Thermothelomyces thermophilus ATCC 42464 chromosome 4, complete sequence.
Thermothelomyces thermophilus ATCC 42464
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Sordariales; Chaetomiaceae; Thermothelomyces.
Comparative genomic analysis of the thermophilic biomass-degrading fungi Myceliophthora thermophila and Thielavia terrestris
Submitted (27-NOV-2019) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA
Submitted (08-AUG-2011) US DOE Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598-1698, USA
PROVISIONAL REFSEQ: This record has not yet been subject to final\nNCBI review. The reference sequence is identical to CP003005.\nURL -- http://www.jgi.doe.gov/fungi\nJGI Project ID: 4043098\nThe DNA was provided by Adrian Tsang (tsang@gene.concordia.ca)\nThe strain is available from the American Type Culture Collection\nunder ATCC 42464\nContacts: Adrian Tsang (tsang@gene.concordia.ca)\n Igor Grigoriev (ivgrigoriev@lbl.gov)\nAssembly and annotation done by JGI.\nThe JGI and collaborators endorse the principles for the\ndistribution and use of large scale sequencing data adopted by the\nlarger genome sequencing community and urge users of this data to\nfollow them. It is our intention to publish the work of this\nproject in a timely fashion and we welcome collaborative\ninteraction on the project and analysis.\n(http://www.genome.gov/page.cfm?pageID=10506376).\n\n##Metadata-START##\nOrganism Display Name :: Myceliophthora thermophila ATCC 42464\nGOLD Stamp ID :: Gi01755\nAssembly Method :: Arachne v.20071016\nAssembly Name :: Myceliophthora thermophila V2.0\nSequencing Technology :: Sanger\nSequencing Depth :: 7.66x\n##Metadata-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: INSDC submitter\nAnnotation Status :: Full annotation\nAnnotation Pipeline :: Eukaryotic Annotation Propagation Pipeline\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
CAZy_ID 268040; glycoside hydrolase family 13; CAZy_ID 268040. glycoside hydrolase family 13
fumarate reductase/succinate dehydrogenase flavo protein-like protein
Matches the lcc1 gene product encoding an extracellular laccase of Myceliophthora thermophila (Berka, R.M. et al. 1997. Appl. Environ. Microbiol. 63: 3151 3157). Laccasesare multicopper enzymes that catalyze the oxidation of a variety of phenolic compounds, with concomitant reduction of O2 to H2O
carbohydrate-binding module family 21 protein
Has EST support. very weak and only in last two exons
Contains conserved domain SET[pfam00856], SET domains are protein lysine methyltransferase enzymes.
carbohydrate-binding module family 18 protein
dTDP-D-glucose 4,6-dehydratase-like protein
hypothetical dTDP-D-glucose 4,6-dehydratase
protein of unknown function with Armadillo-type fold; protein of unknown function with armadillo-type fold; protein of unknown function with Armadillo-type fold. protein of unknown function with armadillo-type fold
ATPase, P type cation/copper-transporter
Intradiol ring-cleavage dioxygenase-like protein
orthologue of 3-Carboxy-cis,cis-muconate lactonizing enzyme from N. crassa; orthologue of 3-Carboxy-cis,cis-muconate lactonizing enzyme from N. crassa
Chromo domains mediate the interaction of the heterochromatin with other heterochromatin proteins, thereby affecting chromatin structure.
orthologue of Saccharomyces cerevisiae HMG-CoA synthase (Erg13)
orthologue of Saccharomyces cerevisiae ERG27p; orthologue of S. cerevisiae ERG27p
Dihydrodipicolinate synthetase-like protein
Contains conserved domain SIR2-fam[cd01407], SIR2 family of proteins includes silent information regulator 2, PRK14138[PRK14138], NAD-dependent deacetylase and DUF592[pfam04574].
1| RanGTP-binding protein [Glomerella graminicola M1. 001]Contains conserved domain Ran-binding[pfam05508], The small Ras-like GTPase Ran is also implicated in spindle and nuclear envelope formation during mitosis
carbohydrate-binding module family 48 protein
chromatin-remodeling complex ATPase-like protein
carbohydrate-binding module family 50 protein
hypothetical protein with predicted signal peptide