Plasmodium reichenowi strain SY57 chromosome 2, whole genome shotgun sequence.
Eukaryota; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania).
Genomes of cryptic chimpanzee Plasmodium species reveal key evolutionary events leading to human malaria
Submitted (10-FEB-2017) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA
Submitted (07-MAR-2016) Department of Medicine, Perelman School of Medicine, University of Pennsylvania, 409 Johnson Pavilion, 3610 Hamilton Walk, Philadelphia, PA 19104, USA
PROVISIONAL REFSEQ: This record has not yet been subject to final\nNCBI review. The reference sequence is identical to CM003843.\nAssembly created using Velvet Columbus followed by PAGIT and\nGapFiller.\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Velvet v. 1.1.06; PAGIT v. 1; GapFiller v.\n 1.11\nGenome Coverage :: 200x\nSequencing Technology :: Illumina MiSeq\n##Genome-Assembly-Data-END##
gap found within coding sequence; ortholog of PRCDC_0201500
conserved Plasmodium protein, unknown function; part of same gene as PRSY57_0201500B; gap found within coding sequence
conserved Plasmodium protein, unknown function; part of same gene as PRSY57_0201500A; gap found within coding sequence
encoded by transcript variant 2; alternatively spliced
encoded by transcript variant 1; alternatively spliced
conserved Plasmodium protein, unknown function; transcript variant 2; alternatively spliced
conserved Plasmodium protein, unknown function; transcript variant 1; alternatively spliced
octaprenyl pyrophosphate synthase, putative
conserved Plasmodium protein, unknown function
gap found within coding sequence; ortholog of PRCDC_0202100
conserved Plasmodium protein, unknown function; part of same gene as PRSY57_0202100A; gap found within coding sequence
conserved Plasmodium protein, unknown function; part of same gene as PRSY57_0202100B; gap found within coding sequence
ERCC1 nucleotide excision repair protein, putative
nucleolar preribosomal assembly protein, putative
gap found within coding sequence; ortholog of PRCDC_0202900
conserved Plasmodium protein, unknown function; part of same gene as PRSY57_0202900A; gap found within coding sequence
conserved Plasmodium protein, unknown function; part of same gene as PRSY57_0202900B; gap found within coding sequence
5'-3' exonuclease, N-terminal resolvase-like domain, putative
DNA-directed RNA polymerase II 16 kDa subunit, putative
26S proteasome regulatory subunit RPN1, putative
cysteine desulfuration protein SufE, putative
pentafunctional AROM polypeptide, putative
transcript variant 2; alternatively spliced
transcript variant 1; alternatively spliced
KRR1 small subunit processome component, putative
transmission-blocking target antigen s230
gap found within coding sequence; ortholog of PRCDC_0208100
part of same gene as PRSY57_0208100A; gap found within coding sequence
part of same gene as PRSY57_0208100B; gap found within coding sequence
2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
gap found within coding sequence; ortholog of PRCDC_0208500
part of same gene as PRSY57_0208500A; gap found within coding sequence
part of same gene as PRSY57_0208500B; gap found within coding sequence
gap found within coding sequence; ortholog of PRCDC_0208600
part of same gene as PRSY57_0208600A; gap found within coding sequence
part of same gene as PRSY57_0208600B; gap found within coding sequence
ortholog of PRCDC_0208800; annotated by similarity to unknown transcript annotated in PrCDC
unknown; annotated by similarity to unknown transcript annotated in PrCDC
secretory complex protein 61 gamma subunit
gap found within coding sequence; ortholog of PRCDC_0210000
Short protein (PRSY57_0210000, KYO03030.1) was converted to a misc_feature.
conserved Plasmodium protein, unknown function; part of same gene as PRSY57_0210000A; gap found within coding sequence
gap found within coding sequence; ortholog of PRCDC_0210400
part of same gene as PRSY57_0210400B; gap found within coding sequence
part of same gene as PRSY57_0210400A; gap found within coding sequence
dolichol-linked oligosaccharide biosynthesis enzyme, putative
mitochondrial ribosomal protein L12 precursor, putative
peptide chain release factor subunit 1, putative
conserved Plasmodium membrane protein, unknown function
secreted protein with altered thrombospondin repeat domain, putative
Leu/Phe-tRNA protein transferase, putative
gap found within coding sequence; ortholog of PRCDC_0212300
part of same gene as PRSY57_0212300B, PRSY57_0212300C; gap found within coding sequence
part of same gene as PRSY57_0212300A, PRSY57_0212300C; gap found within coding sequence
part of same gene as PRSY57_0212300A, PRSY57_0212300B; gap found within coding sequence
gap found within coding sequence; ortholog of PRCDC_0212400
conserved Plasmodium protein, unknown function; part of same gene as PRSY57_0212400A; gap found within coding sequence
Short protein (PRSY57_0212400, KYO03059.1) was converted to a misc_feature.
gap found within coding sequence; ortholog of PRCDC_0212500
conserved Plasmodium protein, unknown function; part of same gene as PRSY57_0212500A; gap found within coding sequence
conserved Plasmodium protein, unknown function; part of same gene as PRSY57_0212500B; gap found within coding sequence
mitochondrial ribosomal protein L13 precursor, putative
serine/threonine protein kinase, putative
gap found within coding sequence; ortholog of PRCDC_0213800
part of same gene as PRSY57_0213800B; gap found within coding sequence
part of same gene as PRSY57_0213800A; gap found within coding sequence
DNA-directed RNA polymerase II second largest subunit, putative
origin recognition complex subunit 5, putative
gap found within coding sequence; ortholog of PRCDC_0214800
part of same gene as PRSY57_0214800A; gap found within coding sequence
part of same gene as PRSY57_0214800B; gap found within coding sequence
vacuolar protein sorting-associated protein 45, putative
gap found within coding sequence; ortholog of PRCDC_0215600
conserved Plasmodium protein, unknown function; part of same gene as PRSY57_0215600B; gap found within coding sequence
conserved Plasmodium protein, unknown function; part of same gene as PRSY57_0215600A; gap found within coding sequence
gap found within coding sequence; ortholog of PRCDC_0215700
conserved Plasmodium membrane protein, unknown function; part of same gene as PRSY57_0215700A; gap found within coding sequence
conserved Plasmodium membrane protein, unknown function; part of same gene as PRSY57_0215700B; gap found within coding sequence
gap found within coding sequence; ortholog of PRCDC_0215800
conserved Plasmodium protein, unknown function; part of same gene as PRSY57_0215800B; gap found within coding sequence
conserved Plasmodium protein, unknown function; part of same gene as PRSY57_0215800A; gap found within coding sequence
ATP synthase F1, alpha subunit, putative
ortholog of PRCDC_0216700; Putative cytosolic small ribosomal subunit, based on 1) co-expression analyses between Plasmodium falciparum erythrocytic stage and Saccharomyces cervisiae cell cycle and 2) similarity with YGL189C and YER131W(PMID:20078859).
replication factor C subunit 2, putative
apicoplast RNA methyltransferase precursor, putative
DEAD/DEAH box ATP-dependent RNA helicase, putative
small nuclear ribonucleoprotein Sm D2, putative
pre-mRNA-processing protein 45, putative
ribosome associated membrane protein RAMP4, putative
replication factor C subunit 1, putative
Plasmodium exported protein, unknown function