Pandoraea oxalativorans strain DSM 23570 plasmid pPO70-1, complete sequence.
Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.
Pandoraea oxalativorans DSM 23570 Genome Sequencing
Submitted (15-JUN-2016) Division of Genetics and Molecular Biology, Institute of Biological Sciences, University of Malaya, Kuala Lumpur 50603, Malaysia
Submitted (20-MAY-2015) Division of Genetics and Molecular Biology, Institute of Biological Sciences, University of Malaya, Jalan Universiti, Kuala Lumpur, Wilayah Persekutuan Kuala Lumpur 50603, Malaysia
REFSEQ INFORMATION: The reference sequence is identical to\nCP011518.2.\n\nOn Jul 3, 2016 this sequence version replaced NZ_CP011518.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\nThis genome has a base modification file available.\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 05/03/2023 05:44:05\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 5,779\nCDSs (total) :: 5,695\nGenes (coding) :: 5,360\nCDSs (with protein) :: 5,360\nGenes (RNA) :: 84\nrRNAs :: 4, 4, 4 (5S, 16S, 23S)\ncomplete rRNAs :: 4, 4, 4 (5S, 16S, 23S)\ntRNAs :: 66\nncRNAs :: 6\nPseudo Genes (total) :: 335\nCDSs (without protein) :: 335\nPseudo Genes (ambiguous residues) :: 0 of 335\nPseudo Genes (frameshifted) :: 105 of 335\nPseudo Genes (incomplete) :: 280 of 335\nPseudo Genes (internal stop) :: 36 of 335\nPseudo Genes (multiple problems) :: 72 of 335\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_011544710.1
incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF024408.2
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF015038.2
COORDINATES: similar to AA sequence:RefSeq:WP_011487433.1
COORDINATES: similar to AA sequence:RefSeq:WP_013813157.1
COORDINATES: similar to AA sequence:RefSeq:WP_004527925.1
COORDINATES: similar to AA sequence:RefSeq:WP_006755936.1
GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015737.2
autotransporter outer membrane beta-barrel domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_018716047.1
GO:1990397 - queuosine salvage [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008596901.1
PTS glucitol/sorbitol transporter subunit IIA
COORDINATES: similar to AA sequence:RefSeq:WP_011809972.1
PTS glucitol/sorbitol transporter subunit IIB
COORDINATES: protein motif:HMM:NF015565.2
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
PTS glucitol/sorbitol transporter subunit IIC
COORDINATES: similar to AA sequence:RefSeq:WP_003104851.1
GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO:0055085 - transmembrane transport [Evidence IEA]
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_017233443.1
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_013699797.1
COORDINATES: protein motif:HMM:TIGR00180.1
GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
ParB/RepB/Spo0J family partition protein
COORDINATES: protein motif:HMM:NF018714.2
COORDINATES: nucleotide motif:Rfam:14.4:RF01850
betaproteobacterial-type; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_009892093.1
COORDINATES: protein motif:HMM:TIGR01414.1
autotransporter domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006482547.1
COORDINATES: protein motif:HMM:NF013677.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO:0006313 - transposition, DNA-mediated [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012218041.1
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_076612266.1
GO:0004803 - transposase activity [Evidence IEA]
internal stop; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_076611183.1
frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_013700281.1
COORDINATES: similar to AA sequence:RefSeq:WP_017335482.1
DDE-type integrase/transposase/recombinase
COORDINATES: similar to AA sequence:RefSeq:WP_010974257.1
COORDINATES: similar to AA sequence:RefSeq:WP_006615225.1
GO:0003886 - DNA (cytosine-5-)-methyltransferase activity [Evidence IEA]; GO:0008168 - methyltransferase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO:0006304 - DNA modification [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005990193.1
COORDINATES: protein motif:HMM:NF013964.2
GO:0004519 - endonuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF026288.2
COORDINATES: similar to AA sequence:RefSeq:WP_076611281.1
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
GO:0015074 - DNA integration [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015004360.1
COORDINATES: similar to AA sequence:RefSeq:WP_013394638.1
COORDINATES: similar to AA sequence:RefSeq:WP_012355561.1
COORDINATES: similar to AA sequence:RefSeq:WP_003284407.1
COORDINATES: similar to AA sequence:RefSeq:WP_004552250.1
COORDINATES: similar to AA sequence:RefSeq:WP_011002488.1
COORDINATES: protein motif:HMM:NF024940.2
helix-turn-helix domain-containing protein
frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF019984.2
group II intron maturase-specific domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_076612022.1
integrase core domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_019088945.1
COORDINATES: similar to AA sequence:RefSeq:WP_009770530.1
COORDINATES: protein motif:HMM:NF012376.2
GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF017528.2
IS66 family insertion sequence element accessory protein TnpB
COORDINATES: similar to AA sequence:RefSeq:WP_011493645.1
COORDINATES: similar to AA sequence:RefSeq:WP_006765345.1
COORDINATES: similar to AA sequence:RefSeq:WP_008343662.1
COORDINATES: similar to AA sequence:RefSeq:WP_047215127.1
COORDINATES: similar to AA sequence:RefSeq:WP_011548482.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611796.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611807.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611775.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611305.1
programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_076612095.1
COORDINATES: protein motif:HMM:NF019310.2
COORDINATES: similar to AA sequence:RefSeq:WP_011727847.1
COORDINATES: similar to AA sequence:RefSeq:WP_020205537.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0050661 - NADP binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF012772.2
COORDINATES: similar to AA sequence:RefSeq:WP_015875678.1
GO:0016740 - transferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009823267.1
GO:0016829 - lyase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF027494.2
COORDINATES: similar to AA sequence:RefSeq:WP_014193471.1
GO:0004222 - metalloendopeptidase activity [Evidence IEA]
GO:0071586 - CAAX-box protein processing [Evidence IEA]
CPBP family intramembrane metalloprotease
COORDINATES: similar to AA sequence:RefSeq:WP_012760845.1
frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_076611092.1
COORDINATES: similar to AA sequence:RefSeq:WP_012210240.1
COORDINATES: protein motif:HMM:TIGR03173.1
GO:0015205 - nucleobase transmembrane transporter activity [Evidence IEA]
nucleobase:cation symporter-2 family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011806216.1
GO:0019239 - deaminase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0009116 - nucleoside metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF017081.2
COORDINATES: similar to AA sequence:RefSeq:WP_007875004.1
COORDINATES: similar to AA sequence:RefSeq:WP_006029060.1
GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
trimeric intracellular cation channel family protein
COORDINATES: protein motif:HMM:NF025345.2
COORDINATES: protein motif:HMM:NF015398.2
CesD/SycD/LcrH family type III secretion system chaperone
type III secretion system translocon subunit SctE
COORDINATES: protein motif:HMM:NF012798.2
GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: protein motif:HMM:NF013236.2
FliM/FliN family flagellar motor switch protein
COORDINATES: similar to AA sequence:RefSeq:WP_076611304.1
frameshifted; internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_019840300.1
GO:0030257 - type III protein secretion system complex [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
GO:0046034 - ATP metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017490900.1
EscV/YscV/HrcV family type III secretion system export apparatus protein
COORDINATES: similar to AA sequence:RefSeq:WP_015870356.1
COORDINATES: similar to AA sequence:RefSeq:WP_006579920.1
GO:0030254 - protein secretion by the type III secretion system [Evidence IEA]
type III secretion system export apparatus subunit SctR
COORDINATES: similar to AA sequence:RefSeq:WP_012847746.1
type III secretion system export apparatus subunit SctS
COORDINATES: similar to AA sequence:RefSeq:WP_015683273.1
type III secretion system export apparatus subunit SctT
COORDINATES: protein motif:HMM:NF013479.2
EscU/YscU/HrcU family type III secretion system export apparatus switch protein
COORDINATES: similar to AA sequence:RefSeq:WP_014088689.1
GO:0016798 - hydrolase activity, acting on glycosyl bonds [Evidence IEA]
lytic transglycosylase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015870362.1
COORDINATES: similar to AA sequence:RefSeq:WP_011136146.1
COORDINATES: similar to AA sequence:RefSeq:WP_015461059.1
GO:0019867 - outer membrane [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012847721.1
type III secretion system domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015870333.1
type III secretion inner membrane ring lipoprotein SctJ
COORDINATES: similar to AA sequence:RefSeq:WP_019840890.1
COORDINATES: protein motif:HMM:NF024242.2
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: protein motif:HMM:NF020557.2
EscE/YscE/SsaE family type III secretion system needle protein co-chaperone
COORDINATES: similar to AA sequence:RefSeq:WP_005356755.1
type III secretion system inner membrane ring subunit SctD
COORDINATES: similar to AA sequence:RefSeq:WP_019840887.1
EscC/YscC/HrcC family type III secretion system outer membrane ring protein
COORDINATES: similar to AA sequence:RefSeq:WP_019840886.1
COORDINATES: protein motif:HMM:NF037233.2
COORDINATES: similar to AA sequence:RefSeq:WP_012405348.1
COORDINATES: similar to AA sequence:RefSeq:WP_012508902.1
type II toxin-antitoxin system HipA family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_015766631.1
helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_012732717.1
frameshifted; internal stop; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF016343.2
COORDINATES: similar to AA sequence:RefSeq:WP_003274030.1
COORDINATES: similar to AA sequence:RefSeq:WP_004424728.1
type II toxin-antitoxin system prevent-host-death family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_007606984.1
type II toxin-antitoxin system VapC family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_076611088.1
COORDINATES: similar to AA sequence:RefSeq:WP_011801855.1
COORDINATES: similar to AA sequence:RefSeq:WP_001567368.1
COORDINATES: similar to AA sequence:RefSeq:WP_018435911.1
COORDINATES: similar to AA sequence:RefSeq:WP_011880277.1
COORDINATES: similar to AA sequence:RefSeq:WP_011749831.1
TnpB, as the term is used for proteins encoded by IS66 family insertion elements, is considered an accessory protein, since TnpC, encoded by a neighboring gene, is a DDE family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_012339753.1
COORDINATES: similar to AA sequence:RefSeq:WP_011881631.1
COORDINATES: similar to AA sequence:RefSeq:WP_011235976.1
COORDINATES: similar to AA sequence:RefSeq:WP_086558218.1
COORDINATES: nucleotide motif:Rfam:14.4:RF01497
AL1L pseudoknot; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_086558191.1
COORDINATES: protein motif:HMM:NF024954.2
COORDINATES: similar to AA sequence:RefSeq:WP_011801138.1
COORDINATES: protein motif:HMM:NF013698.2
COORDINATES: similar to AA sequence:RefSeq:WP_015042013.1
COORDINATES: similar to AA sequence:RefSeq:WP_011288069.1
nucleotidyl transferase AbiEii/AbiGii toxin family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013961679.1
COORDINATES: protein motif:HMM:NF022633.2
COORDINATES: protein motif:HMM:NF033516.0
COORDINATES: similar to AA sequence:RefSeq:WP_076611586.1
COORDINATES: similar to AA sequence:RefSeq:WP_076612036.1
COORDINATES: similar to AA sequence:RefSeq:WP_008230213.1
TnpB, as the term is used for proteins encoded by IS66 family insertion elements, is considered an accessory protein, since TnpC, encoded by a neighboring gene, is a DDE family transposase.; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_020067064.1
COORDINATES: similar to AA sequence:RefSeq:WP_002718874.1
GO:0016151 - nickel cation binding [Evidence IEA]
GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010661157.1
COORDINATES: similar to AA sequence:RefSeq:WP_042551150.1
COORDINATES: similar to AA sequence:RefSeq:WP_011515356.1
COORDINATES: similar to AA sequence:RefSeq:WP_013700206.1
COORDINATES: similar to AA sequence:RefSeq:WP_007182918.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007182920.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611267.1
COORDINATES: similar to AA sequence:RefSeq:WP_018420717.1
internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_017172642.1
COORDINATES: similar to AA sequence:RefSeq:WP_017154897.1
COORDINATES: similar to AA sequence:RefSeq:WP_009523606.1
COORDINATES: similar to AA sequence:RefSeq:WP_017450741.1
COORDINATES: similar to AA sequence:RefSeq:WP_011793852.1
COORDINATES: similar to AA sequence:RefSeq:WP_012492245.1
COORDINATES: similar to AA sequence:RefSeq:WP_012638432.1
COORDINATES: similar to AA sequence:RefSeq:WP_007182959.1
COORDINATES: similar to AA sequence:RefSeq:WP_013512170.1
COORDINATES: similar to AA sequence:RefSeq:WP_020909877.1
COORDINATES: similar to AA sequence:RefSeq:WP_004533799.1
COORDINATES: similar to AA sequence:RefSeq:WP_005896566.1
COORDINATES: similar to AA sequence:RefSeq:WP_009899832.1
COORDINATES: similar to AA sequence:RefSeq:WP_001667685.1
COORDINATES: similar to AA sequence:RefSeq:WP_018312815.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611340.1
COORDINATES: similar to AA sequence:RefSeq:WP_018413492.1
type II toxin-antitoxin system RelB/DinJ family antitoxin
COORDINATES: protein motif:HMM:NF013540.2
COORDINATES: similar to AA sequence:RefSeq:WP_046292373.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611695.1
COORDINATES: similar to AA sequence:RefSeq:WP_011490102.1
COORDINATES: similar to AA sequence:RefSeq:WP_004086710.1
COORDINATES: similar to AA sequence:RefSeq:WP_012471715.1
COORDINATES: similar to AA sequence:RefSeq:WP_013690338.1
COORDINATES: similar to AA sequence:RefSeq:WP_076612008.1
COORDINATES: protein motif:HMM:NF013828.2
COORDINATES: similar to AA sequence:RefSeq:WP_076611812.1
COORDINATES: similar to AA sequence:RefSeq:WP_013700242.1
COORDINATES: similar to AA sequence:RefSeq:WP_011000219.1
COORDINATES: similar to AA sequence:RefSeq:WP_076612155.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611964.1
COORDINATES: similar to AA sequence:RefSeq:WP_007735681.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611076.1
COORDINATES: similar to AA sequence:RefSeq:WP_009770283.1
COORDINATES: similar to AA sequence:RefSeq:WP_007537611.1
GO:0016151 - nickel cation binding [Evidence IEA]; GO:0009039 - urease activity [Evidence IEA]
GO:0019627 - urea metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006466549.1
GO:0035550 - urease complex [Evidence IEA]
GO:0043419 - urea catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007880740.1
COORDINATES: similar to AA sequence:RefSeq:WP_010661151.1
COORDINATES: similar to AA sequence:RefSeq:WP_015314500.1
COORDINATES: similar to AA sequence:RefSeq:WP_018183875.1
GO:0046872 - metal ion binding [Evidence IEA]; GO:0016530 - metallochaperone activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002971872.1
GO:0051116 - cobaltochelatase activity [Evidence IEA]
GO:0009236 - cobalamin biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007010279.1
COORDINATES: similar to AA sequence:RefSeq:WP_006475990.1
COORDINATES: similar to AA sequence:RefSeq:WP_006484960.1
COORDINATES: protein motif:HMM:NF014543.2
COORDINATES: similar to AA sequence:RefSeq:WP_006393833.1
COORDINATES: similar to AA sequence:RefSeq:WP_017235271.1
COORDINATES: similar to AA sequence:RefSeq:WP_009945034.1
COORDINATES: similar to AA sequence:RefSeq:WP_017231662.1
COORDINATES: similar to AA sequence:RefSeq:WP_012213865.1
COORDINATES: similar to AA sequence:RefSeq:WP_015001942.1
COORDINATES: similar to AA sequence:RefSeq:WP_076611071.1
COORDINATES: protein motif:HMM:NF019846.2
GO:0008168 - methyltransferase activity [Evidence IEA]
methyltransferase domain-containing protein
COORDINATES: protein motif:HMM:NF012464.2
COORDINATES: similar to AA sequence:RefSeq:WP_076611480.1
COORDINATES: similar to AA sequence:RefSeq:WP_006476480.1
COORDINATES: similar to AA sequence:RefSeq:WP_013699837.1
COORDINATES: similar to AA sequence:RefSeq:WP_012732870.1
COORDINATES: similar to AA sequence:RefSeq:WP_012606398.1
COORDINATES: similar to AA sequence:RefSeq:WP_006026243.1
COORDINATES: protein motif:HMM:NF013315.2
rRNA adenine N-6-methyltransferase family protein
COORDINATES: protein motif:HMM:NF022104.2
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009906669.1
COORDINATES: similar to AA sequence:RefSeq:WP_012354406.1
COORDINATES: similar to AA sequence:RefSeq:WP_076612300.1
COORDINATES: similar to AA sequence:RefSeq:NP_250874.1
COORDINATES: protein motif:HMM:NF017758.2
COORDINATES: similar to AA sequence:RefSeq:WP_003296906.1
COORDINATES: protein motif:HMM:NF012514.2
COORDINATES: similar to AA sequence:RefSeq:WP_009907263.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020309499.1
COORDINATES: similar to AA sequence:RefSeq:WP_013588587.1
COORDINATES: similar to AA sequence:RefSeq:WP_009916533.1
COORDINATES: similar to AA sequence:RefSeq:WP_000994919.1
ParB/Srx family N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_017330817.1
GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]; GO:0001072 - transcription antitermination factor activity, RNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017231944.1
COORDINATES: protein motif:HMM:NF012584.2
COORDINATES: similar to AA sequence:RefSeq:WP_011052937.1
COORDINATES: similar to AA sequence:RefSeq:WP_004542720.1
COORDINATES: similar to AA sequence:RefSeq:WP_017164708.1
type IV secretion system DNA-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007966859.1
COORDINATES: similar to AA sequence:RefSeq:WP_007966857.1
COORDINATES: similar to AA sequence:RefSeq:WP_008345283.1
COORDINATES: similar to AA sequence:RefSeq:WP_008343655.1
GO:0043684 - type IV secretion system complex [Evidence IEA]
GO:0044097 - secretion by the type IV secretion system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005931779.1
COORDINATES: similar to AA sequence:RefSeq:WP_011345603.1
P-type conjugative transfer protein VirB9
COORDINATES: similar to AA sequence:RefSeq:WP_019303576.1
COORDINATES: similar to AA sequence:RefSeq:WP_017167764.1
COORDINATES: similar to AA sequence:RefSeq:WP_017171755.1
COORDINATES: similar to AA sequence:RefSeq:WP_014194531.1
COORDINATES: similar to AA sequence:RefSeq:WP_019303572.1
COORDINATES: similar to AA sequence:RefSeq:WP_005931796.1
COORDINATES: similar to AA sequence:RefSeq:WP_008343663.1
VirB3 family type IV secretion system protein
COORDINATES: similar to AA sequence:RefSeq:WP_008345293.1
COORDINATES: similar to AA sequence:RefSeq:WP_014194526.1
COORDINATES: similar to AA sequence:RefSeq:WP_016495419.1
COORDINATES: similar to AA sequence:RefSeq:WP_011004276.1
COORDINATES: similar to AA sequence:RefSeq:WP_014631551.1
COORDINATES: similar to AA sequence:RefSeq:WP_019430793.1
COORDINATES: protein motif:HMM:NF039621.1
COORDINATES: similar to AA sequence:RefSeq:WP_014630785.1
GO:0015035 - protein-disulfide reductase activity [Evidence IEA]
GO:0006457 - protein folding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_076611505.1
COORDINATES: protein motif:HMM:NF025189.2
COORDINATES: similar to AA sequence:RefSeq:WP_012339368.1
COORDINATES: similar to AA sequence:RefSeq:WP_006752328.1
type II toxin-antitoxin system VapB family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_007182926.1
programmed frameshift; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_007195671.1
COORDINATES: similar to AA sequence:RefSeq:WP_018055240.1
GO:0008080 - N-acetyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF020419.2
COORDINATES: similar to AA sequence:RefSeq:WP_007182862.1
COORDINATES: similar to AA sequence:RefSeq:WP_086558188.1
COORDINATES: similar to AA sequence:RefSeq:WP_011301812.1
COORDINATES: protein motif:HMM:NF018933.2
COORDINATES: similar to AA sequence:RefSeq:WP_011353999.1
COORDINATES: protein motif:HMM:NF012698.2
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
winged helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009618278.1
COORDINATES: protein motif:HMM:NF019315.2
GO:0071111 - cyclic-guanylate-specific phosphodiesterase activity [Evidence IEA]
GGDEF domain-containing phosphodiesterase
COORDINATES: similar to AA sequence:RefSeq:WP_011631164.1
GO:0016757 - glycosyltransferase activity [Evidence IEA]
autotransporter strand-loop-strand O-heptosyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_014898219.1
COORDINATES: similar to AA sequence:RefSeq:NP_858152.1
COORDINATES: similar to AA sequence:RefSeq:WP_011548120.1
GO:0005507 - copper ion binding [Evidence IEA]; GO:0005375 - copper ion transmembrane transporter activity [Evidence IEA]
GO:0006825 - copper ion transport [Evidence IEA]