Plasmodium reichenowi strain SY57 chromosome 8, whole genome shotgun sequence.
Eukaryota; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania).
Genomes of cryptic chimpanzee Plasmodium species reveal key evolutionary events leading to human malaria
Submitted (10-FEB-2017) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA
Submitted (07-MAR-2016) Department of Medicine, Perelman School of Medicine, University of Pennsylvania, 409 Johnson Pavilion, 3610 Hamilton Walk, Philadelphia, PA 19104, USA
PROVISIONAL REFSEQ: This record has not yet been subject to final\nNCBI review. The reference sequence is identical to CM003849.\nAssembly created using Velvet Columbus followed by PAGIT and\nGapFiller.\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Velvet v. 1.1.06; PAGIT v. 1; GapFiller v.\n 1.11\nGenome Coverage :: 200x\nSequencing Technology :: Illumina MiSeq\n##Genome-Assembly-Data-END##
conserved Plasmodium protein, unknown function
rRNA processing WD-repeat protein, putative
gap found within coding sequence; ortholog of PRCDC_0802200
part of same gene as PRSY57_0802200B, PRSY57_0802200C; gap found within coding sequence
part of same gene as PRSY57_0802200A, PRSY57_0802200C; gap found within coding sequence
part of same gene as PRSY57_0802200A, PRSY57_0802200B; gap found within coding sequence
gap found within coding sequence; ortholog of PRCDC_0802300
conserved Plasmodium protein, unknown function; part of same gene as PRSY57_0802300B; gap found within coding sequence
Short protein (PRSY57_0802300, KYN99132.1) was converted to a misc_feature.
serine/threonine protein phosphatase 2B catalytic subunit A, putative
mitogen-activated protein kinase organizer 1, putative
proteasome subunit beta type-4, putative
conserved Plasmodium membrane protein, unknown function
U2 snRNA/tRNA pseudouridine synthase, putative
serine/threonine protein kinase, FIKK family
glycosyltransferase family 28 protein, putative
vacuolar proton translocating ATPase subunit A, putative
gap found within coding sequence; ortholog of PRCDC_0806600
part of same gene as PRSY57_0806600B; gap found within coding sequence
part of same gene as PRSY57_0806600A; gap found within coding sequence
proteasome subunit alpha type-6, putative
26S proteasome regulatory subunit RPN10, putative
ortholog of PRCDC_0808600; annotated by similarity to unknown transcript annotated in PrCDC
unknown; annotated by similarity to unknown transcript annotated in PrCDC
histone acetyltransferase subunit NuA4, putative
encoded by transcript variant 1; alternatively spliced
conserved Plasmodium protein, unknown function; transcript variant 1; alternatively spliced
encoded by transcript variant 2; alternatively spliced
conserved Plasmodium protein, unknown function; transcript variant 2; alternatively spliced
conserved protein, unknown function; ortholog of PRCDC_0810500; may be nonfunctional due to frameshift
coactivator-associated arginine methyltransferase 1
gap found within coding sequence; ortholog of PRCDC_0811200
part of same gene as PRSY57_0811200B; gap found within coding sequence
part of same gene as PRSY57_0811200A; gap found within coding sequence
RNA-binding protein (U1 snRNP-like), putative
translation initiation factor SUI1, putative
DNA/RNA-binding protein Alba 1, putative
Contains in-frame UGA selenocysteine codon
eukaryotic translation initiation factor, putative
vacuolar protein sorting-associated protein 9, putative
nucleolar preribosomal assembly protein, putative
vacuolar protein sorting-associated protein 2, putative
gap found within coding sequence; ortholog of PRCDC_0815600
conserved Plasmodium protein, unknown function; part of same gene as PRSY57_0815600A; gap found within coding sequence
conserved Plasmodium protein, unknown function; part of same gene as PRSY57_0815600B; gap found within coding sequence
small heat shock protein HSP20, putative
trafficking protein particle complex subunit 2- like protein, putative
gap found within coding sequence; ortholog of PRCDC_0816100
meiotic recombination protein DMC1, putative
part of same gene as PRSY57_0816100A; gap found within coding sequence
part of same gene as PRSY57_0816100B; gap found within coding sequence
gap found within coding sequence; ortholog of PRCDC_0816800
protein kinase c inhibitor-like protein, putative
part of same gene as PRSY57_0816800B; gap found within coding sequence
part of same gene as PRSY57_0816800A; gap found within coding sequence
gap found within coding sequence; ortholog of PRCDC_0817900
conserved Plasmodium protein, unknown function; part of same gene as PRSY57_0817900A; gap found within coding sequence
conserved Plasmodium protein, unknown function; part of same gene as PRSY57_0817900B; gap found within coding sequence
U3 small nucleolar ribonucleoprotein, putative
gap found within coding sequence; ortholog of PRCDC_0819100
conserved Plasmodium protein, unknown function; part of same gene as PRSY57_0819100A; gap found within coding sequence
conserved Plasmodium protein, unknown function; part of same gene as PRSY57_0819100B; gap found within coding sequence
U6 snRNA-associated Sm-like protein LSm3, putative
2-oxoglutarate dehydrogenase E1 component
gap found within coding sequence; ortholog of PRCDC_0820600
ATP-dependent RNA helicase prh1, putative
part of same gene as PRSY57_0820600A; gap found within coding sequence
part of same gene as PRSY57_0820600B; gap found within coding sequence
ribosomal RNA small subunit methyltransferase NEP1, putative
protein transport protein SEC61 subunit beta, putative
mitochondrial ribosomal protein L4 precursor, putative
mediator of RNA polymerase II transcription subunit 7, putative
small nuclear ribonucleoprotein G, putative
gap found within coding sequence; ortholog of PRCDC_0821700
conserved Plasmodium protein, unknown function; part of same gene as PRSY57_0821700B; gap found within coding sequence
Short protein (PRSY57_0821700, KYN99314.1) was converted to a misc_feature.
membrane skeletal protein IMC1-like protein
dicarboxylate/tricarboxylate carrier, putative
translation initiation factor IF-3, putative
cytochrome c oxidase assembly protein, putative
dehydrodolichyl diphosphate synthetase, putative
ubiquitin conjugation factor E4 B, putative
ATP-dependent RNA helicase DBP10, putative
translation initiation factor IF-2, putative
hypothetical protein; ortholog of PRCDC_0826600; may be nonfunctional due to frameshift
apicoplast ribosomal protein L21 precursor, putative
mitochondrial inner membrane protein OXA1, putative
translation initiation factor EIF-2b alpha subunit, putative
U6 snRNA-associated Sm-like protein LSm8, putative
prolyl 4-hydroxylase subunit alpha, putative
exported protein (PHISTa); ortholog of PRCDC_0831000
gap found within coding sequence; ortholog of PRCDC_0831100
part of same gene as PRSY57_0831100A; gap found within coding sequence
part of same gene as PRSY57_0831100B; gap found within coding sequence