Theileria annulata chromosome 4, complete sequence, *** SEQUENCING IN PROGRESS ***.
Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Piroplasmida; Theileriidae; Theileria.
Genome of the host-cell transforming parasite Theileria annulata compared with T. parva
Submitted (29-JAN-2021) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA
Submitted (31-MAR-2005) The Wellcome Trust Sanger Institute Genome Campus, Hinxton, Cambridge CB10 1SA, UK
PROVISIONAL REFSEQ: This record has not yet been subject to final\nNCBI review. The reference sequence is identical to CR940353.\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: INSDC submitter\nAnnotation Status :: Full annotation\nAnnotation Pipeline :: Eukaryotic Annotation Propagation Pipeline\n##Genome-Annotation-Data-END##\n* NOTE: This is a 'working draft' sequence. It currently\n* consists of 1 contigs. Gaps between the contigs\n* are represented as runs of N. The order of the pieces\n* is believed to be correct as given, however the sizes\n* of the gaps between them are based on estimates that have\n* provided by the submitter.\n* This sequence will be replaced\n* by the finished sequence as soon as it is available and\n* the accession number will be preserved.\n* 1 1842271: contig of 1842271 bp in length.
SfiI-subtelomeric fragment related protein family member, putative
Signal peptide predicted for TA17105 by SignalP 2.0 HMM (Signal peptide probability 0.949, signal anchor probability 0.000) with cleavage site probability 0.746 between residues 25 and 26
Signal peptide predicted for TA17110 by SignalP 2.0 HMM (Signal peptide probability 0.968, signal anchor probability 0.000) with cleavage site probability 0.557 between residues 25 and 26
Telomeric protein, could be part of a family of conserved proteins of variable length; Signal peptide predicted for TA17115 by SignalP 2.0 HMM (Signal peptide probability 0.968, signal anchor probability 0.000) with cleavage site probability 0.686 between residues 25 and 26
Signal peptide predicted for TA17115 by SignalP 2.0 HMM (Signal peptide probability 0.968, signal anchor probability 0.000) with cleavage site probability 0.686 between residues 25 and 26
Theileria-specific sub-telomeric protein, SVSP family, putative
Related to Theileria parva hypothetical 49.7 kDa protein; Signal peptide predicted for TA17120 by SignalP 2.0 HMM (Signal peptide probability 0.673, signal anchor probability 0.036) with cleavage site probability 0.639 between residues 21 and 22
Signal peptide predicted for TA17120 by SignalP 2.0 HMM (Signal peptide probability 0.673, signal anchor probability 0.036) with cleavage site probability 0.639 between residues 21 and 22
Signal peptide predicted for TA17125 by SignalP 2.0 HMM (Signal peptide probability 0.779, signal anchor probability 0.000) with cleavage site probability 0.719 between residues 20 and 21
Signal peptide predicted for TA17130 by SignalP 2.0 HMM (Signal peptide probability 0.880, signal anchor probability 0.016) with cleavage site probability 0.813 between residues 21 and 22
1 probable transmembrane helix predicted for TA17145 by TMHMM2.0 at aa 581-603
1 probable transmembrane helix predicted for TA17175 by TMHMM2.0 at aa 7-24; Signal anchor predicted for TA17175 by SignalP 2.0 HMM (Signal peptide probability 0.016, signal anchor probability 0.882) with cleavage site probability 0.010 between residues 25 and 26
Signal anchor predicted for TA17175 by SignalP 2.0 HMM (Signal peptide probability 0.016, signal anchor probability 0.882) with cleavage site probability 0.010 between residues 25 and 26
1 probable transmembrane helix predicted for TA17175 by TMHMM2.0 at aa 7-24
1 probable transmembrane helix predicted for TA17180 by TMHMM2.0 at aa 625-647; Signal peptide predicted for TA17180 by SignalP 2.0 HMM (Signal peptide probability 0.858, signal anchor probability 0.000) with cleavage site probability 0.782 between residues 20 and 21
1 probable transmembrane helix predicted for TA17180 by TMHMM2.0 at aa 625-647
Signal peptide predicted for TA17180 by SignalP 2.0 HMM (Signal peptide probability 0.858, signal anchor probability 0.000) with cleavage site probability 0.782 between residues 20 and 21
1 probable transmembrane helix predicted for TA17185 by TMHMM2.0 at aa 249-271
1 probable transmembrane helix predicted for TA17200 by TMHMM2.0 at aa 5-27; Signal peptide predicted for TA17200 by SignalP 2.0 HMM (Signal peptide probability 0.782, signal anchor probability 0.213) with cleavage site probability 0.707 between residues 22 and 23
Signal peptide predicted for TA17200 by SignalP 2.0 HMM (Signal peptide probability 0.782, signal anchor probability 0.213) with cleavage site probability 0.707 between residues 22 and 23
1 probable transmembrane helix predicted for TA17200 by TMHMM2.0 at aa 5-27
Signal peptide predicted for TA17210 by SignalP 2.0 HMM (Signal peptide probability 0.721, signal anchor probability 0.069) with cleavage site probability 0.269 between residues 23 and 24; GPI-Anchor Signal predicted for TA17210 by DGPI v2.04 with cleavage site probability 0.124699995 near 557
Signal peptide predicted for TA17210 by SignalP 2.0 HMM (Signal peptide probability 0.721, signal anchor probability 0.069) with cleavage site probability 0.269 between residues 23 and 24
GPI-Anchor Signal predicted for TA17210 by DGPI v2.04 with cleavage site probability 0.124699995 near 557
1 probable transmembrane helix predicted for TA17215 by TMHMM2.0 at aa 7-29; Signal peptide predicted for TA17215 by SignalP 2.0 HMM (Signal peptide probability 0.638, signal anchor probability 0.186) with cleavage site probability 0.433 between residues 25 and 26
Signal peptide predicted for TA17215 by SignalP 2.0 HMM (Signal peptide probability 0.638, signal anchor probability 0.186) with cleavage site probability 0.433 between residues 25 and 26
1 probable transmembrane helix predicted for TA17215 by TMHMM2.0 at aa 7-29
1 probable transmembrane helix predicted for TA17220 by TMHMM2.0 at aa 7-29; Signal peptide predicted for TA17220 by SignalP 2.0 HMM (Signal peptide probability 0.949, signal anchor probability 0.050) with cleavage site probability 0.519 between residues 22 and 23; GPI-Anchor Signal predicted for TA17220 by DGPI v2.04 with cleavage site probability 0.124699995 near 516
Signal peptide predicted for TA17220 by SignalP 2.0 HMM (Signal peptide probability 0.949, signal anchor probability 0.050) with cleavage site probability 0.519 between residues 22 and 23
1 probable transmembrane helix predicted for TA17220 by TMHMM2.0 at aa 7-29
GPI-Anchor Signal predicted for TA17220 by DGPI v2.04 with cleavage site probability 0.124699995 near 516
26s protease regulatory subunit, putative
2 probable transmembrane helices predicted for TA17240 by TMHMM2.0 at aa 143-162 and 166-188
2 probable transmembrane helices predicted for TA17265 by TMHMM2.0 at aa 13-35 and 712-734; Signal anchor predicted for TA17265 by SignalP 2.0 HMM (Signal peptide probability 0.278, signal anchor probability 0.717) with cleavage site probability 0.170 between residues 34 and 35
2 probable transmembrane helices predicted for TA17265 by TMHMM2.0 at aa 13-35 and 712-734
Signal anchor predicted for TA17265 by SignalP 2.0 HMM (Signal peptide probability 0.278, signal anchor probability 0.717) with cleavage site probability 0.170 between residues 34 and 35
Signal peptide predicted for TA17270 by SignalP 2.0 HMM (Signal peptide probability 0.999, signal anchor probability 0.000) with cleavage site probability 0.503 between residues 17 and 18
lysophospholipase-like protein, putative
7 probable transmembrane helices predicted for TA17300 by TMHMM2.0 at aa 36-58, 145-167, 182-204, 216-238, 242-264, 284-306 and 360-382; Signal anchor predicted for TA17300 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 1.000) with cleavage site probability 0.000 between residues -1 and 0
Apicoplast targetting peptide predicted by the PlasmoAP tool; 1 probable transmembrane helix predicted for TA17305 by TMHMM2.0 at aa 4-26; Signal peptide predicted for TA17305 by SignalP 2.0 HMM (Signal peptide probability 0.964, signal anchor probability 0.032) with cleavage site probability 0.505 between residues 18 and 19
Signal peptide predicted for TA17305 by SignalP 2.0 HMM (Signal peptide probability 0.964, signal anchor probability 0.032) with cleavage site probability 0.505 between residues 18 and 19
1 probable transmembrane helix predicted for TA17305 by TMHMM2.0 at aa 4-26
surface protein precursor (TaSP), putative
3 probable transmembrane helices predicted for TA17315 by TMHMM2.0 at aa 204-226, 247-269 and 274-296; Signal peptide predicted for TA17315 by SignalP 2.0 HMM (Signal peptide probability 0.997, signal anchor probability 0.000) with cleavage site probability 0.944 between residues 19 and 20
Signal peptide predicted for TA17315 by SignalP 2.0 HMM (Signal peptide probability 0.997, signal anchor probability 0.000) with cleavage site probability 0.944 between residues 19 and 20
3 probable transmembrane helices predicted for TA17315 by TMHMM2.0 at aa 204-226, 247-269 and 274-296
4 probable transmembrane helices predicted for TA17325 by TMHMM2.0 at aa 25-44, 57-79, 94-116 and 137-159; Signal anchor predicted for TA17325 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 0.790) with cleavage site probability 0.000 between residues 39 and 40
Signal anchor predicted for TA17325 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 0.790) with cleavage site probability 0.000 between residues 39 and 40
4 probable transmembrane helices predicted for TA17325 by TMHMM2.0 at aa 25-44, 57-79, 94-116 and 137-159
Apicoplast targetting peptide predicted by the PlasmoAP tool; 2 probable transmembrane helices predicted for TA17340 by TMHMM2.0 at aa 20-42 and 63-85; Signal anchor predicted for TA17340 by SignalP 2.0 HMM (Signal peptide probability 0.013, signal anchor probability 0.860) with cleavage site probability 0.008 between residues 41 and 42
Signal anchor predicted for TA17340 by SignalP 2.0 HMM (Signal peptide probability 0.013, signal anchor probability 0.860) with cleavage site probability 0.008 between residues 41 and 42
2 probable transmembrane helices predicted for TA17340 by TMHMM2.0 at aa 20-42 and 63-85
Tpr-related protein family member, putative
Tap349h10.p1c.cand.5 - score = 11.41; 6 probable transmembrane helices predicted for TA07070 by TMHMM2.0 at aa 21-43, 63-82, 189-211, 296-318, 325-347 and 362-384; Signal anchor predicted for TA07070 by SignalP 2.0 HMM (Signal peptide probability 0.037, signal anchor probability 0.957) with cleavage site probability 0.019 between residues 42 and 43
Signal anchor predicted for TA07070 by SignalP 2.0 HMM (Signal peptide probability 0.037, signal anchor probability 0.957) with cleavage site probability 0.019 between residues 42 and 43
6 probable transmembrane helices predicted for TA07070 by TMHMM2.0 at aa 21-43, 63-82, 189-211, 296-318, 325-347 and 362-384
Tap349h10.p1c.C.cand.232 - score = 10.97; 1 probable transmembrane helix predicted for TA07230 by TMHMM2.0 at aa 181-203; Signal peptide predicted for TA07230 by SignalP 2.0 HMM (Signal peptide probability 0.643, signal anchor probability 0.000) with cleavage site probability 0.548 between residues 17 and 18
1 probable transmembrane helix predicted for TA07230 by TMHMM2.0 at aa 181-203
Signal peptide predicted for TA07230 by SignalP 2.0 HMM (Signal peptide probability 0.643, signal anchor probability 0.000) with cleavage site probability 0.548 between residues 17 and 18
rDNA dimethyladenosine transferase, putative
Signal peptide predicted for TA07505 by SignalP 2.0 HMM (Signal peptide probability 0.974, signal anchor probability 0.000) with cleavage site probability 0.755 between residues 16 and 17
Tap349h10.p1c.cand.8 - score = 7.93; 1 probable transmembrane helix predicted for TA07565 by TMHMM2.0 at aa 20-42; Signal anchor predicted for TA07565 by SignalP 2.0 HMM (Signal peptide probability 0.008, signal anchor probability 0.984) with cleavage site probability 0.003 between residues 38 and 39; GPI-Anchor Signal predicted for TA07565 by DGPI v2.04, no cleavage site predicted
Signal anchor predicted for TA07565 by SignalP 2.0 HMM (Signal peptide probability 0.008, signal anchor probability 0.984) with cleavage site probability 0.003 between residues 38 and 39
1 probable transmembrane helix predicted for TA07565 by TMHMM2.0 at aa 20-42
DEAD-box family (SNF2-like) helicase, putative
T-complex protein 1 (TCP1) chaperonin, putative
Tap349h10.p1c.cand.14 - score = 10.88; 2 probable transmembrane helices predicted for TA08280 by TMHMM2.0 at aa 33-55 and 93-115
2 probable transmembrane helices predicted for TA08280 by TMHMM2.0 at aa 33-55 and 93-115
1 probable transmembrane helix predicted for TA08609 by TMHMM2.0 at aa 9-31; Signal anchor predicted for TA08609 by SignalP 2.0 HMM (Signal peptide probability 0.174, signal anchor probability 0.632) with cleavage site probability 0.067 between residues 33 and 34
Signal anchor predicted for TA08609 by SignalP 2.0 HMM (Signal peptide probability 0.174, signal anchor probability 0.632) with cleavage site probability 0.067 between residues 33 and 34
1 probable transmembrane helix predicted for TA08609 by TMHMM2.0 at aa 9-31
bacterial histone-like protein, putative
Tap349h10.p1c.C.cand.213 - score = 10.03; Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal peptide predicted for TA08715 by SignalP 2.0 HMM (Signal peptide probability 0.927, signal anchor probability 0.070) with cleavage site probability 0.455 between residues 27 and 28
Signal peptide predicted for TA08715 by SignalP 2.0 HMM (Signal peptide probability 0.927, signal anchor probability 0.070) with cleavage site probability 0.455 between residues 27 and 28
1 probable transmembrane helix predicted for TA08830 by TMHMM2.0 at aa 89-111
Tap349h10.p1c.cand.21 - score = 12.50; Signal peptide predicted for TA09050 by SignalP 2.0 HMM (Signal peptide probability 1.000, signal anchor probability 0.000) with cleavage site probability 0.978 between residues 17 and 18
Signal peptide predicted for TA09050 by SignalP 2.0 HMM (Signal peptide probability 1.000, signal anchor probability 0.000) with cleavage site probability 0.978 between residues 17 and 18
Tap349h10.p1c.C.cand.211 - score = 19.47; 1 probable transmembrane helix predicted for TA09140 by TMHMM2.0 at aa 7-28; Signal peptide predicted for TA09140 by SignalP 2.0 HMM (Signal peptide probability 0.958, signal anchor probability 0.042) with cleavage site probability 0.798 between residues 24 and 25
1 probable transmembrane helix predicted for TA09140 by TMHMM2.0 at aa 7-28
Signal peptide predicted for TA09140 by SignalP 2.0 HMM (Signal peptide probability 0.958, signal anchor probability 0.042) with cleavage site probability 0.798 between residues 24 and 25
6 probable transmembrane helices predicted for TA09155 by TMHMM2.0 at aa 27-49, 514-536, 549-571, 586-608, 637-659 and 674-696; Signal anchor predicted for TA09155 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 0.987) with cleavage site probability 0.000 between residues -1 and 0
6 probable transmembrane helices predicted for TA09155 by TMHMM2.0 at aa 27-49, 514-536, 549-571, 586-608, 637-659 and 674-696
1 probable transmembrane helix predicted for TA09160 by TMHMM2.0 at aa 84-106
serine/threonine protein kinase, putative
structure-specific recognition protein (SSRP) 1, putative
leucine carboxylmethyl transferase, putative
leucine carboxyl methyltransferase, putative
Tap349h10.p1c.cand.27 - score = 28.22; 3 probable transmembrane helices predicted for TA09205 by TMHMM2.0 at aa 47-69, 247-269 and 308-330
3 probable transmembrane helices predicted for TA09205 by TMHMM2.0 at aa 47-69, 247-269 and 308-330
Pumilio-family RNA-binding protein, putative
Tap349h10.p1c.cand.28 - score = 28.53; 2 probable transmembrane helices predicted for TA09215 by TMHMM2.0 at aa 117-136 and 141-163
2 probable transmembrane helices predicted for TA09215 by TMHMM2.0 at aa 117-136 and 141-163
glucose-inhibited division protein a-like protein, putative
translation initiation factor (SUI1 homologue), putative
endosome sorting protein (SNF7 homologue), putative
Tap349h10.p1c.C.cand.202 - score = 9.04; 1 probable transmembrane helix predicted for TA09245 by TMHMM2.0 at aa 137-156
1 probable transmembrane helix predicted for TA09245 by TMHMM2.0 at aa 137-156
Tap349h10.p1c.C.cand.201 - score = 12.51; 1 probable transmembrane helix predicted for TA09255 by TMHMM2.0 at aa 172-194; Signal peptide predicted for TA09255 by SignalP 2.0 HMM (Signal peptide probability 0.998, signal anchor probability 0.000) with cleavage site probability 0.800 between residues 17 and 18
1 probable transmembrane helix predicted for TA09255 by TMHMM2.0 at aa 172-194
Signal peptide predicted for TA09255 by SignalP 2.0 HMM (Signal peptide probability 0.998, signal anchor probability 0.000) with cleavage site probability 0.800 between residues 17 and 18
Tap349h10.p1c.C.cand.199 - score = 19.62; Signal peptide predicted for TA09265 by SignalP 2.0 HMM (Signal peptide probability 0.914, signal anchor probability 0.002) with cleavage site probability 0.307 between residues 24 and 25
Signal peptide predicted for TA09265 by SignalP 2.0 HMM (Signal peptide probability 0.914, signal anchor probability 0.002) with cleavage site probability 0.307 between residues 24 and 25
There is overlap with TA09275 gene at the 3' end
There is overlap with TA09270 gene at the 3' end
Tap349h10.p1c.C.cand.196 - score = 18.55; 1 probable transmembrane helix predicted for TA09285 by TMHMM2.0 at aa 175-194
1 probable transmembrane helix predicted for TA09285 by TMHMM2.0 at aa 175-194
Tap349h10.p1c.C.cand.190 - score = 25.65; 3 probable transmembrane helices predicted for TA09320 by TMHMM2.0 at aa 221-240, 253-271 and 276-295; Signal peptide predicted for TA09320 by SignalP 2.0 HMM (Signal peptide probability 0.946, signal anchor probability 0.000) with cleavage site probability 0.686 between residues 13 and 14
3 probable transmembrane helices predicted for TA09320 by TMHMM2.0 at aa 221-240, 253-271 and 276-295
Signal peptide predicted for TA09320 by SignalP 2.0 HMM (Signal peptide probability 0.946, signal anchor probability 0.000) with cleavage site probability 0.686 between residues 13 and 14
Tap349h10.p1c.cand.39 - score = 41.75; 6 probable transmembrane helices predicted for TA09330 by TMHMM2.0 at aa 21-40, 50-68, 81-103, 118-140, 175-197 and 747-769; Signal anchor predicted for TA09330 by SignalP 2.0 HMM (Signal peptide probability 0.021, signal anchor probability 0.863) with cleavage site probability 0.007 between residues 38 and 39
Signal anchor predicted for TA09330 by SignalP 2.0 HMM (Signal peptide probability 0.021, signal anchor probability 0.863) with cleavage site probability 0.007 between residues 38 and 39
6 probable transmembrane helices predicted for TA09330 by TMHMM2.0 at aa 21-40, 50-68, 81-103, 118-140, 175-197 and 747-769
Tap349h10.p1c.cand.40 - score = 24.15; 3 probable transmembrane helices predicted for TA09335 by TMHMM2.0 at aa 151-173, 206-228 and 248-270
3 probable transmembrane helices predicted for TA09335 by TMHMM2.0 at aa 151-173, 206-228 and 248-270
GNAT-family N-acetyltransferase, putative
Tap349h10.p1c.cand.42 - score = 15.82; Signal peptide predicted for TA09365 by SignalP 2.0 HMM (Signal peptide probability 1.000, signal anchor probability 0.000) with cleavage site probability 0.962 between residues 17 and 18
Signal peptide predicted for TA09365 by SignalP 2.0 HMM (Signal peptide probability 1.000, signal anchor probability 0.000) with cleavage site probability 0.962 between residues 17 and 18
Tap349h10.p1c.cand.43 - score = 8.87; 3 probable transmembrane helices predicted for TA09380 by TMHMM2.0 at aa 7-24, 57-79 and 230-252
3 probable transmembrane helices predicted for TA09380 by TMHMM2.0 at aa 7-24, 57-79 and 230-252
small heat-shock (HSP) protein, putative
meiotic recombination (DMC1-like) protein, putative
Tap349h10.p1c.cand.45 - score = 12.61; 1 probable transmembrane helix predicted for TA07075 by TMHMM2.0 at aa 141-163
1 probable transmembrane helix predicted for TA07075 by TMHMM2.0 at aa 141-163
Tap349h10.p1c.C.cand.183 - score = 8.83; 1 probable transmembrane helix predicted for TA07085 by TMHMM2.0 at aa 12-34; Signal anchor predicted for TA07085 by SignalP 2.0 HMM (Signal peptide probability 0.090, signal anchor probability 0.900) with cleavage site probability 0.051 between residues 25 and 26
1 probable transmembrane helix predicted for TA07085 by TMHMM2.0 at aa 12-34
Signal anchor predicted for TA07085 by SignalP 2.0 HMM (Signal peptide probability 0.090, signal anchor probability 0.900) with cleavage site probability 0.051 between residues 25 and 26
Signal peptide predicted for TA07095 by SignalP 2.0 HMM (Signal peptide probability 0.932, signal anchor probability 0.000) with cleavage site probability 0.890 between residues 15 and 16
40S ribosomal S12-related protein, putative
Tap349h10.p1c.C.cand.177 - score = 14.24; Signal peptide predicted for TA07130 by SignalP 2.0 HMM (Signal peptide probability 1.000, signal anchor probability 0.000) with cleavage site probability 0.974 between residues 17 and 18
Signal peptide predicted for TA07130 by SignalP 2.0 HMM (Signal peptide probability 1.000, signal anchor probability 0.000) with cleavage site probability 0.974 between residues 17 and 18
Tap349h10.p1c.cand.51 - score = 11.10; 2 probable transmembrane helices predicted for TA07145 by TMHMM2.0 at aa 6-28 and 386-408; Signal peptide predicted for TA07145 by SignalP 2.0 HMM (Signal peptide probability 0.726, signal anchor probability 0.252) with cleavage site probability 0.428 between residues 21 and 22
Signal peptide predicted for TA07145 by SignalP 2.0 HMM (Signal peptide probability 0.726, signal anchor probability 0.252) with cleavage site probability 0.428 between residues 21 and 22
2 probable transmembrane helices predicted for TA07145 by TMHMM2.0 at aa 6-28 and 386-408
CTP-phosphoethanolamine cytidylyltransferase, putative
possible pseudogene since no start codon found at the beginning
Existence of Exon I not sure, possible pseudogene
gene model may need to be refined (small overlap with TA07180 at the 3' end)
nucleosome/chromatin assembly factor, putative
gene model may need to be refined (small overlap with TA07175 at the 3' end)
Tap349h10.p1c.C.cand.169 - score = 17.49; 7 probable transmembrane helices predicted for TA07200 by TMHMM2.0 at aa 21-43, 53-75, 87-106, 116-138, 145-164, 169-191 and 204-226; Signal anchor predicted for TA07200 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 0.889) with cleavage site probability 0.000 between residues 43 and 44
Signal anchor predicted for TA07200 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 0.889) with cleavage site probability 0.000 between residues 43 and 44
4 probable transmembrane helices predicted for TA07205 by TMHMM2.0 at aa 53-75, 107-126, 133-155 and 160-182; Signal anchor predicted for TA07205 by SignalP 2.0 HMM (Signal peptide probability 0.005, signal anchor probability 0.631) with cleavage site probability 0.002 between residues 43 and 44; GPI-Anchor Signal predicted for TA07205 by DGPI v2.04, no cleavage site predicted
4 probable transmembrane helices predicted for TA07205 by TMHMM2.0 at aa 53-75, 107-126, 133-155 and 160-182
Signal anchor predicted for TA07205 by SignalP 2.0 HMM (Signal peptide probability 0.005, signal anchor probability 0.631) with cleavage site probability 0.002 between residues 43 and 44
Tap349h10.p1c.C.cand.168 - score = 13.75; 7 probable transmembrane helices predicted for TA07210 by TMHMM2.0 at aa 15-34, 41-63, 78-100, 107-129, 139-156, 161-183 and 198-215; Signal anchor predicted for TA07210 by SignalP 2.0 HMM (Signal peptide probability 0.117, signal anchor probability 0.624) with cleavage site probability 0.039 between residues 36 and 37; GPI-Anchor Signal predicted for TA07210 by DGPI v2.04, no cleavage site predicted
Signal anchor predicted for TA07210 by SignalP 2.0 HMM (Signal peptide probability 0.117, signal anchor probability 0.624) with cleavage site probability 0.039 between residues 36 and 37
proton translocating inorganic pyrophosphatase, putative
Tap349h10.p1c.cand.63 - score = 74.25; 16 probable transmembrane helices predicted for TA07270 by TMHMM2.0 at aa 10-32, 53-75, 85-107, 137-159, 174-196, 235-257, 277-299, 312-334, 349-371, 376-398, 402-421, 426-448, 923-945, 952-974, 1021-1043 and 1145-1164; Signal peptide predicted for TA07270 by SignalP 2.0 HMM (Signal peptide probability 0.960, signal anchor probability 0.036) with cleavage site probability 0.687 between residues 21 and 22
Signal peptide predicted for TA07270 by SignalP 2.0 HMM (Signal peptide probability 0.960, signal anchor probability 0.036) with cleavage site probability 0.687 between residues 21 and 22
Tap349h10.p1c.C.cand.161 - score = 10.26; 1 probable transmembrane helix predicted for TA07275 by TMHMM2.0 at aa 25-47
1 probable transmembrane helix predicted for TA07275 by TMHMM2.0 at aa 25-47
lipid-binding/transfer protein, putative
(Mago nashi homologue) sex determination protein, putative
bromodomain containing protein, putative
DNA damage response protein (pescadillo homologue), putative
DNA repair (Rad51 homologue) protein, putative
Tap349h10.p1c.cand.71 - score = 26.69; 1 probable transmembrane helix predicted for TA07350 by TMHMM2.0 at aa 278-300
1 probable transmembrane helix predicted for TA07350 by TMHMM2.0 at aa 278-300
6 probable transmembrane helices predicted for TA07355 by TMHMM2.0 at aa 32-51, 99-121, 136-158, 211-233, 582-604 and 611-633
26S proteasome (regulatory) subunit, putative
Tap349h10.p1c.cand.76 - score = 21.05; 1 probable transmembrane helix predicted for TA07405 by TMHMM2.0 at aa 7-29
1 probable transmembrane helix predicted for TA07405 by TMHMM2.0 at aa 7-29
Tap349h10.p1c.cand.77 - score = 26.65; Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal peptide predicted for TA07415 by SignalP 2.0 HMM (Signal peptide probability 0.991, signal anchor probability 0.000) with cleavage site probability 0.722 between residues 18 and 19
Signal peptide predicted for TA07415 by SignalP 2.0 HMM (Signal peptide probability 0.991, signal anchor probability 0.000) with cleavage site probability 0.722 between residues 18 and 19
p36 (Toxoplasma gondii) homologue, putative
Tap349h10.p1c.cand.80 - score = 8.98; 1 probable transmembrane helix predicted for TA07455 by TMHMM2.0 at aa 2-21; Signal peptide predicted for TA07455 by SignalP 2.0 HMM (Signal peptide probability 0.761, signal anchor probability 0.235) with cleavage site probability 0.699 between residues 21 and 22
Signal peptide predicted for TA07455 by SignalP 2.0 HMM (Signal peptide probability 0.761, signal anchor probability 0.235) with cleavage site probability 0.699 between residues 21 and 22
1 probable transmembrane helix predicted for TA07455 by TMHMM2.0 at aa 2-21
vesicle transport (Sec1 family) protein, putative
Tap349h10.p1c.C.cand.145 - score = 26.88; Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal peptide predicted for TA07465 by SignalP 2.0 HMM (Signal peptide probability 0.993, signal anchor probability 0.000) with cleavage site probability 0.450 between residues 17 and 18
Signal peptide predicted for TA07465 by SignalP 2.0 HMM (Signal peptide probability 0.993, signal anchor probability 0.000) with cleavage site probability 0.450 between residues 17 and 18
Tap349h10.p1c.cand.82 - score = 13.56; 2 probable transmembrane helices predicted for TA07470 by TMHMM2.0 at aa 13-32 and 177-194; Signal peptide predicted for TA07470 by SignalP 2.0 HMM (Signal peptide probability 0.788, signal anchor probability 0.185) with cleavage site probability 0.566 between residues 27 and 28
Signal peptide predicted for TA07470 by SignalP 2.0 HMM (Signal peptide probability 0.788, signal anchor probability 0.185) with cleavage site probability 0.566 between residues 27 and 28
2 probable transmembrane helices predicted for TA07470 by TMHMM2.0 at aa 13-32 and 177-194
Tap349h10.p1c.C.cand.143 - score = 21.25; 8 probable transmembrane helices predicted for TA07480 by TMHMM2.0 at aa 21-40, 113-135, 147-169, 211-233, 240-262, 370-392, 399-421 and 464-486; Signal peptide predicted for TA07480 by SignalP 2.0 HMM (Signal peptide probability 0.981, signal anchor probability 0.002) with cleavage site probability 0.547 between residues 37 and 38; GPI-Anchor Signal predicted for TA07480 by DGPI v2.04 with cleavage site probability 0.103199996 near 452
GPI-Anchor Signal predicted for TA07480 by DGPI v2.04 with cleavage site probability 0.103199996 near 452
Signal peptide predicted for TA07480 by SignalP 2.0 HMM (Signal peptide probability 0.981, signal anchor probability 0.002) with cleavage site probability 0.547 between residues 37 and 38
prenyltransferase (protoheme farnesyltransferase), putative
Tap349h10.p1c.C.cand.137 - score = 28.19; 7 probable transmembrane helices predicted for TA07535 by TMHMM2.0 at aa 39-61, 92-114, 119-136, 149-171, 175-197, 225-247 and 276-295; Signal anchor predicted for TA07535 by SignalP 2.0 HMM (Signal peptide probability 0.275, signal anchor probability 0.660) with cleavage site probability 0.102 between residues 63 and 64
Signal anchor predicted for TA07535 by SignalP 2.0 HMM (Signal peptide probability 0.275, signal anchor probability 0.660) with cleavage site probability 0.102 between residues 63 and 64
eukaryotic translation initiation factor, putative
6 probable transmembrane helices predicted for TA07575 by TMHMM2.0 at aa 37-59, 119-141, 148-165, 169-191, 212-234 and 244-266
Tap349h10.p1c.C.cand.130 - score = 192.95; SMART 1 transmembrane domain at aa 34-51; 1 probable transmembrane helix predicted for TA07585 by TMHMM2.0 at aa 34-51; Signal anchor predicted for TA07585 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 0.747) with cleavage site probability 0.000 between residues 24 and 25
1 probable transmembrane helix predicted for TA07585 by TMHMM2.0 at aa 34-51
Signal anchor predicted for TA07585 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 0.747) with cleavage site probability 0.000 between residues 24 and 25
gene model may need to be refined (small strand overlap with TA07600 at the 3' end); SMART 1 transmembrane domain at aa 7-29; pfam: PseudoU_synth_1 (PF01416) at aa 348-457, E()=5.20e-07; Apicoplast targetting peptide predicted by the PlasmoAP tool; 1 probable transmembrane helix predicted for TA07595 by TMHMM2.0 at aa 7-29; Signal peptide predicted for TA07595 by SignalP 2.0 HMM (Signal peptide probability 0.646, signal anchor probability 0.009) with cleavage site probability 0.430 between residues 22 and 23
Signal peptide predicted for TA07595 by SignalP 2.0 HMM (Signal peptide probability 0.646, signal anchor probability 0.009) with cleavage site probability 0.430 between residues 22 and 23
1 probable transmembrane helix predicted for TA07595 by TMHMM2.0 at aa 7-29
gene model may need to be refined (small strand overlap with TA07595 at the 3' end)
GTPase-activity protein, or translation initiation factor IF-2 mitochondrial precursor, putative
Tap349h10.p1c.C.cand.126 - score = 107.93; SMART 1 transmembrane domain at aa 13-35; 1 probable transmembrane helix predicted for TA07610 by TMHMM2.0 at aa 13-35
1 probable transmembrane helix predicted for TA07610 by TMHMM2.0 at aa 13-35
Tap349h10.p1c.C.cand.124 - score = 28.48; SMART 3 transmembrane domains at 20-42, 139-161 and 190-212; Apicoplast targetting peptide predicted by the PlasmoAP tool; 3 probable transmembrane helices predicted for TA07630 by TMHMM2.0 at aa 20-42, 139-161 and 190-212; Signal anchor predicted for TA07630 by SignalP 2.0 HMM (Signal peptide probability 0.019, signal anchor probability 0.933) with cleavage site probability 0.009 between residues 37 and 38
3 probable transmembrane helices predicted for TA07630 by TMHMM2.0 at aa 20-42, 139-161 and 190-212
Signal anchor predicted for TA07630 by SignalP 2.0 HMM (Signal peptide probability 0.019, signal anchor probability 0.933) with cleavage site probability 0.009 between residues 37 and 38
guanine-nucleotide binding protein, putative
protein phosphatase regulator subunit, putative
Tap349h10.p1c.cand.104 - score = 15.03; SMART pfam:zf-DHHC (PF01529) at aa 135-199, E()=9.70e-31; 3 transmembrane domains at aa 38-60, 75-97 and 229-251; 4 probable transmembrane helices predicted for TA07715 by TMHMM2.0 at aa 38-60, 75-97, 192-214 and 229-251
4 probable transmembrane helices predicted for TA07715 by TMHMM2.0 at aa 38-60, 75-97, 192-214 and 229-251
Bis-(5' nucleosyl)-tetraphosphatase, putative
cell surface/extracellular protein, putative
1 probable transmembrane helix predicted for TA07750 by TMHMM2.0 at aa 838-860
thrombospondin-related protein, putative
Tap349h10.p1c.cand.114 - score = 7.46; SMART 2 domains pfam:ATP-synt_C (PF00137) at aa 12-77, E()=2.00e-10; 90-155, E()=4.80e-16; 4 probable transmembrane helices predicted for TA07825 by TMHMM2.0 at aa 10-32, 53-75, 90-112 and 132-154
4 probable transmembrane helices predicted for TA07825 by TMHMM2.0 at aa 10-32, 53-75, 90-112 and 132-154
splicing factor (Hs SLU7 homologue), putative
Tap349h10.p1c.cand.119 - score = 14.40; SMART 3 transmembrane domains at aa 22-44, 56-78 and 188-210; pfam:zf-DHHC (PF01529) at aa 91-155, E()=1.10e-32; 4 probable transmembrane helices predicted for TA07865 by TMHMM2.0 at aa 22-44, 56-78, 145-167 and 188-210; Signal anchor predicted for TA07865 by SignalP 2.0 HMM (Signal peptide probability 0.003, signal anchor probability 0.942) with cleavage site probability 0.001 between residues 19 and 20
Signal anchor predicted for TA07865 by SignalP 2.0 HMM (Signal peptide probability 0.003, signal anchor probability 0.942) with cleavage site probability 0.001 between residues 19 and 20
4 probable transmembrane helices predicted for TA07865 by TMHMM2.0 at aa 22-44, 56-78, 145-167 and 188-210
Tap349h10.p1c.C.cand.105 - score = 89.12; Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal peptide predicted for TA07870 by SignalP 2.0 HMM (Signal peptide probability 0.997, signal anchor probability 0.000) with cleavage site probability 0.979 between residues 16 and 17
Signal peptide predicted for TA07870 by SignalP 2.0 HMM (Signal peptide probability 0.997, signal anchor probability 0.000) with cleavage site probability 0.979 between residues 16 and 17
DNA-directed RNA polymerase I, second largest subunit, putative
1 probable transmembrane helix predicted for TA07900 by TMHMM2.0 at aa 236-258
DNA-directed RNA polymerase II subunit, putative
Tap349h10.p1c.cand.124 - score = 17.74; SMART 3 transmembrane domains at aa 85-104, 152-169 and 205-227; 3 probable transmembrane helices predicted for TA07930 by TMHMM2.0 at aa 85-104, 152-169 and 205-227
3 probable transmembrane helices predicted for TA07930 by TMHMM2.0 at aa 85-104, 152-169 and 205-227
Tap349h10.p1c.cand.125 - score = 25.97; SMART 4 transmembrane domains at aa 39-61, 68-90, 175-197 and 204-226; 4 probable transmembrane helices predicted for TA07935 by TMHMM2.0 at aa 39-61, 68-90, 175-197 and 204-226
4 probable transmembrane helices predicted for TA07935 by TMHMM2.0 at aa 39-61, 68-90, 175-197 and 204-226
ubiquinol-cytochrome c reductase complex, subunit, putative
SMART pfam:UCR_hinge (PF02320) at aa 27-98, E()=1.20e-04
U4/U6-associated splicing factor, putative
SMART pfam:HORMA (PF02301) at aa 11-197, E()=8.20e-05; GPI-Anchor Signal predicted for TA07970 by DGPI v2.04 with cleavage site probability 0.36720002 near 297
GPI-Anchor Signal predicted for TA07970 by DGPI v2.04 with cleavage site probability 0.36720002 near 297
ribosomal RNA methyltransferase (FtsJ homologue), putative
microfibrillar-associated protein, putative
proteasome subunit (alpha type 6 homologue), putative
exoribonuclease (XRN family member), putative
Tap349h10.p1c.cand.143 - score = 41.76; Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal peptide predicted for TA08105 by SignalP 2.0 HMM (Signal peptide probability 0.994, signal anchor probability 0.000) with cleavage site probability 0.607 between residues 23 and 24
Signal peptide predicted for TA08105 by SignalP 2.0 HMM (Signal peptide probability 0.994, signal anchor probability 0.000) with cleavage site probability 0.607 between residues 23 and 24
Tap349h10.p1c.C.cand.89 - score = 24.64; SMART 1 transmembrane domain at aa 37-59; TBC (SM00164) at aa 109-346, E()=1.56e-25; 1 probable transmembrane helix predicted for TA08110 by TMHMM2.0 at aa 37-59; Signal anchor predicted for TA08110 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 0.954) with cleavage site probability 0.000 between residues 53 and 54; GPI-Anchor Signal predicted for TA08110 by DGPI v2.04, no cleavage site predicted
1 probable transmembrane helix predicted for TA08110 by TMHMM2.0 at aa 37-59
Signal anchor predicted for TA08110 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 0.954) with cleavage site probability 0.000 between residues 53 and 54
glyceraldehyde-3-phosphate dehydrogenase, putative
Tap349h10.p1c.C.cand.85 - score = 27.61; SMART pfam:Cytochrome_C1 (PF02167) at aa 158-383, E()=1.70e-109; 1 probable transmembrane helix predicted for TA08150 by TMHMM2.0 at aa 360-379
1 probable transmembrane helix predicted for TA08150 by TMHMM2.0 at aa 360-379
Tap349h10.p1c.C.cand.82 - score = 46.80; SMART pfam:N_Arg (PF03485) at aa 11-99, E()=3.30e-02; pfam:tRNA-synt_1d (PF00750) at aa 121-463, E()=3.90e-126; GPI-Anchor Signal predicted for TA08180 by DGPI v2.04, no cleavage site predicted
26S proteasome regulatory subunit, putative
Tap349h10.p1c.C.cand.75 - score = 38.04; SMART 1 transmembrane domain at aa 344-366; Apicoplast targetting peptide predicted by the PlasmoAP tool; 2 probable transmembrane helices predicted for TA08235 by TMHMM2.0 at aa 19-36 and 344-366; Signal anchor predicted for TA08235 by SignalP 2.0 HMM (Signal peptide probability 0.043, signal anchor probability 0.826) with cleavage site probability 0.022 between residues 35 and 36
2 probable transmembrane helices predicted for TA08235 by TMHMM2.0 at aa 19-36 and 344-366
Signal anchor predicted for TA08235 by SignalP 2.0 HMM (Signal peptide probability 0.043, signal anchor probability 0.826) with cleavage site probability 0.022 between residues 35 and 36
Tap349h10.p1c.C.cand.72 - score = 9.47; Signal peptide predicted for TA08260 by SignalP 2.0 HMM (Signal peptide probability 0.982, signal anchor probability 0.000) with cleavage site probability 0.312 between residues 18 and 19
Signal peptide predicted for TA08260 by SignalP 2.0 HMM (Signal peptide probability 0.982, signal anchor probability 0.000) with cleavage site probability 0.312 between residues 18 and 19
chromosome segregation protein (SMC homologue), putative
serine/threonine protein phosphatase 2C, putative
Tap349h10.p1c.cand.159 - score = 12.07; SMART 2 transmembrane domains at aa 88-110 and 139-158; 2 probable transmembrane helices predicted for TA08305 by TMHMM2.0 at aa 88-110 and 139-158
2 probable transmembrane helices predicted for TA08305 by TMHMM2.0 at aa 88-110 and 139-158
SMART pfam:lactamase_B (PF00753) at aa 422-591, E()=6.00e-04
Actually it seemed that there is a deletion of the internal part of the Q8IKI3 protein; 12 probable transmembrane helices predicted for TA08325 by TMHMM2.0 at aa 19-38, 48-67, 158-180, 195-217, 238-260, 275-294, 307-329, 339-361, 766-788, 792-814, 1009-1031 and 1057-1079; Signal anchor predicted for TA08325 by SignalP 2.0 HMM (Signal peptide probability 0.130, signal anchor probability 0.844) with cleavage site probability 0.077 between residues 38 and 39; GPI-Anchor Signal predicted for TA08325 by DGPI v2.04, no cleavage site predicted
Signal anchor predicted for TA08325 by SignalP 2.0 HMM (Signal peptide probability 0.130, signal anchor probability 0.844) with cleavage site probability 0.077 between residues 38 and 39
SMART 2 transmembrane domains at aa 132-154 and 166-188; 2 probable transmembrane helices predicted for TA08330 by TMHMM2.0 at aa 132-154 and 166-188
2 probable transmembrane helices predicted for TA08330 by TMHMM2.0 at aa 132-154 and 166-188
SMART 2 pfam:Kelch domains (PF01344) at aa 16-66, E()=2.00e-03 and 141-188, E()=1.30e-03; 1 transmembrane domain at aa 101-118; PP2Ac (SM00156) at aa 450-755, E()=5.90e-99; 1 probable transmembrane helix predicted for TA08350 by TMHMM2.0 at aa 101-118
1 probable transmembrane helix predicted for TA08350 by TMHMM2.0 at aa 101-118
Tap349h10.p1c.C.cand.62 - score = 27.96; Signal peptide predicted for TA08360 by SignalP 2.0 HMM (Signal peptide probability 0.998, signal anchor probability 0.002) with cleavage site probability 0.900 between residues 18 and 19
Signal peptide predicted for TA08360 by SignalP 2.0 HMM (Signal peptide probability 0.998, signal anchor probability 0.002) with cleavage site probability 0.900 between residues 18 and 19
Tap349h10.p1c.C.cand.61 - score = 41.73; Signal peptide predicted for TA08365 by SignalP 2.0 HMM (Signal peptide probability 0.983, signal anchor probability 0.000) with cleavage site probability 0.880 between residues 16 and 17
Signal peptide predicted for TA08365 by SignalP 2.0 HMM (Signal peptide probability 0.983, signal anchor probability 0.000) with cleavage site probability 0.880 between residues 16 and 17
Tap349h10.p1c.C.cand.60 - score = 51.36; Signal peptide predicted for TA08370 by SignalP 2.0 HMM (Signal peptide probability 0.999, signal anchor probability 0.000) with cleavage site probability 0.868 between residues 21 and 22
Signal peptide predicted for TA08370 by SignalP 2.0 HMM (Signal peptide probability 0.999, signal anchor probability 0.000) with cleavage site probability 0.868 between residues 21 and 22
60S ribosome subunit biogenesis protein (Nip7 homologue), putative
4 probable transmembrane helices predicted for TA08410 by TMHMM2.0 at aa 572-589, 594-613, 618-640 and 838-860
Tap349h10.p1c.cand.170 - score = 174.08; 2 probable transmembrane helices predicted for TA08415 by TMHMM2.0 at aa 5-27 and 298-329; Signal peptide predicted for TA08415 by SignalP 2.0 HMM (Signal peptide probability 0.990, signal anchor probability 0.000) with cleavage site probability 0.454 between residues 33 and 34
Signal peptide predicted for TA08415 by SignalP 2.0 HMM (Signal peptide probability 0.990, signal anchor probability 0.000) with cleavage site probability 0.454 between residues 33 and 34
2 probable transmembrane helices predicted for TA08415 by TMHMM2.0 at aa 5-27 and 298-329
vacuolar ATP synthase, subunit, putative
Theileria parva microneme-rhoptry antigen, putative
Tap349h10.p1c.cand.172 - score = 66.70; SMART pfam:DUF529 (PF404385) at aa 268-401, E()=3.40e-02; 1 transmembrane domain at aa 875-892; 1 probable transmembrane helix predicted for TA08425 by TMHMM2.0 at aa 875-892; Signal peptide predicted for TA08425 by SignalP 2.0 HMM (Signal peptide probability 1.000, signal anchor probability 0.000) with cleavage site probability 0.762 between residues 19 and 20; GPI-Anchor Signal predicted for TA08425 by DGPI v2.04 with cleavage site probability 1.131 near 873
Signal peptide predicted for TA08425 by SignalP 2.0 HMM (Signal peptide probability 1.000, signal anchor probability 0.000) with cleavage site probability 0.762 between residues 19 and 20
GPI-Anchor Signal predicted for TA08425 by DGPI v2.04 with cleavage site probability 1.131 near 873
1 probable transmembrane helix predicted for TA08425 by TMHMM2.0 at aa 875-892
Tap349h10.p1c.C.cand.55 - score = 16.85; Signal peptide predicted for TA08445 by SignalP 2.0 HMM (Signal peptide probability 0.959, signal anchor probability 0.040) with cleavage site probability 0.357 between residues 26 and 27
Signal peptide predicted for TA08445 by SignalP 2.0 HMM (Signal peptide probability 0.959, signal anchor probability 0.040) with cleavage site probability 0.357 between residues 26 and 27
vacuolar ATP synthase, subunit beta, putative
cyclin-dependent serimne/threonine kinase (Cdk)-related protein, putative
Tap349h10.p1c.cand.178 - score = 24.33; SMART 1 transmembrane domain at aa 20-42; 1 probable transmembrane helix predicted for TA08485 by TMHMM2.0 at aa 20-42; Signal anchor predicted for TA08485 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 0.918) with cleavage site probability 0.000 between residues 41 and 42
Signal anchor predicted for TA08485 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 0.918) with cleavage site probability 0.000 between residues 41 and 42
1 probable transmembrane helix predicted for TA08485 by TMHMM2.0 at aa 20-42
Tap349h10.p1c.cand.179 - score = 32.38; SMART pfam:Fumble (PF03630) at aa 144-503, E()1.10e-10; 1 probable transmembrane helix predicted for TA08490 by TMHMM2.0 at aa 377-396
1 probable transmembrane helix predicted for TA08490 by TMHMM2.0 at aa 377-396
Tap349h10.p1c.cand.183 - score = 71.00; SMART TBC (SM00164) at aa 373-764, E()=8.83e-03; TLDc (SM00584) at aa 830-1020, E()=8.42e-12; 2 probable transmembrane helices predicted for TA08515 by TMHMM2.0 at aa 632-654 and 679-696
2 probable transmembrane helices predicted for TA08515 by TMHMM2.0 at aa 632-654 and 679-696
2-oxoglutarate dehydrogenase complex subunit, putative
spindle pole body/centrosome component, putative
4 probable transmembrane helices predicted for TA08560 by TMHMM2.0 at aa 305-327, 337-359, 545-564 and 579-601
RNA polymerase common subunit (Rpb6 homologue), putative
vesicle-associated membrane protein, putative
Tap349h10.p1c.C.cand.44 - score = 12.81; SMART pfam:MSP_domain (PF00635) at aa 4-118, E()=1.00e-21; 1 probable transmembrane helix predicted for TA08575 by TMHMM2.0 at aa 203-222
1 probable transmembrane helix predicted for TA08575 by TMHMM2.0 at aa 203-222
pre-mRNA splicing complex subunit (Spcwf2 homologue), putative
Tap349h10.p1c.C.cand.40 - score = 44.37; SMART pfam:tRNA-synt_2 (Pf00152) at aa 330-678, E()=2.60e-50; pfam:tRNA-synt_2b (PF00587) at aa 328-463, E()=3.40e-04; pfam:tRNA-synt_2d (PF01409) at aa 344-668, E()=3.70e-03; Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal peptide predicted for TA08620 by SignalP 2.0 HMM (Signal peptide probability 0.921, signal anchor probability 0.000) with cleavage site probability 0.692 between residues 23 and 24
Signal peptide predicted for TA08620 by SignalP 2.0 HMM (Signal peptide probability 0.921, signal anchor probability 0.000) with cleavage site probability 0.692 between residues 23 and 24
RNA polymerases I and III subunit (RPC19 homologue), putative
Tap349h10.p1c.C.cand.39 - score = 103.11; SMART pfam:Peptidase_M16 (PF00675) at aa 98-238, E()=6.90e-07; pfam:Peptidase_M16_C (PF05193) at aa 253-452, E()=1.00e-02; Apicoplast targetting peptide predicted by the PlasmoAP tool; 1 probable transmembrane helix predicted for TA08635 by TMHMM2.0 at aa 13-35; Signal peptide predicted for TA08635 by SignalP 2.0 HMM (Signal peptide probability 0.672, signal anchor probability 0.242) with cleavage site probability 0.237 between residues 32 and 33
1 probable transmembrane helix predicted for TA08635 by TMHMM2.0 at aa 13-35
Signal peptide predicted for TA08635 by SignalP 2.0 HMM (Signal peptide probability 0.672, signal anchor probability 0.242) with cleavage site probability 0.237 between residues 32 and 33
Tap349h10.p1c.cand.196 - score = 32.56; SMART 8 transmembrane domains, at aa 73-95, 110-132, 152-174, 194-216, 390-412, 471-493, 514-536 and 564-586; 9 probable transmembrane helices predicted for TA08670 by TMHMM2.0 at aa 10-32, 73-95, 110-132, 152-174, 194-216, 390-412, 471-493, 514-536 and 564-586; Signal peptide predicted for TA08670 by SignalP 2.0 HMM (Signal peptide probability 0.854, signal anchor probability 0.145) with cleavage site probability 0.276 between residues 22 and 23
Signal peptide predicted for TA08670 by SignalP 2.0 HMM (Signal peptide probability 0.854, signal anchor probability 0.145) with cleavage site probability 0.276 between residues 22 and 23
1 probable transmembrane helix predicted for TA08690 by TMHMM2.0 at aa 5-27; Signal peptide predicted for TA08690 by SignalP 2.0 HMM (Signal peptide probability 0.962, signal anchor probability 0.024) with cleavage site probability 0.845 between residues 22 and 23
Signal peptide predicted for TA08690 by SignalP 2.0 HMM (Signal peptide probability 0.962, signal anchor probability 0.024) with cleavage site probability 0.845 between residues 22 and 23
1 probable transmembrane helix predicted for TA08690 by TMHMM2.0 at aa 5-27
Tap349h10.p1c.C.cand.32 - score = 70.32; SMART AAA (SM00382) at aa 241-377, E()=1.96e-19; pfam:Peptidase_M41 (PF01434) at aa 434-646, E()=7.60e-73; 1 probable transmembrane helix predicted for TA08725 by TMHMM2.0 at aa 167-184
1 probable transmembrane helix predicted for TA08725 by TMHMM2.0 at aa 167-184
Tap349h10.p1c.cand.201 - score = 50.18; SMART pfam:PH (PF00169) at aa 219-313, E()=3.30e-03; Signal peptide predicted for TA08745 by SignalP 2.0 HMM (Signal peptide probability 0.973, signal anchor probability 0.013) with cleavage site probability 0.946 between residues 22 and 23
Signal peptide predicted for TA08745 by SignalP 2.0 HMM (Signal peptide probability 0.973, signal anchor probability 0.013) with cleavage site probability 0.946 between residues 22 and 23
chromosome maintenance protein (SMC5 homologue), putative
bifunctional dihydrofolate reductase/thymidilate synthase, putative
Tap349h10.p1c.C.cand.25 - score = 9.84; SMART 1 transmembrane domain at aa 24-41; 1 probable transmembrane helix predicted for TA08780 by TMHMM2.0 at aa 24-41
1 probable transmembrane helix predicted for TA08780 by TMHMM2.0 at aa 24-41
DNA replication protein (MCM homologue), putative
Tap349h10.p1c.cand.206 - score = 75.36; SMART 1 transmembrane domain at aa 208-230; MCM (SM00350) at aa 310-861, E()=2.61e-20; 2 probable transmembrane helices predicted for TA08800 by TMHMM2.0 at aa 208-230 and 322-341
2 probable transmembrane helices predicted for TA08800 by TMHMM2.0 at aa 208-230 and 322-341
elongation factor subunit (either EF1 or release factor), putative
ubiquitin protein ligase E3 component (N-recognin), putative
Tap349h10.p1c.C.cand.21 - score = 124.65; SMART 2 transmembrane domains 1706-1728 and 1910-1932; 2 probable transmembrane helices predicted for TA08855 by TMHMM2.0 at aa 1706-1728 and 1910-1932
2 probable transmembrane helices predicted for TA08855 by TMHMM2.0 at aa 1706-1728 and 1910-1932
1 probable transmembrane helix predicted for TA08880 by TMHMM2.0 at aa 20-39; Signal anchor predicted for TA08880 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 1.000) with cleavage site probability 0.000 between residues 40 and 41
Signal anchor predicted for TA08880 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 1.000) with cleavage site probability 0.000 between residues 40 and 41
1 probable transmembrane helix predicted for TA08880 by TMHMM2.0 at aa 20-39
endonuclease (xp-g/RAD2 homologue), putative
Tap349h10.p1c.cand.218 - score = 44.95; SMART 1 transmembrane domain at aa 227-249; 1 probable transmembrane helix predicted for TA08920 by TMHMM2.0 at aa 227-249
1 probable transmembrane helix predicted for TA08920 by TMHMM2.0 at aa 227-249
Tap349h10.p1c.C.cand.17 - score = 23.28; SMART 2 transmembrane domains at aa 138-155 and 432-454; 2 probable transmembrane helices predicted for TA08925 by TMHMM2.0 at aa 138-155 and 432-454
2 probable transmembrane helices predicted for TA08925 by TMHMM2.0 at aa 138-155 and 432-454
Tap349h10.p1c.C.cand.16 - score = 14.63; SMART 2 transmembrane domains at aa 5-27 and 34-56; Apicoplast targetting peptide predicted by the PlasmoAP tool; 2 probable transmembrane helices predicted for TA08935 by TMHMM2.0 at aa 5-27 and 34-56; Signal anchor predicted for TA08935 by SignalP 2.0 HMM (Signal peptide probability 0.009, signal anchor probability 0.795) with cleavage site probability 0.006 between residues 24 and 25
2 probable transmembrane helices predicted for TA08935 by TMHMM2.0 at aa 5-27 and 34-56
Signal anchor predicted for TA08935 by SignalP 2.0 HMM (Signal peptide probability 0.009, signal anchor probability 0.795) with cleavage site probability 0.006 between residues 24 and 25
Tap349h10.p1c.cand.222 - score = 17.65; SMART PHB (SM00244) at aa 93-258, E()=6.41e-01; 1 probable transmembrane helix predicted for TA08975 by TMHMM2.0 at aa 81-103
1 probable transmembrane helix predicted for TA08975 by TMHMM2.0 at aa 81-103
Tap349h10.p1c.cand.224 - score = 59.76; SMART 1 transmembrane domain at aa 241-263; 1 probable transmembrane helix predicted for TA08985 by TMHMM2.0 at aa 241-263
1 probable transmembrane helix predicted for TA08985 by TMHMM2.0 at aa 241-263
Tap349h10.p1c.C.cand.12 - score = 12.12; SMART ZnF_NFX (SM00438) at aa 1-13, E()=0.00e+00; pfam:UPF0103 (PF01875) at aa 36318, E()=3.40e-87; pfam:LIgB (PF02900) at aa 58-309, E()=4.10e-02; 1 probable transmembrane helix predicted for TA08990 by TMHMM2.0 at aa 20-39
1 probable transmembrane helix predicted for TA08990 by TMHMM2.0 at aa 20-39
Tap349h10.p1c.cand.225 - score = 18.85; SMART pfam:mito_carr (PF00153) at aa 97-185, E()=9.60e-13 and 195-288, E()=1.60e-07; 2 transmembrane domains at aa 13-35 and 70-92; 3 probable transmembrane helices predicted for TA09005 by TMHMM2.0 at aa 13-35, 70-92 and 193-215
3 probable transmembrane helices predicted for TA09005 by TMHMM2.0 at aa 13-35, 70-92 and 193-215
1 probable transmembrane helix predicted for TA09020 by TMHMM2.0 at aa 124-141
DEAD-box family RNA-dependent helicase, putative
Tap349h10.p1c.C.cand.5 - score = 11.67; SMART 2 transmembrane domains at aa 5-27, 47-69; 2 probable transmembrane helices predicted for TA09080 by TMHMM2.0 at aa 5-27 and 47-69; Signal anchor predicted for TA09080 by SignalP 2.0 HMM (Signal peptide probability 0.069, signal anchor probability 0.899) with cleavage site probability 0.022 between residues 30 and 31
2 probable transmembrane helices predicted for TA09080 by TMHMM2.0 at aa 5-27 and 47-69
Signal anchor predicted for TA09080 by SignalP 2.0 HMM (Signal peptide probability 0.069, signal anchor probability 0.899) with cleavage site probability 0.022 between residues 30 and 31
SMART 2 transmembrane domains at aa 21-43 and 58-80; 2 probable transmembrane helices predicted for TA09095 by TMHMM2.0 at aa 21-43 and 58-80
2 probable transmembrane helices predicted for TA09095 by TMHMM2.0 at aa 21-43 and 58-80
Tap349h10.p1c.cand.234 - score = 62.38; SMART 1 transmembrane at aa 13-35; 1 probable transmembrane helix predicted for TA09115 by TMHMM2.0 at aa 13-35; Signal anchor predicted for TA09115 by SignalP 2.0 HMM (Signal peptide probability 0.179, signal anchor probability 0.776) with cleavage site probability 0.092 between residues 29 and 30
Signal anchor predicted for TA09115 by SignalP 2.0 HMM (Signal peptide probability 0.179, signal anchor probability 0.776) with cleavage site probability 0.092 between residues 29 and 30
1 probable transmembrane helix predicted for TA09115 by TMHMM2.0 at aa 13-35
SMART 1 transmembrane domain at aa 330-352; 1 probable transmembrane helix predicted for TA09120 by TMHMM2.0 at aa 330-352
1 probable transmembrane helix predicted for TA09120 by TMHMM2.0 at aa 330-352
small GTPase (Rab family member), putative
mRNA turnover/deadenylation component (POP2 homologue), putative
Tap579b07.q1c.C.cand.3 - score = 9.75; 1 probable transmembrane helix predicted for TA11020 by TMHMM2.0 at aa 7-26; Signal peptide predicted for TA11020 by SignalP 2.0 HMM (Signal peptide probability 0.985, signal anchor probability 0.014) with cleavage site probability 0.869 between residues 23 and 24
Signal peptide predicted for TA11020 by SignalP 2.0 HMM (Signal peptide probability 0.985, signal anchor probability 0.014) with cleavage site probability 0.869 between residues 23 and 24
1 probable transmembrane helix predicted for TA11020 by TMHMM2.0 at aa 7-26
Tap579b07.q1c.C.cand.4 - score = 43.90; SMART S1 (SM00316) at aa 598-671, 7.80e-02; 813-884, E()=6.70e+00; Apicoplast targetting peptide predicted by the PlasmoAP tool; 1 probable transmembrane helix predicted for TA11015 by TMHMM2.0 at aa 7-29; Signal peptide predicted for TA11015 by SignalP 2.0 HMM (Signal peptide probability 0.622, signal anchor probability 0.327) with cleavage site probability 0.170 between residues 15 and 16
Signal peptide predicted for TA11015 by SignalP 2.0 HMM (Signal peptide probability 0.622, signal anchor probability 0.327) with cleavage site probability 0.170 between residues 15 and 16
1 probable transmembrane helix predicted for TA11015 by TMHMM2.0 at aa 7-29
Tap579b07.q1c.cand.148 - score = 52.44; SMART pfam:UPF0004 (PF00919) at aa 316-401, E()=1.70-31; Elp3 (SM00729) at aa 459-677, E()=1.32e-26; 1 probable transmembrane helix predicted for TA11010 by TMHMM2.0 at aa 7-29
1 probable transmembrane helix predicted for TA11010 by TMHMM2.0 at aa 7-29
Tap579b07.q1c.C.cand.5 - score = 15.89; Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal peptide predicted for TA11005 by SignalP 2.0 HMM (Signal peptide probability 0.909, signal anchor probability 0.064) with cleavage site probability 0.808 between residues 20 and 21
Signal peptide predicted for TA11005 by SignalP 2.0 HMM (Signal peptide probability 0.909, signal anchor probability 0.064) with cleavage site probability 0.808 between residues 20 and 21
Tap579b07.q1c.cand.145 - score = 152.29; SMART 1 transmembrane domain at aa 17-39; 1 probable transmembrane helix predicted for TA10980 by TMHMM2.0 at aa 17-39
1 probable transmembrane helix predicted for TA10980 by TMHMM2.0 at aa 17-39
SMART pfam:HesB-like (PF01521) at aa 201-293, E()=7.40e-11; 1 probable transmembrane helix predicted for TA10960 by TMHMM2.0 at aa 107-129
1 probable transmembrane helix predicted for TA10960 by TMHMM2.0 at aa 107-129
papain-family cysteine protease, putative
Tap579b07.q1c.cand.144 - score = 49.40; SMART Pept_C1 (SM00645) at aa 219-467, E()=3.24e-12; Signal peptide predicted for TA10955 by SignalP 2.0 HMM (Signal peptide probability 0.913, signal anchor probability 0.000) with cleavage site probability 0.697 between residues 15 and 16; GPI-Anchor Signal predicted for TA10955 by DGPI v2.04, no cleavage site predicted
Signal peptide predicted for TA10955 by SignalP 2.0 HMM (Signal peptide probability 0.913, signal anchor probability 0.000) with cleavage site probability 0.697 between residues 15 and 16
Tap579b07.q1c.C.cand.9 - score = 14.51; SMART pfam:UCR_UQCRX_QCR9 (PF05365) at aa 38-94, E()=3.30e-03; 1 probable transmembrane helix predicted for TA10945 by TMHMM2.0 at aa 52-71
1 probable transmembrane helix predicted for TA10945 by TMHMM2.0 at aa 52-71
short-chain dehydrogenase/reductase (SDR family member), putative
Tap579b07.q1c.cand.140 - score = 30.20; SMART 1 transmembrane domain at aa 21-43; pfam:adh_short (PF00106) at aa 104-379, E()=3.30e-26; 1 probable transmembrane helix predicted for TA10925 by TMHMM2.0 at aa 21-43; Signal anchor predicted for TA10925 by SignalP 2.0 HMM (Signal peptide probability 0.002, signal anchor probability 0.978) with cleavage site probability 0.000 between residues 33 and 34
1 probable transmembrane helix predicted for TA10925 by TMHMM2.0 at aa 21-43
Signal anchor predicted for TA10925 by SignalP 2.0 HMM (Signal peptide probability 0.002, signal anchor probability 0.978) with cleavage site probability 0.000 between residues 33 and 34
Tap579b07.q1c.cand.139 - score = 31.51; SMART 2 transmembrane domains at aa 53-75 and 96-118; pfam:adh_short (PF00106) at aa 137-398, E()=1.20e-20; 2 probable transmembrane helices predicted for TA10920 by TMHMM2.0 at aa 53-75 and 96-118
2 probable transmembrane helices predicted for TA10920 by TMHMM2.0 at aa 53-75 and 96-118
translation elongation factor 1-alpha, putative
SWI/SNF-related chromatin remodelling factor (ISWI homologue), putative
N-acetylglucosaminyl-phosphatidylinositolde-N- ace tylase
SMART 1 transmembrane domain at aa 182-204; 1 probable transmembrane helix predicted for TA10880 by TMHMM2.0 at aa 182-204; Signal peptide predicted for TA10880 by SignalP 2.0 HMM (Signal peptide probability 0.968, signal anchor probability 0.000) with cleavage site probability 0.748 between residues 17 and 18
1 probable transmembrane helix predicted for TA10880 by TMHMM2.0 at aa 182-204
Signal peptide predicted for TA10880 by SignalP 2.0 HMM (Signal peptide probability 0.968, signal anchor probability 0.000) with cleavage site probability 0.748 between residues 17 and 18
SMART pfam:proteasome (PF00227) at aa 20-205, E()=1.30e-29
Tap579b07.q1c.cand.133 - score = 26.83; SMART 10 transmembrane domains at aa 21-40, 109-131, 143-165, 170-192, 205-227, 330-352, 365-387, 442-464, 483-505 and 515-537; 10 probable transmembrane helices predicted for TA10865 by TMHMM2.0 at aa 21-40, 109-131, 143-165, 170-192, 205-227, 330-352, 365-387, 442-464, 483-505 and 515-537; Signal anchor predicted for TA10865 by SignalP 2.0 HMM (Signal peptide probability 0.013, signal anchor probability 0.666) with cleavage site probability 0.003 between residues 33 and 34
Signal anchor predicted for TA10865 by SignalP 2.0 HMM (Signal peptide probability 0.013, signal anchor probability 0.666) with cleavage site probability 0.003 between residues 33 and 34
double-strand break repair protein, putative
SMARTpfam:Acetyltransf (PF00583) at aa 51-133, E()=1.80e-14
2 probable transmembrane helices predicted for TA10825 by TMHMM2.0 at aa 5-27 and 73-92; Signal peptide predicted for TA10825 by SignalP 2.0 HMM (Signal peptide probability 0.967, signal anchor probability 0.001) with cleavage site probability 0.514 between residues 18 and 19
2 probable transmembrane helices predicted for TA10825 by TMHMM2.0 at aa 5-27 and 73-92
Signal peptide predicted for TA10825 by SignalP 2.0 HMM (Signal peptide probability 0.967, signal anchor probability 0.001) with cleavage site probability 0.514 between residues 18 and 19
Tap579b07.q1c.cand.126 - score = 93.50; SMART FN2 (SM00059) at aa 147-200, E()=6.51e-01; 1 probable transmembrane helix predicted for TA10815 by TMHMM2.0 at aa 7-26
1 probable transmembrane helix predicted for TA10815 by TMHMM2.0 at aa 7-26
Tap579b07.q1c.C.cand.20 - score = 15.89; SMART 2 transmembrane domains at aa 59-81 and 118-140; pfam:PAP2 (PF01569) at aa 166-278, E()=8.30e-02; 6 probable transmembrane helices predicted for TA10800 by TMHMM2.0 at aa 59-81, 118-140, 147-169, 184-206, 227-246 and 251-270
6 probable transmembrane helices predicted for TA10800 by TMHMM2.0 at aa 59-81, 118-140, 147-169, 184-206, 227-246 and 251-270
Tap579b07.q1c.C.cand.21 - score = 79.92; SMART 2 transmembrane domains at aa 59-81 and 114-133; pfam:PAP2 (PF01569) at aa 158-271, E()=7.10e-02; 6 probable transmembrane helices predicted for TA10795 by TMHMM2.0 at aa 59-81, 114-133, 146-168, 197-219, 224-243 and 253-275
6 probable transmembrane helices predicted for TA10795 by TMHMM2.0 at aa 59-81, 114-133, 146-168, 197-219, 224-243 and 253-275
Tap579b07.q1c.cand.123 - score = 15.57; SMART 5 transmembrane domains at aa 60-79, 99-121, 126-143, 148-170 and 177-199; 5 probable transmembrane helices predicted for TA10785 by TMHMM2.0 at aa 60-79, 99-121, 126-143, 148-170 and 177-199
5 probable transmembrane helices predicted for TA10785 by TMHMM2.0 at aa 60-79, 99-121, 126-143, 148-170 and 177-199
Tap579b07.q1c.C.cand.22 - score = 12.70; SMART 1 transmembrane domain at aa 24-46; 1 probable transmembrane helix predicted for TA10780 by TMHMM2.0 at aa 24-46
1 probable transmembrane helix predicted for TA10780 by TMHMM2.0 at aa 24-46
vacuolar protein sorting/secretion protein, putative
Tap579b07.q1c.cand.120 - score = 24.78; Signal peptide predicted for TA10755 by SignalP 2.0 HMM (Signal peptide probability 0.813, signal anchor probability 0.000) with cleavage site probability 0.804 between residues 22 and 23
Signal peptide predicted for TA10755 by SignalP 2.0 HMM (Signal peptide probability 0.813, signal anchor probability 0.000) with cleavage site probability 0.804 between residues 22 and 23
Tap579b07.q1c.cand.119 - score = 26.26; Signal peptide predicted for TA10740 by SignalP 2.0 HMM (Signal peptide probability 0.976, signal anchor probability 0.002) with cleavage site probability 0.295 between residues 25 and 26; GPI-Anchor Signal predicted for TA10740 by DGPI v2.04 with cleavage site probability 0.156 near 297
GPI-Anchor Signal predicted for TA10740 by DGPI v2.04 with cleavage site probability 0.156 near 297
Signal peptide predicted for TA10740 by SignalP 2.0 HMM (Signal peptide probability 0.976, signal anchor probability 0.002) with cleavage site probability 0.295 between residues 25 and 26
GATA-specific transcription factor, putative
Tap579b07.q1c.cand.118 - score = 36.27; SMART ZnF_GATA (SM00401) at aa 410-458, E()=3.23e-05; 1 probable transmembrane helix predicted for TA10735 by TMHMM2.0 at aa 38-57
1 probable transmembrane helix predicted for TA10735 by TMHMM2.0 at aa 38-57
heat shock protein (HSP90 homologue), putative
Tap579b07.q1c.C.cand.26 - score = 78.86; SMART HATPase_c (SM00387) at aa 152-314, E()=1.23e-02; pfam:HSP90 (PF00183) at aa 316-839, E()=4.90e-137; Apicoplast targetting peptide predicted by the PlasmoAP tool; 1 probable transmembrane helix predicted for TA10720 by TMHMM2.0 at aa 21-40; Signal anchor predicted for TA10720 by SignalP 2.0 HMM (Signal peptide probability 0.094, signal anchor probability 0.892) with cleavage site probability 0.042 between residues 39 and 40
Signal anchor predicted for TA10720 by SignalP 2.0 HMM (Signal peptide probability 0.094, signal anchor probability 0.892) with cleavage site probability 0.042 between residues 39 and 40
1 probable transmembrane helix predicted for TA10720 by TMHMM2.0 at aa 21-40
DNA-directed RNA polymerase III largest subunit (RPC homologue), putative
Tap579b07.q1c.cand.116 - score = 28.62; Signal peptide predicted for TA10705 by SignalP 2.0 HMM (Signal peptide probability 0.982, signal anchor probability 0.000) with cleavage site probability 0.826 between residues 19 and 20
Signal peptide predicted for TA10705 by SignalP 2.0 HMM (Signal peptide probability 0.982, signal anchor probability 0.000) with cleavage site probability 0.826 between residues 19 and 20
Tap579b07.q1c.C.cand.31 - score = 12.22; SMART 1 transmembrane domain at aa 59-81; 1 probable transmembrane helix predicted for TA10680 by TMHMM2.0 at aa 59-81
1 probable transmembrane helix predicted for TA10680 by TMHMM2.0 at aa 59-81
Tap579b07.q1c.C.cand.37 - score = 18.55; SMART 11 transmembrane domains at aa 24-46, 80-102, 107-129, 138-160, 199-221, 300-322, 337-356, 368-390, 410-432, 445-467 and 482-504; 11 probable transmembrane helices predicted for TA10645 by TMHMM2.0 at aa 24-46, 80-102, 107-129, 138-160, 199-221, 300-322, 337-356, 368-390, 410-432, 445-467 and 482-504; Signal anchor predicted for TA10645 by SignalP 2.0 HMM (Signal peptide probability 0.002, signal anchor probability 0.926) with cleavage site probability 0.000 between residues 47 and 48
Signal anchor predicted for TA10645 by SignalP 2.0 HMM (Signal peptide probability 0.002, signal anchor probability 0.926) with cleavage site probability 0.000 between residues 47 and 48
SMART 1 transmembrane domain at aa 12-31; 1 probable transmembrane helix predicted for TA10635 by TMHMM2.0 at aa 12-31
1 probable transmembrane helix predicted for TA10635 by TMHMM2.0 at aa 12-31
casein kinase II, alpha subunit, putative
Succinyl-CoA ligase [GDP-forming] alpha-chain, mitochondrial precursor
Tap579b07.q1c.C.cand.42 - score = 28.14; SMART 1 transmembrane domain at aa 5-27; 1 probable transmembrane helix predicted for TA10615 by TMHMM2.0 at aa 5-27
1 probable transmembrane helix predicted for TA10615 by TMHMM2.0 at aa 5-27
Tap579b07.q1c.cand.109 - score = 9.36; SMART 4 transmembrane domains at 13-35, 40-62, 75-97 and 112-134; 4 probable transmembrane helices predicted for TA10590 by TMHMM2.0 at aa 13-35, 40-62, 75-97 and 112-134
4 probable transmembrane helices predicted for TA10590 by TMHMM2.0 at aa 13-35, 40-62, 75-97 and 112-134
Tap579b07.q1c.cand.106 - score = 37.48; SMART 1 transmembrane domain at aa 97-119; 2 probable transmembrane helices predicted for TA10570 by TMHMM2.0 at aa 7-29 and 97-119
2 probable transmembrane helices predicted for TA10570 by TMHMM2.0 at aa 7-29 and 97-119
SMART 5 transmembrane domains at aa 170-192, 205-239, 317-339, 346-368 and 388-410; 5 probable transmembrane helices predicted for TA10555 by TMHMM2.0 at aa 170-192, 205-239, 317-339, 346-368 and 388-410
5 probable transmembrane helices predicted for TA10555 by TMHMM2.0 at aa 170-192, 205-239, 317-339, 346-368 and 388-410
Tap579b07.q1c.C.cand.48 - score = 31.86; SMART pfam:TIM (PF00121) at aa 118-365, E()=8.70e-21; 1 probable transmembrane helix predicted for TA10540 by TMHMM2.0 at aa 21-43
1 probable transmembrane helix predicted for TA10540 by TMHMM2.0 at aa 21-43
Tap579b07.q1c.cand.102 - score = 51.72; SMART 5 EFh (SM00054) domains at aa 45-73, E()=7.93e-01; 81-109, E()=6.16e-02; 121-149, E()=5.53e+00; 158-186, E()=3.25e-01 and 192-220, E()=2.04e+00; concerned of calling too much for a function; Signal peptide predicted for TA10510 by SignalP 2.0 HMM (Signal peptide probability 0.706, signal anchor probability 0.000) with cleavage site probability 0.449 between residues 21 and 22
Signal peptide predicted for TA10510 by SignalP 2.0 HMM (Signal peptide probability 0.706, signal anchor probability 0.000) with cleavage site probability 0.449 between residues 21 and 22
heat-shock (HSP70 homologue) protein, putative
Tap579b07.q1c.cand.101 - score = 70.63; SMART pfam:HSP70 (PF00012) at aa 38-638, E()=0.00e+00; pfam:Hydantoinase_A (PF01968) at aa 157-411, E()=7.20e-02; pfam:UVR (PF02151) at aa 590-628, E()=1.00e-01; Signal peptide predicted for TA10500 by SignalP 2.0 HMM (Signal peptide probability 0.827, signal anchor probability 0.000) with cleavage site probability 0.784 between residues 26 and 27
Signal peptide predicted for TA10500 by SignalP 2.0 HMM (Signal peptide probability 0.827, signal anchor probability 0.000) with cleavage site probability 0.784 between residues 26 and 27
molecular chaperone (DnaJ family), putative
Tap579b07.q1c.cand.98 - score = 50.55; SMART DnaJ (SM00271) at aa 22-77, E()=5.14e-25; Signal peptide predicted for TA10480 by SignalP 2.0 HMM (Signal peptide probability 0.847, signal anchor probability 0.023) with cleavage site probability 0.449 between residues 20 and 21
Signal peptide predicted for TA10480 by SignalP 2.0 HMM (Signal peptide probability 0.847, signal anchor probability 0.023) with cleavage site probability 0.449 between residues 20 and 21
Tap579b07.q1c.cand.98 - score = 50.55; SMART 2 transmembrane domains at aa 59-81 and 85-104; pfam:Acetyltransf (PF00583) at aa 198-276, E()=3.90e-10; 2 probable transmembrane helices predicted for TA10470 by TMHMM2.0 at aa 59-81 and 85-104
2 probable transmembrane helices predicted for TA10470 by TMHMM2.0 at aa 59-81 and 85-104
Tap579b07.q1c.cand.96 - score = 70.12; SMART 1 transmembrane domain at aa 12-31; SEL1 (SM00671) at aa 86-125, E()=8.19e-02; 126-163, E()=1.75e-01; 289-324, E()=1.25e-06; 325-367, E()=6.76e+00; 410-445, E()=3.67e+01; 1 probable transmembrane helix predicted for TA10450 by TMHMM2.0 at aa 12-31; Signal anchor predicted for TA10450 by SignalP 2.0 HMM (Signal peptide probability 0.005, signal anchor probability 0.886) with cleavage site probability 0.002 between residues 27 and 28
1 probable transmembrane helix predicted for TA10450 by TMHMM2.0 at aa 12-31
Signal anchor predicted for TA10450 by SignalP 2.0 HMM (Signal peptide probability 0.005, signal anchor probability 0.886) with cleavage site probability 0.002 between residues 27 and 28
Tap579b07.q1c.C.cand.63 - score = 52.28; SMART pfam:ATP-synt_ab_N (PF02874) at aa 41-96, E()=2.80e-12; pfam:ATP-synt_ab (PF00006) at aa 283-475, E()=2.00e-79; pfam:ATP-synt_ab-C (PF00306) at aa 483-630, E()=1.50e-36; 1 probable transmembrane helix predicted for TA10370 by TMHMM2.0 at aa 21-43
1 probable transmembrane helix predicted for TA10370 by TMHMM2.0 at aa 21-43
tRNA-splicing endonuclease, SEN1 homologue, putative
Tap579b07.q1c.C.cand.65 - score = 24.90; SMART 1 transmembrane domain at aa 365-387; 1 probable transmembrane helix predicted for TA10345 by TMHMM2.0 at aa 365-387; GPI-Anchor Signal predicted for TA10345 by DGPI v2.04, no cleavage site predicted
1 probable transmembrane helix predicted for TA10345 by TMHMM2.0 at aa 365-387
branched-chain alpha-keto acid dehydrogenase E1, subunit, putative
Tap579b07.q1c.cand.88 - score = 23.19; SMART pfam:SDF (PF00375) at aa 32-452, E()=5.40e-06; 10 probable transmembrane helices predicted for TA10315 by TMHMM2.0 at aa 23-45, 71-93, 106-128, 194-213, 233-255, 270-292, 305-324, 344-366, 378-400 and 404-426; Signal anchor predicted for TA10315 by SignalP 2.0 HMM (Signal peptide probability 0.002, signal anchor probability 0.944) with cleavage site probability 0.001 between residues 47 and 48
Signal anchor predicted for TA10315 by SignalP 2.0 HMM (Signal peptide probability 0.002, signal anchor probability 0.944) with cleavage site probability 0.001 between residues 47 and 48
6 probable transmembrane helices predicted for TA10300 by TMHMM2.0 at aa 24-46, 67-89, 117-135, 213-235, 250-272 and 297-319
Tap579b07.q1c.C.cand.70 - score = 41.31; Signal peptide predicted for TA10285 by SignalP 2.0 HMM (Signal peptide probability 0.998, signal anchor probability 0.000) with cleavage site probability 0.859 between residues 17 and 18
Signal peptide predicted for TA10285 by SignalP 2.0 HMM (Signal peptide probability 0.998, signal anchor probability 0.000) with cleavage site probability 0.859 between residues 17 and 18
vacuolar H+ ATPase, 116 kDa subunit, putative
6 probable transmembrane helices predicted for TA10280 by TMHMM2.0 at aa 471-493, 513-535, 599-621, 628-650, 696-718 and 864-886
Tap579b07.q1c.cand.85 - score = 37.03; SMART pfam:MMR_HSR1 (PF01926) at aa 81-401, E()=3.40e-05; pfam:GTP_EFTU (PF00009) at aa 196-388, E()=5.00e-02; Signal peptide predicted for TA10275 by SignalP 2.0 HMM (Signal peptide probability 0.841, signal anchor probability 0.000) with cleavage site probability 0.813 between residues 16 and 17
Signal peptide predicted for TA10275 by SignalP 2.0 HMM (Signal peptide probability 0.841, signal anchor probability 0.000) with cleavage site probability 0.813 between residues 16 and 17
mitochondrial large subunit ribosomal protein, putative
eukaryotic translation initiation factor 3 (subunit 8), putative
Tap579b07.q1c.C.cand.75 - score = 71.56; SMART 1 transmembrane domain at aa 12-31; 1 probable transmembrane helix predicted for TA10230 by TMHMM2.0 at aa 12-31; Signal peptide predicted for TA10230 by SignalP 2.0 HMM (Signal peptide probability 0.828, signal anchor probability 0.155) with cleavage site probability 0.739 between residues 30 and 31
Signal peptide predicted for TA10230 by SignalP 2.0 HMM (Signal peptide probability 0.828, signal anchor probability 0.155) with cleavage site probability 0.739 between residues 30 and 31
1 probable transmembrane helix predicted for TA10230 by TMHMM2.0 at aa 12-31
16S rRNA processing protein (RimM homologue), putative
Tap579b07.q1c.C.cand.79 - score = 13.80; SMART 1 transmembrane domain at aa 138-160; 1 probable transmembrane helix predicted for TA10175 by TMHMM2.0 at aa 138-160
1 probable transmembrane helix predicted for TA10175 by TMHMM2.0 at aa 138-160
nucleoside diphosphate hydrolase, putative
Tap579b07.q1c.C.cand.86 - score = 10.61; SMART pfam:DER1 (PF04511) at aa 14-212, E()=2.80e-34; 5 probable transmembrane helices predicted for TA10110 by TMHMM2.0 at aa 20-37, 57-79, 91-113, 117-139 and 159-181; Signal anchor predicted for TA10110 by SignalP 2.0 HMM (Signal peptide probability 0.016, signal anchor probability 0.950) with cleavage site probability 0.009 between residues 39 and 40
Signal anchor predicted for TA10110 by SignalP 2.0 HMM (Signal peptide probability 0.016, signal anchor probability 0.950) with cleavage site probability 0.009 between residues 39 and 40
5 probable transmembrane helices predicted for TA10110 by TMHMM2.0 at aa 20-37, 57-79, 91-113, 117-139 and 159-181
ubiquitin C-terminal hydrolase, putative
Tap579b07.q1c.cand.64 - score = 34.20; SMART 4 WD40 (SM00320) domains at aa 66-106, E()=2.82e-08; 115-155, E()=1.26e-05; 160-196, E()=3.82e+01; 199-246, E()=9.21e+00; 1 probable transmembrane helix predicted for TA10060 by TMHMM2.0 at aa 39-61; Signal anchor predicted for TA10060 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 0.992) with cleavage site probability 0.000 between residues 57 and 58
1 probable transmembrane helix predicted for TA10060 by TMHMM2.0 at aa 39-61
Signal anchor predicted for TA10060 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 0.992) with cleavage site probability 0.000 between residues 57 and 58
Tap579b07.q1c.C.cand.89 - score = 86.32; Signal peptide predicted for TA10055 by SignalP 2.0 HMM (Signal peptide probability 0.840, signal anchor probability 0.000) with cleavage site probability 0.184 between residues 31 and 32
Signal peptide predicted for TA10055 by SignalP 2.0 HMM (Signal peptide probability 0.840, signal anchor probability 0.000) with cleavage site probability 0.184 between residues 31 and 32
vacuolar protein sorting (Vps) 26 homologue, putative
Tap579b07.q1c.cand.59 - score = 165.13; SMART 2 transmembrane domains at aa 349-371 and 378-400; 2 probable transmembrane helices predicted for TA10000 by TMHMM2.0 at aa 349-371 and 378-400
2 probable transmembrane helices predicted for TA10000 by TMHMM2.0 at aa 349-371 and 378-400
Tap579b07.q1c.cand.58 - score = 37.73; SMART 1 transmembrane domain at aa 178-200; 1 probable transmembrane helix predicted for TA09990 by TMHMM2.0 at aa 178-200
1 probable transmembrane helix predicted for TA09990 by TMHMM2.0 at aa 178-200
cell-cycle-related serine/threonine protein kinase, CDK homologue, putative
SMART pfam:PRP38 (PF03371) at aa 124-306, E()=5.00e-12; 1 transmembrane domain at aa 496-513; 1 probable transmembrane helix predicted for TA09950 by TMHMM2.0 at aa 496-513
1 probable transmembrane helix predicted for TA09950 by TMHMM2.0 at aa 496-513
Tap579b07.q1c.C.cand.95 - score = 31.83; SMART 1 transmembrane domain at aa 242-264; 1 probable transmembrane helix predicted for TA09945 by TMHMM2.0 at aa 242-264
1 probable transmembrane helix predicted for TA09945 by TMHMM2.0 at aa 242-264
Tap579b07.q1c.cand.52 - score = 70.43; SMART 1 transmembrane domain at aa 7-29; pfam:Fibrillarin (PF01269) at aa 70-312, E()=2.00e-155; 1 probable transmembrane helix predicted for TA09940 by TMHMM2.0 at aa 7-29
1 probable transmembrane helix predicted for TA09940 by TMHMM2.0 at aa 7-29
SMART pfam:Radical_SAM (PF04055) at aa 103-272, E()=6.30e-11
6 probable transmembrane helices predicted for TA09925 by TMHMM2.0 at aa 32-54, 83-102, 117-139, 159-178, 193-215 and 217-239
vacuolar protein sorting, VPS29 homologue, putative
endopeptidase (CLP homologue) ATP-binding chain, putative
Tap579b07.q1c.cand.48 - score = 51.40; SMART pfam:PPR (PF01535) at aa 224-258, E()=3.20e-05; Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal anchor predicted for TA09905 by SignalP 2.0 HMM (Signal peptide probability 0.183, signal anchor probability 0.714) with cleavage site probability 0.036 between residues 40 and 41
Signal anchor predicted for TA09905 by SignalP 2.0 HMM (Signal peptide probability 0.183, signal anchor probability 0.714) with cleavage site probability 0.036 between residues 40 and 41
5 probable transmembrane helices predicted for TA09895 by TMHMM2.0 at aa 127-149, 227-249, 259-281, 286-308 and 328-350
Tap579b07.q1c.cand.46 - score = 64.75; SMART pfam:Ubie_methyltran (PF01209) at aa 32-319, E()=2.40e-78; GPI-Anchor Signal predicted for TA09885 by DGPI v2.04, no cleavage site predicted
microtubule-associated protein (YTM1 homologue), putative
Tap579b07.q1c.C.cand.100 - score = 77.99; SMART 2 transmembrane domains at aa 21-40, 78-100; 2 probable transmembrane helices predicted for TA09845 by TMHMM2.0 at aa 21-40 and 78-100
2 probable transmembrane helices predicted for TA09845 by TMHMM2.0 at aa 21-40 and 78-100
DNA polymerase epsilon (catalytic subunit), putative
Tap579b07.q1c.cand.43 - score = 11.68; SMART 1 transmembrane domain at aa 99-121; 1 probable transmembrane helix predicted for TA09825 by TMHMM2.0 at aa 99-121
1 probable transmembrane helix predicted for TA09825 by TMHMM2.0 at aa 99-121
DEAD-box family ATP-dependent helicase, putative
SMART pfam:Tfb4 (PF03850) at aa 27-370, E()=1.10e-04; 5 probable transmembrane helices predicted for TA11370 by TMHMM2.0 at aa 56-78, 98-120, 169-191, 277-299 and 330-352
5 probable transmembrane helices predicted for TA11370 by TMHMM2.0 at aa 56-78, 98-120, 169-191, 277-299 and 330-352
endoplasmic reticulum lumen protein retaining receptor (ERD2 homologue), putative
Tap579b07.q1c.cand.40 - score = 7.94; SMART pfam:ER_lumen_recept (PF00810) at aa 2-209, E()=1.00e-111; 3 probable transmembrane helices predicted for TA11365 by TMHMM2.0 at aa 60-82, 103-125 and 182-204; Signal peptide predicted for TA11365 by SignalP 2.0 HMM (Signal peptide probability 0.733, signal anchor probability 0.063) with cleavage site probability 0.459 between residues 28 and 29
3 probable transmembrane helices predicted for TA11365 by TMHMM2.0 at aa 60-82, 103-125 and 182-204
Signal peptide predicted for TA11365 by SignalP 2.0 HMM (Signal peptide probability 0.733, signal anchor probability 0.063) with cleavage site probability 0.459 between residues 28 and 29
SMART 3 transmembrane domains at aa 36-58, 93-115 and 128-150; ZnF_NFX (SM00438) at aa 547-562, E()=0.00e+00; Apicoplast targetting peptide predicted by the PlasmoAP tool; 3 probable transmembrane helices predicted for TA11360 by TMHMM2.0 at aa 36-58, 93-115 and 128-150; Signal anchor predicted for TA11360 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 0.993) with cleavage site probability 0.000 between residues 62 and 63
3 probable transmembrane helices predicted for TA11360 by TMHMM2.0 at aa 36-58, 93-115 and 128-150
Signal anchor predicted for TA11360 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 0.993) with cleavage site probability 0.000 between residues 62 and 63
SMART 2 transmembrane domains at aa 113-135 and 140-162; 2 probable transmembrane helices predicted for TA11355 by TMHMM2.0 at aa 113-135 and 140-162
2 probable transmembrane helices predicted for TA11355 by TMHMM2.0 at aa 113-135 and 140-162
vacuolar proton-translocating ATPase, putative
Tap579b07.q1c.cand.36 - score = 63.24; SMART pfam:ATP-synt_C (PF00137) at aa 17-82, E()=3.30e-04; 113-178, E()=5.80e-09; 4 probable transmembrane helices predicted for TA11325 by TMHMM2.0 at aa 15-37, 58-80, 115-137 and 157-179; Signal anchor predicted for TA11325 by SignalP 2.0 HMM (Signal peptide probability 0.078, signal anchor probability 0.910) with cleavage site probability 0.053 between residues 36 and 37
4 probable transmembrane helices predicted for TA11325 by TMHMM2.0 at aa 15-37, 58-80, 115-137 and 157-179
Signal anchor predicted for TA11325 by SignalP 2.0 HMM (Signal peptide probability 0.078, signal anchor probability 0.910) with cleavage site probability 0.053 between residues 36 and 37
Tap579b07.q1c.C.cand.109 - score = 12.55; SMART pfam:V-SNARE (PF05008) at aa 103-245, E()=4.00e-02; 1 transmembrane domain at aa 247-266; 1 probable transmembrane helix predicted for TA11320 by TMHMM2.0 at aa 247-266
1 probable transmembrane helix predicted for TA11320 by TMHMM2.0 at aa 247-266
40S ribosomal protein S7 (RPS7), putative
Tap579b07.q1c.C.cand.121 - score = 49.00; SMART 1 transmembrane domain at aa 5-27; pfam:Peptidase_M22 (PF00814) at aa 97-403, E()=5.90e-56; 1 probable transmembrane helix predicted for TA11230 by TMHMM2.0 at aa 5-27; Signal peptide predicted for TA11230 by SignalP 2.0 HMM (Signal peptide probability 0.846, signal anchor probability 0.000) with cleavage site probability 0.372 between residues 17 and 18
Signal peptide predicted for TA11230 by SignalP 2.0 HMM (Signal peptide probability 0.846, signal anchor probability 0.000) with cleavage site probability 0.372 between residues 17 and 18
1 probable transmembrane helix predicted for TA11230 by TMHMM2.0 at aa 5-27
30S ribosomal protein S10-like protein, putative
signal recognition particle (SRP), 68-kDa subunit, putative
nascent polypeptide associated complex (NAC), alpha chain, putative
vesicle trafficking protein (SEC7 homologue), putative
N-acetylglucosaminyl transferase, putative
SMART pfam:Amidohydro_1 (PF01979) at aa 3-361, E()=1.80e-06
S-adenosylmethionne synthetase, putative
glutamyl-tRNA amidotransferase, subunit, putative
Tap579b07.q1c.C.cand.139 - score = 39.29; C terminal extensio clearly relies on P. yoelii; SMART pfam:Amidase (PF01425) at aa 65-519, E()=1.90e-37; 1 probable transmembrane helix predicted for TA11065 by TMHMM2.0 at aa 475-497
1 probable transmembrane helix predicted for TA11065 by TMHMM2.0 at aa 475-497
Tap579b07.q1c.C.cand.140 - score = 31.16; SMART RING (SM00184) at aa 23-61, E()=9.37e-10; 2 transmembrane domains at aa 114-133, 166-188; 2 probable transmembrane helices predicted for TA11060 by TMHMM2.0 at aa 114-133 and 166-188
2 probable transmembrane helices predicted for TA11060 by TMHMM2.0 at aa 114-133 and 166-188
calcium-binding protein; SMART pfam:efhand (PF00036) at aa 76-104, E()=3.10e-03
Tap579b07.q1c.cand.16 - score = 42.16; 1 probable transmembrane helix predicted for TA11050 by TMHMM2.0 at aa 9-31; Signal peptide predicted for TA11050 by SignalP 2.0 HMM (Signal peptide probability 0.676, signal anchor probability 0.317) with cleavage site probability 0.439 between residues 25 and 26
1 probable transmembrane helix predicted for TA11050 by TMHMM2.0 at aa 9-31
Signal peptide predicted for TA11050 by SignalP 2.0 HMM (Signal peptide probability 0.676, signal anchor probability 0.317) with cleavage site probability 0.439 between residues 25 and 26
phosphoinositide binding protein (SEC14 homologue), putative
Tap579b07.q1c.cand.13 - score = 14.92; SMART 3 transmembrane domains at aa 218-240, 253-275 and 290-311; 3 probable transmembrane helices predicted for TA10860 by TMHMM2.0 at aa 218-240, 253-275 and 290-311
3 probable transmembrane helices predicted for TA10860 by TMHMM2.0 at aa 218-240, 253-275 and 290-311
Tap579b07.q1c.cand.12 - score = 11.97; SMART 2 transmembrane domains at aa 180-202 and 233-255; 2 probable transmembrane helices predicted for TA10750 by TMHMM2.0 at aa 180-202 and 233-255
2 probable transmembrane helices predicted for TA10750 by TMHMM2.0 at aa 180-202 and 233-255
ubiquitin-conjugating enzyme E2, putative
SMART 2 transmembrane domains at aa 21-39 and 59-81; pfam:Nucleoplasmin (PF03066) at aa 87-230, E()=7.10e-03; 2 probable transmembrane helices predicted for TA10310 by TMHMM2.0 at aa 21-39 and 59-81; Signal anchor predicted for TA10310 by SignalP 2.0 HMM (Signal peptide probability 0.003, signal anchor probability 0.794) with cleavage site probability 0.001 between residues 34 and 35
2 probable transmembrane helices predicted for TA10310 by TMHMM2.0 at aa 21-39 and 59-81
Signal anchor predicted for TA10310 by SignalP 2.0 HMM (Signal peptide probability 0.003, signal anchor probability 0.794) with cleavage site probability 0.001 between residues 34 and 35
DNA-directed RNA polymerase, subunit (RPB5 homologue), putative
ubiquinol-cytochrome c reductase, putative
Tap579b07.q1c.C.cand.147 - score = 28.94; SMART pfam:Rieske (PF00355) at aa 238-343, E()=3.80e-09; 1 probable transmembrane helix predicted for TA10085 by TMHMM2.0 at aa 176-198
1 probable transmembrane helix predicted for TA10085 by TMHMM2.0 at aa 176-198
(subtelomeric) ABC-transporter protein family member, putative
Tap579b07.q1c.C.cand.149 - score = 16.32; Signal peptide predicted for TA09975 by SignalP 2.0 HMM (Signal peptide probability 0.901, signal anchor probability 0.078) with cleavage site probability 0.605 between residues 22 and 23
Signal peptide predicted for TA09975 by SignalP 2.0 HMM (Signal peptide probability 0.901, signal anchor probability 0.078) with cleavage site probability 0.605 between residues 22 and 23
Theileria-specific sub-telomeric protein, SVSP family
Tap579b07.q1c.C.cand.151 - score = 38.90; 1 probable transmembrane helix predicted for TA09865 by TMHMM2.0 at aa 5-24; Signal peptide predicted for TA09865 by SignalP 2.0 HMM (Signal peptide probability 0.700, signal anchor probability 0.292) with cleavage site probability 0.677 between residues 23 and 24
Signal peptide predicted for TA09865 by SignalP 2.0 HMM (Signal peptide probability 0.700, signal anchor probability 0.292) with cleavage site probability 0.677 between residues 23 and 24
1 probable transmembrane helix predicted for TA09865 by TMHMM2.0 at aa 5-24
Theileria-specific sub-telomeric protein, SVSP family member, putative
Tap579b07.q1c.C.cand.152 - score = 14.18; 1 probable transmembrane helix predicted for TA09810 by TMHMM2.0 at aa 13-35; Signal anchor predicted for TA09810 by SignalP 2.0 HMM (Signal peptide probability 0.001, signal anchor probability 0.720) with cleavage site probability 0.000 between residues 40 and 41
Signal anchor predicted for TA09810 by SignalP 2.0 HMM (Signal peptide probability 0.001, signal anchor probability 0.720) with cleavage site probability 0.000 between residues 40 and 41
1 probable transmembrane helix predicted for TA09810 by TMHMM2.0 at aa 13-35
Tap579b07.q1c.C.cand.153 - score = 36.40; Signal peptide predicted for TA09805 by SignalP 2.0 HMM (Signal peptide probability 0.867, signal anchor probability 0.063) with cleavage site probability 0.449 between residues 21 and 22
Signal peptide predicted for TA09805 by SignalP 2.0 HMM (Signal peptide probability 0.867, signal anchor probability 0.063) with cleavage site probability 0.449 between residues 21 and 22
Tap579b07.q1c.C.cand.154 - score = 42.52; Signal peptide predicted for TA09800 by SignalP 2.0 HMM (Signal peptide probability 0.867, signal anchor probability 0.063) with cleavage site probability 0.449 between residues 21 and 22
Signal peptide predicted for TA09800 by SignalP 2.0 HMM (Signal peptide probability 0.867, signal anchor probability 0.063) with cleavage site probability 0.449 between residues 21 and 22
Tap579b07.q1c.C.cand.155 - score = 33.22; Signal peptide predicted for TA09795 by SignalP 2.0 HMM (Signal peptide probability 0.914, signal anchor probability 0.000) with cleavage site probability 0.885 between residues 18 and 19
Signal peptide predicted for TA09795 by SignalP 2.0 HMM (Signal peptide probability 0.914, signal anchor probability 0.000) with cleavage site probability 0.885 between residues 18 and 19
Tap579b07.q1c.C.cand.156 - score = 46.01; Signal peptide predicted for TA09790 by SignalP 2.0 HMM (Signal peptide probability 0.867, signal anchor probability 0.063) with cleavage site probability 0.449 between residues 21 and 22
Signal peptide predicted for TA09790 by SignalP 2.0 HMM (Signal peptide probability 0.867, signal anchor probability 0.063) with cleavage site probability 0.449 between residues 21 and 22
Tap579b07.q1c.C.cand.157 - score = 155.73; 1 probable transmembrane helix predicted for TA09785 by TMHMM2.0 at aa 5-22; Signal peptide predicted for TA09785 by SignalP 2.0 HMM (Signal peptide probability 0.961, signal anchor probability 0.039) with cleavage site probability 0.936 between residues 20 and 21
Signal peptide predicted for TA09785 by SignalP 2.0 HMM (Signal peptide probability 0.961, signal anchor probability 0.039) with cleavage site probability 0.936 between residues 20 and 21
1 probable transmembrane helix predicted for TA09785 by TMHMM2.0 at aa 5-22
Tap579b07.q1c.C.cand.158 - score = 49.60; SMART pfam:DUF529 (PF04385) at aa 145-286, E()=4.30e-73; 329-478, E()=1.10e-59; 543-681, E()=2.50e-74; Signal peptide predicted for TA09775 by SignalP 2.0 HMM (Signal peptide probability 0.875, signal anchor probability 0.000) with cleavage site probability 0.791 between residues 25 and 26
Signal peptide predicted for TA09775 by SignalP 2.0 HMM (Signal peptide probability 0.875, signal anchor probability 0.000) with cleavage site probability 0.791 between residues 25 and 26
Signal peptide predicted for TA09770 by SignalP 2.0 HMM (Signal peptide probability 0.975, signal anchor probability 0.000) with cleavage site probability 0.696 between residues 25 and 26