Thermothielavioides terrestris NRRL 8126 chromosome 2, complete sequence.
Thermothielavioides terrestris NRRL 8126
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Sordariales; Chaetomiaceae; Thermothielavioides; Thermothielavioides terrestris.
Comparative genomic analysis of the thermophilic biomass-degrading fungi Myceliophthora thermophila and Thielavia terrestris
Submitted (29-NOV-2019) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA
Submitted (09-AUG-2011) US DOE Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598-1698, USA
PROVISIONAL REFSEQ: This record has not yet been subject to final\nNCBI review. The reference sequence is identical to CP003010.\nURL -- http://www.jgi.doe.gov/fungi\nJGI Project ID: 4043154\nThe DNA was provided by Paul Harris (paha@novozymes.com)\nThe strain is available from the Northern Regional Reaearch\nLabortories (USDA) in Peoria, IL under NRRL 8126 and from the\nAmerican Type Culture Collection under ATCC 38088\nContacts: Randy Berka (RAMB@novozymes.com)\n Igor Grigoriev (ivgrigoriev@lbl.gov)\nAssembly and annotation done by JGI.\nThe JGI and collaborators endorse the principles for the\ndistribution and use of large scale sequencing data adopted by the\nlarger genome sequencing community and urge users of this data to\nfollow them. It is our intention to publish the work of this\nproject in a timely fashion and we welcome collaborative\ninteraction on the project and analysis.\n(http://www.genome.gov/page.cfm?pageID=10506376).\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: INSDC submitter\nAnnotation Status :: Full annotation\nAnnotation Pipeline :: Eukaryotic Annotation Propagation Pipeline\n##Genome-Annotation-Data-END##\n\n##Metadata-START##\nOrganism Display Name :: Thielavia terrestris NRRL 8126\nGOLD Stamp ID :: Gi01746\nAssembly Method :: Arachne v.20071016\nAssembly Name :: Thielavia terrestris V2.0\nSequencing Technology :: Sanger\nSequencing Depth :: 10.15x\n##Metadata-END##\nCOMPLETENESS: full length.
carbohydrate-binding module family 18 protein
mitochondrial 37S ribosomal protein MRPS16
1| putative SMC5 protein [Sordaria macrospora]. Contains conserved domain SbcC[COG0419], ATPase involved in DNA repair, ABC_SMC5_euk[cd03277], Eukaryotic SMC5 proteins. and SMC_N[pfam02463], RecF/RecN/SMC N terminal domain
2-dehydropantoate 2-reductase-like protein
1| 2-dehydropantoate 2-reductase [Grosmannia clavigera kw1407] Contains conserved domain PRK08229[PRK08229], 2-dehydropantoate 2-reductase
sterol-4-alpha-carboxylate 3-dehydrogenase
orthologue of Saccharomyces cerevisiae ERG26; orthologue of S. cerevisiae ERG26
Contains conserved domains Ofd1_CTDD[pfam10637], Ofd1 is a prolyl 4-hydroxylase-like 2-oxoglutarate-Fe(II) dioxygenase and EGL-9[COG3751], Predicted proline hydroxylase
orthologue of Saccharomyces cerevisiae ERG6p; orthologue of S. cerevisiae ERG6p
homoserine O-acetyltransferase-like protein
Contains conserved domain: PRK08775[PRK08775], homoserine O-acetyltransferase
Contains conserved domain SIR2[COG0846], NAD-dependent protein deacetylases, SIR2 family
Laccase - like Multicopper - like protein
mitochondrial 37S ribosomal protein MRP2
Has EST support. at beginning and end of protein and doesn't match exons
Contains conserved domain Med17[pfam10156], Subunit 17 of Mediator complex.
Contains conserved domain PP2C_SIG[smart00331], Sigma factor PP2C-like phosphatases.
mitochondrial 54S ribosomal protein RML2
Contains conserved domain HLH[pfam00010], Helix-loop-helix DNA-binding domain
chromatin remodelling complex subunit-like protein
Contains conserved domain CRC_subunit[pfam08624], This family has been identified as a subunit of chromatin remodelling complex and PAT1[pfam09770]. 1| chromatin remodelling complex subunit [Glomerella graminicola M1. 001]. Contains conserved domain CRC_subunit[pfam08624], This family has been identified as a subunit of chromatin remodelling complex and PAT1[pfam09770]
S-adenosylmethionine-dependent methyltransferase superfamily domain-containing protein
putative mitochondrial 37S ribosomal protein MRPS12
Has EST support. For the second (last) exon only
Contains conserved domains: cd02335, ZZ_ADA2, Zinc finger, ZZ type. Zinc finger present in ADA2, pfam04433, SWIRM, SWIRM domain and COG5114, COG5114, Histone acetyltransferase complex SAGA/ADA, subunit ADA2.
Contains conserved domain SH3_1[pfam00018], SH3 (Src homology 3) domain.
Contains conserved domain PAT1[pfam09770], Topoisomerase II-associated protein PAT1
Contains conserved domain ANK[cd00204], ankyrin repeats
Contains conserved domain CUE[pfam02845], CUE domains have been shown to bind ubiquitin
Contains conserved domains (4) Annexin[pfam00191]. 1| annexin [Grosmannia clavigera kw1407]. Contains conserved domains (4) Annexin[pfam00191]
Same as Protein ID 2108679 Gene model fgenesh_kz1_kg.chromosome_1_#_2638_#_18523. Contains conserved domain Clr2[pfam10383], Transcription-silencing protein Clr2; Clr2 is a chromatin silencing protein
1| SAGA-like transcriptional regulatory complex subunit Spt3 [Metarhizium anisopliae ARSEF 23] Contains conserved domain TFIID-18kDa[pfam02269], Transcription initiation factor IID, 18kD subunit. This family includes the Spt3 yeast transcription factors
Contains conserved domains: cd02336, ZZ_RSC8, Zinc finger. pfam04433, SWIRM domain. smart00291, ZnF_ZZ, CREB-binding protein. COG5259, RSC8, RSC chromatin remodeling complex subunit RSC8. COG5114, Histone acetyltransferase complex SAGA/ADA, subunit ADA2
mitochondrial 54S ribosomal protein YmL3
orthologue of C-4 methyl sterol oxidase B from Penicillium chrysogenum
Contains conserved domain PRK10905[PRK10905]
orthologue of delta-9 desaturase from Histoplasma capsulatum
orthologue of Saccharomyces cerevisiae ERG5; orthologue of S. cerevisiae ERG5
Contains conserved domain RanBD[smart00160], Ran-binding domain
Contains conserved domain WD40[cd00200], WD40 domain
Contains conserved domains SNF5[pfam04855] and GATA[pfam00320].
Four conserved domains DUF3659[pfam12396], Protein of unknown function.
1| DNA repair and recombination protein RAD5B [Neurospora crassa] Contains conserved domain HepA[COG0553], Superfamily II DNA/RNA helicases, SNF2 family. HIRAN[pfam08797], HIRAN domain (HIP116, Rad5p N-terminal), RAD18[COG5432], and RING[cd00162], RING-finger
mitochondrial 54S ribosomal protein YmL19
Contains conserved domain H4[cd00076], Histone H4
Contains conserved domains 3 of TPR[cd00189], Tetratricopeptide repeat domain and one NARP1[pfam12569].