Thermothielavioides terrestris NRRL 8126 chromosome 6, complete sequence.
Thermothielavioides terrestris NRRL 8126
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Sordariales; Chaetomiaceae; Thermothielavioides; Thermothielavioides terrestris.
Comparative genomic analysis of the thermophilic biomass-degrading fungi Myceliophthora thermophila and Thielavia terrestris
Submitted (29-NOV-2019) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA
Submitted (09-AUG-2011) US DOE Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598-1698, USA
PROVISIONAL REFSEQ: This record has not yet been subject to final\nNCBI review. The reference sequence is identical to CP003014.\nURL -- http://www.jgi.doe.gov/fungi\nJGI Project ID: 4043154\nThe DNA was provided by Paul Harris (paha@novozymes.com)\nThe strain is available from the Northern Regional Reaearch\nLabortories (USDA) in Peoria, IL under NRRL 8126 and from the\nAmerican Type Culture Collection under ATCC 38088\nContacts: Randy Berka (RAMB@novozymes.com)\n Igor Grigoriev (ivgrigoriev@lbl.gov)\nAssembly and annotation done by JGI.\nThe JGI and collaborators endorse the principles for the\ndistribution and use of large scale sequencing data adopted by the\nlarger genome sequencing community and urge users of this data to\nfollow them. It is our intention to publish the work of this\nproject in a timely fashion and we welcome collaborative\ninteraction on the project and analysis.\n(http://www.genome.gov/page.cfm?pageID=10506376).\n\n##Metadata-START##\nOrganism Display Name :: Thielavia terrestris NRRL 8126\nGOLD Stamp ID :: Gi01746\nAssembly Method :: Arachne v.20071016\nAssembly Name :: Thielavia terrestris V2.0\nSequencing Technology :: Sanger\nSequencing Depth :: 10.15x\n##Metadata-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: INSDC submitter\nAnnotation Status :: Full annotation\nAnnotation Pipeline :: Eukaryotic Annotation Propagation Pipeline\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
1| histone h2a [Grosmannia clavigera kw1407]. Contains conserved domain H2A[cd00074], Histone 2A
Contains conserved domain WD40[cd00200], WD40 domain and SMC_prok_A[TIGR02169], SMC (structural maintenance of chromosomes.)
mitochondrial 37S ribosomal protein RSM19
102] Contains conserved domain COG5162[COG5162], Transcription initiation factor TFIID, subunit TAF10 (also component of histone acetyltransferase SAGA)
Contains conserved domain Mif2[pfam11699], Mif2 is a yeast DNA-binding kinetochore protein which is orthologous to mammalian CENP-C
Contains conserved domain COG5531[COG5531], SWIB-domain-containing proteins implicated in chromatin remodeling
Extracellular Laccase - like Multicopper - like protein
Contains conserved domains: COG5034, TNG2, Chromatin remodeling protein, contains PhD zinc finger and PRK07003, DNA polymerase III subunits gamma and tau
mitochondrial 37S ribosomal protein RSM25
Also contains a polyglutamate rich tract of 32 Glutamate residues within a 42 amino acid stretch.
Contains conserved domain: pfam00385, Chromo, 'chromo' (CHRromatin Organisation MOdifier) domain
Contains conserved domain:cd07067, HP_PGM_like, Histidine phosphatase domain found in phosphoglycerate mutases and related proteins.
mitochondrial 54S ribosomal protein YmL9
Contains conserved domains cd00200], WD40 domain and LisH[pfam08513], The LisH (lis homology) domain mediates protein dimerization and tetramerisation.
Contains conserved domain PRK12678[PRK12678], transcription termination factor Rho
1| protein methyltransferase [Grosmannia clavigera kw1407]
1| histone H3 [Neurospora crassa]. Contains conserved domain PTZ00018[PTZ00018], histone 3
Contains conserved domain H4[cd00076], Histone H4
S-adenosylmethionine-dependent methyltransferase superfamily domain-containing protein
Contains conserved domain DUF3425[pfam11905], This presumed domain is functionally uncharacterized
mitochondrial 54S ribosomal protein YmL47
mitochondrial 54S ribosomal protein YmL33
Contains conserved domains: pfam05712, MRG, MRG binds a plethora of transcriptional regulators and chromatin-remodeling factors, and pfam11717, Tudor-knot, RNA binding activity-knot of a chromodomain
Contains conserved domains Fungal_trans[pfam04082] and Zn_clus[pfam00172].
carbohydrate-binding module family 1 protein