Plasmodium reichenowi strain SY57 chromosome 3, whole genome shotgun sequence.
Eukaryota; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania).
Genomes of cryptic chimpanzee Plasmodium species reveal key evolutionary events leading to human malaria
Submitted (10-FEB-2017) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA
Submitted (07-MAR-2016) Department of Medicine, Perelman School of Medicine, University of Pennsylvania, 409 Johnson Pavilion, 3610 Hamilton Walk, Philadelphia, PA 19104, USA
PROVISIONAL REFSEQ: This record has not yet been subject to final\nNCBI review. The reference sequence is identical to CM003844.\nAssembly created using Velvet Columbus followed by PAGIT and\nGapFiller.\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Velvet v. 1.1.06; PAGIT v. 1; GapFiller v.\n 1.11\nGenome Coverage :: 200x\nSequencing Technology :: Illumina MiSeq\n##Genome-Assembly-Data-END##
serine/threonine protein kinase, FIKK family
Plasmodium exported protein, unknown function
conserved Plasmodium protein, unknown function
gap found within coding sequence; ortholog of PRCDC_0301100
golgi organization and biogenesis factor, putative
part of same gene as PRSY57_0301100A; gap found within coding sequence
part of same gene as PRSY57_0301100B; gap found within coding sequence
cytoadherence linked asexual protein 3.2
ortholog of PRCDC_0301700; annotated by similarity to unknown transcript annotated in PrCDC
unknown; annotated by similarity to unknown transcript annotated in PrCDC
cytoadherence linked asexual protein 3.1
CDGSH iron-sulfur domain-containing protein, putative
N-ethylmaleimide-sensitive fusion protein, putative
DNA-directed RNA polymerase subunit I, putative
lipoamide acyltransferase component of branched- chain alpha-keto acid dehydrogenase complex, putative
phosphatidylethanolamine-binding protein, putative
inner membrane complex protein 1a, putative
inner membrane complex protein 1e, putative
conserved Plasmodium membrane protein, unknown function
ubiquitin-conjugating enzyme E2, putative
P-loop containing nucleoside triphosphate hydrolase, putative
FAD-dependent glycerol-3-phosphate dehydrogenase, putative
membrane magnesium transporter, putative
T-complex protein beta subunit, putative
similar to DNA sequence:PlasmoDB:PRCDC_0306300
ATP-dependent Clp protease proteolytic subunit
DNA polymerase epsilon subunit b, putative
similar to DNA sequence:PlasmoDB:PRCDC_0307700
dual specificity protein phosphatase, putative
serine/threonine protein kinase, putative
similar to DNA sequence:PlasmoDB:PRCDC_0308700
60S acidic ribosomal protein P2, putative
parasite-infected erythrocyte surface protein
SAC3/GNAP family-related protein, putative
encoded by transcript variant 2; alternatively spliced
encoded by transcript variant 1; alternatively spliced
transcript variant 2; alternatively spliced
transcript variant 1; alternatively spliced
trafficking protein particle complex subunit 4, putative
phosphatidylinositol 3- and 4-kinase, putative
26S proteasome regulatory subunit RPN12, putative
gap found within coding sequence; ortholog of PRCDC_0312400
part of same gene as PRSY57_0312400B; gap found within coding sequence
part of same gene as PRSY57_0312400A; gap found within coding sequence
apicoplast conserved ycf19 protein precursor, unknown function
gap found within coding sequence; ortholog of PRCDC_0313000
conserved Plasmodium protein, unknown function; part of same gene as PRSY57_0313000B.2, PRSY57_0313000A; transcript variant 1; alternatively spliced; gap found within coding sequence
Short protein (PRSY57_0313000, KYO02626.1) was converted to a misc_feature.
conserved Plasmodium protein, unknown function; part of same gene as PRSY57_0313000B.1, PRSY57_0313000B.2; gap found within coding sequence
gap found within coding sequence; ortholog of PRCDC_0313100
conserved Plasmodium protein, unknown function; part of same gene as PRSY57_0313100B; gap found within coding sequence
conserved Plasmodium protein, unknown function; part of same gene as PRSY57_0313100A; gap found within coding sequence
gap found within coding sequence; ortholog of PRCDC_0313400
vesicle transport v-SNARE protein, putative
part of same gene as PRSY57_0313400A; transcript variant 1; alternatively spliced; gap found within coding sequence
part of same gene as PRSY57_0313400B; gap found within coding sequence
serine/threonine protein phosphatase 6, putative
circumsporozoite- and TRAP-related protein
mitochondrial ribosomal protein L29/L47 precursor, putative
mitochondrial ribosomal protein L27 precursor, putative
proteasome subunit alpha type-3, putative
CPSF (cleavage and polyadenylation specific factor), subunit A, putative
DNA-directed RNA polymerase II subunit RPB1, putative
gap found within coding sequence; ortholog of PRCDC_0317700
conserved Plasmodium protein, unknown function; part of same gene as PRSY57_0317700A; gap found within coding sequence
conserved Plasmodium protein, unknown function; part of same gene as PRSY57_0317700B; gap found within coding sequence
cleavage and polyadenylation specificity factor, putative
E3 ubiquitin-protein ligase RBX1, putative
endonuclease/exonuclease/phosphatase family protein, putative
protein phosphatase inhibitor 2, putative
T-complex protein 1 epsilon subunit, putative
signal peptidase complex subunit 2, putative
ATP-dependent RNA helicase DDX6, putative
N-acetylglucosamine-1-phosphate transferase, putative
microtubule and actin binding protein, putative
cyclic amine resistance locus protein, putative
diacylglycerol O-acyltransferase, putative
translation machinery-associated protein 7, putative
survival motor neuron-like protein, putative
U4/U6.U5 tri-snRNP-associated protein 1, putative