Thermothielavioides terrestris NRRL 8126 chromosome 4, complete sequence.
Thermothielavioides terrestris NRRL 8126
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Sordariales; Chaetomiaceae; Thermothielavioides; Thermothielavioides terrestris.
Comparative genomic analysis of the thermophilic biomass-degrading fungi Myceliophthora thermophila and Thielavia terrestris
Submitted (29-NOV-2019) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA
Submitted (09-AUG-2011) US DOE Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598-1698, USA
PROVISIONAL REFSEQ: This record has not yet been subject to final\nNCBI review. The reference sequence is identical to CP003012.\nURL -- http://www.jgi.doe.gov/fungi\nJGI Project ID: 4043154\nThe DNA was provided by Paul Harris (paha@novozymes.com)\nThe strain is available from the Northern Regional Reaearch\nLabortories (USDA) in Peoria, IL under NRRL 8126 and from the\nAmerican Type Culture Collection under ATCC 38088\nContacts: Randy Berka (RAMB@novozymes.com)\n Igor Grigoriev (ivgrigoriev@lbl.gov)\nAssembly and annotation done by JGI.\nThe JGI and collaborators endorse the principles for the\ndistribution and use of large scale sequencing data adopted by the\nlarger genome sequencing community and urge users of this data to\nfollow them. It is our intention to publish the work of this\nproject in a timely fashion and we welcome collaborative\ninteraction on the project and analysis.\n(http://www.genome.gov/page.cfm?pageID=10506376).\n\n##Metadata-START##\nOrganism Display Name :: Thielavia terrestris NRRL 8126\nGOLD Stamp ID :: Gi01746\nAssembly Method :: Arachne v.20071016\nAssembly Name :: Thielavia terrestris V2.0\nSequencing Technology :: Sanger\nSequencing Depth :: 10.15x\n##Metadata-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: INSDC submitter\nAnnotation Status :: Full annotation\nAnnotation Pipeline :: Eukaryotic Annotation Propagation Pipeline\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
carbohydrate-binding module family 21 protein
Orthologue of Aspergillus niger catR (Fowler et al. 1993. Mol. Microbiol. 9:989-998). Orthologue of Aspergillus niger catR (Fowler et al. 1993. Mol. Microbiol. 9:989-998)
carbohydrate-binding module family 50 protein
mitochondrial 54S ribosomal protein YmL38/YmL34
orthologue of fatty acid elongase from Mortierella alpina
Contains conserved domain SCA7[pfam08313].
mitochondrial 54S ribosomal protein MRPL51
Contains conserved domain U3_snoRNA_assoc[pfam08297
Contains conserved domain SET[pfam00856], SET domain
Contains conserved domain SNF5[pfam04855], SNF5 / SMARCB1 / INI1
Contains conserved domain PTZ00180[PTZ00180], 60S ribosomal protein L2
mitochondrial 54S ribosomal protein YmL31
Contains conserved domain HAP5[COG5208], CCAAT-binding factor, subunit C and HHT1[COG2036], Histones H3 and H4 overlapping BUR6[COG5247], Class 2 transcription repressor NC2, alpha subunit (DRAP1 homolog)
carbohydrate-binding module family 1 protein
Contains conserved domain bZIP_1[pfam00170]
orthologue of Saccharomyces cerevisiae ERG24; orthologue of S. cerevisiae ERG24
CAZy_ID 269762; glycoside hydrolase family 12; CAZy_ID 269762. glycoside hydrolase family 12
histone H3-K79 methyltransferase-like protein
1|DOT1_CHAGB RecName: Full=Histone-lysine N-methyltransferase, H3 lysine-79 specific. AltName: Full=Histone H3-K79 methyltransferase Contains conserved domain DOT1[pfam08123], Histone methylation protein DOT1
Contains conserved domains: WAC_Acf1_DNA_bd[pfam10537], ACF (for ATP-utilising chromatin assembly and remodelling factor) and DDT[pfam02791].
Contains conserved domain STE[pfam02200], STE like transcription factor; and zf-C2H2[pfam00096], Zinc finger, C2H2 type. 001]. and zf-C2H2[pfam00096], Zinc finger, C2H2 type
Contains conserved domains DUF1709[pfam08174], conserved domain in the anillin family and PH[pfam00169], PH stands for pleckstrin homology.
Contains conserved domain H3[smart00428]
Has EST support. Only within the last exon
Contains conserved domains: cd00079, HELICc; cd00046, DEXDc; Bromodomain; pfam07529, HSA; pfam08880, QLQ. Contains conserved domains: cd00079, HELICc. cd00046, DEXDc. Bromodomain. pfam07529, HSA. pfam08880, QLQ
putative mitochondrial 54S ribosomal protein MNP1
histone acetyl transferase HAT1-like protein
1| histone acetyl transferase HAT1 [Glomerella graminicola M1. 001]. Contains conserved domain Hat1_N[pfam10394], This domain is the N-terminal half of the structure of histone acetyl transferase
Autophagy-related protein 15. Putative lipase activity. May be involved in lysis of subvacuolar cytoplasm to vacuole targeted bodies, intravacuolar autophagic bodies and of intravacuolar multivesicular body (MVB) vesicles. Autophagy-related protein 15. Putative lipase activity
SIR2 family histone deacetylase-like protein
Contains conserved domain SIR2-fam[cd01407]
Contains conserved domain POB3[COG5165], Nucleosome-binding factor SPN, POB3 subunit
Contains conserved domain: COG5218, YCG1, Chromosome condensation complex Condensin, subunit G
mitochondrial 54S ribosomal protein YmL23
Contains conserved domain WD40[cd00200], WD40 domain and overlapping COG2319[COG2319], FOG: WD40 repeat.
carbohydrate-binding module family 52 protein
2|RAD5_NEUCR RecName: Full=DNA repair protein rad-5 Contains conserved domain HepA[COG0553], Superfamily II DNA/RNA helicases, SNF2 family. HIRAN[pfam08797], HIRAN domain (HIP116, Rad5p N-terminal) and RING[cd00162], RING-finger
Shares amino acid sequence identity with pepsin family of aspartic proteases. Predicted extracellular protein (SignalP). Shares amino acid sequence identity with pepsin family of aspartic proteases. Predicted extracellular protein (SignalP)
mitochondrial 54S ribosomal protein YmL10/YmL18
mitochondrial 37S ribosomal protein YmS16