Plasmodium reichenowi strain SY57 chromosome 1, whole genome shotgun sequence.
Eukaryota; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania).
Genomes of cryptic chimpanzee Plasmodium species reveal key evolutionary events leading to human malaria
Submitted (10-FEB-2017) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA
Submitted (07-MAR-2016) Department of Medicine, Perelman School of Medicine, University of Pennsylvania, 409 Johnson Pavilion, 3610 Hamilton Walk, Philadelphia, PA 19104, USA
PROVISIONAL REFSEQ: This record has not yet been subject to final\nNCBI review. The reference sequence is identical to CM003842.\nAssembly created using Velvet Columbus followed by PAGIT and\nGapFiller.\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Velvet v. 1.1.06; PAGIT v. 1; GapFiller v.\n 1.11\nGenome Coverage :: 200x\nSequencing Technology :: Illumina MiSeq\n##Genome-Assembly-Data-END##
gap found within coding sequence; ortholog of PRCDC_0100500
serine/threonine protein kinase, FIKK family
part of same gene as PRSY57_0100500A; gap found within coding sequence
part of same gene as PRSY57_0100500B; gap found within coding sequence
merozoite-associated tryptophan-rich antigen, putative
conserved Plasmodium protein, unknown function
gap found within coding sequence; ortholog of PRCDC_0100900
vacuolar protein sorting-associated protein VTA1, putative
part of same gene as PRSY57_0100900A; gap found within coding sequence
part of same gene as PRSY57_0100900B; gap found within coding sequence
vacuolar protein sorting-associated protein 51, putative
parasite-infected erythrocyte surface protein
thrombospondin-related sporozoite protein
gap found within coding sequence; ortholog of PRCDC_0102000
conserved Plasmodium membrane protein, unknown function; part of same gene as PRSY57_0102000B; gap found within coding sequence
conserved Plasmodium membrane protein, unknown function; part of same gene as PRSY57_0102000A; gap found within coding sequence
StAR-related lipid transfer protein, putative
gap found within coding sequence; ortholog of PRCDC_0102200
ubiquitin carboxyl-terminal hydrolase 1, putative
part of same gene as PRSY57_0102200B; gap found within coding sequence
part of same gene as PRSY57_0102200A; gap found within coding sequence
4-hydroxy-3-methylbut-2-enyl diphosphate reductase
ortholog of PRCDC_0102900; annotated by similarity to unknown transcript annotated in PrCDC
unknown; annotated by similarity to unknown transcript annotated in PrCDC
encoded by transcript variant 2; alternatively spliced
encoded by transcript variant 1; alternatively spliced
conserved Plasmodium protein, unknown function; transcript variant 2; alternatively spliced
conserved Plasmodium protein, unknown function; transcript variant 1; alternatively spliced
vacuolar ATP synthase subunit c, putative
pre-rRNA-processing protein TSR2, putative
small ribosomal subunit assembling AARP2 protein
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, putative
gap found within coding sequence; ortholog of PRCDC_0104900
part of same gene as PRSY57_0104900B; gap found within coding sequence
part of same gene as PRSY57_0104900A; gap found within coding sequence
carbon catabolite repressor protein 4, putative
serine/threonine protein kinase, putative
conserved Plasmodium membrane protein, unknown function
double-strand break repair protein MRE11, putative
proteasome subunit beta type-3, putative
transcript variant 1; alternatively spliced
transcript variant 2; alternatively spliced
photosensitized INA-labeled protein 1, PhIL1, putative
mRNA cleavage factor-like protein, putative
fatty acid elongation protein, GNS1/SUR4 family, putative
gap found within coding sequence; ortholog of PRCDC_0107700
phosphatidate cytidylyltransferase, putative
part of same gene as PRSY57_0107700B, PRSY57_0107700C, PRSY57_0107700D.2, PRSY57_0107700D.1; gap found within coding sequence
part of same gene as PRSY57_0107700A, PRSY57_0107700C, PRSY57_0107700D.2, PRSY57_0107700D.1; gap found within coding sequence
part of same gene as PRSY57_0107700A, PRSY57_0107700B, PRSY57_0107700D.2, PRSY57_0107700D.1; gap found within coding sequence
part of same gene as PRSY57_0107700A, PRSY57_0107700B, PRSY57_0107700C, PRSY57_0107700D.2; transcript variant 1; alternatively spliced; gap found within coding sequence
part of same gene as PRSY57_0107700A, PRSY57_0107700B, PRSY57_0107700C, PRSY57_0107700D.1; transcript variant 2; alternatively spliced; gap found within coding sequence
selenocysteine-specific elongation factor selB- like protein
phosphatidylinositol-4-phosphate 5-kinase, putative
chromatin assembly factor 1 protein WD40 domain, putative
transcription initiation factor TFIIB, putative
adenylate kinase-like protein 1, putative
kinesin-8, putative; ortholog of PRCDC_0108800; may be nonfunctional due to frameshift
multidrug resistance-associated protein 1