Theileria annulata chromosome 2, complete sequence, *** SEQUENCING IN PROGRESS ***.
Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Piroplasmida; Theileriidae; Theileria.
Genome of the host-cell transforming parasite Theileria annulata compared with T. parva
Submitted (29-JAN-2021) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA
Submitted (31-MAR-2005) The Wellcome Trust Sanger Institute Genome Campus, Hinxton, Cambridge CB10 1SA, UK
PROVISIONAL REFSEQ: This record has not yet been subject to final\nNCBI review. The reference sequence is identical to CR940348.\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: INSDC submitter\nAnnotation Status :: Full annotation\nAnnotation Pipeline :: Eukaryotic Annotation Propagation Pipeline\n##Genome-Annotation-Data-END##\n* NOTE: This is a 'working draft' sequence. It currently\n* consists of 1 contigs. Gaps between the contigs\n* are represented as runs of N. The order of the pieces\n* is believed to be correct as given, however the sizes\n* of the gaps between them are based on estimates that have\n* provided by the submitter.\n* This sequence will be replaced\n* by the finished sequence as soon as it is available and\n* the accession number will be preserved.\n* 1 1979170: contig of 1979170 bp in length.
SfiI-subtelomeric fragment related protein family member, putative
chr2.cand.535 - hypothetical temomere family protein; Signal peptide predicted for TA16055 by SignalP 2.0 HMM (Signal peptide probability 0.975, signal anchor probability 0.000) with cleavage site probability 0.696 between residues 25 and 26
Signal peptide predicted for TA16055 by SignalP 2.0 HMM (Signal peptide probability 0.975, signal anchor probability 0.000) with cleavage site probability 0.696 between residues 25 and 26
chr2.cand.534 - signal peptide; Signal peptide predicted for TA16050 by SignalP 2.0 HMM (Signal peptide probability 0.977, signal anchor probability 0.000) with cleavage site probability 0.682 between residues 25 and 26
Signal peptide predicted for TA16050 by SignalP 2.0 HMM (Signal peptide probability 0.977, signal anchor probability 0.000) with cleavage site probability 0.682 between residues 25 and 26
Theileria-specific sub-telomeric protein, SVSP family, putative
chr2.cand.533 - signal peptide, telomere P,Q-rich family; signal peptide, telomere P,Q-rich family; Signal peptide predicted for TA16045 by SignalP 2.0 HMM (Signal peptide probability 0.931, signal anchor probability 0.049) with cleavage site probability 0.901 between residues 20 and 21
Signal peptide predicted for TA16045 by SignalP 2.0 HMM (Signal peptide probability 0.931, signal anchor probability 0.049) with cleavage site probability 0.901 between residues 20 and 21
chr2.cand.532 - signal peptide, telomere P,Q-rich family; signal peptide, telomere P,Q-rich family; Signal peptide predicted for TA16040 by SignalP 2.0 HMM (Signal peptide probability 0.915, signal anchor probability 0.000) with cleavage site probability 0.699 between residues 20 and 21
Signal peptide predicted for TA16040 by SignalP 2.0 HMM (Signal peptide probability 0.915, signal anchor probability 0.000) with cleavage site probability 0.699 between residues 20 and 21
chr2.cand.531 - signal peptide, telomere P,Q-rich family
chr2.cand.530 -signal peptide, telomere P,Q-rich family; signal peptide, telomere P,Q-rich family; Signal peptide predicted for TA16030 by SignalP 2.0 HMM (Signal peptide probability 0.780, signal anchor probability 0.065) with cleavage site probability 0.687 between residues 21 and 22
Signal peptide predicted for TA16030 by SignalP 2.0 HMM (Signal peptide probability 0.780, signal anchor probability 0.065) with cleavage site probability 0.687 between residues 21 and 22
chr2.cand.529 - signal peptide, telomere P,Q-rich family; signal peptide, telomere P,Q-rich family; Signal peptide predicted for TA16025 by SignalP 2.0 HMM (Signal peptide probability 0.935, signal anchor probability 0.000) with cleavage site probability 0.723 between residues 18 and 19
Signal peptide predicted for TA16025 by SignalP 2.0 HMM (Signal peptide probability 0.935, signal anchor probability 0.000) with cleavage site probability 0.723 between residues 18 and 19
chr2.cand.528 - signal peptide; secreted protein, putative; Signal peptide predicted for TA16020 by SignalP 2.0 HMM (Signal peptide probability 0.986, signal anchor probability 0.013) with cleavage site probability 0.808 between residues 23 and 24
Signal peptide predicted for TA16020 by SignalP 2.0 HMM (Signal peptide probability 0.986, signal anchor probability 0.013) with cleavage site probability 0.808 between residues 23 and 24
(subtelomeric) ABC-transporter protein family member, putative
chr2.cand.527 - signal peptide, hypothetical protein; secreted protein, putative; 1 probable transmembrane helix predicted for TA16010 by TMHMM2.0 at aa 7-29; Signal peptide predicted for TA16010 by SignalP 2.0 HMM (Signal peptide probability 0.901, signal anchor probability 0.078) with cleavage site probability 0.606 between residues 22 and 23
1 probable transmembrane helix predicted for TA16010 by TMHMM2.0 at aa 7-29
Signal peptide predicted for TA16010 by SignalP 2.0 HMM (Signal peptide probability 0.901, signal anchor probability 0.078) with cleavage site probability 0.606 between residues 22 and 23
signal peptide, transmembrane protein; transmembrane protein, putative; 1 probable transmembrane helix predicted for TA16005 by TMHMM2.0 at aa 405-426; Signal peptide predicted for TA16005 by SignalP 2.0 HMM (Signal peptide probability 0.961, signal anchor probability 0.000) with cleavage site probability 0.872 between residues 18 and 19; GPI-Anchor Signal predicted for TA16005 by DGPI v2.04, no cleavage site predicted
1 probable transmembrane helix predicted for TA16005 by TMHMM2.0 at aa 405-426
Signal peptide predicted for TA16005 by SignalP 2.0 HMM (Signal peptide probability 0.961, signal anchor probability 0.000) with cleavage site probability 0.872 between residues 18 and 19
chr2.cand.525 - 40s ribosomal protein s8
all_bases.C.cand.1316 - hypothetical protein
all_bases.cand.525 - hypothetical protein
serine/threonine protein phosphatase, putative
all_bases.C.cand.1317 - serine/threonine protein phosphatase
chr2.C.cand.8 - CPDc catalytic domain of ctd-like phosphatases
chr2.C.cand.9 - signal peptide, transmembrane domains; transmembrane protein, putative; 9 probable transmembrane helices predicted for TA15965 by TMHMM2.0 at aa 29-51, 66-85, 92-111, 121-143, 155-174, 189-211, 322-344, 349-371 and 408-430
aldo-keto reductase family protein, putative
all_bases.cand.524 - signal peptide, PF00248 Aldo/keto reductase family; Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal peptide predicted for TA15960 by SignalP 2.0 HMM (Signal peptide probability 0.705, signal anchor probability 0.003) with cleavage site probability 0.191 between residues 23 and 24
Signal peptide predicted for TA15960 by SignalP 2.0 HMM (Signal peptide probability 0.705, signal anchor probability 0.003) with cleavage site probability 0.191 between residues 23 and 24
chr2.C.cand.10 - possible signal peptide; secreted protein, putative
glucosamine--fructose-6-phosphate aminotransferase, putative
chr2.cand.517 - glucosamine--fructose-6-phosphate aminotransferase
chr2.C.cand.13 - calcium binding protein; calcium binding protein
RNA binding protein (nil per os homologue), putative
all_bases.cand.519 - RNA binding protein; 1 probable transmembrane helix predicted for TA15920 by TMHMM2.0 at aa 52-74
1 probable transmembrane helix predicted for TA15920 by TMHMM2.0 at aa 52-74
chr2.C.cand.14 - hypothetical transmembrane protein, conserved; 4 probable transmembrane helices predicted for TA15910 by TMHMM2.0 at aa 1120-1142, 1162-1184, 1204-1226 and 1283-1305; Signal peptide predicted for TA15910 by SignalP 2.0 HMM (Signal peptide probability 0.644, signal anchor probability 0.000) with cleavage site probability 0.290 between residues 26 and 27
Signal peptide predicted for TA15910 by SignalP 2.0 HMM (Signal peptide probability 0.644, signal anchor probability 0.000) with cleavage site probability 0.290 between residues 26 and 27
4 probable transmembrane helices predicted for TA15910 by TMHMM2.0 at aa 1120-1142, 1162-1184, 1204-1226 and 1283-1305
proteasome subunit alpha type 1, putative
chr2.cand.511 - metallo-protease; 5 probable transmembrane helices predicted for TA15895 by TMHMM2.0 at aa 94-116, 126-148, 168-190, 205-224 and 358-380
5 probable transmembrane helices predicted for TA15895 by TMHMM2.0 at aa 94-116, 126-148, 168-190, 205-224 and 358-380
chr2.cand.510 - metalloprotease; 6 probable transmembrane helices predicted for TA15890 by TMHMM2.0 at aa 10-32, 85-107, 172-194, 201-220, 305-324 and 337-359
6 probable transmembrane helices predicted for TA15890 by TMHMM2.0 at aa 10-32, 85-107, 172-194, 201-220, 305-324 and 337-359
chr2.cand.509 - proteasome subunit alpha type 1
chr2.cand.508 - metallo-protease; 4 probable transmembrane helices predicted for TA15870 by TMHMM2.0 at aa 126-148, 168-190, 205-227 and 359-381
4 probable transmembrane helices predicted for TA15870 by TMHMM2.0 at aa 126-148, 168-190, 205-227 and 359-381
phosphoacetylglucosamine mutase, putative
chr2.C.cand.15 - hypothetical protein, some sim. to phosphoacetylglucosamine mutase
chr2.cand.507 - signal peptide, hypothetical protein; secreted protein, putative
prenylated protein, putative; chr2.cand.506 - prenylated protein, putative
chr2.cand.505 - PF01142 uncharacterized protein family UPF0024; uncharacterized protein family UPF0024
chr2.cand.504 - possible signal peptide, conserved hypothetical protein; secreted protein, putative
apoptosis inhibitor, Bax-1 homologue, putative
all_bases.cand.508 - PF01027 Uncharacterised protein family UPF0005; 7 probable transmembrane helices predicted for TA15840 by TMHMM2.0 at aa 36-53, 57-79, 91-109, 119-141, 148-170, 174-193 and 209-231
zinc finger protein, putative; chr2.cand.502 - zinc finger protein
chr2.cand.501 - score = 18.43 PF01226 formate/nitrate transporter; 6 probable transmembrane helices predicted for TA15830 by TMHMM2.0 at aa 37-59, 69-91, 112-134, 164-186, 193-215 and 241-263
6 probable transmembrane helices predicted for TA15830 by TMHMM2.0 at aa 37-59, 69-91, 112-134, 164-186, 193-215 and 241-263
chr2.C.cand.17 - PF00004 ATPase family associated with various cellular activities (AAA)
hypothetical protein, PF00226 DnaJ domain; small overlap at the 5' end with gene TA15805
small overlap at the 3' end with gene TA15810
all_bases.C.cand.1327 - signal peptide, transmembrane; transmembrane protein, putative; 4 probable transmembrane helices predicted for TA15795 by TMHMM2.0 at aa 13-35, 39-56, 63-82 and 102-121
4 probable transmembrane helices predicted for TA15795 by TMHMM2.0 at aa 13-35, 39-56, 63-82 and 102-121
chr2.C.cand.19 - ran binding protein, PF00641, Zn finger in Ran binding protein and others
all_bases.C.cand.1330 - mono-oxygenase, PF01494 FAD binding domain, PF01360 Monooxygenase; 1 probable transmembrane helix predicted for TA15760 by TMHMM2.0 at aa 7-26; Signal anchor predicted for TA15760 by SignalP 2.0 HMM (Signal peptide probability 0.062, signal anchor probability 0.696) with cleavage site probability 0.025 between residues 35 and 36
Signal anchor predicted for TA15760 by SignalP 2.0 HMM (Signal peptide probability 0.062, signal anchor probability 0.696) with cleavage site probability 0.025 between residues 35 and 36
1 probable transmembrane helix predicted for TA15760 by TMHMM2.0 at aa 7-26
chr2.cand.495 - signal peptide, transmembrane; transmembrane protein, putative; Apicoplast targetting peptide predicted by the PlasmoAP tool; 2 probable transmembrane helices predicted for TA15745 by TMHMM2.0 at aa 7-26 and 528-547; Signal anchor predicted for TA15745 by SignalP 2.0 HMM (Signal peptide probability 0.023, signal anchor probability 0.937) with cleavage site probability 0.009 between residues 17 and 18
2 probable transmembrane helices predicted for TA15745 by TMHMM2.0 at aa 7-26 and 528-547
Signal anchor predicted for TA15745 by SignalP 2.0 HMM (Signal peptide probability 0.023, signal anchor probability 0.937) with cleavage site probability 0.009 between residues 17 and 18
chr2.C.cand.24 - PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase
chr2.cand.492 - signal peptide; secreted protein, putative
chr2.cand.491 - signal peptide; secreted protein, putative; Signal peptide predicted for TA15705 by SignalP 2.0 HMM (Signal peptide probability 0.600, signal anchor probability 0.030) with cleavage site probability 0.264 between residues 18 and 19
Signal peptide predicted for TA15705 by SignalP 2.0 HMM (Signal peptide probability 0.600, signal anchor probability 0.030) with cleavage site probability 0.264 between residues 18 and 19
26S proteasome ATPase subunit (Rpt6A homologue), putative
chr2.cand.490 - AAA-ATPase, proteasome subunit
chr2.cand.489 - signal peptide; secreted ptotein
chr2.cand.488 - signal peptide; secreted protein, putative
chr2.cand.487 - signal peptide; secreted protein, putative
chr2.C.cand.29 - hypothetical protein, PF00481 Protein phosphatase 2C domain; PF00481 Protein phosphatase 2C domain
cathepsin-like cysteine protease, putative
chr2.C.cand.32 - PF00112 Papain family cysteine protease; Signal peptide predicted for TA15665 by SignalP 2.0 HMM (Signal peptide probability 0.663, signal anchor probability 0.260) with cleavage site probability 0.331 between residues 24 and 25
Signal peptide predicted for TA15665 by SignalP 2.0 HMM (Signal peptide probability 0.663, signal anchor probability 0.260) with cleavage site probability 0.331 between residues 24 and 25
hypothetical protein, zinc finger, conserved
hypothetical protein; Apicoplast targetting peptide predicted by the PlasmoAP tool; 3 probable transmembrane helices predicted for TA15650 by TMHMM2.0 at aa 10-32, 39-58 and 62-84; Signal anchor predicted for TA15650 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 0.997) with cleavage site probability 0.000 between residues 37 and 38
3 probable transmembrane helices predicted for TA15650 by TMHMM2.0 at aa 10-32, 39-58 and 62-84
Signal anchor predicted for TA15650 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 0.997) with cleavage site probability 0.000 between residues 37 and 38
chr2.C.cand.36 - hypothetical protein, conserved
chr2.C.cand.37 - hypothetical protein; 2 probable transmembrane helices predicted for TA15635 by TMHMM2.0 at aa 91-109 and 239-261
2 probable transmembrane helices predicted for TA15635 by TMHMM2.0 at aa 91-109 and 239-261
hypothetical telomeric sfii fragment 8-like protein; chr2.C.cand.38 - htsf8
chr2.C.cand.39 - hypothetical protein; 2 probable transmembrane helices predicted for TA15610 by TMHMM2.0 at aa 40-62 and 72-91
2 probable transmembrane helices predicted for TA15610 by TMHMM2.0 at aa 40-62 and 72-91
hypothetical protein, conserved, pfl0490C
NADPH dependent oxidoreductase, putative
2 probable transmembrane helices predicted for TA15580 by TMHMM2.0 at aa 292-314 and 409-431
chr2.cand.475 - score = 16.68; Signal peptide predicted for TA15570 by SignalP 2.0 HMM (Signal peptide probability 1.000, signal anchor probability 0.000) with cleavage site probability 0.956 between residues 17 and 18
Signal peptide predicted for TA15570 by SignalP 2.0 HMM (Signal peptide probability 1.000, signal anchor probability 0.000) with cleavage site probability 0.956 between residues 17 and 18
PF00481 Protein phosphatase 2C, signal sequence
chr2.C.cand.41 - signal peptide, transmembrane; transmembrane protein, putative; 6 probable transmembrane helices predicted for TA15540 by TMHMM2.0 at aa 13-30, 43-65, 126-143, 153-175, 278-300 and 310-332; Signal anchor predicted for TA15540 by SignalP 2.0 HMM (Signal peptide probability 0.003, signal anchor probability 0.989) with cleavage site probability 0.002 between residues 30 and 31
Signal anchor predicted for TA15540 by SignalP 2.0 HMM (Signal peptide probability 0.003, signal anchor probability 0.989) with cleavage site probability 0.002 between residues 30 and 31
6 probable transmembrane helices predicted for TA15540 by TMHMM2.0 at aa 13-30, 43-65, 126-143, 153-175, 278-300 and 310-332
glyceraldehyde 3-phosphate dehydrogenase, putative
chr2.C.cand.43 - glyceraldehyde 3-phosphate dehydrogenase
serine/threonine protein phosphatase pp2a catalytic subunit, putative
chr2.C.cand.46 - hypothetical protein, conserved, pf11_0393
Apicoplast targetting peptide predicted by the PlasmoAP tool; 2 probable transmembrane helices predicted for TA15505 by TMHMM2.0 at aa 29-51 and 61-83; Signal anchor predicted for TA15505 by SignalP 2.0 HMM (Signal peptide probability 0.046, signal anchor probability 0.918) with cleavage site probability 0.013 between residues 46 and 47
Signal anchor predicted for TA15505 by SignalP 2.0 HMM (Signal peptide probability 0.046, signal anchor probability 0.918) with cleavage site probability 0.013 between residues 46 and 47
2 probable transmembrane helices predicted for TA15505 by TMHMM2.0 at aa 29-51 and 61-83
Tpr-related protein family member, putative
transmembrane; 2 probable transmembrane helices predicted for TA15500 by TMHMM2.0 at aa 53-75 and 931-953
2 probable transmembrane helices predicted for TA15500 by TMHMM2.0 at aa 53-75 and 931-953
3 probable transmembrane helices predicted for TA15490 by TMHMM2.0 at aa 7-29, 33-51 and 72-94; GPI-Anchor Signal predicted for TA15490 by DGPI v2.04 with cleavage site probability 2.4940002 near 97
3 probable transmembrane helices predicted for TA15490 by TMHMM2.0 at aa 7-29, 33-51 and 72-94
GPI-Anchor Signal predicted for TA15490 by DGPI v2.04 with cleavage site probability 2.4940002 near 97
chr2.cand.466 - hypothetical protein, transmembrane; 2 probable transmembrane helices predicted for TA15485 by TMHMM2.0 at aa 95-117 and 170-187
2 probable transmembrane helices predicted for TA15485 by TMHMM2.0 at aa 95-117 and 170-187
signal peptide, transmembrane; 4 probable transmembrane helices predicted for TA15480 by TMHMM2.0 at aa 7-29, 44-66, 129-151 and 171-193
4 probable transmembrane helices predicted for TA15480 by TMHMM2.0 at aa 7-29, 44-66, 129-151 and 171-193
small overlap at the 3' end with gene TA15465
small overlap at the 3' end with gene TA15470
all_bases.C.cand.1354 - hypothetical protein, signal peptide, transmembrane; 1 probable transmembrane helix predicted for TA15460 by TMHMM2.0 at aa 152-174
1 probable transmembrane helix predicted for TA15460 by TMHMM2.0 at aa 152-174
all_bases.cand.476 - hypothetical protein
chr2.C.cand.52 - hypothetical protein, signal peptide; Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal peptide predicted for TA15450 by SignalP 2.0 HMM (Signal peptide probability 0.676, signal anchor probability 0.000) with cleavage site probability 0.375 between residues 21 and 22; GPI-Anchor Signal predicted for TA15450 by DGPI v2.04, no cleavage site predicted
Signal peptide predicted for TA15450 by SignalP 2.0 HMM (Signal peptide probability 0.676, signal anchor probability 0.000) with cleavage site probability 0.375 between residues 21 and 22
subunit of proteaseome activator complex, putative
PF02252 Proteasome activator pa28 beta subunit
1 probable transmembrane helix predicted for TA15425 by TMHMM2.0 at aa 5-27
chr2.cand.454 - DNA primase small subunit; chr2.cand.455 - score = 10.85
chr2.cand.453 - hypothetical protein, low similarity to ss-binding protein; Signal peptide predicted for TA15415 by SignalP 2.0 HMM (Signal peptide probability 0.996, signal anchor probability 0.000) with cleavage site probability 0.427 between residues 18 and 19
Signal peptide predicted for TA15415 by SignalP 2.0 HMM (Signal peptide probability 0.996, signal anchor probability 0.000) with cleavage site probability 0.427 between residues 18 and 19
chr2.C.cand.53 - PF00025 ADP-ribosylation factor family
1 probable transmembrane helix predicted for TA15405 by TMHMM2.0 at aa 58-80
1 probable transmembrane helix predicted for TA15405 by TMHMM2.0
chr2.C.cand.54 - myb/SANT DNA binding motifs; DNA-binding protein, putative; 1 probable transmembrane helix predicted for TA15395 by TMHMM2.0 at aa 7-29
1 probable transmembrane helix predicted for TA15395 by TMHMM2.0 at aa 7-29
1 probable transmembrane helix predicted for TA15390 by TMHMM2.0 at aa 209-231
CDP-diacylglycerol-inositol 3-phosphatidyltransferase, putative
chr2.C.cand.55 - PF01066 CDP-alcohol phosphatidyltransferase; 4 probable transmembrane helices predicted for TA15380 by TMHMM2.0 at aa 20-42, 91-113, 140-162 and 182-201
4 probable transmembrane helices predicted for TA15380 by TMHMM2.0 at aa 20-42, 91-113, 140-162 and 182-201
CTP:phosphorylcholine cytidylyltransferase, putative
chr2.cand.450 - score = 34.02; 1 probable transmembrane helix predicted for TA15345 by TMHMM2.0 at aa 512-534
1 probable transmembrane helix predicted for TA15345 by TMHMM2.0 at aa 512-534
1 probable transmembrane helix predicted for TA15340 by TMHMM2.0 at aa 15-36; Signal anchor predicted for TA15340 by SignalP 2.0 HMM (Signal peptide probability 0.003, signal anchor probability 0.721) with cleavage site probability 0.001 between residues 31 and 32
Signal anchor predicted for TA15340 by SignalP 2.0 HMM (Signal peptide probability 0.003, signal anchor probability 0.721) with cleavage site probability 0.001 between residues 31 and 32
1 probable transmembrane helix predicted for TA15340 by TMHMM2.0 at aa 15-36
ubiquitin carboxyl-terminal hydrolase, putative
all_bases.cand.1290 - ubiquitin carboxyl-terminal hydrolase, zinc finger
chr2.C.cand.61 - rna binding protein; SR protein, putative
hypothetical protein; 1 probable transmembrane helix predicted for TA15325 by TMHMM2.0 at aa 785-807
1 probable transmembrane helix predicted for TA15325 by TMHMM2.0 at aa 785-807
2 probable transmembrane helices predicted for TA15315 by TMHMM2.0 at aa 50-72 and 93-115
chr2.C.cand.63 - score = 25.02; 1 probable transmembrane helix predicted for TA15310 by TMHMM2.0 at aa 249-271
1 probable transmembrane helix predicted for TA15310 by TMHMM2.0 at aa 249-271
chr2.C.cand.64 - signal peptide; Signal peptide predicted for TA15305 by SignalP 2.0 HMM (Signal peptide probability 0.997, signal anchor probability 0.002) with cleavage site probability 0.635 between residues 22 and 23
Signal peptide predicted for TA15305 by SignalP 2.0 HMM (Signal peptide probability 0.997, signal anchor probability 0.002) with cleavage site probability 0.635 between residues 22 and 23
chr2.cand.448 - signal peptide; secreted protein, putative; Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal peptide predicted for TA15285 by SignalP 2.0 HMM (Signal peptide probability 0.912, signal anchor probability 0.000) with cleavage site probability 0.880 between residues 15 and 16
Signal peptide predicted for TA15285 by SignalP 2.0 HMM (Signal peptide probability 0.912, signal anchor probability 0.000) with cleavage site probability 0.880 between residues 15 and 16
hypothetical protein, conserved, mal13p1.159
chr2.C.cand.69 - signal peptide; secreted protein, putative; 1 probable transmembrane helix predicted for TA15265 by TMHMM2.0 at aa 12-29; Signal peptide predicted for TA15265 by SignalP 2.0 HMM (Signal peptide probability 0.952, signal anchor probability 0.047) with cleavage site probability 0.555 between residues 34 and 35
Signal peptide predicted for TA15265 by SignalP 2.0 HMM (Signal peptide probability 0.952, signal anchor probability 0.047) with cleavage site probability 0.555 between residues 34 and 35
1 probable transmembrane helix predicted for TA15265 by TMHMM2.0 at aa 12-29
farnesyltransferase beta subunit, putative
chr2.cand.447 - farnesyltransferase beta subunit
chr2.C.cand.71 - hypothetical protein, PF03133 Tubulin-tyrosine ligase family
chr2.cand.445 - score = 6.38; 1 probable transmembrane helix predicted for TA15235 by TMHMM2.0 at aa 10-32
1 probable transmembrane helix predicted for TA15235 by TMHMM2.0 at aa 10-32
nucleolar, RNA-binding protein, putative
chr2.cand.442 - hypothetical protein, conserved, pfe1175W
ATP synthase subunit C, mitochondrial, putative
chr2.cand.441 - ATP synthase subunit C, signal peptide, mitochondrial; 2 probable transmembrane helices predicted for TA15215 by TMHMM2.0 at aa 93-115 and 135-157; GPI-Anchor Signal predicted for TA15215 by DGPI v2.04, no cleavage site predicted
2 probable transmembrane helices predicted for TA15215 by TMHMM2.0 at aa 93-115 and 135-157
60S ribosomal subunit protein L18, putative
chr2.C.cand.74 - 60S ribosomal subunit protein l18b
chr2.cand.439 - hypothetical protein; Apicoplast targetting peptide predicted by the PlasmoAP tool; 1 probable transmembrane helix predicted for TA15195 by TMHMM2.0 at aa 217-239; Signal peptide predicted for TA15195 by SignalP 2.0 HMM (Signal peptide probability 0.910, signal anchor probability 0.000) with cleavage site probability 0.477 between residues 15 and 16
1 probable transmembrane helix predicted for TA15195 by TMHMM2.0 at aa 217-239
Signal peptide predicted for TA15195 by SignalP 2.0 HMM (Signal peptide probability 0.910, signal anchor probability 0.000) with cleavage site probability 0.477 between residues 15 and 16
small GTP-binding protein, Rab family, putative
chr2.cand.437 - hypothetical protein, conserved,mal6p1.300, PF01171 PP-loop family UPF0021
chr2.C.cand.81 - score = 6.80; 2 probable transmembrane helices predicted for TA15150 by TMHMM2.0 at aa 21-43 and 48-70; Signal anchor predicted for TA15150 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 0.829) with cleavage site probability 0.000 between residues 16 and 17
Signal anchor predicted for TA15150 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 0.829) with cleavage site probability 0.000 between residues 16 and 17
2 probable transmembrane helices predicted for TA15150 by TMHMM2.0 at aa 21-43 and 48-70
chr2.cand.433 - transmembrane; membrane protein, putative; 5 probable transmembrane helices predicted for TA15145 by TMHMM2.0 at aa 133-155, 243-265, 280-302, 309-331 and 367-389
5 probable transmembrane helices predicted for TA15145 by TMHMM2.0 at aa 133-155, 243-265, 280-302, 309-331 and 367-389
hypothetical protein, PI3Kc Phosphoinositide 3-kinase, catalytic domain; 5 probable transmembrane helices predicted for TA15125 by TMHMM2.0 at aa 198-220, 506-528, 678-700, 768-790 and 957-979
5 probable transmembrane helices predicted for TA15125 by TMHMM2.0 at aa 198-220, 506-528, 678-700, 768-790 and 957-979
all_bases.cand.1308 - similar to chromosome assembly protein
chr2.cand.429 - score = 10.05 PF01265 cytochrome c/c1 heme lyase
chr2.cand.427 - score = 63.23; 2 probable transmembrane helices predicted for TA15085 by TMHMM2.0 at aa 785-807 and 843-862
2 probable transmembrane helices predicted for TA15085 by TMHMM2.0 at aa 785-807 and 843-862
1 probable transmembrane helix predicted for TA15080 by TMHMM2.0 at aa 148-167
phosphatidylinositol/phosphatidylcholine transfer protein, putative
chr2.cand.426 - phosphatidylinositol/phosphatidylcholine transfer protein
very hypothetical protein, but gene in this region somewhere
chr2.C.cand.87 - signal peptide; secreted protein, putative; Signal peptide predicted for TA15055 by SignalP 2.0 HMM (Signal peptide probability 0.902, signal anchor probability 0.000) with cleavage site probability 0.732 between residues 17 and 18
Signal peptide predicted for TA15055 by SignalP 2.0 HMM (Signal peptide probability 0.902, signal anchor probability 0.000) with cleavage site probability 0.732 between residues 17 and 18
PF01529 DHHC zinc finger domain; Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal anchor predicted for TA15040 by SignalP 2.0 HMM (Signal peptide probabilty 0.003, signal anchor probability 0.601) with cleavage site probability 0.001 between residues 26 and 27; 2 probable transmembrane helices predicted for TA15040 by TMHMM2.0 at aa 78-100 and 120-142
2 probable transmembrane helices predicted for TA15040 by TMHMM2.0 at aa 78-100 and 120-142
ribosomal protein l7/l12, mitochondrial/apicoplast, putative
chr2.C.cand.88 - mitochondrial/apicoplast ribosomal protein l7/l12
small overlap at the 5' end with gene TA15010
small overlap at the 5' end with gene TA15015
chr2.cand.419 - hypothetical membrane protein, similarity to ATPases; 9 probable transmembrane helices predicted for TA14990 by TMHMM2.0 at aa 69-91, 101-123, 420-442, 446-468, 1082-1104, 1109-1131, 1161-1183, 1213-1235 and 1248-1267
chr2.C.cand.95 - PF00521 DNA gyrase/topoisomerase IV, subunit A; Signal peptide predicted for TA14985 by SignalP 2.0 HMM (Signal peptide probability 0.722, signal anchor probability 0.000) with cleavage site probability 0.263 between residues 22 and 23
Signal peptide predicted for TA14985 by SignalP 2.0 HMM (Signal peptide probability 0.722, signal anchor probability 0.000) with cleavage site probability 0.263 between residues 22 and 23
chr2.cand.418 - transmembrane; membrane protein, putative; 2 probable transmembrane helices predicted for TA14980 by TMHMM2.0 at aa 283-305 and 379-401
2 probable transmembrane helices predicted for TA14980 by TMHMM2.0 at aa 283-305 and 379-401
26S proteasome non-ATPase regulatory subunit 12, putative
translation initiation factor eif-1A, putative
chr2.C.cand.98 - translation initiation factor eif-1a
DNA-directed RNA polymerases I and III, 40 kDa polypeptide, putative
chr2.cand.417 - PF01000 RNA polymerase Rpb3/RpoA insert domain
chr2.C.cand.101 - hypothetical protein, signal peptide; hypothetical protein, signal peptide; Signal peptide predicted for TA14955 by SignalP 2.0 HMM (Signal peptide probability 1.000, signal anchor probability 0.000) with cleavage site probability 0.980 between residues 19 and 20
Signal peptide predicted for TA14955 by SignalP 2.0 HMM (Signal peptide probability 1.000, signal anchor probability 0.000) with cleavage site probability 0.980 between residues 19 and 20
chr2.C.cand.102 - transmembrane; membrane protein, putative; 10 probable transmembrane helices predicted for TA14950 by TMHMM2.0 at aa 21-38, 73-90, 97-119, 129-148, 155-177, 192-214, 334-353, 368-390, 403-425 and 468-490
chr2.C.cand.103 - signal peptide; secreted protein, putative; Signal peptide predicted for TA14945 by SignalP 2.0 HMM (Signal peptide probability 0.941, signal anchor probability 0.004) with cleavage site probability 0.495 between residues 20 and 21
Signal peptide predicted for TA14945 by SignalP 2.0 HMM (Signal peptide probability 0.941, signal anchor probability 0.004) with cleavage site probability 0.495 between residues 20 and 21
all_bases.cand.1326 - hypothetical protein
mitochondrial ribosomal protein S14 precursor, putative
chr2.C.cand.106 - mitochondrial ribosomal protein s14 precursor, putative
heat shock protein HSP70 homologue, putative
chr2.C.cand.107 - organellar heat shock protein, hsp70
eukaryotic peptide chain release factor, putative
chr2.C.cand.109 - eukaryotic peptide chain release factor
CPSF (cleavage and polyadenylation specific factor), subunit A, putative
all_bases.C.cand.493 - PF03178 CPSF A subunit region
chr2.cand.410 - PF00152 tRNA synthetases class II (D, K and N)
ankyrin repeat protein, putative; chr2.cand.408 - PF00023 Ankyrin repeat
chr2.C.cand.112 - score = 39.77hypothetical protein, conserved, pfe0995C
chr2.cand.407 - PF02338 OTU-like cysteine protease, not good gene model; OTU-like cysteine protease, putative
dolichol phosphate mannose synthase, putative
chr2.cand.406 - TpR-like protein; 2 probable transmembrane helices predicted for TA14840 by TMHMM2.0 at aa 21-43 and 591-613
2 probable transmembrane helices predicted for TA14840 by TMHMM2.0 at aa 21-43 and 591-613
G-beta protein, transducin-like, putative
chr2.C.cand.116 - ABC transporter; 5 probable transmembrane helices predicted for TA14825 by TMHMM2.0 at aa 54-76, 96-113, 173-195, 199-221 and 320-342
5 probable transmembrane helices predicted for TA14825 by TMHMM2.0 at aa 54-76, 96-113, 173-195, 199-221 and 320-342
all_bases.cand.1338 - PF01652 Eukaryotic initiation factor 4E
chr2.C.cand.118 - WD40 G-beta protein; G-beta protein, putative
chr2.cand.404 - transmembrane; membrane protein, putative; 8 probable transmembrane helices predicted for TA14810 by TMHMM2.0 at aa 37-56, 66-88, 124-143, 153-172, 185-207, 238-260, 320-342 and 418-437
small nuclear ribonucleoprotein, putative
chr2.cand.402 -small nuclear ribonucleoprotein
chr2.C.cand.119 - ATP-dependent RNA helicase
camp-dependent protein kinase, beta-catalytic subunit, putative
chr2.cand.401 - camp-dependent protein kinase, beta-catalytic subunit
1 probable transmembrane helix predicted for TA14780 by TMHMM2.0 at aa 49-71; Signal anchor predicted for TA14780 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 0.986) with cleavage site probability 0.000 between residues 20 and 21
Signal anchor predicted for TA14780 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 0.986) with cleavage site probability 0.000 between residues 20 and 21
1 probable transmembrane helix predicted for TA14780 by TMHMM2.0 at aa 49-71
chr2.C.cand.122 - glycerol kinase, PF00370 FGGY family of carbohydrate kinases, N-terminal domain, PF02782 FGGY family of carbohydrate kinases, C-terminal domain
chr2.cand.400 - hypothetical protein, conserved, mal13p1.260
chr2.C.cand.123 - signal peptide; hypothetical protein, signal peptide; Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal peptide predicted for TA14765 by SignalP 2.0 HMM (Signal peptide probability 0.943, signal anchor probability 0.014) with cleavage site probability 0.920 between residues 23 and 24
Signal peptide predicted for TA14765 by SignalP 2.0 HMM (Signal peptide probability 0.943, signal anchor probability 0.014) with cleavage site probability 0.920 between residues 23 and 24
all_bases.cand.1344 - hypothetical protein, conserved, mal6p1.224
chr2.cand.398 - 60S ribosomal protein L17
hypothetical protein, conserved; chr2.C.cand.124 - hypothetical protein, low similarity with mal13p1.259, membrane; 5 probable transmembrane helices predicted for TA14745 by TMHMM2.0 at aa 46-68, 81-103, 123-145, 312-334 and 360-379; GPI-Anchor Signal predicted for TA14745 by DGPI v2.04, no cleavage site predicted
5 probable transmembrane helices predicted for TA14745 by TMHMM2.0 at aa 46-68, 81-103, 123-145, 312-334 and 360-379
chr2.C.cand.125 - PF02121 Phosphatidylinositol transfer protein, PF00169 PH domain; Phosphatidylinositol transfer protein, putative
all_bases.C.cand.478 - hypothetical protein
all_bases.C.cand.477 - hypothetical protein
all_bases.cand.1347 - signal peptide, low sim. to ribosome recycling factor; hypothetical protein, signal peptide; 2 probable transmembrane helices predicted for TA14705 by TMHMM2.0 at aa 4-23 and 30-52
2 probable transmembrane helices predicted for TA14705 by TMHMM2.0 at aa 4-23 and 30-52
all_bases.cand.1348 - score = 61.69 PF01926 Gtpase of unknown function
acyl carrier protein, apicoplast, putative
all_bases.cand.1349 - acyl carrier protein, signal sequence, apicoplast, PF00550 Phosphopantetheine attachment site; Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal peptide predicted for TA14690 by SignalP 2.0 HMM (Signal peptide probability 0.974, signal anchor probability 0.006) with cleavage site probability 0.912 between residues 24 and 25
Signal peptide predicted for TA14690 by SignalP 2.0 HMM (Signal peptide probability 0.974, signal anchor probability 0.006) with cleavage site probability 0.912 between residues 24 and 25
chr2.cand.392 - signal peptide, hypothetical protein; 1 probable transmembrane helix predicted for TA14680 by TMHMM2.0 at aa 5-27
1 probable transmembrane helix predicted for TA14680 by TMHMM2.0 at aa 5-27
chr2.cand.391 - signal peptide; secreted protein, putative; Signal peptide predicted for TA14675 by SignalP 2.0 HMM (Signal peptide probability 0.987, signal anchor probability 0.000) with cleavage site probability 0.876 between residues 18 and 19
Signal peptide predicted for TA14675 by SignalP 2.0 HMM (Signal peptide probability 0.987, signal anchor probability 0.000) with cleavage site probability 0.876 between residues 18 and 19
chr2.C.cand.133 - signal peptide, hypothetical protein; 1 probable transmembrane helix predicted for TA14665 by TMHMM2.0 at aa 7-26; Signal peptide predicted for TA14665 by SignalP 2.0 HMM (Signal peptide probability 0.833, signal anchor probability 0.167) with cleavage site probability 0.353 between residues 22 and 23
Signal peptide predicted for TA14665 by SignalP 2.0 HMM (Signal peptide probability 0.833, signal anchor probability 0.167) with cleavage site probability 0.353 between residues 22 and 23
1 probable transmembrane helix predicted for TA14665 by TMHMM2.0 at aa 7-26
all_bases.cand.1352 - signal peptide, transmembrane domains; membrane protein, putative; 12 probable transmembrane helices predicted for TA14655 by TMHMM2.0 at aa 33-51, 82-101, 108-127, 131-148, 155-177, 202-224, 236-258, 278-300, 320-351, 384-403, 447-469 and 484-506
protein transport protein (SEC23 homologue), putative
chr2.C.cand.135 - protein transport protein sec23
chr2.C.cand.137 - small nuclear ribonucleoprotein
3 probable transmembrane helices predicted for TA14635 by TMHMM2.0 at aa 62-84, 145-167 and 212-234
calcium-dependent protein kinase, putative
chr2.C.cand.141 - GTPase activator, PF00566 TBC domain
chr2.cand.387 - hypothetical protein; 1 probable transmembrane helix predicted for TA14605 by TMHMM2.0 at aa 460-482
1 probable transmembrane helix predicted for TA14605 by TMHMM2.0 at aa 460-482
ubiquitin-activating enzyme E1, putative
chr2.C.cand.143 - ubiquitin-activating enzyme e1
Tax1-binding protein TRX-like protein, putative
chr2.cand.384 - transmembrane protein; membrane protein. putative; 2 probable transmembrane helices predicted for TA14580 by TMHMM2.0 at aa 218-240 and 261-283
2 probable transmembrane helices predicted for TA14580 by TMHMM2.0 at aa 218-240 and 261-283
chr2.C.cand.147 - PF01026 TatD related DNase
all_bases.cand.1363 - kinesin-like protein, kinesin motor domain
all_bases.C.cand.466 - hypothetical protein
4-diphosphocytidyl-2c-methyl-D-erythritol kinase, putative
chr2.C.cand.151 - signal peptide; Signal peptide predicted for TA14545 by SignalP 2.0 HMM (Signal peptide probability 0.950, signal anchor probability 0.005) with cleavage site probability 0.636 between residues 18 and 19
Signal peptide predicted for TA14545 by SignalP 2.0 HMM (Signal peptide probability 0.950, signal anchor probability 0.005) with cleavage site probability 0.636 between residues 18 and 19
membrane protein, putative; chr2.cand.380 - transmembrane domains; 10 probable transmembrane helices predicted for TA14540 by TMHMM2.0 at aa 32-54, 123-145, 155-177, 184-206, 221-243, 521-543, 553-575, 630-652, 672-694 and 701-723
50s ribosomal subunit protein L28, putative
chr2.cand.379 - signal peptide, apicoplast target sequence, PF00830 Ribosomal L28 family
eukaryotic translation initiation factor 2, beta, putative
chr2.cand.378 - PF01873 Domain found in IF2B/IF5
chr2.cand.378 - hypothetical protein, conserved, pfl2150C
chr2.cand.376 - hypothetical protein, conserved, pf14_0413
chr2.cand.374 - membrane protein; membrane protein; 10 probable transmembrane helices predicted for TA14490 by TMHMM2.0 at aa 28-50, 102-124, 174-193, 208-230, 358-377, 392-414, 416-438, 443-465, 477-499 and 509-531; Signal anchor predicted for TA14490 by SignalP 2.0 HMM (Signal peptide probability 0.002, signal anchor probability 0.980) with cleavage site probability 0.001 between residues 47 and 48
Signal anchor predicted for TA14490 by SignalP 2.0 HMM (Signal peptide probability 0.002, signal anchor probability 0.980) with cleavage site probability 0.001 between residues 47 and 48
chr2.cand.373 - transmembrane protein; membrane protein, putative; 11 probable transmembrane helices predicted for TA14485 by TMHMM2.0 at aa 5-23, 90-112, 119-141, 151-170, 183-205, 332-354, 367-389, 393-415, 420-442, 452-474 and 487-506
vacuolar-protein sorting-associated protein, putative
chr2.cand.371 - score = 36.55 vacuolar sorting domain
1-acylglycerol-3-phosphate O-acyltransferase, putative
chr2.C.cand.156 - signal peptide, PF01553 Acyltransferase; 1 probable transmembrane helix predicted for TA14465 by TMHMM2.0 at aa 13-35; Signal anchor predicted for TA14465 by SignalP 2.0 HMM (Signal peptide probability 0.002, signal anchor probability 0.998) with cleavage site probability 0.001 between residues 29 and 30
Signal anchor predicted for TA14465 by SignalP 2.0 HMM (Signal peptide probability 0.002, signal anchor probability 0.998) with cleavage site probability 0.001 between residues 29 and 30
1 probable transmembrane helix predicted for TA14465 by TMHMM2.0 at aa 13-35
1-hydroxy-2-methyl-2-(e)-butenyl 4-diphosphate synthase, putative
chr2.cand.370 - signal peptide, apicoplast targetting sequence, 1-hydroxy-2-methyl-2-(e)-butenyl 4-diphosphate synthase; Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal peptide predicted for TA14455 by SignalP 2.0 HMM (Signal peptide probability 0.944, signal anchor probability 0.000) with cleavage site probability 0.702 between residues 16 and 17
Signal peptide predicted for TA14455 by SignalP 2.0 HMM (Signal peptide probability 0.944, signal anchor probability 0.000) with cleavage site probability 0.702 between residues 16 and 17
citrate synthase, mitochondrial precursor, putative
chr2.cand.369 - Citrate synthase, mitochondrial precursor
serine/threonine protein kinase, putative
chr2.C.cand.157 - serine/threonine protein kinase
mitotic checkpoint protein, BUB3 homologue, putative
all_bases.cand.1372 - mitotic checkpoint protein, WD40 protein
transducin-like G-protein beta, putative
all_bases.C.cand.452 - beta transducin, WD40 protein
cleavage stimulation factor subunit 1, putative
chr2.C.cand.160 - cleavage stimulation factor subunit 1, WD40 domains
chr2.cand.365 - choline/ethanolamine kinase
chr2.cand.364 - PF01633 Choline/ethanolamine kinase
chr2.cand.363 - choline/ethanolamine kinase
chr2.cand.362 -choline/ethanolamine kinase
chr2.cand.361 - choline/ethanolamine kinase
chr2.cand.360 - choline/ethanolamine kinase
chr2.cand.359 - choline/ethanolamine kinase
chr2.cand.358 - transmembrane domains; membrane protein, putative; 2 probable transmembrane helices predicted for TA14370 by TMHMM2.0 at aa 55-74 and 155-177
2 probable transmembrane helices predicted for TA14370 by TMHMM2.0 at aa 55-74 and 155-177
chr2.C.cand.162 - PF00561 alpha/beta hydrolase fold
all_bases.C.cand.447 - hypothetical protein
DnaJ domain protein; chr2.cand.355 - PF00226 DnaJ domain
chr2.cand.354 - hypothetical protein; 1 probable transmembrane helix predicted for TA14340 by TMHMM2.0 at aa 272-294
1 probable transmembrane helix predicted for TA14340 by TMHMM2.0 at aa 272-294
all_bases.C.cand.445 - hypothetical protein
chr2.cand.352 - hypothetical protein, conserved, mal13p1.237
chr2.cand.351 - hypothetical protein; 1 probable transmembrane helix predicted for TA14325 by TMHMM2.0 at aa 47-66; Signal anchor predicted for TA14325 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 0.983) with cleavage site probability 0.000 between residues -1 and 0
1 probable transmembrane helix predicted for TA14325 by TMHMM2.0 at aa 47-66
clathrin-coat assembly protein, putative
chr2.C.cand.165 - PF00928 Adaptor complexes medium subunit family
hypothetical protein; Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal peptide predicted for TA14310 by SignalP 2.0 HMM (Signal peptide probability 0.999, signal anchor probability 0.000) with cleavage site probability 0.860 between residues 22 and 23; GPI-Anchor Signal predicted for TA14310 by DGPI v2.04 with cleavage site probability 0.15480001 near 137
GPI-Anchor Signal predicted for TA14310 by DGPI v2.04 with cleavage site probability 0.15480001 near 137
Signal peptide predicted for TA14310 by SignalP 2.0 HMM (Signal peptide probability 0.999, signal anchor probability 0.000) with cleavage site probability 0.860 between residues 22 and 23
ubiquitin-conjugating enzyme E2, putative
chr2.cand.350 - ubiquitin-conjugating enzyme e2
chr2.cand.350 - gdp-mannose pyrophosphorylase
chr2.C.cand.166 - DnaJ domain; DnaJ domain protein, putative; 1 probable transmembrane helix predicted for TA14295 by TMHMM2.0 at aa 33-55; Signal anchor predicted for TA14295 by SignalP 2.0 HMM (Signal peptide probability 0.003, signal anchor probability 0.995) with cleavage site probability 0.003 between residues 56 and 57
Signal anchor predicted for TA14295 by SignalP 2.0 HMM (Signal peptide probability 0.003, signal anchor probability 0.995) with cleavage site probability 0.003 between residues 56 and 57
1 probable transmembrane helix predicted for TA14295 by TMHMM2.0 at aa 33-55
chr2.cand.349 - signal peptide, hypothetical protein; secreted protein, putative
chr2.cand.348 - splicing factor 3a subunit 2, putative
chr2.cand.346 - sodium/hydrogen exchanger; 11 probable transmembrane helices predicted for TA14275 by TMHMM2.0 at aa 2-24, 39-61, 68-86, 137-159, 171-193, 245-267, 293-315, 330-352, 365-382, 402-421 and 434-456; Signal peptide predicted for TA14275 by SignalP 2.0 HMM (Signal peptide probability 0.996, signal anchor probability 0.002) with cleavage site probability 0.689 between residues 26 and 27
Signal peptide predicted for TA14275 by SignalP 2.0 HMM (Signal peptide probability 0.996, signal anchor probability 0.002) with cleavage site probability 0.689 between residues 26 and 27
chr2.C.cand.167 - signal peptide, 50s ribosomal protein l22, no predicted apicoplast target sequence; Signal peptide predicted for TA14270 by SignalP 2.0 HMM (Signal peptide probability 0.993, signal anchor probability 0.000) with cleavage site probability 0.872 between residues 15 and 16
Signal peptide predicted for TA14270 by SignalP 2.0 HMM (Signal peptide probability 0.993, signal anchor probability 0.000) with cleavage site probability 0.872 between residues 15 and 16
chr2.cand.345 - hypothetical protein; GPI-Anchor Signal predicted for TA14265 by DGPI v2.04, no cleavage site predicted
ribosomal RNA assembly protein, putative
all_bases.C.cand.439 - mis3 homologue, ribosomal RNA assembly protein
small overlap at the 3' end with gene TA14245; 1 probable transmembrane helix predicted for TA14250 by TMHMM2.0 at aa 7-29; Signal peptide predicted for TA14250 by SignalP 2.0 HMM (Signal peptide probability 0.670, signal anchor probability 0.191) with cleavage site probability 0.440 between residues 22 and 23
Signal peptide predicted for TA14250 by SignalP 2.0 HMM (Signal peptide probability 0.670, signal anchor probability 0.191) with cleavage site probability 0.440 between residues 22 and 23
1 probable transmembrane helix predicted for TA14250 by TMHMM2.0 at aa 7-29
small overlap at the 3' end with gene TA14250
leu/phe-trna protein transferase, putative
all_bases.cand.1381 - leu/phe-trna protein transferase
chr2.C.cand.170 - hypothetical protein, conserved, pfb0590W, signal peptide
DnaJ protein, putative; chr2.C.cand.171 - DnaJ protein
all_bases.C.cand.436 - hypothetical protein; 2 probable transmembrane helices predicted for TA14220 by TMHMM2.0 at aa 62-84 and 149-168
2 probable transmembrane helices predicted for TA14220 by TMHMM2.0 at aa 62-84 and 149-168
chr2.C.cand.172 - hypothetical protein, signal peptide, TSP1 Thrombospondin type 1 repeat, SMART SM0209, transmembrane; membrane protein; 1 probable transmembrane helix predicted for TA14215 by TMHMM2.0 at aa 1318-1340; Signal peptide predicted for TA14215 by SignalP 2.0 HMM (Signal peptide probability 0.999, signal anchor probability 0.001) with cleavage site probability 0.426 between residues 16 and 17
Signal peptide predicted for TA14215 by SignalP 2.0 HMM (Signal peptide probability 0.999, signal anchor probability 0.001) with cleavage site probability 0.426 between residues 16 and 17
1 probable transmembrane helix predicted for TA14215 by TMHMM2.0 at aa 1318-1340
chr2.C.cand.173 - hypothetical protein, transmembrane; membrane protein, putative; Apicoplast targetting peptide predicted by the PlasmoAP tool; 4 probable transmembrane helices predicted for TA14210 by TMHMM2.0 at aa 82-101, 121-140, 147-169 and 193-215; Signal peptide predicted for TA14210 by SignalP 2.0 HMM (Signal peptide probability 0.861, signal anchor probability 0.000) with cleavage site probability 0.529 between residues 17 and 18
Signal peptide predicted for TA14210 by SignalP 2.0 HMM (Signal peptide probability 0.861, signal anchor probability 0.000) with cleavage site probability 0.529 between residues 17 and 18
4 probable transmembrane helices predicted for TA14210 by TMHMM2.0 at aa 82-101, 121-140, 147-169 and 193-215
all_bases.cand.1385 - signal sequence; secreted protein, putative; Signal peptide predicted for TA14205 by SignalP 2.0 HMM (Signal peptide probability 0.999, signal anchor probability 0.000) with cleavage site probability 0.939 between residues 19 and 20
Signal peptide predicted for TA14205 by SignalP 2.0 HMM (Signal peptide probability 0.999, signal anchor probability 0.000) with cleavage site probability 0.939 between residues 19 and 20
chr2.cand.341 - signal peptide, PF00090 Thrombospondin type 1 domain; secreted protein, putative; 1 probable transmembrane helix predicted for TA14200 by TMHMM2.0 at aa 646-665; Signal peptide predicted for TA14200 by SignalP 2.0 HMM (Signal peptide probability 0.893, signal anchor probability 0.000) with cleavage site probability 0.439 between residues 15 and 16
1 probable transmembrane helix predicted for TA14200 by TMHMM2.0 at aa 646-665
Signal peptide predicted for TA14200 by SignalP 2.0 HMM (Signal peptide probability 0.893, signal anchor probability 0.000) with cleavage site probability 0.439 between residues 15 and 16
chr2.C.cand.176 - ATP-dependent RNA helicase
chr2.C.cand.178 - you2-like c2c2 zinc finger protein
transmembrane protein, signal peptide; secreted protein, putative
transmembrane protein, signal peptide; secreted protein, putative; 2 probable transmembrane helices predicted for TA14135 by TMHMM2.0 at aa 4-26 and 83-105; Signal peptide predicted for TA14135 by SignalP 2.0 HMM (Signal peptide probability 0.861, signal anchor probability 0.032) with cleavage site probability 0.535 between residues 23 and 24
2 probable transmembrane helices predicted for TA14135 by TMHMM2.0 at aa 4-26 and 83-105
Signal peptide predicted for TA14135 by SignalP 2.0 HMM (Signal peptide probability 0.861, signal anchor probability 0.032) with cleavage site probability 0.535 between residues 23 and 24
transmembrane protein, signal peptide; secreted protein, putative; 1 probable transmembrane helix predicted for TA14130 by TMHMM2.0 at aa 622-644
1 probable transmembrane helix predicted for TA14130 by TMHMM2.0 at aa 622-644
chr2.cand.337 - hypothetical protein, similarity to T. parva fragment
chr2.C.cand.181 - hypothetical protein, histone-like
mitochondrial solute carrier-like protein, putative
all_bases.cand.1391 - GTPase of unknown function; Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal peptide predicted for TA14095 by SignalP 2.0 HMM (Signal peptide probability 0.944, signal anchor probability 0.000) with cleavage site probability 0.365 between residues 17 and 18
Signal peptide predicted for TA14095 by SignalP 2.0 HMM (Signal peptide probability 0.944, signal anchor probability 0.000) with cleavage site probability 0.365 between residues 17 and 18
T. parva transmembrane protein 17 homologue, putative
chr2.cand.333 - thioredoxin, signal sequence, transmembrane; 1 probable transmembrane helix predicted for TA14090 by TMHMM2.0 at aa 111-133
1 probable transmembrane helix predicted for TA14090 by TMHMM2.0 at aa 111-133
chr2.cand.333 - thioredoxin, signal sequence, transmembrane; 1 probable transmembrane helix predicted for TA14085 by TMHMM2.0 at aa 46-68; Signal peptide predicted for TA14085 by SignalP 2.0 HMM (Signal peptide probability 0.951, signal anchor probability 0.000) with cleavage site probability 0.316 between residues 16 and 17
1 probable transmembrane helix predicted for TA14085 by TMHMM2.0 at aa 46-68
Signal peptide predicted for TA14085 by SignalP 2.0 HMM (Signal peptide probability 0.951, signal anchor probability 0.000) with cleavage site probability 0.316 between residues 16 and 17
proliferating cell nuclear antigen 2 (PCNA2), putative
chr2.C.cand.186 - PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase
ubiquitin-like protein (NEDD8 homologue), putative
chr2.C.cand.187 - ubiquitin-like protein nedd8 homologue
U4/U6 snRNP-associated protein, putative
chr2.C.cand.191 - possible signal anchor, transmembrane protein; 11 probable transmembrane helices predicted for TA14030 by TMHMM2.0 at aa 12-34, 39-61, 68-87, 91-113, 126-148, 158-180, 234-256, 276-298, 305-322, 337-359 and 799-821; Signal anchor predicted for TA14030 by SignalP 2.0 HMM (Signal peptide probability 0.003, signal anchor probability 0.954) with cleavage site probability 0.001 between residues 25 and 26
Signal anchor predicted for TA14030 by SignalP 2.0 HMM (Signal peptide probability 0.003, signal anchor probability 0.954) with cleavage site probability 0.001 between residues 25 and 26
chr2.C.cand.193 - TLDc domain in TBC and LysM domain containing proteins
all_bases.C.cand.423 - hypothetical protein
all_bases.C.cand.422 - hypothetical protein, conserved, pfi0770C
all_bases.C.cand.421 - casein kinase ii beta chain
chr2.cand.322 - hypothetical protein; Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal peptide predicted for TA13980 by SignalP 2.0 HMM (Signal peptide probability 0.712, signal anchor probability 0.009) with cleavage site probability 0.269 between residues 19 and 20
Signal peptide predicted for TA13980 by SignalP 2.0 HMM (Signal peptide probability 0.712, signal anchor probability 0.009) with cleavage site probability 0.269 between residues 19 and 20
peptidyl-prolyl cis-trans isomerase, putative
chr2.cand.321 - hypothetical protein; Signal peptide predicted for TA13970 by SignalP 2.0 HMM (Signal peptide probability 0.608, signal anchor probability 0.000) with cleavage site probability 0.359 between residues 24 and 25
Signal peptide predicted for TA13970 by SignalP 2.0 HMM (Signal peptide probability 0.608, signal anchor probability 0.000) with cleavage site probability 0.359 between residues 24 and 25
pyrophosphate--fructose 6-phosphate 1-phosphotransferase alpha subunit, putative
chr2.C.cand.202 - membrane protein, putative; 5 probable transmembrane helices predicted for TA13940 by TMHMM2.0 at aa 81-103, 143-165, 559-581, 641-663 and 705-727
5 probable transmembrane helices predicted for TA13940 by TMHMM2.0 at aa 81-103, 143-165, 559-581, 641-663 and 705-727
chr2.cand.314 - hypothetical protein, signal peptide, apicoplast targetting sequence; hypothetical apicoplast protein
1 probable transmembrane helix predicted for TA13930 by TMHMM2.0 at aa 19-41; Signal anchor predicted for TA13930 by SignalP 2.0 HMM (Signal peptide probability 0.001, signal anchor probability 0.979) with cleavage site probability 0.000 between residues 40 and 41
Signal anchor predicted for TA13930 by SignalP 2.0 HMM (Signal peptide probability 0.001, signal anchor probability 0.979) with cleavage site probability 0.000 between residues 40 and 41
1 probable transmembrane helix predicted for TA13930 by TMHMM2.0 at aa 19-41
GPI-Anchor Signal predicted for TA13920 by DGPI v2.04, no cleavage site predicted
60S ribosomal subunit protein L4/L1, putative
chr2.C.cand.205 - PF00573 60S Ribosomal protein L4/L1 family
hypothetical protein; 8 probable transmembrane helices predicted for TA13905 by TMHMM2.0 at aa 93-115, 248-270, 282-304, 319-341, 348-370, 400-422, 474-496 and 506-525
proline synthetase associated protein, putative
chr2.C.cand.208 - PF01168 Alanine racemase, N-terminal domain UPF0001, possible proline synthetase associated protein
chr2.cand.311 - hypothetical protein; 1 probable transmembrane helix predicted for TA13890 by TMHMM2.0 at aa 993-1015
1 probable transmembrane helix predicted for TA13890 by TMHMM2.0 at aa 993-1015
chr2.C.cand.211 - hypothetical protein, signal peptide; secreted protein, putative; Signal peptide predicted for TA13885 by SignalP 2.0 HMM (Signal peptide probability 1.000, signal anchor probability 0.000) with cleavage site probability 0.976 between residues 17 and 18
Signal peptide predicted for TA13885 by SignalP 2.0 HMM (Signal peptide probability 1.000, signal anchor probability 0.000) with cleavage site probability 0.976 between residues 17 and 18
hypothetical protein, conserved, pfe0380C
membrane protein, Rhomboid family; chr2.cand.307 - PF01694 Rhomboid family - membrane protein, protease; 7 probable transmembrane helices predicted for TA13875 by TMHMM2.0 at aa 267-289, 391-413, 423-445, 452-471, 481-498, 503-520 and 600-622
chr2.cand.306 - hypothetical protein, conserved, pfi1455C
chr2.cand.305 - PF00227 proteasome A-type and B-type
GTP-binding protein, Rab-family, putative
chr2.C.cand.212 - Rab family small GTPase, signal peptide
nucleolar protein, PF01189 NOL1/NOP2/sun family
chr2.cand.303 - hypothetical protein, conserved, pfi1565W, PF00235 profilin
hypothetical protein, conserved, pfi1560C, signal peptide, transmembrane/DUF21 domain; 3 probable transmembrane helices predicted for TA13845 by TMHMM2.0 at aa 20-42, 84-103 and 110-132; Signal anchor predicted for TA13845 by SignalP 2.0 HMM (Signal peptide probability 0.089, signal anchor probability 0.836) with cleavage site probability 0.043 between residues 41 and 42
Signal anchor predicted for TA13845 by SignalP 2.0 HMM (Signal peptide probability 0.089, signal anchor probability 0.836) with cleavage site probability 0.043 between residues 41 and 42
3 probable transmembrane helices predicted for TA13845 by TMHMM2.0 at aa 20-42, 84-103 and 110-132
hypothetical protein; 1 probable transmembrane helix predicted for TA13840 by TMHMM2.0 at aa 126-148
1 probable transmembrane helix predicted for TA13840 by TMHMM2.0 at aa 126-148
chr2.C.cand.218 - signal peptide, transmembrane; 1 probable transmembrane helix predicted for TA13825 by TMHMM2.0 at aa 187-209; Signal peptide predicted for TA13825 by SignalP 2.0 HMM (Signal peptide probability 0.997, signal anchor probability 0.000) with cleavage site probability 0.719 between residues 16 and 17; GPI-Anchor Signal predicted for TA13825 by DGPI v2.04, no cleavage site predicted
Signal peptide predicted for TA13825 by SignalP 2.0 HMM (Signal peptide probability 0.997, signal anchor probability 0.000) with cleavage site probability 0.719 between residues 16 and 17
1 probable transmembrane helix predicted for TA13825 by TMHMM2.0 at aa 187-209
chr2.C.cand.219 - hypothetical protein, signal peptide, transmembrane, low similarity to ts-chitose type 23 kDa piroplasm surface protein; 1 probable transmembrane helix predicted for TA13820 by TMHMM2.0 at aa 176-198; GPI-Anchor Signal predicted for TA13820 by DGPI v2.04 with cleavage site probability 0.24939999 near 174
1 probable transmembrane helix predicted for TA13820 by TMHMM2.0 at aa 176-198
GPI-Anchor Signal predicted for TA13820 by DGPI v2.04 with cleavage site probability 0.24939999 near 174
chr2.C.cand.220 - hypothetical protein, signal peptide transmembrane, low similarity to ts-chitose type 23 kDa piroplasm surface protein; 2 probable transmembrane helices predicted for TA13815 by TMHMM2.0 at aa 4-21 and 195-212; Signal peptide predicted for TA13815 by SignalP 2.0 HMM (Signal peptide probability 0.975, signal anchor probability 0.012) with cleavage site probability 0.664 between residues 16 and 17; GPI-Anchor Signal predicted for TA13815 by DGPI v2.04, no cleavage site predicted
Signal peptide predicted for TA13815 by SignalP 2.0 HMM (Signal peptide probability 0.975, signal anchor probability 0.012) with cleavage site probability 0.664 between residues 16 and 17
2 probable transmembrane helices predicted for TA13815 by TMHMM2.0 at aa 4-21 and 195-212
ts-chitose type 23 kDa piroplasm surface-like protein, putative
chr2.C.cand.221 - ts-chitose type 23 kDa piroplasm surface protein, signal peptide, transmembrane; 1 probable transmembrane helix predicted for TA13810 by TMHMM2.0 at aa 204-226; Signal peptide predicted for TA13810 by SignalP 2.0 HMM (Signal peptide probability 0.930, signal anchor probability 0.000) with cleavage site probability 0.401 between residues 24 and 25; GPI-Anchor Signal predicted for TA13810 by DGPI v2.04, no cleavage site predicted
Signal peptide predicted for TA13810 by SignalP 2.0 HMM (Signal peptide probability 0.930, signal anchor probability 0.000) with cleavage site probability 0.401 between residues 24 and 25
1 probable transmembrane helix predicted for TA13810 by TMHMM2.0 at aa 204-226
(Lariat) debranching enzyme (dbr1 homologue), putative
PF00149 Calcineurin-like phosphoesterase
2 probable transmembrane helices predicted for TA13785 by TMHMM2.0 at aa 29-51 and 82-104; Signal anchor predicted for TA13785 by SignalP 2.0 HMM (Signal peptide probability 0.001, signal anchor probability 0.660) with cleavage site probability 0.000 between residues 47 and 48
Signal anchor predicted for TA13785 by SignalP 2.0 HMM (Signal peptide probability 0.001, signal anchor probability 0.660) with cleavage site probability 0.000 between residues 47 and 48
2 probable transmembrane helices predicted for TA13785 by TMHMM2.0 at aa 29-51 and 82-104
chr2.cand.299 - hypothetical protein, conserved, pfi1425W, some similarity to tif
GPI-Anchor Signal predicted for TA13775 by DGPI v2.04 with cleavage site probability 0.3306 near 47
chr2.cand.298 - score = 10.43; chr2.cand.298 - NADH-cytochrome b5 reductase, putative, Oxidoreductase NAD-binding domain
U1 small nuclear ribonucleoprotein 70 kDa, putative
chr2.cand.297 - u1 small nuclear ribonucleoprotein 70 kDa
chr2.C.cand.225 - hypothetical protein, signal peptide, transmembrane; membrane protein, putative; Apicoplast targetting peptide predicted by the PlasmoAP tool; 3 probable transmembrane helices predicted for TA13755 by TMHMM2.0 at aa 176-198, 285-302 and 322-344; Signal peptide predicted for TA13755 by SignalP 2.0 HMM (Signal peptide probability 0.999, signal anchor probability 0.000) with cleavage site probability 0.694 between residues 18 and 19
Signal peptide predicted for TA13755 by SignalP 2.0 HMM (Signal peptide probability 0.999, signal anchor probability 0.000) with cleavage site probability 0.694 between residues 18 and 19
3 probable transmembrane helices predicted for TA13755 by TMHMM2.0 at aa 176-198, 285-302 and 322-344
isoleucyl-trna synthetase, putative, PF00133 tRNA synthetases class I (I, L, M and V); Signal peptide predicted for TA13750 by SignalP 2.0 HMM (Signal peptide probability 0.867, signal anchor probability 0.000) with cleavage site probability 0.532 between residues 15 and 16
Signal peptide predicted for TA13750 by SignalP 2.0 HMM (Signal peptide probability 0.867, signal anchor probability 0.000) with cleavage site probability 0.532 between residues 15 and 16
chr2.C.cand.226 - hypothetical protein, conserved, pfl1195W
RNA binding protein, possible branch site protein
chr2.C.cand.227 - hypothetical protein; 1 probable transmembrane helix predicted for TA13720 by TMHMM2.0 at aa 1524-1541; Signal peptide predicted for TA13720 by SignalP 2.0 HMM (Signal peptide probability 0.993, signal anchor probability 0.000) with cleavage site probability 0.683 between residues 19 and 20; GPI-Anchor Signal predicted for TA13720 by DGPI v2.04 with cleavage site probability 0.516 near 1520
Signal peptide predicted for TA13720 by SignalP 2.0 HMM (Signal peptide probability 0.993, signal anchor probability 0.000) with cleavage site probability 0.683 between residues 19 and 20
GPI-Anchor Signal predicted for TA13720 by DGPI v2.04 with cleavage site probability 0.516 near 1520
1 probable transmembrane helix predicted for TA13720 by TMHMM2.0 at aa 1524-1541
chr2.C.cand.228 - hypothetical protein, conserved, pfb0177C
1 probable transmembrane helix predicted for TA13685 by TMHMM2.0 at aa 273-295
DNA replication licensing factor, putative
chr2.C.cand.232 - DNA replication licensing factor
all_bases.C.cand.392 - hypothetical protein
ubiquitin fusion degradation protein (UFD1 homologue), putative
chr2.C.cand.233 - hypothetical protein; 4 probable transmembrane helices predicted for TA13665 by TMHMM2.0 at aa 23-40, 47-69, 74-91 and 104-123
4 probable transmembrane helices predicted for TA13665 by TMHMM2.0 at aa 23-40, 47-69, 74-91 and 104-123
N2,N2-dimethylguanosine tRNA methyltransferase, putative
all_bases.C.cand.390 - N2,N2-dimethylguanosine tRNA methyltransferase
chr2.C.cand.234 - calcium-transporting ATPase; 8 probable transmembrane helices predicted for TA13655 by TMHMM2.0 at aa 69-88, 98-117, 216-238, 271-288, 309-331, 1049-1071, 1156-1178 and 1193-1210
chr2.cand.285 - hypothetical protein, conserved, mal8p1.134, contains 5 x SMART SM0239 C2 Protein kinase C conserved region 2 (CalB), transmembrane domain; 1 probable transmembrane helix predicted for TA13645 by TMHMM2.0 at aa 1395-1414
1 probable transmembrane helix predicted for TA13645 by TMHMM2.0 at aa 1395-1414
CDK-activating kinase assembly factor, putative
chr2.C.cand.236 - hypothetical protein, possible cdk-activating kinase assembly factor
all_bases.cand.1431 - ATP dependent RNA helicase
chr2.C.cand.239 - hypothetical protein, conserved, DUF 259
chr2.cand.283 - DnaJ domain protein; DnaJ domain protein
chr2.C.cand.241 - hypothetical protein; 4 probable transmembrane helices predicted for TA13590 by TMHMM2.0 at aa 7-29, 1170-1189, 1196-1213 and 1264-1283; Signal peptide predicted for TA13590 by SignalP 2.0 HMM (Signal peptide probability 0.901, signal anchor probability 0.012) with cleavage site probability 0.378 between residues 24 and 25
Signal peptide predicted for TA13590 by SignalP 2.0 HMM (Signal peptide probability 0.901, signal anchor probability 0.012) with cleavage site probability 0.378 between residues 24 and 25
4 probable transmembrane helices predicted for TA13590 by TMHMM2.0 at aa 7-29, 1170-1189, 1196-1213 and 1264-1283
chr2.C.cand.242 - ring/PHD finger; ring finger protein, putative
centromere/microtubule binding protein, putative
chr2.cand.281 - putative centromere/microtubule binding protein, belongs to the trub family of pseudouridine synthases, contains PF01509 TruB family pseudouridylate synthase (N terminal domain), PF01472 PUA domain
all_bases.cand.1438 - peptidase C54 domain
chr2.cand.277 - hypothetical protein, contains 2 potential PF00027 cyclic nucleotide binding domains
all_bases.C.cand.378 - hypothetical protein
chr2.C.cand.251 - phosphate transporter, signal peptide; 9 probable transmembrane helices predicted for TA13530 by TMHMM2.0 at aa 7-26, 46-68, 89-111, 145-167, 180-202, 230-252, 485-502, 531-553 and 715-737; Signal peptide predicted for TA13530 by SignalP 2.0 HMM (Signal peptide probability 0.634, signal anchor probability 0.363) with cleavage site probability 0.220 between residues 23 and 24
Signal peptide predicted for TA13530 by SignalP 2.0 HMM (Signal peptide probability 0.634, signal anchor probability 0.363) with cleavage site probability 0.220 between residues 23 and 24
chr2.C.cand.252 - ATP-dependent RNA helicase
chr2.cand.273 - hypothetical protein, conserved, pfl1085W
chr2.C.cand.253 - hypothetical protein, conserved, pfl1090W
all_bases.C.cand.374 - hypothetical protein; 1 probable transmembrane helix predicted for TA13505 by TMHMM2.0 at aa 21-43; Signal anchor predicted for TA13505 by SignalP 2.0 HMM (Signal peptide probability 0.003, signal anchor probability 0.890) with cleavage site probability 0.001 between residues 36 and 37
1 probable transmembrane helix predicted for TA13505 by TMHMM2.0 at aa 21-43
Signal anchor predicted for TA13505 by SignalP 2.0 HMM (Signal peptide probability 0.003, signal anchor probability 0.890) with cleavage site probability 0.001 between residues 36 and 37
cAMP-dependent protein kinase regulatory subunit, putative
all_bases.cand.1445 - camp-dependent protein kinase regulatory subunit, 2 x cyclic nucleotide binding domains
chr2.cand.271 - signal peptide, transmembrane; 5 probable transmembrane helices predicted for TA13495 by TMHMM2.0 at aa 13-35, 45-67, 148-165, 175-197 and 214-231; Signal anchor predicted for TA13495 by SignalP 2.0 HMM (Signal peptide probability 0.010, signal anchor probability 0.977) with cleavage site probability 0.003 between residues 22 and 23
5 probable transmembrane helices predicted for TA13495 by TMHMM2.0 at aa 13-35, 45-67, 148-165, 175-197 and 214-231
Signal anchor predicted for TA13495 by SignalP 2.0 HMM (Signal peptide probability 0.010, signal anchor probability 0.977) with cleavage site probability 0.003 between residues 22 and 23
chr2.cand.269 - DNAJ-like sec63 homologue; Apicoplast targetting peptide predicted by the PlasmoAP tool; 3 probable transmembrane helices predicted for TA13480 by TMHMM2.0 at aa 23-45, 103-125 and 225-247; Signal anchor predicted for TA13480 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 0.891) with cleavage site probability 0.000 between residues 44 and 45
3 probable transmembrane helices predicted for TA13480 by TMHMM2.0 at aa 23-45, 103-125 and 225-247
Signal anchor predicted for TA13480 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 0.891) with cleavage site probability 0.000 between residues 44 and 45
vacuolar ATP synthase subunit d, putative
chr2.cand.267 - vacuolar ATP synthase subunit d
40S ribosomal subunit protein S6, putative
chr2.cand.266 - 40s ribosomal subunit protein s6
chr2.cand.263 - score = 6.31; Apicoplast targetting peptide predicted by the PlasmoAP tool; 1 probable transmembrane helix predicted for TA13435 by TMHMM2.0 at aa 31-53; Signal anchor predicted for TA13435 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 0.964) with cleavage site probability 0.000 between residues 46 and 47
1 probable transmembrane helix predicted for TA13435 by TMHMM2.0 at aa 31-53
Signal anchor predicted for TA13435 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 0.964) with cleavage site probability 0.000 between residues 46 and 47
hypothetical protein, conserved Theileria family, signal peptide; Signal peptide predicted for TA13425 by SignalP 2.0 HMM (Signal peptide probability 0.980, signal anchor probability 0.003) with cleavage site probability 0.675 between residues 19 and 20
Signal peptide predicted for TA13425 by SignalP 2.0 HMM (Signal peptide probability 0.980, signal anchor probability 0.003) with cleavage site probability 0.675 between residues 19 and 20
chr2.cand.260 - hypothetical transmembrane protein; transmembrane protein, putative; 9 probable transmembrane helices predicted for TA13420 by TMHMM2.0 at aa 109-131, 317-339, 980-999, 1052-1074, 1084-1101, 1129-1151, 1191-1213, 1225-1247 and 1267-1289
chr2.C.cand.260 - hypothetical protein, conserved, pf13_0296
chr2.cand.259 - hypothetical protein, signal peptide
chr2.C.cand.261 - hypothetical protein, conserved, pf11_0163
all_bases.cand.1453 - hypothetical protein
chr2.cand.258 - conserved hypothetical transmembrane protein; 11 probable transmembrane helices predicted for TA13385 by TMHMM2.0 at aa 21-43, 58-80, 87-109, 119-141, 148-170, 174-191, 211-233, 248-267, 280-302, 317-339 and 352-374
RNA processing protein (crooked neck family), putative
chr2.cand.256 - PF00781 Diacylglycerol kinase catalytic domain (presumed), PF00609 Diacylglycerol kinase accessory domain (presumed)
chr2.cand.255 - hypothetical protein, conserved, pf14_0682, signal peptide; Apicoplast targetting peptide predicted by the PlasmoAP tool; 1 probable transmembrane helix predicted for TA13370 by TMHMM2.0 at aa 7-24; Signal peptide predicted for TA13370 by SignalP 2.0 HMM (Signal peptide probability 0.622, signal anchor probability 0.374) with cleavage site probability 0.415 between residues 29 and 30
Signal peptide predicted for TA13370 by SignalP 2.0 HMM (Signal peptide probability 0.622, signal anchor probability 0.374) with cleavage site probability 0.415 between residues 29 and 30
1 probable transmembrane helix predicted for TA13370 by TMHMM2.0 at aa 7-24
chr2.C.cand.263 - hypothetical protein, signal peptide; Signal peptide predicted for TA13360 by SignalP 2.0 HMM (Signal peptide probability 0.993, signal anchor probability 0.000) with cleavage site probability 0.701 between residues 17 and 18
Signal peptide predicted for TA13360 by SignalP 2.0 HMM (Signal peptide probability 0.993, signal anchor probability 0.000) with cleavage site probability 0.701 between residues 17 and 18
chr2.C.cand.264 - conserved hypothetical protein, jmjC domain, PF02246 Protein L b1 domain
DNA polymerase delta small subunit, putative
chr2.cand.253 - DNA polymerase delta small subunit
(SNARE-interacting) vesicle transport protein, putative
chr2.cand.253 - hypothetical protein; 1 probable transmembrane helix predicted for TA13335 by TMHMM2.0 at aa 130-152
1 probable transmembrane helix predicted for TA13335 by TMHMM2.0 at aa 130-152
all_bases.cand.1459 - fork-head domain protein
cell differentiation protein (RCD1 homologue), putative
all_bases.C.cand.356 - cell differentiation protein
chr2.C.cand.271 - hypothetical protein, conserved, mal4p2.40
all_bases.cand.1462 - ABC transporter; 5 probable transmembrane helices predicted for TA13290 by TMHMM2.0 at aa 136-158, 178-200, 265-287, 291-313 and 377-399
5 probable transmembrane helices predicted for TA13290 by TMHMM2.0 at aa 136-158, 178-200, 265-287, 291-313 and 377-399
all_bases.C.cand.353 - hypothetical protein, pf13_0274, DUF254 motif
chr2.C.cand.273 - hypothetical protein, exonuclease domain
all_bases.C.cand.352 - hypothetical membrane protein; membrane protein, putative; 12 probable transmembrane helices predicted for TA13275 by TMHMM2.0 at aa 65-87, 102-124, 136-153, 158-180, 210-232, 242-264, 316-338, 353-375, 395-414, 424-446, 467-489 and 499-521
all_bases.C.cand.351 - hypothetical protein, conserved, pfb0501C
all_bases.cand.1465 - GTP-binding protein, GTP1_OBJ domain
oxoglutarate/malate translocator protein, putative
chr2.cand.243 - mitochondrial carrier protein; 4 probable transmembrane helices predicted for TA13260 by TMHMM2.0 at aa 20-37, 120-142, 214-236 and 272-294
4 probable transmembrane helices predicted for TA13260 by TMHMM2.0 at aa 20-37, 120-142, 214-236 and 272-294
all_bases.C.cand.348 - hypothetical protein, conserved pf13_0018, SM0667, LisH Lissencephaly type-1-like homology motif, WD40 domains
all_bases.C.cand.345 - hypothetical protein, conserved pf13_0018, SM0667, LisH Lissencephaly type-1-like homology motif, WD40 domains
all_bases.cand.1468 - hypothetical protein
all_bases.cand.1469 - conserved hypothetical protein, pfe1415W, transmembrane, zinc finger; 4 probable transmembrane helices predicted for TA13215 by TMHMM2.0 at aa 71-93, 113-135, 216-238 and 253-275
4 probable transmembrane helices predicted for TA13215 by TMHMM2.0 at aa 71-93, 113-135, 216-238 and 253-275
vacuolar ATP synthase subunit f, putative
chr2.cand.236 - hypothetical protein, conserved, pfl1080C, PF01902 Domain of unknown function DUF71
replication factor A-related protein, putative
all_bases.C.cand.342 - replication factor a-related protein
(SSF, Peter Pan) family member protein, putative
purine nucleoside phosphorylase, putative
chr2.C.cand.281 - nucleoside phosphorylase
chr2.cand.233 - nucleoside phosphorylase
chr2.C.cand.282 - nucleoside phosphorylase, PF01048 Phosphorylase family
chr2.C.cand.283 - hypothetical protein, conserved, pf10_01831
chr2.C.cand.284 - PF00587 tRNA synthetase class II core domain (G, H, P, S and T)
chr2.cand.232 - hypothetical protein, conserved, PF00899 ThiF family
all_bases.C.cand.338 - DEAD box helicase
mitochondrial respiratory chain complexes assembly protein (AFG3 homologue), putative
chr2.C.cand.285 - ATP-dependent peptidase, PF00004 ATPase family associated with various cellular activities (AAA), PF01434 peptidase family M41
all_bases.cand.1476 - hypothetical protein, conserved, pf08_0079, PF01253 translation initiation factor SUI1
signal recognition particle receptor alpha subunit, putative
all_bases.cand.1479 - signal recognition particle receptor alpha subunit
chr2.cand.227 - nucleoside diphosphate kinase
chr2.cand.226 - hypothetical protein, transmembrane domains; 2 probable transmembrane helices predicted for TA13080 by TMHMM2.0 at aa 124-146 and 153-175
2 probable transmembrane helices predicted for TA13080 by TMHMM2.0 at aa 124-146 and 153-175
chr2.cand.225 - hypothetical membrane protein, signal peptide, transmembrane domains; membrane protein, putative; 4 probable transmembrane helices predicted for TA13075 by TMHMM2.0 at aa 21-43, 58-80, 85-107 and 134-156; Signal anchor predicted for TA13075 by SignalP 2.0 HMM (Signal peptide probability 0.002, signal anchor probability 0.998) with cleavage site probability 0.001 between residues 46 and 47
4 probable transmembrane helices predicted for TA13075 by TMHMM2.0 at aa 21-43, 58-80, 85-107 and 134-156
Signal anchor predicted for TA13075 by SignalP 2.0 HMM (Signal peptide probability 0.002, signal anchor probability 0.998) with cleavage site probability 0.001 between residues 46 and 47
chr2.C.cand.293 - clathrin coat assembly protein PF01217 clathrin adaptor complex small chain
chr2.cand.224 - hypothetical membrane protein; hypothetical membrane protein; 4 probable transmembrane helices predicted for TA13065 by TMHMM2.0 at aa 25-47, 60-79, 83-101 and 121-143
4 probable transmembrane helices predicted for TA13065 by TMHMM2.0 at aa 25-47, 60-79, 83-101 and 121-143
chr2.cand.222 - hypothetical protein, conserved, pf11_0433, TPR domain, DnaJ domain
chr2.C.cand.296 - hypothetical protein, conserved
chr2.C.cand.297 - signal peptide, some similarity to carbonic anhydrase; Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal peptide predicted for TA13045 by SignalP 2.0 HMM (Signal peptide probability 0.990, signal anchor probability 0.000) with cleavage site probability 0.417 between residues 22 and 23; GPI-Anchor Signal predicted for TA13045 by DGPI v2.04, no cleavage site predicted
Signal peptide predicted for TA13045 by SignalP 2.0 HMM (Signal peptide probability 0.990, signal anchor probability 0.000) with cleavage site probability 0.417 between residues 22 and 23
pre-mRNA splicing factor (PRP17 homologue), putative
chr2.C.cand.298 - pre-mrna splicing factor, WD40 domains
chr2.cand.219 - PF00612 IQ calmodulin-binding motif
chr2.C.cand.301 - hypothetical protein, conserved, pf13_0190, three TPR domains
chr2.C.cand.302 - DNA binding protein, PF00249 Myb-like DNA-binding domain
all_bases.C.cand.326 - hypothetical protein
oxysterol binding protein-related protein 1, putative
chr2.cand.215 - PF00169 PH domain pleckstrin homology PF01237 oxysterol-binding protein
all_bases.cand.1488 - calcium-dependent protein kinase
chr2.cand.212 - hypothetical protein, PF00627 UBA/TS-N domain; ubiquitin-related protein, putative
hypothetical protein, transmembrane; 3 probable transmembrane helices predicted for TA12955 by TMHMM2.0 at aa 7-29, 329-351 and 384-406
3 probable transmembrane helices predicted for TA12955 by TMHMM2.0 at aa 7-29, 329-351 and 384-406
all_bases.cand.1490 - hypothetical protein, conserved, pf14_0034, signal peptide, TLC TRAM, LAG1 and CLN8 homology domains.; 5 probable transmembrane helices predicted for TA12945 by TMHMM2.0 at aa 25-42, 142-164, 184-206, 226-248 and 269-291
5 probable transmembrane helices predicted for TA12945 by TMHMM2.0 at aa 25-42, 142-164, 184-206, 226-248 and 269-291
all_bases.C.cand.321 - hypothetical protein
translocation protein (SEC62 homologue), putative
all_bases.C.cand.321 - translocation protein sec62, putative; 2 probable transmembrane helices predicted for TA12935 by TMHMM2.0 at aa 177-199 and 224-246
2 probable transmembrane helices predicted for TA12935 by TMHMM2.0 at aa 177-199 and 224-246
all_bases.cand.1491 - ribosomal protein l20
(subtelomeric) ABC-transporter family member, putative
all_bases.cand.1492 - splicing factor 3 subunit 1, PF01805 Surp module (SWAP domain)
all_bases.C.cand.316 - hypothetical protein
chr2.cand.201 - hypothetical protein, conserved, pf14_0717
RNA modification (pseudouridylation) protein TruB family member, putative
all_bases.cand.1494 - PF01509 TruB family pseudouridylate synthase (N terminal domain)
calcium-dependent protein phosphatase, putative
chr2.cand.200 - 2 x EF hand domains and protein phosphatase-2A (PP2A) domains
cAMP-dependent protein kinase catalytic subunit, putative
all_bases.C.cand.312 - camp-dependent protein kinase catalytic subunit
U1/2 small nuclear ribonucleoprotein, putative
all_bases.C.cand.311 - small nuclear ribonucleoprotein, PF00076 RNA recognition motif
conserved hypothetical protein; 2 probable transmembrane helices predicted for TA12850 by TMHMM2.0 at aa 10-32 and 53-71; Signal peptide predicted for TA12850 by SignalP 2.0 HMM (Signal peptide probability 0.980, signal anchor probability 0.019) with cleavage site probability 0.363 between residues 21 and 22; GPI-Anchor Signal predicted for TA12850 by DGPI v2.04, no cleavage site predicted
2 probable transmembrane helices predicted for TA12850 by TMHMM2.0 at aa 10-32 and 53-71
Signal peptide predicted for TA12850 by SignalP 2.0 HMM (Signal peptide probability 0.980, signal anchor probability 0.019) with cleavage site probability 0.363 between residues 21 and 22
eukaryotic translation initiation factor 3, subunit 6, putative
all_bases.cand.1495 - eukaryotic translation initiation factor 3, subunit 6, putative
all_bases.cand.1496 - hypothetical protein
all_bases.cand.1496 - splicing factor 3b subunit 4
all_bases.C.cand.310 - uracil-DNA glycosylase, putative
all_bases.cand.1497 - hypothetical protein, conserved, pf14_0193
chr2.cand.196 - hypothetical protein, conserved, pfe1395C
60S acidic ribosomal protein p2, putative
chr2.C.cand.315 - 60S acidic ribosomal protein P2
all_bases.cand.1499 - hypothetical protein, conserved
chr2.cand.195 - PF00782 Dual specificity phosphatase, catalytic domain
50s ribosomal protein l9, signal peptide, apicoplast target sequence; 1 probable transmembrane helix predicted for TA12790 by TMHMM2.0 at aa 12-34
1 probable transmembrane helix predicted for TA12790 by TMHMM2.0 at aa 12-34
chr2.cand.194 - splicing factor PWI domain
chr2.C.cand.319 - rat brain protein-like
chr2.cand.192 - PF01866 putative diphthamide synthesis protein
small nuclear ribonucleoprotein associated protein b, putative
all_bases.cand.1505 - small nuclear ribonucleoprotein associated protein b
Lon protease homolog 2, mitochondrial precursor, putative
all_bases.C.cand.305 - lon protease homolog 2
all_bases.C.cand.304 - almost identical to Spm1
RNA polymerase 16kd subunit, RPB4-like, putative
all_bases.cand.1507 - RNA polymerase 16kd subunit
all_bases.C.cand.303 - hypothetical protein
all_bases.cand.1508 - hypothetical protein
signal peptide, apicoplast target sequence, DnaJ domain; Apicoplast targetting peptide predicted by the PlasmoAP tool; 1 probable transmembrane helix predicted for TA12720 by TMHMM2.0 at aa 4-21; Signal peptide predicted for TA12720 by SignalP 2.0 HMM (Signal peptide probability 0.917, signal anchor probability 0.000) with cleavage site probability 0.845 between residues 16 and 17
1 probable transmembrane helix predicted for TA12720 by TMHMM2.0 at aa 4-21
Signal peptide predicted for TA12720 by SignalP 2.0 HMM (Signal peptide probability 0.917, signal anchor probability 0.000) with cleavage site probability 0.845 between residues 16 and 17
eukaryotic peptide release factor (ERF), putative
all_bases.cand.1510 - peptide release factor erf1, pfam erf1-3
all_bases.C.cand.301 - signal peptide, Pfam thioredoxin; 1 probable transmembrane helix predicted for TA12705 by TMHMM2.0 at aa 7-29; Signal peptide predicted for TA12705 by SignalP 2.0 HMM (Signal peptide probability 0.990, signal anchor probability 0.006) with cleavage site probability 0.950 between residues 25 and 26
1 probable transmembrane helix predicted for TA12705 by TMHMM2.0 at aa 7-29
Signal peptide predicted for TA12705 by SignalP 2.0 HMM (Signal peptide probability 0.990, signal anchor probability 0.006) with cleavage site probability 0.950 between residues 25 and 26
all_bases.C.cand.300 - PF01331 mRNA capping enzyme, catalytic domain
all_bases.cand.1512 - PF03109 ABC1 family
serine/threonine protein phosphatase 1, PP1-gamma catalytic subunit, putative
chr2.cand.185 - serine/threonine protein phosphatase pp1-gamma catalytic subunit
chr2.cand.184 - Ring finger protein, PF00097 Zinc finger, C3HC4 type, PF00098 Zinc knuckle
chr2.C.cand.327 - signal, PF00380 Ribosomal protein S9/S16; 1 probable transmembrane helix predicted for TA12665 by TMHMM2.0 at aa 12-34; Signal peptide predicted for TA12665 by SignalP 2.0 HMM (Signal peptide probability 0.749, signal anchor probability 0.182) with cleavage site probability 0.582 between residues 28 and 29
Signal peptide predicted for TA12665 by SignalP 2.0 HMM (Signal peptide probability 0.749, signal anchor probability 0.182) with cleavage site probability 0.582 between residues 28 and 29
1 probable transmembrane helix predicted for TA12665 by TMHMM2.0 at aa 12-34
hypothetical protein, conserved, mal13p1.282
ubiquitin carboxy-terminal hydrolase, putative
chr2.C.cand.330 - ubiquitin carboxy terminal hydrolase
adhesion regulation modulator (ARM) protein, putative
all_bases.C.cand.296 - signal peptide, apicoplast target sequence, DnaJ domain; Apicoplast targetting peptide predicted by the PlasmoAP tool; 5 probable transmembrane helices predicted for TA12630 by TMHMM2.0 at aa 30-47, 137-159, 163-185, 197-219 and 333-350; Signal anchor predicted for TA12630 by SignalP 2.0 HMM (Signal peptide probability 0.014, signal anchor probability 0.973) with cleavage site probability 0.005 between residues 17 and 18
5 probable transmembrane helices predicted for TA12630 by TMHMM2.0 at aa 30-47, 137-159, 163-185, 197-219 and 333-350
Signal anchor predicted for TA12630 by SignalP 2.0 HMM (Signal peptide probability 0.014, signal anchor probability 0.973) with cleavage site probability 0.005 between residues 17 and 18
chr2.C.cand.332 - hypothetical protein, possible transmembrane; 2 probable transmembrane helices predicted for TA12625 by TMHMM2.0 at aa 28-50 and 78-100
2 probable transmembrane helices predicted for TA12625 by TMHMM2.0 at aa 28-50 and 78-100
all_bases.C.cand.295 - PF03054 tRNA methyl transferase, signal peptide, apicoplast target sequence; 1 probable transmembrane helix predicted for TA12620 by TMHMM2.0 at aa 5-27
1 probable transmembrane helix predicted for TA12620 by TMHMM2.0 at aa 5-27
all_bases.C.cand.293 - hypothetical protein
all_bases.cand.1520 - hypothetical protein, some conservation
all_bases.C.cand.292 - hypothetical protein, conserved, pf10_0204
apurinic/apyrimidinic endonuclease Apn1-like, putative
all_bases.C.cand.291 - apurinic/apyrimidinic endonuclease Apn1; Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal peptide predicted for TA12590 by SignalP 2.0 HMM (Signal peptide probability 0.937, signal anchor probability 0.027) with cleavage site probability 0.654 between residues 21 and 22
Signal peptide predicted for TA12590 by SignalP 2.0 HMM (Signal peptide probability 0.937, signal anchor probability 0.027) with cleavage site probability 0.654 between residues 21 and 22
eukaryotic translation initiation factor 6, putative
all_bases.C.cand.291 - translation initiation factor 6
all_bases.cand.1521 - Ubiquitin-activating enzyme (E1 enzyme), PF00899 ThiF family, PF02134 Repeat in ubiquitin-activating (UBA) protein
cargo protein (transmembrane protein tmp21 homologue), putative
chr2.cand.174 - cargo receptor, signal peptide, PF01105 emp24/gp25L/p24 family; 1 probable transmembrane helix predicted for TA12565 by TMHMM2.0 at aa 181-203
1 probable transmembrane helix predicted for TA12565 by TMHMM2.0 at aa 181-203
histone acetyltransferase, GCN5-like, putative
chr2.C.cand.338 - hypothetical protein, bromodomain
all_bases.C.cand.289 - hypothetical protein, conserved, pf14_0723, signal peptide
chr2.cand.169 - partially conserved hypothetical protein
chr2.C.cand.339 - syntaxin family, Syntaxin motif; 1 probable transmembrane helix predicted for TA12540 by TMHMM2.0 at aa 264-283
1 probable transmembrane helix predicted for TA12540 by TMHMM2.0 at aa 264-283
chr2.cand.168 - 60S ribosomal protein l23
possible signal peptide present; all_bases.cand.1525 - PF00749 tRNA synthetases class I (E and Q), catalytic domain; 2 probable transmembrane helices predicted for TA12530 by TMHMM2.0 at aa 588-610 and 630-652
2 probable transmembrane helices predicted for TA12530 by TMHMM2.0 at aa 588-610 and 630-652
cyclin-dependent protein kinase, PHO85 homologue, putative
chr2.C.cand.343 - hypothetical protein, some similarity to S. pombe nucleoporin
chr2.cand.161 - 60S ribosomal protein l27a
2 probable transmembrane helices predicted for TA12495 by TMHMM2.0
all_bases.C.cand.282 - hypothetical protein, possible signal peptide
chr2.C.cand.345 - hypothetical protein, partly conserved
endoplasmic reticulum transport protein, putative
chr2.C.cand.346 - conserved hypothetical protein, some similarity to human mbp-1 interacting protein-2a
topoisomerase-related nucleotidyltransferase, putative
chr2.cand.156 - PF01909 Nucleotidyltransferase domain
chr2.cand.156 - chaperonin, 2 x cpn10, signal peptide; Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal peptide predicted for TA12465 by SignalP 2.0 HMM (Signal peptide probability 0.909, signal anchor probability 0.000) with cleavage site probability 0.843 between residues 16 and 17
Signal peptide predicted for TA12465 by SignalP 2.0 HMM (Signal peptide probability 0.909, signal anchor probability 0.000) with cleavage site probability 0.843 between residues 16 and 17
chr2.C.cand.347 - isoleucyl-trna synthetase
eukaryotic translation initiation factor 3, putative
chr2.C.cand.348 - PF01398 Mov34/MPN/PAD-1 family
chr2.C.cand.350 - 60S ribosomal protein l30
chr2.C.cand.351 - beta adaptin PF01602 Adaptin N terminal region
eukaryotic translation initiation factor 3 subunit II, putative
chr2.cand.152 - initiation factor 3 subunit 11
chr2.C.cand.352 - conserved hypothetical protein
all_bases.cand.1537 - pfcg8-like protein; 1 probable transmembrane helix predicted for TA12410 by TMHMM2.0 at aa 113-135
1 probable transmembrane helix predicted for TA12410 by TMHMM2.0 at aa 113-135
chr2.cand.151 - hypothetical protein, conserved
chr2.cand.149 - 40s ribosomal protein s11
all_bases.cand.1539 - hypothetical protein, conserved, pf10_0097
all_bases.cand.1540 - hypothetical protein, conserved, pf08_0043
chr2.C.cand.358 - possible transporter, PF00083 Sugar (and other) transporter; 12 probable transmembrane helices predicted for TA12370 by TMHMM2.0 at aa 35-54, 100-122, 127-144, 154-176, 183-202, 217-236, 294-316, 331-350, 357-376, 380-402, 409-431 and 446-468; Signal anchor predicted for TA12370 by SignalP 2.0 HMM (Signal peptide probability 0.001, signal anchor probability 0.704) with cleavage site probability 0.001 between residues 54 and 55
Signal anchor predicted for TA12370 by SignalP 2.0 HMM (Signal peptide probability 0.001, signal anchor probability 0.704) with cleavage site probability 0.001 between residues 54 and 55
chr2.C.cand.360 - conserved hypothetical protein
vesicle trafficking protein-like 1, SEC22 homologue, putative
chr2.C.cand.362 - sec22 vesicle trafficking protein-like 1, synaptobrevin motif; 1 probable transmembrane helix predicted for TA12350 by TMHMM2.0 at aa 215-234
1 probable transmembrane helix predicted for TA12350 by TMHMM2.0 at aa 215-234
T-complex protein 1 epsilon subunit, putative
chr2.C.cand.363 - t-complex protein 1 epsilon subunit, putative
all_bases.C.cand.270 - ubiquitin-conjugating enzyme e2
chr2.C.cand.364 - PF03372 Endonuclease/Exonuclease/phosphatase family
all_bases.cand.1546 - hypothetical protein, partly conserved, pfc0970w, transmembrane domains; 5 probable transmembrane helices predicted for TA12325 by TMHMM2.0 at aa 156-178, 377-399, 473-490, 555-577 and 581-603
5 probable transmembrane helices predicted for TA12325 by TMHMM2.0 at aa 156-178, 377-399, 473-490, 555-577 and 581-603
chr2.C.cand.367 - DnaJ, signal peptide, apicoplast targetting sequence
chr2.C.cand.370 - hypothetical protein, conserved, pfl1655C
chr2.cand.141 - hypothetical protein; 1 probable transmembrane helix predicted for TA12245 by TMHMM2.0 at aa 9-31
1 probable transmembrane helix predicted for TA12245 by TMHMM2.0 at aa 9-31
chr2.C.cand.374 - hypothetical protein, low similarity to 50S ribosomal S9
all_bases.C.cand.267 - WD repeat protein; WD repeat protein, putative
anthranilate synthase component II, putative
chr2.C.cand.375 - anthranilate synthase, PF00218 Indole-3-glycerol phosphate synthase; Apicoplast targetting peptide predicted by the PlasmoAP tool; 1 probable transmembrane helix predicted for TA12230 by TMHMM2.0 at aa 13-35; Signal anchor predicted for TA12230 by SignalP 2.0 HMM (Signal peptide probability 0.054, signal anchor probability 0.606) with cleavage site probability 0.014 between residues 32 and 33
Signal anchor predicted for TA12230 by SignalP 2.0 HMM (Signal peptide probability 0.054, signal anchor probability 0.606) with cleavage site probability 0.014 between residues 32 and 33
1 probable transmembrane helix predicted for TA12230 by TMHMM2.0 at aa 13-35
chr2.C.cand.376 - hypothetical protein, signal peptide, transmembrane domain; 1 probable transmembrane helix predicted for TA12225 by TMHMM2.0 at aa 392-414; Signal peptide predicted for TA12225 by SignalP 2.0 HMM (Signal peptide probability 0.945, signal anchor probability 0.000) with cleavage site probability 0.733 between residues 21 and 22
Signal peptide predicted for TA12225 by SignalP 2.0 HMM (Signal peptide probability 0.945, signal anchor probability 0.000) with cleavage site probability 0.733 between residues 21 and 22
1 probable transmembrane helix predicted for TA12225 by TMHMM2.0 at aa 392-414
chr2.C.cand.377 - conserved hypothetical protein, transmembrane domains; 4 probable transmembrane helices predicted for TA12220 by TMHMM2.0 at aa 210-228, 245-262, 272-291 and 304-326
4 probable transmembrane helices predicted for TA12220 by TMHMM2.0 at aa 210-228, 245-262, 272-291 and 304-326
all_bases.cand.1558 - conserved hypothetical protein, transmembrane domain; 1 probable transmembrane helix predicted for TA12215 by TMHMM2.0 at aa 48-67; Signal anchor predicted for TA12215 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 0.961) with cleavage site probability 0.000 between residues 62 and 63
Signal anchor predicted for TA12215 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 0.961) with cleavage site probability 0.000 between residues 62 and 63
1 probable transmembrane helix predicted for TA12215 by TMHMM2.0 at aa 48-67
chr2.cand.137 - RNA binding protein, PF00076 RNA recognition motif
DNA binding protein PF02891 MIZ zinc finger
Signal anchor predicted for TA12185 by SignalP 2.0 HMM (Signal peptide probability 0.266, signal anchor probability 0.617) with cleavage site probability 0.214 between residues 29 and 30
Possible signal peptide present; 1 probable transmembrane helix predicted for TA12165 by TMHMM2.0 at aa 123-145; Signal peptide predicted for TA12165 by SignalP 2.0 HMM (Signal peptide probability 0.728, signal anchor probability 0.186) with cleavage site probability 0.677 between residues 25 and 26
Signal peptide predicted for TA12165 by SignalP 2.0 HMM (Signal peptide probability 0.728, signal anchor probability 0.186) with cleavage site probability 0.677 between residues 25 and 26
1 probable transmembrane helix predicted for TA12165 by TMHMM2.0 at aa 123-145
ATP synthase delta chain, mitochondrial, PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain
nucleolar GTP-binding protein 1, putative
Pfam hit to mitochondrion-associated cytochrome c oxidase assembly factor. PF02630 SCO1/SenC
Signal peptide predicted for TA12075 by SignalP 2.0 HMM (Signal peptide probability 0.866, signal anchor probability 0.120) with cleavage site probability 0.390 between residues 23 and 24
Contains possible signal peptide; 1 probable transmembrane helix predicted for TA12050 by TMHMM2.0 at aa 21-43
1 probable transmembrane helix predicted for TA12050 by TMHMM2.0 at aa 21-43
membrane protein family member, putative
membrane protein, contains signal peptide; 11 probable transmembrane helices predicted for TA12045 by TMHMM2.0 at aa 21-43, 58-77, 84-106, 116-138, 145-167, 182-204, 308-330, 345-367, 380-399, 409-431 and 489-511; Signal peptide predicted for TA12045 by SignalP 2.0 HMM (Signal peptide probability 0.631, signal anchor probability 0.026) with cleavage site probability 0.309 between residues 32 and 33
Signal peptide predicted for TA12045 by SignalP 2.0 HMM (Signal peptide probability 0.631, signal anchor probability 0.026) with cleavage site probability 0.309 between residues 32 and 33
1 probable transmembrane helix predicted for TA12025 by TMHMM2.0 at aa 287-309
hypothetical protein with WD40 domain, putative
8 probable transmembrane helices predicted for TA12005 by TMHMM2.0 at aa 52-74, 89-111, 118-137, 147-169, 240-262, 307-329, 336-358 and 363-385; Signal anchor predicted for TA12005 by SignalP 2.0 HMM (Signal peptide probability 0.003, signal anchor probability 0.768) with cleavage site probability 0.001 between residues 21 and 22
Signal anchor predicted for TA12005 by SignalP 2.0 HMM (Signal peptide probability 0.003, signal anchor probability 0.768) with cleavage site probability 0.001 between residues 21 and 22
1 probable transmembrane helix predicted for TA11985 by TMHMM2.0 at aa 713-735
mitochondrial processing peptidase alpha subunit, putative
mitochondrial processing peptidase alpha subunit PF00675 Insulinase (Peptidase family M16)
putative P-,Q-rich family protein, putative
Contains putative signal peptide, P-,Q-rich family 2, PF02178 AT hook motif; Signal peptide predicted for TA11965 by SignalP 2.0 HMM (Signal peptide probability 0.945, signal anchor probability 0.000) with cleavage site probability 0.863 between residues 22 and 23
Signal peptide predicted for TA11965 by SignalP 2.0 HMM (Signal peptide probability 0.945, signal anchor probability 0.000) with cleavage site probability 0.863 between residues 22 and 23
Contains possible signal peptide; 1 probable transmembrane helix predicted for TA11960 by TMHMM2.0 at aa 7-29
1 probable transmembrane helix predicted for TA11960 by TMHMM2.0 at aa 7-29
hypothetical protein P-, Q-rich family protein, putative
Contains possible signal peptide, P-, Q-rich family; 1 probable transmembrane helix predicted for TA11955 by TMHMM2.0 at aa 7-29; Signal peptide predicted for TA11955 by SignalP 2.0 HMM (Signal peptide probability 0.718, signal anchor probability 0.225) with cleavage site probability 0.402 between residues 18 and 19
Signal peptide predicted for TA11955 by SignalP 2.0 HMM (Signal peptide probability 0.718, signal anchor probability 0.225) with cleavage site probability 0.402 between residues 18 and 19
1 probable transmembrane helix predicted for TA11955 by TMHMM2.0 at aa 7-29
putative P-, Q-rich protein family protein, putative
Contains putative signal peptide; 1 probable transmembrane helix predicted for TA11950 by TMHMM2.0 at aa 7-26; Signal peptide predicted for TA11950 by SignalP 2.0 HMM (Signal peptide probability 0.602, signal anchor probability 0.000) with cleavage site probability 0.356 between residues 23 and 24
Signal peptide predicted for TA11950 by SignalP 2.0 HMM (Signal peptide probability 0.602, signal anchor probability 0.000) with cleavage site probability 0.356 between residues 23 and 24
1 probable transmembrane helix predicted for TA11950 by TMHMM2.0 at aa 7-26
1 probable transmembrane helix predicted for TA11940 by TMHMM2.0 at aa 7-29
Signal peptide predicted for TA11935 by SignalP 2.0 HMM (Signal peptide probability 0.839, signal anchor probability 0.000) with cleavage site probability 0.581 between residues 22 and 23
3 probable transmembrane helices predicted for TA11930 by TMHMM2.0 at aa 4-26, 33-55 and 75-92
Contains possible signal peptide; Signal peptide predicted for TA11915 by SignalP 2.0 HMM (Signal peptide probability 0.900, signal anchor probability 0.000) with cleavage site probability 0.847 between residues 22 and 23
Signal peptide predicted for TA11915 by SignalP 2.0 HMM (Signal peptide probability 0.900, signal anchor probability 0.000) with cleavage site probability 0.847 between residues 22 and 23
Signal peptide predicted for TA11905 by SignalP 2.0 HMM (Signal peptide probability 0.978, signal anchor probability 0.000) with cleavage site probability 0.468 between residues 17 and 18
chr2.C.cand.417 - hypothetical protein, signal peptide; 1 probable transmembrane helix predicted for TA11890 by TMHMM2.0 at aa 7-26; Signal anchor predicted for TA11890 by SignalP 2.0 HMM (Signal peptide probability 0.208, signal anchor probability 0.686) with cleavage site probability 0.089 between residues 29 and 30
Signal anchor predicted for TA11890 by SignalP 2.0 HMM (Signal peptide probability 0.208, signal anchor probability 0.686) with cleavage site probability 0.089 between residues 29 and 30
1 probable transmembrane helix predicted for TA11890 by TMHMM2.0 at aa 7-26
human hepatopoietin-like protein, putative
DNA-directed RNA polymerase 2 subunit, putative
4 probable transmembrane helices predicted for TA11875 by TMHMM2.0 at aa 36-55, 70-92, 113-135 and 139-161
chr2.C.cand.419 -conserved hypothetical protein
transcription initiation factor tfiib, putative
1-phosphatidylinositol-4-phosphate 5-kinase or 1-phosphatidylinositol-5-phosphate 4-kinase, putative
3-demethylubiquinone-9 3-methyltransferase-like protein, putative
5 probable transmembrane helices predicted for TA11810 by TMHMM2.0 at aa 145-167, 197-219, 292-314, 324-346 and 423-445
erythrocyte membrane-associated malaria antigen-like
some similarity to erythrocyte membrane-associated antigen; 1 probable transmembrane helix predicted for TA11805 by TMHMM2.0 at aa 460-479; Signal peptide predicted for TA11805 by SignalP 2.0 HMM (Signal peptide probability 0.632, signal anchor probability 0.000) with cleavage site probability 0.540 between residues 25 and 26
Signal peptide predicted for TA11805 by SignalP 2.0 HMM (Signal peptide probability 0.632, signal anchor probability 0.000) with cleavage site probability 0.540 between residues 25 and 26
1 probable transmembrane helix predicted for TA11805 by TMHMM2.0 at aa 460-479
Shows weak similarity to acyl phosphatases
KOW motif, signal peptide, apicoplast target sequence
Contains possible signal peptide and apicoplast target sequence; Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal peptide predicted for TA11770 by SignalP 2.0 HMM (Signal peptide probability 0.959, signal anchor probability 0.002) with cleavage site probability 0.653 between residues 18 and 19
Signal peptide predicted for TA11770 by SignalP 2.0 HMM (Signal peptide probability 0.959, signal anchor probability 0.002) with cleavage site probability 0.653 between residues 18 and 19
Contains possible signal peptide; 1 probable transmembrane helix predicted for TA11755 by TMHMM2.0 at aa 7-24; Signal peptide predicted for TA11755 by SignalP 2.0 HMM (Signal peptide probability 0.676, signal anchor probability 0.305) with cleavage site probability 0.539 between residues 26 and 27
Signal peptide predicted for TA11755 by SignalP 2.0 HMM (Signal peptide probability 0.676, signal anchor probability 0.305) with cleavage site probability 0.539 between residues 26 and 27
1 probable transmembrane helix predicted for TA11755 by TMHMM2.0 at aa 7-24
G-protein associated signal transduction protein, putative
3 probable transmembrane helices predicted for TA11740 by TMHMM2.0 at aa 77-99, 150-172 and 185-219
translation initiation factor if-2, putative
N-ethylmaleimide-sensitive factor, putative
dihydroorotate dehydrogenase, mitochondrial precursor, putative
1 probable transmembrane helix predicted for TA11690 by TMHMM2.0 at aa 1485-1507
apicoplast phe trna synthetase, signal peptide present, possible apicoplast target sequence present, PF01409 tRNA synthetases class II core domain (F), PF03147 Ferredoxin-fold anticodon binding domain; Apicoplast targetting peptide predicted by the PlasmoAP tool; 1 probable transmembrane helix predicted for TA11685 by TMHMM2.0 at aa 5-27; Signal peptide predicted for TA11685 by SignalP 2.0 HMM (Signal peptide probability 0.945, signal anchor probability 0.037) with cleavage site probability 0.596 between residues 23 and 24
1 probable transmembrane helix predicted for TA11685 by TMHMM2.0 at aa 5-27
Signal peptide predicted for TA11685 by SignalP 2.0 HMM (Signal peptide probability 0.945, signal anchor probability 0.037) with cleavage site probability 0.596 between residues 23 and 24
Weak Pfam hit to MAC/Perforin domain;e=0.00011;codon 333-653; contains possible signal peptide; Signal peptide predicted for TA11680 by SignalP 2.0 HMM (Signal peptide probability 0.718, signal anchor probability 0.000) with cleavage site probability 0.614 between residues 21 and 22
Signal peptide predicted for TA11680 by SignalP 2.0 HMM (Signal peptide probability 0.718, signal anchor probability 0.000) with cleavage site probability 0.614 between residues 21 and 22
2 probable transmembrane helices predicted for TA11660 by TMHMM2.0 at aa 586-608 and 643-665
1 probable transmembrane helix predicted for TA11625 by TMHMM2.0 at aa 99-121
1 probable transmembrane helix predicted for TA11600 by TMHMM2.0 at aa 849-871
Contains possible transmembrane domains; 2 probable transmembrane helices predicted for TA11595 by TMHMM2.0 at aa 133-151 and 155-174
2 probable transmembrane helices predicted for TA11595 by TMHMM2.0 at aa 133-151 and 155-174
Possible signal sequence and apicoplast target sequence present; Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal peptide predicted for TA11575 by SignalP 2.0 HMM (Signal peptide probability 0.662, signal anchor probability 0.020) with cleavage site probability 0.440 between residues 21 and 22
Signal peptide predicted for TA11575 by SignalP 2.0 HMM (Signal peptide probability 0.662, signal anchor probability 0.020) with cleavage site probability 0.440 between residues 21 and 22
4 probable transmembrane helices predicted for TA11570 by TMHMM2.0 at aa 112-134, 169-191, 211-232 and 271-293
1 probable transmembrane helix predicted for TA11565 by TMHMM2.0 at aa 43-65; Signal anchor predicted for TA11565 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 0.983) with cleavage site probability 0.000 between residues 61 and 62
Signal anchor predicted for TA11565 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 0.983) with cleavage site probability 0.000 between residues 61 and 62
1 probable transmembrane helix predicted for TA11565 by TMHMM2.0 at aa 43-65
1 probable transmembrane helix predicted for TA11515 by TMHMM2.0 at aa 108-130
DNA-damage inducible protein ddi1-like, putative
Possible transmembrane domains present; 3 probable transmembrane helices predicted for TA11505 by TMHMM2.0 at aa 66-88, 98-120 and 160-182
3 probable transmembrane helices predicted for TA11505 by TMHMM2.0 at aa 66-88, 98-120 and 160-182
Contains putative signal peptide; 1 probable transmembrane helix predicted for TA11495 by TMHMM2.0 at aa 20-37; Signal anchor predicted for TA11495 by SignalP 2.0 HMM (Signal peptide probability 0.154, signal anchor probability 0.606) with cleavage site probability 0.088 between residues 42 and 43
Signal anchor predicted for TA11495 by SignalP 2.0 HMM (Signal peptide probability 0.154, signal anchor probability 0.606) with cleavage site probability 0.088 between residues 42 and 43
1 probable transmembrane helix predicted for TA11495 by TMHMM2.0 at aa 20-37
eukaryotic translation initiation factor 4a, putative
Contains a putative signal peptide and a possible EGF-like domain; Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal peptide predicted for TA11465 by SignalP 2.0 HMM (Signal peptide probability 0.999, signal anchor probability 0.000) with cleavage site probability 0.733 between residues 21 and 22
Signal peptide predicted for TA11465 by SignalP 2.0 HMM (Signal peptide probability 0.999, signal anchor probability 0.000) with cleavage site probability 0.733 between residues 21 and 22
Contains putative signal petideand transmembrane domain; 5 probable transmembrane helices predicted for TA11460 by TMHMM2.0 at aa 12-34, 49-71, 91-113, 133-155 and 162-179
5 probable transmembrane helices predicted for TA11460 by TMHMM2.0 at aa 12-34, 49-71, 91-113, 133-155 and 162-179
chr2.cand.54 - conserved hypothetical protein, kelch motif, Histidine kinase-like ATPases domain
The P. falciparum hypothetical protein mal13p1.81pf is longer at Nterm; 2 probable transmembrane helices predicted for TA11435 by TMHMM2.0 at aa 49-71 and 92-114
2 probable transmembrane helices predicted for TA11435 by TMHMM2.0 at aa 49-71 and 92-114
long-chain acyl-coa synthetase, putative
u6 snrna-associated sm-like protein Lsm3, putative
Contains 5 putative transmembrane domains; 5 probable transmembrane helices predicted for TA15885 by TMHMM2.0 at aa 90-109, 129-148, 224-246, 253-270 and 285-304
5 probable transmembrane helices predicted for TA15885 by TMHMM2.0 at aa 90-109, 129-148, 224-246, 253-270 and 285-304
1 probable transmembrane helix predicted for TA15715 by TMHMM2.0 at aa 27-49; Signal anchor predicted for TA15715 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 0.990) with cleavage site probability 0.000 between residues 43 and 44
Signal anchor predicted for TA15715 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 0.990) with cleavage site probability 0.000 between residues 43 and 44
1 probable transmembrane helix predicted for TA15715 by TMHMM2.0 at aa 27-49
1 probable transmembrane helix predicted for TA15660 by TMHMM2.0 at aa 36-58; Signal anchor predicted for TA15660 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 1.000) with cleavage site probability 0.000 between residues -1 and 0
1 probable transmembrane helix predicted for TA15660 by TMHMM2.0 at aa 36-58
1 probable transmembrane helix predicted for TA15605 by TMHMM2.0 at aa 75-97
replication factor-a protein 1, putative
50S ribosomal protein l24, no apparent signal or apicoplast target sequence present, contains putative Pfam (PF00467) KOW motif
Contains putative Pafm (PF00397) WW domain
transcription factor btf3 homolog, putative
Zinc finger-like regulatory protein, putative
putative regulatory protein, C-terminus: 2 x PF00642 Zinc finger C-x8-C-x5-C-x3-H type
2 probable transmembrane helices predicted for TA15000 by TMHMM2.0 at aa 201-223 and 243-265
1-deoxy-D-xylulose 5-phosphate reducto-isomerase, putative
Apicoplast targetting peptide predicted by the PlasmoAP tool; 1 probable transmembrane helix predicted for TA14290 by TMHMM2.0 at aa 5-23; Signal peptide predicted for TA14290 by SignalP 2.0 HMM (Signal peptide probability 0.958, signal anchor probability 0.006) with cleavage site probability 0.640 between residues 20 and 21
1 probable transmembrane helix predicted for TA14290 by TMHMM2.0 at aa 5-23
Signal peptide predicted for TA14290 by SignalP 2.0 HMM (Signal peptide probability 0.958, signal anchor probability 0.006) with cleavage site probability 0.640 between residues 20 and 21
RNA and export factor binding protein, putative
2 probable transmembrane helices predicted for TA13960 by TMHMM2.0 at aa 62-84 and 162-184
Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal peptide predicted for TA13955 by SignalP 2.0 HMM (Signal peptide probability 0.793, signal anchor probability 0.199) with cleavage site probability 0.482 between residues 21 and 22
Signal peptide predicted for TA13955 by SignalP 2.0 HMM (Signal peptide probability 0.793, signal anchor probability 0.199) with cleavage site probability 0.482 between residues 21 and 22
glycylpeptide N-tetradecanoyltransferase 1, putative
all_bases.C.cand.171 - nmt1, PF01233 Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain, PF02799 Myristoyl-CoA:protein N-myristoyltransferase, C-terminal domain
Phosphatidylinositol-4-phosphate 5-Kinase, putative
Signal peptide predicted for TA13245 by SignalP 2.0 HMM (Signal peptide probability 0.998, signal anchor probability 0.001) with cleavage site probability 0.516 between residues 24 and 25
PF02136 Nuclear transport factor 2 (NTF2) domain
peptidyl-prolyl cis-trans isomerase taCyP precursor, putative
Contains a putative signal peptide; Signal peptide predicted for TA13185 by SignalP 2.0 HMM (Signal peptide probability 0.992, signal anchor probability 0.000) with cleavage site probability 0.873 between residues 17 and 18
Signal peptide predicted for TA13185 by SignalP 2.0 HMM (Signal peptide probability 0.992, signal anchor probability 0.000) with cleavage site probability 0.873 between residues 17 and 18
aspartate aminotransferase, cytoplasmic, putative
PF00808 Histone-like transcription factor (CBF/NF-Y) and archaeal histone, PF02969 TATA box binding protein associated factor (TAF)
serine/threonine protein phosphatase pp-x isozyme 1, putative
Putative signal peptide and apicoplast target sequence present
Theileria-specific hypothetical protein family member, putative
yippee-like zinc binding protein, putative
1 probable transmembrane helix predicted for TA12420 by TMHMM2.0 at aa 5-27; Signal anchor predicted for TA12420 by SignalP 2.0 HMM (Signal peptide probability 0.183, signal anchor probability 0.644) with cleavage site probability 0.044 between residues 29 and 30
Signal anchor predicted for TA12420 by SignalP 2.0 HMM (Signal peptide probability 0.183, signal anchor probability 0.644) with cleavage site probability 0.044 between residues 29 and 30
1 probable transmembrane helix predicted for TA12420 by TMHMM2.0 at aa 5-27
1 probable transmembrane helix predicted for TA12365 by TMHMM2.0 at aa 123-145; GPI-Anchor Signal predicted for TA12365 by DGPI v2.04, no cleavage site predicted
1 probable transmembrane helix predicted for TA12365 by TMHMM2.0 at aa 123-145
1 probable transmembrane helix predicted for TA12305 by TMHMM2.0 at aa 784-806
subtelomeric sfi-fragment-related protein family member, putative
Contains putative signal peptide; Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal peptide predicted for TA12035 by SignalP 2.0 HMM (Signal peptide probability 0.855, signal anchor probability 0.000) with cleavage site probability 0.500 between residues 18 and 19
Signal peptide predicted for TA12035 by SignalP 2.0 HMM (Signal peptide probability 0.855, signal anchor probability 0.000) with cleavage site probability 0.500 between residues 18 and 19
3 probable transmembrane helices predicted for TA11925 by TMHMM2.0 at aa 46-68, 186-208 and 223-245
Shows weak hit (4.4e-06) to Pfam PF00169 PH domain
chr2.cand.5 - hypothetical protein, low similarity to replication factor
chr2.cand.3 - hypothetical protein, signal peptide; Signal peptide predicted for TA11485 by SignalP 2.0 HMM (Signal peptide probability 0.950, signal anchor probability 0.000) with cleavage site probability 0.394 between residues 14 and 15
Signal peptide predicted for TA11485 by SignalP 2.0 HMM (Signal peptide probability 0.950, signal anchor probability 0.000) with cleavage site probability 0.394 between residues 14 and 15
chr2.C.cand.517 - hypothetical protein, signal peptide; Signal peptide predicted for TA11480 by SignalP 2.0 HMM (Signal peptide probability 0.622, signal anchor probability 0.000) with cleavage site probability 0.493 between residues 22 and 23
Signal peptide predicted for TA11480 by SignalP 2.0 HMM (Signal peptide probability 0.622, signal anchor probability 0.000) with cleavage site probability 0.493 between residues 22 and 23
ABC-transporter protein family, putative
Contains a putative signal peptide; 1 probable transmembrane helix predicted for TA11420 by TMHMM2.0 at aa 7-29; Signal peptide predicted for TA11420 by SignalP 2.0 HMM (Signal peptide probability 0.901, signal anchor probability 0.078) with cleavage site probability 0.606 between residues 22 and 23
Signal peptide predicted for TA11420 by SignalP 2.0 HMM (Signal peptide probability 0.901, signal anchor probability 0.078) with cleavage site probability 0.606 between residues 22 and 23
1 probable transmembrane helix predicted for TA11420 by TMHMM2.0 at aa 7-29
contains a putative signal peptide; 1 probable transmembrane helix predicted for TA11410 by TMHMM2.0 at aa 257-276; Signal peptide predicted for TA11410 by SignalP 2.0 HMM (Signal peptide probability 0.835, signal anchor probability 0.000) with cleavage site probability 0.828 between residues 21 and 22
Signal peptide predicted for TA11410 by SignalP 2.0 HMM (Signal peptide probability 0.835, signal anchor probability 0.000) with cleavage site probability 0.828 between residues 21 and 22
1 probable transmembrane helix predicted for TA11410 by TMHMM2.0 at aa 257-276
Contains a putatice signal peptide; Signal peptide predicted for TA11400 by SignalP 2.0 HMM (Signal peptide probability 0.717, signal anchor probability 0.000) with cleavage site probability 0.704 between residues 20 and 21
Signal peptide predicted for TA11400 by SignalP 2.0 HMM (Signal peptide probability 0.717, signal anchor probability 0.000) with cleavage site probability 0.704 between residues 20 and 21
signal peptide, telomeric PQ rich family protein; 1 probable transmembrane helix predicted for TA11390 by TMHMM2.0 at aa 494-516; Signal peptide predicted for TA11390 by SignalP 2.0 HMM (Signal peptide probability 0.930, signal anchor probability 0.000) with cleavage site probability 0.918 between residues 21 and 22
Signal peptide predicted for TA11390 by SignalP 2.0 HMM (Signal peptide probability 0.930, signal anchor probability 0.000) with cleavage site probability 0.918 between residues 21 and 22
1 probable transmembrane helix predicted for TA11390 by TMHMM2.0 at aa 494-516
chr2.C.cand.525 - partial P,Q-rich family; Signal peptide predicted for TA11385 by SignalP 2.0 HMM (Signal peptide probability 0.701, signal anchor probability 0.000) with cleavage site probability 0.690 between residues 21 and 22
Signal peptide predicted for TA11385 by SignalP 2.0 HMM (Signal peptide probability 0.701, signal anchor probability 0.000) with cleavage site probability 0.690 between residues 21 and 22
Tap387d05.p1c.cand.3 - score = 20.68; SMART 1 transmembrane domain at aa 13-35; 1 probable transmembrane helix predicted for TA09425 by TMHMM2.0 at aa 13-35; Signal anchor predicted for TA09425 by SignalP 2.0 HMM (Signal peptide probability 0.002, signal anchor probability 0.754) with cleavage site probability 0.001 between residues 40 and 41
Signal anchor predicted for TA09425 by SignalP 2.0 HMM (Signal peptide probability 0.002, signal anchor probability 0.754) with cleavage site probability 0.001 between residues 40 and 41
1 probable transmembrane helix predicted for TA09425 by TMHMM2.0 at aa 13-35
Tap387d05.p1c.cand.4 - score = 31.52; Signal peptide predicted for TA09430 by SignalP 2.0 HMM (Signal peptide probability 0.895, signal anchor probability 0.076) with cleavage site probability 0.454 between residues 21 and 22
Signal peptide predicted for TA09430 by SignalP 2.0 HMM (Signal peptide probability 0.895, signal anchor probability 0.076) with cleavage site probability 0.454 between residues 21 and 22
1 transmembrane domain at aa 5-27; 1 probable transmembrane helix predicted for TA09440 by TMHMM2.0 at aa 5-27; Signal anchor predicted for TA09440 by SignalP 2.0 HMM (Signal peptide probability 0.319, signal anchor probability 0.674) with cleavage site probability 0.117 between residues 25 and 26
1 probable transmembrane helix predicted for TA09440 by TMHMM2.0 at aa 5-27
Signal anchor predicted for TA09440 by SignalP 2.0 HMM (Signal peptide probability 0.319, signal anchor probability 0.674) with cleavage site probability 0.117 between residues 25 and 26
Tap387d05.p1c.cand.6 - score = 49.56; SMART 1 transmembrane domain at aa 5-27; 1 probable transmembrane helix predicted for TA09445 by TMHMM2.0 at aa 5-27; Signal anchor predicted for TA09445 by SignalP 2.0 HMM (Signal peptide probability 0.319, signal anchor probability 0.674) with cleavage site probability 0.117 between residues 25 and 26
Signal anchor predicted for TA09445 by SignalP 2.0 HMM (Signal peptide probability 0.319, signal anchor probability 0.674) with cleavage site probability 0.117 between residues 25 and 26
1 probable transmembrane helix predicted for TA09445 by TMHMM2.0 at aa 5-27
Tap387d05.p1c.cand.7 - score = 196.75; Signal peptide predicted for TA09450 by SignalP 2.0 HMM (Signal peptide probability 0.770, signal anchor probability 0.001) with cleavage site probability 0.657 between residues 25 and 26
Signal peptide predicted for TA09450 by SignalP 2.0 HMM (Signal peptide probability 0.770, signal anchor probability 0.001) with cleavage site probability 0.657 between residues 25 and 26