Plasmodium reichenowi strain SY57 chromosome 9, whole genome shotgun sequence.
Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania).
Genomes of cryptic chimpanzee Plasmodium species reveal key evolutionary events leading to human malaria
Submitted (10-FEB-2017) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA
Submitted (07-MAR-2016) Department of Medicine, Perelman School of Medicine, University of Pennsylvania, 409 Johnson Pavilion, 3610 Hamilton Walk, Philadelphia, PA 19104, USA
PROVISIONAL REFSEQ: This record has not yet been subject to final\nNCBI review. The reference sequence is identical to CM003850.\nAssembly created using Velvet Columbus followed by PAGIT and\nGapFiller.\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Velvet v. 1.1.06; PAGIT v. 1; GapFiller v.\n 1.11\nGenome Coverage :: 200x\nSequencing Technology :: Illumina MiSeq\n##Genome-Assembly-Data-END##
serine/threonine protein kinase, FIKK family
serine/threonine protein kinase, FIKK family; ortholog of PRCDC_0900300
serine/threonine protein kinase, FIKK family; ortholog of PRCDC_0900600
conserved Plasmodium protein, unknown function
putative retrieval receptor for endoplasmic reticulum membrane proteins
conserved Plasmodium membrane protein, unknown function
encoded by transcript variant 1; alternatively spliced
conserved Plasmodium protein, unknown function; transcript variant 1; alternatively spliced
encoded by transcript variant 2; alternatively spliced
conserved Plasmodium protein, unknown function; transcript variant 2; alternatively spliced
signal peptidase complex subunit 3, putative
ortholog of PRCDC_0902900; small fragment
transcript variant 1; alternatively spliced
transcript variant 2; alternatively spliced
beta subunit of coatomer complex, putative
vacuolar protein sorting-associated protein 46, putative
dynein light intermediate chain 2, cytosolic
ATP-dependent protease ATPase subunit ClpY, putative
translation initiation factor SUI1, putative
subunit of proteaseome activator complex, putative
apicoplast ribosomal protein L35 precursor, putative
gap found within coding sequence; ortholog of PRCDC_0906200
conserved Plasmodium membrane protein, unknown function; part of same gene as PRSY57_0906200A; gap found within coding sequence
conserved Plasmodium membrane protein, unknown function; part of same gene as PRSY57_0906200B; gap found within coding sequence
conserved Plasmodium membrane protein, unknown function; transcript variant 2; alternatively spliced
conserved Plasmodium membrane protein, unknown function; transcript variant 1; alternatively spliced
gap found within coding sequence; ortholog of PRCDC_0906600
conserved Plasmodium protein, unknown function; part of same gene as PRSY57_0906600A; gap found within coding sequence
conserved Plasmodium protein, unknown function; part of same gene as PRSY57_0906600B; gap found within coding sequence
ribosomal RNA methyltransferase, putative
gap found within coding sequence; ortholog of PRCDC_0906800
part of same gene as PRSY57_0906800A; gap found within coding sequence
part of same gene as PRSY57_0906800B; gap found within coding sequence
GDP-fucose protein O-fucosyltransferase 2, putative
subpellicular microtubule protein 1, putative
cytosolic Fe-S cluster assembly factor NBP35, putative
phosphatidylinositol N- acetylglucosaminyltransferase, putative
cysteine repeat modular protein 1, putative
hypothetical protein; ortholog of PRCDC_0909600; may be nonfunctional due to internal stop codon
putative inhibitor of cysteine proteases
tRNA (adenine(58)-N(1))-methyltransferase non- catalytic subunit TRM6, putative
26S proteasome regulatory subunit RPN8, putative
phospholipid or glycerol acyltransferase, putative
ubiquitin fusion degradation protein 1, putative
pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43, putative
cytochrome b5-like heme/steroid binding protein, putative
50S ribosomal protein L3, apicoplast, putative
eukaryotic translation initiation factor 3 subunit 5, putative
gap found within coding sequence; ortholog of PRCDC_0916400
conserved Plasmodium protein, unknown function; part of same gene as PRSY57_0916400B; gap found within coding sequence
conserved Plasmodium protein, unknown function; part of same gene as PRSY57_0916400A; gap found within coding sequence
similar to DNA sequence:PlasmoDB:PRCDC_0916500
dolichyl-diphosphooligosaccharide--protein glycosyltransferase, putative
pyridoxal 5'-phosphate dependent enzyme class III, putative
regulator of chromosome condensation, putative
long chain fatty acid elongation enzyme, putative
U4/U6 snRNA-associated-splicing factor, putative
tetratricopeptide repeat family protein, putative
nucleolar preribosomal assembly protein, putative
3-oxoacyl-[acyl-carrier-protein] reductase, putative
DNA-directed RNA polymerase II, putative
cyclin-dependent kinases regulatory subunit, putative
telomeric repeat binding factor 1, putative
alpha-tubulin N-acetyltransferase, putative
rRNA processing and telomere maintaining methyltransferase, putative
similar to DNA sequence:PlasmoDB:PRCDC_0923600
glutamine-dependent NAD(+) synthetase, putative
replication termination factor, putative
gap found within coding sequence; ortholog of PRCDC_0925500
part of same gene as PRSY57_0925500A; gap found within coding sequence
part of same gene as PRSY57_0925500B; gap found within coding sequence
serine/threonine protein phosphatase 4, putative
cytochrome c oxidase subunit 5B, putative
gap found within coding sequence; ortholog of PRCDC_0926000
cytochrome c oxidase subunit 6B, putative
part of same gene as PRSY57_0926000A.2, PRSY57_0926000B; transcript variant 1; alternatively spliced; gap found within coding sequence
part of same gene as PRSY57_0926000A.1, PRSY57_0926000B; transcript variant 2; alternatively spliced; gap found within coding sequence
part of same gene as PRSY57_0926000A.2, PRSY57_0926000A.1; gap found within coding sequence
serine/threonine protein kinase, putative
transcription initiation factor TFIID subunit 7, putative
gap found within coding sequence; ortholog of PRCDC_0927400
part of same gene as PRSY57_0927400B; gap found within coding sequence
part of same gene as PRSY57_0927400A; gap found within coding sequence
procollagen lysine 5-dioxygenase, putative
Contains in-frame UGA selenocysteine codon
proteasome subunit beta type-6, putative
adenylate kinase-like protein 2, putative
gap found within coding sequence; ortholog of PRCDC_0930100
part of same gene as PRSY57_0930100A; gap found within coding sequence
part of same gene as PRSY57_0930100B; gap found within coding sequence
gap found within coding sequence; ortholog of PRCDC_0930200
part of same gene as PRSY57_0930200B; gap found within coding sequence
part of same gene as PRSY57_0930200A; gap found within coding sequence
gap found within coding sequence; ortholog of PRCDC_0930500
part of same gene as PRSY57_0930500A; gap found within coding sequence
part of same gene as PRSY57_0930500B; gap found within coding sequence
apicoplast ribosomal protein S6, putative
gap found within coding sequence; ortholog of PRCDC_0931100
conserved Plasmodium protein, unknown function; part of same gene as PRSY57_0931100B; gap found within coding sequence
conserved Plasmodium protein, unknown function; part of same gene as PRSY57_0931100A; gap found within coding sequence
gamma-tubulin complex component, putative
mitochondrial-processing peptidase subunit beta, putative
transcription factor with AP2 domain(s), putative
vacuolar ATP synthase subunit e, putative
cAMP-dependent protein kinase catalytic subunit
U2 small nuclear ribonucleoprotein B'', putative
vacuolar protein sorting-associated protein 33, putative
phosphatidylinositol N- acetylglucosaminyltransferase subunit P, putative
gametocyte development protein 1, putative
Plasmodium exported protein, unknown function
putative exported protein; ortholog of PRCDC_0933700
cytoadherence linked asexual protein 9; ortholog of PRCDC_0933800
gap found within coding sequence; ortholog of PRCDC_0934000
part of same gene as PRSY57_0934000A; gap found within coding sequence
part of same gene as PRSY57_0934000B; gap found within coding sequence
putative exported protein; ortholog of PRCDC_0934600
exported protein (PHISTb); ortholog of PRCDC_0935000