Solidesulfovibrio magneticus RS-1 plasmid pDMC2, complete sequence.
type: Entry
definition: Solidesulfovibrio magneticus RS-1 plasmid pDMC2, complete sequence.
sequence version: NC_012795.1
sequence date: 2022-12-12
sequence: sequence
division: CON
label: NC_012795.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMD00060954
keyword: RefSeq
source: Solidesulfovibrio magneticus RS-1
organism: Solidesulfovibrio magneticus RS-1
taxonomy: Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Solidesulfovibrio.
reference: 1
references: 19675025
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nAP010906.1.\n'Arakaki, A., Tsuruyama, A., Okamura, Y., Takeyama, H. and\nMatsunaga, T. are at Department of Biotechnology, Tokyo University\nof Agriculture and Technology. The other authors are at NITE\nBioresource Information Center (NBIC).\n\nPlease visit our web site. URL:http://www.bio.nite.go.jp/\n\nDOGAN ; Database of Genomes Analyzed at NITE. The database contains\ngenome sequence data, physical maps and the genomic and proteomic\ndata of the microorganisms analyzed.\nURL:http://www.bio.nite.go.jp/dogan/Top\n\nThe microbial strain and microbial genomic DNA clones used for the\nsequencing project are available through the NBRC.\nURL:http://www.nbrc.nite.go.jp/e/index.html.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 12/12/2022 13:45:55\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.3\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 4,706\nCDSs (total) :: 4,638\nGenes (coding) :: 4,596\nCDSs (with protein) :: 4,596\nGenes (RNA) :: 68\nrRNAs :: 3, 3, 3 (5S, 16S, 23S)\ncomplete rRNAs :: 3, 3, 3 (5S, 16S, 23S)\ntRNAs :: 54\nncRNAs :: 5\nPseudo Genes (total) :: 42\nCDSs (without protein) :: 42\nPseudo Genes (ambiguous residues) :: 0 of 42\nPseudo Genes (frameshifted) :: 8 of 42\nPseudo Genes (incomplete) :: 36 of 42\nPseudo Genes (internal stop) :: 3 of 42\nPseudo Genes (multiple problems) :: 5 of 42\nCRISPR Arrays :: 2\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 8867
topology: circular
so has quality: SO_0000988
location: 1..8867
location: region:1-8867:1
RO_0002162: 573370

NC_012795
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMD00060954
type: BioSample
SIO_000068: biosample

1
title: Whole genome sequence of Desulfovibrio magneticus strain RS-1 revealed common gene clusters in magnetotactic bacteria
author: Nakazawa, H.
author: Arakaki, A.
author: Narita-Yamada, S.
author: Yashiro, I.
author: Jinno, K.
author: Aoki, N.
author: Tsuruyama, A.
author: Okamura, Y.
author: Tanikawa, S.
author: Fujita, N.
author: Takeyama, H.
author: Matsunaga, T.
journal: Genome Res
volume: 19
issue: 10
pages: 1801-1808
year: 2009
pubmed: 19675025

19675025
type: PubMed
SIO_000068: pubmed

2
title: Direct Submission
author: Nakazawa, H.
author: Narita-Yamada, S.
author: Yashiro, I.
author: Jinno, K.
author: Aoki, N.
author: Tsuruyama, A.
author: Arakaki, A.
author: Okamura, Y.
author: Tanikawa, S.
author: Fujita, N.
author: Takeyama, H.
author: Matsunaga, T.
journal: Submitted (03-OCT-2008) Contact:Director-General Department of Biotechnology National Institute of Technology and Evaluation, NITE Bioresource Information Center (NBIC), Department of Biotechnology; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066, Japan URL :http://www.bio.nite.go.jp/

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8867:1
position: 8867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-8867:1:source
so part of: sequence
organism: Solidesulfovibrio magneticus RS-1
mol type: genomic DNA
strain: RS-1
type material: type strain of Desulfovibrio magneticus
plasmid: pDMC2

573370
type: Taxonomy
SIO_000068: taxonomy

DMR_RS24085
type: Gene
subclass of: SO_0000704
RO_0002162: 573370
locus tag: DMR_RS24085
old locus tag: DMR_p2_00010
so part of: sequence
location: 100..879
location: region:100-879:1
so has part: feature:100-879:1:exon
subclass of: SO_0000010

position:100:1
position: 100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:879:1
position: 879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100-879:1:exon

DMR_RS24085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573370
locus tag: DMR_RS24085
old locus tag: DMR_p2_00010
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006918411.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MTTIIACSNNKGGSGKTCCSVTLAHALGNRGKKVLVCDLDTQCNSTSLLLRQGDNPRNSLYELLSSEADAPSCIYASKYENVDVLPNVEEVAALEFSLIKDAERNLTLFRDKISSYIENKYDFVMLDCPPNLGFWTMGALITANLVISPTVSGSGFSLDGLLRTIKLIQDIQQQTNPSLRFFRLLINNVDKRTTMGKVTLAQLVDKLGQDMIFATTIPASSQFQQAEHLRETVLRSNSKSPAAKAYRALAQEILELVEG
SIO_010081: DMR_RS24085
subclass of: SO_0000673
so part of: DMR_RS24085
location: 100..879
location: region:100-879:1
so has part: feature:100-879:1:exon

WP_012749576.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:100-879:1:exon

DMR_RS24090
type: Gene
subclass of: SO_0000704
RO_0002162: 573370
locus tag: DMR_RS24090
old locus tag: DMR_p2_00020
so part of: sequence
location: 882..1997
location: region:882-1997:1
so has part: feature:882-1997:1:exon
subclass of: SO_0000010

position:882:1
position: 882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1997:1
position: 1997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:882-1997:1:exon

DMR_RS24090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573370
locus tag: DMR_RS24090
old locus tag: DMR_p2_00020
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGTRKGISSLLSGVKKNPDDQQKRSTTFEKLMQISPFDSEPNISEIAQQVSEKSVSKSVSKGQTKGQTFGQRSVSKGQTKGQTFGQRSGLTKSVSKISDNNNDFSPSREHSEKGIFYFRSPGEPRTKSEKILWKYLEKNQIIVINYDDLSEETRIPRTTIRNVFRRWSEQNILIKTKAPGNLGLKIEFTPNGQTNGQAQGVSILPSKIDRRDLNLSISLETLQTAWPNLARKGFGLEQISQIEKILTEQGKGLTRVVQGLDHAEWELAHDQMLDKAGQPVADPCSWVYRSLARDGYYRRPKGYISPQEQAEKDDEAEAKALIDARNAADQARFQAWKTGISENDFQKAMKGFPGGDREAWLKKVWKERSRE
SIO_010081: DMR_RS24090
subclass of: SO_0000673
so part of: DMR_RS24090
location: 882..1997
location: region:882-1997:1
so has part: feature:882-1997:1:exon

WP_012749577.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:882-1997:1:exon

DMR_RS24095
type: Gene
subclass of: SO_0000704
RO_0002162: 573370
locus tag: DMR_RS24095
old locus tag: DMR_p2_00030
so part of: sequence
location: 2303..3055
location: region:2303-3055:1
so has part: feature:2303-3055:1:exon
subclass of: SO_0000010

position:2303:1
position: 2303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3055:1
position: 3055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2303-3055:1:exon

DMR_RS24095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573370
locus tag: DMR_RS24095
old locus tag: DMR_p2_00030
inference: COORDINATES: protein motif:HMM:NF013691.2
GO process: GO:0006351 - DNA-templated transcription [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HTH domain-containing protein
translation: MPELSWREACIRVLTDSDGALHCKDISDKIYIDGYKKQMGVKPSGLVYNTIYNSIKNDKENSPFIQVGKSMFALKTTKDESEDDSKSKRKKKETESAECLVKACGLFWQAKYVDWKSSPKLLGRESVGSECIDFSNQSGIYILYEHHAPIYVGRAAKCNLAKRISDHVRDKHAGRWDRFTWLGFLEVGSKGELSKSSKEVFNSESLILTVEAVLIETLEAPRNKRGGDGFDQIEYLQVLDPGLLDKRYFA
SIO_010081: DMR_RS24095
subclass of: SO_0000673
so part of: DMR_RS24095
location: 2303..3055
location: region:2303-3055:1
so has part: feature:2303-3055:1:exon

WP_012749578.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2303-3055:1:exon

DMR_RS24100
type: Gene
subclass of: SO_0000704
RO_0002162: 573370
locus tag: DMR_RS24100
old locus tag: DMR_p2_00040
so part of: sequence
location: complement(3057..3941)
location: region:3057-3941:-1
so has part: feature:3057-3941:-1:exon
subclass of: SO_0000010

position:3057:-1
position: 3057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3941:-1
position: 3941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3057-3941:-1:exon

DMR_RS24100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573370
locus tag: DMR_RS24100
old locus tag: DMR_p2_00040
inference: COORDINATES: protein motif:HMM:NF015736.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replicative DNA helicase
translation: MKSQLSDALSGVLDKIKCNPSLSDNKTGLSTGIEVLDVYFRGITPGEVTVISGQRRHQFSLILNIILNIGLNTDTSIYYFSLGLTKENFALKLLCCHTDVSMQKPYTGMCSNLELEALTKSARTIETSGIKLQATDELAIQNLRDTIIDIDKNDKKTKFIVVDFMQNINFNRDFSTEHLFMVHSIETIKDIAKDTNMPIVALYYEYEKEMSGQSQISGDDLVNLMHTDLDALILVNDTMSSGSSEDQDSDDPYLKIFFADKYGMRADFIIQYSPHSLKTVNKPSIEAPKLYEPG
SIO_010081: DMR_RS24100
subclass of: SO_0000673
so part of: DMR_RS24100
location: complement(3057..3941)
location: region:3057-3941:-1
so has part: feature:3057-3941:-1:exon

WP_012749579.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3057-3941:-1:exon

DMR_RS24105
type: Gene
subclass of: SO_0000704
RO_0002162: 573370
locus tag: DMR_RS24105
old locus tag: DMR_p2_00050
so part of: sequence
location: 4363..5169
location: region:4363-5169:1
so has part: feature:4363-5169:1:exon
subclass of: SO_0000010

position:4363:1
position: 4363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5169:1
position: 5169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4363-5169:1:exon

DMR_RS24105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573370
locus tag: DMR_RS24105
old locus tag: DMR_p2_00050
inference: COORDINATES: protein motif:HMM:NF015736.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKDAVERVIDKIIRASSSKGNGFGIMSKLDAIDSITNGFKPGLVYVVAAEAGAYKTALCLTILEKIGIESEASVAYFNKFSTEDMLVTRMIFQFADVDYVHYIENNIENHDILALKRAGDAIATSKIKMFCSKNVSLDDIYDTCAEADRPDIIIVDSLNDVSLERGLEFTLQFLKSTAIECEIPIIVTYEVPLKNINKTALLENGADTIFYLDNEVWEDVFGTDYFGDPIMLSYIELHVVRNFCGPTRKSRLFVKKNSLKFYNYDISI
SIO_010081: DMR_RS24105
subclass of: SO_0000673
so part of: DMR_RS24105
location: 4363..5169
location: region:4363-5169:1
so has part: feature:4363-5169:1:exon

WP_012749580.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4363-5169:1:exon

DMR_RS24830
type: Gene
subclass of: SO_0000704
RO_0002162: 573370
locus tag: DMR_RS24830
so part of: sequence
location: complement(5386..5601)
location: region:5386-5601:-1
so has part: feature:5386-5601:-1:exon
subclass of: SO_0000010

position:5386:-1
position: 5386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5601:-1
position: 5601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5386-5601:-1:exon

DMR_RS24830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573370
locus tag: DMR_RS24830
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKHEHEIENILKLIDKQEYVLEISTVGMEIYYEMLDCVQGFLRKKGFDARYYDDSNGKRLVAIEKYRGKFE
SIO_010081: DMR_RS24830
subclass of: SO_0000673
so part of: DMR_RS24830
location: complement(5386..5601)
location: region:5386-5601:-1
so has part: feature:5386-5601:-1:exon

WP_148208567.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5386-5601:-1:exon

DMR_RS24110
type: Gene
subclass of: SO_0000704
RO_0002162: 573370
locus tag: DMR_RS24110
old locus tag: DMR_p2_00060
so part of: sequence
location: 5844..6293
location: region:5844-6293:1
so has part: feature:5844-6293:1:exon
subclass of: SO_0000010

position:5844:1
position: 5844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6293:1
position: 6293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5844-6293:1:exon

DMR_RS24110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573370
locus tag: DMR_RS24110
old locus tag: DMR_p2_00060
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MHYRHTKKFIEKFFKTYKSNEIDNIVVTNFDEAEFVCILQIVIRLLQIDQSKLEAMLDLKKKTLSDIFNMYDENCKRKRNVRYETRFGIYQSLINVLNIFWAKVKANISKRDVGMAYNLKHVENIKKDMEKLENKNINEWTKKVSLKIS
SIO_010081: DMR_RS24110
subclass of: SO_0000673
so part of: DMR_RS24110
location: 5844..6293
location: region:5844-6293:1
so has part: feature:5844-6293:1:exon

WP_012749581.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5844-6293:1:exon

DMR_RS24115
type: Gene
subclass of: SO_0000704
RO_0002162: 573370
locus tag: DMR_RS24115
old locus tag: DMR_p2_00070
so part of: sequence
location: 6603..7070
location: region:6603-7070:1
so has part: feature:6603-7070:1:exon
subclass of: SO_0000010

position:6603:1
position: 6603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7070:1
position: 7070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6603-7070:1:exon

DMR_RS24115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573370
locus tag: DMR_RS24115
old locus tag: DMR_p2_00070
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIKNVTKTEVSKNVYSFKKDDMEMVKEGQWYETIQKMKKEGLFQDALTGMCFPISQMPKKSNYLGYYYFFQSMNRYSPFFEEAFDSCIFMLTEKGFEVTVCYAGENVEIFLEKGGVNNNAMEQLFVKDEISDDWLLIEKTIVPRQKVSCGSCCPR
SIO_010081: DMR_RS24115
subclass of: SO_0000673
so part of: DMR_RS24115
location: 6603..7070
location: region:6603-7070:1
so has part: feature:6603-7070:1:exon

WP_148208568.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6603-7070:1:exon

DMR_RS24835
type: Gene
subclass of: SO_0000704
RO_0002162: 573370
locus tag: DMR_RS24835
so part of: sequence
location: complement(7154..7360)
location: region:7154-7360:-1
so has part: feature:7154-7360:-1:exon
subclass of: SO_0000010

position:7154:-1
position: 7154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7360:-1
position: 7360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7154-7360:-1:exon

DMR_RS24835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573370
locus tag: DMR_RS24835
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDIRFCFCRICKHYRNDKTFTCTAFPDGIPKKILYAREFHFKNFHGDGGIKFEVIPEKENFLEFADME
SIO_010081: DMR_RS24835
subclass of: SO_0000673
so part of: DMR_RS24835
location: complement(7154..7360)
location: region:7154-7360:-1
so has part: feature:7154-7360:-1:exon

WP_148208569.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7154-7360:-1:exon

DMR_RS22190
type: Gene
subclass of: SO_0000704
RO_0002162: 573370
locus tag: DMR_RS22190
old locus tag: DMR_p2_00080
so part of: sequence
location: 7530..8213
location: region:7530-8213:1
so has part: feature:7530-8213:1:exon
subclass of: SO_0000010

position:7530:1
position: 7530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8213:1
position: 8213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7530-8213:1:exon

DMR_RS22190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573370
locus tag: DMR_RS22190
old locus tag: DMR_p2_00080
inference: COORDINATES: protein motif:HMM:NF012464.2
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MPKIIGYLRVSTDTQDVENQKHEIEAYASREGMTVDTWIQVEMSSRRSTRERRLDETLDLLKRGDSLIVSELSRIGRSIRENLNILHELGKKGVTTHIVKQGLRTNGKNDVLATMLLANVSFAAELERDLISQRTKAALARKKAEGKKLGSPMLDELHAQQSAAAKEFSETIRGELEALIQEGKSQRAIMDSLNEKGIRTIRGNRWSLPYLQATLKRLGLITRRTKT
SIO_010081: DMR_RS22190
subclass of: SO_0000673
so part of: DMR_RS22190
location: 7530..8213
location: region:7530-8213:1
so has part: feature:7530-8213:1:exon

WP_012749583.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7530-8213:1:exon

DMR_RS24120
type: Gene
subclass of: SO_0000704
RO_0002162: 573370
locus tag: DMR_RS24120
old locus tag: DMR_p2_00090
so part of: sequence
location: complement(8231..8515)
location: region:8231-8515:-1
so has part: feature:8231-8515:-1:exon
subclass of: SO_0000010

position:8231:-1
position: 8231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8515:-1
position: 8515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8231-8515:-1:exon

DMR_RS24120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573370
locus tag: DMR_RS24120
old locus tag: DMR_p2_00090
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007245247.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system RelE/ParE family toxin
translation: MHVKWLRTALKNLDDELEYIAREDHELAVKIYAHIQDAVDNLKQFPDSSRPGRIFGTRELVISRYNYLIPYRVREDVVEILRVFHTSRKQPIKW
SIO_010081: DMR_RS24120
subclass of: SO_0000673
so part of: DMR_RS24120
location: complement(8231..8515)
location: region:8231-8515:-1
so has part: feature:8231-8515:-1:exon

WP_012749584.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8231-8515:-1:exon

DMR_RS22195
type: Gene
subclass of: SO_0000704
RO_0002162: 573370
locus tag: DMR_RS22195
old locus tag: DMR_p2_00100
so part of: sequence
location: complement(8505..8750)
location: region:8505-8750:-1
so has part: feature:8505-8750:-1:exon
subclass of: SO_0000010

position:8505:-1
position: 8505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8750:-1
position: 8750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8505-8750:-1:exon

DMR_RS22195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573370
locus tag: DMR_RS22195
old locus tag: DMR_p2_00100
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007976777.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CopG family ribbon-helix-helix protein
translation: MNDKSMSLRLPKPLADQLGQLAESTGRTKSFLVIQALESFLERESWQVAEITKGLAEADAGDFSTPEEIQAMDRKWGYRAR
SIO_010081: DMR_RS22195
subclass of: SO_0000673
so part of: DMR_RS22195
location: complement(8505..8750)
location: region:8505-8750:-1
so has part: feature:8505-8750:-1:exon

WP_012749585.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8505-8750:-1:exon