Plasmodium reichenowi strain SY57 chromosome 4, whole genome shotgun sequence.
Eukaryota; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania).
Genomes of cryptic chimpanzee Plasmodium species reveal key evolutionary events leading to human malaria
Submitted (10-FEB-2017) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA
Submitted (07-MAR-2016) Department of Medicine, Perelman School of Medicine, University of Pennsylvania, 409 Johnson Pavilion, 3610 Hamilton Walk, Philadelphia, PA 19104, USA
PROVISIONAL REFSEQ: This record has not yet been subject to final\nNCBI review. The reference sequence is identical to CM003845.\nAssembly created using Velvet Columbus followed by PAGIT and\nGapFiller.\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Velvet v. 1.1.06; PAGIT v. 1; GapFiller v.\n 1.11\nGenome Coverage :: 200x\nSequencing Technology :: Illumina MiSeq\n##Genome-Assembly-Data-END##
Plasmodium exported protein, unknown function
gap found within coding sequence; ortholog of PRCDC_0004900
part of same gene as PRSY57_0004900A; gap found within coding sequence
part of same gene as PRSY57_0004900B; gap found within coding sequence
reticulocyte binding protein 1; interrupted by gap; ortholog of PRCDC_0005400
conserved Plasmodium protein, unknown function
transcription factor with AP2 domain(s), putative
gap found within coding sequence; ortholog of PRCDC_0401900
conserved Plasmodium protein, unknown function; part of same gene as PRSY57_0401900A; gap found within coding sequence
conserved Plasmodium protein, unknown function; part of same gene as PRSY57_0401900B; gap found within coding sequence
conserved Plasmodium membrane protein, unknown function
protein transport protein Sec24B, putative
ag-1 blood stage membrane protein-like protein
pre-mRNA-processing-splicing factor 8, putative
gap found within coding sequence; ortholog of PRCDC_0404100
conserved Plasmodium protein, unknown function; part of same gene as PRSY57_0404100B; gap found within coding sequence
conserved Plasmodium protein, unknown function; part of same gene as PRSY57_0404100A; gap found within coding sequence
gap found within coding sequence; ortholog of PRCDC_0404200
conserved Plasmodium protein, unknown function; part of same gene as PRSY57_0404200A; gap found within coding sequence
conserved Plasmodium protein, unknown function; part of same gene as PRSY57_0404200B; gap found within coding sequence
zinc finger, RAN binding protein, putative
sporozoite invasion-associated protein 1, putative
U4/U6 small nuclear ribonucleoprotein PRP31, putative
40S ribosomal processing protein, putative
peptide chain release factor 2, putative
gap found within coding sequence; ortholog of PRCDC_0407300
part of same gene as PRSY57_0407300A; gap found within coding sequence
part of same gene as PRSY57_0407300B; gap found within coding sequence
gap found within coding sequence; ortholog of PRCDC_0407400
conserved Plasmodium protein, unknown function; part of same gene as PRSY57_0407400A; gap found within coding sequence
conserved Plasmodium protein, unknown function; part of same gene as PRSY57_0407400B; gap found within coding sequence
exosome complex component RRP4, putative
similar to DNA sequence:PlasmoDB:PRCDC_0408500
DEAD box ATP-dependent RNA helicase, putative
mitochondrial ribosomal protein S12 precursor, putative
phosphopantothenoylcysteine synthetase, putative
gap found within coding sequence; ortholog of PRCDC_0411500
part of same gene as PRSY57_0411500A; gap found within coding sequence
part of same gene as PRSY57_0411500B; gap found within coding sequence
encoded by transcript variant 1; alternatively spliced
encoded by transcript variant 2; alternatively spliced
transcript variant 1; alternatively spliced
transcript variant 2; alternatively spliced
armadillo-domain containing rhoptry protein, putative
glutamyl-tRNA(Gln) amidotransferase subunit A, putative
repressor of RNA polymerase III transcription MAF1, putative
CDGSH iron-sulfur domain-containing protein, putative
bifunctional dihydrofolate reductase-thymidylate synthase
golgi organization and biogenesis factor, putative
trafficking protein particle complex subunit 3, putative
regulator of chromosome condensation, putative
gap found within coding sequence; ortholog of PRCDC_0416400
conserved Plasmodium protein, unknown function; part of same gene as PRSY57_0416400B; gap found within coding sequence
Short protein (PRSY57_0416400, KYO02155.1) was converted to a misc_feature.
60S ribosomal protein L7ae/L30e, putative
serine/threonine protein kinase RIO2, putative
holo-(acyl-carrier protein) synthase, putative
erythrocyte membrane protein 1; ortholog of PRCDC_0418800; exon 2
transmembrane emp24 domain-containing protein, putative
gap found within coding sequence; ortholog of PRCDC_0419500
part of same gene as PRSY57_0419500B; gap found within coding sequence
part of same gene as PRSY57_0419500A; gap found within coding sequence
pre-mRNA-splicing helicase BRR2, putative
gap found within coding sequence; ortholog of PRCDC_0420000
part of same gene as PRSY57_0420000B; gap found within coding sequence
part of same gene as PRSY57_0420000A; gap found within coding sequence
gap found within coding sequence; ortholog of PRCDC_0420500
conserved Plasmodium protein, unknown function; part of same gene as PRSY57_0420500A; gap found within coding sequence
conserved Plasmodium protein, unknown function; part of same gene as PRSY57_0420500B; gap found within coding sequence
glideosome associated protein with multiple membrane spans 2
cysteine-rich protective antigen, putative
surface-associated interspersed protein 4.2 (SURFIN 4.2)
serine/threonine protein kinase, FIKK family
exported protein (PHISTb); ortholog of PRCDC_0422000