Plasmodium reichenowi strain SY57 chromosome 5, whole genome shotgun sequence.
Eukaryota; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania).
Genomes of cryptic chimpanzee Plasmodium species reveal key evolutionary events leading to human malaria
Submitted (10-FEB-2017) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA
Submitted (07-MAR-2016) Department of Medicine, Perelman School of Medicine, University of Pennsylvania, 409 Johnson Pavilion, 3610 Hamilton Walk, Philadelphia, PA 19104, USA
PROVISIONAL REFSEQ: This record has not yet been subject to final\nNCBI review. The reference sequence is identical to CM003846.\nAssembly created using Velvet Columbus followed by PAGIT and\nGapFiller.\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Velvet v. 1.1.06; PAGIT v. 1; GapFiller v.\n 1.11\nGenome Coverage :: 200x\nSequencing Technology :: Illumina MiSeq\n##Genome-Assembly-Data-END##
anaphase promoting complex subunit, putative
vacuolar protein sorting-associated protein 11, putative
conserved Plasmodium membrane protein, unknown function
conserved Plasmodium protein, unknown function
mitochondrial inner membrane TIM10 associated protein, putative
50S ribosomal protein L28, apicoplast, putative
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, putative
2-oxoisovalerate dehydrogenase subunit beta, mitochondrial, putative
gap found within coding sequence; ortholog of PRCDC_0503900
conserved Plasmodium protein, unknown function; part of same gene as PRSY57_0503900B; gap found within coding sequence
conserved Plasmodium protein, unknown function; part of same gene as PRSY57_0503900A; gap found within coding sequence
trafficking protein particle complex subunit 8, putative
DNA mismatch repair protein MSH6, putative
small ubiquitin-related modifier, putative
gap found within coding sequence; ortholog of PRCDC_0505300
60S ribosomal subunit protein L24-2, putative
part of same gene as PRSY57_0505300A; gap found within coding sequence
part of same gene as PRSY57_0505300B; gap found within coding sequence
histone deacetylase, putative; ortholog of PRCDC_0505800
cell differentiation protein rcd1, putative
nuclear protein localization protein 4, putative
gap found within coding sequence; ortholog of PRCDC_0507300
part of same gene as PRSY57_0507300B; gap found within coding sequence
part of same gene as PRSY57_0507300A; gap found within coding sequence
longevity-assurance (LAG1) protein, putative
chromosome condensation protein, putative
hypothetical protein; ortholog of PRCDC_0508900; may be nonfunctional due to frameshift
stripes inner membrane complex protein, putative
translationally-controlled tumor protein-like protein
kinase binding protein CGI-121, putative
CDK-activating kinase assembly factor, putative
hypothetical protein; ortholog of PRCDC_0511650
purine nucleoside phosphorylase, putative
mitochondrial import inner membrane translocase subunit TIM16, putative
deoxyribodipyrimidine photo-lyase, putative
ATP-dependent DNA helicase UvrD, putative
gap found within coding sequence; ortholog of PRCDC_0514500
conserved Plasmodium protein, unknown function; part of same gene as PRSY57_0514500B; gap found within coding sequence
conserved Plasmodium protein, unknown function; part of same gene as PRSY57_0514500A; gap found within coding sequence
SWIB/MDM2 domain-containing protein, putative
proteasome subunit beta type-1, putative
ATP-dependent RNA helicase DDX23, putative
mitochondrial ribosomal protein L14 precursor, putative
cytochrome c oxidase assembly protein (heme A: farnesyltransferase), putative
carbon catabolite repressor protein 4, putative
U6 snRNA-associated Sm-like protein LSm2, putative
phosphomethylpyrimidine kinase, putative
bis(5'-nucleosyl)-tetraphosphatase, putative
ribosomal large subunit pseudouridylate synthase, putative
DEAD/DEAH box ATP-dependent RNA helicase, putative
transcription initiation factor TFIID subunit 10, putative
S-adenosylmethionine-dependent methyltransferase, putative
50S ribosomal protein L17, apicoplast, putative
inner membrane complex protein, putative
mitochondrial processing peptidase alpha subunit, putative
cytosolic preribosomal GTP-binding protein, putative
50S ribosomal protein L12, apicoplast, putative
mitochondrial import receptor subunit TOM22, putative
ubiquitin fusion degradation protein UFD1, putative
inner membrane complex protein 1g, putative
gap found within coding sequence; ortholog of PRCDC_0525000
part of same gene as PRSY57_0525000B; gap found within coding sequence
part of same gene as PRSY57_0525000A; gap found within coding sequence
ADP-ribosylation factor GTPase-activating protein, putative
encoded by transcript variant 1; alternatively spliced
transcript variant 1; alternatively spliced
encoded by transcript variant 2; alternatively spliced
transcript variant 2; alternatively spliced
nucleolar Jumonji domain interacting protein, putative
transmembrane emp24 domain-containing protein, putative
DNA replication licensing factor MCM3, putative
ubiquitin-conjugating enzyme E2 N, putative
ubiquitin carboxyl-terminal hydrolase, putative
gap found within coding sequence; ortholog of PRCDC_0528300
part of same gene as PRSY57_0528300B; gap found within coding sequence
part of same gene as PRSY57_0528300A; gap found within coding sequence
conserved Plasmodium protein, unknown function; transcript variant 1; alternatively spliced
conserved Plasmodium protein, unknown function; transcript variant 2; alternatively spliced
gap found within coding sequence; ortholog of PRCDC_0528600
part of same gene as PRSY57_0528600B; gap found within coding sequence
part of same gene as PRSY57_0528600A; gap found within coding sequence
phosphoenolpyruvate/phosphate translocator, putative
gap found within coding sequence; ortholog of PRCDC_0529400
conserved Plasmodium membrane protein, unknown function; part of same gene as PRSY57_0529400B; gap found within coding sequence
conserved Plasmodium membrane protein, unknown function; part of same gene as PRSY57_0529400A; gap found within coding sequence
mitochondrial ribosomal protein S16 precursor, putative
ortholog of PRCDC_0530600; annotated by similarity to unknown transcript annotated in PrCDC
unknown; annotated by similarity to unknown transcript annotated in PrCDC
lysine-rich membrane-associated PHISTb protein, putative
Plasmodium exported protein, unknown function