Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequence.
Bacteria; Fusobacteriota; Fusobacteriia; Fusobacteriales; Fusobacteriaceae; Ilyobacter.
Complete genome sequence of Ilyobacter polytropus type strain (CuHbu1)
The complete plasmid1 of Ilyobacter polytrpous DSM 2926
Submitted (18-OCT-2010) US DOE Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598-1698, USA
REFSEQ INFORMATION: The reference sequence is identical to\nCP002282.1.\nURL -- http://www.jgi.doe.gov\nJGI Project ID: 4085717\nSource DNA and organism available from Hans-Peter Klenk at the\nGerman Collection of Microorganisms and Cell Cultures (DSMZ)\n(hans-peter.klenk@dsmz.de)\nContacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)\n Tanja Woyke (microbe@cuba.jgi-psf.org)\nWhole genome sequencing and draft assembly at JGI-PGF\nFinishing done by JGI-LANL\nAnnotation by JGI-ORNL and JGI-PGF\nThe JGI and collaborators endorse the principles for the\ndistribution and use of large scale sequencing data adopted by the\nlarger genome sequencing community and urge users of this data to\nfollow them. It is our intention to publish the work of this\nproject in a timely fashion and we welcome collaborative\ninteraction on the project and analysis.\n(http://www.genome.gov/page.cfm?pageID=10506376).\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##MIGS-Data-START##\ninvestigation_type :: bacteria_archaea\nproject_name :: Ilyobacter polytropus CuHBu1, DSM 2926\ncollection_date :: Missing\nlat_lon :: Missing\ndepth :: Missing\nalt_elev :: Missing\ncountry :: Germany\nenvironment :: Marine\nnum_replicons :: 1\nref_biomaterial :: DSM 2926\nbiotic_relationship :: Free living\ntrophic_level :: Chemoorganotroph\nrel_to_oxygen :: Anaerobe\nisol_growth_condt :: Missing\nsequencing_meth :: WGS\nassembly :: Newbler v. 2.3 (pre-release)\nfinishing_strategy :: Finished\nGOLD Stamp ID :: Gi02536\nType Strain :: Yes\nFunding Program :: DOE-GEBA 2007\nGene Calling Method :: Prodigal, GenePRIMP\nIsolation Site :: Marine mud from Germany\nCell Shape :: Rod-shaped\nMotility :: Nonmotile\nSporulation :: Nonsporulating\nTemperature Range :: Mesophile\nTemperature Optimum :: 30C\nGram Staining :: Gram-\nDiseases :: None\n##MIGS-Data-END##\n\n##Genome-Assembly-Data-START##\nFinishing Goal :: Finished\nCurrent Finishing Status :: Finished\nAssembly Method :: Newbler v. 2.3\nGenome Coverage :: 30x\nSequencing Technology :: 454/Illumina\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 05/02/2023 02:11:53\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 3,063\nCDSs (total) :: 2,955\nGenes (coding) :: 2,932\nCDSs (with protein) :: 2,932\nGenes (RNA) :: 108\nrRNAs :: 10, 8, 8 (5S, 16S, 23S)\ncomplete rRNAs :: 10, 8, 8 (5S, 16S, 23S)\ntRNAs :: 79\nncRNAs :: 3\nPseudo Genes (total) :: 23\nCDSs (without protein) :: 23\nPseudo Genes (ambiguous residues) :: 0 of 23\nPseudo Genes (frameshifted) :: 7 of 23\nPseudo Genes (incomplete) :: 15 of 23\nPseudo Genes (internal stop) :: 4 of 23\nPseudo Genes (multiple problems) :: 2 of 23\nCRISPR Arrays :: 1\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_008696177.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_003356156.1
COORDINATES: protein motif:HMM:NF025574.2
COORDINATES: similar to AA sequence:RefSeq:WP_012343243.1
COORDINATES: similar to AA sequence:RefSeq:WP_020252189.1
GO:0004849 - uridine kinase activity [Evidence IEA]
helix-turn-helix transcriptional regulator
COORDINATES: protein motif:HMM:NF014069.2
GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018248655.1
GO:0016763 - pentosyltransferase activity [Evidence IEA]
GO:0043101 - purine-containing compound salvage [Evidence IEA]; GO:0046110 - xanthine metabolic process [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00167
purine riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_008798829.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003922 - GMP synthase (glutamine-hydrolyzing) activity [Evidence IEA]; GO:0016462 - pyrophosphatase activity [Evidence IEA]
GO:0006177 - GMP biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000838147.1
GO:0003729 - mRNA binding [Evidence IEA]
type II toxin-antitoxin system HicA family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_009618758.1
type II toxin-antitoxin system HicB family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_013388463.1
COORDINATES: protein motif:HMM:NF018755.2
COORDINATES: protein motif:HMM:NF021220.2
COORDINATES: protein motif:HMM:NF016736.2
COORDINATES: protein motif:HMM:NF018674.2
COORDINATES: protein motif:HMM:TIGR01644.1
GO:0044423 - virion component [Evidence IEA]
GO:0005198 - structural molecule activity [Evidence IEA]
GO:0019068 - virion assembly [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007960525.1
COORDINATES: protein motif:HMM:TIGR01760.1
GO:0016032 - viral process [Evidence IEA]
COORDINATES: protein motif:HMM:NF016846.2
COORDINATES: protein motif:HMM:NF018472.2
COORDINATES: protein motif:HMM:NF015802.2
COORDINATES: protein motif:HMM:NF012783.2
GO:0004176 - ATP-dependent peptidase activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01539.1
COORDINATES: similar to AA sequence:RefSeq:WP_005960212.1
phage terminase large subunit family protein
COORDINATES: protein motif:HMM:NF019945.2
COORDINATES: similar to AA sequence:RefSeq:WP_005948078.1
AbrB/MazE/SpoVT family DNA-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013388495.1
COORDINATES: similar to AA sequence:RefSeq:WP_013388502.1
COORDINATES: protein motif:HMM:NF012920.2
COORDINATES: similar to AA sequence:RefSeq:WP_013388508.1
COORDINATES: protein motif:HMM:NF015340.2
phage regulatory protein/antirepressor Ant
COORDINATES: similar to AA sequence:RefSeq:WP_014417861.1
GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013388514.1
COORDINATES: similar to AA sequence:RefSeq:WP_008697376.1
COORDINATES: similar to AA sequence:RefSeq:WP_011016603.1
GO:0009982 - pseudouridine synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013740.2
GO:0015562 - efflux transmembrane transporter activity [Evidence IEA]
GO:1905887 - autoinducer AI-2 transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007059523.1
COORDINATES: similar to AA sequence:RefSeq:WP_005886578.1
class I SAM-dependent RNA methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_018205159.1
COORDINATES: protein motif:HMM:NF014273.2
ParB N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_018450776.1
GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]
GO:0000413 - protein peptidyl-prolyl isomerization [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013969694.1
COORDINATES: similar to AA sequence:RefSeq:WP_008798961.1
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_013298503.1
COORDINATES: similar to AA sequence:RefSeq:WP_017295785.1
manganese efflux pump MntP family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006929329.1
GO:0006002 - fructose 6-phosphate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011993808.1
COORDINATES: similar to AA sequence:RefSeq:WP_004104574.1
2Fe-2S iron-sulfur cluster binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013313129.1
COORDINATES: similar to AA sequence:RefSeq:WP_011993805.1
GO:0016655 - oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor [Evidence IEA]
NADH:ubiquinone reductase (Na(+)-transporting) subunit D
COORDINATES: protein motif:HMM:NF016121.2
COORDINATES: similar to AA sequence:RefSeq:WP_013932435.1
RnfABCDGE type electron transport complex subunit D
COORDINATES: nucleotide motif:Rfam:14.4:RF00177
Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:14.4:RF02541
COORDINATES: nucleotide motif:Rfam:14.4:RF00001
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
COORDINATES: similar to AA sequence:RefSeq:WP_016361798.1
putative peptidoglycan glycosyltransferase FtsW
COORDINATES: protein motif:HMM:NF015159.2
MetQ/NlpA family ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_012391036.1
GO:0004066 - asparagine synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0006529 - asparagine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008803595.1
COORDINATES: similar to AA sequence:RefSeq:WP_008697265.1
GO:0004816 - asparagine-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO:0006421 - asparaginyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF012958.2
COORDINATES: protein motif:HMM:NF013117.2
GO:0008381 - mechanosensitive monoatomic ion channel activity [Evidence IEA]
mechanosensitive ion channel family protein
COORDINATES: similar to AA sequence:RefSeq:WP_018249466.1
COORDINATES: similar to AA sequence:RefSeq:WP_018249465.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013188.2
GO:0006812 - monoatomic cation transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012102186.1
GO:0004497 - monooxygenase activity [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00050
FMN riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_005902111.1
GO:0009349 - riboflavin synthase complex [Evidence IEA]
GO:0000906 - 6,7-dimethyl-8-ribityllumazine synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009007135.1
GO:0008703 - 5-amino-6-(5-phosphoribosylamino)uracil reductase activity [Evidence IEA]; GO:0008835 - diaminohydroxyphosphoribosylaminopyrimidine deaminase activity [Evidence IEA]
bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
COORDINATES: similar to AA sequence:RefSeq:WP_016340047.1
COORDINATES: similar to AA sequence:RefSeq:WP_008802259.1
GO:0008686 - 3,4-dihydroxy-2-butanone-4-phosphate synthase activity [Evidence IEA]; GO:0003935 - GTP cyclohydrolase II activity [Evidence IEA]
bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II
COORDINATES: similar to AA sequence:RefSeq:WP_008800786.1
GO:0016829 - lyase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012635947.1
GO:0016836 - hydro-lyase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005956971.1
malic enzyme-like NAD(P)-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_013388356.1
COORDINATES: similar to AA sequence:RefSeq:WP_017732703.1
COORDINATES: protein motif:HMM:NF015983.2
GO:0003824 - catalytic activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
GO:0030246 - carbohydrate binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005948121.1
COORDINATES: similar to AA sequence:RefSeq:WP_008695594.1
COORDINATES: protein motif:HMM:NF016927.2
COORDINATES: similar to AA sequence:RefSeq:WP_005948113.1
COORDINATES: similar to AA sequence:RefSeq:WP_008695366.1
COORDINATES: similar to AA sequence:RefSeq:WP_013387395.1
COORDINATES: similar to AA sequence:RefSeq:WP_013387396.1
COORDINATES: protein motif:HMM:TIGR01641.1
COORDINATES: similar to AA sequence:RefSeq:WP_009524873.1
PBSX family phage terminase large subunit
COORDINATES: similar to AA sequence:RefSeq:WP_009007372.1
COORDINATES: similar to AA sequence:RefSeq:WP_005960337.1
COORDINATES: similar to AA sequence:RefSeq:WP_004247737.1
COORDINATES: similar to AA sequence:RefSeq:WP_013388392.1
COORDINATES: protein motif:HMM:NF019884.2
COORDINATES: similar to AA sequence:RefSeq:WP_013388396.1
COORDINATES: protein motif:HMM:NF015736.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0003678 - DNA helicase activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]
DnaB-like helicase C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF018653.2
COORDINATES: similar to AA sequence:RefSeq:WP_007157470.1
GO:0016301 - kinase activity [Evidence IEA]
type II toxin-antitoxin system death-on-curing family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_020251220.1
COORDINATES: protein motif:HMM:NF012027.0
GO:0003677 - DNA binding [Evidence IEA]; GO:0016788 - hydrolase activity, acting on ester bonds [Evidence IEA]
type III restriction-modification system endonuclease
COORDINATES: protein motif:HMM:NF013704.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0008170 - N-methyltransferase activity [Evidence IEA]
GO:0006306 - DNA methylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013388408.1
COORDINATES: protein motif:HMM:TIGR03033.1
COORDINATES: similar to AA sequence:RefSeq:WP_005958111.1
GO:0006259 - DNA metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013388418.1
COORDINATES: protein motif:HMM:NF012798.2
COORDINATES: similar to AA sequence:RefSeq:WP_006356043.1
GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]
isocitrate/isopropylmalate family dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_013537777.1
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF020495.2
COORDINATES: similar to AA sequence:RefSeq:WP_013386754.1
GO:0003824 - catalytic activity [Evidence IEA]
oxaloacetate decarboxylase subunit alpha
COORDINATES: protein motif:HMM:TIGR00797.1
GO:0042910 - xenobiotic transmembrane transporter activity [Evidence IEA]
GO:0009410 - response to xenobiotic stimulus [Evidence IEA]; GO:0006855 - xenobiotic transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013388010.1
sulfite exporter TauE/SafE family protein
COORDINATES: similar to AA sequence:RefSeq:WP_019394135.1
four-carbon acid sugar kinase family protein
COORDINATES: protein motif:HMM:NF013353.2
GO:0036361 - racemase activity, acting on amino acids and derivatives [Evidence IEA]
GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
aspartate/glutamate racemase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013082518.1
isocitrate/isopropylmalate dehydrogenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013386747.1
COORDINATES: similar to AA sequence:RefSeq:WP_013388516.1
COORDINATES: similar to AA sequence:RefSeq:WP_004107758.1
COORDINATES: protein motif:HMM:NF015297.2
COORDINATES: similar to AA sequence:RefSeq:WP_013779314.1
COORDINATES: similar to AA sequence:RefSeq:WP_005330881.1
COORDINATES: similar to AA sequence:RefSeq:WP_013386730.1
2-hydroxycarboxylate transporter family protein
COORDINATES: similar to AA sequence:RefSeq:WP_002568681.1
class II aldolase/adducin family protein
COORDINATES: protein motif:HMM:NF015729.2
COORDINATES: similar to AA sequence:RefSeq:WP_004457814.1
COORDINATES: protein motif:HMM:NF015431.2
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009266597.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO:0006313 - transposition, DNA-mediated [Evidence IEA]
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_013388535.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]
electron transfer flavoprotein subunit alpha/FixB family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013114049.1
GO:0009055 - electron transfer activity [Evidence IEA]
electron transfer flavoprotein subunit beta/FixA family protein
COORDINATES: similar to AA sequence:RefSeq:WP_005946700.1
COORDINATES: similar to AA sequence:RefSeq:WP_013388537.1
COORDINATES: similar to AA sequence:RefSeq:WP_013388538.1
COORDINATES: similar to AA sequence:RefSeq:WP_013386735.1
GO:0016747 - acyltransferase activity, transferring groups other than amino-acyl groups [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008908919.1
GO:0008410 - CoA-transferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005958399.1
COORDINATES: protein motif:HMM:NF012655.2
TetR/AcrR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_020581968.1
COORDINATES: protein motif:HMM:NF013296.2
COORDINATES: similar to AA sequence:RefSeq:WP_015328097.1
GO:0047590 - 5-dehydro-2-deoxygluconokinase activity [Evidence IEA]
GO:0019310 - inositol catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003250921.1
GO:0005886 - plasma membrane [Evidence IEA]
GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO:0008643 - carbohydrate transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019006927.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
sugar ABC transporter ATP-binding protein
COORDINATES: protein motif:HMM:NF024799.2
sugar ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_011231381.1
GO:0016823 - hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing)
COORDINATES: similar to AA sequence:RefSeq:WP_002018203.1
GO:0050114 - myo-inosose-2 dehydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011098803.1
GO:0050112 - inositol 2-dehydrogenase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012669.2
DeoR/GlpR family DNA-binding transcription regulator
COORDINATES: similar to AA sequence:RefSeq:WP_010167048.1
GO:0016861 - intramolecular oxidoreductase activity, interconverting aldoses and ketoses [Evidence IEA]
COORDINATES: protein motif:HMM:NF013429.2
sugar phosphate isomerase/epimerase family protein
COORDINATES: protein motif:HMM:NF040019.1
COORDINATES: similar to AA sequence:RefSeq:WP_003517573.1
COORDINATES: similar to AA sequence:RefSeq:WP_013433178.1
GO:0008678 - 2-deoxy-D-gluconate 3-dehydrogenase activity [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
GO:0000272 - polysaccharide catabolic process [Evidence IEA]
2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD
COORDINATES: similar to AA sequence:RefSeq:WP_007106962.1
substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010137015.1
SDR family NAD(P)-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_017791213.1
COORDINATES: protein motif:HMM:NF019552.2
COORDINATES: protein motif:HMM:NF027656.2
COORDINATES: similar to AA sequence:RefSeq:WP_017821226.1
GO:0043565 - sequence-specific DNA binding [Evidence IEA]
helix-turn-helix domain-containing protein
COORDINATES: protein motif:HMM:NF019349.2
COORDINATES: similar to AA sequence:RefSeq:WP_013779144.1
GO:0042597 - periplasmic space [Evidence IEA]
tripartite tricarboxylate transporter substrate binding protein
COORDINATES: protein motif:HMM:NF018979.2
GO:0005215 - transporter activity [Evidence IEA]
tripartite tricarboxylate transporter TctB family protein
COORDINATES: similar to AA sequence:RefSeq:WP_017028319.1
tripartite tricarboxylate transporter permease
COORDINATES: similar to AA sequence:RefSeq:WP_003441636.1
COORDINATES: similar to AA sequence:RefSeq:WP_016954241.1
GO:0030554 - adenyl nucleotide binding [Evidence IEA]; GO:0018455 - alcohol dehydrogenase [NAD(P)+] activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010166429.1
COORDINATES: similar to AA sequence:RefSeq:WP_011722823.1
COORDINATES: protein motif:HMM:NF020897.2
COORDINATES: similar to AA sequence:RefSeq:WP_017687367.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016116712.1
COORDINATES: similar to AA sequence:RefSeq:WP_015903391.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013187785.1
COORDINATES: protein motif:HMM:NF012321.2
COORDINATES: similar to AA sequence:RefSeq:WP_012862919.1
COORDINATES: similar to AA sequence:RefSeq:WP_013362210.1
COORDINATES: protein motif:HMM:NF020479.2
COORDINATES: protein motif:HMM:NF013757.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012515.2
COORDINATES: similar to AA sequence:RefSeq:WP_008697665.1
bifunctional 2-keto-4-hydroxyglutarate aldolase/2-keto-3-deoxy-6-phosphogluconate aldolase
COORDINATES: similar to AA sequence:RefSeq:WP_010234424.1
COORDINATES: similar to AA sequence:RefSeq:WP_008700184.1
GO:0003684 - damaged DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013724724.1
GO:0004177 - aminopeptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008695817.1
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: protein motif:HMM:NF014567.2
COORDINATES: similar to AA sequence:RefSeq:WP_005951366.1
COORDINATES: similar to AA sequence:RefSeq:WP_016361711.1
COORDINATES: similar to AA sequence:RefSeq:WP_013388595.1
COORDINATES: similar to AA sequence:RefSeq:WP_008695266.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
sigma-70 family RNA polymerase sigma factor
COORDINATES: protein motif:HMM:NF033516.0
GO:0004803 - transposase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF019284.2
toxin-antitoxin system YwqK family antitoxin
COORDINATES: protein motif:HMM:TIGR00254.1
GO:0009975 - cyclase activity [Evidence IEA]
GO:0009966 - regulation of signal transduction [Evidence IEA]
COORDINATES: protein motif:HMM:NF013397.2
GO:0015499 - formate transmembrane transporter activity [Evidence IEA]
GO:0015724 - formate transport [Evidence IEA]
formate/nitrite transporter family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008801806.1
GO:0070006 - metalloaminopeptidase activity [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF01750
ZMP/ZTP riboswitches appear to regulate genes involved in one-carbon metabolism; Derived by automated computational analysis using gene prediction method: cmsearch.
5-aminoimidazole-4-carboxamide ribonucleotide (ZMP)/ 5-aminoimidazole-4-carboxamide-1-beta-D-ribofuranosyl 5'-triphosphate (ZMT)
COORDINATES: similar to AA sequence:RefSeq:WP_009002031.1
GO:0008861 - formate C-acetyltransferase activity [Evidence IEA]
GO:0006113 - fermentation [Evidence IEA]; GO:0015942 - formate metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024812.2
COORDINATES: protein motif:HMM:NF038093.1
COORDINATES: protein motif:HMM:NF014605.2
COORDINATES: similar to AA sequence:RefSeq:WP_009448265.1
GO:0046872 - metal ion binding [Evidence IEA]; GO:0030151 - molybdenum ion binding [Evidence IEA]
MogA/MoaB family molybdenum cofactor biosynthesis protein
COORDINATES: similar to AA sequence:RefSeq:WP_008696501.1
PstS family phosphate ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_005946955.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]
GO:0006817 - phosphate ion transport [Evidence IEA]
phosphate ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_005980828.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]
phosphate ABC transporter permease subunit PstC
COORDINATES: similar to AA sequence:RefSeq:WP_005980827.1
COORDINATES: similar to AA sequence:RefSeq:WP_005946949.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]
phosphate ABC transporter ATP-binding protein PstB
COORDINATES: protein motif:HMM:NF014010.2
COORDINATES: similar to AA sequence:RefSeq:WP_005957905.1
COORDINATES: similar to AA sequence:RefSeq:WP_013114367.1
GO:0004637 - phosphoribosylamine-glycine ligase activity [Evidence IEA]
GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]; GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008697038.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0003937 - IMP cyclohydrolase activity [Evidence IEA]; GO:0004643 - phosphoribosylaminoimidazolecarboxamide formyltransferase activity [Evidence IEA]
GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]; GO:0006164 - purine nucleotide biosynthetic process [Evidence IEA]
bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_008908733.1
GO:0004644 - phosphoribosylglycinamide formyltransferase activity [Evidence IEA]
GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
phosphoribosylglycinamide formyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_005896891.1
GO:0004641 - phosphoribosylformylglycinamidine cyclo-ligase activity [Evidence IEA]
phosphoribosylformylglycinamidine cyclo-ligase
COORDINATES: similar to AA sequence:RefSeq:WP_010077432.1
GO:0004044 - amidophosphoribosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005977777.1
GO:0004639 - phosphoribosylaminoimidazolesuccinocarboxamide synthase activity [Evidence IEA]
GO:0006164 - purine nucleotide biosynthetic process [Evidence IEA]
phosphoribosylaminoimidazolesuccinocarboxamide synthase
COORDINATES: similar to AA sequence:RefSeq:WP_011943113.1
GO:0009320 - phosphoribosylaminoimidazole carboxylase complex [Evidence IEA]
GO:0034028 - 5-(carboxyamino)imidazole ribonucleotide synthase activity [Evidence IEA]
5-(carboxyamino)imidazole ribonucleotide synthase
COORDINATES: similar to AA sequence:RefSeq:WP_008192081.1
GO:0004638 - phosphoribosylaminoimidazole carboxylase activity [Evidence IEA]
5-(carboxyamino)imidazole ribonucleotide mutase
COORDINATES: similar to AA sequence:RefSeq:WP_008697042.1
GO:0004642 - phosphoribosylformylglycinamidine synthase activity [Evidence IEA]
GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]
phosphoribosylformylglycinamidine synthase
COORDINATES: similar to AA sequence:RefSeq:WP_020064251.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004329 - formate-tetrahydrofolate ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005981870.1
GO:0005951 - carbamoyl-phosphate synthase complex [Evidence IEA]
GO:0004088 - carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0009220 - pyrimidine ribonucleotide biosynthetic process [Evidence IEA]
glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
COORDINATES: similar to AA sequence:RefSeq:WP_008695790.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
carbamoyl-phosphate synthase large subunit
COORDINATES: similar to AA sequence:RefSeq:WP_012062266.1
GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013388819.1
COORDINATES: similar to AA sequence:RefSeq:WP_006785948.1
peptide ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_016208116.1
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005978869.1
COORDINATES: similar to AA sequence:RefSeq:WP_008826488.1
COORDINATES: similar to AA sequence:RefSeq:WP_006504298.1
ATP-binding cassette domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_018449985.1
GO:0016002 - sulfite reductase activity [Evidence IEA]
GO:0006790 - sulfur compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008697541.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0016002 - sulfite reductase activity [Evidence IEA]
anaerobic sulfite reductase subunit AsrB
COORDINATES: similar to AA sequence:RefSeq:WP_003476275.1
anaerobic sulfite reductase subunit AsrA
COORDINATES: similar to AA sequence:RefSeq:WP_016208553.1
COORDINATES: similar to AA sequence:RefSeq:WP_010076389.1
GO:0030552 - cAMP binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
Crp/Fnr family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_001060303.1
COORDINATES: similar to AA sequence:RefSeq:WP_002700027.1
GO:0030554 - adenyl nucleotide binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015358240.1
sulfide/dihydroorotate dehydrogenase-like FAD/NAD-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_005343772.1
GO:0004355 - glutamate synthase (NADPH) activity [Evidence IEA]
GO:0006537 - glutamate biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012772.2
COORDINATES: similar to AA sequence:RefSeq:WP_013381643.1
GO:0005506 - iron ion binding [Evidence IEA]; GO:0043768 - S-ribosylhomocysteine lyase activity [Evidence IEA]
GO:0009372 - quorum sensing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006807764.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC
COORDINATES: similar to AA sequence:RefSeq:WP_005981132.1
ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_005886371.1
COORDINATES: similar to AA sequence:RefSeq:WP_008696308.1
COORDINATES: similar to AA sequence:RefSeq:WP_005886373.1
COORDINATES: similar to AA sequence:RefSeq:WP_005917386.1
GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF036812.2
GO:0005525 - GTP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO:0006855 - xenobiotic transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002599492.1
COORDINATES: similar to AA sequence:RefSeq:WP_010611151.1
GO:0004719 - protein-L-isoaspartate (D-aspartate) O-methyltransferase activity [Evidence IEA]
GO:0036211 - protein modification process [Evidence IEA]
protein-L-isoaspartate(D-aspartate) O-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_016078183.1
GO:0051287 - NAD binding [Evidence IEA]; GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]; GO:0003979 - UDP-glucose 6-dehydrogenase activity [Evidence IEA]
GO:0000271 - polysaccharide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012257.2
GO:0030551 - cyclic nucleotide binding [Evidence IEA]
cyclic nucleotide-binding domain-containing protein
COORDINATES: protein motif:HMM:TIGR02532.1
COORDINATES: protein motif:HMM:NF012789.2
COORDINATES: protein motif:HMM:NF024117.2
COORDINATES: similar to AA sequence:RefSeq:WP_008696558.1
COORDINATES: similar to AA sequence:RefSeq:WP_010283686.1
COORDINATES: similar to AA sequence:RefSeq:WP_005887088.1
GO:0004527 - exonuclease activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: protein motif:HMM:NF024867.2
COORDINATES: similar to AA sequence:RefSeq:WP_006307443.1
COORDINATES: similar to AA sequence:RefSeq:WP_005961282.1
GO:0018580 - nitronate monooxygenase activity [Evidence IEA]
enoyl-[acyl-carrier-protein] reductase FabK
COORDINATES: similar to AA sequence:RefSeq:WP_013406445.1
GO:0010181 - FMN binding [Evidence IEA]; GO:0016703 - oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008697932.1
COORDINATES: similar to AA sequence:RefSeq:WP_018247345.1
COORDINATES: similar to AA sequence:RefSeq:WP_010964980.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0015930 - glutamate synthase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
GO:0006537 - glutamate biosynthetic process [Evidence IEA]; GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014256274.1
GO:0004648 - O-phospho-L-serine:2-oxoglutarate aminotransferase activity [Evidence IEA]
GO:0006564 - L-serine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01662.1
GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014062784.1
COORDINATES: protein motif:HMM:NF013491.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]
GO:0016310 - phosphorylation [Evidence IEA]
PEP/pyruvate-binding domain-containing protein
COORDINATES: protein motif:HMM:NF013412.2
pyridoxamine 5'-phosphate oxidase family protein
COORDINATES: protein motif:HMM:NF018431.2
COORDINATES: protein motif:HMM:NF012742.2
LacI family DNA-binding transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_005702996.1
GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010280264.1
GO:0008982 - protein-N(PI)-phosphohistidine-sugar phosphotransferase activity [Evidence IEA]
sucrose-specific PTS transporter subunit IIBC
COORDINATES: similar to AA sequence:RefSeq:WP_019685851.1
GO:0004564 - beta-fructofuranosidase activity [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010234050.1
COORDINATES: similar to AA sequence:RefSeq:WP_010966890.1
GO:0008616 - queuosine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004849621.1
GO:0003934 - GTP cyclohydrolase I activity [Evidence IEA]
GO:0042559 - pteridine-containing compound biosynthetic process [Evidence IEA]; GO:0046654 - tetrahydrofolate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010966888.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO:0006400 - tRNA modification [Evidence IEA]
putative 7-carboxy-7-deazaguanine synthase QueE
COORDINATES: similar to AA sequence:RefSeq:WP_014968732.1
COORDINATES: similar to AA sequence:RefSeq:WP_011722450.1
GO:0008047 - enzyme activator activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003358556.1
COORDINATES: similar to AA sequence:RefSeq:WP_012662489.1
COORDINATES: similar to AA sequence:RefSeq:WP_013388705.1
COORDINATES: similar to AA sequence:RefSeq:WP_013388704.1
COORDINATES: protein motif:HMM:NF014470.2
twin-arginine translocase TatA/TatE family subunit
COORDINATES: protein motif:HMM:TIGR00945.1
GO:0015628 - protein secretion by the type II secretion system [Evidence IEA]
GO:0015031 - protein transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF016983.2
COORDINATES: similar to AA sequence:RefSeq:WP_011400409.1
COORDINATES: similar to AA sequence:RefSeq:WP_010966217.1
COORDINATES: similar to AA sequence:RefSeq:WP_007063970.1
COORDINATES: similar to AA sequence:RefSeq:WP_010323551.1
COORDINATES: similar to AA sequence:RefSeq:WP_018248664.1
COORDINATES: similar to AA sequence:RefSeq:WP_018248667.1
GO:0009279 - cell outer membrane [Evidence IEA]
GO:0044874 - lipoprotein localization to outer membrane [Evidence IEA]; GO:0042953 - lipoprotein transport [Evidence IEA]
outer membrane lipoprotein-sorting protein
COORDINATES: similar to AA sequence:RefSeq:WP_013387442.1
COORDINATES: protein motif:HMM:NF023251.2
COORDINATES: similar to AA sequence:RefSeq:WP_008697757.1
sulfurtransferase-like selenium metabolism protein YedF
COORDINATES: similar to AA sequence:RefSeq:WP_007285439.1
GO:0004756 - selenide, water dikinase activity [Evidence IEA]
GO:0001887 - selenium compound metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF019604.2
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007863959.1
GO:0005575 - cellular_component [Evidence IEA]
GO:0043751 - polyphosphate:AMP phosphotransferase activity [Evidence IEA]
GO:0006797 - polyphosphate metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014587.2
GO:0000166 - nucleotide binding [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF01051
cyclic di-GMP riboswitch class I; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:TIGR00229.1
COORDINATES: protein motif:HMM:NF012301.2
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011300190.1
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_013388813.1
COORDINATES: similar to AA sequence:RefSeq:WP_005961465.1
GO:0008879 - glucose-1-phosphate thymidylyltransferase activity [Evidence IEA]
GO:0019305 - dTDP-rhamnose biosynthetic process [Evidence IEA]; GO:0009243 - O antigen biosynthetic process [Evidence IEA]
glucose-1-phosphate thymidylyltransferase RfbA
COORDINATES: similar to AA sequence:RefSeq:WP_008697818.1
GO:0008830 - dTDP-4-dehydrorhamnose 3,5-epimerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018499758.1
GO:0008831 - dTDP-4-dehydrorhamnose reductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006806215.1
COORDINATES: protein motif:HMM:NF024863.2
GDSL-type esterase/lipase family protein
COORDINATES: protein motif:HMM:NF015146.2
COORDINATES: similar to AA sequence:RefSeq:WP_005976953.1
GO:0008745 - N-acetylmuramoyl-L-alanine amidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0071555 - cell wall organization [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003410461.1
GO:0004514 - nicotinate-nucleotide diphosphorylase (carboxylating) activity [Evidence IEA]
GO:0019363 - pyridine nucleotide biosynthetic process [Evidence IEA]
carboxylating nicotinate-nucleotide diphosphorylase
COORDINATES: protein motif:HMM:NF004820.0
GO:0008734 - L-aspartate oxidase activity [Evidence IEA]
GO:0009435 - NAD biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003440625.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0008987 - quinolinate synthetase A activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012859320.1
COORDINATES: protein motif:HMM:TIGR00383.1
GO:0015087 - cobalt ion transmembrane transporter activity [Evidence IEA]; GO:0015095 - magnesium ion transmembrane transporter activity [Evidence IEA]
GO:0006824 - cobalt ion transport [Evidence IEA]; GO:0015693 - magnesium ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018843249.1
COORDINATES: protein motif:HMM:TIGR00249.1
GO:0101006 - protein histidine phosphatase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF016763.2
COORDINATES: protein motif:HMM:TIGR00099.1
COORDINATES: protein motif:HMM:NF002486.0
COORDINATES: similar to AA sequence:RefSeq:WP_015594050.1
COORDINATES: protein motif:HMM:TIGR00741.1
GO:0022626 - cytosolic ribosome [Evidence IEA]; GO:0005840 - ribosome [Evidence IEA]
GO:0045182 - translation regulator activity [Evidence IEA]
GO:0009386 - translational attenuation [Evidence IEA]
ribosome-associated translation inhibitor RaiA
COORDINATES: protein motif:HMM:NF012707.2
COORDINATES: similar to AA sequence:RefSeq:WP_008797891.1
GO:0008170 - N-methyltransferase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]; GO:0016430 - tRNA (adenine-N6-)-methyltransferase activity [Evidence IEA]
tRNA1(Val) (adenine(37)-N6)-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_011362571.1
GO:0015116 - sulfate transmembrane transporter activity [Evidence IEA]
GO:0008272 - sulfate transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005981587.1
PocR ligand-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_005909929.1
COORDINATES: similar to AA sequence:RefSeq:WP_008702396.1
COORDINATES: similar to AA sequence:RefSeq:WP_007059945.1
COORDINATES: similar to AA sequence:RefSeq:WP_003525541.1
COORDINATES: protein motif:HMM:NF013772.2
COORDINATES: similar to AA sequence:RefSeq:WP_005947620.1
GO:0046872 - metal ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005947621.1
GO:0031469 - bacterial microcompartment [Evidence IEA]
propanediol utilization microcompartment protein PduB
COORDINATES: similar to AA sequence:RefSeq:WP_008702390.1
propanediol/glycerol family dehydratase large subunit
COORDINATES: similar to AA sequence:RefSeq:WP_008694309.1
propanediol/glycerol family dehydratase medium subunit
COORDINATES: similar to AA sequence:RefSeq:WP_005894448.1
COORDINATES: similar to AA sequence:RefSeq:WP_008695971.1
diol dehydratase reactivase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_008695970.1
glycerol dehydratase reactivase beta/small subunit family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007494471.1
COORDINATES: similar to AA sequence:RefSeq:WP_005894452.1
COORDINATES: similar to AA sequence:RefSeq:WP_009063981.1
COORDINATES: similar to AA sequence:RefSeq:WP_005981613.1
COORDINATES: similar to AA sequence:RefSeq:WP_005905993.1
EutN/CcmL family microcompartment protein
COORDINATES: similar to AA sequence:RefSeq:WP_008695957.1
GO:0008817 - corrinoid adenosyltransferase activity [Evidence IEA]
GO:0009236 - cobalamin biosynthetic process [Evidence IEA]
cob(I)yrinic acid a,c-diamide adenosyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_005947646.1
COORDINATES: similar to AA sequence:RefSeq:WP_005947648.1
COORDINATES: similar to AA sequence:RefSeq:WP_005911396.1
GO:0005515 - protein binding [Evidence IEA]
GO:0051301 - cell division [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007469353.1
GO:0015267 - channel activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014689.2
COORDINATES: nucleotide motif:Rfam:14.4:RF00174
cobalamin riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_008697244.1
GO:0042242 - cobyrinic acid a,c-diamide synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005957322.1
COORDINATES: protein motif:HMM:TIGR00312.2
cobalt-precorrin-5B (C(1))-methyltransferase CbiD
COORDINATES: similar to AA sequence:RefSeq:WP_012806602.1
GO:0046025 - precorrin-6Y C5,15-methyltransferase (decarboxylating) activity [Evidence IEA]
GO:0046140 - corrin biosynthetic process [Evidence IEA]
precorrin-6y C5,15-methyltransferase (decarboxylating) subunit CbiE
COORDINATES: similar to AA sequence:RefSeq:WP_005977106.1
precorrin-6Y C5,15-methyltransferase (decarboxylating) subunit CbiT
COORDINATES: similar to AA sequence:RefSeq:WP_005977108.1
GO:0030788 - precorrin-2 C20-methyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008797282.1
GO:0046026 - precorrin-4 C11-methyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005885276.1
COORDINATES: similar to AA sequence:RefSeq:WP_012860479.1
GO:0030789 - precorrin-3B C17-methyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005977116.1
GO:0016994 - precorrin-6A reductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012806171.1
COORDINATES: similar to AA sequence:RefSeq:WP_005912799.1
GO:0016880 - acid-ammonia (or amide) ligase activity [Evidence IEA]
adenosylcobinamide-phosphate synthase CbiB
COORDINATES: similar to AA sequence:RefSeq:WP_006807211.1
GO:0048472 - threonine-phosphate decarboxylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005974215.1
GO:0008883 - glutamyl-tRNA reductase activity [Evidence IEA]
GO:0006779 - porphyrin-containing compound biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005918433.1
GO:0004418 - hydroxymethylbilane synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005912188.1
GO:0004851 - uroporphyrin-III C-methyltransferase activity [Evidence IEA]
GO:0019354 - siroheme biosynthetic process [Evidence IEA]
uroporphyrinogen-III C-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_005951923.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004655 - porphobilinogen synthase activity [Evidence IEA]
GO:0033014 - tetrapyrrole biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006807238.1
GO:0042286 - glutamate-1-semialdehyde 2,1-aminomutase activity [Evidence IEA]
glutamate-1-semialdehyde 2,1-aminomutase
COORDINATES: similar to AA sequence:RefSeq:WP_003451262.1
GO:0004359 - glutaminase activity [Evidence IEA]
GO:0006541 - glutamine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002579893.1
COORDINATES: similar to AA sequence:RefSeq:WP_005550678.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004357 - glutamate-cysteine ligase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO:0006750 - glutathione biosynthetic process [Evidence IEA]
bifunctional glutamate--cysteine ligase GshA/glutathione synthetase GshB
COORDINATES: similar to AA sequence:RefSeq:WP_012424401.1
COORDINATES: similar to AA sequence:RefSeq:WP_011016462.1
bifunctional precorrin-2 dehydrogenase/sirohydrochlorin ferrochelatase
sensor domain-containing diguanylate cyclase
COORDINATES: protein motif:HMM:NF013069.2
COORDINATES: protein motif:HMM:TIGR01730.1
efflux RND transporter periplasmic adaptor subunit
COORDINATES: similar to AA sequence:RefSeq:WP_008827321.1
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]
GO:0030001 - metal ion transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010243927.1
metal ABC transporter ATP-binding protein
COORDINATES: protein motif:HMM:NF013465.2
zinc ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_020877360.1
COORDINATES: similar to AA sequence:RefSeq:WP_013388734.1
COORDINATES: similar to AA sequence:RefSeq:WP_014063423.1
GO:0008150 - biological_process [Evidence IEA]
secondary thiamine-phosphate synthase enzyme YjbQ
COORDINATES: protein motif:HMM:NF025854.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]; GO:0004673 - protein histidine kinase activity [Evidence IEA]
GO:0007165 - signal transduction [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002673492.1
GGDEF domain-containing phosphodiesterase
COORDINATES: similar to AA sequence:RefSeq:WP_011010029.1
COORDINATES: similar to AA sequence:RefSeq:WP_003477110.1
GO:0102039 - NADH-dependent peroxiredoxin activity [Evidence IEA]
GO:0006979 - response to oxidative stress [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005981341.1
COORDINATES: similar to AA sequence:RefSeq:WP_003452924.1
GO:0003849 - 3-deoxy-7-phosphoheptulonate synthase activity [Evidence IEA]
GO:0009423 - chorismate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002598375.1
COORDINATES: similar to AA sequence:RefSeq:WP_015770190.1
GO:0003866 - 3-phosphoshikimate 1-carboxyvinyltransferase activity [Evidence IEA]
3-phosphoshikimate 1-carboxyvinyltransferase
COORDINATES: protein motif:HMM:NF012998.2
bifunctional chorismate mutase/prephenate dehydratase
COORDINATES: protein motif:HMM:NF012382.2
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_009134399.1
GO:0004107 - chorismate synthase activity [Evidence IEA]
GO:0009073 - aromatic amino acid family biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013375.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0004765 - shikimate kinase activity [Evidence IEA]
GO:0008652 - amino acid biosynthetic process [Evidence IEA]; GO:0009073 - aromatic amino acid family biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012640.2
anthranilate synthase component I family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012739537.1
GO:0046820 - 4-amino-4-deoxychorismate synthase activity [Evidence IEA]; GO:0004049 - anthranilate synthase activity [Evidence IEA]
GO:0000162 - tryptophan biosynthetic process [Evidence IEA]
aminodeoxychorismate/anthranilate synthase component II
COORDINATES: protein motif:HMM:TIGR01245.1
GO:0004048 - anthranilate phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003520913.1
GO:0004425 - indole-3-glycerol-phosphate synthase activity [Evidence IEA]
GO:0006568 - tryptophan metabolic process [Evidence IEA]
indole-3-glycerol phosphate synthase TrpC
COORDINATES: similar to AA sequence:RefSeq:WP_012101665.1
COORDINATES: similar to AA sequence:RefSeq:WP_017814404.1
GO:0004834 - tryptophan synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015616562.1
COORDINATES: similar to AA sequence:RefSeq:WP_014642057.1
COORDINATES: protein motif:HMM:NF017044.2
COORDINATES: protein motif:HMM:NF025115.2
DUF3298 and DUF4163 domain-containing protein
COORDINATES: nucleotide motif:Rfam:14.4:RF00162
SAM riboswitch class I; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_014967926.1
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase
COORDINATES: similar to AA sequence:RefSeq:WP_005981760.1
GO:0004489 - methylenetetrahydrofolate reductase (NAD(P)H) activity [Evidence IEA]
GO:0009086 - methionine biosynthetic process [Evidence IEA]
methylenetetrahydrofolate reductase [NAD(P)H]
COORDINATES: similar to AA sequence:RefSeq:WP_013388843.1
COORDINATES: protein motif:HMM:NF005154.0
GO:0004072 - aspartate kinase activity [Evidence IEA]
GO:0009089 - lysine biosynthetic process via diaminopimelate [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005981758.1
GO:0008705 - methionine synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00738.1
COORDINATES: similar to AA sequence:RefSeq:WP_013726543.1
COORDINATES: similar to AA sequence:RefSeq:WP_005949346.1
GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]; GO:0001072 - transcription antitermination factor activity, RNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF014904.2
[Fe-Fe] hydrogenase large subunit C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_020485427.1
COORDINATES: similar to AA sequence:RefSeq:WP_007431844.1
COORDINATES: protein motif:HMM:NF014305.2
COORDINATES: protein motif:HMM:NF013691.2
GO:0004518 - nuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF019436.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0000156 - phosphorelay response regulator activity [Evidence IEA]; GO:0004673 - protein histidine kinase activity [Evidence IEA]
HAMP domain-containing sensor histidine kinase
COORDINATES: similar to AA sequence:RefSeq:WP_008795799.1
COORDINATES: similar to AA sequence:RefSeq:WP_005909479.1
GO:0016757 - glycosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013167804.1
lipid-A-disaccharide synthase N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF024629.2
COORDINATES: similar to AA sequence:RefSeq:WP_005947907.1
COORDINATES: similar to AA sequence:RefSeq:WP_019190289.1
COORDINATES: protein motif:HMM:NF013214.2
COORDINATES: protein motif:HMM:NF013226.2
COORDINATES: protein motif:HMM:NF039186.1
lycopene cyclase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013388103.1
GO:0071705 - nitrogen compound transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF014033.2
COORDINATES: similar to AA sequence:RefSeq:WP_013388989.1
GO:0008199 - ferric iron binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020875445.1
COORDINATES: similar to AA sequence:RefSeq:WP_011305878.1
COORDINATES: similar to AA sequence:RefSeq:WP_007292452.1
GO:0004784 - superoxide dismutase activity [Evidence IEA]
GO:0019430 - removal of superoxide radicals [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004813856.1
COORDINATES: similar to AA sequence:RefSeq:WP_013389228.1
COORDINATES: similar to AA sequence:RefSeq:WP_005365487.1
COORDINATES: protein motif:HMM:NF028235.2
COORDINATES: similar to AA sequence:RefSeq:WP_013361323.1
COORDINATES: similar to AA sequence:RefSeq:WP_003416870.1
COORDINATES: protein motif:HMM:NF020123.2
COORDINATES: similar to AA sequence:RefSeq:WP_004570839.1
GO:0018784 - (S)-2-haloacid dehalogenase activity [Evidence IEA]
GO:0006805 - xenobiotic metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014356621.1
COORDINATES: similar to AA sequence:RefSeq:WP_017209357.1
COORDINATES: similar to AA sequence:RefSeq:WP_015903980.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0010181 - FMN binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014270798.1
COORDINATES: protein motif:HMM:TIGR02181.1
GO:0015036 - disulfide oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010510654.1
GO:0004791 - thioredoxin-disulfide reductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005887269.1
cysteine-rich small domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_005661048.1
GO:0016812 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008798014.1
COORDINATES: protein motif:HMM:NF014375.2
GO:0031419 - cobalamin binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
Presence of a B(12) (cobalamin)-binding domain implies dependence on cobalamin itself, in one of its several forms, or in some unusual lineages, dependence on a cobalamin-like analog.; Presence of a B(12) (cobalamin)-binding domain implies dependence on cobalamin itself, in one of its several forms, or in some unusual lineages, dependence on a cobalamin-like analog; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_005915291.1
COORDINATES: protein motif:HMM:NF008864.0
GO:1990610 - acetolactate synthase regulator activity [Evidence IEA]
GO:0009082 - branched-chain amino acid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005973590.1
GO:0005948 - acetolactate synthase complex [Evidence IEA]
GO:0003984 - acetolactate synthase activity [Evidence IEA]
GO:0009097 - isoleucine biosynthetic process [Evidence IEA]; GO:0009099 - valine biosynthetic process [Evidence IEA]
biosynthetic-type acetolactate synthase large subunit
COORDINATES: similar to AA sequence:RefSeq:WP_005947969.1
GO:0004588 - orotate phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005957187.1
COORDINATES: similar to AA sequence:RefSeq:WP_005976532.1
GO:0004590 - orotidine-5'-phosphate decarboxylase activity [Evidence IEA]
GO:0006207 - 'de novo' pyrimidine nucleobase biosynthetic process [Evidence IEA]; GO:0044205 - 'de novo' UMP biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012862104.1
GO:0004152 - dihydroorotate dehydrogenase activity [Evidence IEA]
GO:0006221 - pyrimidine nucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005964672.1
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
dihydroorotate dehydrogenase electron transfer subunit
COORDINATES: similar to AA sequence:RefSeq:WP_012862106.1
GO:0004070 - aspartate carbamoyltransferase activity [Evidence IEA]
aspartate carbamoyltransferase regulatory subunit
COORDINATES: similar to AA sequence:RefSeq:WP_018498606.1
COORDINATES: protein motif:HMM:NF008746.0
GO:0000175 - 3'-5'-exoribonuclease activity [Evidence IEA]; GO:0008852 - exodeoxyribonuclease I activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00067.1
GO:0008881 - glutamate racemase activity [Evidence IEA]
GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005979105.1
GO:0015501 - glutamate:sodium symporter activity [Evidence IEA]
GO:0015813 - L-glutamate transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008938665.1
COORDINATES: similar to AA sequence:RefSeq:WP_005949669.1
LytTR family DNA-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_005957990.1
GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]; GO:0004673 - protein histidine kinase activity [Evidence IEA]
GO:0071555 - cell wall organization [Evidence IEA]; GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
LytS/YhcK type 5TM receptor domain-containing protein
COORDINATES: protein motif:HMM:NF024230.2
threonine/serine exporter family protein
COORDINATES: protein motif:HMM:NF018448.2
COORDINATES: similar to AA sequence:RefSeq:WP_005884399.1
COORDINATES: similar to AA sequence:RefSeq:WP_005949716.1
COORDINATES: similar to AA sequence:RefSeq:WP_011723104.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0009374 - biotin binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004736 - pyruvate carboxylase activity [Evidence IEA]
GO:0006094 - gluconeogenesis [Evidence IEA]; GO:0006090 - pyruvate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011358302.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0050066 - lysine 2,3-aminomutase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO:0046440 - L-lysine metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03827.1
GO:0008080 - N-acetyltransferase activity [Evidence IEA]
putative beta-lysine N-acetyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_005950523.1
COORDINATES: similar to AA sequence:RefSeq:WP_005884397.1
murein L,D-transpeptidase catalytic domain family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008517208.1
COORDINATES: similar to AA sequence:RefSeq:WP_011916588.1
COORDINATES: similar to AA sequence:RefSeq:WP_007711004.1
COORDINATES: similar to AA sequence:RefSeq:WP_012449492.1
COORDINATES: similar to AA sequence:RefSeq:WP_013656474.1
GO:0015833 - peptide transport [Evidence IEA]
dipeptide ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_010168106.1
COORDINATES: similar to AA sequence:RefSeq:WP_007088155.1
COORDINATES: protein motif:HMM:NF002881.0
GO:0004801 - transaldolase activity [Evidence IEA]
GO:0006098 - pentose-phosphate shunt [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015904696.1
GO:0005283 - amino acid:sodium symporter activity [Evidence IEA]; GO:0015293 - symporter activity [Evidence IEA]
GO:0006865 - amino acid transport [Evidence IEA]; GO:0006814 - sodium ion transport [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00504
glycine riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_003487780.1
GO:0001727 - lipid kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005980224.1
COORDINATES: protein motif:HMM:TIGR00663.1
GO:0009360 - DNA polymerase III complex [Evidence IEA]
GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005948236.1
COORDINATES: nucleotide motif:Rfam:14.4:RF01734
Fluoride riboswitches increase expression of downstream genes that help mitigate the toxic effects of very high levels of fluoride; They are found in a wide variety of bacteria and archaea; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_005883324.1
COORDINATES: similar to AA sequence:RefSeq:WP_008698834.1
COORDINATES: similar to AA sequence:RefSeq:WP_017842971.1
COORDINATES: similar to AA sequence:RefSeq:WP_012861789.1
GO:0004356 - glutamate-ammonia ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024685.2
COORDINATES: similar to AA sequence:RefSeq:WP_015838481.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005885521.1
GO:0008808 - cardiolipin synthase activity [Evidence IEA]
GO:0032049 - cardiolipin biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005948489.1
COORDINATES: protein motif:HMM:NF025957.2
COORDINATES: protein motif:HMM:NF024803.2
COORDINATES: similar to AA sequence:RefSeq:WP_008697832.1
COORDINATES: protein motif:HMM:NF014385.2
COORDINATES: protein motif:HMM:NF015737.2
autotransporter outer membrane beta-barrel domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_003489914.1
GO:0004735 - pyrroline-5-carboxylate reductase activity [Evidence IEA]
GO:0006561 - proline biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024724.2
COORDINATES: protein motif:HMM:NF014471.2
GO:0015109 - chromate transmembrane transporter activity [Evidence IEA]
GO:0015703 - chromate transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004443982.1
COORDINATES: similar to AA sequence:RefSeq:WP_001033080.1
GO:0046872 - metal ion binding [Evidence IEA]; GO:0042578 - phosphoric ester hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011016856.1
S1-like domain-containing RNA-binding protein
COORDINATES: protein motif:HMM:NF016160.2
SoxR reducing system RseC family protein
COORDINATES: protein motif:HMM:NF012621.2
COORDINATES: similar to AA sequence:RefSeq:WP_005981777.1
GO:0046872 - metal ion binding [Evidence IEA]; GO:0016791 - phosphatase activity [Evidence IEA]
GO:0016311 - dephosphorylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005899735.1
COORDINATES: protein motif:HMM:NF033912.1
COORDINATES: similar to AA sequence:RefSeq:WP_020536894.1
COORDINATES: similar to AA sequence:RefSeq:WP_015926347.1
COORDINATES: protein motif:HMM:NF020248.2
COORDINATES: similar to AA sequence:RefSeq:WP_012610347.1
COORDINATES: similar to AA sequence:RefSeq:WP_013682385.1
TAXI family TRAP transporter solute-binding subunit
COORDINATES: similar to AA sequence:RefSeq:WP_018707605.1
aspartate aminotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_005886003.1
COORDINATES: similar to AA sequence:RefSeq:WP_005977806.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
2Fe-2S iron-sulfur cluster-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_005977809.1
COORDINATES: similar to AA sequence:RefSeq:WP_018595176.1
4Fe-4S dicluster domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_005977815.1
COORDINATES: similar to AA sequence:RefSeq:WP_015558159.1
COORDINATES: similar to AA sequence:RefSeq:WP_018595173.1
CoB--CoM heterodisulfide reductase iron-sulfur subunit A family protein
COORDINATES: similar to AA sequence:RefSeq:WP_005977830.1
COORDINATES: similar to AA sequence:RefSeq:WP_005948545.1
CoB--CoM heterodisulfide reductase iron-sulfur subunit B family protein
COORDINATES: similar to AA sequence:RefSeq:WP_005977368.1
COORDINATES: protein motif:HMM:NF017026.2
methyltransferase domain-containing protein
COORDINATES: protein motif:HMM:NF012790.2
GO:0016783 - sulfurtransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013388874.1
COORDINATES: similar to AA sequence:RefSeq:WP_005956223.1
COORDINATES: similar to AA sequence:RefSeq:WP_005947058.1
COORDINATES: similar to AA sequence:RefSeq:WP_014271460.1
COORDINATES: protein motif:HMM:NF012686.2
COORDINATES: similar to AA sequence:RefSeq:WP_013624589.1
GO:0010181 - FMN binding [Evidence IEA]; GO:0016646 - oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor [Evidence IEA]
COORDINATES: protein motif:HMM:NF019575.2
prepilin-type N-terminal cleavage/methylation domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015406908.1
COORDINATES: similar to AA sequence:RefSeq:WP_002597593.1
GO:0004125 - L-seryl-tRNASec selenium transferase activity [Evidence IEA]
GO:0016260 - selenocysteine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00475.1
GO:0003746 - translation elongation factor activity [Evidence IEA]
GO:0001514 - selenocysteine incorporation [Evidence IEA]; GO:0006414 - translational elongation [Evidence IEA]
selenocysteine-specific translation elongation factor
COORDINATES: similar to AA sequence:RefSeq:WP_010293963.1
GO:0004585 - ornithine carbamoyltransferase activity [Evidence IEA]
GO:0042450 - arginine biosynthetic process via ornithine [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003443549.1
COORDINATES: similar to AA sequence:RefSeq:WP_018499809.1
GO:0003991 - acetylglutamate kinase activity [Evidence IEA]
GO:0006592 - ornithine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010077481.1
carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit
COORDINATES: similar to AA sequence:RefSeq:WP_014968462.1
COORDINATES: similar to AA sequence:RefSeq:WP_015768890.1
GO:0004358 - glutamate N-acetyltransferase activity [Evidence IEA]
GO:0006526 - arginine biosynthetic process [Evidence IEA]
bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ
COORDINATES: similar to AA sequence:RefSeq:WP_010965686.1
GO:0003942 - N-acetyl-gamma-glutamyl-phosphate reductase activity [Evidence IEA]
N-acetyl-gamma-glutamyl-phosphate reductase
COORDINATES: protein motif:HMM:NF014774.2
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02727.1
GO:0030272 - 5-formyltetrahydrofolate cyclo-ligase activity [Evidence IEA]
GO:0006730 - one-carbon metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013389016.1
PucR family transcriptional regulator ligand-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012103357.1
COORDINATES: similar to AA sequence:RefSeq:WP_017212543.1
GO:0003867 - 4-aminobutyrate transaminase activity [Evidence IEA]
GO:0009450 - gamma-aminobutyric acid catabolic process [Evidence IEA]
4-aminobutyrate--2-oxoglutarate transaminase
COORDINATES: similar to AA sequence:RefSeq:WP_018592220.1
COORDINATES: similar to AA sequence:RefSeq:WP_013389011.1
COORDINATES: similar to AA sequence:RefSeq:WP_013386581.1
COORDINATES: similar to AA sequence:RefSeq:WP_007954457.1
GO:0009027 - tartrate dehydrogenase activity [Evidence IEA]
GO:0046395 - carboxylic acid catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014968780.1
COORDINATES: similar to AA sequence:RefSeq:WP_010234291.1
COORDINATES: similar to AA sequence:RefSeq:WP_005952784.1
GO:0006414 - translational elongation [Evidence IEA]
COORDINATES: protein motif:HMM:NF021598.2
elongation factor P maturation arginine rhamnosyltransferase EarP
COORDINATES: similar to AA sequence:RefSeq:WP_010632727.1
GO:0004521 - endoribonuclease activity [Evidence IEA]
GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03639.1
GO:0004520 - endodeoxyribonuclease activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
GO:0051607 - defense response to virus [Evidence IEA]; GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
type II CRISPR-associated endonuclease Cas1
COORDINATES: protein motif:HMM:TIGR01865.1
GO:0004520 - endodeoxyribonuclease activity [Evidence IEA]
Cas9, originally named Csn1, is the large, multifunctional signature protein of type II CRISPR/Cas systems. It is well known even to general audiences because its RNA-guided endonuclease activity has made it a popular tool for custom editing of eukaryotic genomes; Derived by automated computational analysis using gene prediction method: Protein Homology.
type II CRISPR RNA-guided endonuclease Cas9
COORDINATES: protein motif:HMM:NF013231.2
COORDINATES: protein motif:HMM:NF006875.0
GO:0008428 - ribonuclease inhibitor activity [Evidence IEA]
GO:0051252 - regulation of RNA metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003411925.1
COORDINATES: protein motif:HMM:NF024811.2
COORDINATES: similar to AA sequence:RefSeq:WP_017414087.1
COORDINATES: protein motif:HMM:NF013648.2
COORDINATES: protein motif:HMM:NF012235.2
COORDINATES: protein motif:HMM:NF013219.2
GO:0006826 - iron ion transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF017944.2
GO:0016852 - sirohydrochlorin cobaltochelatase activity [Evidence IEA]
GO:0019251 - anaerobic cobalamin biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011966308.1
COORDINATES: similar to AA sequence:RefSeq:WP_005588198.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014724.2
COORDINATES: similar to AA sequence:RefSeq:WP_006309555.1
GO:0071111 - cyclic-guanylate-specific phosphodiesterase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005976950.1
GO:0030261 - chromosome condensation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010652163.1
COORDINATES: similar to AA sequence:RefSeq:WP_010023834.1
COORDINATES: similar to AA sequence:RefSeq:WP_012193460.1
COORDINATES: similar to AA sequence:RefSeq:WP_013485580.1
metalloregulator ArsR/SmtB family transcription factor
COORDINATES: protein motif:HMM:NF012241.2
COORDINATES: similar to AA sequence:RefSeq:WP_012064048.1
COORDINATES: similar to AA sequence:RefSeq:WP_015863622.1
COORDINATES: similar to AA sequence:RefSeq:WP_009004022.1
COORDINATES: similar to AA sequence:RefSeq:WP_015310789.1
GO:0045454 - cell redox homeostasis [Evidence IEA]
COORDINATES: protein motif:HMM:NF025224.2
leucine-rich repeat domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_005884053.1
GO:0015205 - nucleobase transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024491.2
phospholipase D-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_003440973.1
N-terminal region resembles flavodoxins. C-terminal ferrodoxin region binds two 4Fe-4S clusters; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_006969791.1
internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF013964.2
GO:0004519 - endonuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006930525.1
COORDINATES: similar to AA sequence:RefSeq:WP_008045900.1
rhodanese-like domain-containing protein
COORDINATES: protein motif:HMM:NF019199.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012738.2
COORDINATES: similar to AA sequence:RefSeq:WP_006312072.1
COORDINATES: similar to AA sequence:RefSeq:WP_003487170.1
COORDINATES: similar to AA sequence:RefSeq:WP_017727112.1
GO:0047200 - tetrahydrodipicolinate N-acetyltransferase activity [Evidence IEA]
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase
COORDINATES: protein motif:HMM:TIGR00036.1
GO:0008839 - 4-hydroxy-tetrahydrodipicolinate reductase [Evidence IEA]
4-hydroxy-tetrahydrodipicolinate reductase
COORDINATES: similar to AA sequence:RefSeq:WP_006355225.1
GO:0008840 - 4-hydroxy-tetrahydrodipicolinate synthase activity [Evidence IEA]
4-hydroxy-tetrahydrodipicolinate synthase
COORDINATES: similar to AA sequence:RefSeq:WP_006807347.1
GO:0004073 - aspartate-semialdehyde dehydrogenase activity [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]; GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IEA]
GO:0008652 - amino acid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015769586.1
GO:0008837 - diaminopimelate epimerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008696624.1
COORDINATES: similar to AA sequence:RefSeq:WP_012862416.1
GO:0008836 - diaminopimelate decarboxylase activity [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00168
Lysine riboswitch is most abundant in Firmicutes and Gammaproteobacteria where they are found upstream of a number of genes involved in lysine biosynthesis, transport and catabolism; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_012062837.1
COORDINATES: protein motif:HMM:NF013862.2
COORDINATES: similar to AA sequence:RefSeq:WP_009892319.1
aminotransferase class V-fold PLP-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_009893646.1
COORDINATES: similar to AA sequence:RefSeq:WP_013389090.1
COORDINATES: similar to AA sequence:RefSeq:WP_013389089.1
COORDINATES: protein motif:HMM:NF013432.2
COORDINATES: similar to AA sequence:RefSeq:WP_004339824.1
GO:0008168 - methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013701613.1
COORDINATES: protein motif:HMM:NF012745.2
COORDINATES: similar to AA sequence:RefSeq:WP_014296657.1
COORDINATES: similar to AA sequence:RefSeq:WP_015005199.1
COORDINATES: protein motif:HMM:NF015058.2
COORDINATES: protein motif:HMM:NF024832.2
GO:0016740 - transferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018248087.1
COORDINATES: protein motif:HMM:NF016027.2
GO:0016758 - hexosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009120687.1
GO:0008446 - GDP-mannose 4,6-dehydratase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03025.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003678 - DNA helicase activity [Evidence IEA]
GO:0032508 - DNA duplex unwinding [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]
exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
COORDINATES: protein motif:HMM:NF022694.2
COORDINATES: similar to AA sequence:RefSeq:WP_013007459.1
COORDINATES: similar to AA sequence:RefSeq:WP_018294488.1
COORDINATES: similar to AA sequence:RefSeq:WP_020875582.1
COORDINATES: protein motif:HMM:NF033480.1
bifunctional lysylphosphatidylglycerol flippase/synthetase MprF
COORDINATES: protein motif:HMM:NF012376.2
COORDINATES: protein motif:HMM:NF024785.2
ATP phosphoribosyltransferase regulatory subunit
COORDINATES: similar to AA sequence:RefSeq:WP_013114415.1
GO:0003879 - ATP phosphoribosyltransferase activity [Evidence IEA]
GO:0000105 - histidine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005358493.1
GO:0004399 - histidinol dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009726306.1
GO:0004400 - histidinol-phosphate transaminase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009610409.1
GO:0004424 - imidazoleglycerol-phosphate dehydratase activity [Evidence IEA]
imidazoleglycerol-phosphate dehydratase HisB
COORDINATES: similar to AA sequence:RefSeq:WP_003436678.1
GO:0016884 - carbon-nitrogen ligase activity, with glutamine as amido-N-donor [Evidence IEA]; GO:0000107 - imidazoleglycerol-phosphate synthase activity [Evidence IEA]
imidazole glycerol phosphate synthase subunit HisH
COORDINATES: similar to AA sequence:RefSeq:WP_003358672.1
GO:0003949 - 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase activity [Evidence IEA]
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_015769457.1
GO:0000107 - imidazoleglycerol-phosphate synthase activity [Evidence IEA]
imidazole glycerol phosphate synthase subunit HisF
COORDINATES: similar to AA sequence:RefSeq:WP_017187685.1
GO:0004635 - phosphoribosyl-AMP cyclohydrolase activity [Evidence IEA]; GO:0004636 - phosphoribosyl-ATP diphosphatase activity [Evidence IEA]
bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE
COORDINATES: similar to AA sequence:RefSeq:WP_015324581.1
COORDINATES: similar to AA sequence:RefSeq:WP_013389191.1
COORDINATES: similar to AA sequence:RefSeq:WP_013389125.1
COORDINATES: similar to AA sequence:RefSeq:WP_013389126.1
COORDINATES: similar to AA sequence:RefSeq:WP_013389123.1
COORDINATES: similar to AA sequence:RefSeq:WP_013389124.1
COORDINATES: similar to AA sequence:RefSeq:WP_013387546.1
COORDINATES: similar to AA sequence:RefSeq:WP_013387547.1
2-oxoacid:acceptor oxidoreductase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_019227050.1
2-oxoacid:ferredoxin oxidoreductase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_013386548.1
GO:0016903 - oxidoreductase activity, acting on the aldehyde or oxo group of donors [Evidence IEA]
2-oxoacid:acceptor oxidoreductase family protein
COORDINATES: protein motif:HMM:NF019314.2
COORDINATES: similar to AA sequence:RefSeq:WP_013389130.1
GO:0008171 - O-methyltransferase activity [Evidence IEA]
GO:0009102 - biotin biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013386688.1
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0004076 - biotin synthase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018579098.1
sodium ion-translocating decarboxylase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_013386759.1
COORDINATES: similar to AA sequence:RefSeq:WP_013386758.1
COORDINATES: similar to AA sequence:RefSeq:WP_007946015.1
GO:0016874 - ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012065499.1
COORDINATES: similar to AA sequence:RefSeq:WP_006569598.1
GO:0016772 - transferase activity, transferring phosphorus-containing groups [Evidence IEA]
GO:1903826 - L-arginine transmembrane transport [Evidence IEA]; GO:0015819 - lysine transport [Evidence IEA]; GO:0015822 - ornithine transport [Evidence IEA]
methylmalonyl Co-A mutase-associated GTPase MeaB
COORDINATES: similar to AA sequence:RefSeq:WP_012158314.1
cobalamin B12-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012158313.1
COORDINATES: similar to AA sequence:RefSeq:WP_018703398.1
acetyl-CoA hydrolase/transferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013387975.1
COORDINATES: similar to AA sequence:RefSeq:WP_013388128.1
COORDINATES: protein motif:HMM:NF022591.2
COORDINATES: similar to AA sequence:RefSeq:WP_014769734.1
COORDINATES: similar to AA sequence:RefSeq:WP_014793438.1
COORDINATES: similar to AA sequence:RefSeq:WP_009292641.1
GO:0008998 - ribonucleoside-triphosphate reductase activity [Evidence IEA]
anaerobic ribonucleoside triphosphate reductase
COORDINATES: similar to AA sequence:RefSeq:WP_008641262.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]
GO:0009265 - 2'-deoxyribonucleotide biosynthetic process [Evidence IEA]; GO:0051353 - positive regulation of oxidoreductase activity [Evidence IEA]
anaerobic ribonucleoside-triphosphate reductase activating protein
COORDINATES: similar to AA sequence:RefSeq:WP_013777696.1
COORDINATES: similar to AA sequence:RefSeq:WP_017415469.1
COORDINATES: similar to AA sequence:RefSeq:WP_003487024.1
COORDINATES: similar to AA sequence:RefSeq:WP_012862519.1
COORDINATES: similar to AA sequence:RefSeq:WP_011017009.1
lipopolysaccharide core heptose(II) kinase RfaY
COORDINATES: similar to AA sequence:RefSeq:WP_008699269.1
COORDINATES: similar to AA sequence:RefSeq:WP_008794209.1
COORDINATES: similar to AA sequence:RefSeq:WP_005981672.1
COORDINATES: similar to AA sequence:RefSeq:WP_012208763.1
GO:0008483 - transaminase activity [Evidence IEA]
DegT/DnrJ/EryC1/StrS family aminotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_001084197.1
COORDINATES: similar to AA sequence:RefSeq:WP_005947315.1
COORDINATES: similar to AA sequence:RefSeq:WP_006881443.1
polysaccharide pyruvyl transferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_005981186.1
COORDINATES: protein motif:HMM:NF013341.2
COORDINATES: similar to AA sequence:RefSeq:WP_005948501.1
COORDINATES: protein motif:HMM:NF004231.0
GO:0010181 - FMN binding [Evidence IEA]; GO:0004733 - pyridoxamine-phosphate oxidase activity [Evidence IEA]
GO:0008615 - pyridoxine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013174159.1
GO:0016780 - phosphotransferase activity, for other substituted phosphate groups [Evidence IEA]
GO:0008654 - phospholipid biosynthetic process [Evidence IEA]
CDP-alcohol phosphatidyltransferase family protein
COORDINATES: protein motif:HMM:NF008633.0
COORDINATES: similar to AA sequence:RefSeq:WP_003408617.1
COORDINATES: protein motif:HMM:NF020893.2
COORDINATES: similar to AA sequence:RefSeq:WP_010194994.1
GO:0004000 - adenosine deaminase activity [Evidence IEA]
GO:0043101 - purine-containing compound salvage [Evidence IEA]
COORDINATES: protein motif:HMM:NF012792.2
COORDINATES: similar to AA sequence:RefSeq:WP_019242598.1
GO:0003978 - UDP-glucose 4-epimerase activity [Evidence IEA]
GO:0006012 - galactose metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014967188.1
COORDINATES: protein motif:HMM:TIGR00704.1
GO:0005436 - sodium:phosphate symporter activity [Evidence IEA]
GO:0044341 - sodium-dependent phosphate transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009423073.1
GO:0003938 - IMP dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005951596.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]
GO:0006457 - protein folding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013389121.1
COORDINATES: similar to AA sequence:RefSeq:WP_020152823.1
GO:0016209 - antioxidant activity [Evidence IEA]; GO:0016151 - nickel cation binding [Evidence IEA]; GO:0004784 - superoxide dismutase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01198.1
GO:0017057 - 6-phosphogluconolactonase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00871.1
GO:0004345 - glucose-6-phosphate dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020374454.1
GO:0004616 - phosphogluconate dehydrogenase (decarboxylating) activity [Evidence IEA]
decarboxylating 6-phosphogluconate dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_005977690.1
COORDINATES: similar to AA sequence:RefSeq:WP_008820954.1
GO:0016783 - sulfurtransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]
GO:0008033 - tRNA processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005951602.1
GO:0006865 - amino acid transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005587905.1
COORDINATES: similar to AA sequence:RefSeq:WP_005885039.1
COORDINATES: similar to AA sequence:RefSeq:WP_005958813.1
COORDINATES: similar to AA sequence:RefSeq:WP_005886573.1
COORDINATES: similar to AA sequence:RefSeq:WP_005886572.1
GO:0008929 - methylglyoxal synthase activity [Evidence IEA]
GO:0006007 - glucose catabolic process [Evidence IEA]; GO:0019242 - methylglyoxal biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013980.2
COORDINATES: similar to AA sequence:RefSeq:WP_005976103.1
GO:0004516 - nicotinate phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005961452.1
GO:0004045 - aminoacyl-tRNA hydrolase activity [Evidence IEA]
GO:0008152 - metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008696957.1
COORDINATES: similar to AA sequence:RefSeq:WP_019224690.1
COORDINATES: protein motif:HMM:NF023496.2