19
note; Tap-140g05.q1c.cand.11 - score = 26.39; Signal peptide predicted for TA02580 by SignalP 2.0 HMM (Signal peptide probability 0.996, signal anchor probability 0.000) with cleavage site probability 0.824 between residues 19 and 20; GPI-Anchor Signal predicted for TA02580 by DGPI v2.04, no cleavage site predicted
Signal peptide predicted for TA02580 by SignalP 2.0 HMM (Signal peptide probability 0.996, signal anchor probability 0.000) with cleavage site probability 0.824 between residues 19 and 20
transport protein (SEC13 homologue), putative
note; Tap-140g05.q1c.C.cand.12 - score = 20.62; SMART 4 transmembrane domains at aa 265-287, 302-324, 358-376 and 391-413; 4 probable transmembrane helices predicted for TA02560 by TMHMM2.0 at aa 265-287, 302-324, 358-376 and 391-413
4 probable transmembrane helices predicted for TA02560 by TMHMM2.0 at aa 265-287, 302-324, 358-376 and 391-413
26S proteasome regulatory subunit, putative
carbamoyl phosphate synthase II, putative
note; Tap-140g05.q1c.cand.7 - score = 15.68
SMART pfam:Ribosomal_S27e (PF01667) at aa 26-80, E()=6.30e-26
note; Tap-140g05.q1c.cand.6 - score = 25.76
note; Tap-140g05.q1c.cand.5 - score = 43.61
Tap-140g05.q1c.cand.5 - score = 43.61; SMART pfam:asp (PF00026) at aa 89-485, E()=1.50e-66; 1 probable transmembrane helix predicted for TA02510 by TMHMM2.0 at aa 5-27; Signal peptide predicted for TA02510 by SignalP 2.0 HMM (Signal peptide probability 0.650, signal anchor probability 0.310) with cleavage site probability 0.488 between residues 25 and 26
1 probable transmembrane helix predicted for TA02510 by TMHMM2.0 at aa 5-27
Signal peptide predicted for TA02510 by SignalP 2.0 HMM (Signal peptide probability 0.650, signal anchor probability 0.310) with cleavage site probability 0.488 between residues 25 and 26
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, putative
note; Tap-140g05.q1c.C.cand.17 - score = 21.11; 1 probable transmembrane helix predicted for TA02505 by TMHMM2.0 at aa 7-29
1 probable transmembrane helix predicted for TA02505 by TMHMM2.0 at aa 7-29
ribosome biogenesis protein (BMS1 homologue), putative
hexose transporter (HT1 homologue), putative
note; Tap-140g05.q1c.cand.2 - score = 18.79; SMART pfam:sugar_tr (PF00083) at aa 12-472, E()=4.60e-62; 12 probable transmembrane helices predicted for TA02485 by TMHMM2.0 at aa 7-29, 58-80, 92-114, 119-138, 145-167, 193-215, 278-300, 315-337, 344-362, 377-399, 412-434 and 438-460; Signal peptide predicted for TA02485 by SignalP 2.0 HMM (Signal peptide probability 0.974, signal anchor probability 0.022) with cleavage site probability 0.648 between residues 28 and 29
Signal peptide predicted for TA02485 by SignalP 2.0 HMM (Signal peptide probability 0.974, signal anchor probability 0.022) with cleavage site probability 0.648 between residues 28 and 29
note; Tap-140g05.q1c.cand.1 - score = 21.12; SMART pfam:sugar_tr (PF00083) at aa 12-472, E()=1.10e-59; 12 probable transmembrane helices predicted for TA02480 by TMHMM2.0 at aa 13-32, 58-80, 92-114, 119-138, 145-167, 193-215, 278-300, 315-337, 344-362, 377-399, 412-434 and 438-460; Signal peptide predicted for TA02480 by SignalP 2.0 HMM (Signal peptide probability 0.831, signal anchor probability 0.147) with cleavage site probability 0.375 between residues 28 and 29
Signal peptide predicted for TA02480 by SignalP 2.0 HMM (Signal peptide probability 0.831, signal anchor probability 0.147) with cleavage site probability 0.375 between residues 28 and 29
6 probable transmembrane helices predicted for TA03170 by TMHMM2.0 at aa 80-102, 117-137, 144-166, 202-224, 330-352 and 362-379
note; Tap-24g11.q1c.C.cand.235 - score = 58.41; Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal peptide predicted for TA03175 by SignalP 2.0 HMM (Signal peptide probability 0.982, signal anchor probability 0.000) with cleavage site probability 0.529 between residues 19 and 20
Signal peptide predicted for TA03175 by SignalP 2.0 HMM (Signal peptide probability 0.982, signal anchor probability 0.000) with cleavage site probability 0.529 between residues 19 and 20
note; Tap-24g11.q1c.cand.2 - score = 40.16
note; Tap-24g11.q1c.cand.3 - score = 13.88; 1 probable transmembrane helix predicted for TA03185 by TMHMM2.0 at aa 76-93
1 probable transmembrane helix predicted for TA03185 by TMHMM2.0 at aa 76-93
note; Tap-24g11.q1c.cand.4 - score = 13.32
note; Tap-24g11.q1c.cand.5 - score = 23.14
Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal peptide predicted for TA03200 by SignalP 2.0 HMM (Signal peptide probabilty 0.974, signal anchor probability 0.000) with cleavage site probability 0.596 between residues 16 and 17
note; Signal peptide predicted for TA03210 by SignalP 2.0 HMM (Signal peptide probability 0.999, signal anchor probability 0.000) with cleavage site probability 0.988 between residues 17 and 18
Signal peptide predicted for TA03210 by SignalP 2.0 HMM (Signal peptide probability 0.999, signal anchor probability 0.000) with cleavage site probability 0.988 between residues 17 and 18
extensin (proline-rich protein), putative
note; Tap-24g11.q1c.cand.9 - score = 18.68
note; Tap-24g11.q1c.C.cand.229 - score = 13.66; Signal peptide predicted for TA03540 by SignalP 2.0 HMM (Signal peptide probability 1.000, signal anchor probability 0.000) with cleavage site probability 0.953 between residues 17 and 18
Signal peptide predicted for TA03540 by SignalP 2.0 HMM (Signal peptide probability 1.000, signal anchor probability 0.000) with cleavage site probability 0.953 between residues 17 and 18
note; Tap-24g11.q1c.cand.11 - score = 19.71
note; Tap-24g11.q1c.cand.12 - score = 40.59
note; Tap-24g11.q1c.cand.13 - score = 18.25
note; Tap-24g11.q1c.cand.14 - score = 9.29; 1 probable transmembrane helix predicted for TA03875 by TMHMM2.0 at aa 153-175
1 probable transmembrane helix predicted for TA03875 by TMHMM2.0 at aa 153-175
note; Tap-24g11.q1c.cand.15 - score = 17.09
note; Tap-24g11.q1c.cand.16 - score = 10.29
note; Tap-24g11.q1c.C.cand.225 - score = 69.25; 3 probable transmembrane helices predicted for TA04090 by TMHMM2.0 at aa 7-25, 528-550 and 563-585
3 probable transmembrane helices predicted for TA04090 by TMHMM2.0 at aa 7-25, 528-550 and 563-585
note; Tap-24g11.q1c.C.cand.225 - score = 69.25; 0506. Phat adopted as slightly better fasta results
note; Tap-24g11.q1c.cand.17 - score = 14.96
note; Tap-24g11.q1c.cand.19 - score = 8.55
4-methyl-5(b-hydroxyethyl)-thiazol monophosphate biosynthesis enzyme, putative
note; Tap-24g11.q1c.C.cand.224 - score = 6.85
note; Tap-24g11.q1c.cand.22 - score = 34.00
note; Tap-24g11.q1c.cand.23 - score = 6.87
Tpr-related protein family member, putative
note; Tap-24g11.q1c.cand.27 - score = 12.87
note; Tap-24g11.q1c.C.cand.216 - score = 30.30; 11 probable transmembrane helices predicted for TA05135 by TMHMM2.0 at aa 32-51, 66-88, 116-138, 142-164, 185-207, 217-236, 289-311, 326-348, 361-383, 387-409 and 626-648; GPI-Anchor Signal predicted for TA05135 by DGPI v2.04, no cleavage site predicted
note; Tap-24g11.q1c.cand.29 - score = 11.70
note; Tap-24g11.q1c.cand.30 - score = 37.26; 2 probable transmembrane helices predicted for TA05195 by TMHMM2.0 at aa 76-98 and 701-723
2 probable transmembrane helices predicted for TA05195 by TMHMM2.0 at aa 76-98 and 701-723
note; Tap-24g11.q1c.C.cand.214 - score = 39.09; 1 probable transmembrane helix predicted for TA05265 by TMHMM2.0 at aa 139-161
1 probable transmembrane helix predicted for TA05265 by TMHMM2.0 at aa 139-161
note; Tap-24g11.q1c.cand.31 - score = 28.53
2-oxoglutarate dehydrogenase E1 component, putative
note; Tap-24g11.q1c.C.cand.212 - score = 10.81; 4 probable transmembrane helices predicted for TA05280 by TMHMM2.0 at aa 21-43, 53-75, 82-104 and 124-146
4 probable transmembrane helices predicted for TA05280 by TMHMM2.0 at aa 21-43, 53-75, 82-104 and 124-146
note; Tap-24g11.q1c.cand.32 - score = 22.69
There is small overlap at the 3' end with gene TA05295; 1 probable transmembrane helix predicted for TA05290 by TMHMM2.0 at aa 143-165
1 probable transmembrane helix predicted for TA05290 by TMHMM2.0 at aa 143-165
global transcription activator, SNF2 family member, putative
There is small overlap at the 3' end with gene TA05290
polyphosphoinositol binding protein, putative
note; Tap-24g11.q1c.cand.35 - score = 12.42; Signal peptide predicted for TA05315 by SignalP 2.0 HMM (Signal peptide probability 0.992, signal anchor probability 0.000) with cleavage site probability 0.427 between residues 19 and 20; GPI-Anchor Signal predicted for TA05315 by DGPI v2.04, no cleavage site predicted
Signal peptide predicted for TA05315 by SignalP 2.0 HMM (Signal peptide probability 0.992, signal anchor probability 0.000) with cleavage site probability 0.427 between residues 19 and 20
note; Tap-24g11.q1c.cand.36 - score = 24.03; Signal peptide predicted for TA05320 by SignalP 2.0 HMM (Signal peptide probability 0.994, signal anchor probability 0.000) with cleavage site probability 0.689 between residues 18 and 19; GPI-Anchor Signal predicted for TA05320 by DGPI v2.04 with cleavage site probability 0.74819994 near 169
Signal peptide predicted for TA05320 by SignalP 2.0 HMM (Signal peptide probability 0.994, signal anchor probability 0.000) with cleavage site probability 0.689 between residues 18 and 19
GPI-Anchor Signal predicted for TA05320 by DGPI v2.04 with cleavage site probability 0.74819994 near 169
note; Tap-24g11.q1c.cand.37 - score = 67.43
note; Tap-24g11.q1c.cand.38 - score = 55.84
note; Tap-24g11.q1c.cand.39 - score = 41.27
note; Tap-24g11.q1c.cand.40 - score = 18.77
note; Tap-24g11.q1c.cand.41 - score = 32.51
note; Tap-24g11.q1c.cand.43 - score = 22.11
note; Tap-24g11.q1c.cand.45 - score = 90.92; Signal peptide predicted for TA05375 by SignalP 2.0 HMM (Signal peptide probability 0.987, signal anchor probability 0.000) with cleavage site probability 0.866 between residues 21 and 22
Signal peptide predicted for TA05375 by SignalP 2.0 HMM (Signal peptide probability 0.987, signal anchor probability 0.000) with cleavage site probability 0.866 between residues 21 and 22
note; Tap-24g11.q1c.cand.46 - score = 35.59
note; Tap-24g11.q1c.cand.47 - score = 13.69
note; Tap-24g11.q1c.cand.48 - score = 17.12; 1 probable transmembrane helix predicted for TA05390 by TMHMM2.0 at aa 2-21; Signal peptide predicted for TA05390 by SignalP 2.0 HMM (Signal peptide probability 0.895, signal anchor probability 0.009) with cleavage site probability 0.447 between residues 21 and 22
Signal peptide predicted for TA05390 by SignalP 2.0 HMM (Signal peptide probability 0.895, signal anchor probability 0.009) with cleavage site probability 0.447 between residues 21 and 22
1 probable transmembrane helix predicted for TA05390 by TMHMM2.0 at aa 2-21
note; Tap-24g11.q1c.cand.49 - score = 12.61
note; Tap-24g11.q1c.cand.50 - score = 63.99; 3 probable transmembrane helices predicted for TA05400 by TMHMM2.0 at aa 649-668, 689-711 and 726-748
3 probable transmembrane helices predicted for TA05400 by TMHMM2.0 at aa 649-668, 689-711 and 726-748
note; Tap-24g11.q1c.cand.51 - score = 12.73; 1 probable transmembrane helix predicted for TA05405 by TMHMM2.0 at aa 156-178
1 probable transmembrane helix predicted for TA05405 by TMHMM2.0 at aa 156-178
note; Tap-24g11.q1c.cand.52 - score = 16.09; 6 probable transmembrane helices predicted for TA05415 by TMHMM2.0 at aa 184-206, 211-229, 249-271, 284-306, 327-349 and 359-378
6 probable transmembrane helices predicted for TA05415 by TMHMM2.0 at aa 184-206, 211-229, 249-271, 284-306, 327-349 and 359-378
note; Tap-24g11.q1c.cand.53 - score = 23.52
note; Tap-24g11.q1c.C.cand.203 - score = 35.28; Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal peptide predicted for TA05440 by SignalP 2.0 HMM (Signal peptide probability 0.939, signal anchor probability 0.035) with cleavage site probability 0.577 between residues 26 and 27
Signal peptide predicted for TA05440 by SignalP 2.0 HMM (Signal peptide probability 0.939, signal anchor probability 0.035) with cleavage site probability 0.577 between residues 26 and 27
note; Tap-24g11.q1c.cand.54 - score = 12.13
nuclear-architecture-related protein (NARF) or Fe-hydrogenase, putative
note; Tap-24g11.q1c.cand.56 - score = 10.66
note; Tap-24g11.q1c.cand.57 - score = 172.47; 3 probable transmembrane helices predicted for TA05465 by TMHMM2.0 at aa 144-166, 229-251 and 2538-2555
3 probable transmembrane helices predicted for TA05465 by TMHMM2.0 at aa 144-166, 229-251 and 2538-2555
note; Tap-24g11.q1c.cand.58 - score = 18.59
note; Tap-24g11.q1c.cand.60 - score = 57.35
note; Tap-24g11.q1c.cand.61 - score = 32.80; 2 probable transmembrane helices predicted for TA05495 by TMHMM2.0 at aa 5-27 and 241-260; Signal peptide predicted for TA05495 by SignalP 2.0 HMM (Signal peptide probability 0.946, signal anchor probability 0.000) with cleavage site probability 0.559 between residues 24 and 25
Signal peptide predicted for TA05495 by SignalP 2.0 HMM (Signal peptide probability 0.946, signal anchor probability 0.000) with cleavage site probability 0.559 between residues 24 and 25
2 probable transmembrane helices predicted for TA05495 by TMHMM2.0 at aa 5-27 and 241-260
adenylyl-cyclase-associated protein, putative
note; Tap-24g11.q1c.cand.62 - score = 10.83
note; Tap-24g11.q1c.C.cand.198 - score = 16.12; 1 probable transmembrane helix predicted for TA05505 by TMHMM2.0 at aa 60-82
1 probable transmembrane helix predicted for TA05505 by TMHMM2.0 at aa 60-82
note; Tap-24g11.q1c.C.cand.197 - score = 21.66; Apicoplast targetting peptide predicted by the PlasmoAP tool; 1 probable transmembrane helix predicted for TA05510 by TMHMM2.0 at aa 7-29; Signal peptide predicted for TA05510 by SignalP 2.0 HMM (Signal peptide probability 0.941, signal anchor probability 0.011) with cleavage site probability 0.372 between residues 25 and 26
1 probable transmembrane helix predicted for TA05510 by TMHMM2.0 at aa 7-29
Signal peptide predicted for TA05510 by SignalP 2.0 HMM (Signal peptide probability 0.941, signal anchor probability 0.011) with cleavage site probability 0.372 between residues 25 and 26
note; Tap-24g11.q1c.C.cand.195 - score = 62.36; 1 probable transmembrane helix predicted for TA03215 by TMHMM2.0 at aa 744-766
1 probable transmembrane helix predicted for TA03215 by TMHMM2.0 at aa 744-766
note; Tap-24g11.q1c.C.cand.192 - score = 37.16; 2 probable transmembrane helices predicted for TA03230 by TMHMM2.0 at aa 99-121 and 386-408
2 probable transmembrane helices predicted for TA03230 by TMHMM2.0 at aa 99-121 and 386-408
DNA-directed RNA polymerase II largest subunit, putative
note; Tap-24g11.q1c.C.cand.189 - score = 9.86
note; Tap-24g11.q1c.cand.64 - score = 10.22
note; Tap-24g11.q1c.cand.65 - score = 16.00
plastid 50S ribosomal protein L21 or ribosomal protein L21, putative
note; Tap-24g11.q1c.cand.66 - score = 53.31
note; Tap-24g11.q1c.C.cand.185 - score = 42.57; Signal peptide predicted for TA03300 by SignalP 2.0 HMM (Signal peptide probability 0.991, signal anchor probability 0.000) with cleavage site probability 0.552 between residues 19 and 20
Signal peptide predicted for TA03300 by SignalP 2.0 HMM (Signal peptide probability 0.991, signal anchor probability 0.000) with cleavage site probability 0.552 between residues 19 and 20
note; Tap-24g11.q1c.C.cand.184 - score = 45.48; Signal peptide predicted for TA03305 by SignalP 2.0 HMM (Signal peptide probability 0.997, signal anchor probability 0.000) with cleavage site probability 0.930 between residues 16 and 17
Signal peptide predicted for TA03305 by SignalP 2.0 HMM (Signal peptide probability 0.997, signal anchor probability 0.000) with cleavage site probability 0.930 between residues 16 and 17
DNA-directed RNA polymerase D subunit, putative
note; Tap-24g11.q1c.cand.67 - score = 33.61; Apicoplast targetting peptide predicted by the PlasmoAP tool; 1 probable transmembrane helix predicted for TA03310 by TMHMM2.0 at aa 2-21; Signal peptide predicted for TA03310 by SignalP 2.0 HMM (Signal peptide probability 0.821, signal anchor probability 0.038) with cleavage site probability 0.499 between residues 22 and 23
Signal peptide predicted for TA03310 by SignalP 2.0 HMM (Signal peptide probability 0.821, signal anchor probability 0.038) with cleavage site probability 0.499 between residues 22 and 23
1 probable transmembrane helix predicted for TA03310 by TMHMM2.0 at aa 2-21
note; Tap-24g11.q1c.C.cand.181 - score = 9.76
DNA polymerase alpha, catalytic subunit, putative
note; 1 probable transmembrane helix predicted for TA03335 by TMHMM2.0 at aa 865-887
1 probable transmembrane helix predicted for TA03335 by TMHMM2.0 at aa 865-887
note; Tap-24g11.q1c.cand.68 - score = 29.50; 1 probable transmembrane helix predicted for TA03340 by TMHMM2.0 at aa 44-66
1 probable transmembrane helix predicted for TA03340 by TMHMM2.0 at aa 44-66
Apicoplast targetting peptide predicted by the PlasmoAP tool; 1 probable transmembrane helix predicted for TA03350 by TMHMM2.0 at aa 7-29; Signal peptide predicted for TA03350 by SignalP 2.0 HMM (Signal peptide probability 0.830, signal anchor probability 0.121) with cleavage site probability 0.613 between residues 19 and 20
Signal peptide predicted for TA03350 by SignalP 2.0 HMM (Signal peptide probability 0.830, signal anchor probability 0.121) with cleavage site probability 0.613 between residues 19 and 20
1 probable transmembrane helix predicted for TA03350 by TMHMM2.0 at aa 7-29
note; Tap-24g11.q1c.cand.70 - score = 19.59; 1 probable transmembrane helix predicted for TA03365 by TMHMM2.0 at aa 264-286
1 probable transmembrane helix predicted for TA03365 by TMHMM2.0 at aa 264-286
note; Tap-24g11.q1c.cand.72 - score = 22.13
note; Tap-24g11.q1c.cand.74 - score = 18.41
inosine-5'-monophosphate dehydrogenase, putative
peptidylprolyl isomerase (cyclophilin), putative
note; Tap-24g11.q1c.cand.75 - score = 14.33
sulfur metabolism negative regulator, putative
note; Tap-24g11.q1c.C.cand.170 - score = 8.24
(dihydrolipoamide) dehydrogenase precursor, putative
note; Tap-24g11.q1c.cand.78 - score = 7.76
succinate dehydrogenase (flavoprotein) subunit, putative
RNA 3'-terminal phosphate cyclase like-protein, putative
note; Tap-24g11.q1c.cand.79 - score = 29.97
tubulin gamma-chain (gamma-tubulin), putative
note; Tap-24g11.q1c.C.cand.165 - score = 29.48; Signal peptide predicted for TA03475 by SignalP 2.0 HMM (Signal peptide probability 0.997, signal anchor probability 0.000) with cleavage site probability 0.976 between residues 19 and 20
Signal peptide predicted for TA03475 by SignalP 2.0 HMM (Signal peptide probability 0.997, signal anchor probability 0.000) with cleavage site probability 0.976 between residues 19 and 20
note; Tap-24g11.q1c.C.cand.164 - score = 40.32; 5 probable transmembrane helices predicted for TA03480 by TMHMM2.0 at aa 115-137, 167-189, 196-218, 233-250 and 255-277
5 probable transmembrane helices predicted for TA03480 by TMHMM2.0 at aa 115-137, 167-189, 196-218, 233-250 and 255-277
DNA replication licensing factor (MCM7 homolog), putative
note; Tap-24g11.q1c.C.cand.163 - score = 9.48
note; Tap-24g11.q1c.C.cand.162 - score = 133.02; 2 probable transmembrane helices predicted for TA03495 by TMHMM2.0 at aa 309-328 and 335-357
2 probable transmembrane helices predicted for TA03495 by TMHMM2.0 at aa 309-328 and 335-357
note; Tap-24g11.q1c.cand.83 - score = 30.43
note; Tap-24g11.q1c.cand.84 - score = 35.41
Theileria-specific hypothetical telomeric sfii fragment-related protein, putative
note; Tap-24g11.q1c.cand.85 - score = 16.47; Apicoplast targetting peptide predicted by the PlasmoAP tool; 10 probable transmembrane helices predicted for TA03530 by TMHMM2.0 at aa 4-26, 146-163, 178-200, 306-325, 329-351, 385-407, 510-529, 549-571, 576-598 and 611-633; Signal peptide predicted for TA03530 by SignalP 2.0 HMM (Signal peptide probability 0.998, signal anchor probability 0.000) with cleavage site probability 0.792 between residues 23 and 24
Signal peptide predicted for TA03530 by SignalP 2.0 HMM (Signal peptide probability 0.998, signal anchor probability 0.000) with cleavage site probability 0.792 between residues 23 and 24
note; Tap-24g11.q1c.C.cand.156 - score = 68.47; Signal peptide predicted for TA03545 by SignalP 2.0 HMM (Signal peptide probability 0.961, signal anchor probability 0.000) with cleavage site probability 0.665 between residues 16 and 17
Signal peptide predicted for TA03545 by SignalP 2.0 HMM (Signal peptide probability 0.961, signal anchor probability 0.000) with cleavage site probability 0.665 between residues 16 and 17
note; Tap-24g11.q1c.cand.86 - score = 30.40
note; Tap-24g11.q1c.cand.87 - score = 32.00
note; Tap-24g11.q1c.cand.88 - score = 27.83
note; Tap-24g11.q1c.C.cand.150 - score = 26.94; 12 probable transmembrane helices predicted for TA03590 by TMHMM2.0 at aa 29-51, 64-86, 96-113, 155-177, 192-214, 249-271, 365-384, 410-432, 452-474, 487-506, 526-548 and 569-591; Signal anchor predicted for TA03590 by SignalP 2.0 HMM (Signal peptide probability 0.005, signal anchor probability 0.659) with cleavage site probability 0.004 between residues 40 and 41
Signal anchor predicted for TA03590 by SignalP 2.0 HMM (Signal peptide probability 0.005, signal anchor probability 0.659) with cleavage site probability 0.004 between residues 40 and 41
Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal peptide predicted for TA03600 by SignalP 2.0 HMM (Signal peptide probability 0.699, signal anchor probability 0.000) with cleavage site probability 0.599 between residues 18 and 19
Signal peptide predicted for TA03600 by SignalP 2.0 HMM (Signal peptide probability 0.699, signal anchor probability 0.000) with cleavage site probability 0.599 between residues 18 and 19
note; Tap-24g11.q1c.cand.90 - score = 32.68; 2 probable transmembrane helices predicted for TA03610 by TMHMM2.0 at aa 228-250 and 255-277
2 probable transmembrane helices predicted for TA03610 by TMHMM2.0 at aa 228-250 and 255-277
note; Tap-24g11.q1c.cand.91 - score = 41.88; Signal peptide predicted for TA03615 by SignalP 2.0 HMM (Signal peptide probability 0.997, signal anchor probability 0.000) with cleavage site probability 0.906 between residues 18 and 19
Signal peptide predicted for TA03615 by SignalP 2.0 HMM (Signal peptide probability 0.997, signal anchor probability 0.000) with cleavage site probability 0.906 between residues 18 and 19
note; Tap-24g11.q1c.C.cand.148 - score = 21.07; 2 probable transmembrane helices predicted for TA03620 by TMHMM2.0 at aa 287-309 and 339-361; Signal peptide predicted for TA03620 by SignalP 2.0 HMM (Signal peptide probability 0.997, signal anchor probability 0.001) with cleavage site probability 0.580 between residues 21 and 22
2 probable transmembrane helices predicted for TA03620 by TMHMM2.0 at aa 287-309 and 339-361
Signal peptide predicted for TA03620 by SignalP 2.0 HMM (Signal peptide probability 0.997, signal anchor probability 0.001) with cleavage site probability 0.580 between residues 21 and 22
note; Tap-24g11.q1c.cand.92 - score = 36.22
note; Tap-24g11.q1c.C.cand.145 - score = 72.33; Signal peptide predicted for TA03640 by SignalP 2.0 HMM (Signal peptide probability 0.997, signal anchor probability 0.000) with cleavage site probability 0.649 between residues 19 and 20; GPI-Anchor Signal predicted for TA03640 by DGPI v2.04, no cleavage site predicted
Signal peptide predicted for TA03640 by SignalP 2.0 HMM (Signal peptide probability 0.997, signal anchor probability 0.000) with cleavage site probability 0.649 between residues 19 and 20
note; Tap-24g11.q1c.cand.93 - score = 47.65
note; Tap-24g11.q1c.cand.94 - score = 7.10
note; Tap-24g11.q1c.cand.95 - score = 11.38; Signal peptide predicted for TA03670 by SignalP 2.0 HMM (Signal peptide probability 0.613, signal anchor probability 0.000) with cleavage site probability 0.273 between residues 20 and 21
Signal peptide predicted for TA03670 by SignalP 2.0 HMM (Signal peptide probability 0.613, signal anchor probability 0.000) with cleavage site probability 0.273 between residues 20 and 21
note; Tap-24g11.q1c.C.cand.141 - score = 13.71; Signal peptide predicted for TA03680 by SignalP 2.0 HMM (Signal peptide probability 0.968, signal anchor probability 0.005) with cleavage site probability 0.453 between residues 22 and 23
Signal peptide predicted for TA03680 by SignalP 2.0 HMM (Signal peptide probability 0.968, signal anchor probability 0.005) with cleavage site probability 0.453 between residues 22 and 23
note; Tap-24g11.q1c.cand.96 - score = 18.70
note; Tap-24g11.q1c.C.cand.139 - score = 22.80; 1 probable transmembrane helix predicted for TA03695 by TMHMM2.0 at aa 13-32
1 probable transmembrane helix predicted for TA03695 by TMHMM2.0 at aa 13-32
note; Tap-24g11.q1c.cand.97 - score = 43.71
cysteine proteinase precursor, tacP, putative
note; Tap-24g11.q1c.cand.98 - score = 35.21; 1 probable transmembrane helix predicted for TA03720 by TMHMM2.0 at aa 47-69; Signal anchor predicted for TA03720 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 0.999) with cleavage site probability 0.000 between residues -1 and 0
1 probable transmembrane helix predicted for TA03720 by TMHMM2.0 at aa 47-69
note; Tap-24g11.q1c.cand.99 - score = 34.22; 1 probable transmembrane helix predicted for TA03725 by TMHMM2.0 at aa 47-69; Signal anchor predicted for TA03725 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 0.999) with cleavage site probability 0.000 between residues -1 and 0
1 probable transmembrane helix predicted for TA03725 by TMHMM2.0 at aa 47-69
note; Tap-24g11.q1c.cand.100 - score = 76.91; 1 probable transmembrane helix predicted for TA03730 by TMHMM2.0 at aa 46-68; Signal anchor predicted for TA03730 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 0.925) with cleavage site probability 0.000 between residues -1 and 0
1 probable transmembrane helix predicted for TA03730 by TMHMM2.0 at aa 46-68
cysteine protease precursor, tacP, putative
note; Tap-24g11.q1c.cand.100 - score = 76.91; 1 probable transmembrane helix predicted for TA03735 by TMHMM2.0 at aa 45-67; Signal anchor predicted for TA03735 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 0.978) with cleavage site probability 0.000 between residues 59 and 60
Signal anchor predicted for TA03735 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 0.978) with cleavage site probability 0.000 between residues 59 and 60
1 probable transmembrane helix predicted for TA03735 by TMHMM2.0 at aa 45-67
note; Tap-24g11.q1c.cand.101 - score = 24.10; 1 probable transmembrane helix predicted for TA03740 by TMHMM2.0 at aa 38-60; Signal anchor predicted for TA03740 by SignalP 2.0 HMM (Signal peptide probability 0.005, signal anchor probability 0.840) with cleavage site probability 0.005 between residues 54 and 55
Signal anchor predicted for TA03740 by SignalP 2.0 HMM (Signal peptide probability 0.005, signal anchor probability 0.840) with cleavage site probability 0.005 between residues 54 and 55
1 probable transmembrane helix predicted for TA03740 by TMHMM2.0 at aa 38-60
note; Tap-24g11.q1c.cand.102 - score = 35.38; 1 probable transmembrane helix predicted for TA03745 by TMHMM2.0 at aa 43-65; Signal anchor predicted for TA03745 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 0.972) with cleavage site probability 0.000 between residues 58 and 59
Signal anchor predicted for TA03745 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 0.972) with cleavage site probability 0.000 between residues 58 and 59
1 probable transmembrane helix predicted for TA03745 by TMHMM2.0 at aa 43-65
note; Tap-24g11.q1c.cand.103 - score = 35.76; 1 probable transmembrane helix predicted for TA03750 by TMHMM2.0 at aa 43-65; Signal anchor predicted for TA03750 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 0.972) with cleavage site probability 0.000 between residues 58 and 59
Signal anchor predicted for TA03750 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 0.972) with cleavage site probability 0.000 between residues 58 and 59
1 probable transmembrane helix predicted for TA03750 by TMHMM2.0 at aa 43-65
note; 1 probable transmembrane helix predicted for TA03755 by TMHMM2.0 at aa 894-916; Signal peptide predicted for TA03755 by SignalP 2.0 HMM (Signal peptide probability 0.910, signal anchor probability 0.002) with cleavage site probability 0.441 between residues 18 and 19; GPI-Anchor Signal predicted for TA03755 by DGPI v2.04 with cleavage site probability 0.59159994 near 896
Signal peptide predicted for TA03755 by SignalP 2.0 HMM (Signal peptide probability 0.910, signal anchor probability 0.002) with cleavage site probability 0.441 between residues 18 and 19
1 probable transmembrane helix predicted for TA03755 by TMHMM2.0 at aa 894-916
GPI-Anchor Signal predicted for TA03755 by DGPI v2.04 with cleavage site probability 0.59159994 near 896
note; Tap-24g11.q1c.C.cand.135 - score = 23.35; Signal peptide predicted for TA03770 by SignalP 2.0 HMM (Signal peptide probability 0.777, signal anchor probability 0.000) with cleavage site probability 0.761 between residues 18 and 19
Signal peptide predicted for TA03770 by SignalP 2.0 HMM (Signal peptide probability 0.777, signal anchor probability 0.000) with cleavage site probability 0.761 between residues 18 and 19
note; Tap-24g11.q1c.C.cand.134 - score = 43.67; Apicoplast targetting peptide predicted by the PlasmoAP tool; 1 probable transmembrane helix predicted for TA03775 by TMHMM2.0 at aa 2-20; Signal peptide predicted for TA03775 by SignalP 2.0 HMM (Signal peptide probability 0.933, signal anchor probability 0.011) with cleavage site probability 0.655 between residues 17 and 18
1 probable transmembrane helix predicted for TA03775 by TMHMM2.0 at aa 2-20
Signal peptide predicted for TA03775 by SignalP 2.0 HMM (Signal peptide probability 0.933, signal anchor probability 0.011) with cleavage site probability 0.655 between residues 17 and 18
splicing factor (PRP8 homologue), putative
note; Tap-24g11.q1c.C.cand.131 - score = 8.64
note; Tap-24g11.q1c.C.cand.129 - score = 9.36
note; Tap-24g11.q1c.cand.108 - score = 8.80
note; Tap-24g11.q1c.cand.109 - score = 14.97; 3 probable transmembrane helices predicted for TA03825 by TMHMM2.0 at aa 219-238, 242-264 and 277-299
3 probable transmembrane helices predicted for TA03825 by TMHMM2.0 at aa 219-238, 242-264 and 277-299
note; Tap-24g11.q1c.cand.111 - score = 67.43; 1 probable transmembrane helix predicted for TA03835 by TMHMM2.0 at aa 13-35
1 probable transmembrane helix predicted for TA03835 by TMHMM2.0 at aa 13-35
note; Tap-24g11.q1c.C.cand.127 - score = 82.68; 2 probable transmembrane helices predicted for TA03845 by TMHMM2.0 at aa 36-58 and 203-225
2 probable transmembrane helices predicted for TA03845 by TMHMM2.0 at aa 36-58 and 203-225
Tap-24g11.q1c.C.cand.127 - score = 82.68; Signal peptide predicted for TA03850 by SignalP 2.0 HMM (Signal peptide probability 0.836, signal anchor probability 0.002) with cleavage site probability 0.318 between residues 33 and 34
Signal peptide predicted for TA03850 by SignalP 2.0 HMM (Signal peptide probability 0.836, signal anchor probability 0.002) with cleavage site probability 0.318 between residues 33 and 34
note; Tap-24g11.q1c.C.cand.126 - score = 17.57; 6 probable transmembrane helices predicted for TA03855 by TMHMM2.0 at aa 17-36, 40-62, 69-91, 101-123, 135-157 and 196-218; Signal peptide predicted for TA03855 by SignalP 2.0 HMM (Signal peptide probability 0.999, signal anchor probability 0.000) with cleavage site probability 0.433 between residues 38 and 39
6 probable transmembrane helices predicted for TA03855 by TMHMM2.0 at aa 17-36, 40-62, 69-91, 101-123, 135-157 and 196-218
Signal peptide predicted for TA03855 by SignalP 2.0 HMM (Signal peptide probability 0.999, signal anchor probability 0.000) with cleavage site probability 0.433 between residues 38 and 39
note; Tap-24g11.q1c.cand.113 - score = 28.01; 1 probable transmembrane helix predicted for TA03865 by TMHMM2.0 at aa 7-29
1 probable transmembrane helix predicted for TA03865 by TMHMM2.0 at aa 7-29
note; Tap-24g11.q1c.C.cand.124 - score = 14.22; Signal peptide predicted for TA03870 by SignalP 2.0 HMM (Signal peptide probability 1.000, signal anchor probability 0.000) with cleavage site probability 0.982 between residues 17 and 18
Signal peptide predicted for TA03870 by SignalP 2.0 HMM (Signal peptide probability 1.000, signal anchor probability 0.000) with cleavage site probability 0.982 between residues 17 and 18
chromosome segregation (SMC) protein, putative
note; Tap-24g11.q1c.cand.121 - score = 9.09
note; Tap-24g11.q1c.C.cand.121 - score = 31.87; RNA-binding protein, putative
note; Tap-24g11.q1c.cand.122 - score = 18.02; Signal peptide predicted for TA03910 by SignalP 2.0 HMM (Signal peptide probability 0.726, signal anchor probability 0.000) with cleavage site probability 0.649 between residues 15 and 16
Signal peptide predicted for TA03910 by SignalP 2.0 HMM (Signal peptide probability 0.726, signal anchor probability 0.000) with cleavage site probability 0.649 between residues 15 and 16
note; Tap-24g11.q1c.C.cand.120 - score = 8.33
1 probable transmembrane helix predicted for TA03940 by TMHMM2.0 at aa 608-630
note; Tap-24g11.q1c.cand.126 - score = 28.71; 1 probable transmembrane helix predicted for TA03950 by TMHMM2.0 at aa 10-32; Signal anchor predicted for TA03950 by SignalP 2.0 HMM (Signal peptide probability 0.125, signal anchor probability 0.762) with cleavage site probability 0.107 between residues 26 and 27
Signal anchor predicted for TA03950 by SignalP 2.0 HMM (Signal peptide probability 0.125, signal anchor probability 0.762) with cleavage site probability 0.107 between residues 26 and 27
1 probable transmembrane helix predicted for TA03950 by TMHMM2.0 at aa 10-32
note; Tap-24g11.q1c.cand.128 - score = 35.76; 4 probable transmembrane helices predicted for TA03965 by TMHMM2.0 at aa 120-142, 193-215, 284-306 and 389-411
4 probable transmembrane helices predicted for TA03965 by TMHMM2.0 at aa 120-142, 193-215, 284-306 and 389-411
ubiquitin-conjugating enzyme E2, putative
note; Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal peptide predicted for TA03995 by SignalP 2.0 HMM (Signal peptide probability 0.931, signal anchor probability 0.019) with cleavage site probability 0.729 between residues 22 and 23
Signal peptide predicted for TA03995 by SignalP 2.0 HMM (Signal peptide probability 0.931, signal anchor probability 0.019) with cleavage site probability 0.729 between residues 22 and 23
integral membrane protein family I, putative
note; Tap-24g11.q1c.cand.134 - score = 7.00; 5 probable transmembrane helices predicted for TA04020 by TMHMM2.0 at aa 35-57, 72-94, 107-129, 158-180 and 185-207
5 probable transmembrane helices predicted for TA04020 by TMHMM2.0 at aa 35-57, 72-94, 107-129, 158-180 and 185-207
ER lumen protein retaining receptor 1, putative
note; Tap-24g11.q1c.cand.136 - score = 14.78; 6 probable transmembrane helices predicted for TA04030 by TMHMM2.0 at aa 53-70, 75-97, 110-132, 142-159, 179-201 and 268-290; Signal anchor predicted for TA04030 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 0.777) with cleavage site probability 0.000 between residues -1 and 0
6 probable transmembrane helices predicted for TA04030 by TMHMM2.0 at aa 53-70, 75-97, 110-132, 142-159, 179-201 and 268-290
note; Tap-24g11.q1c.cand.144 - score = 21.03; 2 probable transmembrane helices predicted for TA04095 by TMHMM2.0 at aa 362-384 and 396-415
2 probable transmembrane helices predicted for TA04095 by TMHMM2.0 at aa 362-384 and 396-415
0513. Could not extend upstream; GPI-Anchor Signal predicted for TA04100 by DGPI v2.04 with cleavage site probability 0.1462 near 88
GPI-Anchor Signal predicted for TA04100 by DGPI v2.04 with cleavage site probability 0.1462 near 88
note; Tap-24g11.q1c.C.cand.108 - score = 45.42; Signal peptide predicted for TA04105 by SignalP 2.0 HMM (Signal peptide probability 0.960, signal anchor probability 0.000) with cleavage site probability 0.822 between residues 20 and 21
Signal peptide predicted for TA04105 by SignalP 2.0 HMM (Signal peptide probability 0.960, signal anchor probability 0.000) with cleavage site probability 0.822 between residues 20 and 21
note; Tap-24g11.q1c.C.cand.105 - score = 16.90; 3 probable transmembrane helices predicted for TA04120 by TMHMM2.0 at aa 198-220, 243-265 and 299-321
3 probable transmembrane helices predicted for TA04120 by TMHMM2.0 at aa 198-220, 243-265 and 299-321
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplast precursor, putative
note; Tap-24g11.q1c.cand.147 - score = 15.12; Signal peptide predicted for TA04155 by SignalP 2.0 HMM (Signal peptide probability 0.999, signal anchor probability 0.000) with cleavage site probability 0.832 between residues 18 and 19; GPI-Anchor Signal predicted for TA04155 by DGPI v2.04, no cleavage site predicted
Signal peptide predicted for TA04155 by SignalP 2.0 HMM (Signal peptide probability 0.999, signal anchor probability 0.000) with cleavage site probability 0.832 between residues 18 and 19
protein translocation complex subunit (SEC61 gamma chain), putative
1 probable transmembrane helix predicted for TA04175 by TMHMM2.0 at aa 49-71
note; Tap-24g11.q1c.cand.149 - score = 7.74
note; Tap-24g11.q1c.C.cand.98 - score = 34.21
note; Tap-24g11.q1c.C.cand.97 - score = 65.60
note; Tap-24g11.q1c.cand.153 - score = 8.86; 1 probable transmembrane helix predicted for TA04220 by TMHMM2.0 at aa 101-119
1 probable transmembrane helix predicted for TA04220 by TMHMM2.0 at aa 101-119
note; Tap-24g11.q1c.C.cand.96 - score = 47.46; 1 probable transmembrane helix predicted for TA04225 by TMHMM2.0 at aa 32-51; Signal anchor predicted for TA04225 by SignalP 2.0 HMM (Signal peptide probability 0.005, signal anchor probability 0.813) with cleavage site probability 0.001 between residues 48 and 49
1 probable transmembrane helix predicted for TA04225 by TMHMM2.0 at aa 32-51
Signal anchor predicted for TA04225 by SignalP 2.0 HMM (Signal peptide probability 0.005, signal anchor probability 0.813) with cleavage site probability 0.001 between residues 48 and 49
note; Tap-24g11.q1c.C.cand.94 - score = 47.70; 1 probable transmembrane helix predicted for TA04245 by TMHMM2.0 at aa 278-300
1 probable transmembrane helix predicted for TA04245 by TMHMM2.0 at aa 278-300
note; Tap-24g11.q1c.C.cand.93 - score = 20.34
note; Tap-24g11.q1c.C.cand.92 - score = 73.12
small nuclear ribonucleoprotein (E), putative
note; Tap-24g11.q1c.C.cand.91 - score = 51.97
note; Tap-24g11.q1c.C.cand.90 - score = 19.91
note; Tap-24g11.q1c.C.cand.89 - score = 90.99
DNA repair (RAD6) endonuclease, putative
note; Tap-24g11.q1c.C.cand.88 - score = 98.86
note; 1 probable transmembrane helix predicted for TA04345 by TMHMM2.0 at aa 213-235
1 probable transmembrane helix predicted for TA04345 by TMHMM2.0 at aa 213-235
1 probable transmembrane helix predicted for TA04350 by TMHMM2.0 at aa 7-29
note; Tap-24g11.q1c.cand.166 - score = 29.44; Signal peptide predicted for TA04375 by SignalP 2.0 HMM (Signal peptide probability 0.706, signal anchor probability 0.161) with cleavage site probability 0.272 between residues 27 and 28
Signal peptide predicted for TA04375 by SignalP 2.0 HMM (Signal peptide probability 0.706, signal anchor probability 0.161) with cleavage site probability 0.272 between residues 27 and 28
note; Tap-24g11.q1c.C.cand.86 - score = 21.87; 4 probable transmembrane helices predicted for TA04380 by TMHMM2.0 at aa 212-234, 288-310, 339-361 and 391-413
4 probable transmembrane helices predicted for TA04380 by TMHMM2.0 at aa 212-234, 288-310, 339-361 and 391-413
note; Tap-24g11.q1c.cand.167 - score = 51.49; 1 probable transmembrane helix predicted for TA04385 by TMHMM2.0 at aa 692-714
1 probable transmembrane helix predicted for TA04385 by TMHMM2.0 at aa 692-714
note; Tap-24g11.q1c.cand.167 - score = 51.49; 2 probable transmembrane helices predicted for TA04390 by TMHMM2.0 at aa 5-27 and 188-210; Signal peptide predicted for TA04390 by SignalP 2.0 HMM (Signal peptide probability 0.960, signal anchor probability 0.002) with cleavage site probability 0.438 between residues 22 and 23
Signal peptide predicted for TA04390 by SignalP 2.0 HMM (Signal peptide probability 0.960, signal anchor probability 0.002) with cleavage site probability 0.438 between residues 22 and 23
2 probable transmembrane helices predicted for TA04390 by TMHMM2.0 at aa 5-27 and 188-210
note; Tap-24g11.q1c.C.cand.85 - score = 26.90; 2 probable transmembrane helices predicted for TA04395 by TMHMM2.0 at aa 5-27 and 462-479; GPI-Anchor Signal predicted for TA04395 by DGPI v2.04, no cleavage site predicted
2 probable transmembrane helices predicted for TA04395 by TMHMM2.0 at aa 5-27 and 462-479
mitochondrial import inner membrane translocase subunit, putative
1 probable transmembrane helix predicted for TA04405 by TMHMM2.0 at aa 13-35
note; Tap-24g11.q1c.C.cand.83 - score = 31.76
note; Tap-24g11.q1c.C.cand.82 - score = 49.91; Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal peptide predicted for TA04430 by SignalP 2.0 HMM (Signal peptide probability 0.781, signal anchor probability 0.013) with cleavage site probability 0.664 between residues 21 and 22
Signal peptide predicted for TA04430 by SignalP 2.0 HMM (Signal peptide probability 0.781, signal anchor probability 0.013) with cleavage site probability 0.664 between residues 21 and 22
U6 snRNA-associated Sm-like protein, putative
2 probable transmembrane helices predicted for TA04440 by TMHMM2.0 at aa 7-29 and 74-96
note; Tap-24g11.q1c.cand.171 - score = 49.51; 1 probable transmembrane helix predicted for TA04450 by TMHMM2.0 at aa 7-26; Signal peptide predicted for TA04450 by SignalP 2.0 HMM (Signal peptide probability 0.785, signal anchor probability 0.190) with cleavage site probability 0.384 between residues 26 and 27
Signal peptide predicted for TA04450 by SignalP 2.0 HMM (Signal peptide probability 0.785, signal anchor probability 0.190) with cleavage site probability 0.384 between residues 26 and 27
1 probable transmembrane helix predicted for TA04450 by TMHMM2.0 at aa 7-26
dehydrodolichyl diphosphate synthase, putative
note; Tap-24g11.q1c.cand.172 - score = 9.76
note; Tap-24g11.q1c.cand.173 - score = 13.73; 4 probable transmembrane helices predicted for TA04460 by TMHMM2.0 at aa 22-44, 187-209, 224-246 and 291-313
4 probable transmembrane helices predicted for TA04460 by TMHMM2.0 at aa 22-44, 187-209, 224-246 and 291-313
note; Tap-24g11.q1c.C.cand.80 - score = 26.02
note; Tap-24g11.q1c.C.cand.79 - score = 16.04
note; Tap-24g11.q1c.C.cand.78 - score = 25.56
phosphatidylinositol-4-phosphate (PIP) 5-kinase, putative
note; Tap-24g11.q1c.C.cand.77 - score = 7.03
U3 small nucleolar ribonucleoprotein or 40S ribosomal protein S4-like, putative
note; Tap-24g11.q1c.C.cand.76 - score = 37.97
note; Tap-24g11.q1c.cand.178 - score = 13.36; 4 probable transmembrane helices predicted for TA04520 by TMHMM2.0 at aa 64-86, 101-123, 204-226 and 268-290
4 probable transmembrane helices predicted for TA04520 by TMHMM2.0 at aa 64-86, 101-123, 204-226 and 268-290
DEAD-box family (RNA) helicase, putative
note; Tap-24g11.q1c.C.cand.75 - score = 42.26
spliceosome-associated protein, putative
note; Tap-24g11.q1c.C.cand.74 - score = 65.90
note; Tap-24g11.q1c.C.cand.73 - score = 12.23; 1 probable transmembrane helix predicted for TA04545 by TMHMM2.0 at aa 7-29; Signal peptide predicted for TA04545 by SignalP 2.0 HMM (Signal peptide probability 0.831, signal anchor probability 0.023) with cleavage site probability 0.659 between residues 21 and 22
1 probable transmembrane helix predicted for TA04545 by TMHMM2.0 at aa 7-29
Signal peptide predicted for TA04545 by SignalP 2.0 HMM (Signal peptide probability 0.831, signal anchor probability 0.023) with cleavage site probability 0.659 between residues 21 and 22
note; Tap-24g11.q1c.cand.183 - score = 38.90; 10 probable transmembrane helices predicted for TA04565 by TMHMM2.0 at aa 28-50, 63-85, 89-111, 161-178, 191-213, 243-265, 285-307, 319-341, 356-378 and 411-433; GPI-Anchor Signal predicted for TA04565 by DGPI v2.04 with cleavage site probability 0.2924 near 402
GPI-Anchor Signal predicted for TA04565 by DGPI v2.04 with cleavage site probability 0.2924 near 402
note; Tap-24g11.q1c.cand.184 - score = 21.33; 1 probable transmembrane helix predicted for TA04570 by TMHMM2.0 at aa 133-155
1 probable transmembrane helix predicted for TA04570 by TMHMM2.0 at aa 133-155
DNA helicase (ruvB-like protein), putative
note; Tap-24g11.q1c.C.cand.70 - score = 41.34
note; Tap-24g11.q1c.C.cand.69 - score = 14.60; 2 probable transmembrane helices predicted for TA04580 by TMHMM2.0 at aa 15-37 and 95-117
2 probable transmembrane helices predicted for TA04580 by TMHMM2.0 at aa 15-37 and 95-117
proliferating cell nuclear antigen (PCNA) 1, putative
note; Tap-24g11.q1c.C.cand.68 - score = 27.94
note; Tap-24g11.q1c.C.cand.67 - score = 33.70
note; Tap-24g11.q1c.cand.186 - score = 8.48
note; Tap-24g11.q1c.C.cand.66 - score = 12.23
note; Tap-24g11.q1c.cand.187 - score = 75.08; 1 probable transmembrane helix predicted for TA04615 by TMHMM2.0 at aa 92-114
1 probable transmembrane helix predicted for TA04615 by TMHMM2.0 at aa 92-114
note; Tap-24g11.q1c.C.cand.64 - score = 69.15
note; Tap-24g11.q1c.C.cand.63 - score = 37.71
note; Tap-24g11.q1c.C.cand.62 - score = 52.90
note; Tap-24g11.q1c.C.cand.61 - score = 36.17; 6 probable transmembrane helices predicted for TA04635 by TMHMM2.0 at aa 126-148, 153-172, 177-199, 226-248, 253-275 and 346-363; Signal peptide predicted for TA04635 by SignalP 2.0 HMM (Signal peptide probability 0.965, signal anchor probability 0.000) with cleavage site probability 0.954 between residues 23 and 24
6 probable transmembrane helices predicted for TA04635 by TMHMM2.0 at aa 126-148, 153-172, 177-199, 226-248, 253-275 and 346-363
Signal peptide predicted for TA04635 by SignalP 2.0 HMM (Signal peptide probability 0.965, signal anchor probability 0.000) with cleavage site probability 0.954 between residues 23 and 24
note; Tap-24g11.q1c.cand.190 - score = 33.10; 2 probable transmembrane helices predicted for TA04655 by TMHMM2.0 at aa 128-150 and 157-179
2 probable transmembrane helices predicted for TA04655 by TMHMM2.0 at aa 128-150 and 157-179
note; Tap-24g11.q1c.C.cand.60 - score = 21.17
note; Tap-24g11.q1c.C.cand.59 - score = 83.46
note; Tap-24g11.q1c.C.cand.58 - score = 23.52; Signal peptide predicted for TA04670 by SignalP 2.0 HMM (Signal peptide probability 0.903, signal anchor probability 0.000) with cleavage site probability 0.847 between residues 18 and 19
Signal peptide predicted for TA04670 by SignalP 2.0 HMM (Signal peptide probability 0.903, signal anchor probability 0.000) with cleavage site probability 0.847 between residues 18 and 19
weak similarity to Theileria annulata Tash1; Signal peptide predicted for TA09460 by SignalP 2.0 HMM (Signal peptide probability 0.903, signal anchor probability 0.000) with cleavage site probability 0.847 between residues 18 and 19
Signal peptide predicted for TA09460 by SignalP 2.0 HMM (Signal peptide probability 0.903, signal anchor probability 0.000) with cleavage site probability 0.847 between residues 18 and 19
weak similarity to Theileria annulata Tash1; Signal peptide predicted for TA09465 by SignalP 2.0 HMM (Signal peptide probability 0.903, signal anchor probability 0.000) with cleavage site probability 0.847 between residues 18 and 19
Signal peptide predicted for TA09465 by SignalP 2.0 HMM (Signal peptide probability 0.903, signal anchor probability 0.000) with cleavage site probability 0.847 between residues 18 and 19
weak similarity to Theileria annulata Tash1; 2 probable transmembrane helices predicted for TA09470 by TMHMM2.0 at aa 4-22 and 203-225; Signal peptide predicted for TA09470 by SignalP 2.0 HMM (Signal peptide probability 0.957, signal anchor probability 0.000) with cleavage site probability 0.906 between residues 18 and 19
2 probable transmembrane helices predicted for TA09470 by TMHMM2.0 at aa 4-22 and 203-225
Signal peptide predicted for TA09470 by SignalP 2.0 HMM (Signal peptide probability 0.957, signal anchor probability 0.000) with cleavage site probability 0.906 between residues 18 and 19
weak similarity to Theileria annulata Tash1; Signal peptide predicted for TA09475 by SignalP 2.0 HMM (Signal peptide probability 0.903, signal anchor probability 0.000) with cleavage site probability 0.847 between residues 18 and 19
Signal peptide predicted for TA09475 by SignalP 2.0 HMM (Signal peptide probability 0.903, signal anchor probability 0.000) with cleavage site probability 0.847 between residues 18 and 19
weak similarity to Theileria annulata Tash1; Signal peptide predicted for TA09480 by SignalP 2.0 HMM (Signal peptide probability 0.903, signal anchor probability 0.000) with cleavage site probability 0.847 between residues 18 and 19
Signal peptide predicted for TA09480 by SignalP 2.0 HMM (Signal peptide probability 0.903, signal anchor probability 0.000) with cleavage site probability 0.847 between residues 18 and 19
weak similarity to Theileria annulata Tash1; 2 probable transmembrane helices predicted for TA09485 by TMHMM2.0 at aa 4-22 and 76-98; Signal peptide predicted for TA09485 by SignalP 2.0 HMM (Signal peptide probability 0.903, signal anchor probability 0.000) with cleavage site probability 0.847 between residues 18 and 19
2 probable transmembrane helices predicted for TA09485 by TMHMM2.0 at aa 4-22 and 76-98
Signal peptide predicted for TA09485 by SignalP 2.0 HMM (Signal peptide probability 0.903, signal anchor probability 0.000) with cleavage site probability 0.847 between residues 18 and 19
weak similarity to Theileria annulata Tash1; 2 probable transmembrane helices predicted for TA09490 by TMHMM2.0 at aa 4-22 and 76-98; Signal peptide predicted for TA09490 by SignalP 2.0 HMM (Signal peptide probability 0.957, signal anchor probability 0.000) with cleavage site probability 0.906 between residues 18 and 19
2 probable transmembrane helices predicted for TA09490 by TMHMM2.0 at aa 4-22 and 76-98
Signal peptide predicted for TA09490 by SignalP 2.0 HMM (Signal peptide probability 0.957, signal anchor probability 0.000) with cleavage site probability 0.906 between residues 18 and 19
Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal peptide predicted for TA09495 by SignalP 2.0 HMM (Signal peptide probability 0.826, signal anchor probability 0.017) with cleavage site probability 0.607 between residues 17 and 18
Signal peptide predicted for TA09495 by SignalP 2.0 HMM (Signal peptide probability 0.826, signal anchor probability 0.017) with cleavage site probability 0.607 between residues 17 and 18
Signal peptide predicted for TA09500 by SignalP 2.0 HMM (Signal peptide probability 0.903, signal anchor probability 0.000) with cleavage site probability 0.847 between residues 18 and 19
note; Tap-24g11.q1c.C.cand.57 - score = 33.43; Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal peptide predicted for TA04675 by SignalP 2.0 HMM (Signal peptide probability 0.903, signal anchor probability 0.000) with cleavage site probability 0.847 between residues 18 and 19
Signal peptide predicted for TA04675 by SignalP 2.0 HMM (Signal peptide probability 0.903, signal anchor probability 0.000) with cleavage site probability 0.847 between residues 18 and 19
Signal peptide predicted for TA04680 by SignalP 2.0 HMM (Signal peptide probability 0.903, signal anchor probability 0.000) with cleavage site probability 0.847 between residues 18 and 19
note; Tap-24g11.q1c.C.cand.55 - score = 22.55; Signal peptide predicted for TA04685 by SignalP 2.0 HMM (Signal peptide probability 0.903, signal anchor probability 0.000) with cleavage site probability 0.847 between residues 18 and 19
Signal peptide predicted for TA04685 by SignalP 2.0 HMM (Signal peptide probability 0.903, signal anchor probability 0.000) with cleavage site probability 0.847 between residues 18 and 19
note; Tap-24g11.q1c.C.cand.54 - score = 22.92; 2 probable transmembrane helices predicted for TA04690 by TMHMM2.0 at aa 4-22 and 76-98; Signal peptide predicted for TA04690 by SignalP 2.0 HMM (Signal peptide probability 0.903, signal anchor probability 0.000) with cleavage site probability 0.847 between residues 18 and 19
2 probable transmembrane helices predicted for TA04690 by TMHMM2.0 at aa 4-22 and 76-98
Signal peptide predicted for TA04690 by SignalP 2.0 HMM (Signal peptide probability 0.903, signal anchor probability 0.000) with cleavage site probability 0.847 between residues 18 and 19
note; Tap-24g11.q1c.C.cand.53 - score = 23.67; 2 probable transmembrane helices predicted for TA04695 by TMHMM2.0 at aa 4-22 and 76-98; Signal peptide predicted for TA04695 by SignalP 2.0 HMM (Signal peptide probability 0.903, signal anchor probability 0.000) with cleavage site probability 0.847 between residues 18 and 19
2 probable transmembrane helices predicted for TA04695 by TMHMM2.0 at aa 4-22 and 76-98
Signal peptide predicted for TA04695 by SignalP 2.0 HMM (Signal peptide probability 0.903, signal anchor probability 0.000) with cleavage site probability 0.847 between residues 18 and 19
note; Tap-24g11.q1c.C.cand.52 - score = 27.79; Signal peptide predicted for TA04705 by SignalP 2.0 HMM (Signal peptide probability 0.782, signal anchor probability 0.000) with cleavage site probability 0.307 between residues 19 and 20
Signal peptide predicted for TA04705 by SignalP 2.0 HMM (Signal peptide probability 0.782, signal anchor probability 0.000) with cleavage site probability 0.307 between residues 19 and 20
high-mobility-group (HMG) protein, putative
note; Tap-24g11.q1c.C.cand.50 - score = 13.84
origin recognition complex protein 1, putative
note; Tap-24g11.q1c.C.cand.49 - score = 12.63
note; Tap-24g11.q1c.C.cand.48 - score = 32.59
note; Tap-24g11.q1c.C.cand.47 - score = 22.84
note; Tap-24g11.q1c.C.cand.46 - score = 39.19
note; Tap-24g11.q1c.C.cand.45 - score = 35.92
note; Tap-24g11.q1c.cand.196 - score = 7.75
5 probable transmembrane helices predicted for TA04785 by TMHMM2.0 at aa 4-21, 28-50, 89-111, 118-137 and 160-182; Signal peptide predicted for TA04785 by SignalP 2.0 HMM (Signal peptide probability 0.906, signal anchor probability 0.094) with cleavage site probability 0.190 between residues 49 and 50; GPI-Anchor Signal predicted for TA04785 by DGPI v2.04 with cleavage site probability 0.59159994 near 156
Signal peptide predicted for TA04785 by SignalP 2.0 HMM (Signal peptide probability 0.906, signal anchor probability 0.094) with cleavage site probability 0.190 between residues 49 and 50
5 probable transmembrane helices predicted for TA04785 by TMHMM2.0 at aa 4-21, 28-50, 89-111, 118-137 and 160-182
GPI-Anchor Signal predicted for TA04785 by DGPI v2.04 with cleavage site probability 0.59159994 near 156
note; Tap-24g11.q1c.cand.198 - score = 98.17; 3 probable transmembrane helices predicted for TA04790 by TMHMM2.0 at aa 12-34, 220-242 and 357-379
3 probable transmembrane helices predicted for TA04790 by TMHMM2.0 at aa 12-34, 220-242 and 357-379
note; Tap-24g11.q1c.cand.199 - score = 20.18; Signal peptide predicted for TA04795 by SignalP 2.0 HMM (Signal peptide probability 0.912, signal anchor probability 0.003) with cleavage site probability 0.360 between residues 16 and 17
Signal peptide predicted for TA04795 by SignalP 2.0 HMM (Signal peptide probability 0.912, signal anchor probability 0.003) with cleavage site probability 0.360 between residues 16 and 17
note; Tap-24g11.q1c.C.cand.41 - score = 22.29; 1 probable transmembrane helix predicted for TA04810 by TMHMM2.0 at aa 112-134
1 probable transmembrane helix predicted for TA04810 by TMHMM2.0 at aa 112-134
note; Tap-24g11.q1c.cand.200 - score = 36.74; 2 probable transmembrane helices predicted for TA04815 by TMHMM2.0 at aa 576-595 and 683-705
2 probable transmembrane helices predicted for TA04815 by TMHMM2.0 at aa 576-595 and 683-705
note; Tap-24g11.q1c.C.cand.40 - score = 48.41; 3 probable transmembrane helices predicted for TA04820 by TMHMM2.0 at aa 33-55, 411-433 and 459-481
3 probable transmembrane helices predicted for TA04820 by TMHMM2.0 at aa 33-55, 411-433 and 459-481
5 probable transmembrane helices predicted for TA04825 by TMHMM2.0 at aa 2-21, 65-87, 147-169, 173-192 and 357-379; Signal peptide predicted for TA04825 by SignalP 2.0 HMM (Signal peptide probability 0.837, signal anchor probability 0.000) with cleavage site probability 0.244 between residues 15 and 16; GPI-Anchor Signal predicted for TA04825 by DGPI v2.04 with cleavage site probability 2.1199 near 1096
GPI-Anchor Signal predicted for TA04825 by DGPI v2.04 with cleavage site probability 2.1199 near 1096
5 probable transmembrane helices predicted for TA04825 by TMHMM2.0 at aa 2-21, 65-87, 147-169, 173-192 and 357-379
Signal peptide predicted for TA04825 by SignalP 2.0 HMM (Signal peptide probability 0.837, signal anchor probability 0.000) with cleavage site probability 0.244 between residues 15 and 16
note; Tap-24g11.q1c.C.cand.39 - score = 25.71; 4 probable transmembrane helices predicted for TA04830 by TMHMM2.0 at aa 5-22, 52-71, 83-105 and 120-142; Signal peptide predicted for TA04830 by SignalP 2.0 HMM (Signal peptide probability 0.721, signal anchor probability 0.110) with cleavage site probability 0.340 between residues 21 and 22
4 probable transmembrane helices predicted for TA04830 by TMHMM2.0 at aa 5-22, 52-71, 83-105 and 120-142
Signal peptide predicted for TA04830 by SignalP 2.0 HMM (Signal peptide probability 0.721, signal anchor probability 0.110) with cleavage site probability 0.340 between residues 21 and 22
note; Tap-24g11.q1c.C.cand.38 - score = 10.66; 1 probable transmembrane helix predicted for TA04835 by TMHMM2.0 at aa 7-24
1 probable transmembrane helix predicted for TA04835 by TMHMM2.0 at aa 7-24
cell divison cycle CDC48 homologue or transitional endoplasmic reticulum ATPase
ubiquitin carboxyl-terminal hydrolase, putative
note; Tap-24g11.q1c.C.cand.35 - score = 97.69
note; Tap-24g11.q1c.C.cand.34 - score = 23.03
geranylgeranyltransferase beta subunit, putative
note; Tap-24g11.q1c.C.cand.32 - score = 11.41
Apicoplast targetting peptide predicted by the PlasmoAP tool; 2 probable transmembrane helices predicted for TA04925 by TMHMM2.0 at aa 7-26 and 113-132; Signal peptide predicted for TA04925 by SignalP 2.0 HMM (Signal peptide probability 0.842, signal anchor probability 0.099) with cleavage site probability 0.597 between residues 23 and 24
Signal peptide predicted for TA04925 by SignalP 2.0 HMM (Signal peptide probability 0.842, signal anchor probability 0.099) with cleavage site probability 0.597 between residues 23 and 24
2 probable transmembrane helices predicted for TA04925 by TMHMM2.0 at aa 7-26 and 113-132
note; Tap-24g11.q1c.C.cand.31 - score = 19.33
note; Tap-24g11.q1c.cand.210 - score = 37.61; 1 probable transmembrane helix predicted for TA04935 by TMHMM2.0 at aa 7-29; Signal anchor predicted for TA04935 by SignalP 2.0 HMM (Signal peptide probability 0.001, signal anchor probability 0.997) with cleavage site probability 0.001 between residues 35 and 36
Signal anchor predicted for TA04935 by SignalP 2.0 HMM (Signal peptide probability 0.001, signal anchor probability 0.997) with cleavage site probability 0.001 between residues 35 and 36
1 probable transmembrane helix predicted for TA04935 by TMHMM2.0 at aa 7-29
note; Tap-24g11.q1c.C.cand.30 - score = 45.99; 1 probable transmembrane helix predicted for TA04940 by TMHMM2.0 at aa 7-29
1 probable transmembrane helix predicted for TA04940 by TMHMM2.0 at aa 7-29
note; Tap-24g11.q1c.C.cand.29 - score = 11.83; Apicoplast targetting peptide predicted by the PlasmoAP tool; 4 probable transmembrane helices predicted for TA04950 by TMHMM2.0 at aa 29-51, 61-83, 210-232 and 265-287; Signal anchor predicted for TA04950 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 0.911) with cleavage site probability 0.000 between residues 44 and 45
4 probable transmembrane helices predicted for TA04950 by TMHMM2.0 at aa 29-51, 61-83, 210-232 and 265-287
Signal anchor predicted for TA04950 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 0.911) with cleavage site probability 0.000 between residues 44 and 45
note; Tap-24g11.q1c.C.cand.28 - score = 73.03
note; Tap-24g11.q1c.C.cand.27 - score = 32.48; Apicoplast targetting peptide predicted by the PlasmoAP tool; 2 probable transmembrane helices predicted for TA04960 by TMHMM2.0 at aa 7-26 and 384-406; Signal peptide predicted for TA04960 by SignalP 2.0 HMM (Signal peptide probability 0.704, signal anchor probability 0.182) with cleavage site probability 0.283 between residues 29 and 30
2 probable transmembrane helices predicted for TA04960 by TMHMM2.0 at aa 7-26 and 384-406
Signal peptide predicted for TA04960 by SignalP 2.0 HMM (Signal peptide probability 0.704, signal anchor probability 0.182) with cleavage site probability 0.283 between residues 29 and 30
note; Tap-24g11.q1c.C.cand.26 - score = 21.31; 5 probable transmembrane helices predicted for TA04965 by TMHMM2.0 at aa 5-22, 79-96, 227-249, 254-276 and 286-305
5 probable transmembrane helices predicted for TA04965 by TMHMM2.0 at aa 5-22, 79-96, 227-249, 254-276 and 286-305
note; Tap-24g11.q1c.C.cand.25 - score = 20.06
note; Tap-24g11.q1c.C.cand.24 - score = 35.44
u6 snrna-associated sm-like protein lsm4, putative
note; Tap-24g11.q1c.cand.212 - score = 63.08; Signal peptide predicted for TA05000 by SignalP 2.0 HMM (Signal peptide probability 0.772, signal anchor probability 0.167) with cleavage site probability 0.526 between residues 22 and 23
Signal peptide predicted for TA05000 by SignalP 2.0 HMM (Signal peptide probability 0.772, signal anchor probability 0.167) with cleavage site probability 0.526 between residues 22 and 23
telomerase reverse transcriptase, putative
note; Tap-24g11.q1c.cand.214 - score = 52.27; 1 probable transmembrane helix predicted for TA05010 by TMHMM2.0 at aa 488-510
1 probable transmembrane helix predicted for TA05010 by TMHMM2.0 at aa 488-510
note; Tap-24g11.q1c.C.cand.22 - score = 14.39; Signal peptide predicted for TA05015 by SignalP 2.0 HMM (Signal peptide probability 1.000, signal anchor probability 0.000) with cleavage site probability 0.978 between residues 17 and 18
Signal peptide predicted for TA05015 by SignalP 2.0 HMM (Signal peptide probability 1.000, signal anchor probability 0.000) with cleavage site probability 0.978 between residues 17 and 18
note; Tap-24g11.q1c.C.cand.21 - score = 50.90
note; Tap-24g11.q1c.C.cand.20 - score = 20.91; 2 probable transmembrane helices predicted for TA05025 by TMHMM2.0 at aa 133-155 and 193-215; Signal peptide predicted for TA05025 by SignalP 2.0 HMM (Signal peptide probability 1.000, signal anchor probability 0.000) with cleavage site probability 0.982 between residues 17 and 18
2 probable transmembrane helices predicted for TA05025 by TMHMM2.0 at aa 133-155 and 193-215
Signal peptide predicted for TA05025 by SignalP 2.0 HMM (Signal peptide probability 1.000, signal anchor probability 0.000) with cleavage site probability 0.982 between residues 17 and 18
note; Tap-24g11.q1c.C.cand.19 - score = 31.93
note; Tap-24g11.q1c.C.cand.18 - score = 12.50
note; Tap-24g11.q1c.C.cand.17 - score = 22.47
note; Tap-24g11.q1c.C.cand.16 - score = 49.54
note; Tap-24g11.q1c.cand.216 - score = 8.94
ribonucleoside-diphosphate reductase large chain, putative
note; Tap-24g11.q1c.C.cand.15 - score = 60.19
note; Tap-24g11.q1c.C.cand.14 - score = 34.60
ATP-dependent Clp protease proteolytic subunit, putative
note; Tap-24g11.q1c.C.cand.13 - score = 20.38; Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal peptide predicted for TA05070 by SignalP 2.0 HMM (Signal peptide probability 0.990, signal anchor probability 0.001) with cleavage site probability 0.735 between residues 23 and 24
Signal peptide predicted for TA05070 by SignalP 2.0 HMM (Signal peptide probability 0.990, signal anchor probability 0.001) with cleavage site probability 0.735 between residues 23 and 24
note; Tap-24g11.q1c.C.cand.12 - score = 9.99
chromosome condensation (RCC1 homologue) protein, putative
glucose-6-phosphate/phosphate translocator, putative
note; Tap-24g11.q1c.cand.221 - score = 90.52; 1 probable transmembrane helix predicted for TA05115 by TMHMM2.0 at aa 497-519
1 probable transmembrane helix predicted for TA05115 by TMHMM2.0 at aa 497-519
ubiquitin-conjugating enzyme (E2), putative
note; Tap-24g11.q1c.C.cand.10 - score = 13.89
note; Tap-24g11.q1c.cand.222 - score = 36.00; 11 probable transmembrane helices predicted for TA05125 by TMHMM2.0 at aa 33-55, 99-121, 125-144, 151-173, 183-205, 218-240, 300-322, 366-388, 392-414, 427-449 and 459-481; Signal anchor predicted for TA05125 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 0.740) with cleavage site probability 0.000 between residues -1 and 0
note; Tap-24g11.q1c.C.cand.9 - score = 16.57
note; Tap-24g11.q1c.cand.223 - score = 38.75; 10 probable transmembrane helices predicted for TA05145 by TMHMM2.0 at aa 21-43, 84-106, 113-132, 142-164, 171-193, 203-225, 275-292, 332-354, 392-414 and 429-451; Signal anchor predicted for TA05145 by SignalP 2.0 HMM (Signal peptide probability 0.090, signal anchor probability 0.871) with cleavage site probability 0.027 between residues 42 and 43
Signal anchor predicted for TA05145 by SignalP 2.0 HMM (Signal peptide probability 0.090, signal anchor probability 0.871) with cleavage site probability 0.027 between residues 42 and 43
note; 3 probable transmembrane helices predicted for TA05170 by TMHMM2.0 at aa 96-118, 362-384 and 394-416
3 probable transmembrane helices predicted for TA05170 by TMHMM2.0 at aa 96-118, 362-384 and 394-416
note; Tap-24g11.q1c.cand.229 - score = 70.31; 1 probable transmembrane helix predicted for TA05175 by TMHMM2.0 at aa 7-29; Signal peptide predicted for TA05175 by SignalP 2.0 HMM (Signal peptide probability 0.663, signal anchor probability 0.000) with cleavage site probability 0.355 between residues 22 and 23
Signal peptide predicted for TA05175 by SignalP 2.0 HMM (Signal peptide probability 0.663, signal anchor probability 0.000) with cleavage site probability 0.355 between residues 22 and 23
1 probable transmembrane helix predicted for TA05175 by TMHMM2.0 at aa 7-29
note; Tap-24g11.q1c.C.cand.8 - score = 36.16
note; Tap-24g11.q1c.cand.230 - score = 68.11; 2 probable transmembrane helices predicted for TA05190 by TMHMM2.0 at aa 287-309 and 541-563
2 probable transmembrane helices predicted for TA05190 by TMHMM2.0 at aa 287-309 and 541-563
note; Tap-24g11.q1c.C.cand.7 - score = 21.71
note; Tap-24g11.q1c.C.cand.6 - score = 10.99
note; Tap-24g11.q1c.C.cand.5 - score = 69.13
1 probable transmembrane helix predicted for TA05215 by TMHMM2.0 at aa 1323-1345
glucose-6-phosphate-1-dehydrogenase, putative
note; Tap-24g11.q1c.C.cand.4 - score = 48.18
note; Tap-24g11.q1c.C.cand.3 - score = 19.45
cleavage and polyadenylation specificty factor, subunit, putative
note; Tap-24g11.q1c.cand.234 - score = 15.17; 5 probable transmembrane helices predicted for TA05235 by TMHMM2.0 at aa 24-46, 117-139, 149-171, 214-236 and 270-292; GPI-Anchor Signal predicted for TA05235 by DGPI v2.04, no cleavage site predicted
5 probable transmembrane helices predicted for TA05235 by TMHMM2.0 at aa 24-46, 117-139, 149-171, 214-236 and 270-292
note; Tap-24g11.q1c.cand.235 - score = 9.55; 4 probable transmembrane helices predicted for TA05240 by TMHMM2.0 at aa 45-67, 88-110, 120-142 and 203-225; Signal peptide predicted for TA05240 by SignalP 2.0 HMM (Signal peptide probability 0.782, signal anchor probability 0.024) with cleavage site probability 0.356 between residues 15 and 16
Signal peptide predicted for TA05240 by SignalP 2.0 HMM (Signal peptide probability 0.782, signal anchor probability 0.024) with cleavage site probability 0.356 between residues 15 and 16
4 probable transmembrane helices predicted for TA05240 by TMHMM2.0 at aa 45-67, 88-110, 120-142 and 203-225
2 probable transmembrane helices predicted for TA05245 by TMHMM2.0 at aa 26-45 and 55-77; GPI-Anchor Signal predicted for TA05245 by DGPI v2.04, no cleavage site predicted
2 probable transmembrane helices predicted for TA05245 by TMHMM2.0 at aa 26-45 and 55-77
2 probable transmembrane helices predicted for TA05250 by TMHMM2.0 at aa 327-346 and 359-378
3 probable transmembrane helices predicted for TA05255 by TMHMM2.0 at aa 20-42, 88-110 and 125-147; Signal peptide predicted for TA05255 by SignalP 2.0 HMM (Signal peptide probability 0.663, signal anchor probability 0.033) with cleavage site probability 0.361 between residues 30 and 31; GPI-Anchor Signal predicted for TA05255 by DGPI v2.04, no cleavage site predicted
Signal peptide predicted for TA05255 by SignalP 2.0 HMM (Signal peptide probability 0.663, signal anchor probability 0.033) with cleavage site probability 0.361 between residues 30 and 31
3 probable transmembrane helices predicted for TA05255 by TMHMM2.0 at aa 20-42, 88-110 and 125-147
Signal peptide predicted for TA17575 by SignalP 2.0 HMM (Signal peptide probability 0.996, signal anchor probability 0.001) with cleavage site probability 0.492 between residues 17 and 18; GPI-Anchor Signal predicted for TA17575 by DGPI v2.04, no cleavage site predicted
Signal peptide predicted for TA17575 by SignalP 2.0 HMM (Signal peptide probability 0.996, signal anchor probability 0.001) with cleavage site probability 0.492 between residues 17 and 18
Theileria-specific sub-telomeric protein, putative
9 probable transmembrane helices predicted for TA17585 by TMHMM2.0 at aa 20-39, 112-134, 144-166, 206-228, 340-362, 375-397, 420-442, 462-484 and 489-508; Signal anchor predicted for TA17585 by SignalP 2.0 HMM (Signal peptide probability 0.010, signal anchor probability 0.618) with cleavage site probability 0.002 between residues 41 and 42
Signal anchor predicted for TA17585 by SignalP 2.0 HMM (Signal peptide probability 0.010, signal anchor probability 0.618) with cleavage site probability 0.002 between residues 41 and 42
histone deacetylase family protein, putative
Contains ankyrin repeat elements and significant hit (6.5e-46)to Pfam:hitone deacetylase domain
Signal peptide predicted for TA17600 by SignalP 2.0 HMM (Signal peptide probability 0.892, signal anchor probability 0.002) with cleavage site probability 0.832 between residues 25 and 26
1 probable transmembrane helix predicted for TA17610 by TMHMM2.0 at aa 29-51; Signal anchor predicted for TA17610 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 0.834) with cleavage site probability 0.000 between residues 52 and 53
Signal anchor predicted for TA17610 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 0.834) with cleavage site probability 0.000 between residues 52 and 53
1 probable transmembrane helix predicted for TA17610 by TMHMM2.0 at aa 29-51
Contains one putative transmembrane domain; 1 probable transmembrane helix predicted for TA17615 by TMHMM2.0 at aa 188-210
1 probable transmembrane helix predicted for TA17615 by TMHMM2.0 at aa 188-210
2 probable transmembrane helices predicted for TA17780 by TMHMM2.0 at aa 678-700 and 927-949
Signal peptide predicted for TA17885 by SignalP 2.0 HMM (Signal peptide probability 0.993, signal anchor probability 0.000) with cleavage site probability 0.810 between residues 16 and 17
Signal anchor predicted for TA17945 by SignalP 2.0 HMM (Signal peptide probability 0.002, signal anchor probability 0.656) with cleavage site probability 0.001 between residues 21 and 22
mostly similar to cobalamin synthesis protein from several bacterial origin
mitochondrial matrix family protein, putative
Significant similarities to midasin-related proteins
Signal peptide predicted for TA18500 by SignalP 2.0 HMM (Signal peptide probability 0.992, signal anchor probability 0.000) with cleavage site probability 0.324 between residues 15 and 16
Signal peptide predicted for TA18505 by SignalP 2.0 HMM (Signal peptide probability 0.802, signal anchor probability 0.000) with cleavage site probability 0.551 between residues 21 and 22
Contains putative TPR repeats; significant similarities to stress-induced phosproteins from several organisms
queuine trna-ribosyltransferase-related protein, putative
Signal peptide predicted for TA18535 by SignalP 2.0 HMM (Signal peptide probability 0.998, signal anchor probability 0.000) with cleavage site probability 0.983 between residues 21 and 22
Signal peptide predicted for TA18540 by SignalP 2.0 HMM (Signal peptide probability 0.763, signal anchor probability 0.004) with cleavage site probability 0.672 between residues 18 and 19
11 probable transmembrane helices predicted for TA18545 by TMHMM2.0 at aa 15-37, 57-79, 89-111, 118-140, 150-172, 184-206, 236-258, 271-293, 308-330, 343-365 and 380-402; Signal peptide predicted for TA18545 by SignalP 2.0 HMM (Signal peptide probability 0.646, signal anchor probability 0.129) with cleavage site probability 0.400 between residues 35 and 36
Signal peptide predicted for TA18545 by SignalP 2.0 HMM (Signal peptide probability 0.646, signal anchor probability 0.129) with cleavage site probability 0.400 between residues 35 and 36
2 probable transmembrane helices predicted for TA18595 by TMHMM2.0 at aa 90-112 and 211-233
Contains 1 putative transmembrane domain; 1 probable transmembrane helix predicted for TA18600 by TMHMM2.0 at aa 80-102
1 probable transmembrane helix predicted for TA18600 by TMHMM2.0 at aa 80-102
Contains 8 putative transmembrane domain; 8 probable transmembrane helices predicted for TA18605 by TMHMM2.0 at aa 17-35, 50-69, 90-112, 156-178, 223-242, 247-266, 379-401 and 406-428
Contains significant homology to CSP SMART domain
ATP synthase alpha chain heart isoform, mitochondrial precursor, putative
Significant Pfam match to sec1 family domain
Contains a putative signal sequence; 1 probable transmembrane helix predicted for TA18625 by TMHMM2.0 at aa 34-56; Signal anchor predicted for TA18625 by SignalP 2.0 HMM (Signal peptide probability 0.002, signal anchor probability 0.992) with cleavage site probability 0.001 between residues 47 and 48
1 probable transmembrane helix predicted for TA18625 by TMHMM2.0 at aa 34-56
Signal anchor predicted for TA18625 by SignalP 2.0 HMM (Signal peptide probability 0.002, signal anchor probability 0.992) with cleavage site probability 0.001 between residues 47 and 48
replication factor c-related protein, putative
4 probable transmembrane helices predicted for TA18635 by TMHMM2.0 at aa 4-26, 82-104, 109-126 and 146-163; GPI-Anchor Signal predicted for TA18635 by DGPI v2.04, no cleavage site predicted
4 probable transmembrane helices predicted for TA18635 by TMHMM2.0 at aa 4-26, 82-104, 109-126 and 146-163
Contains putative transmembrane domains; 2 probable transmembrane helices predicted for TA18645 by TMHMM2.0 at aa 131-153 and 160-182
2 probable transmembrane helices predicted for TA18645 by TMHMM2.0 at aa 131-153 and 160-182
1 probable transmembrane helix predicted for TA18650 by TMHMM2.0 at aa 279-301
Theileria-specific integral membrane protein, putative
Contains 10 putative transmembrane domains; 10 probable transmembrane helices predicted for TA18655 by TMHMM2.0 at aa 20-42, 119-141, 151-173, 213-235, 264-286, 299-318, 387-409, 429-451, 461-483 and 550-572
The N-terminal part is conserved with a few mammlian proteins; contains a putative transmembrane domain; 1 probable transmembrane helix predicted for TA18665 by TMHMM2.0 at aa 102-124
1 probable transmembrane helix predicted for TA18665 by TMHMM2.0 at aa 102-124
Conatins one putative transmembrane domain; 1 probable transmembrane helix predicted for TA18670 by TMHMM2.0 at aa 22-44
1 probable transmembrane helix predicted for TA18670 by TMHMM2.0 at aa 22-44
NEW1 domain containing protein isoform, putative
Significant hit to Pfam New1 domain; 4 probable transmembrane helices predicted for TA18700 by TMHMM2.0 at aa 17-39, 49-71, 158-180 and 200-222; Signal anchor predicted for TA18700 by SignalP 2.0 HMM (Signal peptide probability 0.062, signal anchor probability 0.937) with cleavage site probability 0.046 between residues 34 and 35
Signal anchor predicted for TA18700 by SignalP 2.0 HMM (Signal peptide probability 0.062, signal anchor probability 0.937) with cleavage site probability 0.046 between residues 34 and 35
4 probable transmembrane helices predicted for TA18700 by TMHMM2.0 at aa 17-39, 49-71, 158-180 and 200-222
2 probable transmembrane helices predicted for TA18715 by TMHMM2.0 at aa 175-197 and 326-348
calcyclin binding protein-like, putative
nicotinate-nucleotide adenylyltransferase-like protein, putative
Signal peptide predicted for TA18745 by SignalP 2.0 HMM (Signal peptide probability 0.833, signal anchor probability 0.000) with cleavage site probability 0.337 between residues 19 and 20
Theileria-specific hypothetical protein, putative
Contains a putative signal peptide; 1 probable transmembrane helix predicted for TA18750 by TMHMM2.0 at aa 5-24; Signal peptide predicted for TA18750 by SignalP 2.0 HMM (Signal peptide probability 0.650, signal anchor probability 0.000) with cleavage site probability 0.469 between residues 19 and 20
1 probable transmembrane helix predicted for TA18750 by TMHMM2.0 at aa 5-24
Signal peptide predicted for TA18750 by SignalP 2.0 HMM (Signal peptide probability 0.650, signal anchor probability 0.000) with cleavage site probability 0.469 between residues 19 and 20
Theileria-specific conserved protein, putative
Contains a putative signal sequence; Signal peptide predicted for TA18755 by SignalP 2.0 HMM (Signal peptide probability 0.983, signal anchor probability 0.003) with cleavage site probability 0.424 between residues 20 and 21
Signal peptide predicted for TA18755 by SignalP 2.0 HMM (Signal peptide probability 0.983, signal anchor probability 0.003) with cleavage site probability 0.424 between residues 20 and 21
Contains a putative signal sequence; Signal peptide predicted for TA18760 by SignalP 2.0 HMM (Signal peptide probability 0.983, signal anchor probability 0.003) with cleavage site probability 0.423 between residues 20 and 21
Signal peptide predicted for TA18760 by SignalP 2.0 HMM (Signal peptide probability 0.983, signal anchor probability 0.003) with cleavage site probability 0.423 between residues 20 and 21
Contains a putative signal sequence; Signal peptide predicted for TA18765 by SignalP 2.0 HMM (Signal peptide probability 0.998, signal anchor probability 0.000) with cleavage site probability 0.789 between residues 15 and 16
Signal peptide predicted for TA18765 by SignalP 2.0 HMM (Signal peptide probability 0.998, signal anchor probability 0.000) with cleavage site probability 0.789 between residues 15 and 16
Contains a putative signal sequence; Signal peptide predicted for TA18770 by SignalP 2.0 HMM (Signal peptide probability 0.997, signal anchor probability 0.000) with cleavage site probability 0.400 between residues 16 and 17
Signal peptide predicted for TA18770 by SignalP 2.0 HMM (Signal peptide probability 0.997, signal anchor probability 0.000) with cleavage site probability 0.400 between residues 16 and 17
Significant Pfam & SMART hit to DEXDc2 & HELICc2 domains
SAC3/GNAP family-related protein, putative
Shows strong hit to SMART & Pfam rrm domain
regulator of nonsense transcripts-related protein, putative
2 probable transmembrane helices predicted for TA18835 by TMHMM2.0 at aa 10-29 and 42-64; Signal anchor predicted for TA18835 by SignalP 2.0 HMM (Signal peptide probability 0.034, signal anchor probability 0.954) with cleavage site probability 0.014 between residues 30 and 31
Signal anchor predicted for TA18835 by SignalP 2.0 HMM (Signal peptide probability 0.034, signal anchor probability 0.954) with cleavage site probability 0.014 between residues 30 and 31
2 probable transmembrane helices predicted for TA18835 by TMHMM2.0 at aa 10-29 and 42-64
6 probable transmembrane helices predicted for TA18840 by TMHMM2.0 at aa 79-101, 111-130, 151-173, 188-210, 222-244 and 248-270
1 probable transmembrane helix predicted for TA17625 by TMHMM2.0 at aa 195-214
7 probable transmembrane helices predicted for TA17635 by TMHMM2.0 at aa 29-48, 53-72, 130-152, 156-173, 185-207, 217-236 and 243-262; Signal anchor predicted for TA17635 by SignalP 2.0 HMM (Signal peptide probability 0.001, signal anchor probability 0.995) with cleavage site probability 0.000 between residues 51 and 52
Signal anchor predicted for TA17635 by SignalP 2.0 HMM (Signal peptide probability 0.001, signal anchor probability 0.995) with cleavage site probability 0.000 between residues 51 and 52
Signal peptide predicted for TA17655 by SignalP 2.0 HMM (Signal peptide probability 0.763, signal anchor probability 0.000) with cleavage site probability 0.476 between residues 18 and 19
ferrodoxin reductase-like protein, putative
Strong Pfam hits to pyr_redox (1.5e-14) and Rieske (3.4e-50) domains
Signal peptide predicted for TA17670 by SignalP 2.0 HMM (Signal peptide probability 0.965, signal anchor probability 0.000) with cleavage site probability 0.919 between residues 17 and 18
regulator of chromosome condensation protein, putative
Contains a putative signal sequence; 1 probable transmembrane helix predicted for TA17695 by TMHMM2.0 at aa 13-35; Signal anchor predicted for TA17695 by SignalP 2.0 HMM (Signal peptide probability 0.045, signal anchor probability 0.955) with cleavage site probability 0.023 between residues 34 and 35
1 probable transmembrane helix predicted for TA17695 by TMHMM2.0 at aa 13-35
Signal anchor predicted for TA17695 by SignalP 2.0 HMM (Signal peptide probability 0.045, signal anchor probability 0.955) with cleavage site probability 0.023 between residues 34 and 35
Contains 4 putative transmembrane domains; 4 probable transmembrane helices predicted for TA17700 by TMHMM2.0 at aa 71-93, 98-120, 132-151 and 155-177
4 probable transmembrane helices predicted for TA17700 by TMHMM2.0 at aa 71-93, 98-120, 132-151 and 155-177
Signal peptide predicted for TA17705 by SignalP 2.0 HMM (Signal peptide probability 0.972, signal anchor probability 0.000) with cleavage site probability 0.866 between residues 18 and 19
Acetyltransferase (GNAT) family protein, putative
Pfam hit (1.4e-04) to Acetyltransferase (GNAT) family domain; contains 1 putative transmembrane domain; 1 probable transmembrane helix predicted for TA17725 by TMHMM2.0 at aa 5-27
1 probable transmembrane helix predicted for TA17725 by TMHMM2.0 at aa 5-27
vacuolar ATP synthase subunit g, putative
6 probable transmembrane helices predicted for TA17740 by TMHMM2.0 at aa 34-53, 75-97, 118-140, 160-182, 194-213 and 228-247; Signal anchor predicted for TA17740 by SignalP 2.0 HMM (Signal peptide probability 0.002, signal anchor probability 0.990) with cleavage site probability 0.001 between residues 53 and 54
6 probable transmembrane helices predicted for TA17740 by TMHMM2.0 at aa 34-53, 75-97, 118-140, 160-182, 194-213 and 228-247
Signal anchor predicted for TA17740 by SignalP 2.0 HMM (Signal peptide probability 0.002, signal anchor probability 0.990) with cleavage site probability 0.001 between residues 53 and 54
6 probable transmembrane helices predicted for TA17745 by TMHMM2.0 at aa 21-43, 53-72, 110-132, 142-164, 207-229 and 251-273; Signal anchor predicted for TA17745 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 0.976) with cleavage site probability 0.000 between residues 43 and 44
Signal anchor predicted for TA17745 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 0.976) with cleavage site probability 0.000 between residues 43 and 44
6 probable transmembrane helices predicted for TA17745 by TMHMM2.0 at aa 21-43, 53-72, 110-132, 142-164, 207-229 and 251-273
Pfam hit (1.00e-26) to Hamp1_like domain
Pfam hit to protein kinase domain(6.7e-06)
Significant SMART hit (2.2e-43) to S_TKc domain and Pfam hit (5.3e-41) to pkinase domain
Significant Pfam hit (6.00e-34)to AAA family ATPase domain
Pfam hit (2.2e-22) to Met10+-like protein
protein farnesyltransferase alpha subunit, putative
SMART match (5.53e-07) to SANT domain and Pfam match (1.56e-06) to DNA-binding domain
eukaryotic translation initiation factor 5, putative
1 probable transmembrane helix predicted for TA17915 by TMHMM2.0 at aa 433-452
Contains one putative transmembrane domain; 1 probable transmembrane helix predicted for TA17920 by TMHMM2.0 at aa 212-234
1 probable transmembrane helix predicted for TA17920 by TMHMM2.0 at aa 212-234
fad-dependent glycerol-3-phosphate dehydrogenase, putative
Contains 2 putative transmembrane domains; 2 probable transmembrane helices predicted for TA17950 by TMHMM2.0 at aa 112-134 and 144-166
2 probable transmembrane helices predicted for TA17950 by TMHMM2.0 at aa 112-134 and 144-166
3 probable transmembrane helices predicted for TA17955 by TMHMM2.0 at aa 4-26, 39-58 and 63-85; Signal peptide predicted for TA17955 by SignalP 2.0 HMM (Signal peptide probability 0.940, signal anchor probability 0.025) with cleavage site probability 0.555 between residues 21 and 22
Signal peptide predicted for TA17955 by SignalP 2.0 HMM (Signal peptide probability 0.940, signal anchor probability 0.025) with cleavage site probability 0.555 between residues 21 and 22
3 probable transmembrane helices predicted for TA17955 by TMHMM2.0 at aa 4-26, 39-58 and 63-85
1 probable transmembrane helix predicted for TA17960 by TMHMM2.0 at aa 256-278
t-complex protein beta subunit, putative
small zinc finger protein Tim10 homologue, putative
Pfam hit (1.0e-10) to zf-Tim10_DDP domain
Contains a putative signal peptide; shows match (9.6e-09) to Pfam rrm domain
Shows weak similarity (9.8e-01) to Pfam abhydrolase domain; could function as a possible enzyme; some similarity to lysophospholipases from P. falciparum malaria; not enough evidence to determine the nature of this gene product
Contains 10 putative transmembrane domains; 10 probable transmembrane helices predicted for TA18010 by TMHMM2.0 at aa 38-60, 82-104, 113-135, 145-164, 171-193, 208-230, 271-293, 306-328, 341-363 and 416-438
DNA-directed RNA polymerase iii, putative
u5 small nuclear ribonucleoprotein-specific helicase, putative
11 probable transmembrane helices predicted for TA18060 by TMHMM2.0 at aa 27-49, 70-92, 102-124, 131-153, 213-235, 255-277, 302-324, 337-359, 1769-1787, 1895-1917 and 1932-1954; Signal anchor predicted for TA18060 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 0.996) with cleavage site probability 0.000 between residues 49 and 50
Signal anchor predicted for TA18060 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 0.996) with cleavage site probability 0.000 between residues 49 and 50
11 probable transmembrane helices predicted for TA18070 by TMHMM2.0 at aa 27-49, 70-92, 102-124, 131-153, 213-235, 255-277, 302-324, 337-359, 1097-1115, 1223-1245 and 1260-1282; Signal anchor predicted for TA18070 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 0.996) with cleavage site probability 0.000 between residues 49 and 50
Signal anchor predicted for TA18070 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 0.996) with cleavage site probability 0.000 between residues 49 and 50
Weak Pfam hit(3.2e-04) to Rhomboid family domain; contains a putative signal peptide; 4 probable transmembrane helices predicted for TA18080 by TMHMM2.0 at aa 228-250, 352-371, 375-397 and 404-421; Signal peptide predicted for TA18080 by SignalP 2.0 HMM (Signal peptide probability 0.978, signal anchor probability 0.000) with cleavage site probability 0.382 between residues 19 and 20; GPI-Anchor Signal predicted for TA18080 by DGPI v2.04, no cleavage site predicted
Signal peptide predicted for TA18080 by SignalP 2.0 HMM (Signal peptide probability 0.978, signal anchor probability 0.000) with cleavage site probability 0.382 between residues 19 and 20
4 probable transmembrane helices predicted for TA18080 by TMHMM2.0 at aa 228-250, 352-371, 375-397 and 404-421
clathrin adapter complex-related protein, putative
Weak Pfam hit(1.3e-03) to Clathrein_adaptor complex side chain
Contains putative signal peptide; contains 6 putative transmembrane domains; Shows moderate Pfam hit (1.2e-08) to Zip transporter domain; 8 probable transmembrane helices predicted for TA18130 by TMHMM2.0 at aa 4-26, 47-69, 89-111, 178-200, 215-237, 244-266, 272-294 and 307-329
nucleoside diphospahte hydrolase, putative
1 probable transmembrane helix predicted for TA18150 by TMHMM2.0 at aa 12-34
Pfam hit (3.1e-09) to CAAX amino terminal protease family domain; Apicoplast targetting peptide predicted by the PlasmoAP tool; 7 probable transmembrane helices predicted for TA18155 by TMHMM2.0 at aa 10-32, 176-198, 213-235, 304-326, 346-365, 460-482 and 497-519; Signal peptide predicted for TA18155 by SignalP 2.0 HMM (Signal peptide probability 0.731, signal anchor probability 0.116) with cleavage site probability 0.386 between residues 26 and 27
Signal peptide predicted for TA18155 by SignalP 2.0 HMM (Signal peptide probability 0.731, signal anchor probability 0.116) with cleavage site probability 0.386 between residues 26 and 27
small GTP-binding protein Rab1, putative
Signal anchor predicted for TA18200 by SignalP 2.0 HMM (Signal peptide probability 0.177, signal anchor probability 0.764) with cleavage site probability 0.103 between residues 22 and 23
Contains putative signal peptide; contains 11 putative transmembrane domains; 12 probable transmembrane helices predicted for TA18210 by TMHMM2.0 at aa 25-47, 76-95, 102-124, 129-151, 216-238, 265-287, 308-330, 345-367, 549-571, 1348-1366, 1474-1496 and 1511-1533; Signal anchor predicted for TA18210 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 0.994) with cleavage site probability 0.000 between residues 49 and 50
Signal anchor predicted for TA18210 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 0.994) with cleavage site probability 0.000 between residues 49 and 50
Significant Pfam hit (5.8e-27) to Patatin-like phospholipase domain; contains putative signal peptide
eukaryotic translation initiation factor 3 subunit 7, putative
Similar to several prokaryotic ATP-dependent RNA helicases
Contains 2 putative transmembrane domains; 2 probable transmembrane helices predicted for TA18250 by TMHMM2.0 at aa 50-72 and 79-98
2 probable transmembrane helices predicted for TA18250 by TMHMM2.0 at aa 50-72 and 79-98
cytidine and deoxycytidylate deaminase family protein, putative
Moderate Pfam hit (5.7e-09) cytidine deaminase domain
Shows Pfam hit (3.56e-05) to MACPF domain at the C-terminal end; the first 13 exons of the protein could be part of a separate hypothetical protein
4-hydroxybenzoate octaprenyltransferase, putative
4 probable transmembrane helices predicted for TA18290 by TMHMM2.0 at aa 109-131, 231-248, 311-333 and 354-373
Signal peptide predicted for TA18295 by SignalP 2.0 HMM (Signal peptide probability 0.955, signal anchor probability 0.000) with cleavage site probability 0.883 between residues 19 and 20
2 probable transmembrane helices predicted for TA18300 by TMHMM2.0 at aa 28-50 and 155-177; Signal anchor predicted for TA18300 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 0.681) with cleavage site probability 0.000 between residues 46 and 47
Signal anchor predicted for TA18300 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 0.681) with cleavage site probability 0.000 between residues 46 and 47
2 probable transmembrane helices predicted for TA18300 by TMHMM2.0 at aa 28-50 and 155-177
proteasome subunit alpha type 2, putative
elongation factor g 1, mitochondrial precursor
tgf beta-inducible nuclear protein(TNP-1) 1, putative
Signal peptide predicted for TA18363 by SignalP 2.0 HMM (Signal peptide probability 0.960, signal anchor probability 0.000) with cleavage site probability 0.523 between residues 21 and 22
3 probable transmembrane helices predicted for TA18390 by TMHMM2.0 at aa 1009-1031, 1090-1112 and 1116-1138
Theileria-specific hypothetical membrane protein, putative
Contains 7 possible transmembrane domains; 7 probable transmembrane helices predicted for TA18395 by TMHMM2.0 at aa 1296-1318, 1345-1367, 1377-1394, 1420-1442, 1457-1476, 1496-1518 and 1798-1817
Contains possible KOW-like repeat elements
Contains 1 putative transmembrane domain; Apicoplast targetting peptide predicted by the PlasmoAP tool; 1 probable transmembrane helix predicted for TA18420 by TMHMM2.0 at aa 7-29; Signal peptide predicted for TA18420 by SignalP 2.0 HMM (Signal peptide probability 0.786, signal anchor probability 0.112) with cleavage site probability 0.435 between residues 29 and 30
Signal peptide predicted for TA18420 by SignalP 2.0 HMM (Signal peptide probability 0.786, signal anchor probability 0.112) with cleavage site probability 0.435 between residues 29 and 30
1 probable transmembrane helix predicted for TA18420 by TMHMM2.0 at aa 7-29
2 probable transmembrane helices predicted for TA18430 by TMHMM2.0 at aa 21-43 and 63-80; GPI-Anchor Signal predicted for TA18430 by DGPI v2.04, no cleavage site predicted
2 probable transmembrane helices predicted for TA18430 by TMHMM2.0 at aa 21-43 and 63-80
Contains 3 putative transmembrane domains; 3 probable transmembrane helices predicted for TA18435 by TMHMM2.0 at aa 692-714, 946-968 and 1017-1039
3 probable transmembrane helices predicted for TA18435 by TMHMM2.0 at aa 692-714, 946-968 and 1017-1039
3 probable transmembrane helices predicted for TA18440 by TMHMM2.0 at aa 866-888, 931-953 and 2259-2281
Contains 12 putative transmembrane domains; Apicoplast targetting peptide predicted by the PlasmoAP tool; 12 probable transmembrane helices predicted for TA18450 by TMHMM2.0 at aa 10-29, 160-177, 182-204, 216-234, 249-268, 275-297, 338-360, 517-536, 546-568, 602-624, 653-675 and 716-738; Signal anchor predicted for TA18450 by SignalP 2.0 HMM (Signal peptide probability 0.029, signal anchor probability 0.970) with cleavage site probability 0.012 between residues 27 and 28
Signal anchor predicted for TA18450 by SignalP 2.0 HMM (Signal peptide probability 0.029, signal anchor probability 0.970) with cleavage site probability 0.012 between residues 27 and 28
Contains 2 putative transmembrane domains; 2 probable transmembrane helices predicted for TA18460 by TMHMM2.0 at aa 315-337 and 358-380
2 probable transmembrane helices predicted for TA18460 by TMHMM2.0 at aa 315-337 and 358-380
serine/threonine-protein kinase, putative
Histone-like transcription factor, putative
Significant Pfam hit (1.1e-31) to Histone-like transcription factor domain
SMART 2 transmembrane domains at aa 24-46 and 66-85; 2 probable transmembrane helices predicted for TA17470 by TMHMM2.0 at aa 25-47 and 62-84
2 probable transmembrane helices predicted for TA17470 by TMHMM2.0 at aa 25-47 and 62-84
note; Tap-921d01.p1c.C.cand.2 - score = 47.74
note; Tap-921d01.p1c.C.cand.3 - score = 20.45
note; Tap-921d01.p1c.C.cand.4 - score = 32.18; SMART 1 transmembrane domain at aa 5-27; 1 probable transmembrane helix predicted for TA17450 by TMHMM2.0 at aa 5-27; Signal peptide predicted for TA17450 by SignalP 2.0 HMM (Signal peptide probability 0.640, signal anchor probability 0.323) with cleavage site probability 0.265 between residues 23 and 24
Signal peptide predicted for TA17450 by SignalP 2.0 HMM (Signal peptide probability 0.640, signal anchor probability 0.323) with cleavage site probability 0.265 between residues 23 and 24
1 probable transmembrane helix predicted for TA17450 by TMHMM2.0 at aa 5-27
note; Tap-921d01.p1c.cand.12 - score = 49.89; Apicoplast targetting peptide predicted by the PlasmoAP tool; 1 probable transmembrane helix predicted for TA17445 by TMHMM2.0 at aa 7-26; Signal anchor predicted for TA17445 by SignalP 2.0 HMM (Signal peptide probability 0.238, signal anchor probability 0.762) with cleavage site probability 0.096 between residues 23 and 24
1 probable transmembrane helix predicted for TA17445 by TMHMM2.0 at aa 7-26
Signal anchor predicted for TA17445 by SignalP 2.0 HMM (Signal peptide probability 0.238, signal anchor probability 0.762) with cleavage site probability 0.096 between residues 23 and 24
SMART 2 transmembrane domains at aa 20-42 and 63-85; 2 probable transmembrane helices predicted for TA17440 by TMHMM2.0 at aa 20-42 and 63-85
2 probable transmembrane helices predicted for TA17440 by TMHMM2.0 at aa 20-42 and 63-85
note; Tap-921d01.p1c.C.cand.5 - score = 17.39
pre-protein translocase (SEC61 homologue), putative
7 probable transmembrane helices predicted for TA17425 by TMHMM2.0 at aa 22-44, 110-129, 134-156, 232-254, 274-296, 402-424 and 429-451; Signal anchor predicted for TA17425 by SignalP 2.0 HMM (Signal peptide probability 0.251, signal anchor probability 0.664) with cleavage site probability 0.120 between residues 42 and 43
Signal anchor predicted for TA17425 by SignalP 2.0 HMM (Signal peptide probability 0.251, signal anchor probability 0.664) with cleavage site probability 0.120 between residues 42 and 43
vacuolar ATP synthase (E subunit), putative
SMART 3 transmembrane domains at aa 60-78, 95-117 and 144-166; 4 probable transmembrane helices predicted for TA17410 by TMHMM2.0 at aa 28-50, 60-78, 95-117 and 144-166; Signal anchor predicted for TA17410 by SignalP 2.0 HMM (Signal peptide probability 0.001, signal anchor probability 0.994) with cleavage site probability 0.000 between residues 40 and 41
4 probable transmembrane helices predicted for TA17410 by TMHMM2.0 at aa 28-50, 60-78, 95-117 and 144-166
Signal anchor predicted for TA17410 by SignalP 2.0 HMM (Signal peptide probability 0.001, signal anchor probability 0.994) with cleavage site probability 0.000 between residues 40 and 41
note; Tap-921d01.p1c.cand.9 - score = 28.63; Signal peptide predicted for TA17405 by SignalP 2.0 HMM (Signal peptide probability 0.855, signal anchor probability 0.122) with cleavage site probability 0.567 between residues 29 and 30
Signal peptide predicted for TA17405 by SignalP 2.0 HMM (Signal peptide probability 0.855, signal anchor probability 0.122) with cleavage site probability 0.567 between residues 29 and 30
farnesyl pyrophosphate synthetase, putative
note; SMART pfam:polyprenyl_synt (PF00348) at aa 46-329, E()=2.30e-34; 1 probable transmembrane helix predicted for TA17400 by TMHMM2.0 at aa 132-154
1 probable transmembrane helix predicted for TA17400 by TMHMM2.0 at aa 132-154
multiprotein bridging factor (type 1), putative
adp-ribosylation factor (ARF homologue), putative
note; Tap-921d01.p1c.cand.6 - score = 16.14
note; Tap-921d01.p1c.C.cand.8 - score = 18.35; SMART pfam:Ribosomal_S7 domain (PF00177) at aa 40-192, E()=1.30e-59
note; Tap-921d01.p1c.cand.5 - score = 51.54; Apicoplast targetting peptide predicted by the PlasmoAP tool; 1 probable transmembrane helix predicted for TA17375 by TMHMM2.0 at aa 5-27; Signal peptide predicted for TA17375 by SignalP 2.0 HMM (Signal peptide probability 0.993, signal anchor probability 0.004) with cleavage site probability 0.950 between residues 20 and 21
1 probable transmembrane helix predicted for TA17375 by TMHMM2.0 at aa 5-27
Signal peptide predicted for TA17375 by SignalP 2.0 HMM (Signal peptide probability 0.993, signal anchor probability 0.004) with cleavage site probability 0.950 between residues 20 and 21
(subtelomeric) ABC-transporter protein family member, putative
note; Tap299b01.p1c.C.cand.3 - score = 38.03
Theileria-specific sub-telomeric protein, SVSP family
note; Tap299b01.p1c.C.cand.4 - score = 35.14; Signal peptide predicted for TA05570 by SignalP 2.0 HMM (Signal peptide probability 0.738, signal anchor probability 0.077) with cleavage site probability 0.648 between residues 21 and 22
Signal peptide predicted for TA05570 by SignalP 2.0 HMM (Signal peptide probability 0.738, signal anchor probability 0.077) with cleavage site probability 0.648 between residues 21 and 22
Tap299b01.p1c.C.cand.4 - score = 35.14; Signal peptide predicted for TA05565 by SignalP 2.0 HMM (Signal peptide probability 0.830, signal anchor probability 0.000) with cleavage site probability 0.810 between residues 21 and 22
Signal peptide predicted for TA05565 by SignalP 2.0 HMM (Signal peptide probability 0.830, signal anchor probability 0.000) with cleavage site probability 0.810 between residues 21 and 22
note; Tap299b01.p1c.C.cand.5 - score = 31.36; Signal anchor predicted for TA05560 by SignalP 2.0 HMM (Signal peptide probability 0.189, signal anchor probability 0.701) with cleavage site probability 0.120 between residues 24 and 25
Signal anchor predicted for TA05560 by SignalP 2.0 HMM (Signal peptide probability 0.189, signal anchor probability 0.701) with cleavage site probability 0.120 between residues 24 and 25
note; Tap299b01.p1c.C.cand.5 - score = 31.36; Signal anchor predicted for TA05555 by SignalP 2.0 HMM (Signal peptide probability 0.189, signal anchor probability 0.701) with cleavage site probability 0.120 between residues 24 and 25
Signal anchor predicted for TA05555 by SignalP 2.0 HMM (Signal peptide probability 0.189, signal anchor probability 0.701) with cleavage site probability 0.120 between residues 24 and 25
note; Tap299b01.p1c.C.cand.6 - score = 16.17; Signal peptide predicted for TA05550 by SignalP 2.0 HMM (Signal peptide probability 0.710, signal anchor probability 0.000) with cleavage site probability 0.642 between residues 22 and 23
Signal peptide predicted for TA05550 by SignalP 2.0 HMM (Signal peptide probability 0.710, signal anchor probability 0.000) with cleavage site probability 0.642 between residues 22 and 23
note; Tap299b01.p1c.C.cand.7 - score = 33.48
note; Tap299b01.p1c.C.cand.8 - score = 11.92; Signal peptide predicted for TA05540 by SignalP 2.0 HMM (Signal peptide probability 0.893, signal anchor probability 0.000) with cleavage site probability 0.809 between residues 18 and 19
Signal peptide predicted for TA05540 by SignalP 2.0 HMM (Signal peptide probability 0.893, signal anchor probability 0.000) with cleavage site probability 0.809 between residues 18 and 19
Tap299b01.p1c.C.cand.10 - score = 187.97; Signal peptide predicted for TA05530 by SignalP 2.0 HMM (Signal peptide probability 0.980, signal anchor probability 0.000) with cleavage site probability 0.910 between residues 25 and 26
Signal peptide predicted for TA05530 by SignalP 2.0 HMM (Signal peptide probability 0.980, signal anchor probability 0.000) with cleavage site probability 0.910 between residues 25 and 26