Methanocaldococcus fervens AG86 plasmid pMEFER01, complete sequence.
type: Entry
definition: Methanocaldococcus fervens AG86 plasmid pMEFER01, complete sequence.
sequence version: NC_013157.1
sequence date: 2023-05-02
sequence: sequence
division: CON
label: NC_013157.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN02598490
keyword: RefSeq
source: Methanocaldococcus fervens AG86
organism: Methanocaldococcus fervens AG86
taxonomy: Archaea; Euryarchaeota; Methanomada group; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP001697.1.\nURL -- http://www.jgi.doe.gov\nJGI Project ID: 4085029\nSource DNA and organism available from William B. Whitman\n(whitman@uga.edu)\nContacts: William B. Whitman (whitman@uga.edu)\n David Bruce (microbe@cuba.jgi-psf.org)\nAnnotation done by JGI-ORNL and JGI-PGF\nFinishing done by JGI-LANL\nFinished microbial genomes have been curated to close all gaps with\ngreater than 98% coverage of at least two independent clones. Each\nbase pair has a minimum q (quality) value of 30 and the total error\nrate is less than one per 50000.\nThe JGI and collaborators endorse the principles for the\ndistribution and use of large scale sequencing data adopted by the\nlarger genome sequencing community and urge users of this data to\nfollow them. it is our intention to publish the work of this\nproject in a timely fashion and we welcome collaborative\ninteraction on the project and analysis.\n(http://www.genome.gov/page.cfm?pageID=10506376).\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Metadata-START##\nOrganism Display Name :: Methanocaldococcus fervens AG86\nCulture Collection ID :: DSM 4213\nGOLD Stamp ID :: Gi02047\nGreengenes ID :: 16\nIsolation Site :: Deep-sea hydrothermal chimney sample\n collected on the East Pacific Rise at a\n depth of 2600m\nDepth :: 2600m\nOxygen Requirement :: Anaerobe\nCell Shape :: Coccus-shaped\nMotility :: Motile\nSporulation :: Nonsporulating\nTemperature Range :: Thermophile\nTemperature Optimum :: 49 - 89C\npH :: 6.5\nGram Staining :: gram-\nBiotic Relationship :: Free living\nDiseases :: None\nHabitat :: Deep sea, Marine\nPhenotypes :: Methanogen, Piezophile\nEnergy Source :: Autotroph, Lithotroph\n##Metadata-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 05/02/2023 01:19:10\nAnnotatio…

sequence
subclass of: SO_0000155
sequence length: 22190
topology: circular
so has quality: SO_0000988
location: 1..22190
location: region:1-22190:1
RO_0002162: 573064

NC_013157
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN02598490
type: BioSample
SIO_000068: biosample

1
title: Complete sequence of plasmid of Methanocaldococcus fervens AG86
author: Lucas, S.
author: Copeland, A.
author: Lapidus, A.
author: Glavina del Rio, T.
author: Tice, H.
author: Bruce, D.
author: Goodwin, L.
author: Pitluck, S.
author: Chertkov, O.
author: Detter, J.C.
author: Han, C.
author: Tapia, R.
author: Larimer, F.
author: Land, M.
author: Hauser, L.
author: Kyrpides, N.
author: Ovchinnikova, G.
author: Lupa-Sieprawska, M.
author: Whitman, W.B.
journal: Unpublished

2
title: Direct Submission
author: Lucas, S.
author: Copeland, A.
author: Lapidus, A.
author: Glavina del Rio, T.
author: Tice, H.
author: Bruce, D.
author: Goodwin, L.
author: Pitluck, S.
author: Chertkov, O.
author: Detter, J.C.
author: Han, C.
author: Tapia, R.
author: Larimer, F.
author: Land, M.
author: Hauser, L.
author: Kyrpides, N.
author: Ovchinnikova, G.
author: Lupa-Sieprawska, M.
author: Whitman, W.B.
journal: Submitted (10-AUG-2009) US DOE Joint Genome Institute, 2800 Mitchell Drive B310, Walnut Creek, CA 94598-1698, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22190:1
position: 22190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-22190:1:source
so part of: sequence
organism: Methanocaldococcus fervens AG86
mol type: genomic DNA
strain: AG86
culture collection: DSM:4213
type material: type strain of Methanocaldococcus fervens
plasmid: pMEFER01

573064
type: Taxonomy
SIO_000068: taxonomy

MEFER_RS08005
type: Gene
subclass of: SO_0000704
RO_0002162: 573064
locus tag: MEFER_RS08005
old locus tag: Mefer_1586
so part of: sequence
location: complement(7..1350)
location: region:7-1350:-1
so has part: feature:7-1350:-1:exon
subclass of: SO_0000010

8366329
type: Gene
SIO_000068: ncbigene

position:7:-1
position: 7
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1350:-1
position: 1350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7-1350:-1:exon

MEFER_RS08005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573064
locus tag: MEFER_RS08005
old locus tag: Mefer_1586
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012980720.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding protein
translation: MEVQIYLGRGKALGWRKYGDRTLRKLSIKTEEANHTLFIGGSGFGKTTVMRGMIEAIWTAYTEKGIYPLIFVFERKIDVSKAEKIKEIYYIETQKYSRAECMKKYGEKTWKYIEWYVQQIKKYPHFYGSPGDFAMGMPNVLGKYTRFSGTHSILGYFGLEPKAYPVTRFVFRPRRPLNHIKADNGWKTEVVDAKIKYSSINYAFLENLTNVGTGTLHGERLKRIWDIEGIRDPDKVLEIALKHEKNPESPSRTYMRIEETMDRLKKDKLFSPDENFFKHITPKRINIIDFSQNSDLTHEEENLIFKMIVDWAIKVAFKYKIPVFFFIDEIQNFITNSHGKAAITKIYREGRSLGINLFGATQFLTGLDKILIDGAMHVAIVGKIVRLDDAKLLASMVPNLDIDDIMMEECNSIDEYLKIKQKNKFRGYFIYDKQFCERIAYRHPQSL
SIO_010081: MEFER_RS08005
subclass of: SO_0000673
so part of: MEFER_RS08005
location: complement(7..1350)
location: region:7-1350:-1
so has part: feature:7-1350:-1:exon

WP_048056480.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7-1350:-1:exon

MEFER_RS08010
type: Gene
subclass of: SO_0000704
RO_0002162: 573064
locus tag: MEFER_RS08010
old locus tag: Mefer_1587
so part of: sequence
location: complement(1494..2144)
location: region:1494-2144:-1
so has part: feature:1494-2144:-1:exon
subclass of: SO_0000010

8366295
type: Gene
SIO_000068: ncbigene

position:1494:-1
position: 1494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2144:-1
position: 2144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1494-2144:-1:exon

MEFER_RS08010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573064
locus tag: MEFER_RS08010
old locus tag: Mefer_1587
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012980721.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIQRIMAILILVLLSSAYANSIVVYNPETGTYYTCYPKNITANGKTVTYYILNISSATKEDNLTIIHKIIIENQTAVIVYDANMVKAYQALIAELQRNITRLQKELHKKNKELSELITYKKKNIELQKNISKLKNEITMLKAERDMLKEQNKQYRDLINDLIIKSSNSTLEESIEKEKAENKRWNAIFTALGIAVVGVCALGMILRRYIKRHECPL
SIO_010081: MEFER_RS08010
subclass of: SO_0000673
so part of: MEFER_RS08010
location: complement(1494..2144)
location: region:1494-2144:-1
so has part: feature:1494-2144:-1:exon

WP_012795034.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1494-2144:-1:exon

MEFER_RS08015
type: Gene
subclass of: SO_0000704
RO_0002162: 573064
locus tag: MEFER_RS08015
old locus tag: Mefer_1588
so part of: sequence
location: complement(2157..2618)
location: region:2157-2618:-1
so has part: feature:2157-2618:-1:exon
subclass of: SO_0000010

8366296
type: Gene
SIO_000068: ncbigene

position:2157:-1
position: 2157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2618:-1
position: 2618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2157-2618:-1:exon

MEFER_RS08015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573064
locus tag: MEFER_RS08015
old locus tag: Mefer_1588
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012980722.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKRILFFAFLITFLVSFAILEMQHSDEEIIKEKLLEFGYPPKGYVIINNTIRYSDGSFVVLSTPPKKYPVSAFDAYKKAKEYLEKKEKEYGLDKYNYHLHIKAEDIEEYSENGNYYWAFKLYFGKGHSAGDLMGYILVSRDNGYCKIKGLFGG
SIO_010081: MEFER_RS08015
subclass of: SO_0000673
so part of: MEFER_RS08015
location: complement(2157..2618)
location: region:2157-2618:-1
so has part: feature:2157-2618:-1:exon

WP_012795035.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2157-2618:-1:exon

MEFER_RS08020
type: Gene
subclass of: SO_0000704
RO_0002162: 573064
locus tag: MEFER_RS08020
old locus tag: Mefer_1589
so part of: sequence
location: complement(2627..3124)
location: region:2627-3124:-1
so has part: feature:2627-3124:-1:exon
subclass of: SO_0000010

8366297
type: Gene
SIO_000068: ncbigene

position:2627:-1
position: 2627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3124:-1
position: 3124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2627-3124:-1:exon

MEFER_RS08020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573064
locus tag: MEFER_RS08020
old locus tag: Mefer_1589
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012980723.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MERNITIGLIIAFILVVAGAFLMHKDSGNGGFLLDFLKNHTENTTTADNSTINGTINETATNITDNSTGIEEISFDASAVYGNATNAVLISINAKENITVDLIQVFASFNNINFTKVKEVSNITLPTVVEVPANENATVMYYYLDIMYNGTEYRIPSEGAYNITT
SIO_010081: MEFER_RS08020
subclass of: SO_0000673
so part of: MEFER_RS08020
location: complement(2627..3124)
location: region:2627-3124:-1
so has part: feature:2627-3124:-1:exon

WP_012795036.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2627-3124:-1:exon

MEFER_RS08025
type: Gene
subclass of: SO_0000704
RO_0002162: 573064
locus tag: MEFER_RS08025
old locus tag: Mefer_1590
so part of: sequence
location: complement(3130..3381)
location: region:3130-3381:-1
so has part: feature:3130-3381:-1:exon
subclass of: SO_0000010

8366298
type: Gene
SIO_000068: ncbigene

position:3130:-1
position: 3130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3381:-1
position: 3381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3130-3381:-1:exon

MEFER_RS08025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573064
locus tag: MEFER_RS08025
old locus tag: Mefer_1590
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSEKNHKYMDSFEEEELPTFFPRLCFKYADEYLAEDIIMLGKILKKAGNLNSKEIRDKLKENVLKLLDELVNKALEEETKNKR
SIO_010081: MEFER_RS08025
subclass of: SO_0000673
so part of: MEFER_RS08025
location: complement(3130..3381)
location: region:3130-3381:-1
so has part: feature:3130-3381:-1:exon

WP_012795037.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3130-3381:-1:exon

MEFER_RS08380
type: Gene
subclass of: SO_0000704
RO_0002162: 573064
locus tag: MEFER_RS08380
old locus tag: Mefer_1591
so part of: sequence
location: complement(3384..3536)
location: region:3384-3536:-1
so has part: feature:3384-3536:-1:exon
subclass of: SO_0000010

43321641
type: Gene
SIO_000068: ncbigene

position:3384:-1
position: 3384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3536:-1
position: 3536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3384-3536:-1:exon

MEFER_RS08380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573064
locus tag: MEFER_RS08380
old locus tag: Mefer_1591
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MANGETLYTFSLGKGEYTRIVKGNKKGQYKLVKFKAKSKSKKSSKKKKRS
SIO_010081: MEFER_RS08380
subclass of: SO_0000673
so part of: MEFER_RS08380
location: complement(3384..3536)
location: region:3384-3536:-1
so has part: feature:3384-3536:-1:exon

WP_012795038.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3384-3536:-1:exon

MEFER_RS08030
type: Gene
subclass of: SO_0000704
RO_0002162: 573064
locus tag: MEFER_RS08030
old locus tag: Mefer_1592
so part of: sequence
location: complement(3538..3819)
location: region:3538-3819:-1
so has part: feature:3538-3819:-1:exon
subclass of: SO_0000010

8366300
type: Gene
SIO_000068: ncbigene

position:3538:-1
position: 3538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3819:-1
position: 3819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3538-3819:-1:exon

MEFER_RS08030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573064
locus tag: MEFER_RS08030
old locus tag: Mefer_1592
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013798663.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDVSSIFSLLQQHWFEILVVLAIAFFLRNLKWILIASVIFLALMHFGYLETIKELILSHIPINSHAIPLNLLNDLINNSTNSTVNETINITGG
SIO_010081: MEFER_RS08030
subclass of: SO_0000673
so part of: MEFER_RS08030
location: complement(3538..3819)
location: region:3538-3819:-1
so has part: feature:3538-3819:-1:exon

WP_012795039.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3538-3819:-1:exon

MEFER_RS08035
type: Gene
subclass of: SO_0000704
RO_0002162: 573064
locus tag: MEFER_RS08035
old locus tag: Mefer_1593
so part of: sequence
location: complement(3830..4159)
location: region:3830-4159:-1
so has part: feature:3830-4159:-1:exon
subclass of: SO_0000010

8366301
type: Gene
SIO_000068: ncbigene

position:3830:-1
position: 3830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4159:-1
position: 4159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3830-4159:-1:exon

MEFER_RS08035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573064
locus tag: MEFER_RS08035
old locus tag: Mefer_1593
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012980726.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVIQQIIASILTFLLCFAYKNQIEQIGHILDINNDVLAWGVPTFIILLCVWKIASRDWGLGDAVAVIILSILIMLYYTQDVGRIILEVSKIMLGIGAGVIIGYLAKGDD
SIO_010081: MEFER_RS08035
subclass of: SO_0000673
so part of: MEFER_RS08035
location: complement(3830..4159)
location: region:3830-4159:-1
so has part: feature:3830-4159:-1:exon

WP_012795040.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3830-4159:-1:exon

MEFER_RS08040
type: Gene
subclass of: SO_0000704
RO_0002162: 573064
locus tag: MEFER_RS08040
old locus tag: Mefer_1594
so part of: sequence
location: complement(4175..4681)
location: region:4175-4681:-1
so has part: feature:4175-4681:-1:exon
subclass of: SO_0000010

8366302
type: Gene
SIO_000068: ncbigene

position:4175:-1
position: 4175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4681:-1
position: 4681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4175-4681:-1:exon

MEFER_RS08040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573064
locus tag: MEFER_RS08040
old locus tag: Mefer_1594
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013180903.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MANGANEKTDFKLKLLKAVAFSIGMGAVFYYGAQQSVTFNEVVSAFASVPLLVIIVVELLDKAVDSMEVFNQLYSTYGGKSEYGKYAMTFIGMLIAFFGMLWLVSGTITLNVGSMSPANLVVAALLSLYILAPETGDDELILFAWLGATIATFGKYLTLIPHIPGLTT
SIO_010081: MEFER_RS08040
subclass of: SO_0000673
so part of: MEFER_RS08040
location: complement(4175..4681)
location: region:4175-4681:-1
so has part: feature:4175-4681:-1:exon

WP_012795041.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4175-4681:-1:exon

MEFER_RS08045
type: Gene
subclass of: SO_0000704
RO_0002162: 573064
locus tag: MEFER_RS08045
old locus tag: Mefer_1595
so part of: sequence
location: complement(4732..6681)
location: region:4732-6681:-1
so has part: feature:4732-6681:-1:exon
subclass of: SO_0000010

8366303
type: Gene
SIO_000068: ncbigene

position:4732:-1
position: 4732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6681:-1
position: 6681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4732-6681:-1:exon

MEFER_RS08045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573064
locus tag: MEFER_RS08045
old locus tag: Mefer_1595
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFFNFFKKKLKSKRGILPIVAAVVAGAIIAGVAIDYFSDGELDLNTSKEAAVVDTGAEKVTNLTKASDYRYKYLAGYKVYSENASAADLNEIKYKLKSSLVSYETQNSGSITDLDVKLKGADKIYGFSVFPVQIILTESIPSSLPQQSYVEINSIKVYLVDSDGRKWSEKDFTDTLIFRDPNAHTDEPDGEEQYDPDSYLTKYELNLTLKTPDPYLGKARLAAQGSADLKTLRELMNATVKKFQVVVEIEGEAKLYKWEEVEVDTDGDGKPDTTEWRAEYDKTVPIDIKMVSLSAWNHINNGAYHVDGAEGSLPTAYSNVDELIAYATDVNGAVSNFVGRVWATPCHVYQSTAQYRFCLIGEPDNLEPVPVTISDDYASIGMRIRADGVGSIGDLSKGSFGEMGIRKDETILSLYYTKENDTVGYEVYFVLFGQVEDECGSEPIWLVIKPHIAVLDNIKLAGNDERMKEIESLLSDGKVSTEDIQLIQQKADMMINELMEKKAQVEASLDRYKTNEKAYEDAKKAISCYEKAIDYLKDMKSTADPNMIRTDFYLAQNYEMEGDYYRQAAEYRLIGLDNQAEALEGQAGKIHEDSAKYEPSMWFSAGSTLGNIWQQFKAGLGIDWVPDWVLILVVVILVVGGAIIVLKLL
SIO_010081: MEFER_RS08045
subclass of: SO_0000673
so part of: MEFER_RS08045
location: complement(4732..6681)
location: region:4732-6681:-1
so has part: feature:4732-6681:-1:exon

WP_012795042.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4732-6681:-1:exon

MEFER_RS08050
type: Gene
subclass of: SO_0000704
RO_0002162: 573064
locus tag: MEFER_RS08050
old locus tag: Mefer_1596
so part of: sequence
location: complement(6724..8574)
location: region:6724-8574:-1
so has part: feature:6724-8574:-1:exon
subclass of: SO_0000010

8366304
type: Gene
SIO_000068: ncbigene

position:6724:-1
position: 6724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8574:-1
position: 8574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6724-8574:-1:exon

MEFER_RS08050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573064
locus tag: MEFER_RS08050
old locus tag: Mefer_1596
inference: COORDINATES: protein motif:HMM:NF019911.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PEGA domain-containing protein
translation: MKNLVLLLFSVFVVMAVNVVSAEEYMVKIDGLSDSDIQYVLNSTSWKYYTPQYSLGNVITFPTEDDFARFLLPYDGSNFAFSPDLYSVSKQATVFKVSATLVGNDDVYKTIELNLSGPGYVYILSDLQLDLSAYDWASHCWIYDGDTLLLQDKSGFYKKLVTSGKLKVVMKDHGAAQASKFNIAIVFIDNNFTITRTDGLNCMKIDFKVIPQPILEIYSQPNANIYIDNELKGKTDNGGYFKTQVIGGEHELKISKDGFWDYTTTINIQNDTEIHVNLVPKNAIFGVTYKLEDNAYPDSIAKLSLKLSPIEDAYGTRMRISGVDVIKVLYNGQELEKSDDGSYILGDISKEVELEIQFKTPSSWGEHSFTIGLEASDVEGNLYSQQETITYEVLELPFLLELPEWKIGDNTVRVTDTTGQSYAVLLVLHDKDGNEVWSESKTLLEYGSAEFNVKIPSAGDYVLEIQGNGAKTYKEIHIVEPITLITKEVKAGKGQVATVKFSIVNPSSKVKYYYATLESGLLNLSINKTFAVSPNENKTVEISFEVPKNAIFDSYQLILKVYDSETDGLLFEGNVVLKIVENTIPIAIGDSSIPLWLIAIVGVLLVGGIAYALIRK
SIO_010081: MEFER_RS08050
subclass of: SO_0000673
so part of: MEFER_RS08050
location: complement(6724..8574)
location: region:6724-8574:-1
so has part: feature:6724-8574:-1:exon

WP_012795043.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6724-8574:-1:exon

MEFER_RS08055
type: Gene
subclass of: SO_0000704
RO_0002162: 573064
locus tag: MEFER_RS08055
old locus tag: Mefer_1597
so part of: sequence
location: complement(8580..8900)
location: region:8580-8900:-1
so has part: feature:8580-8900:-1:exon
subclass of: SO_0000010

8366305
type: Gene
SIO_000068: ncbigene

position:8580:-1
position: 8580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8900:-1
position: 8900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8580-8900:-1:exon

MEFER_RS08055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573064
locus tag: MEFER_RS08055
old locus tag: Mefer_1597
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010885284.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRALSIIQILLFFAVSFYLVYKGIILTEYLVFGVIFGLLIHWSLTNKGNKNIVNIKPLSASFRVLLYDVYLVTLLIRGFLEGFSQDLTFLCVILVGLIILDYFVEG
SIO_010081: MEFER_RS08055
subclass of: SO_0000673
so part of: MEFER_RS08055
location: complement(8580..8900)
location: region:8580-8900:-1
so has part: feature:8580-8900:-1:exon

WP_012795044.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8580-8900:-1:exon

MEFER_RS08060
type: Gene
subclass of: SO_0000704
RO_0002162: 573064
locus tag: MEFER_RS08060
old locus tag: Mefer_1598
so part of: sequence
location: complement(8903..9235)
location: region:8903-9235:-1
so has part: feature:8903-9235:-1:exon
subclass of: SO_0000010

8366306
type: Gene
SIO_000068: ncbigene

position:8903:-1
position: 8903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9235:-1
position: 9235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8903-9235:-1:exon

MEFER_RS08060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573064
locus tag: MEFER_RS08060
old locus tag: Mefer_1598
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012980731.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVYVHICPHCLNPVVCFQKDYLEGEVKAVNVDLENSKCHVLLGSSIYKNASCSNMQQLKTFAGMIAKKMNLDDEKKQKFMDKVVELKRTYRNWKDYKILEVALNSILQGG
SIO_010081: MEFER_RS08060
subclass of: SO_0000673
so part of: MEFER_RS08060
location: complement(8903..9235)
location: region:8903-9235:-1
so has part: feature:8903-9235:-1:exon

WP_012795045.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8903-9235:-1:exon

MEFER_RS08065
type: Gene
subclass of: SO_0000704
RO_0002162: 573064
locus tag: MEFER_RS08065
old locus tag: Mefer_1599
so part of: sequence
location: complement(9482..9688)
location: region:9482-9688:-1
so has part: feature:9482-9688:-1:exon
subclass of: SO_0000010

8366307
type: Gene
SIO_000068: ncbigene

position:9482:-1
position: 9482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9688:-1
position: 9688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9482-9688:-1:exon

MEFER_RS08065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573064
locus tag: MEFER_RS08065
old locus tag: Mefer_1599
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAKKNHAFYAKNLNEEEKAMIDIVKALIGADNKGLLIKGIRALIRERNLENEVERLLEERKKLIKNVA
SIO_010081: MEFER_RS08065
subclass of: SO_0000673
so part of: MEFER_RS08065
location: complement(9482..9688)
location: region:9482-9688:-1
so has part: feature:9482-9688:-1:exon

WP_012795046.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9482-9688:-1:exon

MEFER_RS08070
type: Gene
subclass of: SO_0000704
RO_0002162: 573064
locus tag: MEFER_RS08070
old locus tag: Mefer_1600
so part of: sequence
location: complement(9702..9923)
location: region:9702-9923:-1
so has part: feature:9702-9923:-1:exon
subclass of: SO_0000010

8366308
type: Gene
SIO_000068: ncbigene

position:9702:-1
position: 9702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9923:-1
position: 9923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9702-9923:-1:exon

MEFER_RS08070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573064
locus tag: MEFER_RS08070
old locus tag: Mefer_1600
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEITVSANNIDNILLYLDNLKAEKAELLKELERRRRQKRLINEEIKRLNKEIKRIDDELKNWRKQLKGLVRRK
SIO_010081: MEFER_RS08070
subclass of: SO_0000673
so part of: MEFER_RS08070
location: complement(9702..9923)
location: region:9702-9923:-1
so has part: feature:9702-9923:-1:exon

WP_048056481.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9702-9923:-1:exon

MEFER_RS08075
type: Gene
subclass of: SO_0000704
RO_0002162: 573064
locus tag: MEFER_RS08075
old locus tag: Mefer_1601
so part of: sequence
location: complement(9898..10122)
location: region:9898-10122:-1
so has part: feature:9898-10122:-1:exon
subclass of: SO_0000010

8366309
type: Gene
SIO_000068: ncbigene

position:9898:-1
position: 9898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10122:-1
position: 10122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9898-10122:-1:exon

MEFER_RS08075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573064
locus tag: MEFER_RS08075
old locus tag: Mefer_1601
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MERDEVIYEKEVNMEGYFRRLRVIKESEDVFLIEEVEKGIIVDNHDMVVLTKEELKEIYKRVFGDDYGNNSKCK
SIO_010081: MEFER_RS08075
subclass of: SO_0000673
so part of: MEFER_RS08075
location: complement(9898..10122)
location: region:9898-10122:-1
so has part: feature:9898-10122:-1:exon

WP_048056482.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9898-10122:-1:exon

MEFER_RS08080
type: Gene
subclass of: SO_0000704
RO_0002162: 573064
locus tag: MEFER_RS08080
old locus tag: Mefer_1602
so part of: sequence
location: complement(10128..10511)
location: region:10128-10511:-1
so has part: feature:10128-10511:-1:exon
subclass of: SO_0000010

8366310
type: Gene
SIO_000068: ncbigene

position:10128:-1
position: 10128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10511:-1
position: 10511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10128-10511:-1:exon

MEFER_RS08080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573064
locus tag: MEFER_RS08080
old locus tag: Mefer_1602
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEIEITHKKGVKSVEKNELEELKDKLIDRLGYDRYKEELGAVNKLFCGILTEMGAVKVLAKLVERGELPSELLKEQKDEENKKNDSWGDEDEEICPRCGGTLEEICDGEGRVIELYCEDCGYKEIIR
SIO_010081: MEFER_RS08080
subclass of: SO_0000673
so part of: MEFER_RS08080
location: complement(10128..10511)
location: region:10128-10511:-1
so has part: feature:10128-10511:-1:exon

WP_012795049.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10128-10511:-1:exon

MEFER_RS08085
type: Gene
subclass of: SO_0000704
RO_0002162: 573064
locus tag: MEFER_RS08085
old locus tag: Mefer_1603
so part of: sequence
location: complement(10562..10894)
location: region:10562-10894:-1
so has part: feature:10562-10894:-1:exon
subclass of: SO_0000010

8366311
type: Gene
SIO_000068: ncbigene

position:10562:-1
position: 10562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10894:-1
position: 10894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10562-10894:-1:exon

MEFER_RS08085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573064
locus tag: MEFER_RS08085
old locus tag: Mefer_1603
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010869854.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLRIKKTPDEIKEMIRLAIQKGYKQIKVSDVNPNEVLLRIPGTFKITSFEFLSDREIKYSCFENYSFKCIIETEVGEVRKFLESVYENSKDIGRKGIREIPADVFQVVVA
SIO_010081: MEFER_RS08085
subclass of: SO_0000673
so part of: MEFER_RS08085
location: complement(10562..10894)
location: region:10562-10894:-1
so has part: feature:10562-10894:-1:exon

WP_012795050.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10562-10894:-1:exon

MEFER_RS08090
type: Gene
subclass of: SO_0000704
RO_0002162: 573064
locus tag: MEFER_RS08090
old locus tag: Mefer_1605
so part of: sequence
location: complement(11067..11327)
location: region:11067-11327:-1
so has part: feature:11067-11327:-1:exon
subclass of: SO_0000010

8366313
type: Gene
SIO_000068: ncbigene

position:11067:-1
position: 11067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11327:-1
position: 11327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11067-11327:-1:exon

MEFER_RS08090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573064
locus tag: MEFER_RS08090
old locus tag: Mefer_1605
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPYVQCCYYCKNVFRCPKRCPNDLYRCQFCAWHVEEPCKDFEEVKYEEIEELVKKVFGRFFEELKKNKMEEAVEILYYDIVRTILP
SIO_010081: MEFER_RS08090
subclass of: SO_0000673
so part of: MEFER_RS08090
location: complement(11067..11327)
location: region:11067-11327:-1
so has part: feature:11067-11327:-1:exon

WP_012795052.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11067-11327:-1:exon

MEFER_RS08095
type: Gene
subclass of: SO_0000704
RO_0002162: 573064
locus tag: MEFER_RS08095
old locus tag: Mefer_1606
so part of: sequence
location: complement(11380..11907)
location: region:11380-11907:-1
so has part: feature:11380-11907:-1:exon
subclass of: SO_0000010

8366314
type: Gene
SIO_000068: ncbigene

position:11380:-1
position: 11380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11907:-1
position: 11907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11380-11907:-1:exon

MEFER_RS08095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573064
locus tag: MEFER_RS08095
old locus tag: Mefer_1606
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIFKVRKGSELEREIEAYFEGRRKYIENIVKICKKYGFKDITKDDVYFTNDFFGKLEFYGVGVKGDIPSNGWRRKDNYFVPNKKSKLGKEIVLEIKNVQCPDVKEIMKLMGMDVSYLIEGKGWMWFRPSLEKIGDTWIIHISDKLIGKFYPKTDDVEEITVKEYLEMKERLGGCP
SIO_010081: MEFER_RS08095
subclass of: SO_0000673
so part of: MEFER_RS08095
location: complement(11380..11907)
location: region:11380-11907:-1
so has part: feature:11380-11907:-1:exon

WP_012795053.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11380-11907:-1:exon

MEFER_RS08385
type: Gene
subclass of: SO_0000704
RO_0002162: 573064
locus tag: MEFER_RS08385
old locus tag: Mefer_1607
so part of: sequence
location: complement(11982..12143)
location: region:11982-12143:-1
so has part: feature:11982-12143:-1:exon
subclass of: SO_0000010

43321642
type: Gene
SIO_000068: ncbigene

position:11982:-1
position: 11982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12143:-1
position: 12143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11982-12143:-1:exon

MEFER_RS08385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573064
locus tag: MEFER_RS08385
old locus tag: Mefer_1607
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAEINSTKVKVLARNIVRFTNMLDNNHIGKGAYRITIEALLNEIKHEISKLPK
SIO_010081: MEFER_RS08385
subclass of: SO_0000673
so part of: MEFER_RS08385
location: complement(11982..12143)
location: region:11982-12143:-1
so has part: feature:11982-12143:-1:exon

WP_012795054.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11982-12143:-1:exon

MEFER_RS08100
type: Gene
subclass of: SO_0000704
RO_0002162: 573064
locus tag: MEFER_RS08100
old locus tag: Mefer_1608
so part of: sequence
location: complement(12208..12447)
location: region:12208-12447:-1
so has part: feature:12208-12447:-1:exon
subclass of: SO_0000010

8366316
type: Gene
SIO_000068: ncbigene

position:12208:-1
position: 12208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12447:-1
position: 12447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12208-12447:-1:exon

MEFER_RS08100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573064
locus tag: MEFER_RS08100
old locus tag: Mefer_1608
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFIKRELEGDNVRLKKQTYAVILSYNEYFDVRHGNALDVLKKKLEESGYTTDNLVGAFVVGMERFGEGYVLRFIPQLDQ
SIO_010081: MEFER_RS08100
subclass of: SO_0000673
so part of: MEFER_RS08100
location: complement(12208..12447)
location: region:12208-12447:-1
so has part: feature:12208-12447:-1:exon

WP_157200704.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12208-12447:-1:exon

MEFER_RS08390
type: Gene
subclass of: SO_0000704
RO_0002162: 573064
locus tag: MEFER_RS08390
old locus tag: Mefer_1609
so part of: sequence
location: 12706..12876
location: region:12706-12876:1
so has part: feature:12706-12876:1:exon
subclass of: SO_0000010

43321643
type: Gene
SIO_000068: ncbigene

position:12706:1
position: 12706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12876:1
position: 12876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12706-12876:1:exon

MEFER_RS08390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573064
locus tag: MEFER_RS08390
old locus tag: Mefer_1609
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNAIDIKKELTRIDVICDELLELETTKRVKKIRDGLLKIKEIVKRVEDKEICECSE
SIO_010081: MEFER_RS08390
subclass of: SO_0000673
so part of: MEFER_RS08390
location: 12706..12876
location: region:12706-12876:1
so has part: feature:12706-12876:1:exon

WP_012795056.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12706-12876:1:exon

MEFER_RS08105
type: Gene
subclass of: SO_0000704
RO_0002162: 573064
locus tag: MEFER_RS08105
old locus tag: Mefer_1610
so part of: sequence
location: 13507..15765
location: region:13507-15765:1
so has part: feature:13507-15765:1:exon
subclass of: SO_0000010

8366318
type: Gene
SIO_000068: ncbigene

position:13507:1
position: 13507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15765:1
position: 15765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13507-15765:1:exon

MEFER_RS08105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573064
locus tag: MEFER_RS08105
old locus tag: Mefer_1610
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015732841.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: minichromosome maintenance protein MCM
translation: MGIREAKIRIVKLLQAAPNKSLPWNAIKALLECYHPTSTIYDAKNELIEEGIIKEEGKKGEKTIVLIKESDSNVDIGFGFSSFDDEIIFEEVRGYLVNYFRNIHKEDIICKNNFVVIDLNHLYSCGLMEFVEFVVNNPERGLKFLKECYEEAYYSLNVEYLPEDFTLTVKNIPKALRVINTIEEIRKSHKGKLIEFEGIIAVASKVKGYTEKKCFVCQKCGYEWLAENNLFDPIKIKKCPRCGGDVVYNEEKSIDIDIQELKVQQPLEQMKNPDENPKYITVILKNSPGIYSGRVRIVGVVRTYKSTKKNIDVKDYYVEGWYVEKVDENENISISEEDKRLFEKLAKRKDVIDLLSDRLIPEIKGHEHVKKAIFLQQVKGTKKRSGRRHNIHILLVADPGVGKTQMLRRIAKIPGNVYSSVTTATAVGLTAAVEREKTEIGDNTWVVKPGVLVKANGGTACIDELDKKKDVHTAVLEAVESQTIHVNKGGINAKLPAECAVLAACNPKWGKFNPDVSIAEQINIYTALLDRFDLIFPIRNVSDKDRDREIADHITSLAIYDSIDEEVEGYDYITVEVDGEEIKIDFDFVVKYIMYARQKKAILSKEAKEVLDDWYVEMRKKHEITARQLEGAVRLAEAHAKARLKDIVEVEDAEEAITMITECLKEIAYDPETGIFDVDKILGMSKKERDKLSMVYEIIKKLAEKSELVEHEDVVKEVEKRGLGEKELKQIIDKLKKYGEIDEPRPGRYRLI
SIO_010081: MEFER_RS08105
subclass of: SO_0000673
so part of: MEFER_RS08105
location: 13507..15765
location: region:13507-15765:1
so has part: feature:13507-15765:1:exon

WP_083767098.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13507-15765:1:exon

MEFER_RS08110
type: Gene
subclass of: SO_0000704
RO_0002162: 573064
locus tag: MEFER_RS08110
old locus tag: Mefer_1611
so part of: sequence
location: 15777..17150
location: region:15777-17150:1
so has part: feature:15777-17150:1:exon
subclass of: SO_0000010

8366319
type: Gene
SIO_000068: ncbigene

position:15777:1
position: 15777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17150:1
position: 17150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15777-17150:1:exon

MEFER_RS08110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573064
locus tag: MEFER_RS08110
old locus tag: Mefer_1611
EC number: 3.1.21.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012980695.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004519 - endonuclease activity [Evidence IEA]
GO process: GO:0009307 - DNA restriction-modification system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: restriction endonuclease
translation: MDKAKRGRYFDLDALNGYEFEEFVARLLRMMGYEDVQVTQRTGDKGKDIIAYSNHGKPFKYKVIVECKHTKSVGRPVIQKLQGALLHELGDDPYIKGIIVTSGKFTKEAIEYTEEINKKHGSWMEIELIDGRKLYELCKKHGIKIVSGNIQVVSDITFKHLPKEEVKKRTIGELETIKGIEKTTYQVKTWKSYYPYYCVRYSVHSQVCTKVGCIYEVNVDDELLFVDGVTGKVLDNLPHGFFKFSPENLTKIPEDEKNLIRPFNFSVDELEQKVIDSIINKYTKEVVYRGKNNVEYRKVCSPKKKDILIKESCPIYLPQYTNSIKIQETNYNQSIVANERDIFKISDDLAFCKVCGETIPIGERYVCPVCGKVLGPCHVIFDYLDGTPVCPDHAVPRKLYLQTIYFASKENLEKFNNMWATMSEWERITTDTTLMKVLIVIGFVMLLYLIKILGGLF
SIO_010081: MEFER_RS08110
subclass of: SO_0000673
so part of: MEFER_RS08110
location: 15777..17150
location: region:15777-17150:1
so has part: feature:15777-17150:1:exon

WP_012795058.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15777-17150:1:exon

MEFER_RS08395
type: Gene
subclass of: SO_0000704
RO_0002162: 573064
locus tag: MEFER_RS08395
so part of: sequence
location: 17210..17719
location: region:17210-17719:1
so has part: feature:17210-17719:1:exon
subclass of: SO_0000010

43321644
type: Gene
SIO_000068: ncbigene

position:17210:1
position: 17210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17719:1
position: 17719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17210-17719:1:exon

MEFER_RS08395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573064
locus tag: MEFER_RS08395
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRIATSNSVWIGIIILVIVTFAPGIWFLMHYKSYKVLQIGSYSLSVSYQTNPLMFYAGVFLISFGIISILWAGYIYNNIKNNLIEYFSICPICKSPNTLGKISFSMTIDDVQTVACQNCGAKWKIKTSGATGNIKTVKLVKPSDDGRGQEYLSKETDPEFWASLAREKE
SIO_010081: MEFER_RS08395
subclass of: SO_0000673
so part of: MEFER_RS08395
location: 17210..17719
location: region:17210-17719:1
so has part: feature:17210-17719:1:exon

WP_048056483.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17210-17719:1:exon

MEFER_RS08120
type: Gene
subclass of: SO_0000704
RO_0002162: 573064
locus tag: MEFER_RS08120
old locus tag: Mefer_1613
so part of: sequence
location: 17758..18198
location: region:17758-18198:1
so has part: feature:17758-18198:1:exon
subclass of: SO_0000010

8366321
type: Gene
SIO_000068: ncbigene

position:17758:1
position: 17758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18198:1
position: 18198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17758-18198:1:exon

MEFER_RS08120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573064
locus tag: MEFER_RS08120
old locus tag: Mefer_1613
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010870057.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acylphosphatase
translation: MSTTYELRIYGKVQHVGFRDRIEHIGRGLGISGVVYNHKDGTVRILANFDDEEIKELFKKSIKALEKKDKLIKIEKIEEKELNAYIEFPEGISRLSSDDILELNKKLDVGVEYIKMIFEKLDTIDKKLDDKFDTMVEILKEIRDKL
SIO_010081: MEFER_RS08120
subclass of: SO_0000673
so part of: MEFER_RS08120
location: 17758..18198
location: region:17758-18198:1
so has part: feature:17758-18198:1:exon

WP_048056484.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17758-18198:1:exon

MEFER_RS08125
type: Gene
subclass of: SO_0000704
RO_0002162: 573064
locus tag: MEFER_RS08125
old locus tag: Mefer_1614
so part of: sequence
location: 18344..18859
location: region:18344-18859:1
so has part: feature:18344-18859:1:exon
subclass of: SO_0000010

8366322
type: Gene
SIO_000068: ncbigene

position:18344:1
position: 18344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18859:1
position: 18859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18344-18859:1:exon

MEFER_RS08125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573064
locus tag: MEFER_RS08125
old locus tag: Mefer_1614
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: winged helix-turn-helix domain-containing protein
translation: MFRKLFIKYLGIDEYAKQIEELRDWKERNDLELKRLKEEVENLKKVNNSILEEVGNLRGELINVTNELSELKGGIDEINEIINKLKEIENRLLDLEKFTSGMYWNKKSAGGNLEDRIIGILSLRNSMCITELRDELGISVRTLYDVLSKMESSGKIERRKVGRKVYVRLKV
SIO_010081: MEFER_RS08125
subclass of: SO_0000673
so part of: MEFER_RS08125
location: 18344..18859
location: region:18344-18859:1
so has part: feature:18344-18859:1:exon

WP_012795061.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18344-18859:1:exon

MEFER_RS08130
type: Gene
subclass of: SO_0000704
RO_0002162: 573064
locus tag: MEFER_RS08130
old locus tag: Mefer_1615
so part of: sequence
location: complement(19169..19711)
location: region:19169-19711:-1
so has part: feature:19169-19711:-1:exon
subclass of: SO_0000010

8366323
type: Gene
SIO_000068: ncbigene

position:19169:-1
position: 19169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19711:-1
position: 19711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19169-19711:-1:exon

MEFER_RS08130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573064
locus tag: MEFER_RS08130
old locus tag: Mefer_1615
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013798675.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MIEINKIVSWKEIEKIKEMAKKDVIIVRMPKSVYNHKKMKYKIEALKEIPTIVINVEEKQRGRKKKIQNDILEKAIELINNNYSIRETANELGIPKSTLWLYIKDIAKNAKMRLFKKLVLEYKEQLIKKGLYNGTIDMLFAELEMHLKLNDLEKAKNILTEIIMYVNDDLDEDEDDEEEY
SIO_010081: MEFER_RS08130
subclass of: SO_0000673
so part of: MEFER_RS08130
location: complement(19169..19711)
location: region:19169-19711:-1
so has part: feature:19169-19711:-1:exon

WP_012795062.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19169-19711:-1:exon

MEFER_RS08135
type: Gene
subclass of: SO_0000704
RO_0002162: 573064
locus tag: MEFER_RS08135
old locus tag: Mefer_1616
so part of: sequence
location: complement(19718..20269)
location: region:19718-20269:-1
so has part: feature:19718-20269:-1:exon
subclass of: SO_0000010

8366324
type: Gene
SIO_000068: ncbigene

position:19718:-1
position: 19718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20269:-1
position: 20269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19718-20269:-1:exon

MEFER_RS08135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573064
locus tag: MEFER_RS08135
old locus tag: Mefer_1616
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013798674.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
translation: MKAKWDKELDYEETKKELLNRLNYYRNKKPLYQKDKIAYTYILTGLLQLRNGCRIGEAVEGLIKIIQTNKREVKVRVEKRKDDAKRLIVLPDEITIEDLENIKEVVEEWEGKNLRRIANNMSKWFITNLGINTHSLRYAYISYLGKQNVPAQLIACITGHATLDMVLRYTQVRTAEEILKKWG
SIO_010081: MEFER_RS08135
subclass of: SO_0000673
so part of: MEFER_RS08135
location: complement(19718..20269)
location: region:19718-20269:-1
so has part: feature:19718-20269:-1:exon

WP_012795063.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19718-20269:-1:exon

MEFER_RS08140
type: Gene
subclass of: SO_0000704
RO_0002162: 573064
locus tag: MEFER_RS08140
old locus tag: Mefer_1617
so part of: sequence
location: complement(20369..20548)
location: region:20369-20548:-1
so has part: feature:20369-20548:-1:exon
subclass of: SO_0000010

8366325
type: Gene
SIO_000068: ncbigene

position:20369:-1
position: 20369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20548:-1
position: 20548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20369-20548:-1:exon

MEFER_RS08140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573064
locus tag: MEFER_RS08140
old locus tag: Mefer_1617
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLFKTNDVMIVIKDGTNEEEIGFNIINDGEDCIFEITKEEAEKLKEKLEKALKQLDNSN
SIO_010081: MEFER_RS08140
subclass of: SO_0000673
so part of: MEFER_RS08140
location: complement(20369..20548)
location: region:20369-20548:-1
so has part: feature:20369-20548:-1:exon

WP_012795064.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20369-20548:-1:exon

MEFER_RS08145
type: Gene
subclass of: SO_0000704
RO_0002162: 573064
locus tag: MEFER_RS08145
old locus tag: Mefer_1618
so part of: sequence
location: complement(20620..21072)
location: region:20620-21072:-1
so has part: feature:20620-21072:-1:exon
subclass of: SO_0000010

8366326
type: Gene
SIO_000068: ncbigene

position:20620:-1
position: 20620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21072:-1
position: 21072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20620-21072:-1:exon

MEFER_RS08145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573064
locus tag: MEFER_RS08145
old locus tag: Mefer_1618
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012980717.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGFLSILKRNRQEYNQIPEMSIQPDFEMKYKSLLEDIGLLVKDLKREFEKHSYYLALNKLLYSGGIEKAEIFIDYHAGRVIELERILTRLLRILGESPKLEEIVKEQRQRALEDIQSTDNILSLLDYQDEEVEKIRGKLAGKKKNEEKKE
SIO_010081: MEFER_RS08145
subclass of: SO_0000673
so part of: MEFER_RS08145
location: complement(20620..21072)
location: region:20620-21072:-1
so has part: feature:20620-21072:-1:exon

WP_012795065.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20620-21072:-1:exon

MEFER_RS08150
type: Gene
subclass of: SO_0000704
RO_0002162: 573064
locus tag: MEFER_RS08150
old locus tag: Mefer_1619
so part of: sequence
location: complement(21074..21415)
location: region:21074-21415:-1
so has part: feature:21074-21415:-1:exon
subclass of: SO_0000010

8366327
type: Gene
SIO_000068: ncbigene

position:21074:-1
position: 21074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21415:-1
position: 21415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21074-21415:-1:exon

MEFER_RS08150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573064
locus tag: MEFER_RS08150
old locus tag: Mefer_1619
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013798670.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF5102 domain-containing protein
translation: MMNENEDFEGFEDIPIVSEDEDNFPNFEDDGESIPTNTTKSEDKATSHKKPTEDELPILDFNTLYKKIMIRIVKRLEIIHNITYQDRIKLLAGEIGRDLELLDELIKLKLGGE
SIO_010081: MEFER_RS08150
subclass of: SO_0000673
so part of: MEFER_RS08150
location: complement(21074..21415)
location: region:21074-21415:-1
so has part: feature:21074-21415:-1:exon

WP_245527803.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21074-21415:-1:exon

MEFER_RS08155
type: Gene
subclass of: SO_0000704
RO_0002162: 573064
locus tag: MEFER_RS08155
old locus tag: Mefer_1620
so part of: sequence
location: complement(21399..22187)
location: region:21399-22187:-1
so has part: feature:21399-22187:-1:exon
subclass of: SO_0000010

8366328
type: Gene
SIO_000068: ncbigene

position:21399:-1
position: 21399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22187:-1
position: 22187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21399-22187:-1:exon

MEFER_RS08155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 573064
locus tag: MEFER_RS08155
old locus tag: Mefer_1620
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012980719.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGLFGKFKTNYNTTQNQSLLQERTEPENLSTETKSESNPHDKKRLSNPIKLLRKKQIEKEKESIALNALAPYKAHQKAIIWNSGRGEKIFGYPIAIIPQPNGMYVILYRKRYYDWLDELITTLKSIITGKKEQYRAVHVPESCIDISEELITIYAHSFFIVNSYTEIAIPLGENPKDRMAYLLSLQEAEMYRNALEKMGYEFPNVIDSALNLNPTMRAYIGKETMSDKKKKTSKTKEFAGFDMSFSFDRFLKSLGGYDDERE
SIO_010081: MEFER_RS08155
subclass of: SO_0000673
so part of: MEFER_RS08155
location: complement(21399..22187)
location: region:21399-22187:-1
so has part: feature:21399-22187:-1:exon

WP_012795067.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21399-22187:-1:exon