Thermothelomyces thermophilus ATCC 42464 chromosome 5, complete sequence.
Thermothelomyces thermophilus ATCC 42464
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Sordariales; Chaetomiaceae; Thermothelomyces.
Comparative genomic analysis of the thermophilic biomass-degrading fungi Myceliophthora thermophila and Thielavia terrestris
Submitted (27-NOV-2019) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA
Submitted (08-AUG-2011) US DOE Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598-1698, USA
PROVISIONAL REFSEQ: This record has not yet been subject to final\nNCBI review. The reference sequence is identical to CP003006.\nURL -- http://www.jgi.doe.gov/fungi\nJGI Project ID: 4043098\nThe DNA was provided by Adrian Tsang (tsang@gene.concordia.ca)\nThe strain is available from the American Type Culture Collection\nunder ATCC 42464\nContacts: Adrian Tsang (tsang@gene.concordia.ca)\n Igor Grigoriev (ivgrigoriev@lbl.gov)\nAssembly and annotation done by JGI.\nThe JGI and collaborators endorse the principles for the\ndistribution and use of large scale sequencing data adopted by the\nlarger genome sequencing community and urge users of this data to\nfollow them. It is our intention to publish the work of this\nproject in a timely fashion and we welcome collaborative\ninteraction on the project and analysis.\n(http://www.genome.gov/page.cfm?pageID=10506376).\n\n##Metadata-START##\nOrganism Display Name :: Myceliophthora thermophila ATCC 42464\nGOLD Stamp ID :: Gi01755\nAssembly Method :: Arachne v.20071016\nAssembly Name :: Myceliophthora thermophila V2.0\nSequencing Technology :: Sanger\nSequencing Depth :: 7.66x\n##Metadata-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: INSDC submitter\nAnnotation Status :: Full annotation\nAnnotation Pipeline :: Eukaryotic Annotation Propagation Pipeline\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
Contains conserved domains Zn_clus[pfam00172], Fungal Zn(2)-Cys(6) binuclear cluster domain and Fungal_trans[pfam04082], Fungal specific transcription factor domain.
NADP-dependent dehydrogenase-like protein
orthologue of Aspergillus fumigatus Erg3C
phosphate-repressible phosphate permease
orthologue of Saccharomyces cerevisiae Erg12
Contains conserved domain SET[pfam00856], SET domains are protein lysine methyltransferase enzyme
has a string of 18 glutamate residues in a row. A polyglutamic acid can act as a template for core histone organization (Stein, A., et al. (1979)PNAS 76,5000-5004).
Contains conserved domain zf-H2C2[pfam09337], His(2)-Cys(2) zinc finger
Contains conserved domains: pfam02940, mRNA_triPase, mRNA capping enzyme, beta chain and pfam09770, PAT1, Topoisomerase II-associated protein PAT1 Members of this family are necessary for accurate chromosome transmission during cell division
D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase-like protein
Contains conserved domains: cd05511, Bromo_TFIID, Bromodomain, TFIID-like subfamily; pfam07524, Bromo_TP, Bromodomain associated and COG5076, COG5076, Transcription factor involved in chromatin remodeling, contains bromodomain
histone acetyltransferase SAS2-like protein
orthologue of Delta12 desaturase from Claviceps purpurea
pyridine nucleotide-disulfide oxidoreductase-like protein
hypothetical pyridine nucleotide-disulphide oxidoreductase
farnesyl-diphosphate farnesyl transferase
Orthologue of Saccharomyces cerevisiae Erg9; Orthologue of S. cerevisiae Erg9
Contains conserved domain H2B [smart00427]. Contains conserved domain H2B [smart00427]
ubiquitin carboxyl-terminal hydrolase-like protein
1| ubiquitin carboxyl-terminal hydrolase [Glomerella graminicola M1. 001] Contains conserved domain COG5077[COG5077], Ubiquitin carboxyl-terminal hydrolase
BAH domains are found in a variety of proteins playing roles in transcriptional silencing and the remodeling of chromatin. It is assumed that in most or all of these instances the BAH domain mediates protein-protein interactions. Also contains Bromodomain
carbohydrate-binding module family 1 protein
Has EST support. expressed more highly at 34C
Also contains conserved domain: COG5098, Chromosome condensation complex Condensin, subunit D2
Contains conserved domain SET[pfam00856], SET domains are protein lysine methyltransferase enzymes
Glyoxalase/bleomycin resistance protein/dioxygenase-like protein
Dihydrodipicolinate synthetase-like protein
Contains conserved domain FSH1[pfam03959], Serine hydrolase (FSH1)