Solidesulfovibrio magneticus RS-1 plasmid pDMC1, complete sequence.
type: Entry
definition: Solidesulfovibrio magneticus RS-1 plasmid pDMC1, complete sequence.
sequence version: NC_012797.1
sequence date: 2022-12-12
sequence: sequence
division: CON
label: NC_012797.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMD00060954
keyword: RefSeq
source: Solidesulfovibrio magneticus RS-1
organism: Solidesulfovibrio magneticus RS-1
taxonomy: Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Solidesulfovibrio.
reference: 1
references: 19675025
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nAP010905.1.\n'Arakaki, A., Tsuruyama, A., Okamura, Y., Takeyama, H. and\nMatsunaga, T. are at Department of Biotechnology, Tokyo University\nof Agriculture and Technology. The other authors are at NITE\nBioresource Information Center (NBIC).\n\nPlease visit our web site. URL:http://www.bio.nite.go.jp/\n\nDOGAN ; Database of Genomes Analyzed at NITE. The database contains\ngenome sequence data, physical maps and the genomic and proteomic\ndata of the microorganisms analyzed.\nURL:http://www.bio.nite.go.jp/dogan/Top\n\nThe microbial strain and microbial genomic DNA clones used for the\nsequencing project are available through the NBRC.\nURL:http://www.nbrc.nite.go.jp/e/index.html.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 12/12/2022 13:45:55\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.3\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 4,706\nCDSs (total) :: 4,638\nGenes (coding) :: 4,596\nCDSs (with protein) :: 4,596\nGenes (RNA) :: 68\nrRNAs :: 3, 3, 3 (5S, 16S, 23S)\ncomplete rRNAs :: 3, 3, 3 (5S, 16S, 23S)\ntRNAs :: 54\nncRNAs :: 5\nPseudo Genes (total) :: 42\nCDSs (without protein) :: 42\nPseudo Genes (ambiguous residues) :: 0 of 42\nPseudo Genes (frameshifted) :: 8 of 42\nPseudo Genes (incomplete) :: 36 of 42\nPseudo Genes (internal stop) :: 3 of 42\nPseudo Genes (multiple problems) :: 5 of 42\nCRISPR Arrays :: 2\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 58704
topology: circular
so has quality: SO_0000988
location: 1..58704
location: region:1-58704:1
RO_0002162: 573370

NC_012797
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMD00060954
type: BioSample
SIO_000068: biosample

1
title: Whole genome sequence of Desulfovibrio magneticus strain RS-1 revealed common gene clusters in magnetotactic bacteria
author: Nakazawa, H.
author: Arakaki, A.
author: Narita-Yamada, S.
author: Yashiro, I.
author: Jinno, K.
author: Aoki, N.
author: Tsuruyama, A.
author: Okamura, Y.
author: Tanikawa, S.
author: Fujita, N.
author: Takeyama, H.
author: Matsunaga, T.
journal: Genome Res
volume: 19
issue: 10
pages: 1801-1808
year: 2009
pubmed: 19675025

19675025
type: PubMed
SIO_000068: pubmed

2
title: Direct Submission
author: Nakazawa, H.
author: Narita-Yamada, S.
author: Yashiro, I.
author: Jinno, K.
author: Aoki, N.
author: Tsuruyama, A.
author: Arakaki, A.
author: Okamura, Y.
author: Tanikawa, S.
author: Fujita, N.
author: Takeyama, H.
author: Matsunaga, T.
journal: Submitted (03-OCT-2008) Contact:Director-General Department of Biotechnology National Institute of Technology and Evaluation, NITE Bioresource Information Center (NBIC), Department of Biotechnology; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066, Japan URL :http://www.bio.nite.go.jp/

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:58704:1
position: 58704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-58704:1:source
so part of: sequence
organism: Solidesulfovibrio magneticus RS-1
mol type: genomic DNA
strain: RS-1
type material: type strain of Desulfovibrio magneticus
plasmid: pDMC1

573370
type: Taxonomy
SIO_000068: taxonomy

DMR_RS21875
type: Gene
subclass of: SO_0000704
RO_0002162: 573370
locus tag: DMR_RS21875
old locus tag: DMR_p1_00010
so part of: sequence
location: 41..826
location: region:41-826:1
so has part: feature:41-826:1:exon
subclass of: SO_0000010

position:41:1
position: 41
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:826:1
position: 826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41-826:1:exon

DMR_RS21875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573370
locus tag: DMR_RS21875
old locus tag: DMR_p1_00010
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009182986.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MGIILAVSNNKGGVGKSTTTANLAHALSARKKRVLIVDADSQCNLTSTFLGSPWGGNSLLELLDGDGVPAEACIIPAPDYERLHVLPNKTDSAALEPALARREDYGWYMLRDRLRLHAAKTFDFTLIDCPPNLGLFSIQAMIASDFILVPVEAGSRYAMDGLDRTIETIGGIAQADPDNPSGRFLRLLINKADRRTAVSKVTIEQIQQSYPGRVFSTIIPVNTDIQQSEMLSKTVLRHASKSPGAQAYRSLATELLGILSQ
SIO_010081: DMR_RS21875
subclass of: SO_0000673
so part of: DMR_RS21875
location: 41..826
location: region:41-826:1
so has part: feature:41-826:1:exon

WP_012750603.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41-826:1:exon

DMR_RS21880
type: Gene
subclass of: SO_0000704
RO_0002162: 573370
locus tag: DMR_RS21880
old locus tag: DMR_p1_00020
so part of: sequence
location: 842..2155
location: region:842-2155:1
so has part: feature:842-2155:1:exon
subclass of: SO_0000010

position:842:1
position: 842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2155:1
position: 2155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:842-2155:1:exon

DMR_RS21880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573370
locus tag: DMR_RS21880
old locus tag: DMR_p1_00020
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MATSMTQLLRKAAKSRMAGQPPAAAAAPEGRREVFADAAPHIEQTNLADKALIKTNQTNPTDEIDSLFQQLKPTVELVRVVQPLAPTAEQTKQADKISGQTDTPSTQIKQYKPTNKSSIESQQPKQALKVDSQKEQTKQTEKPSGLAAPAMRLPPRLPIATMAQKTLATHFLETGPVVTTYAVIAAETGVPLGTARTIIDKFVAAGWLRKEQWGAGRNRALSLAPTEALAAVTRDSQADKVYIQSQQTKQPYKPRGRDQQSSSAVEFNSENAPLKIERKNLSISSETVRTSWPCLARAGFGLAQLEQIHDALAQLGKSADRIIQGLDHAEWELAEGKMLDKAGQPVADPCAWVFRSLASKGYYRRPAGYVSAEEQAELDAANEAKALAQSREQARLARFRAWEQGLSREAREKALEDRRGPEESWLKNFWIKLGEPT
SIO_010081: DMR_RS21880
subclass of: SO_0000673
so part of: DMR_RS21880
location: 842..2155
location: region:842-2155:1
so has part: feature:842-2155:1:exon

WP_012750604.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:842-2155:1:exon

DMR_RS21885
type: Gene
subclass of: SO_0000704
RO_0002162: 573370
locus tag: DMR_RS21885
old locus tag: DMR_p1_00030
so part of: sequence
location: 2351..3841
location: region:2351-3841:1
so has part: feature:2351-3841:1:exon
subclass of: SO_0000010

position:2351:1
position: 2351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3841:1
position: 3841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2351-3841:1:exon

DMR_RS21885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573370
locus tag: DMR_RS21885
old locus tag: DMR_p1_00030
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKIVLSSAVAIVAFIYFFLITQTLLWYMFDVDINDNIPTAIDYLQYWKEVYNFRECADKTGYFGHEELLATIIKWGIDCQGASHGILNPIFYSFFSWGNWQYDTPIYSNLVFTALGIGLYNLLASPSLRQFGRAFLVFLSLYPIYLLNSYNSFQSVHILIACIVSGLVARLVETDTPKVRRRLWLGLLAAVGVGAFLRNNWALFLPALVVLPDVSSRRRWAIIICSLAGAALLGFAFDATRSPYPYPEFSEDLRPYVMPALAKGDFSILWKQIGINLQTLIAFVGKGDFDTIYGLFLLAAATALCLGLPPSGRGQRLSLFGLSILGVSVVSAAALYYVFQVMLLKIVLQGFLIVVLASVRYIDSRRLAFFLIVNILFLPSFLERFRKVGEEYLYAPEKRLAIETFRAQTASYFQNISSDRWKNTVLIFSYTPQLLGLPPCVNVMDTWESFLRERDYRVRTGFALVMDPAIEKRLLEQNNLRLLTTTEVGRLYAVD
SIO_010081: DMR_RS21885
subclass of: SO_0000673
so part of: DMR_RS21885
location: 2351..3841
location: region:2351-3841:1
so has part: feature:2351-3841:1:exon

WP_012750605.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2351-3841:1:exon

DMR_RS24820
type: Gene
subclass of: SO_0000704
RO_0002162: 573370
locus tag: DMR_RS24820
so part of: sequence
location: 3828..4409
location: region:3828-4409:1
so has part: feature:3828-4409:1:exon
subclass of: SO_0000010

position:3828:1
position: 3828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4409:1
position: 4409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3828-4409:1:exon

DMR_RS24820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573370
locus tag: DMR_RS24820
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPWIDSSRLAWKRLCVGGMACLLLGIALAAYGWRPSRIWRTADCLMTRHAALWPHHRFEGFFKTTTVEQAVAIQAMENCELRLGDDQIPYVTPRDPGKLALLHVRIRKDFDEYVFFPRVSKNSEVLVCEDNILNVLFRLKGEEDWTPIGRRYLLDLSCCEHGEEPRQFSVNLVIVLRGPWAQVWLPGEKAFFR
SIO_010081: DMR_RS24820
subclass of: SO_0000673
so part of: DMR_RS24820
location: 3828..4409
location: region:3828-4409:1
so has part: feature:3828-4409:1:exon

WP_043602375.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3828-4409:1:exon

DMR_RS21895
type: Gene
subclass of: SO_0000704
RO_0002162: 573370
locus tag: DMR_RS21895
old locus tag: DMR_p1_00050
so part of: sequence
location: complement(4570..5319)
location: region:4570-5319:-1
so has part: feature:4570-5319:-1:exon
subclass of: SO_0000010

position:4570:-1
position: 4570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5319:-1
position: 5319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4570-5319:-1:exon

DMR_RS21895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573370
locus tag: DMR_RS21895
old locus tag: DMR_p1_00050
inference: COORDINATES: protein motif:HMM:NF013752.2
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MALIRKAKAELEAQAQERTKEQEAAQKAREREEQKTGKKKRGPKPKTINQEVDSEAKANLTDPESRIMKTRKGFIQGYNAQTVVSQDQVIIACDVVSECNDFGQLKPMVELAEANLYEIGEEPDKILADAGYCSQANLEYMDQPGSADPYIAVKKDHKQRCENVAAPRGRIPKDMSLKERMERKLRTKVGKALYRLRGQIAEAPYGQIKDCRNLAKFLLRGLEKVGGEFDLWCLTHNILKLYRHILVAT
SIO_010081: DMR_RS21895
subclass of: SO_0000673
so part of: DMR_RS21895
location: complement(4570..5319)
location: region:4570-5319:-1
so has part: feature:4570-5319:-1:exon

WP_012750607.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4570-5319:-1:exon

DMR_RS21900
type: Gene
subclass of: SO_0000704
RO_0002162: 573370
locus tag: DMR_RS21900
old locus tag: DMR_p1_00060
so part of: sequence
location: complement(5337..5828)
location: region:5337-5828:-1
so has part: feature:5337-5828:-1:exon
subclass of: SO_0000010

position:5337:-1
position: 5337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5828:-1
position: 5828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5337-5828:-1:exon

DMR_RS21900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573370
locus tag: DMR_RS21900
old locus tag: DMR_p1_00060
inference: COORDINATES: protein motif:HMM:NF015038.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MIKALVPPEKRTGFGPRLSANIAELCGIHGDSRRAVQDYLLSVFGLPISQGGIQKVIDRVSQAIKPHYDSIAKVARSAPVGHVDETSWRRKAKLVWLWVLASSRAALFMIHPRRSKAAFEELVQGWSGILVADGYAVYRQWVGLRQACLAHLIREAEGLASPR
SIO_010081: DMR_RS21900
subclass of: SO_0000673
so part of: DMR_RS21900
location: complement(5337..5828)
location: region:5337-5828:-1
so has part: feature:5337-5828:-1:exon

WP_012750608.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5337-5828:-1:exon

DMR_RS21910
type: Gene
subclass of: SO_0000704
RO_0002162: 573370
gene: tnpB
locus tag: DMR_RS21910
old locus tag: DMR_p1_00080
so part of: sequence
location: 6268..6621
location: region:6268-6621:1
so has part: feature:6268-6621:1:exon
subclass of: SO_0000010

position:6268:1
position: 6268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6621:1
position: 6621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6268-6621:1:exon

DMR_RS21910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573370
gene: tnpB
locus tag: DMR_RS21910
old locus tag: DMR_p1_00080
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012976042.1
note: TnpB, as the term is used for proteins encoded by IS66 family insertion elements, is considered an accessory protein, since TnpC, encoded by a neighboring gene, is a DDE family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS66 family insertion sequence element accessory protein TnpB
translation: MMLPANDVRVYLALGATDMRKAIDGLSILVSQQLTLDPFAGHLFGFCNRSRTIVKLLYWDRNGFCLWQKRLERHVFRWPTHEAEVLSIDSRQLAWLLDGLDPLAVKGHSRLEYSTLF
SIO_010081: DMR_RS21910
subclass of: SO_0000673
so part of: DMR_RS21910
location: 6268..6621
location: region:6268-6621:1
so has part: feature:6268-6621:1:exon

WP_012750610.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6268-6621:1:exon

DMR_RS21915
type: Gene
subclass of: SO_0000704
RO_0002162: 573370
locus tag: DMR_RS21915
old locus tag: DMR_p1_00090
so part of: sequence
location: 6671..7636
location: region:6671-7636:1
so has part: feature:6671-7636:1:exon
subclass of: SO_0000010

position:6671:1
position: 6671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7636:1
position: 7636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6671-7636:1:exon

DMR_RS21915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573370
locus tag: DMR_RS21915
old locus tag: DMR_p1_00090
inference: COORDINATES: protein motif:HMM:NF033517.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS66 family transposase
translation: MDINSLPDDPAVLKSVIADHRTQIAQLEQRLRLLNLIIYGPKSEKTPRTGQEQQLSLFDEAEQTVEEHKPQTFEEACAPAGTRRKRGRRPIPADLPRVEIIHDLPESEKACPCGAELVRIGEEVSEKLDIVPAKIQVIRHIRPKYACRTCEGVEDDGPTVKTAPMPPQIIPQGIVTTGLLAHVAVAKYADALPLYRQEDQFARLGLYISRGTLAGWMIRVAKACEPLIDMIIAEIRSGPIVNMDETTVQVLRELDRANTSKSYMWVAQGGTPGKPVVLFRYHPTRAGSVAAEILGDFKGYLQTDGYTGRCKKLFPAILPRR
SIO_010081: DMR_RS21915
subclass of: SO_0000673
so part of: DMR_RS21915
location: 6671..7636
location: region:6671-7636:1
so has part: feature:6671-7636:1:exon

WP_012750611.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6671-7636:1:exon

DMR_RS21920
type: Gene
subclass of: SO_0000704
RO_0002162: 573370
locus tag: DMR_RS21920
old locus tag: DMR_p1_00100
so part of: sequence
location: complement(7617..8972)
location: region:7617-8972:-1
so has part: feature:7617-8972:-1:exon
subclass of: SO_0000010

position:7617:-1
position: 7617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8972:-1
position: 8972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7617-8972:-1:exon

DMR_RS21920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573370
locus tag: DMR_RS21920
old locus tag: DMR_p1_00100
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015861008.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MGLGRQGDQQGTMYLAWDEIPRSRGHAFYDRLQQTLRKAAFDGFAEKLCKPFYSDKGRPSIPPGRYFRMHLVGYFEGIDSERGIEWRCADSLSLRDFLQLSPKESVPDHSSLSRTRSRLPLATHQEVFTWVLKVLSKDGLVLGGRIGVDASTMEANAALKTIVRRDTGESYRKMLLRMAKESGIDSPTDEDLARMDRKRVGKTLSNKDWQSQVDPEAKIAKMKDGRTHLAYKPEHAVDLDTGAVVAVEVHEADKGDTSTLQKTLKAAQESLRRVTSTPPCPDDPAELVADKGYFSRDVLKDLDGGPWRTRIAEPKRNGLNSWRGDHEARRAVYNNRIRISSMVGKAMGKQRTELVERSFEHTLDRSGGMRRVWLRGRENIQKRYLLHVAGFNLGLLMRVKTGHGTPRGWASAWLALIWPNQHPSMAYLAIVMVVEGRCCGIMPIAVICGGE
SIO_010081: DMR_RS21920
subclass of: SO_0000673
so part of: DMR_RS21920
location: complement(7617..8972)
location: region:7617-8972:-1
so has part: feature:7617-8972:-1:exon

WP_012749714.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7617-8972:-1:exon

DMR_RS21925
type: Gene
subclass of: SO_0000704
RO_0002162: 573370
locus tag: DMR_RS21925
old locus tag: DMR_p1_00110
pseudo: true
so part of: sequence
location: <9038..9673
location: region:9038-9673:1
so has part: feature:9038-9673:1:exon
subclass of: SO_0000010

position:9038:1
position: 9038
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:9673:1
position: 9673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9038-9673:1:exon

DMR_RS21925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573370
locus tag: DMR_RS21925
old locus tag: DMR_p1_00110
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012750623.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS66 family transposase
SIO_010081: DMR_RS21925
subclass of: SO_0000673
so part of: DMR_RS21925
location: <9038..9673
location: region:9038-9673:1
so has part: feature:9038-9673:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9038-9673:1:exon

DMR_RS21930
type: Gene
subclass of: SO_0000704
RO_0002162: 573370
locus tag: DMR_RS21930
old locus tag: DMR_p1_00120
so part of: sequence
location: complement(9712..10137)
location: region:9712-10137:-1
so has part: feature:9712-10137:-1:exon
subclass of: SO_0000010

position:9712:-1
position: 9712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10137:-1
position: 10137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9712-10137:-1:exon

DMR_RS21930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573370
locus tag: DMR_RS21930
old locus tag: DMR_p1_00120
inference: COORDINATES: protein motif:HMM:NF040425.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF6444 domain-containing protein
translation: MASAKLITPEVVRHTPWPMLGFVHELTVENRKLRLEIEALQAKLNQNSANSNKPPSSDSPFKPRAKKTNKTEPRKKRIGVRQQCLRPTEITELHPGPCACGCPDLIDPEPYYIHQHIEIPEPRLDVEHIILYQGRCSVSAQ
SIO_010081: DMR_RS21930
subclass of: SO_0000673
so part of: DMR_RS21930
location: complement(9712..10137)
location: region:9712-10137:-1
so has part: feature:9712-10137:-1:exon

WP_043602377.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9712-10137:-1:exon

DMR_RS24040
type: Gene
subclass of: SO_0000704
RO_0002162: 573370
locus tag: DMR_RS24040
old locus tag: DMR_p1_00130
pseudo: true
so part of: sequence
location: <10437..10827
location: region:10437-10827:1
so has part: feature:10437-10827:1:exon
subclass of: SO_0000010

position:10437:1
position: 10437
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:10827:1
position: 10827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10437-10827:1:exon

DMR_RS24040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573370
locus tag: DMR_RS24040
old locus tag: DMR_p1_00130
inference: COORDINATES: similar to AA sequence:RefSeq:WP_086558308.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: DMR_RS24040
subclass of: SO_0000673
so part of: DMR_RS24040
location: <10437..10827
location: region:10437-10827:1
so has part: feature:10437-10827:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10437-10827:1:exon

DMR_RS24050
type: Gene
subclass of: SO_0000704
RO_0002162: 573370
locus tag: DMR_RS24050
old locus tag: DMR_p1_00150
so part of: sequence
location: 11355..12782
location: region:11355-12782:1
so has part: feature:11355-12782:1:exon
subclass of: SO_0000010

position:11355:1
position: 11355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12782:1
position: 12782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11355-12782:1:exon

DMR_RS24050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573370
locus tag: DMR_RS24050
old locus tag: DMR_p1_00150
inference: COORDINATES: protein motif:HMM:NF015983.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: radical SAM protein
translation: MDAVFVDLEQDIYDRHGIYALSAVLKKHGLSVGYLPVNKENAALRRLQEMRPKYILYSTYSSYFRKYARFDAKIKKNMDCFSVIGGPCITFNPNLLKDTTIDAGCMGEGETALPLLLTGNNKESRNIFLRKDPSPVEFDHFVDLDAMPFPDRDIIYSHDYVRRMNPSKTFISGRGCPFSCTYCFNHRYNKLFKNSGHVLRKKSVDYILEEIRLVRGKYPLKLVIFIDDTFILNKKWLFEFCERFPRELGVPYSCNIRANLMNEDVAKALSESGCVMVNWSIESGNDFFRNTVMKRNMTREQILNTAHLLNKYKINHRIGNVIGLPGEKLEQIFETLELNIAANPTLALANIFVPFPGLEMTRYAQENGYFSEIPEEKLPLNYFSKSVMNIPPDANETIQKIMCLFPVFSSVPAIYKSPNLKKIALGLPKPVLRLIYEIFYVAIFRSIYRMHGGICYTTVTGFRYLKSLIRSLLVE
SIO_010081: DMR_RS24050
subclass of: SO_0000673
so part of: DMR_RS24050
location: 11355..12782
location: region:11355-12782:1
so has part: feature:11355-12782:1:exon

WP_148208554.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11355-12782:1:exon

DMR_RS24055
type: Gene
subclass of: SO_0000704
RO_0002162: 573370
locus tag: DMR_RS24055
old locus tag: DMR_p1_00160
so part of: sequence
location: 12864..14246
location: region:12864-14246:1
so has part: feature:12864-14246:1:exon
subclass of: SO_0000010

position:12864:1
position: 12864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14246:1
position: 14246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12864-14246:1:exon

DMR_RS24055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573370
locus tag: DMR_RS24055
old locus tag: DMR_p1_00160
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVLADKKSCQRYASQRLLLILIIVSTVFFCFWSGKENIYRRDDFALEKERTVFVGDSFDFFLHFISISRTRIHASGDTFLFRPGTHLSIYVQHFLVKNKLVVGLSSIFIASVISILIFIILQSVLGLPAFISAYATLLFILDPLSMDIILWRQISPYMCAVLFFCLGVVYCEFSKKKSIWVFSFMLFLSTLFHEYVAITVLFMVVYLVALRFFLNFKNDHSSSFKNFFPTKLIFSILLGVFFIWAGLNIFEYFHYGHTIKSFVSDNGSDKWGLLNSRLDFIINSVKNIFVYAGATLEAAFAPLAVTVSPSNSLSFSWKFSNQPFMLKILFSTLSMLFFVINLIAVTIDILRERQLSLKNFMLLYCMLSLLVCIIFLVLGRGMLRGIDYIEDATYYYFFTSFSWYILAAYSLQEFSRYIKKNFNQLRGFEILSIFNPRYGLCVYLGIYIQTLRLMVNSMYK
SIO_010081: DMR_RS24055
subclass of: SO_0000673
so part of: DMR_RS24055
location: 12864..14246
location: region:12864-14246:1
so has part: feature:12864-14246:1:exon

WP_148208555.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12864-14246:1:exon

DMR_RS24060
type: Gene
subclass of: SO_0000704
RO_0002162: 573370
locus tag: DMR_RS24060
old locus tag: DMR_p1_00170
so part of: sequence
location: 14409..16916
location: region:14409-16916:1
so has part: feature:14409-16916:1:exon
subclass of: SO_0000010

position:14409:1
position: 14409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16916:1
position: 16916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14409-16916:1:exon

DMR_RS24060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573370
locus tag: DMR_RS24060
old locus tag: DMR_p1_00170
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTFFYAVAFNLWLTFSGRICIGHDTWQYFSLQYYFLGNAAYFGEIPQWLPHLGLGTEGSMWYATQGGFVTNILLFIAPLLKNIDFRVIFNTGILFQEIILIVGSWLLCRRFLKSPITIFIVTISLLNSSVWATQYWFNFSFLLALPLSLYVGHCFLETAKYRYLFLLFSLIALQTQGNLPYFIVVFTLIITVYFILYAFLYKNEFFCFFSLVKVNWRLFAATVGVVLLLILVYKTSKLGMHWTAVPSRDGSDASVSLHEYLTWGNAFHLSDYLAAFVRTSFSLDWTFYFGYLPIIGFFFAFKSKPSRSALLFSSVTIFIFLTSLGACVSTVLYYLWPFMSMYRHLSLINILNKVFILILAGIGIDGLLFNRLSINKTACRIKLICVGIVSLVINICIIINLTPELLDNWSCQNIFGLAKEFASIWTSEHYICHNLLNVLKVSPLIIEGVVFCMCTLFLVYMVLTSQPKNKQLYILLTLFVFCLDSCGYRVNQYKKFTFIPEKHLNSAFRLESPFFVRQWWMGEGGAPLLPLGDKEKLRKEIFETIPLNSSKKQWISELFLQSELINKDLKIVHYSKSLYDFYKLYFSKKEKDSGKTLYALLAETPPLLRVIGASIVDRIQFYQNPLFLYSLEDVSKKLQEKRFSGEGLFLFSKDKSETLADDHMRRIDIDYEILKFSANNIVIQCSSSVPKNTYLYYADGWHPWWKADVNGHPAKIYQANIAFKAVALDPGVNVVSFNFNAPNMDIIHFIWFAMSFFWVLYLFYLCKDFVRFGVILLVSTKYKFKFILLFIVLLLCVSSFCVYFVDCDVTSVFEELLFIFLLFLILKKSVACNET
SIO_010081: DMR_RS24060
subclass of: SO_0000673
so part of: DMR_RS24060
location: 14409..16916
location: region:14409-16916:1
so has part: feature:14409-16916:1:exon

WP_148208556.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14409-16916:1:exon

DMR_RS22710
type: Gene
subclass of: SO_0000704
RO_0002162: 573370
locus tag: DMR_RS22710
old locus tag: DMR_p1_00180
so part of: sequence
location: complement(17232..17699)
location: region:17232-17699:-1
so has part: feature:17232-17699:-1:exon
subclass of: SO_0000010

position:17232:-1
position: 17232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17699:-1
position: 17699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17232-17699:-1:exon

DMR_RS22710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573370
locus tag: DMR_RS22710
old locus tag: DMR_p1_00180
inference: COORDINATES: protein motif:HMM:NF013752.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MVSECNDFGQLKPMVELAEANLYEIGEEPDKILADAGYCSQANLEYMDQPGSADPYIAVKKDHKQRCENVAAPRGRIPKDMSLKERMERKLRTKVGKALYRLRGQIAEAPYGQIKDCRNLAKFLLRGLEKVGGEFDLWCLTHNILKLYRHSLVVT
SIO_010081: DMR_RS22710
subclass of: SO_0000673
so part of: DMR_RS22710
location: complement(17232..17699)
location: region:17232-17699:-1
so has part: feature:17232-17699:-1:exon

WP_012750619.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17232-17699:-1:exon

DMR_RS22715
type: Gene
subclass of: SO_0000704
RO_0002162: 573370
locus tag: DMR_RS22715
old locus tag: DMR_p1_00190
so part of: sequence
location: complement(17718..17981)
location: region:17718-17981:-1
so has part: feature:17718-17981:-1:exon
subclass of: SO_0000010

position:17718:-1
position: 17718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17981:-1
position: 17981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17718-17981:-1:exon

DMR_RS22715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573370
locus tag: DMR_RS22715
old locus tag: DMR_p1_00190
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MALIRKAKAELEAQAQERTKEQEAAQKAREREEQKTGKNKRGPKPKAINQEVDSEAKANLTDPESRIMKTRKGFIQGYNAQTVVSQD
SIO_010081: DMR_RS22715
subclass of: SO_0000673
so part of: DMR_RS22715
location: complement(17718..17981)
location: region:17718-17981:-1
so has part: feature:17718-17981:-1:exon

WP_052279082.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17718-17981:-1:exon

DMR_RS21945
type: Gene
subclass of: SO_0000704
RO_0002162: 573370
locus tag: DMR_RS21945
old locus tag: DMR_p1_00200
so part of: sequence
location: 18075..18425
location: region:18075-18425:1
so has part: feature:18075-18425:1:exon
subclass of: SO_0000010

position:18075:1
position: 18075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18425:1
position: 18425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18075-18425:1:exon

DMR_RS21945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573370
locus tag: DMR_RS21945
old locus tag: DMR_p1_00200
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015861631.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MATSAAEGCSEKAACWTEHIAAWHKSGLSQGAYCRRHGLSQSSLSYWRKRLGATDDVGVASFVTIVPVPLLASAQADMATASEPLLVHVGDGFRIEIRGDFAAPVLEKLVRTLTRL
SIO_010081: DMR_RS21945
subclass of: SO_0000673
so part of: DMR_RS21945
location: 18075..18425
location: region:18075-18425:1
so has part: feature:18075-18425:1:exon

WP_012750621.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18075-18425:1:exon

DMR_RS21950
type: Gene
subclass of: SO_0000704
RO_0002162: 573370
gene: tnpB
locus tag: DMR_RS21950
old locus tag: DMR_p1_00210
so part of: sequence
location: 18425..18775
location: region:18425-18775:1
so has part: feature:18425-18775:1:exon
subclass of: SO_0000010

position:18775:1
position: 18775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18425-18775:1:exon

DMR_RS21950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573370
gene: tnpB
locus tag: DMR_RS21950
old locus tag: DMR_p1_00210
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012976048.1
note: TnpB, as the term is used for proteins encoded by IS66 family insertion elements, is considered an accessory protein, since TnpC, encoded by a neighboring gene, is a DDE family transposase.; TnpB, as the term is used for proteins encoded by IS66 family insertion elements, is considered an accessory protein, since TnpC, encoded by a neighboring gene, is a DDE family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS66 family insertion sequence element accessory protein TnpB
translation: MSPVSGIRVYLALGATDMRKSIDGLSILVSRQLQLDPFAGHLFGFCNRSRTIIKLLYWDRNGFCLWHKRLERHVFRWPTREAEVLAIDSRQLAWLLDGLDPLAVTGHSRLEYSTLF
SIO_010081: DMR_RS21950
subclass of: SO_0000673
so part of: DMR_RS21950
location: 18425..18775
location: region:18425-18775:1
so has part: feature:18425-18775:1:exon

WP_268741137.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18425-18775:1:exon

DMR_RS21955
type: Gene
subclass of: SO_0000704
RO_0002162: 573370
locus tag: DMR_RS21955
old locus tag: DMR_p1_00220
so part of: sequence
location: 18882..20396
location: region:18882-20396:1
so has part: feature:18882-20396:1:exon
subclass of: SO_0000010

position:18882:1
position: 18882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20396:1
position: 20396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18882-20396:1:exon

DMR_RS21955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573370
locus tag: DMR_RS21955
old locus tag: DMR_p1_00220
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012750623.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS66 family transposase
translation: MAASQADQQQHVAQLEQRLRLLNLIIYGPKSEKKPRTGQEQQLSLFDEAEQAVEEQKPQTFEEACAPASTRRKRGRRPIPADLPRVEISHDLPESEKVCPCGAELVCIGEEVSEKLDIVPAKIQVIRHIRPKYACRACEGVEADGPTVKTVSMPPQIIIQGIVTPGLLAHVAVAKYADALPLYRQEDQFARLGLDISRGTLAGWMIRVAKACEPLIDMIIAEIRSGPIVNMDETTVQVLAEPGRANTTKSFMWVARGGTPGKLVVLFRYHPSRAGNVAAEILGDFKGYLQTDGYSGYEALGEREGLRHLGCMAHVRRKFVEVEKTAGKKGKGGTAHAALDLIGKLYDVERQAEKQRLKPEQITALRAEKSRPILDKLKALLDARVASTPPKSLLGKAIGYAIKQWERLVVYLEDGRLRPDNNLAENAIRPFAVGRKNWLFSGHPRGADASAAIYSLIETAKANGLEPYRYLRHLFEHLPAATTHAQRKALLPQHLDPCSLIIPA
SIO_010081: DMR_RS21955
subclass of: SO_0000673
so part of: DMR_RS21955
location: 18882..20396
location: region:18882-20396:1
so has part: feature:18882-20396:1:exon

WP_232502949.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18882-20396:1:exon

DMR_RS24065
type: Gene
subclass of: SO_0000704
RO_0002162: 573370
locus tag: DMR_RS24065
pseudo: true
so part of: sequence
location: <20900..21298
location: region:20900-21298:1
so has part: feature:20900-21298:1:exon
subclass of: SO_0000010

position:20900:1
position: 20900
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:21298:1
position: 21298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20900-21298:1:exon

DMR_RS24065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573370
locus tag: DMR_RS24065
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009106255.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: DMR_RS24065
subclass of: SO_0000673
so part of: DMR_RS24065
location: <20900..21298
location: region:20900-21298:1
so has part: feature:20900-21298:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:20900-21298:1:exon

DMR_RS21965
type: Gene
subclass of: SO_0000704
RO_0002162: 573370
locus tag: DMR_RS21965
so part of: sequence
location: complement(21292..21633)
location: region:21292-21633:-1
so has part: feature:21292-21633:-1:exon
subclass of: SO_0000010

position:21292:-1
position: 21292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21633:-1
position: 21633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21292-21633:-1:exon

DMR_RS21965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573370
locus tag: DMR_RS21965
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAESYRKRRTPTAKLTYWREQVAAWRESGLSRTAYCRRAGVSASSLGHWVRRLAREQGNRDAVPVVVAVAPQQLASALLDVRPGRVPLRLHVGERFQVDIAEDWFFDVSNGIH
SIO_010081: DMR_RS21965
subclass of: SO_0000673
so part of: DMR_RS21965
location: complement(21292..21633)
location: region:21292-21633:-1
so has part: feature:21292-21633:-1:exon

WP_043602382.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21292-21633:-1:exon

DMR_RS24070
type: Gene
subclass of: SO_0000704
RO_0002162: 573370
locus tag: DMR_RS24070
old locus tag: DMR_p1_00240
so part of: sequence
location: 21954..22436
location: region:21954-22436:1
so has part: feature:21954-22436:1:exon
subclass of: SO_0000010

position:21954:1
position: 21954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22436:1
position: 22436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21954-22436:1:exon

DMR_RS24070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573370
locus tag: DMR_RS24070
old locus tag: DMR_p1_00240
inference: COORDINATES: protein motif:HMM:NF020893.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VTT domain-containing protein
translation: MVYPAPNRLYTRIFLVLYAGLVLAMVPTLTLNLAGGFHWGGGGLLSAFGASLGSFIAFFVTRYAFGDILEKYFANALVDRTQRDLAKNSWQCVAFLRVNPAIPTGPLNYFLGLTAVDPCAYLFFTAVFSTPPSTIVVWIGLETYPLLCKAHQPHFGAVSF
SIO_010081: DMR_RS24070
subclass of: SO_0000673
so part of: DMR_RS24070
location: 21954..22436
location: region:21954-22436:1
so has part: feature:21954-22436:1:exon

WP_148208557.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21954-22436:1:exon

DMR_RS21970
type: Gene
subclass of: SO_0000704
RO_0002162: 573370
locus tag: DMR_RS21970
old locus tag: DMR_p1_00250
so part of: sequence
location: 22514..23233
location: region:22514-23233:1
so has part: feature:22514-23233:1:exon
subclass of: SO_0000010

position:22514:1
position: 22514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23233:1
position: 23233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22514-23233:1:exon

DMR_RS21970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573370
locus tag: DMR_RS21970
old locus tag: DMR_p1_00250
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013513047.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase family 2 protein
translation: MTVTILALTLNEIVGVKAILPQIDPAWYNQLIVVDGGSTDGTIEWCRENGYEVYVQKRKGIRFAYLEVMSHITGDVILTLSPDGNCEPTVIPLILEKMTHGYDLVIGSRYLDDATSSDDDLVTGFGNWLFTRTVNLLHHASYTDCMVIYRAFTKQLVYDLQLEQEDCYLLPEKLFKTVISWEPLMAVRAAKAKMKICEVAAGEPERLGGERKLQIFRWGAAYYFQFWRELWFWKPRSSK
SIO_010081: DMR_RS21970
subclass of: SO_0000673
so part of: DMR_RS21970
location: 22514..23233
location: region:22514-23233:1
so has part: feature:22514-23233:1:exon

WP_012750626.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22514-23233:1:exon

DMR_RS21975
type: Gene
subclass of: SO_0000704
RO_0002162: 573370
locus tag: DMR_RS21975
old locus tag: DMR_p1_00260
so part of: sequence
location: 23314..24345
location: region:23314-24345:1
so has part: feature:23314-24345:1:exon
subclass of: SO_0000010

position:23314:1
position: 23314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24345:1
position: 24345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23314-24345:1:exon

DMR_RS21975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573370
locus tag: DMR_RS21975
old locus tag: DMR_p1_00260
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013329333.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase family 2 protein
translation: MITKRPTLPYVSVVLSFYNEECVLPELLRRLRAVFREEIARESVRGYELIFVDDASTDNSAAVLNEEYRIHDDVVIVTMSRNFGVSECVLAGMEQAKGELVVYMDADLQDPPEVIPRLLDAWHADPEVEVVYTTRRSRAGEHPLKLLITKWGYRLINSISSIALPVDSGDFKLLSRRVVDELLHLGEVKPYLRALVSWVGFKQIPVYYDREPRLDGAAKTKCPVLSRKVIWGYFDRALISFSDAPLKLCLFLGFSVSFMALLYILVVLVQKVLGWYVPGWPALMAAILLIGGVQLLMIGFIGLYINIIYLESRRRPRYIINRVDAKDNRAKPTDHGRRRRDIA
SIO_010081: DMR_RS21975
subclass of: SO_0000673
so part of: DMR_RS21975
location: 23314..24345
location: region:23314-24345:1
so has part: feature:23314-24345:1:exon

WP_012750627.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23314-24345:1:exon

DMR_RS21980
type: Gene
subclass of: SO_0000704
RO_0002162: 573370
locus tag: DMR_RS21980
old locus tag: DMR_p1_00270
so part of: sequence
location: 24342..25847
location: region:24342-25847:1
so has part: feature:24342-25847:1:exon
subclass of: SO_0000010

position:24342:1
position: 24342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25847:1
position: 25847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24342-25847:1:exon

DMR_RS21980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573370
locus tag: DMR_RS21980
old locus tag: DMR_p1_00270
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013513046.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: radical SAM protein
translation: MTRIDIVLLKPGSQKLLYGDLSDFELTAIEPPFWAALLAAYLRGKGFSVALFDAEAEGWTHEQAAAALAEAEPRLAVLVASGTNPSASTMNMQGAGALLARVKELSPDTATMLSGLHPSALPEKTLLEEKPDFVCQGEGFYTLPPLLEALAGSSEIPAIDGLWRLASDGSVVPGVRPAVFADLDALPMPAWDLLPMDRYRAHNWHCFNDITRRQPYAVLSTSLGCPYHCTFCCINALFGRPGLRTRSTASVLQEIDWLVSTHGVRNIKILDEMFAINEKRVVELCDAIAERGYDLNIWAYARVNTVTPPMIESMKRAGVNWLAYGFETASRRVLAANAKGYDPAKVDAVVDLTRRAGIYICANFIFGLPEDDYDSMQETLARMQEINAEWANIYSAMAFPGSKLYEQALAKDWPLPETWRGYSQYAPECRPLPTNYLTGGQVLAFRDYAFDAYYRNPRYLDMIRRTFGLPTVRHVMKMSAKSLRRDFAEPYGGFRTDEAAS
SIO_010081: DMR_RS21980
subclass of: SO_0000673
so part of: DMR_RS21980
location: 24342..25847
location: region:24342-25847:1
so has part: feature:24342-25847:1:exon

WP_012750628.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24342-25847:1:exon

DMR_RS21985
type: Gene
subclass of: SO_0000704
RO_0002162: 573370
locus tag: DMR_RS21985
old locus tag: DMR_p1_00280
so part of: sequence
location: 25844..26323
location: region:25844-26323:1
so has part: feature:25844-26323:1:exon
subclass of: SO_0000010

position:25844:1
position: 25844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26323:1
position: 26323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25844-26323:1:exon

DMR_RS21985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573370
locus tag: DMR_RS21985
old locus tag: DMR_p1_00280
inference: COORDINATES: protein motif:HMM:NF012514.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NUDIX domain-containing protein
translation: MRALAPPTMYAPRRPTEQTTVRLGVGVIILDEAGRLLLERRSDCGWWGLPGGAVDPGESVAEAAMREAFEETGLRLELTGLLGVYSEPAGRIVIYPDNGDERHLVDVLVTARIASGELRSSQESLELCFFDPVDLPDDIVPPARRPLTDFLLGCNNVLR
SIO_010081: DMR_RS21985
subclass of: SO_0000673
so part of: DMR_RS21985
location: 25844..26323
location: region:25844-26323:1
so has part: feature:25844-26323:1:exon

WP_012750629.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25844-26323:1:exon

DMR_RS21990
type: Gene
subclass of: SO_0000704
RO_0002162: 573370
locus tag: DMR_RS21990
old locus tag: DMR_p1_00290
so part of: sequence
location: 26336..27418
location: region:26336-27418:1
so has part: feature:26336-27418:1:exon
subclass of: SO_0000010

position:26336:1
position: 26336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27418:1
position: 27418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26336-27418:1:exon

DMR_RS21990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573370
locus tag: DMR_RS21990
old locus tag: DMR_p1_00290
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006422947.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: kinase
translation: MIISRTPYRISFFGGGTDYPGWYKVHGGQVLSTTIDKYCYITLRYLPPFFEHKIRVVYSKIESVSNIDDIRHPAVREVLRHLNFDRGLEIHHDGDLPARSGMGSSSTFTVGLLNALYALKGVMRSKRQLVEESIYIEQEMIKETVGSQDQTAAACGGLNHIVFHPSGDIEVRPVTLTRDRRQELSDHLMLFYTGIMRTASDVAKSYVEDICQKEALLHRMSAMVDEGVDILQSTRCICRFGELLDAAWQAKRRLSCKVSNDVVDNLMARAKDNGAIGGKIAGAGGGGFMLLFVPPSAQKRVRNALGELLHVPFHIAADGSQIIFYDPAVDDFRHIEDERSRREIQCLRELGTLKSGGGLS
SIO_010081: DMR_RS21990
subclass of: SO_0000673
so part of: DMR_RS21990
location: 26336..27418
location: region:26336-27418:1
so has part: feature:26336-27418:1:exon

WP_012750630.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26336-27418:1:exon

DMR_RS21995
type: Gene
subclass of: SO_0000704
RO_0002162: 573370
locus tag: DMR_RS21995
old locus tag: DMR_p1_00300
so part of: sequence
location: 27415..28383
location: region:27415-28383:1
so has part: feature:27415-28383:1:exon
subclass of: SO_0000010

position:27415:1
position: 27415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28383:1
position: 28383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27415-28383:1:exon

DMR_RS21995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573370
locus tag: DMR_RS21995
old locus tag: DMR_p1_00300
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006965176.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha
translation: MKSETMLALYRSMLRIRRVQERIESLYLQDAMKTPVHLCIGQEAIAAGICLALEPDDSIQSNHRGHGHYLAKGGDLKAMIAELHCKATGCSGGFGGSMHLVDVAAGHLGSSSIVGGGIPIGTGIGLAMRMRRTSQVSVVFFGDGAADEGVLYESLNFAMLKRLSVIFVLEDNRWAVCSPRDSRQTGDNVFLRGADPDRLFTARLDGNDAEIVHETARAAVARGRSGAGPSLLVCDTYRIMGHAGCKAQEPSGYRDACEIDAWSDKCPVALYRAKLASRGILDEPTEAAMEATIAAEITEAFDFAAQSPLPHDGDLHKHLFSE
SIO_010081: DMR_RS21995
subclass of: SO_0000673
so part of: DMR_RS21995
location: 27415..28383
location: region:27415-28383:1
so has part: feature:27415-28383:1:exon

WP_043602384.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27415-28383:1:exon

DMR_RS22000
type: Gene
subclass of: SO_0000704
RO_0002162: 573370
locus tag: DMR_RS22000
old locus tag: DMR_p1_00310
so part of: sequence
location: 28389..29438
location: region:28389-29438:1
so has part: feature:28389-29438:1:exon
subclass of: SO_0000010

position:28389:1
position: 28389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29438:1
position: 29438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28389-29438:1:exon

DMR_RS22000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573370
locus tag: DMR_RS22000
old locus tag: DMR_p1_00310
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006965175.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acetoin dehydrogenase
translation: MPWSQIKPDMDEPDYGRDNGLDGRRVTYAAATREALAQALSLDERVFVMGQGVDDPSGMFGASRGLHLEFGNERVFDTPLAETALTGVAVGAALAGMRPVYMHNRPDFLFLALDQLANHAAKWRFMFGGAAPSVPLVIWACIGRGWGSAAQHSQALQGIFQHIPGLKLVMPSTCHDAKGLMLAAIKDDNPVVIIDHRFNFKNKGIVPEDPYLVPLGKGIVRRPGRDVTVAAFSHLVADAYMAAEELAREDGIEVEVIDPRSIRPLDEELILGSLARTGRLVVADTGWKTGGVTAEVAALAAEKGFASLKAPVARVASPDLPTPAGYTLEAAYYVGKDQIKDAVRRVARA
SIO_010081: DMR_RS22000
subclass of: SO_0000673
so part of: DMR_RS22000
location: 28389..29438
location: region:28389-29438:1
so has part: feature:28389-29438:1:exon

WP_012750632.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28389-29438:1:exon

DMR_RS22005
type: Gene
subclass of: SO_0000704
RO_0002162: 573370
locus tag: DMR_RS22005
old locus tag: DMR_p1_00320
so part of: sequence
location: 29466..30395
location: region:29466-30395:1
so has part: feature:29466-30395:1:exon
subclass of: SO_0000010

position:29466:1
position: 29466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30395:1
position: 30395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29466-30395:1:exon

DMR_RS22005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573370
locus tag: DMR_RS22005
old locus tag: DMR_p1_00320
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013275336.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GDP-L-fucose synthase
translation: MHNDARVFIAGGGKAVCRAIRRALAASGVSQVAGAGDNEPDYADQAAVERFFADFHPEYVFIAGGKAGGIGYNRAHPATLGLDNLLLATHVMDAARRHGVKKLVNLASSCCYPKVCPQPMAEEHLMTGPLEPTNEAYAQAKLAGMALAKAYRQEYGLDYVTAIPTNYFGPGDDFSPENSHVVGALLSRFHAAKHNGDPEVVVWGTGRPRREFLYVDDVASACLAVMDGYSDEAPINIAGGEDLSIAELAAMAGEVVGYQGALRFAVDKPDGMMQKRLDASKLLALGWSPAHDFKTALRHTYQWFCGQSA
SIO_010081: DMR_RS22005
subclass of: SO_0000673
so part of: DMR_RS22005
location: 29466..30395
location: region:29466-30395:1
so has part: feature:29466-30395:1:exon

WP_012750633.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29466-30395:1:exon

DMR_RS22010
type: Gene
subclass of: SO_0000704
RO_0002162: 573370
locus tag: DMR_RS22010
old locus tag: DMR_p1_00330
so part of: sequence
location: 30419..31624
location: region:30419-31624:1
so has part: feature:30419-31624:1:exon
subclass of: SO_0000010

position:30419:1
position: 30419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31624:1
position: 31624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30419-31624:1:exon

DMR_RS22010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573370
locus tag: DMR_RS22010
old locus tag: DMR_p1_00330
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012468880.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DegT/DnrJ/EryC1/StrS family aminotransferase
translation: MSKMKVPFGTISIPPRAKELINEALEIKRVSCGRMVRQFEEGFAKLLGMPHAVAVATGTDADALALALLHDFGATPESEVIIPALSFVATGNAVLHARLTPKFVDIDRKTLNIDVSKIEAAITERTKAIMPVHLMGKPADMDPIMDIAARYNLTVVEDAAEAHGMLYKGKPAGAIGHLGAFSLYVAHIISTIEGGIITCRSEEHAEILISLRSHGRGCSCPSCVLSTTQSYCAKRFRDGQDIRFTFPRVGYSCKMNELEAAVGLANIDVYEDIVATRHANLKYVLDRFERFAPFLSTITEESWEKIGPHAIPVVVNEAASFTRDELASYLEQNGVETRTLFASMPTQCPGFAYLGHQLGEFPVAEYMGHNGFHIGCHHDLGIAEMEYFLHVLDKFLTERQS
SIO_010081: DMR_RS22010
subclass of: SO_0000673
so part of: DMR_RS22010
location: 30419..31624
location: region:30419-31624:1
so has part: feature:30419-31624:1:exon

WP_148208558.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30419-31624:1:exon

DMR_RS22015
type: Gene
subclass of: SO_0000704
RO_0002162: 573370
locus tag: DMR_RS22015
old locus tag: DMR_p1_00340
so part of: sequence
location: 31661..32602
location: region:31661-32602:1
so has part: feature:31661-32602:1:exon
subclass of: SO_0000010

position:31661:1
position: 31661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32602:1
position: 32602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31661-32602:1:exon

DMR_RS22015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573370
locus tag: DMR_RS22015
old locus tag: DMR_p1_00340
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002934348.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD-dependent epimerase/dehydratase
translation: MEKQSILVTGGAGYLGSVMVPALLAQGYKVTVLDSLLFGQDSLLDCCHYDGFDFIKGNIADTALMESLVPKFDVVIPLAAIVGAPACKLNPSLTTMVNHDAYLHLIKILSPSQRVVFPTTNSGYGIGEKDAYCTEESPLRPISEYGLCKVEIEKAFLDKGNAVSFRLATVFGMSPRMRMDLLVNDFTYRAFKDRFIILFEEHFRRNYIHVRDVAKAFLMALEKYDIMKGQAYNVGLSTANLTKRQLCEKIKEHIPDFYIHSAAVGEDPDKRDYIVSNDKIEALGWRPDFDLDRGIRELLIGYRILKPNRYANV
SIO_010081: DMR_RS22015
subclass of: SO_0000673
so part of: DMR_RS22015
location: 31661..32602
location: region:31661-32602:1
so has part: feature:31661-32602:1:exon

WP_012750635.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31661-32602:1:exon

DMR_RS22020
type: Gene
subclass of: SO_0000704
RO_0002162: 573370
locus tag: DMR_RS22020
old locus tag: DMR_p1_00350
so part of: sequence
location: 32589..33320
location: region:32589-33320:1
so has part: feature:32589-33320:1:exon
subclass of: SO_0000010

position:32589:1
position: 32589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33320:1
position: 33320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32589-33320:1:exon

DMR_RS22020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573370
locus tag: DMR_RS22020
old locus tag: DMR_p1_00350
inference: COORDINATES: protein motif:HMM:NF012695.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nucleotidyltransferase family protein
translation: MPTSNSGLAGGPVREAIVLCGGQGTRLRAALPALPKVLAPIAGRPFIAYQLRALARLGIRRVVLATGYLADAVWEALGDAQEGMDLVHSREQTPLDTGGALRLALPSLDGEAALVLNGDSYLDADLSPLVAPLADAPPCLMAAAALADTTRFGRLLFQEDGAVTAFTEKGLSGPGHINAGVYRFTRQTLEALPADRPVSLEREVFPGLIGRGLRAIPLSGAFLDIGTPESYAAAEAFFAAVGP
SIO_010081: DMR_RS22020
subclass of: SO_0000673
so part of: DMR_RS22020
location: 32589..33320
location: region:32589-33320:1
so has part: feature:32589-33320:1:exon

WP_012750636.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32589-33320:1:exon

DMR_RS22025
type: Gene
subclass of: SO_0000704
RO_0002162: 573370
locus tag: DMR_RS22025
old locus tag: DMR_p1_00360
so part of: sequence
location: 33351..33851
location: region:33351-33851:1
so has part: feature:33351-33851:1:exon
subclass of: SO_0000010

position:33351:1
position: 33351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33851:1
position: 33851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33351-33851:1:exon

DMR_RS22025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573370
locus tag: DMR_RS22025
old locus tag: DMR_p1_00360
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MALPAKYVALGLAAVVILAWLWLPQTNAYCRPVDYFAEQQCFFISDGITSPEQDAHGRYCWALGPTAATKCFWGKSGKVRLHIGLRSPFAGQIIALFVNGVAVYCLTKAEAQDGPDQTTLALDVDFKRGVNIIEFQSNFYNNHPTRVLADDRSLSFTLTQLRLEPL
SIO_010081: DMR_RS22025
subclass of: SO_0000673
so part of: DMR_RS22025
location: 33351..33851
location: region:33351-33851:1
so has part: feature:33351-33851:1:exon

WP_012750637.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33351-33851:1:exon

DMR_RS22030
type: Gene
subclass of: SO_0000704
RO_0002162: 573370
locus tag: DMR_RS22030
old locus tag: DMR_p1_00370
so part of: sequence
location: 33881..35407
location: region:33881-35407:1
so has part: feature:33881-35407:1:exon
subclass of: SO_0000010

position:33881:1
position: 33881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35407:1
position: 35407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33881-35407:1:exon

DMR_RS22030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573370
locus tag: DMR_RS22030
old locus tag: DMR_p1_00370
EC number: 2.4.-.-
inference: COORDINATES: protein motif:HMM:NF014425.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase family 39 protein
translation: MTALLLLLAYGLFAWHLASRCPVGIWQTRTAQATMLGGNEDPDGVYLPSAVHLFDARYPQFYLGTPGLTLQYALYGVVKAYYFLGKDFPTQDFVDFAAYHWETVNALARLFMALTHALTGYLVYRLTLVLGLGPRVGLAAAGLYMTSYAVLWYFIKISPESLMTVFFVLTLLLCRQAADNPARTKQAAWGGFFCGLTWLTKVHYLYALPAIMVVQLAMAPKIARKRLIVAFLAAFLGTIALGSQHIEFGKWAEGWRGAIKEHSWSNSDVKTYAAFDMAKPATYFQTLVEKTAHQLAFVTALATLSVQDNGETFPLLATEIALFAVAALGYGLRLRNGKYDLVLLLILCSSVPVLIFRISAHYWFTNFVILSIFAANAICNYLCRPNALAAAVVCVAIIHAPGLFDFIHSKSLDIDHYTKEYAPYYQALQAAGPTRNCGVILHGVPFNPLRLGGFYLVSGLSPETGVVKAFASRFKVIEDASERTRYEAFLGSVVSVHSTGYDILPTCP
SIO_010081: DMR_RS22030
subclass of: SO_0000673
so part of: DMR_RS22030
location: 33881..35407
location: region:33881-35407:1
so has part: feature:33881-35407:1:exon

WP_043602388.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33881-35407:1:exon

DMR_RS22035
type: Gene
subclass of: SO_0000704
RO_0002162: 573370
locus tag: DMR_RS22035
old locus tag: DMR_p1_00380
so part of: sequence
location: 35492..37207
location: region:35492-37207:1
so has part: feature:35492-37207:1:exon
subclass of: SO_0000010

position:35492:1
position: 35492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37207:1
position: 37207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35492-37207:1:exon

DMR_RS22035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573370
locus tag: DMR_RS22035
old locus tag: DMR_p1_00380
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTVSKASSLDAPCPFWTPVVMAALIGAACGLAAATWPVSLENGQALAGRIPFVAESAWNVYLFRLWALINQLTAGLLALGFDGPSVAMIIGGLTGALSFAALSALVLALGGAGPAAVVAPVFIYLYELKGIGFSYPIDLMRTPHIFGIIGFSYVLLVLGVFGVGRRRAAWGLAGLAPAVHPTWGAFCLGMLGLGSLLDAEARSHLRRDLPPLALGLILSAASYALQRRLGGAAFAPAGPIDMGDYQLFLRAHDVHRLRFEPLALDVIFFVFTVAGLCLALVRKLLPPSGAVLGKCLLAGLGTAAALTAAAPLFPEFLPLQMLMAPRFFNLAIILAMPLFFALTTRPAAGLRENALAGLCLVAVWAAGSSDLLRGMAATAALCLSLIFIFRPDRLSSQVNPVQRLLDGLGRCCSPAAALALALFLAVEGYYEAYAIKARFHDASNDSFYALCQNRPGPLLPAAGLLYPQWNIARPVIFYPGGLDLASYFPDLLPGMRRLALSVYGQDILATSPGPRRSSLADHRALWEARSTEDWRELGRRFGFTDILVPADWRLSLPLVGSNCAQALYAVQ
SIO_010081: DMR_RS22035
subclass of: SO_0000673
so part of: DMR_RS22035
location: 35492..37207
location: region:35492-37207:1
so has part: feature:35492-37207:1:exon

WP_012750639.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35492-37207:1:exon

DMR_RS22040
type: Gene
subclass of: SO_0000704
RO_0002162: 573370
locus tag: DMR_RS22040
old locus tag: DMR_p1_00390
so part of: sequence
location: 37194..37745
location: region:37194-37745:1
so has part: feature:37194-37745:1:exon
subclass of: SO_0000010

position:37194:1
position: 37194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37745:1
position: 37745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37194-37745:1:exon

DMR_RS22040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573370
locus tag: DMR_RS22040
old locus tag: DMR_p1_00390
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPSNNPTQRGPRLLLAGGLLVLLVLFALWRRDQALRAVPLPIELTANVALAPGVTLCGFGDLEGLGDPRPYRWGMGPMSQIGFIAPFAGQGVVVLAVSSPCVPDQALAVLANGKTVGTLSGPQALPPGETPGQEMRLRFPIRRGYNTVALRYTDWNHGHQVCSAGDSRRFAVRFSRLAILGAP
SIO_010081: DMR_RS22040
subclass of: SO_0000673
so part of: DMR_RS22040
location: 37194..37745
location: region:37194-37745:1
so has part: feature:37194-37745:1:exon

WP_043602391.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37194-37745:1:exon

DMR_RS22045
type: Gene
subclass of: SO_0000704
RO_0002162: 573370
gene: lhgO
locus tag: DMR_RS22045
old locus tag: DMR_p1_00400
so part of: sequence
location: 37794..38996
location: region:37794-38996:1
so has part: feature:37794-38996:1:exon
subclass of: SO_0000010

position:37794:1
position: 37794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38996:1
position: 38996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37794-38996:1:exon

DMR_RS22045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573370
gene: lhgO
locus tag: DMR_RS22045
old locus tag: DMR_p1_00400
EC number: 1.1.3.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012749796.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: L-2-hydroxyglutarate oxidase
translation: MSQYDFIIAGAGIVGLTTACEILNRAPSAKVAVVEKEATPGRHASGRNSGVLHCGLYYGSDTLKAKVCATGGRAMKAFAYAHGIPWSNNGKVLVATDPSQLPAVDRLMQNAADNAIRAERIDNKTLLELEPAAPPDAVAAIHCPDTAVIDIKAVLETLRTQLAERGARFYFQRRIIGPAPDGALQTSDGPIRGGFLFNCCGAYADVLAKAHGFARQYILVPFKGIYWKLSPQKNPLVRGNIYPVPDISMPFLGVHFTRGISGDVYAGPTAIPALGRENYGILAGAKWGEAATILGRLGLLYLGNQNNFRLLAHTEVRKYSKTFFHQCARRLFPGLAIEDLVPTNKSGIRPQLVNVATKRLEMDYVFEGDKRSLHVLNAISPAFTSSFAFAQMIVDRSGAL
SIO_010081: DMR_RS22045
subclass of: SO_0000673
so part of: DMR_RS22045
location: 37794..38996
location: region:37794-38996:1
so has part: feature:37794-38996:1:exon

WP_012750641.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37794-38996:1:exon

DMR_RS22050
type: Gene
subclass of: SO_0000704
RO_0002162: 573370
locus tag: DMR_RS22050
old locus tag: DMR_p1_00410
so part of: sequence
location: 39040..39663
location: region:39040-39663:1
so has part: feature:39040-39663:1:exon
subclass of: SO_0000010

position:39040:1
position: 39040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39663:1
position: 39663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39040-39663:1:exon

DMR_RS22050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573370
locus tag: DMR_RS22050
old locus tag: DMR_p1_00410
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018526006.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SIS domain-containing protein
translation: MRHLLDRYPALAPLTRELASAGALLERTVRAGGKMLVCGNGGSAADAEHIVGELMKGFCLPRPLTAKQRQTLTEAFPGEGPALADSLQQAIPAVSLVAGVSLPTAFANDVGAVNVFAQQTLGLGRPGDLLWAISTSGNSPNVLAALRVARAFGLSTLGMTGPGGGRMADLCDVLLAVPGESTAAIQELHLPVYHALCETLEQSLFGQ
SIO_010081: DMR_RS22050
subclass of: SO_0000673
so part of: DMR_RS22050
location: 39040..39663
location: region:39040-39663:1
so has part: feature:39040-39663:1:exon

WP_012750642.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39040-39663:1:exon

DMR_RS25525
type: Gene
subclass of: SO_0000704
RO_0002162: 573370
locus tag: DMR_RS25525
pseudo: true
so part of: sequence
location: complement(<40300..>40440)
location: region:40300-40440:-1
so has part: feature:40300-40440:-1:exon
subclass of: SO_0000010

position:40300:-1
position: 40300
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:40440:-1
position: 40440
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40300-40440:-1:exon

DMR_RS25525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573370
locus tag: DMR_RS25525
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012976033.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: Tn3 family transposase
SIO_010081: DMR_RS25525
subclass of: SO_0000673
so part of: DMR_RS25525
location: complement(<40300..>40440)
location: region:40300-40440:-1
so has part: feature:40300-40440:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:40300-40440:-1:exon

DMR_RS25530
type: Gene
subclass of: SO_0000704
RO_0002162: 573370
locus tag: DMR_RS25530
pseudo: true
so part of: sequence
location: complement(<40576..40977)
location: region:40576-40977:-1
so has part: feature:40576-40977:-1:exon
subclass of: SO_0000010

position:40576:-1
position: 40576
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:40977:-1
position: 40977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40576-40977:-1:exon

DMR_RS25530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573370
locus tag: DMR_RS25530
inference: COORDINATES: protein motif:HMM:NF024408.2
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS66 family transposase zinc-finger binding domain-containing protein
SIO_010081: DMR_RS25530
subclass of: SO_0000673
so part of: DMR_RS25530
location: complement(<40576..40977)
location: region:40576-40977:-1
so has part: feature:40576-40977:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:40576-40977:-1:exon

DMR_RS22065
type: Gene
subclass of: SO_0000704
RO_0002162: 573370
gene: tnpB
locus tag: DMR_RS22065
old locus tag: DMR_p1_00430
so part of: sequence
location: complement(41027..41380)
location: region:41027-41380:-1
so has part: feature:41027-41380:-1:exon
subclass of: SO_0000010

position:41027:-1
position: 41027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41380:-1
position: 41380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41027-41380:-1:exon

DMR_RS22065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573370
gene: tnpB
locus tag: DMR_RS22065
old locus tag: DMR_p1_00430
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012976042.1
note: TnpB, as the term is used for proteins encoded by IS66 family insertion elements, is considered an accessory protein, since TnpC, encoded by a neighboring gene, is a DDE family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS66 family insertion sequence element accessory protein TnpB
translation: MMLPANDVRVYLALGATDMRKAIDGLSILVSQQLTLDPFAGHLFGFCNRSRTIVKLLYWDRNGFCLWQKRLERHVFRWPTHEAEVLSIDSRQLAWLLDGLDPLAVKGHSRLEYSTLF
SIO_010081: DMR_RS22065
subclass of: SO_0000673
so part of: DMR_RS22065
location: complement(41027..41380)
location: region:41027-41380:-1
so has part: feature:41027-41380:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:41027-41380:-1:exon

DMR_RS22075
type: Gene
subclass of: SO_0000704
RO_0002162: 573370
locus tag: DMR_RS22075
old locus tag: DMR_p1_00450
so part of: sequence
location: complement(41702..41932)
location: region:41702-41932:-1
so has part: feature:41702-41932:-1:exon
subclass of: SO_0000010

position:41702:-1
position: 41702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41932:-1
position: 41932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41702-41932:-1:exon

DMR_RS22075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573370
locus tag: DMR_RS22075
old locus tag: DMR_p1_00450
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSSAILHDALARLDDLDKTLSTLRLLADAYVEDGSGGDHVAEYFRNRQKKSFLRLLSFLAWNVPRRDAHGSISNGA
SIO_010081: DMR_RS22075
subclass of: SO_0000673
so part of: DMR_RS22075
location: complement(41702..41932)
location: region:41702-41932:-1
so has part: feature:41702-41932:-1:exon

WP_012750644.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41702-41932:-1:exon

DMR_RS22080
type: Gene
subclass of: SO_0000704
RO_0002162: 573370
locus tag: DMR_RS22080
old locus tag: DMR_p1_00460
so part of: sequence
location: complement(41925..42194)
location: region:41925-42194:-1
so has part: feature:41925-42194:-1:exon
subclass of: SO_0000010

position:41925:-1
position: 41925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42194:-1
position: 42194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41925-42194:-1:exon

DMR_RS22080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573370
locus tag: DMR_RS22080
old locus tag: DMR_p1_00460
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAAEQVHVDALAGKLPQIRDDLIQALKFAETDANQMAELAEAILAPHRLTDENLKALGTAFASRLFKSALLVMDAIHGKGQGQEVASNV
SIO_010081: DMR_RS22080
subclass of: SO_0000673
so part of: DMR_RS22080
location: complement(41925..42194)
location: region:41925-42194:-1
so has part: feature:41925-42194:-1:exon

WP_012750645.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41925-42194:-1:exon

DMR_RS24825
type: Gene
subclass of: SO_0000704
RO_0002162: 573370
locus tag: DMR_RS24825
so part of: sequence
location: complement(42282..42623)
location: region:42282-42623:-1
so has part: feature:42282-42623:-1:exon
subclass of: SO_0000010

position:42282:-1
position: 42282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42623:-1
position: 42623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42282-42623:-1:exon

DMR_RS24825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573370
locus tag: DMR_RS24825
inference: COORDINATES: protein motif:HMM:TIGR01764.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MSKAVLDLEAIRVARANLDRLAKEHPELIDPARASWAEEDITAMIVDPTRTAYSTREVAEILGVHEETIRREVQRGHLKAAKLGRMFIISKADLAAYYEAKGGGRLFEDDAQE
SIO_010081: DMR_RS24825
subclass of: SO_0000673
so part of: DMR_RS24825
location: complement(42282..42623)
location: region:42282-42623:-1
so has part: feature:42282-42623:-1:exon

WP_148208559.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42282-42623:-1:exon

DMR_RS22090
type: Gene
subclass of: SO_0000704
RO_0002162: 573370
locus tag: DMR_RS22090
old locus tag: DMR_p1_00480
so part of: sequence
location: complement(42620..43291)
location: region:42620-43291:-1
so has part: feature:42620-43291:-1:exon
subclass of: SO_0000010

position:42620:-1
position: 42620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43291:-1
position: 43291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42620-43291:-1:exon

DMR_RS22090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573370
locus tag: DMR_RS22090
old locus tag: DMR_p1_00480
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012979608.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MAIFAYLRVSTLDQAESGAGLAAQLDACRRFAKSQEAELTAVFEDRGISGSKGLEARPGLLDAVATMGKGDVLLVAKRDRLGRDPIQVALIERAVSRKGARIVSAAGEGTDGDDPASILMRRMVDAFAEYERLLIGARTKSAMGAMKRRGERVGQIPYGYSLATDGVKLIPVSAEQEVIAEARRLHGAGLSLRGIAKELEARGFASRSGKAFLAEQVKRLLAA
SIO_010081: DMR_RS22090
subclass of: SO_0000673
so part of: DMR_RS22090
location: complement(42620..43291)
location: region:42620-43291:-1
so has part: feature:42620-43291:-1:exon

WP_148208560.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42620-43291:-1:exon

DMR_RS22095
type: Gene
subclass of: SO_0000704
RO_0002162: 573370
locus tag: DMR_RS22095
old locus tag: DMR_p1_00490
so part of: sequence
location: 43490..43810
location: region:43490-43810:1
so has part: feature:43490-43810:1:exon
subclass of: SO_0000010

position:43490:1
position: 43490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43810:1
position: 43810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43490-43810:1:exon

DMR_RS22095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573370
locus tag: DMR_RS22095
old locus tag: DMR_p1_00490
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009182446.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system RelE/ParE family toxin
translation: MNVVRRYRTEDGREVVTEWLAGLRDIRARARIAARIDRLKAGNLGDTKPLRDGVSELRVDYGPGYRVYFGVVGFQVILLLCGGDKRTQSADIDKAVDYLADFKRRV
SIO_010081: DMR_RS22095
subclass of: SO_0000673
so part of: DMR_RS22095
location: 43490..43810
location: region:43490-43810:1
so has part: feature:43490-43810:1:exon

WP_012750648.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43490-43810:1:exon

DMR_RS22100
type: Gene
subclass of: SO_0000704
RO_0002162: 573370
locus tag: DMR_RS22100
old locus tag: DMR_p1_00500
so part of: sequence
location: 43822..44145
location: region:43822-44145:1
so has part: feature:43822-44145:1:exon
subclass of: SO_0000010

position:43822:1
position: 43822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44145:1
position: 44145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43822-44145:1:exon

DMR_RS22100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573370
locus tag: DMR_RS22100
old locus tag: DMR_p1_00500
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013259398.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: putative addiction module antidote protein
translation: MNRASVSHDDALVRELRTDPAFAAEYLQAAMEDTEEPAVLLIALRHVSEAYGMADVAKAAGIKRESLYRALSPKGNPTLKTLTAVLKAVGLRLAVAPGSSGQQPACA
SIO_010081: DMR_RS22100
subclass of: SO_0000673
so part of: DMR_RS22100
location: 43822..44145
location: region:43822-44145:1
so has part: feature:43822-44145:1:exon

WP_043602442.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43822-44145:1:exon

DMR_RS24075
type: Gene
subclass of: SO_0000704
RO_0002162: 573370
locus tag: DMR_RS24075
old locus tag: DMR_p1_00510
so part of: sequence
location: 44451..44669
location: region:44451-44669:1
so has part: feature:44451-44669:1:exon
subclass of: SO_0000010

position:44451:1
position: 44451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44669:1
position: 44669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44451-44669:1:exon

DMR_RS24075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573370
locus tag: DMR_RS24075
old locus tag: DMR_p1_00510
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTKPTFTVGIGQYADMYDLHLAAVGALRKAGLEDHARELRQRGMDAPSWYDMLVLIGEYLDVDLEPCSRGRG
SIO_010081: DMR_RS24075
subclass of: SO_0000673
so part of: DMR_RS24075
location: 44451..44669
location: region:44451-44669:1
so has part: feature:44451-44669:1:exon

WP_232502945.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44451-44669:1:exon

DMR_RS22110
type: Gene
subclass of: SO_0000704
RO_0002162: 573370
locus tag: DMR_RS22110
old locus tag: DMR_p1_00520
so part of: sequence
location: complement(44689..44973)
location: region:44689-44973:-1
so has part: feature:44689-44973:-1:exon
subclass of: SO_0000010

position:44689:-1
position: 44689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44973:-1
position: 44973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44689-44973:-1:exon

DMR_RS22110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573370
locus tag: DMR_RS22110
old locus tag: DMR_p1_00520
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPMYDPNANVAALARQALNGQGEAPDEEAQRKAEEARAVEEGRAEAEYQAARFRKTNLGEDEDSAFTSRRRTLRRISAGWEPLTTPSMPSDSLE
SIO_010081: DMR_RS22110
subclass of: SO_0000673
so part of: DMR_RS22110
location: complement(44689..44973)
location: region:44689-44973:-1
so has part: feature:44689-44973:-1:exon

WP_012750651.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44689-44973:-1:exon

DMR_RS22115
type: Gene
subclass of: SO_0000704
RO_0002162: 573370
locus tag: DMR_RS22115
old locus tag: DMR_p1_00530
so part of: sequence
location: complement(44979..45467)
location: region:44979-45467:-1
so has part: feature:44979-45467:-1:exon
subclass of: SO_0000010

position:44979:-1
position: 44979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45467:-1
position: 45467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44979-45467:-1:exon

DMR_RS22115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573370
locus tag: DMR_RS22115
old locus tag: DMR_p1_00530
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSGKKSGDVAKKVAGRPCSFSQEVADAVCQGIMEGRGLRSICADPGMPGPATVYSWLTKYASFQEQYALAREVQADVYFDEVVSIADNEPDPQIARNRIDARKWAASKLRPKRYGDRLEVEHQGGVGMNAVQITISPATPLAPAMPAVLDVTPKPALPCVEE
SIO_010081: DMR_RS22115
subclass of: SO_0000673
so part of: DMR_RS22115
location: complement(44979..45467)
location: region:44979-45467:-1
so has part: feature:44979-45467:-1:exon

WP_012750652.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44979-45467:-1:exon

DMR_RS22120
type: Gene
subclass of: SO_0000704
RO_0002162: 573370
locus tag: DMR_RS22120
old locus tag: DMR_p1_00540
so part of: sequence
location: complement(45939..46232)
location: region:45939-46232:-1
so has part: feature:45939-46232:-1:exon
subclass of: SO_0000010

position:45939:-1
position: 45939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46232:-1
position: 46232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45939-46232:-1:exon

DMR_RS22120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573370
locus tag: DMR_RS22120
old locus tag: DMR_p1_00540
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDVVCETVDDDNILHAAAMSYIFTNAPEGVRNILRKAFDKVFPVQADYRGPNGERLYSMELAAKIFGCTVDEMHERANALLPPQDIVHDADDIARVQ
SIO_010081: DMR_RS22120
subclass of: SO_0000673
so part of: DMR_RS22120
location: complement(45939..46232)
location: region:45939-46232:-1
so has part: feature:45939-46232:-1:exon

WP_043602397.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45939-46232:-1:exon

DMR_RS25535
type: Gene
subclass of: SO_0000704
RO_0002162: 573370
locus tag: DMR_RS25535
so part of: sequence
location: 46236..46529
location: region:46236-46529:1
so has part: feature:46236-46529:1:exon
subclass of: SO_0000010

position:46236:1
position: 46236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46529:1
position: 46529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46236-46529:1:exon

DMR_RS25535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573370
locus tag: DMR_RS25535
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVDVNELTLQGINKAALFFQRQGTTPTLDGITFTGGAGERAHKLRRRLTLGETSPGLGQVGFDEGGKVSGLAVDFMTSSHDVAVEMGSAHETEKIVR
SIO_010081: DMR_RS25535
subclass of: SO_0000673
so part of: DMR_RS25535
location: 46236..46529
location: region:46236-46529:1
so has part: feature:46236-46529:1:exon

WP_232502946.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:46236-46529:1:exon

DMR_RS22130
type: Gene
subclass of: SO_0000704
RO_0002162: 573370
locus tag: DMR_RS22130
old locus tag: DMR_p1_00550
so part of: sequence
location: complement(46650..46919)
location: region:46650-46919:-1
so has part: feature:46650-46919:-1:exon
subclass of: SO_0000010

position:46650:-1
position: 46650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46919:-1
position: 46919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46650-46919:-1:exon

DMR_RS22130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573370
locus tag: DMR_RS22130
old locus tag: DMR_p1_00550
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009183034.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TraK family protein
translation: MTKSGRIARCMGRVEFRSCQIEILDMHKKGYANKHIYDKLAAQGMLTLAYSTFNAHLRKMLQAKDSKQIEIQSVDQKKIFEVPRSTELI
SIO_010081: DMR_RS22130
subclass of: SO_0000673
so part of: DMR_RS22130
location: complement(46650..46919)
location: region:46650-46919:-1
so has part: feature:46650-46919:-1:exon

WP_148208561.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:46650-46919:-1:exon

DMR_RS22135
type: Gene
subclass of: SO_0000704
RO_0002162: 573370
locus tag: DMR_RS22135
old locus tag: DMR_p1_00560
so part of: sequence
location: 47353..47913
location: region:47353-47913:1
so has part: feature:47353-47913:1:exon
subclass of: SO_0000010

position:47353:1
position: 47353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47913:1
position: 47913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47353-47913:1:exon

DMR_RS22135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573370
locus tag: DMR_RS22135
old locus tag: DMR_p1_00560
inference: COORDINATES: similar to AA sequence:RefSeq:YP_005220837.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MQGHRIGYVRVSSFDQNPERQLEHVQVDKVFTDKASGKDTRRPQLDALLAFVREGDTVVVHSMDRLARNLDDLRRLVHSLTQRGVRIEFVKESLSFTGEDSPMANLMLSVMGAFAEFERALIRERQREGISLAKQRGAYRGRKKALAQDRVLELRRRVAAGEKKAPLAREFGISRETLYQYLKTND
SIO_010081: DMR_RS22135
subclass of: SO_0000673
so part of: DMR_RS22135
location: 47353..47913
location: region:47353-47913:1
so has part: feature:47353-47913:1:exon

WP_043602402.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:47353-47913:1:exon

DMR_RS22140
type: Gene
subclass of: SO_0000704
RO_0002162: 573370
locus tag: DMR_RS22140
old locus tag: DMR_p1_00570
so part of: sequence
location: 47916..50885
location: region:47916-50885:1
so has part: feature:47916-50885:1:exon
subclass of: SO_0000010

position:47916:1
position: 47916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50885:1
position: 50885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47916-50885:1:exon

DMR_RS22140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573370
locus tag: DMR_RS22140
old locus tag: DMR_p1_00570
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014834018.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Tn3 family transposase
translation: MPRRSLLTPAERATLLAFPTTDDELIRHYTLSEADLSVIRQRRGNHNRLGFAVQLCYLRYPGFALPSEAEPPASLLNIIGSQLYIEPDIWPQYAQRPETRREHLLELQAWLNLAPFAAADYRHLVQQLAELAKQTDRGIVLAEALVDLLRQQCIILPALDVIDRVCSEALTRGTRQVYEALTTPLTDHHRRALDALLAIREGSKSSGLIWLRQPPGAPKPKHVLAHLERLKTLRELGLPDGLEHAVHQNRLLKLAREGGQMTAQHLRDLEPARRYATLVAVLLDTRATLIDEIIDLHDRFIGSLFGKAKRKHADRFQESAKAINDKMRLYSRIGRALLDAKLSGDDPFAAIEAIMPWEAFTESITEAERLAQPEEFDYLALVGDGFNQFRRYTPTLLDALNLKAAPAARDLLEAVEVLKDMNSRQARKVPDDAPTSFVRKRWENLVHTSDGLDRRYYELCVLSELKNSLRSGDIWVQGSRQFKDFEDYLLPPARFSAQRDQLELGLAVETDCNRYLESRLIVLQEQLDTVERLAAAHELPDAAITSSGRLKISPLNNAVPDHAEALMQQAYSLLPHLKITELLLEVDGWTGFTRHFKHLKSGATADDKHLLLTAVLADAINLGLSKMAESCPGTTYAKLTWLQAWHIRDETYSAGLAELVNAQFRQPFAAYWGDGTTSSSDGQNYKAGGRGQFAGQVNLKYGQEPGVQFYTHISDQYAPFHTKIINATVRDATHVLDGLLYHESDLRIEEHYTDTAGFTDHVFALMQLLGFRFAPRIRDLADKRLYIHGDAKQYPTLAGLIGGSVNIKHVRAHWDEILRLAASIKQGTVTASLMLRKLGSYPRQNGLAVALREFGRIERTLFALNWMQNIELRRRVQIGLNKGEAKNALARAVFMNRLGEIRDRSFQNQRYRASGLNLVVTAIILWNTVYLERAIHLLRDTSQAIDEKLLPHLSPLGWEHINLTGDYIWRQHKLIEQGKFRPLRMLAEA
SIO_010081: DMR_RS22140
subclass of: SO_0000673
so part of: DMR_RS22140
location: 47916..50885
location: region:47916-50885:1
so has part: feature:47916-50885:1:exon

WP_012750656.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:47916-50885:1:exon

DMR_RS22145
type: Gene
subclass of: SO_0000704
RO_0002162: 573370
locus tag: DMR_RS22145
old locus tag: DMR_p1_00580
so part of: sequence
location: complement(50918..51124)
location: region:50918-51124:-1
so has part: feature:50918-51124:-1:exon
subclass of: SO_0000010

position:50918:-1
position: 50918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51124:-1
position: 51124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50918-51124:-1:exon

DMR_RS22145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573370
locus tag: DMR_RS22145
old locus tag: DMR_p1_00580
inference: COORDINATES: protein motif:HMM:NF024214.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NTP transferase domain-containing protein
translation: MKAIILAAGVGSRLGKPFPKALSQLPSGETIMGRQIRILRENGLSEIIVVVGFKMALLMEHFPSVLYK
SIO_010081: DMR_RS22145
subclass of: SO_0000673
so part of: DMR_RS22145
location: complement(50918..51124)
location: region:50918-51124:-1
so has part: feature:50918-51124:-1:exon

WP_012750657.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50918-51124:-1:exon

DMR_RS22150
type: Gene
subclass of: SO_0000704
RO_0002162: 573370
locus tag: DMR_RS22150
old locus tag: DMR_p1_00590
so part of: sequence
location: complement(51121..52347)
location: region:51121-52347:-1
so has part: feature:51121-52347:-1:exon
subclass of: SO_0000010

position:51121:-1
position: 51121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:52347:-1
position: 52347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51121-52347:-1:exon

DMR_RS22150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573370
locus tag: DMR_RS22150
old locus tag: DMR_p1_00590
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009182987.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0047355 - CDP-glycerol glycerophosphotransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CDP-glycerol glycerophosphotransferase family protein
translation: MDQAPSAAVRLAAVLAKTPKAPDHVVFVGRAGGLFIDNGKYAFLHAVRHAPHLRCAFMTFDAGQAKLLRAKGLDAFCFDDPDGPSRLARAAIVVSDDMSWKTRTLAPLFTQGAFLVQLWHGIPLKAIGFPEIQSAVNMNPEKARDLTVGYSGYDAVLSTSPFFREKAFARAFRAKAFWDLGYPRNDALQRAPDKLDMINVDQTLYVELVRAKKQGLKIVFYMPTFRDLGGDPWGDGAFDYPLFADFARARGVLLVCKFHPYIRLDFTGQIEHLRFCPPESDAYPLLRLADLLMTDYSSIYFDFLLTDKPMLFFPYDFEAYVTRNRELLFDYDAFTPGPKAHDTKSLLAAMADLLDGKDDFIQARQKLKELSFAEPDARAGQRLLGALTEVSTALGRSPDVNPNNERFP
SIO_010081: DMR_RS22150
subclass of: SO_0000673
so part of: DMR_RS22150
location: complement(51121..52347)
location: region:51121-52347:-1
so has part: feature:51121-52347:-1:exon

WP_012750658.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:51121-52347:-1:exon

DMR_RS22155
type: Gene
subclass of: SO_0000704
RO_0002162: 573370
locus tag: DMR_RS22155
old locus tag: DMR_p1_00600
so part of: sequence
location: 52733..53533
location: region:52733-53533:1
so has part: feature:52733-53533:1:exon
subclass of: SO_0000010

position:52733:1
position: 52733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53533:1
position: 53533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52733-53533:1:exon

DMR_RS22155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573370
locus tag: DMR_RS22155
old locus tag: DMR_p1_00600
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005994214.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MAKPIIITVGNNKGGVGKSTTCVNLSAGLAQEGATVLVVDGDPQSNTTSTLLPDFGLRENSSLVKALEDPEGAFSPNACATKTEHMEIVPNSIRCMEWEVRSYAGIDSVLGFSRLLQNDKDISRYDYMIIDTPPNIGPMLRNSLLISDFVLVPCPVGDQYALDGFSTFIQVLSQAKQQNKKLLLLGVVLTKFDGRAVTHKKNKDRIRAFFDAKGIPVFDTEIRVNIDIDRAHSHRKSIFEFDATKSGALDYHALAREVIARVEKQA
SIO_010081: DMR_RS22155
subclass of: SO_0000673
so part of: DMR_RS22155
location: 52733..53533
location: region:52733-53533:1
so has part: feature:52733-53533:1:exon

WP_012750659.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:52733-53533:1:exon

DMR_RS22160
type: Gene
subclass of: SO_0000704
RO_0002162: 573370
locus tag: DMR_RS22160
old locus tag: DMR_p1_00610
so part of: sequence
location: 53949..54926
location: region:53949-54926:1
so has part: feature:53949-54926:1:exon
subclass of: SO_0000010

position:53949:1
position: 53949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:54926:1
position: 54926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53949-54926:1:exon

DMR_RS22160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573370
locus tag: DMR_RS22160
old locus tag: DMR_p1_00610
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGDRLNDNQRRVLDLLLATKPYIVKFRDIAQALAMREASVRTVMRRLDALGFLSFRKARDGNLQGVGVTFNQPVVEQYQQDRTLSPSTSLTTGLSSSHKTNQTQSPSISREKDQSPSQPISEPHSQSASHTPPLKIEKKEYLSIEAMEGWDEAFLELMWPRVFAAGLRQEQLDQAAAARQKLGKALDRDLLALSLDRAEWELETQGKLVDLQSGEPVRNAAAYIYTALARWGVLRAHPQYVSREQAEAEAAVDALRRRQEALDTLENLRFEQYRAELTPQELESILQGFPGGSKDAWIKAYWRKNVREAETGQGGQTPTTRKGTA
SIO_010081: DMR_RS22160
subclass of: SO_0000673
so part of: DMR_RS22160
location: 53949..54926
location: region:53949-54926:1
so has part: feature:53949-54926:1:exon

WP_232502947.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:53949-54926:1:exon

DMR_RS22165
type: Gene
subclass of: SO_0000704
RO_0002162: 573370
locus tag: DMR_RS22165
old locus tag: DMR_p1_00620
so part of: sequence
location: 54923..56521
location: region:54923-56521:1
so has part: feature:54923-56521:1:exon
subclass of: SO_0000010

position:54923:1
position: 54923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:56521:1
position: 56521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54923-56521:1:exon

DMR_RS22165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573370
locus tag: DMR_RS22165
old locus tag: DMR_p1_00620
inference: COORDINATES: protein motif:HMM:NF012711.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: amino acid adenylation domain-containing protein
translation: MMGNIAAGFFRLAEHFLDRDALDVQGQRVSYGALRDDALAIAGAVAAHAGSRPHVAVFDQRSRSAYAAVLGILAAGRAYVPLNPGFPAQRTRHMLIRSGCAAVVTSAEHLPALAALLDHPEAEAALDELTVILAPEEGGPASLAPGLSPKLARGPRLVRAGSSPATAVAEVEKGQTAYLLFTSGSTGAPKGVAVSHGNVGAYLDYVASRYAPCPEDRFSQLFDLTFDLSVHDMFVCFGAGACLCVPAAASLMAPGRFIRDKGLTVWFSTPSTAAFMARLGMLKPDAFPGLRLSLFCGEPLPAATAAAWSRAAPHSRLENLYGPTETTIAIAHYAWDPAVSPGQCQNGLTPIGRVFANHDRVVVGPDGAPAKPGQAGELLLAGVQVTRGYLDDEARTAGQFVRCGDDGRIWYRTGDIVREDQDGILQYLARTDQQVKIRGFRVELSEVEHAVRSFCQAPYVVAVPWPLHQGNPEGLILAVFGGDKSQDEIINHCKNRLPGYMVPARVDFLETVPLNSNGKIDRAAVKQLLTGI
SIO_010081: DMR_RS22165
subclass of: SO_0000673
so part of: DMR_RS22165
location: 54923..56521
location: region:54923-56521:1
so has part: feature:54923-56521:1:exon

WP_043602405.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:54923-56521:1:exon

DMR_RS22170
type: Gene
subclass of: SO_0000704
RO_0002162: 573370
locus tag: DMR_RS22170
old locus tag: DMR_p1_00630
so part of: sequence
location: 56523..56792
location: region:56523-56792:1
so has part: feature:56523-56792:1:exon
subclass of: SO_0000010

position:56523:1
position: 56523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:56792:1
position: 56792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56523-56792:1:exon

DMR_RS22170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573370
locus tag: DMR_RS22170
old locus tag: DMR_p1_00630
inference: COORDINATES: protein motif:HMM:NF012759.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acyl carrier protein
translation: MQDVKDALRRFIAGHLEEAAARKGRVVTVTDDLYILGEQLLDSLEFLNLLMAVEQRFQLEVDFSDRDIAEVTRFGALVDAFAATAGQGG
SIO_010081: DMR_RS22170
subclass of: SO_0000673
so part of: DMR_RS22170
location: 56523..56792
location: region:56523-56792:1
so has part: feature:56523-56792:1:exon

WP_012750662.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:56523-56792:1:exon

DMR_RS22175
type: Gene
subclass of: SO_0000704
RO_0002162: 573370
locus tag: DMR_RS22175
old locus tag: DMR_p1_00640
so part of: sequence
location: 56789..57514
location: region:56789-57514:1
so has part: feature:56789-57514:1:exon
subclass of: SO_0000010

position:56789:1
position: 56789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:57514:1
position: 57514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56789-57514:1:exon

DMR_RS22175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573370
locus tag: DMR_RS22175
old locus tag: DMR_p1_00640
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSVNWAAIAEARHVAVKDCWTTCDGYCCKNFLAGELSLPDADKVIVPYLPGEFAYQQTLGGLPESVRAVRQTYVLPDGRPWNVDFLHCTAKGRCDGLFYKPLVCRIYPYFPLVDLAGSIRGFEYCSLMDLFHAGPDAHPCTLARELGQAVQDGLRRSLAPALRFPEIIFAFAMFERIVTALRRAVPGVLDGEPGSEGRGRFLRAYQWQVFSRKPWATPAFAEETAALYAAMTRRHGPLDLA
SIO_010081: DMR_RS22175
subclass of: SO_0000673
so part of: DMR_RS22175
location: 56789..57514
location: region:56789-57514:1
so has part: feature:56789-57514:1:exon

WP_012750663.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:56789-57514:1:exon

DMR_RS22180
type: Gene
subclass of: SO_0000704
RO_0002162: 573370
locus tag: DMR_RS22180
old locus tag: DMR_p1_00650
so part of: sequence
location: 57750..58493
location: region:57750-58493:1
so has part: feature:57750-58493:1:exon
subclass of: SO_0000010

position:57750:1
position: 57750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:58493:1
position: 58493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57750-58493:1:exon

DMR_RS22180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573370
locus tag: DMR_RS22180
old locus tag: DMR_p1_00650
inference: COORDINATES: protein motif:HMM:NF014571.2
GO function: GO:0046353 - aminoglycoside 3-N-acetyltransferase activity [Evidence IEA]
GO process: GO:0046677 - response to antibiotic [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAC(3) family N-acetyltransferase
translation: MARRRANDLPEVVIEALERRIGPDGVLVMPAFGYDFPRTGQCDLRQEPSVVGVLTERLRRMPGTLRSVHPMFSFVGRGAGAEALLRPDRAERHPFGPDSVLARLHEANALTLLLGAQFRTCTAFVYSERVHGAPYRFDKAFAGAVTGLDGTVHQGDFYHYCLPRSISLQPDYSRAAAQLLADGTARRIKAGLGAVTFFRCAPVHAFLGRELAADPWYLLSAPPEMLVTYANGVETLVEPGELSSHRR
SIO_010081: DMR_RS22180
subclass of: SO_0000673
so part of: DMR_RS22180
location: 57750..58493
location: region:57750-58493:1
so has part: feature:57750-58493:1:exon

WP_012750664.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:57750-58493:1:exon