Plasmodium reichenowi strain SY57 chromosome 10, whole genome shotgun sequence.
Eukaryota; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania).
Genomes of cryptic chimpanzee Plasmodium species reveal key evolutionary events leading to human malaria
Submitted (10-FEB-2017) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA
Submitted (07-MAR-2016) Department of Medicine, Perelman School of Medicine, University of Pennsylvania, 409 Johnson Pavilion, 3610 Hamilton Walk, Philadelphia, PA 19104, USA
PROVISIONAL REFSEQ: This record has not yet been subject to final\nNCBI review. The reference sequence is identical to CM003851.\nAssembly created using Velvet Columbus followed by PAGIT and\nGapFiller.\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Velvet v. 1.1.06; PAGIT v. 1; GapFiller v.\n 1.11\nGenome Coverage :: 200x\nSequencing Technology :: Illumina MiSeq\n##Genome-Assembly-Data-END##
erythrocyte membrane protein 1; ortholog of PRCDC_1000300; truncated pseudogene
acyl-CoA binding protein, isoform 1, ACBP1
acyl-CoA binding protein, isoform 2, ACBP2
conserved Plasmodium protein, unknown function
inner membrane complex protein 1c, putative
U5 small nuclear ribonuclear protein, putative
conserved Plasmodium membrane protein, unknown function
putative regulator of nonsense transcripts
gap found within coding sequence; ortholog of PRCDC_1005100
part of same gene as PRSY57_1005100A; gap found within coding sequence
part of same gene as PRSY57_1005100B; gap found within coding sequence
gap found within coding sequence; ortholog of PRCDC_1005400
conserved Plasmodium protein, unknown function; part of same gene as PRSY57_1005400A; gap found within coding sequence
conserved Plasmodium protein, unknown function; part of same gene as PRSY57_1005400B; gap found within coding sequence
gap found within coding sequence; ortholog of PRCDC_1006300
part of same gene as PRSY57_1006300B; gap found within coding sequence
part of same gene as PRSY57_1006300A; gap found within coding sequence
conserved membrane protein, unknown function
gap found within coding sequence; ortholog of PRCDC_1006600
part of same gene as PRSY57_1006600A; gap found within coding sequence
part of same gene as PRSY57_1006600B; gap found within coding sequence
eukaryotic translation initiation factor 3 subunit 7, putative
hypothetical protein; ortholog of PRCDC_1007700
26S protease regulatory subunit 4, putative
zinc finger C-x8-C-x5-C-x3-H type, putative
small subunit rRNA synthesis-associated protein, putative
ribosomal protein L43, mitochondrial, putative
succinate dehydrogenase subunit 4, putative
gap found within coding sequence; ortholog of PRCDC_1009800
conserved Plasmodium protein, unknown function; part of same gene as PRSY57_1009800A; gap found within coding sequence
conserved Plasmodium protein, unknown function; part of same gene as PRSY57_1009800B; gap found within coding sequence
eukaryotic translation initiation factor 2 beta subunit, putative
gap found within coding sequence; ortholog of PRCDC_1010100
dolichyl-phosphate-mannose protein mannosyltransferase, putative
part of same gene as PRSY57_1010100B; gap found within coding sequence
part of same gene as PRSY57_1010100A; gap found within coding sequence
50S ribosomal protein L22, mitochondrial, putative
gap found within coding sequence; ortholog of PRCDC_1010300
conserved Plasmodium protein, unknown function; part of same gene as PRSY57_1010300B; gap found within coding sequence
conserved Plasmodium protein, unknown function; part of same gene as PRSY57_1010300A; gap found within coding sequence
inner membrane complex sub-compartment protein 1, putative
encoded by transcript variant 2; alternatively spliced
encoded by transcript variant 1; alternatively spliced
conserved Plasmodium protein, unknown function; transcript variant 2; alternatively spliced
conserved Plasmodium protein, unknown function; transcript variant 1; alternatively spliced
proteasome subunit beta type-5, putative
ubiquinol-cytochrome c reductase complex subunit, putative
hypoxanthine-guanine phosphoribosyltransferase
NLI interacting factor-like phosphatase, putative
U3 snoRNA-associated small subunit rRNA processing protein, putative
phosphoinositide-specific phospholipase C
initiation factor 2 subunit family, putative
male gamete fusion factor HAP2, putative
transcriptional coactivator ADA2, putative
transcript variant 2; alternatively spliced
transcript variant 1; alternatively spliced
gap found within coding sequence; ortholog of PRCDC_1015200
ribonucleotide reductase small subunit, putative
part of same gene as PRSY57_1015200B; gap found within coding sequence
part of same gene as PRSY57_1015200A; gap found within coding sequence
serine/threonine protein kinase, FIKK family
enoyl-CoA hydratase-related protein, putative
26S proteasome regulatory subunit p55, putative
serine/threonine protein phosphatase 8, putative
eukaryotic translation initiation factor subunit eIF2A, putative
gap found within coding sequence; ortholog of PRCDC_1018900
conserved Plasmodium membrane protein, unknown function; part of same gene as PRSY57_1018900B.2, PRSY57_1018900B.1, PRSY57_1018900A; gap found within coding sequence
conserved Plasmodium membrane protein, unknown function; part of same gene as PRSY57_1018900C, PRSY57_1018900B.1, PRSY57_1018900A; transcript variant 2; alternatively spliced; gap found within coding sequence
conserved Plasmodium membrane protein, unknown function; part of same gene as PRSY57_1018900C, PRSY57_1018900B.2, PRSY57_1018900A; transcript variant 1; alternatively spliced; gap found within coding sequence
conserved Plasmodium membrane protein, unknown function; part of same gene as PRSY57_1018900C, PRSY57_1018900B.2, PRSY57_1018900B.1; gap found within coding sequence
gap found within coding sequence; ortholog of PRCDC_1019400
large subunit rRNA processing RRM protein, putative
part of same gene as PRSY57_1019400A; gap found within coding sequence
part of same gene as PRSY57_1019400B; gap found within coding sequence
flagellar outer arm dynein-associated protein, putative
cytoplasmic dynein intermediate chain, putative
S-adenosyl-L-methionine-dependent methyltransferase, putative
dihydrolipoamide acyltransferase component E2
deoxyribose-phosphate aldolase, putative
conserved Plasmodium protein (10b antigen), unknown function
citrate synthase, mitochondrial precursor, putative
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
CDGSH iron-sulfur domain-containing protein, putative
orotidine 5'-phosphate decarboxylase, putative
gap found within coding sequence; ortholog of PRCDC_1022800
part of same gene as PRSY57_1022800B; gap found within coding sequence
part of same gene as PRSY57_1022800A; gap found within coding sequence
glutamine--fructose-6-phosphate aminotransferase [isomerizing], putative
gap found within coding sequence; ortholog of PRCDC_1024800
conserved Plasmodium membrane protein, unknown function; part of same gene as PRSY57_1024800A; gap found within coding sequence
conserved Plasmodium membrane protein, unknown function; part of same gene as PRSY57_1024800B; gap found within coding sequence
cytochrome c oxidase copper chaperone, putative
cell division cycle protein 20-like protein
biotin--acetyl-CoA-carboxylase, putative
U3 small nucleolar ribonucleoprotein MPP10, putative
mitochondrial ribosomal protein S22 precursor, putative
DNA-directed RNA polymerase II, putative
gap found within coding sequence; ortholog of PRCDC_1027300
part of same gene as PRSY57_1027300B; gap found within coding sequence
part of same gene as PRSY57_1027300A; gap found within coding sequence
nucleolar preribosomal assembly protein, putative
hypothetical protein; ortholog of PRCDC_1028300
transcription elongation factor SPT4, putative
26S proteasome regulatory subunit RPN9, putative
25 kDa ookinete surface antigen precursor
gap found within coding sequence; ortholog of PRCDC_1030700
part of same gene as PRSY57_1030700A.1, PRSY57_1030700B; transcript variant 2; alternatively spliced; gap found within coding sequence
part of same gene as PRSY57_1030700A.2, PRSY57_1030700B; transcript variant 1; alternatively spliced; gap found within coding sequence
part of same gene as PRSY57_1030700A.2, PRSY57_1030700A.1; gap found within coding sequence
protein phosphatase inhibitor 3, putative
ribosome maturation factor RimM, putative
mRNA-decapping enzyme subunit 1, putative
phosphatidylinositol N- acetylglucosaminyltransferase subunit A, putative
RNA polymerase II-associated protein 1, putative
S-adenosylmethionine decarboxylase/ornithine decarboxylase
apicoplast ribosomal protein L27 precursor, putative
thioredoxin-like associated protein 2, putative
flavoprotein subunit of succinate dehydrogenase
U2 snRNA/tRNA pseudouridine synthase, putative
DNA polymerase zeta catalytic subunit, putative
ADP/ATP transporter on adenylate translocase
gap found within coding sequence; ortholog of PRCDC_1037000
conserved Plasmodium protein, unknown function; part of same gene as PRSY57_1037000A; gap found within coding sequence
conserved Plasmodium protein, unknown function; part of same gene as PRSY57_1037000B; gap found within coding sequence