Plasmodium reichenowi strain SY57 chromosome 6, whole genome shotgun sequence.
Eukaryota; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania).
Genomes of cryptic chimpanzee Plasmodium species reveal key evolutionary events leading to human malaria
Submitted (10-FEB-2017) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA
Submitted (07-MAR-2016) Department of Medicine, Perelman School of Medicine, University of Pennsylvania, 409 Johnson Pavilion, 3610 Hamilton Walk, Philadelphia, PA 19104, USA
PROVISIONAL REFSEQ: This record has not yet been subject to final\nNCBI review. The reference sequence is identical to CM003847.\nAssembly created using Velvet Columbus followed by PAGIT and\nGapFiller.\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Velvet v. 1.1.06; PAGIT v. 1; GapFiller v.\n 1.11\nGenome Coverage :: 200x\nSequencing Technology :: Illumina MiSeq\n##Genome-Assembly-Data-END##
Plasmodium exported protein, unknown function
exported protein (PHISTa); ortholog of PRCDC_0600300
conserved Plasmodium protein, unknown function
liver merozoite formation protein, putative
dihydroorotate dehydrogenase, mitochondrial precursor
trophozoite exported protein 1, putative
mitochondrial ribosomal protein L41, putative
cyclin dependent kinase binding protein, putative
gap found within coding sequence; ortholog of PRCDC_0604500
long chain polyunsaturated fatty acid elongation enzyme, putative
part of same gene as PRSY57_0604500B; gap found within coding sequence
part of same gene as PRSY57_0604500A; gap found within coding sequence
ubiquitin-conjugating enzyme E2, putative
polypyrimidine tract binding protein, putative
gap found within coding sequence; ortholog of PRCDC_0605300
part of same gene as PRSY57_0605300B; gap found within coding sequence
part of same gene as PRSY57_0605300A; gap found within coding sequence
translation initiation factor IF-2, putative
gap found within coding sequence; ortholog of PRCDC_0605700; possible contamination with P. gaboni reads
Possible contamination with P. gaboni reads; part of same gene as PRSY57_0605700B; gap found within coding sequence
Possible contamination with P. gaboni reads; part of same gene as PRSY57_0605700A; gap found within coding sequence
uroporphyrinogen III decarboxylase, putative
G-protein associated signal transduction protein, putative
para-hydroxybenzoate--polyprenyltransferase (4- hydroxybenzoate octaprenyltransferase), putative
spindle assembly abnormal protein 6, putative
gap found within coding sequence; ortholog of PRCDC_0606600
part of same gene as PRSY57_0606600A; gap found within coding sequence
part of same gene as PRSY57_0606600B; gap found within coding sequence
sorting assembly machinery 50 kDa subunit, putative
proteasome subunit alpha type-2, putative
mitochondrial cardiolipin synthase, putative
gap found within coding sequence; ortholog of PRCDC_0608200
conserved Plasmodium protein, unknown function; part of same gene as PRSY57_0608200B; gap found within coding sequence
conserved Plasmodium protein, unknown function; part of same gene as PRSY57_0608200A; gap found within coding sequence
mitochondrial ribosomal protein L19 precursor, putative
ortholog of PRCDC_0609000; annotated by similarity to unknown transcript annotated in PrCDC
unknown; annotated by similarity to unknown transcript annotated in PrCDC
gap found within coding sequence; ortholog of PRCDC_0609300
part of same gene as PRSY57_0609300B; gap found within coding sequence
part of same gene as PRSY57_0609300A; gap found within coding sequence
transcription elongation factor SPT5, putative
SNARE associated Golgi protein, putative
succinate dehydrogenase subunit 3, putative
transcription factor with AP2 domain(s), putative
gap found within coding sequence; ortholog of PRCDC_0610000
conserved Plasmodium protein, unknown function; part of same gene as PRSY57_0610000B; gap found within coding sequence
conserved Plasmodium protein, unknown function; part of same gene as PRSY57_0610000A; gap found within coding sequence
SWI/SNF-related matrix-associated actin- dependent regulator of chromatin
eukaryotic translation initiation factor 3 subunit L, putative
nucleolar GTP-binding protein 1, putative
encoded by transcript variant 1; alternatively spliced
encoded by transcript variant 2; alternatively spliced
conserved Plasmodium protein, unknown function; transcript variant 1; alternatively spliced
conserved Plasmodium protein, unknown function; transcript variant 2; alternatively spliced
encoded by transcript variant 3; alternatively spliced
conserved Plasmodium protein, unknown function; transcript variant 3; alternatively spliced
apicoplast ribosomal protein L18 precursor, putative
thiamin-phosphate pyrophosphorylase, putative
cytosolic Fe-S cluster assembly factor NAR1, putative
conserved Plasmodium membrane protein, unknown function
GPI-anchored wall transfer protein 1, putative
gap found within coding sequence; ortholog of PRCDC_0614100
part of same gene as PRSY57_0614100A; gap found within coding sequence
part of same gene as PRSY57_0614100B; gap found within coding sequence
RNA and export factor binding protein, putative
mitochondrial import receptor subunit TOM40, putative
erythrocyte membrane protein 1; ortholog of PRCDC_0616100; exon 2
trafficking protein particle complex subunit 6A, putative
transcript variant 1; alternatively spliced
transcript variant 2; alternatively spliced
gap found within coding sequence; ortholog of PRCDC_0617400
conserved Plasmodium protein, unknown function; part of same gene as PRSY57_0617400A.1, PRSY57_0617400A.2; gap found within coding sequence
conserved Plasmodium protein, unknown function; part of same gene as PRSY57_0617400B, PRSY57_0617400A.2; transcript variant 1; alternatively spliced; gap found within coding sequence
conserved Plasmodium protein, unknown function; part of same gene as PRSY57_0617400B, PRSY57_0617400A.1; transcript variant 2; alternatively spliced; gap found within coding sequence
cell division cycle protein 48-like protein
cleavage stimulation factor subunit 1, putative
mRNA binding PUM-HD domain protein-like protein
mRNA binding Pumilio-homology domain protein, putative
signal recognition particle subunit SRP68, putative
vacuolar transporter chaperone, putative
conserved Apicomplexan protein, unknown function
gap found within coding sequence; ortholog of PRCDC_0621700
part of same gene as PRSY57_0621700A; gap found within coding sequence
part of same gene as PRSY57_0621700B; gap found within coding sequence
transcription or splicing factor-like protein, putative
ATP dependent DEAD-box helicase, putative
gap found within coding sequence; ortholog of PRCDC_0622600
conserved Plasmodium protein, unknown function; part of same gene as PRSY57_0622600A; gap found within coding sequence
conserved Plasmodium protein, unknown function; part of same gene as PRSY57_0622600B; gap found within coding sequence
anaphase promoting complex subunit, putative
N-acetylglucosaminylphosphatidylinositol deacetylase, putative
oxidoreductase, short-chain dehydrogenase family, putative
3-oxoacyl-acyl-carrier protein synthase I/II
similar to DNA sequence:PlasmoDB:PRCDC_0625210
mitochondrial ribosomal protein L46 precursor, putative
E3 ubiquitin-protein ligase RNF5, putative
mitochondrial import inner membrane translocase subunit TIM22, putative
ribonuclease P protein subunit p29, putative
HECT-domain (ubiquitin-transferase), putative
eukaryotic translation initiation factor 2-alpha kinase, putative
choline/ethanolaminephosphotransferase, putative
glutamyl-tRNA(Gln) amidotransferase subunit B, putative
nicotinate phosphoribosyltransferase, putative
phosphatidylcholine-sterol acyltransferase, putative
sec14-like cytosolic factor or phosphatidylinositol/phosphatidylcholine transfer protein, putative
DNA polymerase epsilon, catalytic subunit a, putative
microtubule-associated protein ytm1-like protein
bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase, putative
ATP-dependent RNA helicase HAS1, putative
tetratricopeptide repeat protein, putative