Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), complete sequence.
type: Entry
definition: Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), complete sequence.
sequence version: NC_012751.1
sequence date: 2023-02-22
sequence: sequence
division: CON
label: NC_012751.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN02604135
keyword: RefSeq
source: Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)
organism: Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)
taxonomy: Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; aphid secondary symbionts; Candidatus Hamiltonella.
reference: 1
references: 19451630
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP001277.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\nDNA Source: Nancy Moran, University of Arizona.\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 02/22/2023 13:47:51\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 2,212\nCDSs (total) :: 2,158\nGenes (coding) :: 2,001\nCDSs (with protein) :: 2,001\nGenes (RNA) :: 54\nrRNAs :: 3, 3, 3 (5S, 16S, 23S)\ncomplete rRNAs :: 3, 3, 3 (5S, 16S, 23S)\ntRNAs :: 41\nncRNAs :: 4\nPseudo Genes (total) :: 157\nCDSs (without protein) :: 157\nPseudo Genes (ambiguous residues) :: 1 of 157\nPseudo Genes (frameshifted) :: 64 of 157\nPseudo Genes (incomplete) :: 107 of 157\nPseudo Genes (internal stop) :: 32 of 157\nPseudo Genes (multiple problems) :: 39 of 157\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 2110331
topology: circular
so has quality: SO_0000988
location: order(1..1498802,1538670..2110331)
location: region:1-2110331:1
RO_0002162: 572265

NC_012751
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN02604135
type: BioSample
SIO_000068: biosample

1
title: Hamiltonella defensa, genome evolution of protective bacterial endosymbiont from pathogenic ancestors
author: Degnan, P.H.
author: Yu, Y.
author: Sisneros, N.
author: Wing, R.A.
author: Moran, N.A.
journal: Proc Natl Acad Sci U S A
volume: 106
issue: 22
pages: 9063-9068
year: 2009
pubmed: 19451630

19451630
type: PubMed
SIO_000068: pubmed

2
title: Direct Submission
author: Degnan, P.H.
author: Moran, N.A.
journal: Submitted (05-DEC-2008) Department of Ecology and Evolutionary Biology, University of Arizona, 1041 E Lowell St, Tucson, AZ 85721-0088, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2110331:1
position: 2110331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-2110331:1:source
so part of: sequence
organism: Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)
mol type: genomic DNA
strain: T5A
host: Acyrthosiphon pisum
country: USA:Madison, WI
focus: true
note: secondary endosymbiont of aphids

572265
type: Taxonomy
SIO_000068: taxonomy

source
type: Source
subclass of: SO_2000061
RO_0002162: 572265
organism: Bacteriophage APSE-2
mol type: genomic DNA
so part of: sequence
location: 1498803..1538669
location: region:1498803-1538669:1
so has part: feature:1498803-1538669:1:region

340054
type: Taxonomy
SIO_000068: taxonomy

position:1498803:1
position: 1498803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1538669:1
position: 1538669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1498803-1538669:1:region

HDEF_RS00165
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: mioC
locus tag: HDEF_RS00165
old locus tag: HDEF_0001
so part of: sequence
location: complement(1..468)
location: region:1-468:-1
so has part: feature:1-468:-1:exon
subclass of: SO_0000010

66259947
type: Gene
SIO_000068: ncbigene

position:1:-1
position: 1
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:468:-1
position: 468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-468:-1:exon

HDEF_RS00165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: mioC
locus tag: HDEF_RS00165
old locus tag: HDEF_0001
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016858253.1
GO function: GO:0010181 - FMN binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FMN-binding protein MioC
translation: MTSMTFITGSTLGNSEYVAEHLSEKLTEMGFVTKIFHGPQLSELNLSGLWCVITSTHGAGDLPDNIKPLFKQIIEDQPDLSKIRFGSIGLGSSDYGDTFCKGIKKLDQQLILKGAQRIGEILKIDVIEHENPEDPAEEWIKNWINLNKNFLISCG
SIO_010081: HDEF_RS00165
subclass of: SO_0000673
so part of: HDEF_RS00165
location: complement(1..468)
location: region:1-468:-1
so has part: feature:1-468:-1:exon

WP_012737746.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1-468:-1:exon

HDEF_RS00170
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS00170
old locus tag: HDEF_0002
so part of: sequence
location: 817..1650
location: region:817-1650:1
so has part: feature:817-1650:1:exon
subclass of: SO_0000010

66259948
type: Gene
SIO_000068: ncbigene

position:817:1
position: 817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1650:1
position: 1650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:817-1650:1:exon

HDEF_RS00170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS00170
old locus tag: HDEF_0002
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016858247.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter substrate-binding protein
translation: MNYRALMLTLLTLLIPFSVMVKADKLNDIKKAGKIRVAVFDNNPPFGYYDPKTKKLIGYDVDIAHAIGKAFGVNIEFVETNPANRIPLLKSKKVDLIAANFTITPERAKEVDFSLPYFSTGQKFIAKKGVLKKPDDLKSLRIGADKGTVQEITLRENYPSAIVISYDDTPQAFMALRNENVQAITQDDAKLVGLMGNLKAEMKASFEISHFSITKEYQGIATAKGEKNLINAINTILLKMEKEGEAVKIYNRWFGPDTKTAQPRGDFKFIPLVESNR
SIO_010081: HDEF_RS00170
subclass of: SO_0000673
so part of: HDEF_RS00170
location: 817..1650
location: region:817-1650:1
so has part: feature:817-1650:1:exon

WP_012737747.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:817-1650:1:exon

HDEF_RS00175
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS00175
old locus tag: HDEF_0003
so part of: sequence
location: 1791..2534
location: region:1791-2534:1
so has part: feature:1791-2534:1:exon
subclass of: SO_0000010

66259949
type: Gene
SIO_000068: ncbigene

position:1791:1
position: 1791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2534:1
position: 2534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1791-2534:1:exon

HDEF_RS00175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS00175
old locus tag: HDEF_0003
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012737748.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: amino acid ABC transporter permease
translation: MNFPLSYLIDEFLDTKYIIWLWDGFLITLYISVCTVIFSTLLGIFLAVARESDFKAQRVMVTCYCMLFRNTPLLVQLFFWYFGSGQILPSSWMQWLNSPHELVIFYFTFHWPSFEFLSGLIGLTLYSSAFIAEEFRAGIAGVGLGQKNAAQALGLTHWQSMKYVIFPQALKIALPPLLGQYMYIIKNSSLTMAIGVAELSYASRQVETETLRTFQAFGVATFLYILLIALIEAWNTWHHQRVLRKWH
SIO_010081: HDEF_RS00175
subclass of: SO_0000673
so part of: HDEF_RS00175
location: 1791..2534
location: region:1791-2534:1
so has part: feature:1791-2534:1:exon

WP_012737748.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1791-2534:1:exon

HDEF_RS00180
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS00180
old locus tag: HDEF_0004
so part of: sequence
location: 2536..3213
location: region:2536-3213:1
so has part: feature:2536-3213:1:exon
subclass of: SO_0000010

66259950
type: Gene
SIO_000068: ncbigene

position:2536:1
position: 2536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3213:1
position: 3213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2536-3213:1:exon

HDEF_RS00180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS00180
old locus tag: HDEF_0004
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016858016.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: amino acid ABC transporter permease
translation: MDFSVISENWRYLLCGAYPDGPIGGAALTLWISILAGIASSVLGVIWGIGLALSRGICSGILSAVLGFFRAIPVIMLIFWIYFLLPIAFGWDIPKITTVVCGLALITSAYLAHAVKSGIVAVGQGQWSAGLSLGLNSWQILRFIILPQVLRVMFPSFVNQWISLIKDTSLAYIVGVNELTFLATQVNNRTMVHSMEVFLFVGLIYFILCFILDFSVNYFLKKDTY
SIO_010081: HDEF_RS00180
subclass of: SO_0000673
so part of: HDEF_RS00180
location: 2536..3213
location: region:2536-3213:1
so has part: feature:2536-3213:1:exon

WP_012737749.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2536-3213:1:exon

HDEF_RS00185
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: lysA
locus tag: HDEF_RS00185
old locus tag: HDEF_0005
pseudo: true
so part of: sequence
location: complement(3210..4471)
location: region:3210-4471:-1
so has part: feature:3210-4471:-1:exon
subclass of: SO_0000010

66259951
type: Gene
SIO_000068: ncbigene

position:3210:-1
position: 3210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4471:-1
position: 4471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3210-4471:-1:exon

HDEF_RS00185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: lysA
locus tag: HDEF_RS00185
old locus tag: HDEF_0005
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016858015.1
GO function: GO:0008836 - diaminopimelate decarboxylase activity [Evidence IEA]
GO process: GO:0009089 - lysine biosynthetic process via diaminopimelate [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: diaminopimelate decarboxylase
SIO_010081: HDEF_RS00185
subclass of: SO_0000673
so part of: HDEF_RS00185
location: complement(3210..4471)
location: region:3210-4471:-1
so has part: feature:3210-4471:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3210-4471:-1:exon

HDEF_RS00190
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS00190
old locus tag: HDEF_0006
so part of: sequence
location: complement(4537..5013)
location: region:4537-5013:-1
so has part: feature:4537-5013:-1:exon
subclass of: SO_0000010

66259952
type: Gene
SIO_000068: ncbigene

position:4537:-1
position: 4537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5013:-1
position: 5013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4537-5013:-1:exon

HDEF_RS00190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS00190
old locus tag: HDEF_0006
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSKKIIYYYILIIFFGILTGGVCGFIYAYYHPMDEISGYWKTNYFFSTPVGLYHINTHVHINGRTITLSSDLYDQKSNLKINQNSVYTIIDISDRVFSEKSESFITDKVQNDETLDSLFKAPFSISRPTFYFLDENTVLVDQSQGLMILSARLWQRSR
SIO_010081: HDEF_RS00190
subclass of: SO_0000673
so part of: HDEF_RS00190
location: complement(4537..5013)
location: region:4537-5013:-1
so has part: feature:4537-5013:-1:exon

WP_012737750.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4537-5013:-1:exon

HDEF_RS00195
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS00195
old locus tag: HDEF_0007
so part of: sequence
location: complement(5243..5656)
location: region:5243-5656:-1
so has part: feature:5243-5656:-1:exon
subclass of: SO_0000010

66259953
type: Gene
SIO_000068: ncbigene

position:5243:-1
position: 5243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5656:-1
position: 5656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5243-5656:-1:exon

HDEF_RS00195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS00195
old locus tag: HDEF_0007
inference: COORDINATES: protein motif:HMM:NF012698.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: winged helix-turn-helix domain-containing protein
translation: MKNIFIGNSLFIPKTRVIKQEGREIKIRNKESELLFLLCKKYPNHISREEIEKQIWTQTYVTDNTLTQTISNLRNGLNDKKHEIIITIPKKGYCLNIEPKFIDDEKIKIENLNSDFKKNSTLKNIPFLKMDLLLHIY
SIO_010081: HDEF_RS00195
subclass of: SO_0000673
so part of: HDEF_RS00195
location: complement(5243..5656)
location: region:5243-5656:-1
so has part: feature:5243-5656:-1:exon

WP_012737751.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5243-5656:-1:exon

HDEF_RS00200
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS00200
pseudo: true
so part of: sequence
location: complement(5869..6302)
location: region:5869-6302:-1
so has part: feature:5869-6302:-1:exon
subclass of: SO_0000010

66259954
type: Gene
SIO_000068: ncbigene

position:5869:-1
position: 5869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6302:-1
position: 6302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5869-6302:-1:exon

HDEF_RS00200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS00200
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006705368.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
SIO_010081: HDEF_RS00200
subclass of: SO_0000673
so part of: HDEF_RS00200
location: complement(5869..6302)
location: region:5869-6302:-1
so has part: feature:5869-6302:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5869-6302:-1:exon

HDEF_RS00205
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: lysS
locus tag: HDEF_RS00205
old locus tag: HDEF_0009
so part of: sequence
location: complement(6813..8327)
location: region:6813-8327:-1
so has part: feature:6813-8327:-1:exon
subclass of: SO_0000010

66259955
type: Gene
SIO_000068: ncbigene

position:6813:-1
position: 6813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8327:-1
position: 8327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6813-8327:-1:exon

HDEF_RS00205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: lysS
locus tag: HDEF_RS00205
old locus tag: HDEF_0009
EC number: 6.1.1.6
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011817018.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004824 - lysine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006430 - lysyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lysine--tRNA ligase
translation: MSEEKISITERKELNHELQTRREKLALLRKKSFAFPNDFRQKHFSGDLHTEYDHKENEELIALNKEVILAGRMMTRRIMGKASFFTLQDTKGRIQLYVSRDDLPEGIYNEDFKKWDLGDILGVRGRLFKTKTGELSVHCTELRLLTKALRPLPDKFHGLLDQEARYRQRYLDLIVNEKSRKNFILRSKTISMLRQFMMGKGFMEVETPMMQSIPGGAAARPFLTHHNALNIDMYLRIAPELYLKRLVVGGFDRIFEINRNFRNEGISLRHNPEFTMMELYMAYADHQDLIELTEELFRELTLNVLGTHVVKYGEHIFDFSQPFQKWTMKEAIQKYRPEININDLEDKNKAILIAESLDVRVEKFWELGRIQCEIFEETAEKHLIQPTFITEYPAEVSPLARRNDHNSFIADRFEFFIAGKEIGNGFSELNDAEDQAQRFTEQLNSKEKGDHEAMSYDQDYIIALEHGLPPTAGLGIGIDRMIMLLTNSINIRDVILFPTMRPLK
SIO_010081: HDEF_RS00205
subclass of: SO_0000673
so part of: HDEF_RS00205
location: complement(6813..8327)
location: region:6813-8327:-1
so has part: feature:6813-8327:-1:exon

WP_012737753.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6813-8327:-1:exon

HDEF_RS00210
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: prfB
locus tag: HDEF_RS00210
old locus tag: HDEF_0010
so part of: sequence
location: complement(8337..9435)
location: region:8337-9435:-1
so has part: feature:8337-9435:-1:exon
subclass of: SO_0000010

66259956
type: Gene
SIO_000068: ncbigene

position:8337:-1
position: 8337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9435:-1
position: 9435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8337-9435:-1:exon

HDEF_RS00210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: prfB
locus tag: HDEF_RS00210
old locus tag: HDEF_0010
inference: COORDINATES: similar to AA sequence:RefSeq:NP_311790.1
ribosomal slippage: true
GO function: GO:0003747 - translation release factor activity [Evidence IEA]
GO process: GO:0006415 - translational termination [Evidence IEA]
note: programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peptide chain release factor 2
translation: MFEINLIKNQIQNFSDRAEALRGYLDYDEKKERLEEINAELEQPDIWKQPEWAQKLGKERAILQEIVETLSQLEKELKDVSTLLDLAIEAQDRETFNEAVFELEAIDKKLNRLEFRRMFSGKNDFADCYLDLQSGSGGTEAQDWANMLLRMYLRWADSKGFKTEIIEISDGEVAGIKSATLKITGDHAFGWLRTETGVHRLVRKSPFDSGARRHTSFASAFVYPELEDNIDIDINPADLRIDVYRASGAGGQHINKTESAVRITHLPTNIVTQCQSDRSQHKNKEQAFKQLKAKLYEFEMQKKNADKKIMEDNKSDIGWGSQIRSYILDDSRIKDLRTGLETRNTQAVLDGYLDKFIEASLKAGL
SIO_010081: HDEF_RS00210
subclass of: SO_0000673
so part of: HDEF_RS00210
location: complement(join(8337..9359,9361..9435))
location: region:8337-9435:-1
so has part: feature:9361-9435:-1:exon
so has part: feature:8337-9359:-1:exon

WP_100102834.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9361-9435:-1:exon

position:9361:-1
position: 9361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8337-9359:-1:exon

position:9359:-1
position: 9359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HDEF_RS00215
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: alaS
locus tag: HDEF_RS00215
old locus tag: HDEF_0012
so part of: sequence
location: 9713..12340
location: region:9713-12340:1
so has part: feature:9713-12340:1:exon
subclass of: SO_0000010

66259957
type: Gene
SIO_000068: ncbigene

position:9713:1
position: 9713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12340:1
position: 12340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9713-12340:1:exon

HDEF_RS00215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: alaS
locus tag: HDEF_RS00215
old locus tag: HDEF_0012
EC number: 6.1.1.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005181993.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004813 - alanine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006419 - alanyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alanine--tRNA ligase
translation: MHNSTADIRQKFLDFFKSKGHQVVSSSSLIPHHDPTLLFTNAGMNPFKNIFLGIQDPDFSRATSSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQQAIYFAWELLTGSEWFHLPKDRLYVTVYSTDDEAYNIWADEIGIPRERIIRIGDNKGAAFCSDNFWQMGETGPCGPCSEIFYDHGDHLWGGLPGSPEEEGDRYIEIWNIVFMQFNRLADGTMLPLPKPSVDTGMGLERMAAVLQNVSSNYEIDLFRDLISGVKKVTGATDDSNPSLRVIADHIRACAFLIFDGVRPSNEGRGYVLRRIIRRAIRHGNKLGVKKPFFYQLLTSLIGVMKPITDQLKHHQVMIEQVLKTEEELFSHTLERGLSLLDKKLDHLKGDTLEGETAFLLYDTYGFPLDLTADVCRERNLKIDEVTFHQKMSEQRARARQASAFSTDYNKFIRVAHHTEFCGYEQLQQTTVIKALFFRGEEINEIHAGQEALVILDKTPFYAESGGQVGDKGYLKSTTAHFMVSDTQKYGQAIVHLGQPSKGSLRISDHIQACVNNKVRDHIRSNHSATHLLHAALRQVLGKHVVQKGSLVNEKCCRFDFSHFKMMTPDEIENVESLVNQQIRQNHLIETQIMSLEDAKKKGATALFGEKYEDQVRVLSMGDFSIELCGGTHARRTGDIGLFHITSESSTAAGIRRIEAITGEEANALLCQQRNVLQDLARLLKSDEKGLIERIGIIIDRNKVLEKKLQHFKDQEILQKTSLLLKNVKQIKEIKILIAQLDAVEPILLRRMIDDLKNQLGSAVILLANVTKNKISFIAGVTKNLTQQIKADDLIHYIAPKIGGKGGGRADMAQAGGTNINSLATVLAEAEKWIVSHS
SIO_010081: HDEF_RS00215
subclass of: SO_0000673
so part of: HDEF_RS00215
location: 9713..12340
location: region:9713-12340:1
so has part: feature:9713-12340:1:exon

WP_012737756.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9713-12340:1:exon

HDEF_RS00220
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: csrA
locus tag: HDEF_RS00220
old locus tag: HDEF_0013
pseudo: true
so part of: sequence
location: 12533..>12712
location: region:12533-12712:1
so has part: feature:12533-12712:1:exon
subclass of: SO_0000010

66259958
type: Gene
SIO_000068: ncbigene

position:12533:1
position: 12533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12712:1
position: 12712
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12533-12712:1:exon

HDEF_RS00220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: csrA
locus tag: HDEF_RS00220
old locus tag: HDEF_0013
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011053910.1
GO function: GO:0003723 - RNA binding [Evidence IEA]
GO process: GO:0006402 - mRNA catabolic process [Evidence IEA]; GO:0006109 - regulation of carbohydrate metabolic process [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: carbon storage regulator CsrA
SIO_010081: HDEF_RS00220
subclass of: SO_0000673
so part of: HDEF_RS00220
location: 12533..>12712
location: region:12533-12712:1
so has part: feature:12533-12712:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12533-12712:1:exon

HDEF_RS00225
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS00225
old locus tag: HDEF_0014
so part of: sequence
location: 13000..13092
location: region:13000-13092:1
so has part: feature:13000-13092:1:exon
subclass of: SO_0000663

66259959
type: Gene
SIO_000068: ncbigene

position:13000:1
position: 13000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13092:1
position: 13092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13000-13092:1:exon

HDEF_RS00225
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 572265
locus tag: HDEF_RS00225
old locus tag: HDEF_0014
product: tRNA-Ser
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:13034..13036,aa:Ser,seq:gct)
SIO_010081: HDEF_RS00225
subclass of: SO_0000673
so part of: HDEF_RS00225
location: 13000..13092
location: region:13000-13092:1
so has part: feature:13000-13092:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13000-13092:1:exon

HDEF_RS00230
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS00230
old locus tag: HDEF_0015
so part of: sequence
location: 13102..13178
location: region:13102-13178:1
so has part: feature:13102-13178:1:exon
subclass of: SO_0000663

66259960
type: Gene
SIO_000068: ncbigene

position:13102:1
position: 13102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13178:1
position: 13178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13102-13178:1:exon

HDEF_RS00230
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 572265
locus tag: HDEF_RS00230
old locus tag: HDEF_0015
product: tRNA-Arg
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:13136..13138,aa:Arg,seq:acg)
SIO_010081: HDEF_RS00230
subclass of: SO_0000673
so part of: HDEF_RS00230
location: 13102..13178
location: region:13102-13178:1
so has part: feature:13102-13178:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13102-13178:1:exon

HDEF_RS00235
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS00235
old locus tag: HDEF_0016
so part of: sequence
location: complement(13264..15030)
location: region:13264-15030:-1
so has part: feature:13264-15030:-1:exon
subclass of: SO_0000010

66259961
type: Gene
SIO_000068: ncbigene

position:13264:-1
position: 13264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15030:-1
position: 15030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13264-15030:-1:exon

HDEF_RS00235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS00235
old locus tag: HDEF_0016
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013509373.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0051139 - metal cation:proton antiporter activity [Evidence IEA]
GO process: GO:0006884 - cell volume homeostasis [Evidence IEA]; GO:0006813 - potassium ion transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: potassium/proton antiporter
translation: MNAITINNLFLIGSILVGTSILLSSLSSRLGIPILVIFLAIGMLAGGEGVGGIAFDNYPIAYLISNLALAVILLDGGMRTRASSFRVALWPALSLATVGVMITTSLTGVMAAWLFHLDIIQGLLIGAIIGSTDAAAVFSLLGGKGLNERVSATLEIESGSNDPMAVFLTITLISMISNGQTHLDWMFLVDLLQQFGLGILIGLGGGRLLLLLINRMNLANGLYPLLALAGGLVTFSLTTSMNGSGILSVYLCGLVLGNRPIRNRFGILHTLDGLAWLSQIGMFLVLGLLINPTDLITIAIPALLLSLWMILFARPLSVFIGLLPFHSFNFRERIFISWVGLRGAVPIILAVFPMMAGLANAHLFFNVAFFIVLISLLVQGSTLSFAARKTKLVVPPRLAPISRVGLDIDINNEWEQFTYQLSSDQWCVGAALRDLEMPEGTRISGLFRDKNLLHPTGSTRLKDGDILCVIGHERDLPALGKLFSHTPRVQIDERFFGDFILDADAKLEEISRIYGLNLEKVADQQKSLGEFVIYLLEKEPVIGDQINWDGLTWTIAEMESQRVSKVGIKIMRDKKRSKISDESTKPIN
SIO_010081: HDEF_RS00235
subclass of: SO_0000673
so part of: HDEF_RS00235
location: complement(13264..15030)
location: region:13264-15030:-1
so has part: feature:13264-15030:-1:exon

WP_044612421.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13264-15030:-1:exon

HDEF_RS00240
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS00240
old locus tag: HDEF_0017
so part of: sequence
location: complement(15234..15839)
location: region:15234-15839:-1
so has part: feature:15234-15839:-1:exon
subclass of: SO_0000010

66259962
type: Gene
SIO_000068: ncbigene

position:15234:-1
position: 15234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15839:-1
position: 15839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15234-15839:-1:exon

HDEF_RS00240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS00240
old locus tag: HDEF_0017
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857658.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA translocase FtsK 4TM domain-containing protein
translation: MDQEKNNIKENTLFIKKKGFESVLAILCIFATYLMLILFSFDPSDPSWFQTAWHDSVHNPGGHVGAYIAGLLFFIFGLCAYALSPVIFLFCGTIFYENKNKKSKNYFRLSFRLMGSILLIFASCSLITPSFNDFYYFLSGGLLGYVVNHEMLFHFNHLTITMLFLLIWALGATLLTGYSWLLLAEKIGVYTIRLVFFIRTL
SIO_010081: HDEF_RS00240
subclass of: SO_0000673
so part of: HDEF_RS00240
location: complement(15234..15839)
location: region:15234-15839:-1
so has part: feature:15234-15839:-1:exon

WP_012737759.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15234-15839:-1:exon

HDEF_RS00245
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: trxB
locus tag: HDEF_RS00245
old locus tag: HDEF_0018
pseudo: true
so part of: sequence
location: 16087..17061
location: region:16087-17061:1
so has part: feature:16087-17061:1:exon
subclass of: SO_0000010

66259963
type: Gene
SIO_000068: ncbigene

position:16087:1
position: 16087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17061:1
position: 17061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16087-17061:1:exon

HDEF_RS00245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: trxB
locus tag: HDEF_RS00245
old locus tag: HDEF_0018
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857657.1
GO function: GO:0004791 - thioredoxin-disulfide reductase activity [Evidence IEA]
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: thioredoxin-disulfide reductase
SIO_010081: HDEF_RS00245
subclass of: SO_0000673
so part of: HDEF_RS00245
location: 16087..17061
location: region:16087-17061:1
so has part: feature:16087-17061:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16087-17061:1:exon

HDEF_RS00250
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: minC
locus tag: HDEF_RS00250
old locus tag: HDEF_0020
so part of: sequence
location: 17243..17956
location: region:17243-17956:1
so has part: feature:17243-17956:1:exon
subclass of: SO_0000010

66259964
type: Gene
SIO_000068: ncbigene

position:17243:1
position: 17243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17956:1
position: 17956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17243-17956:1:exon

HDEF_RS00250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: minC
locus tag: HDEF_RS00250
old locus tag: HDEF_0020
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857454.1
GO function: GO:0004857 - enzyme inhibitor activity [Evidence IEA]
GO process: GO:0000918 - division septum site selection [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: septum site-determining protein MinC
translation: MSKPLIKLLESSIELKGCSFTLTVIHLLDSRPELIRHALQKKIEQAPDFLESAPVVINISALSKEANWHEIHKAVISTGLKLVGISGCKDENQKQALVALGLPFMNEGKTQQWISKKEPSPKKDFSKTQIIHSLVRSGQQIYARNSDLVVINNVSAGAELIADGNIHVYGIMGGRALAGASGDIESEIFLTHCAAELIAIAGEYVSHDHISPEYLGQAVHLRLLNKTLIFKRFDSIF
SIO_010081: HDEF_RS00250
subclass of: SO_0000673
so part of: HDEF_RS00250
location: 17243..17956
location: region:17243-17956:1
so has part: feature:17243-17956:1:exon

WP_012737761.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17243-17956:1:exon

HDEF_RS00255
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: minD
locus tag: HDEF_RS00255
old locus tag: HDEF_0021
so part of: sequence
location: 17973..18785
location: region:17973-18785:1
so has part: feature:17973-18785:1:exon
subclass of: SO_0000010

66259965
type: Gene
SIO_000068: ncbigene

position:17973:1
position: 17973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18785:1
position: 18785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17973-18785:1:exon

HDEF_RS00255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: minD
locus tag: HDEF_RS00255
old locus tag: HDEF_0021
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020801817.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: septum site-determining protein MinD
translation: MARVIVVTSGKGGVGKTTSSAAIATGLASKGKKTVVIDFDIGLRNLDLIMGCERRVVYDFINVIQNDATLNQALIKDKRVENLYILPASQTRDKDALTQKGVAAVFEQLNKMNFDFIICDSPAGIETGALMALYFADEAIITTNPEVSSVRDSDRILGILAAKSSRSEKGEAPVKEHLLLTRYNPTRVARGDMLSTEDVLDILRIPLIGVIPEDQSVLRASNQGEPVILDLTSDAAKAYSDTVDRLLGEDRDFRFVQEEKKSFLKRIFGG
SIO_010081: HDEF_RS00255
subclass of: SO_0000673
so part of: HDEF_RS00255
location: 17973..18785
location: region:17973-18785:1
so has part: feature:17973-18785:1:exon

WP_012737762.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17973-18785:1:exon

HDEF_RS00260
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: minE
locus tag: HDEF_RS00260
old locus tag: HDEF_0022
so part of: sequence
location: 18789..19073
location: region:18789-19073:1
so has part: feature:18789-19073:1:exon
subclass of: SO_0000010

66259966
type: Gene
SIO_000068: ncbigene

position:18789:1
position: 18789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19073:1
position: 19073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18789-19073:1:exon

HDEF_RS00260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: minE
locus tag: HDEF_RS00260
old locus tag: HDEF_0022
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012737763.1
GO process: GO:0032955 - regulation of division septum assembly [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cell division topological specificity factor MinE
translation: MGFFDFFSPDKKNSAANIAKDRLQIIVRERRCCDRDPLYLSDMKRDILAVICKYVQLDPNALHVQFEQKEDDVSVLELNVILPEVSSTGDCSKP
SIO_010081: HDEF_RS00260
subclass of: SO_0000673
so part of: HDEF_RS00260
location: 18789..19073
location: region:18789-19073:1
so has part: feature:18789-19073:1:exon

WP_012737763.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18789-19073:1:exon

HDEF_RS00265
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: gap
locus tag: HDEF_RS00265
old locus tag: HDEF_0023
so part of: sequence
location: complement(19273..20265)
location: region:19273-20265:-1
so has part: feature:19273-20265:-1:exon
subclass of: SO_0000010

66259967
type: Gene
SIO_000068: ncbigene

position:19273:-1
position: 19273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20265:-1
position: 20265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19273-20265:-1:exon

HDEF_RS00265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: gap
locus tag: HDEF_RS00265
old locus tag: HDEF_0023
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012737764.1
GO process: GO:0006094 - gluconeogenesis [Evidence IEA]; GO:0019682 - glyceraldehyde-3-phosphate metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type I glyceraldehyde-3-phosphate dehydrogenase
translation: MSIKVGINGFGRIGRIVFRAAQERTDIEVVAINDLLKAEYMAYMLKYDSTHGRFKGTIDVEGNDLVVNNKKVRVTSEQKPESINWGALGIDVVIEATGFFLKKEEATKHLNAGAKKVLISAPPKDDTPMFVMGVNHNQYAGQKIVSNASCTTNCLAPLAKVVHDKFGIIEGLMTTVHATTATQRTVDGPSAKDWRGGRGAAQNIIPSSTGAAKAVGKVIPSLNGKLTGMAFRVPTPNVSVVDLTVRLEKPASYSEICDAIKAASEGELKGILGYVDEEVVSTDFNGEKLTSIFDKKAGIELNNHFVKLVSWYDNETGYSNKLLDLVAHIK
SIO_010081: HDEF_RS00265
subclass of: SO_0000673
so part of: HDEF_RS00265
location: complement(19273..20265)
location: region:19273-20265:-1
so has part: feature:19273-20265:-1:exon

WP_012737764.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19273-20265:-1:exon

HDEF_RS00270
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS00270
old locus tag: HDEF_0024
so part of: sequence
location: complement(20522..21586)
location: region:20522-21586:-1
so has part: feature:20522-21586:-1:exon
subclass of: SO_0000010

66259968
type: Gene
SIO_000068: ncbigene

position:20522:-1
position: 20522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21586:-1
position: 21586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20522-21586:-1:exon

HDEF_RS00270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS00270
old locus tag: HDEF_0024
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857458.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AI-2E family transporter
translation: MLDMLLKWYRRHFTDPQVVALLIILVGGFCILYFLSGILAPLLVAIVLAYLLEWPTSKLQVLGCSRLCAVSIIQALFVGVGLLAIFVVVPNVWQQGMNLTSDMPKMLNQFNNFSSTLTKRYPTLVDAGIVDMIADNLRNRLAGVGDSVVKISLASLIGLLTLAIYLIVVPLMVFFLLKDKKQMLNNFQKILPRDRSLAGKVWKEMNQQITNYIRGKVLEMVIVAVATYLVFWILDMRYSLLLAVLVGFSVLIPYIGAVIVTIPVVLVAMFQWGIDAHFWTLLIAYLVVQALDSNLLVPVLFSEAVNLHPLMIILSVIIFGGLWGFWGVFFAIPLASLVKAVIQAWPKELTPKVK
SIO_010081: HDEF_RS00270
subclass of: SO_0000673
so part of: HDEF_RS00270
location: complement(20522..21586)
location: region:20522-21586:-1
so has part: feature:20522-21586:-1:exon

WP_012737765.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20522-21586:-1:exon

HDEF_RS00275
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: recA
locus tag: HDEF_RS00275
old locus tag: HDEF_0025
so part of: sequence
location: complement(21654..22718)
location: region:21654-22718:-1
so has part: feature:21654-22718:-1:exon
subclass of: SO_0000010

66259969
type: Gene
SIO_000068: ncbigene

position:21654:-1
position: 21654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22718:-1
position: 22718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21654-22718:-1:exon

HDEF_RS00275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: recA
locus tag: HDEF_RS00275
old locus tag: HDEF_0025
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012737766.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0008094 - ATP-dependent activity, acting on DNA [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0009432 - SOS response [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase RecA
translation: MIRDENKQKALAAALAQIEKQFGKGSIMRLGEDRSMDVETISTGSLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLQVIAAAQREGKVCAFIDAEHALDPVYAKKLGVDIDNLLCSQPDTGEQALEICDSLTRSGAVDVIIVDSVAALVPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLKNANTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRVGAIKEGEMVIGNDTRVKVVKNKIAAPFKQADFQILYGEGINTHGELIDLGVKHQLVEKAGSWYSYNGTKIGQGKSNVTEYLKTNPSIAAELDKILRNRLLNPVCEKDKTDLDPLDKIYHENSTAF
SIO_010081: HDEF_RS00275
subclass of: SO_0000673
so part of: HDEF_RS00275
location: complement(21654..22718)
location: region:21654-22718:-1
so has part: feature:21654-22718:-1:exon

WP_012737766.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21654-22718:-1:exon

HDEF_RS00280
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: aat
locus tag: HDEF_RS00280
old locus tag: HDEF_0026
so part of: sequence
location: 22978..23670
location: region:22978-23670:1
so has part: feature:22978-23670:1:exon
subclass of: SO_0000010

66259970
type: Gene
SIO_000068: ncbigene

position:22978:1
position: 22978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23670:1
position: 23670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22978-23670:1:exon

HDEF_RS00280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: aat
locus tag: HDEF_RS00280
old locus tag: HDEF_0026
EC number: 2.3.2.6
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012737767.1
GO function: GO:0008914 - leucyltransferase activity [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: leucyl/phenylalanyl-tRNA--protein transferase
translation: MFIKNLSKNIIDFPKPEKALKDPNGLLASGGDLSPERLLVAYQNGIFPWFNEGEPILWWSPDPRAVLLKCHVSRSMKRFIRPGRCPYHFSLNCAFSDVITTCATKRSGCTWISSDIVKAYCQLHRLGRAHSVEVWLKDKLVGGLYGISVGAMFCGESMFSIADNASKSALIIFEHYFTQKGGKWIDCQVLNAHTACLGAEQIPRNDFLSLLDQAQRVSLPKGVWSPQSLG
SIO_010081: HDEF_RS00280
subclass of: SO_0000673
so part of: HDEF_RS00280
location: 22978..23670
location: region:22978-23670:1
so has part: feature:22978-23670:1:exon

WP_012737767.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22978-23670:1:exon

HDEF_RS00285
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
alternative label: visB
gene: ubiH
locus tag: HDEF_RS00285
old locus tag: HDEF_0027
gene synonym: visB
so part of: sequence
location: complement(23655..24839)
location: region:23655-24839:-1
so has part: feature:23655-24839:-1:exon
subclass of: SO_0000010

66259971
type: Gene
SIO_000068: ncbigene

position:23655:-1
position: 23655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24839:-1
position: 24839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23655-24839:-1:exon

HDEF_RS00285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
alternative label: visB
gene: ubiH
locus tag: HDEF_RS00285
old locus tag: HDEF_0027
gene synonym: visB
EC number: 1.14.13.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857461.1
GO function: GO:0008681 - 2-octaprenyl-6-methoxyphenol hydroxylase activity [Evidence IEA]; GO:0071949 - FAD binding [Evidence IEA]; GO:0016709 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen [Evidence IEA]
GO process: GO:0006744 - ubiquinone biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 2-octaprenyl-6-methoxyphenyl hydroxylase
translation: MGVIIVGGGMVGSTLALAVAFLTRGQIPIRLIEAFVPDQNASFSDDKRAIALAHGTCQQLERLGIWKPLSHDATPITNIHVSDQGQCGFVHLRAQDHHIPFLGQVLSLKTAQNRLFSLLKSTPGIQLYCPAQVLQISRTQKMVRVTLNHGETLEAPLLIAADGSHSSLAQACHIQYQKKDYQQFAVTTHIRTEKALGSCAFERFTSEGPLALLPISQEESALVWCHSQANRFLVEAWNDADFLQQLQNTFGWRLGKILKVGPRYSTPLYLTFASRHISHRLALVGNSAQTLHPVSGQGFNLGLRDTMTLAQILAEAAAKGDDLGEYSVLNQYQRQRQKDQQNMITLTEGLVHLFSNALKPLVVARHLGLMTMEEGPFFAQLLSRSTLGWSHPRD
SIO_010081: HDEF_RS00285
subclass of: SO_0000673
so part of: HDEF_RS00285
location: complement(23655..24839)
location: region:23655-24839:-1
so has part: feature:23655-24839:-1:exon

WP_012737768.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23655-24839:-1:exon

HDEF_RS00290
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: pepP
locus tag: HDEF_RS00290
old locus tag: HDEF_0028
so part of: sequence
location: complement(24839..26158)
location: region:24839-26158:-1
so has part: feature:24839-26158:-1:exon
subclass of: SO_0000010

66259972
type: Gene
SIO_000068: ncbigene

position:26158:-1
position: 26158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24839-26158:-1:exon

HDEF_RS00290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: pepP
locus tag: HDEF_RS00290
old locus tag: HDEF_0028
EC number: 3.4.11.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857462.1
GO function: GO:0070006 - metalloaminopeptidase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Xaa-Pro aminopeptidase
translation: MITLKEYQKRRQKLLAKMLPNSVALIFSAPQVFRSTDSEYLYRQNSYFNYLSGFKEPEALLVLIKETQKKTKSILLNRARDPLAETWSGARLGQEWAPQKLGIDHALPFDEIEEHLYLFLKNQEVVYHAQGQYAYADEIFFSACKKLRLKSRQSSSVPHVLMDWRPCLDEMRLLKSKEEINVLRKACEISAQAHIRAMKKCRPGLYEYHLESEIQYELSQRGARFPAYNSIVATGENACILHYTENESKLNAGNLVLIDAGCEYQGYAGDITRTFPVSGQFTAPQKALYDIVLAAQNKALELYKPGISIHEVTQEVTRIITAGLINLGILKGSLKKLHSQKAYKPFFMHGLSHWLGMDVHDVGDYGSDEKNRPLKEGMVLTVEPGLYIFSDAKVPEQYRGIGIRIEDDILITKTGNENLTAAVPKDPELIESLMSSQEA
SIO_010081: HDEF_RS00290
subclass of: SO_0000673
so part of: HDEF_RS00290
location: complement(24839..26158)
location: region:24839-26158:-1
so has part: feature:24839-26158:-1:exon

WP_171770456.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24839-26158:-1:exon

HDEF_RS12360
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS12360
pseudo: true
so part of: sequence
location: complement(<26186..>26274)
location: region:26186-26274:-1
so has part: feature:26186-26274:-1:exon
subclass of: SO_0000010

66262047
type: Gene
SIO_000068: ncbigene

position:26186:-1
position: 26186
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:26274:-1
position: 26274
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26186-26274:-1:exon

HDEF_RS12360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS12360
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013183171.1
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS6 family transposase
SIO_010081: HDEF_RS12360
subclass of: SO_0000673
so part of: HDEF_RS12360
location: complement(<26186..>26274)
location: region:26186-26274:-1
so has part: feature:26186-26274:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:26186-26274:-1:exon

HDEF_RS00295
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS00295
old locus tag: HDEF_0029
so part of: sequence
location: 26421..28352
location: region:26421-28352:1
so has part: feature:26421-28352:1:exon
subclass of: SO_0000010

66259973
type: Gene
SIO_000068: ncbigene

position:26421:1
position: 26421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28352:1
position: 28352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26421-28352:1:exon

HDEF_RS00295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS00295
old locus tag: HDEF_0029
EC number: 3.1.13.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005169906.1
GO function: GO:0008859 - exoribonuclease II activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO process: GO:0006401 - RNA catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: exoribonuclease II
translation: MFQNNPLLAKLKKQLHVSAPKIEGIVKGTEKGFGFLEIDAQKSYFIPPPQMKKVMHGDRVQGSLYNDRDREMVQPETLLEPFLSRFVGRVQKRGTFLLIRPDHPLLKEAIPCYVSADIAHSFEEGDWAVAEMREHPLKGARAFKAEITSFIAHGEDNFAPWWVTLTRHNLERTPPDMCPLALNETESEREDLTDLNFITIDNASTEDMDDALCVSDLGNGSFMLMVAIADPTAYIDENSPLDTAARQRAFTTYLPGFDIPMLPREVADDICSLRPDQRRPALICRVTITPEGALGEDIRFSSAWITSKAKLAYNKVSDWLENQGDWAPPNTEIAEQIQWLKHIYDVRHHWRQQHALVFKNRSEYRFVINENGNVLDVIIDERRIAHGIVEECMIAANICAAVILRDCLGFGFYNVHRGFDPALVKQAAQILKTHGIEFPPADLLTLEGFCQLRRQLDSLGNEALESRLRRLQAFSELSVEPGPHFGLGLPLYASWTSPIRKYSDMVNHRLLKMVIANRSAKKLDENISELIAERRRANRMAERDISDWLYARYLNPIAGTDKNFSAKIMEMTRGGLRVRLLENGAIAFIPASLIHSVRSEIVFNSEMGTVYKNEDIIYRQGDMIEVQLAQVRLDTRNLIARPI
SIO_010081: HDEF_RS00295
subclass of: SO_0000673
so part of: HDEF_RS00295
location: 26421..28352
location: region:26421-28352:1
so has part: feature:26421-28352:1:exon

WP_012737769.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26421-28352:1:exon

HDEF_RS00300
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: ribD
locus tag: HDEF_RS00300
old locus tag: HDEF_0030
so part of: sequence
location: complement(28359..29537)
location: region:28359-29537:-1
so has part: feature:28359-29537:-1:exon
subclass of: SO_0000010

66259974
type: Gene
SIO_000068: ncbigene

position:28359:-1
position: 28359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29537:-1
position: 29537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28359-29537:-1:exon

HDEF_RS00300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: ribD
locus tag: HDEF_RS00300
old locus tag: HDEF_0030
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857463.1
GO function: GO:0008703 - 5-amino-6-(5-phosphoribosylamino)uracil reductase activity [Evidence IEA]; GO:0008835 - diaminohydroxyphosphoribosylaminopyrimidine deaminase activity [Evidence IEA]; GO:0050661 - NADP binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
translation: MKKTHSADSVKCQDEFYMSYALRLASLGRFTTTPNPNVGCVLVRHGQVVGEGYHLRLGEPHAEIHALQKAGRLAKGSVAYITLEPCCHYGKTPPCVEALIKAGVRRVVVAIEDPNPEIAGRGLYQLKQAGIEVTSGILSTEAQDLNPGFLKRMRTGLPYIQLKMACSLDGRTAMASGESQWITSEQSRQDVQFFRAQSSAILSTGVTVSADNPALTVRWESLPKKTQALYPQESLRQPVRIILDRHHKVTPQHQVVQQPGTCWLIRTKTDHQDWPNQVEQWIFSSIQWPDKKNAIDLGSLMTALAKREMNLIWVEAGAELAGGLLEAGLVDELILYMAPKLLGNTARGLCQLPGLNELAKAPEFVLQEVKQMGPDLRLRLKPDPGFSISMGK
SIO_010081: HDEF_RS00300
subclass of: SO_0000673
so part of: HDEF_RS00300
location: complement(28359..29537)
location: region:28359-29537:-1
so has part: feature:28359-29537:-1:exon

WP_012737770.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28359-29537:-1:exon

HDEF_RS00305
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: nrdR
locus tag: HDEF_RS00305
old locus tag: HDEF_0031
so part of: sequence
location: complement(29550..30023)
location: region:29550-30023:-1
so has part: feature:29550-30023:-1:exon
subclass of: SO_0000010

66259975
type: Gene
SIO_000068: ncbigene

position:29550:-1
position: 29550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30023:-1
position: 30023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29550-30023:-1:exon

HDEF_RS00305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: nrdR
locus tag: HDEF_RS00305
old locus tag: HDEF_0031
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012737771.1
GO function: GO:0140110 - transcription regulator activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcriptional regulator NrdR
translation: MHCPFCNTVDTKVIDSRLVSEGSQIKRRRQCAICHERFTTLEHAELVMPRVIKNDDLLEPFNEQKLRSGMRKALEKRPVSTDALETAIHQIKSQLRATGEPEVPSKMLGQFVMEALKKLDKIAYIRFASVYRSFEDVREFGEEIAKLQDNPSLHQKD
SIO_010081: HDEF_RS00305
subclass of: SO_0000673
so part of: HDEF_RS00305
location: complement(29550..30023)
location: region:29550-30023:-1
so has part: feature:29550-30023:-1:exon

WP_012737771.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29550-30023:-1:exon

HDEF_RS00310
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: recD
locus tag: HDEF_RS00310
old locus tag: HDEF_0032
so part of: sequence
location: complement(30054..31940)
location: region:30054-31940:-1
so has part: feature:30054-31940:-1:exon
subclass of: SO_0000010

66259976
type: Gene
SIO_000068: ncbigene

position:30054:-1
position: 30054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31940:-1
position: 31940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30054-31940:-1:exon

HDEF_RS00310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: recD
locus tag: HDEF_RS00310
old locus tag: HDEF_0032
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006704818.1
GO component: GO:0009338 - exodeoxyribonuclease V complex [Evidence IEA]
GO function: GO:0008854 - exodeoxyribonuclease V activity [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]; GO:0006302 - double-strand break repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: exodeoxyribonuclease V subunit alpha
translation: MMGLLNQALDQKLLRFLDVQFAQIIAAHHSPLLQLACALLSSDAGAGHVCLPLARLAPEYFFDGRHPELAEALWQAAGKPNKNAWLNAFQSSSLVGEGTSPTPLVLEKERLYLQRMWKNEGQVIQFISDYSLEKMTYHKKDECRLKQILDQLFTSNESDINFQKVAAAVAITSKVAIISGGPGTGKTTTVAKLLTALIRLAGERTLRIELAAPTGKAAVRLTQSLGNAYRELSLSAGESRRLPEKACTLHRLLGAYSKGHQSRYHKNNPLDLDVLVVDEASMVDLPMLARLIDALPNSAQVIFLGDRDQLASVEAGSVLGEIGRFLSLGYSTSRAEELNRLTGYDLKGHPIEHFPNLCVAHVCDQLCLLNKNYRFDKKSGIGELAQAVNSGEHHKAHSILRDVNKKYVDIRQHALSDAKDYQKLLKDCVAAYQPYLELIKQGKDPETILHAFNRYQLLCALRTGSFGLEGLNTQIEKTLCHSGLLSLSQKPFNNSWYSGRPIMIECNDSSLGLFNGDLGMTLYDHSGALRVYFQFSDGHIKSVQPNRLPAHSTAYAMTVHKSQGSEFEHTALVLPDHFTPIVTRELVYTAITRARQKLTLYSTDKVLNHAILTPTQRRSGLVARLKSF
SIO_010081: HDEF_RS00310
subclass of: SO_0000673
so part of: HDEF_RS00310
location: complement(30054..31940)
location: region:30054-31940:-1
so has part: feature:30054-31940:-1:exon

WP_012737772.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30054-31940:-1:exon

HDEF_RS00315
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: recB
locus tag: HDEF_RS00315
old locus tag: HDEF_0033
so part of: sequence
location: complement(31943..35569)
location: region:31943-35569:-1
so has part: feature:31943-35569:-1:exon
subclass of: SO_0000010

66259977
type: Gene
SIO_000068: ncbigene

position:31943:-1
position: 31943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35569:-1
position: 35569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31943-35569:-1:exon

HDEF_RS00315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: recB
locus tag: HDEF_RS00315
old locus tag: HDEF_0033
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012737773.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003678 - DNA helicase activity [Evidence IEA]; GO:0008854 - exodeoxyribonuclease V activity [Evidence IEA]
GO process: GO:0006281 - DNA repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: exodeoxyribonuclease V subunit beta
translation: MEFSMKKIQSLDPMILPLFGERLIEASAGTGKTFTIGILYLRLLLGLGGHHAYIRRLTVEEILVVTFTQSATEELRGRIRSEIYNLRMACLNEGTQNAFYQKLLAEITDLNAAASILLFAERNMDQAAIYTIHGFCQKTLLNNAFESGVLFKQTFIQNEDKLIRQTCADFWRRSCYLLSFEEAVAISQEWASPQALLKEISPYLEGEAPQLRNPPSEDESIQSRHQKIIKQITELKLKWQTTVPDLKTLIDKSGVDKRTYNSRYLPIWLEKITQWAYQESGSYFLPKELNRFRQSILFEKTQKGHPPQHPLFSLIDFIFFQGLTLRDVVLTKAIKEIRLSLEKEKRRRGELSFDDLLKNLDTALKQKGGNLLSETIRKQYPIVIIDEFQDTDPQQYRIFHSIYAKKKDCGLLLIGDPKQAIYAFRGADIFTYIRARSQIAHQYTLETNWRSSPAIVKAVNQLFTQIETPFLFSQIPFVEAIASDKNRTYQLTIDKKIQPALHFWLQKGEGITVNQYKKCMSNQCAIEIRDWLTAGQQGRAQLMSDQGVRSVKAADIAVLVRTRTEAALVKKALNRLSIPSVYMSNRDSVFDTPEAKDLLWILQAVLAPEIEKFLRCAMATSLLGLNTNALQALQSDGQAWDALVDEFHDYRQHWQKKGVLPMLRKLIFQRRLAENLLKTQEGERRLTDLLHLSELLQQISEELDSEQALVRWLAQKITEFNAESEDQKLRLETDCDLIQIVTVHQSKGLQYSLVWLPFIGYFQHQPHDERAQKEVFYHEPEHCTAVLDFKATHENRALAEKERLSEDLRLLYVALTRSVYHCSIGIAPFIKGGRKKQRESDIHLSALGYLIQKGMAGDAQYLSEKLKELEGEHIAVSLANPSDFSLWQPTKEPLPELTARHFTRKMQDHWQVTSYSKLQDSSSLTHSTVNRLKTDHILMQELLPSLDTEVITDVMNDPLFSSENSLSPHTFPRGAIPGTFLHDLLERLDFSQSIEIEWLKMQLLQKGFDEKWLPMLHDWLTEILDTPLNDKRDLSLSKLTEKNKQVELQFHLPIDAMLESSNLDVLIKKHDPLSALCSTLSFPKVQGILTGFIDLVFFWQDQFYLLDYKSNWLGTSAKAYHRQSIEQAMAEHRYDLQYQLYTLALHRYLRHRIPNYQYERDFGGVIYLFLRGVDSQTLGQGIFHCCPSFQLIEGLDQLFKGEKGGATE
SIO_010081: HDEF_RS00315
subclass of: SO_0000673
so part of: HDEF_RS00315
location: complement(31943..35569)
location: region:31943-35569:-1
so has part: feature:31943-35569:-1:exon

WP_012737773.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31943-35569:-1:exon

HDEF_RS00320
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: recC
locus tag: HDEF_RS00320
old locus tag: HDEF_0034
so part of: sequence
location: complement(35535..38906)
location: region:35535-38906:-1
so has part: feature:35535-38906:-1:exon
subclass of: SO_0000010

66259978
type: Gene
SIO_000068: ncbigene

position:35535:-1
position: 35535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38906:-1
position: 38906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35535-38906:-1:exon

HDEF_RS00320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: recC
locus tag: HDEF_RS00320
old locus tag: HDEF_0034
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012737774.1
GO component: GO:0009338 - exodeoxyribonuclease V complex [Evidence IEA]
GO function: GO:0008854 - exodeoxyribonuclease V activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: exodeoxyribonuclease V subunit gamma
translation: MFITYHSNQLDLLKTLTSTLIEKEPLKNPFQKEIILVQSPGMAQWLQIQLAQSLGISANIQFPLPATFIWDMFTKVLKNIPKESPFNKDAMTWKLMCLLPDLLQNPIFASIKHYLQDDEDKQKIHQLAIRIADLFDQYLVYRSEWLDGWENGKKFDDLNKNQDWQAALWVSLIRYSRQLEQPEWHRARLYQRFIQALNKNDVDSDLLPKRVFIFGISTLPPIYLKGLEALSRHMDIHFMFNNPCRYFWGDIQNYDILAKLNIKNTSSDLRNIEEEQINPLLASWGRLGRDHLYLLSQIEGLQEIHAFVDIEPDNLLHALQHDMLEFKNQATRHFSESNSHHNKKRLLDINDRSIGVHSCHSQQREVEILQDQLLNLFSEDPALTPRDVIVMVADIDNYAPYIQAVFSNASLERYLPFAISDRKMTQVHPVLQTFIKLLDLPQSRFSSEQVLGLLEISALSQKFEIQEKELSLLREWVEGSGIRWGLDNENVQDLSLPITGQHTWQFGLKRMFLGYAMDSQAGDWEGVLPYDESTGLAAELIGKLARLLMMLSIWRKKLKTSRLLSEWLPLCRDLFYAFFESNAETESIFILIDQQWQNIIQYGLSAQYANTVPVSLIRHDLVTRFENQRISQRFLAGPINFCTLMPMRSIPFKVVCLLGMNEGIYPRILPPLGFDLMAKKRQKGDRSRRDDDRYLFLEALLSAQQYLYISYIGRSIQDNSQRYPSVLVSELLEYIGNSYVLPGDENRNSDESMARVIQHLLFCHTRMPFSAKNFIKGTEQQSYAIEWLEAAKKHTQEQKQPQDDFIKPLVSEPFSEITLDELINFYRHPIKAFFQLRLGVQFRVEQKELSNEEPFILAPLARYQFNTELLNALIEQKNVDQLYARMQASGRLPFGHFGEIYWQQQKNEMGLIAKKIQTETGHTEFCRLEVNTTLGERTLSGWIAHAQTDGLIRWRPSTLTIVDGLLLWIEHLAYCLSGGKGESRIYGKKESVWRFSALSQSEAEQHLSLFIEGYQKGMIQPLLLLNHSGWAWLTKCYDLKNRHILWDEKTQAKAKDHLLTVFQGNPKTGVRGEGDDPYIQRLFRSINDTHVDRILQEAKNYLLPIAHHNIIKNGVFNEKNSIT
SIO_010081: HDEF_RS00320
subclass of: SO_0000673
so part of: HDEF_RS00320
location: complement(35535..38906)
location: region:35535-38906:-1
so has part: feature:35535-38906:-1:exon

WP_012737774.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35535-38906:-1:exon

HDEF_RS00325
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS00325
old locus tag: HDEF_0035
so part of: sequence
location: complement(38965..39333)
location: region:38965-39333:-1
so has part: feature:38965-39333:-1:exon
subclass of: SO_0000010

66259979
type: Gene
SIO_000068: ncbigene

position:38965:-1
position: 38965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39333:-1
position: 39333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38965-39333:-1:exon

HDEF_RS00325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS00325
old locus tag: HDEF_0035
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016856775.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: prepilin-type N-terminal cleavage/methylation domain-containing protein
translation: MKKNKKLQFNLLTSQKGFSVFEALIAALLFSISALGLLEYQQKLLQGFQRQWQMRQASALIQQNIEIFSETHHPVFSKLTNPTSGWKLEKIPRRVNANCINFHVEATSPQNQKFSLNRWFCE
SIO_010081: HDEF_RS00325
subclass of: SO_0000673
so part of: HDEF_RS00325
location: complement(38965..39333)
location: region:38965-39333:-1
so has part: feature:38965-39333:-1:exon

WP_012737775.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38965-39333:-1:exon

HDEF_RS00330
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS00330
old locus tag: HDEF_0036
so part of: sequence
location: complement(39375..39812)
location: region:39375-39812:-1
so has part: feature:39375-39812:-1:exon
subclass of: SO_0000010

66259980
type: Gene
SIO_000068: ncbigene

position:39375:-1
position: 39375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39812:-1
position: 39812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39375-39812:-1:exon

HDEF_RS00330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS00330
old locus tag: HDEF_0036
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016856776.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YgdB family protein
translation: MLIIFTMGLLLLTALQRELEGAFNISGQERFYLKAYNQAASSLSWGVSKQWPLRSLSQRTSRRHQGWYCETEQINQLKSCIKPMLEIGIFLIKGESILGNRSEKIILYQSAQTNEMPNTTEQKLVPVTGGWLDFCPVKNEKFCLD
SIO_010081: HDEF_RS00330
subclass of: SO_0000673
so part of: HDEF_RS00330
location: complement(39375..39812)
location: region:39375-39812:-1
so has part: feature:39375-39812:-1:exon

WP_234809412.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39375-39812:-1:exon

HDEF_RS00335
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS00335
old locus tag: HDEF_0037
so part of: sequence
location: complement(39851..40447)
location: region:39851-40447:-1
so has part: feature:39851-40447:-1:exon
subclass of: SO_0000010

66259981
type: Gene
SIO_000068: ncbigene

position:39851:-1
position: 39851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:40447:-1
position: 40447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39851-40447:-1:exon

HDEF_RS00335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS00335
old locus tag: HDEF_0037
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016856777.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: prepilin peptidase-dependent protein
translation: MPLNEKQTSKKGFTLIELLLALSFGSFIILSSAKIYPHFRYQTKFLQESFRLDQAMRQLMFSIEKDLRRAGFCNGQCPGMILRIGQYPGEMKNSCIILSYDLNKNGKLEGEQHRESEYFGYRLRKGVLEIQRGQLHCSGHGWEKISDPQEIKITHFSITQLPKSRLGTLFKTDFFANNHTKKPPIQRQINSVINNKNL
SIO_010081: HDEF_RS00335
subclass of: SO_0000673
so part of: HDEF_RS00335
location: complement(39851..40447)
location: region:39851-40447:-1
so has part: feature:39851-40447:-1:exon

WP_234813543.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39851-40447:-1:exon

HDEF_RS00340
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS00340
old locus tag: HDEF_0038
so part of: sequence
location: complement(40459..41025)
location: region:40459-41025:-1
so has part: feature:40459-41025:-1:exon
subclass of: SO_0000010

66259982
type: Gene
SIO_000068: ncbigene

position:40459:-1
position: 40459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41025:-1
position: 41025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40459-41025:-1:exon

HDEF_RS00340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS00340
old locus tag: HDEF_0038
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016856778.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: prepilin peptidase-dependent protein
translation: MHQIQNLLIHAGNQIPGQYTGFMKPFIIKKQKGISLVELLFAIFLISIITNWSVRSWYSHQQKERLLITARSLLIFLNQLQANAYWYNRTDFLWVYYHSGTWCIGSGNMELNACEKSKNSIYKPDYKDISLSHFPLKNMAFYGRRNTAQPGHFTLTNSEGCIRLIISKQGRIRLCSQNKKIADLPLCR
SIO_010081: HDEF_RS00340
subclass of: SO_0000673
so part of: HDEF_RS00340
location: complement(40459..41025)
location: region:40459-41025:-1
so has part: feature:40459-41025:-1:exon

WP_100102842.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:40459-41025:-1:exon

HDEF_RS00345
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: gnd
locus tag: HDEF_RS00345
old locus tag: HDEF_0040
so part of: sequence
location: complement(41121..42533)
location: region:41121-42533:-1
so has part: feature:41121-42533:-1:exon
subclass of: SO_0000010

66259983
type: Gene
SIO_000068: ncbigene

position:41121:-1
position: 41121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42533:-1
position: 42533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41121-42533:-1:exon

HDEF_RS00345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: gnd
locus tag: HDEF_RS00345
old locus tag: HDEF_0040
EC number: 1.1.1.44
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016856779.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004616 - phosphogluconate dehydrogenase (decarboxylating) activity [Evidence IEA]
GO process: GO:0006098 - pentose-phosphate shunt [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase
translation: MRKQQIGVIGMAVMGRNLALNIENQGYSVSIFNRSHEKTDQVIEENPEKNLLPCYSLKELAESLATPRRILLMVQSGSATDDTIRALTPYLNQGDTLIDGGNSHYQDTIRRSEELLKQGFYFMGVGVSGGEEGALKGPSIMPGGQKEAYELMAPMFKKIAAKAEGEPCVKYIGPNGAGHYVKMVHNGIEYGDMQLIAEAYSLLKQGLNLKNFELSDIFKQWNQGELSSYLIEITADIFCKKDEHGHDLIDFILDEAANKGTGKWTSQSALDLGIPLSLITESVFARYLSSLKTQRIAAAKVLTGPKIQPFHGQKAEFIEKIRSALYLGKIVSYAQGFQQLQTASEKNDWNLNYGDIASIFRAGCIIRARFLQKITEAYHQKPNISNLLLAEYFKKIADHYQQALRDIVSYAVQNGIPVPAFSAAITYYDSYRSALLPANLIQAQRDYFGAHTYKRNDSGQAVFHTNWVTD
SIO_010081: HDEF_RS00345
subclass of: SO_0000673
so part of: HDEF_RS00345
location: complement(41121..42533)
location: region:41121-42533:-1
so has part: feature:41121-42533:-1:exon

WP_012737780.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41121-42533:-1:exon

HDEF_RS00350
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: galU
locus tag: HDEF_RS00350
old locus tag: HDEF_0041
so part of: sequence
location: complement(42595..43488)
location: region:42595-43488:-1
so has part: feature:42595-43488:-1:exon
subclass of: SO_0000010

66259984
type: Gene
SIO_000068: ncbigene

position:42595:-1
position: 42595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43488:-1
position: 43488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42595-43488:-1:exon

HDEF_RS00350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: galU
locus tag: HDEF_RS00350
old locus tag: HDEF_0041
EC number: 2.7.7.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016856780.1
GO function: GO:0003983 - UTP:glucose-1-phosphate uridylyltransferase activity [Evidence IEA]
GO process: GO:0009225 - nucleotide-sugar metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UTP--glucose-1-phosphate uridylyltransferase GalU
translation: MPQKLKAIIPVAGLGTRMLPATKAIPKEMLPVVDKPIIQYIVNESVLAGVKEIVLVTHSSKNAIENHFDTSFELEAVLEARVKRQLLQEVQNICPSDVTIMHIRQGQAKGLGHAILCARPIIGDAPFVILLPDVLLETPSVDCLKENLTCMMERFAETARSQIMVAPIPLEDVCKYGIADCGNVIVFPGQAALIKAMIEKPSPKDTPSHLAVVGRYVLSSDIWPLLEKTSPGAGGEIQLTDAIDMLIETQPVEAFHMTGKWHDCGDKLGYMKAFVEYALRHETEGSAFLNWLKNQNF
SIO_010081: HDEF_RS00350
subclass of: SO_0000673
so part of: HDEF_RS00350
location: complement(42595..43488)
location: region:42595-43488:-1
so has part: feature:42595-43488:-1:exon

WP_012737781.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42595-43488:-1:exon

HDEF_RS00355
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: asmA
locus tag: HDEF_RS00355
old locus tag: HDEF_0042
so part of: sequence
location: complement(43724..45553)
location: region:43724-45553:-1
so has part: feature:43724-45553:-1:exon
subclass of: SO_0000010

66259985
type: Gene
SIO_000068: ncbigene

position:43724:-1
position: 43724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45553:-1
position: 45553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43724-45553:-1:exon

HDEF_RS00355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: asmA
locus tag: HDEF_RS00355
old locus tag: HDEF_0042
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016856781.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: outer membrane assembly protein AsmA
translation: MKKLMTVFIIVLVLLAGGMTALVVLLNPNDFRGYLAQQIEKRSGYQLALEGDLRWHVWPQLSVIAGQMSLTAPGAKKSIISAQNMRLDVELWPLLSHQLKVKQVSLKGARINLIPESQPKTPKNLPTVSKEEVDSDHASTSNWKLGIDKVQLMDSLLIWQKEDEAQINVRNVNLDLVQNENKQVKISLLSQINRDQRDLTVSLKAAVDLHQYPQKWDADIQQLSYQLQGADLPVNGIKGTMTLQAQYDKPSEKLTFNQLNFSANNNHFIGNAEAILSSIPTYLIRLRAQNINLDEILGWTPLKKDNTKNQSTSAVTVPTPVIATTTDNNEDLSQNLQVLRDFNTDFLLNIDQISYQGIKVKNIKLALKNHQGRLSLNPLSGELFEGNFLLNATADLTKKKMQMTLNPTLKNIDLKSLLQGLSLSPLISGKASLKGIFSGHGLNLQAFMTQWKGDAKIVMQPVQFNGVNIQQLIEQTVAKNMHVANVEKIYKPYTDIQKLESDLKLNAGKLEINHLKADSHFVSIKGKGIFNLPEQQSNMNLNVRLLQGFKGQADWIKTLQDIDVPLHIYGPWAHLQYRIDVQSLLNKNLKGQFQKKLNHWFKERLNESR
SIO_010081: HDEF_RS00355
subclass of: SO_0000673
so part of: HDEF_RS00355
location: complement(43724..45553)
location: region:43724-45553:-1
so has part: feature:43724-45553:-1:exon

WP_012737782.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:43724-45553:-1:exon

HDEF_RS00360
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: dcd
locus tag: HDEF_RS00360
old locus tag: HDEF_0043
so part of: sequence
location: complement(45635..46216)
location: region:45635-46216:-1
so has part: feature:45635-46216:-1:exon
subclass of: SO_0000010

66259986
type: Gene
SIO_000068: ncbigene

position:45635:-1
position: 45635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46216:-1
position: 46216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45635-46216:-1:exon

HDEF_RS00360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: dcd
locus tag: HDEF_RS00360
old locus tag: HDEF_0043
EC number: 3.5.4.13
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004942378.1
GO function: GO:0008829 - dCTP deaminase activity [Evidence IEA]
GO process: GO:0009394 - 2'-deoxyribonucleotide metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dCTP deaminase
translation: MRLCDHDIERWLDEKKLTITPRPPAKHINGATVDIRLGHEFRVFVGHKAPFIDLSAPKEEINHALDQIMSDKIVLKEKECFFLHPGELALAVTLESVTIPDDLVGWLDGRSSLARLGLMVHVTAHRIDPGWRGQIVLEFYNSGKLPLGLRPGMLIGALSFELLSGQAKRPYHQRQDAKYHNQKGAVASRIDKD
SIO_010081: HDEF_RS00360
subclass of: SO_0000673
so part of: HDEF_RS00360
location: complement(45635..46216)
location: region:45635-46216:-1
so has part: feature:45635-46216:-1:exon

WP_012737783.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45635-46216:-1:exon

HDEF_RS00365
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: lnt
locus tag: HDEF_RS00365
old locus tag: HDEF_0044
so part of: sequence
location: complement(46213..47802)
location: region:46213-47802:-1
so has part: feature:46213-47802:-1:exon
subclass of: SO_0000010

66259987
type: Gene
SIO_000068: ncbigene

position:46213:-1
position: 46213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:47802:-1
position: 47802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46213-47802:-1:exon

HDEF_RS00365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: lnt
locus tag: HDEF_RS00365
old locus tag: HDEF_0044
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012737784.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0016410 - N-acyltransferase activity [Evidence IEA]
GO process: GO:0042158 - lipoprotein biosynthetic process [Evidence IEA]; GO:0006497 - protein lipidation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: apolipoprotein N-acyltransferase
translation: MSQVRSFFSTTLLTSRWACVFFALLFGIAGTFSFSPFHFWPAAILSLFGLLSLTLNRSIKQSALIGFCWGLGLFGSGISWVYVSIFQFGGMSAPISLFIVLLLVAYLSLYVLLFSCLLGALCPQTTWWRLTLAAPVFWQITEYLRGSIFTGFPWLQFGYTQIQGPLQGIAPILGVEGITFILMIVTGLLAYAWHQRLKIALLLALAFLFLPWPLRYLDWFTPEPKKAVQVALVQGNIDQAIKMDIHSVNDILQIYKNETLPDIDKASIIIWPESAIPDIEKNQKTFLKEMDELLRNHHASLITGILGEQKSSAAPIHDLLFNKVIVIGEKKPYEYPAMNSYEKHHLVPFGEFIPLENMLHRLIPFFNRPMSSFSSGRYEQAPLNVKGLNVITAICYEIILGQQIRDNFQPNADFLLTISNDAWFGHSIGPWQHFQMARMRALELGRPLLRVTNTGVTALIGPRGNVLAQLPQFTRQVLKATLIPTSGITPYARFGIWPLWSMALIMGGIALYCSLHTSFGLNKKGKREQ
SIO_010081: HDEF_RS00365
subclass of: SO_0000673
so part of: HDEF_RS00365
location: complement(46213..47802)
location: region:46213-47802:-1
so has part: feature:46213-47802:-1:exon

WP_012737784.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:46213-47802:-1:exon

HDEF_RS00370
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: corC
locus tag: HDEF_RS00370
old locus tag: HDEF_0046
so part of: sequence
location: complement(47892..48773)
location: region:47892-48773:-1
so has part: feature:47892-48773:-1:exon
subclass of: SO_0000010

66259988
type: Gene
SIO_000068: ncbigene

position:47892:-1
position: 47892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48773:-1
position: 48773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47892-48773:-1:exon

HDEF_RS00370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: corC
locus tag: HDEF_RS00370
old locus tag: HDEF_0046
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012737786.1
GO function: GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]
note: CorC(YbeX) belongs to the Cyclin M Mg2+ Exporter (CNNM) family, and was characterized as belonging to a set of three proteins, at least one of which must be present for CorA to function; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CNNM family magnesium/cobalt transport protein CorC
translation: MSDDNLENDANSPSKKGFFTSFFSQLFHDEPKNKDDLVELIRDSEQNDLIDPDTRNMLEGVMDISEQRVRDIMIPRSQMVTLKRNQTLDQCLDVIIESAHSRFPVISEDKDHIEGILMAKDLLPFMLEDSQPFSIDLVLRNAVVVPESKPVDKMLKEFQLRRYHIAIVIDEFGSISGLVTIEDILELIVGEIEDEYDDTEDSDIRQLSQHTYTLRALTEIKDFNAVFGTHFNDDEVDTMGGLIMQAFGHLPSRGETIMIEGYLFKVVKADNRRIIQLNVKISDNVQKPNLAAL
SIO_010081: HDEF_RS00370
subclass of: SO_0000673
so part of: HDEF_RS00370
location: complement(47892..48773)
location: region:47892-48773:-1
so has part: feature:47892-48773:-1:exon

WP_012737786.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:47892-48773:-1:exon

HDEF_RS00375
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: ybeY
locus tag: HDEF_RS00375
old locus tag: HDEF_0047
so part of: sequence
location: complement(48846..49301)
location: region:48846-49301:-1
so has part: feature:48846-49301:-1:exon
subclass of: SO_0000010

66259989
type: Gene
SIO_000068: ncbigene

position:48846:-1
position: 48846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49301:-1
position: 49301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48846-49301:-1:exon

HDEF_RS00375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: ybeY
locus tag: HDEF_RS00375
old locus tag: HDEF_0047
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012737787.1
GO function: GO:0046872 - metal ion binding [Evidence IEA]; GO:0004540 - ribonuclease activity [Evidence IEA]
GO process: GO:0042254 - ribosome biogenesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: rRNA maturation RNase YbeY
translation: MNQIILDLQIACVDNQGLPNENDFQLWLSSAISPFKKNAEVTIRLVDEIESRQLNFQYRQIDKPTNVLSFPFISPVQVPLPLLGDLIICRQIVEKEAVLQKKALWAHWAHMVVHGALHLLGYDHILNDDAKKMESIETEIMMYLGYPNPYD
SIO_010081: HDEF_RS00375
subclass of: SO_0000673
so part of: HDEF_RS00375
location: complement(48846..49301)
location: region:48846-49301:-1
so has part: feature:48846-49301:-1:exon

WP_012737787.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48846-49301:-1:exon

HDEF_RS00380
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: rfaD
locus tag: HDEF_RS00380
old locus tag: HDEF_0048
so part of: sequence
location: 49531..50460
location: region:49531-50460:1
so has part: feature:49531-50460:1:exon
subclass of: SO_0000010

66259990
type: Gene
SIO_000068: ncbigene

position:49531:1
position: 49531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50460:1
position: 50460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49531-50460:1:exon

HDEF_RS00380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: rfaD
locus tag: HDEF_RS00380
old locus tag: HDEF_0048
EC number: 5.1.3.20
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012737788.1
GO function: GO:0008712 - ADP-glyceromanno-heptose 6-epimerase activity [Evidence IEA]
GO process: GO:0005975 - carbohydrate metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ADP-glyceromanno-heptose 6-epimerase
translation: MIIVTGGAGFIGSNIVRALNKIGYQDILVVDNLEKGAKFVNLVDLKIADYRDKDDFITSVRAKEVLGNIEAIFHLGACSSTMEWDGQFMMKNNYEYSKTLLHFCLKACIPFLYASSAAVYGGRTDCFIEEPQYEKPLNIYGYSKFLFDQYVRKIWPKARAPICGFRYFNVYGPRETHKGSMASVVFHLDKQIKAGKPPQLFLGSEQFKRDFIFVDDVAQINLWCWQNQISGIFNCGTGHAASFQTLADTVVAYHNSKPVQYVDFPENLKGCYQTFTQADITKLRTIGYDKPFKPLDEGVTHYLDWLNHQ
SIO_010081: HDEF_RS00380
subclass of: SO_0000673
so part of: HDEF_RS00380
location: 49531..50460
location: region:49531-50460:1
so has part: feature:49531-50460:1:exon

WP_012737788.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49531-50460:1:exon

HDEF_RS00385
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: pgi
locus tag: HDEF_RS00385
old locus tag: HDEF_0049
so part of: sequence
location: 50492..52138
location: region:50492-52138:1
so has part: feature:50492-52138:1:exon
subclass of: SO_0000010

66259991
type: Gene
SIO_000068: ncbigene

position:50492:1
position: 50492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52138:1
position: 52138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50492-52138:1:exon

HDEF_RS00385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: pgi
locus tag: HDEF_RS00385
old locus tag: HDEF_0049
EC number: 5.3.1.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012737789.1
GO function: GO:0004347 - glucose-6-phosphate isomerase activity [Evidence IEA]
GO process: GO:0006094 - gluconeogenesis [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glucose-6-phosphate isomerase
translation: MKKINPTQTSAWKALQQHFKEIEPIHIRHLFHADPKRSEKFSLTFNDLIRVDFSKNRLTAQTIEKLQALAQETDLALAICSMFSGGKINETEERPVLHIALRNRGNQPILVDGQDVMPLVNAVLEKMKRFCHQVIKGDWNGYSGQTITDVVNIGIGGSDLGPYMATEALKPYKNHLKMHFVSNVDGTDIVETLKALNPARTLFIVASKTFTTQETMTNAQTAREWFLKTAGDSAHVARHFVALSTNIKEVTNFGIDPENSFEFWDWVGGRYSLWSAIGLPIALSIGFDNFEKLLEGAYEMDQHFLKTDFTHNIPVILALIGIWYSHFFGAETEAVLPYDQYLHRFPAYLQQASMESNGKWVDRDGKPVGYQTGSILWGEPGTNGQHAFYQLIHQGTKIIPCDFIAPVISHNAIGDHHHKLLANFFAQTQALAFGKTEQEVQEELMAEGVFSEKATYLAPFKAFSGNRPTNSILLKQITPLSLGALIALYEHKIFTQGVILNIFSFDQWGVELGKKLASGILSELEGPEKVSCHDSSTNSLINCFKKWH
SIO_010081: HDEF_RS00385
subclass of: SO_0000673
so part of: HDEF_RS00385
location: 50492..52138
location: region:50492-52138:1
so has part: feature:50492-52138:1:exon

WP_012737789.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50492-52138:1:exon

HDEF_RS00390
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS00390
old locus tag: HDEF_0050
so part of: sequence
location: 52280..53521
location: region:52280-53521:1
so has part: feature:52280-53521:1:exon
subclass of: SO_0000010

66259992
type: Gene
SIO_000068: ncbigene

position:52280:1
position: 52280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53521:1
position: 53521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52280-53521:1:exon

HDEF_RS00390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS00390
old locus tag: HDEF_0050
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012737790.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MFS transporter
translation: MKNSFSVKTTLGSRSLLFPLSLVLFEFATYIANDMIQPGMLMVVADFKVGVEWVPTSMTAYLAGAVLFQLLIGPLSDRRGRRPVMLFGIGFFVVTCLAILWASNIEQFIAMRFLQGIGLCFIGAVGYATIQEAFEESMCVKIIALMANVALVAPLLGPLAGAALIHVAPWEVMFVFFAVLGTISFVGLWRAMPETATLKGEKLSFSVLKADYKNVFSNTRFLCGAFGLGFASLPLLTWIAQSPVILITSEKLSIFDYGLLQIPIFAALISGNITLASLTSKKKLPQLIQLGAGPMIIGLLLAAVSTLYSSHAYFWMVAGLSIYAFGLGLGNAALMRLTLFSSKVSKGAVSAVVGMINMLMFSIGIEFAQILYVRGGSGFFNVFNLLCGLSWFLLVWIFLRTKPVETQKDISSI
SIO_010081: HDEF_RS00390
subclass of: SO_0000673
so part of: HDEF_RS00390
location: 52280..53521
location: region:52280-53521:1
so has part: feature:52280-53521:1:exon

WP_012737790.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:52280-53521:1:exon

HDEF_RS00395
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS00395
old locus tag: HDEF_0051
so part of: sequence
location: 53568..54818
location: region:53568-54818:1
so has part: feature:53568-54818:1:exon
subclass of: SO_0000010

66259993
type: Gene
SIO_000068: ncbigene

position:53568:1
position: 53568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:54818:1
position: 54818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53568-54818:1:exon

HDEF_RS00395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS00395
old locus tag: HDEF_0051
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004718327.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MFS transporter
translation: MKNSLTLKITLDRRTLLFVISLVLFEFAVYIANDMIQAGMLMVVSDFKAGLEWVPTAMTFYLAGGILFELLIGPVSDRLGRRPVMLTGVVFFVITCLAILWATNIEQFMLMRFLQGIGMCFIGAVGYATIQEAFEEATCVKMIALMANVALIAPLLGPLIGVALIQVASWKMMFVFVAILGAFSFIGLWRTMPETAVLKGEKLSFAVVAFDYKTVFSNVRFLCGALALAFANLPLLSWIAQSPVILMSTEKLSTFEYGLLQIPIFGALIAGNITLASLSGKKKLPTLIRMAAAPIMAGLFIAFISTVYFFHAYLWMVAGLSLYAFGVDLCNAALMRLTLFSSDVSKGTVSAVITMIDMLIFFLGVELSKILYFWKGVGLLNFFNLICGFCWLISVWFFIRRMPTEKNMPISSEKSS
SIO_010081: HDEF_RS00395
subclass of: SO_0000673
so part of: HDEF_RS00395
location: 53568..54818
location: region:53568-54818:1
so has part: feature:53568-54818:1:exon

WP_012737791.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:53568-54818:1:exon

HDEF_RS00400
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: sodA
locus tag: HDEF_RS00400
old locus tag: HDEF_0052
so part of: sequence
location: 54815..55444
location: region:54815-55444:1
so has part: feature:54815-55444:1:exon
subclass of: SO_0000010

66259994
type: Gene
SIO_000068: ncbigene

position:54815:1
position: 54815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55444:1
position: 55444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54815-55444:1:exon

HDEF_RS00400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: sodA
locus tag: HDEF_RS00400
old locus tag: HDEF_0052
EC number: 1.15.1.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016856788.1
GO function: GO:0004784 - superoxide dismutase activity [Evidence IEA]
GO process: GO:0006801 - superoxide metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: superoxide dismutase [Mn]
translation: MSYSLPSLPYAYDALEPHFDAKTMEIHHTKHHQAYVTNANSVLSSYPELTKLSVESLIQDLNCVPSEKRVFMRNNAGGHANHGFFWTGLKIGTVLQGKLKIAIEKDFGSVDAFKTQFEQAAATRFGSGWAWLVLKNTGKLAVVSTANQDNPLMGDAVCGASGVPIMGLDVWEHAYYLKYQNRRPDYIKAFWQVVNWDEAEKRFMKVSKA
SIO_010081: HDEF_RS00400
subclass of: SO_0000673
so part of: HDEF_RS00400
location: 54815..55444
location: region:54815-55444:1
so has part: feature:54815-55444:1:exon

WP_012737792.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:54815-55444:1:exon

HDEF_RS00405
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: tpiA
locus tag: HDEF_RS00405
old locus tag: HDEF_0053
so part of: sequence
location: complement(55476..56243)
location: region:55476-56243:-1
so has part: feature:55476-56243:-1:exon
subclass of: SO_0000010

66259995
type: Gene
SIO_000068: ncbigene

position:55476:-1
position: 55476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:56243:-1
position: 56243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55476-56243:-1:exon

HDEF_RS00405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: tpiA
locus tag: HDEF_RS00405
old locus tag: HDEF_0053
EC number: 5.3.1.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016856789.1
GO function: GO:0004807 - triose-phosphate isomerase activity [Evidence IEA]
GO process: GO:0006096 - glycolytic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: triose-phosphate isomerase
translation: MRRSLIMGNWKLNGSLSMLAEFITSLSDQIDALKMCDIAIAPPAVYLHEAKKQLKNDRISLAAQNVDFNTGGAFTGELSPQMLKEVGAKYVIIGHSERRSYHQETNEGIAKKFALLKETGLIPVLCIGESETENAQGLTQTICAKQLDAILAKCGPDAFKNSVIAYEPIWAIGTGKAATASEAQKVHAFIRQHVSKGKDEIAKTVIIQYGGSVNASNADEFFAEKDIDGALVGGASLKVNDFLKIAQSAVAAKTF
SIO_010081: HDEF_RS00405
subclass of: SO_0000673
so part of: HDEF_RS00405
location: complement(55476..56243)
location: region:55476-56243:-1
so has part: feature:55476-56243:-1:exon

WP_012737793.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:55476-56243:-1:exon

HDEF_RS00410
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: fpr
locus tag: HDEF_RS00410
old locus tag: HDEF_0054
so part of: sequence
location: complement(56323..57069)
location: region:56323-57069:-1
so has part: feature:56323-57069:-1:exon
subclass of: SO_0000010

66259996
type: Gene
SIO_000068: ncbigene

position:56323:-1
position: 56323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57069:-1
position: 57069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56323-57069:-1:exon

HDEF_RS00410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: fpr
locus tag: HDEF_RS00410
old locus tag: HDEF_0054
EC number: 1.18.1.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002208956.1
GO function: GO:0004324 - ferredoxin-NADP+ reductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ferredoxin--NADP(+) reductase
translation: MSQWVNGKITDIKPWTDSLFSIQIEAPIDPFIAGQYTKLALEIDGTRVQRAYSYVNAPSDHRLEIYLVTVPGGKLSIPLHRLCIGEDIIVASKAQGFFILSEVPVCKTLWMLATGTGIGPYLSILQEGKDVERFERMILVHAVRFASDLSYLPLMKKLEKRYQGRLSIQTVVSREKTSHSLMGRIPELIEKGTLEASVNQKIEAQSSHVMLCGNPQMVKDTFKTLEEHRQMRKHFRKKPGHMSSEQYW
SIO_010081: HDEF_RS00410
subclass of: SO_0000673
so part of: HDEF_RS00410
location: complement(56323..57069)
location: region:56323-57069:-1
so has part: feature:56323-57069:-1:exon

WP_012737794.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:56323-57069:-1:exon

HDEF_RS00415
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS00415
old locus tag: HDEF_0055
so part of: sequence
location: 57102..57335
location: region:57102-57335:1
so has part: feature:57102-57335:1:exon
subclass of: SO_0000010

66259997
type: Gene
SIO_000068: ncbigene

position:57102:1
position: 57102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:57335:1
position: 57335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57102-57335:1:exon

HDEF_RS00415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS00415
old locus tag: HDEF_0055
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012737795.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SlyX family protein
translation: MKKGMTMTDALTQRLEILESRLAFQDAAIEDLNKAMVEYQIKIIQLQEHLRVLNEKLTSARLSHLAPLSEEDPPPHY
SIO_010081: HDEF_RS00415
subclass of: SO_0000673
so part of: HDEF_RS00415
location: 57102..57335
location: region:57102-57335:1
so has part: feature:57102-57335:1:exon

WP_012737795.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:57102-57335:1:exon

HDEF_RS00420
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: typA
locus tag: HDEF_RS00420
old locus tag: HDEF_0056
so part of: sequence
location: complement(57343..59166)
location: region:57343-59166:-1
so has part: feature:57343-59166:-1:exon
subclass of: SO_0000010

66259998
type: Gene
SIO_000068: ncbigene

position:57343:-1
position: 57343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:59166:-1
position: 59166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57343-59166:-1:exon

HDEF_RS00420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: typA
locus tag: HDEF_RS00420
old locus tag: HDEF_0056
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016856792.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribosome-dependent GTPase TypA
translation: MSSNKKNLRNIAIIAHVDHGKTTLVDKLLEQSGTFGERAETTERVMDSNDLEKERGITILAKNTAIKWNEYRINIVDTPGHADFGGEVERVLSMVDSVLLVVDAQDGPMPQTRFVTKKAFAHGLQPIVVINKIDRPGARPDWVVDQVFDLFVNLDATDEQLDFPVIYTSALLGTAGTDYNDMAKDMTPLYQAIIDHVPAPEVELDGPFQMQISQLDYNNYVGVIGIGRIKRGTVKPNQSIVIIDSQGKTRNAKVSKVFGHMGLERIEIPLAEAGDIIAITGLGDLNISDTLCDINHIESLPALSVDEPTVSMYFCVNTSPFCGKEGKYVTSRQILERLKKELIHNVALRVEETEDSDAFRVSGRGELHLSVLIENMRREGFELAVSRPKVINRKVDGQDQEPFENVTLDIEEQHQGSVMQAMGERKGDVKNMIPDGKGRIRLDYVIPSRGLIGFRTEFMTMTSGTGLLYSTFSHYDLVRSGDIGQRQNGVLISNGQGKAVAFALFSLQDRGKLFLGHGAEVYEGQIIGIHTRSNDLTVNCLTGKKLTNMRASGTDEATTLVPPVKMSLEQALEFIDDDELVEITPQSIRIRKRYLTENDRKRANRTK
SIO_010081: HDEF_RS00420
subclass of: SO_0000673
so part of: HDEF_RS00420
location: complement(57343..59166)
location: region:57343-59166:-1
so has part: feature:57343-59166:-1:exon

WP_012737796.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:57343-59166:-1:exon

HDEF_RS00425
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS00425
old locus tag: HDEF_0057
so part of: sequence
location: complement(59531..59845)
location: region:59531-59845:-1
so has part: feature:59531-59845:-1:exon
subclass of: SO_0000010

66259999
type: Gene
SIO_000068: ncbigene

position:59531:-1
position: 59531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:59845:-1
position: 59845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:59531-59845:-1:exon

HDEF_RS00425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS00425
old locus tag: HDEF_0057
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012737797.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: BolA/IbaG family iron-sulfur metabolism protein
translation: MIQDHIKQKLDEAFKPVYLDVINESHRHRAPAGSESHFKIVMVSHQFSGLKALERHRMVYNTLEEEFNHGGVHALALHLYTLKEWEEALQVEPISPPCVSRKDK
SIO_010081: HDEF_RS00425
subclass of: SO_0000673
so part of: HDEF_RS00425
location: complement(59531..59845)
location: region:59531-59845:-1
so has part: feature:59531-59845:-1:exon

WP_012737797.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:59531-59845:-1:exon

HDEF_RS00430
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: rdgC
locus tag: HDEF_RS00430
old locus tag: HDEF_0058
so part of: sequence
location: complement(59842..60750)
location: region:59842-60750:-1
so has part: feature:59842-60750:-1:exon
subclass of: SO_0000010

66260000
type: Gene
SIO_000068: ncbigene

position:59842:-1
position: 59842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:60750:-1
position: 60750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:59842-60750:-1:exon

HDEF_RS00430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: rdgC
locus tag: HDEF_RS00430
old locus tag: HDEF_0058
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012737798.1
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombination-associated protein RdgC
translation: MIWFKNLMMYQLQCPLEKDSSELEKKLANFAFIPCGPQEKVRVGWIPPMVSHKDTLSYQVNRQILLCAHKEEKMLPASVIKQELESQIEKLEAQQKRKLKKTEKASLKDHVFYDLLPRAFSRFQKTWIWIDTIHQMMILDASSTKRAEEALALLRQSLGSLAVVPFTFKHPVEFILTEWIRSDNLPSGFVLMEEAELKSTLTEGGTIRCKNQNLYSDEIALHIKSGKKVTRLALEWQESIQLILNQDLSLKRVKFLEVLREKNSHINKKEVAQCFDADFVLMTYELTELIKNMMSAFSRYPE
SIO_010081: HDEF_RS00430
subclass of: SO_0000673
so part of: HDEF_RS00430
location: complement(59842..60750)
location: region:59842-60750:-1
so has part: feature:59842-60750:-1:exon

WP_012737798.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:59842-60750:-1:exon

HDEF_RS00435
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: sufA
locus tag: HDEF_RS00435
old locus tag: HDEF_0059
so part of: sequence
location: 60938..61309
location: region:60938-61309:1
so has part: feature:60938-61309:1:exon
subclass of: SO_0000010

66260001
type: Gene
SIO_000068: ncbigene

position:60938:1
position: 60938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:61309:1
position: 61309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60938-61309:1:exon

HDEF_RS00435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: sufA
locus tag: HDEF_RS00435
old locus tag: HDEF_0059
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016856795.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Fe-S cluster assembly scaffold SufA
translation: MQQNKLDIFETAHHQWSGVTMTARAAAQIIKLMKKNEKIKGLKLSVKPSGCAGFAYVMNMVESTANDDLLFEQKEAKLYVPLKAMPFVDGTEMDYVSEGLNQMFKFNNPRAQHACGCGESFGV
SIO_010081: HDEF_RS00435
subclass of: SO_0000673
so part of: HDEF_RS00435
location: 60938..61309
location: region:60938-61309:1
so has part: feature:60938-61309:1:exon

WP_012737799.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:60938-61309:1:exon

HDEF_RS00440
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: sufB
locus tag: HDEF_RS00440
old locus tag: HDEF_0060
so part of: sequence
location: 61360..62862
location: region:61360-62862:1
so has part: feature:61360-62862:1:exon
subclass of: SO_0000010

66260002
type: Gene
SIO_000068: ncbigene

position:61360:1
position: 61360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:62862:1
position: 62862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61360-62862:1:exon

HDEF_RS00440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: sufB
locus tag: HDEF_RS00440
old locus tag: HDEF_0060
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016856796.1
GO process: GO:0016226 - iron-sulfur cluster assembly [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Fe-S cluster assembly protein SufB
translation: MNKKKIDTKEASPIWDNESRYKEGFFTQLKTDELEKGLNEDVVRAISAKRREPQWMLDFRLDAYDGWLKMSEPHWLKGDYDPLDYQDYSYYSAPSCPSCDDDQFHTYSSSSTDHPSHAGKNAYLNSEVESAFAQLGVPVREGAEVAVDAIFDSVSVATTYREKLAKQGIIFCSLGEAIQEYPQLVCQYLGSVVPAKDNFFAALNAAVASDGTFVYVPKGVRCPMELSTYFRINAAKTGQFERTIIIADEGSYVSYIEGCSAPVREASQLHAAVVEVILHKNAEVKYSTVQNWFAGSETTGGILNFVTKRALCKGAGSKMSWTQSETGSAITWKYPSVILQGDHSIGEFFSVALTNGKQQADTGTKMIHIGKNTKSTIISKGISAGHSQNTYRGLVKILPGAHNARNFTQCDSMLIGSDSAANTFPYVEVKNNSAQLEHEATTSRIGDDQLFYCLQRGISQDDAISMMVNGFCKDVFSELPLEFAVEAQKLLAINLEHSVG
SIO_010081: HDEF_RS00440
subclass of: SO_0000673
so part of: HDEF_RS00440
location: 61360..62862
location: region:61360-62862:1
so has part: feature:61360-62862:1:exon

WP_012737800.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:61360-62862:1:exon

HDEF_RS00445
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: sufC
locus tag: HDEF_RS00445
old locus tag: HDEF_0061
so part of: sequence
location: 62965..63705
location: region:62965-63705:1
so has part: feature:62965-63705:1:exon
subclass of: SO_0000010

66260003
type: Gene
SIO_000068: ncbigene

position:62965:1
position: 62965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:63705:1
position: 63705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62965-63705:1:exon

HDEF_RS00445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: sufC
locus tag: HDEF_RS00445
old locus tag: HDEF_0061
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012737801.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Fe-S cluster assembly ATPase SufC
translation: MLSINNLNVSVEETPILKGLDLTIKSGEVHAIMGPNGSGKSTLSSTLAGREEYQVTQGEVLFKGKNLLELDPSERAGEGVFLAFQYPVEIPGVSNRFFLQTAVNAVRKYRQQAPLDRFDFTDFIEEKMALLKMPADLLTRSVNVGFSGGEKKRNDILQMAALEPALCILDETDSGLDIDALKIVAQGVNSLRNEKRAFIIVTHYQRILEYIKPDFVHVLHEGRMIKSGDFTLVKELEERGYGWLTD
SIO_010081: HDEF_RS00445
subclass of: SO_0000673
so part of: HDEF_RS00445
location: 62965..63705
location: region:62965-63705:1
so has part: feature:62965-63705:1:exon

WP_012737801.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:62965-63705:1:exon

HDEF_RS00450
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: sufD
locus tag: HDEF_RS00450
old locus tag: HDEF_0062
so part of: sequence
location: 63686..64984
location: region:63686-64984:1
so has part: feature:63686-64984:1:exon
subclass of: SO_0000010

66260004
type: Gene
SIO_000068: ncbigene

position:63686:1
position: 63686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:64984:1
position: 64984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63686-64984:1:exon

HDEF_RS00450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: sufD
locus tag: HDEF_RS00450
old locus tag: HDEF_0062
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012737802.1
GO process: GO:0016226 - iron-sulfur cluster assembly [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Fe-S cluster assembly protein SufD
translation: MAGLPTRVKRELPEKPDVSKNPFSQLFEQKTTAPSHHKEAHWQALLKLGFPHAKHEDWRYTSLNRLLDHTFTLEKKSTVTPEKCGDLALFMVGQSHKLVFIDGHFIASLSEIDEIPYELLKRKQAVPAPVKPEFFLHLTESLSVENLVIRLAAGQKSKKPLYLLHISSGQETSPLKMAHYRHHLLLEPGSEAEVVEHFVSLNTQRHFTGARLTASIGEEARLHHYKLAFENNQSDHFAHNDFVLASRASVHSAHFLLGAALTRHHTSVQLNGEGASASINSLLLPKEMELFDSRTHVEHNQIGCQSRQLHKTMVSKQGTAVFNGMIKVAPKAIQTDAHMINNNLLLNASAQVNTKPQLEIDADDVKCSHGATVGCIDNQQMFYLQSRGITHSQARKMILFAFASELTEGIKLDLVRESVLSRFSERLSEELS
SIO_010081: HDEF_RS00450
subclass of: SO_0000673
so part of: HDEF_RS00450
location: 63686..64984
location: region:63686-64984:1
so has part: feature:63686-64984:1:exon

WP_012737802.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:63686-64984:1:exon

HDEF_RS00455
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: sufS
locus tag: HDEF_RS00455
old locus tag: HDEF_0063
so part of: sequence
location: 64981..66240
location: region:64981-66240:1
so has part: feature:64981-66240:1:exon
subclass of: SO_0000010

66260005
type: Gene
SIO_000068: ncbigene

position:64981:1
position: 64981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:66240:1
position: 66240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64981-66240:1:exon

HDEF_RS00455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: sufS
locus tag: HDEF_RS00455
old locus tag: HDEF_0063
EC number: 2.8.1.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016856798.1
GO function: GO:0031071 - cysteine desulfurase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO process: GO:0006534 - cysteine metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cysteine desulfurase SufS
translation: MNFFESSLAISSCFSIQKVREDFPILAEKIHEKPLIYLDSASSAQKPQSVINSELTFYSKKYAAVHRGVHTLSAQATQDMEQVRVKVADFIQAQSPKEIVFVKGTTEAINLVANSYGRHFFHPGENIILTEMEHHANIVPWQMLARERGLNIKVWKLTHEGELDIDQLSELIDNKTRLLAITQVSNVLGTVNPIKKIVARAKESGLLVLVDGAQAVMHQSVNVQDLDCDFYAFSGHKLYGPSGIGILYAKKALLDVMPPWEGGGSMIEKVSLTEDTTFTKAPWRFEAGSPNTAGIVGLGAAIEYVTHLGLTDIAKYEKSLMKYSLAALSTCKTVKLYGSQKTRTGVIAFNLGKHHAYDVGCFLDQYGIAIRTGHHCAMPLMSFYQVPSMCRISLAMYNTLEEIDFFIEKLQHIENILSS
SIO_010081: HDEF_RS00455
subclass of: SO_0000673
so part of: HDEF_RS00455
location: 64981..66240
location: region:64981-66240:1
so has part: feature:64981-66240:1:exon

WP_012737803.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:64981-66240:1:exon

HDEF_RS00460
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: sufE
locus tag: HDEF_RS00460
old locus tag: HDEF_0064
so part of: sequence
location: 66276..66704
location: region:66276-66704:1
so has part: feature:66276-66704:1:exon
subclass of: SO_0000010

66260006
type: Gene
SIO_000068: ncbigene

position:66276:1
position: 66276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:66704:1
position: 66704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66276-66704:1:exon

HDEF_RS00460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: sufE
locus tag: HDEF_RS00460
old locus tag: HDEF_0064
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016856799.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cysteine desulfuration protein SufE
translation: MAIFPNQQKLMKNFSRCQNWEEKYLYMMELGAMLTPLTEEQRQPKNLIAGCQSQVWIVMKQDSEGKILFFGDSDAAIVKGLIAMVFILCQNLSLDEIIKLDAHSFFTDLALTQHLTPSRSEGLSAMVEAIRAKAALISTIIV
SIO_010081: HDEF_RS00460
subclass of: SO_0000673
so part of: HDEF_RS00460
location: 66276..66704
location: region:66276-66704:1
so has part: feature:66276-66704:1:exon

WP_012737804.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:66276-66704:1:exon

HDEF_RS00465
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: cyoE
locus tag: HDEF_RS00465
old locus tag: HDEF_0066
so part of: sequence
location: complement(66701..67573)
location: region:66701-67573:-1
so has part: feature:66701-67573:-1:exon
subclass of: SO_0000010

66260007
type: Gene
SIO_000068: ncbigene

position:66701:-1
position: 66701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:67573:-1
position: 67573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66701-67573:-1:exon

HDEF_RS00465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: cyoE
locus tag: HDEF_RS00465
old locus tag: HDEF_0066
EC number: 2.5.1.141
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006709500.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0008495 - protoheme IX farnesyltransferase activity [Evidence IEA]
GO process: GO:0048034 - heme O biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: heme o synthase
translation: MIKPYINITKPGIIFGNLISFIGGFFVAAKGAINWPLFLGSLFGVSCVIASGCVFNNYIDRDIDKIMERTKNRVLVKGLMSPEISLIYASVLGLSGLFLLYMTTNRLTVLLAAMGFVIYVFVYSLYMKRHSVYGTLIGSLSGAAPPVIGYCTVTAQFDMGAFILLLLFALWQMPHSYAIGIFRFKDYQAANIPVLPVVKGIFITKNHIIFYIFAFMIATLMLTLMGYTGYLFMLTSVVLNGMWLIMAFKGYKASNDSQWAKSIFIFSIVIISSLSMMMSLDFLISKMIGD
SIO_010081: HDEF_RS00465
subclass of: SO_0000673
so part of: HDEF_RS00465
location: complement(66701..67573)
location: region:66701-67573:-1
so has part: feature:66701-67573:-1:exon

WP_012737806.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:66701-67573:-1:exon

HDEF_RS00470
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS00470
old locus tag: HDEF_0067
so part of: sequence
location: complement(67587..67985)
location: region:67587-67985:-1
so has part: feature:67587-67985:-1:exon
subclass of: SO_0000010

66260008
type: Gene
SIO_000068: ncbigene

position:67587:-1
position: 67587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:67985:-1
position: 67985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67587-67985:-1:exon

HDEF_RS00470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS00470
old locus tag: HDEF_0067
EC number: 7.1.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002208652.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome o ubiquinol oxidase subunit IV
translation: MNHLKTDPNQNHAHAIKKPEKTIDHLSAERGGAHQGSLKSYVVGFILSVMLTVIPFMMVMNQSASRTVILATVIATAVVQIIVHLVYFLHMNGASEERWNLVAFIFTVIIIAIVLVGSLWIMHHLNINMMIQ
SIO_010081: HDEF_RS00470
subclass of: SO_0000673
so part of: HDEF_RS00470
location: complement(67587..67985)
location: region:67587-67985:-1
so has part: feature:67587-67985:-1:exon

WP_012737807.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:67587-67985:-1:exon

HDEF_RS00475
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS00475
old locus tag: HDEF_0068
so part of: sequence
location: complement(67986..68618)
location: region:67986-68618:-1
so has part: feature:67986-68618:-1:exon
subclass of: SO_0000010

66260009
type: Gene
SIO_000068: ncbigene

position:67986:-1
position: 67986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68618:-1
position: 68618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67986-68618:-1:exon

HDEF_RS00475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS00475
old locus tag: HDEF_0068
EC number: 7.1.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005163525.1
GO function: GO:0004129 - cytochrome-c oxidase activity [Evidence IEA]
GO process: GO:0022904 - respiratory electron transport chain [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome o ubiquinol oxidase subunit III
translation: MSTESFMINNVSQETMSTQKHDEHHENGSTKIFGFWIYLMSDCILFAALFATYVVLVNGTAGGPMGKDIFNLPFVLVETFLLLFSSMTYGFAILAMNQGQKKSVNIWLGLTFLLGLSFVGMEIFEFHELIGEGAGPDRSAFLSSFFALVGTHGLHVALGLIWIVVMMVQISQRGLNPINQTRLMCLSLFWHFLDVIWICVFTIVYLLGAM
SIO_010081: HDEF_RS00475
subclass of: SO_0000673
so part of: HDEF_RS00475
location: complement(67986..68618)
location: region:67986-68618:-1
so has part: feature:67986-68618:-1:exon

WP_044612213.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:67986-68618:-1:exon

HDEF_RS00480
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: cyoB
locus tag: HDEF_RS00480
old locus tag: HDEF_0069
so part of: sequence
location: complement(68608..70599)
location: region:68608-70599:-1
so has part: feature:68608-70599:-1:exon
subclass of: SO_0000010

66260010
type: Gene
SIO_000068: ncbigene

position:68608:-1
position: 68608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:70599:-1
position: 70599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:68608-70599:-1:exon

HDEF_RS00480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: cyoB
locus tag: HDEF_RS00480
old locus tag: HDEF_0069
EC number: 7.1.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:NP_459438.1
GO function: GO:0004129 - cytochrome-c oxidase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytochrome o ubiquinol oxidase subunit I
translation: MLGKLTFDAIPIHEPIIMVTLAVIMLAGLSLLSAITYFGRWTWLWREWLTSVDHKKIGIMYIIVAMVMLLRGFADAILMRSQQALSSAGEAGFLPAHHYDQIFTAHGVIMIFFVAMPLVIGLMNLVVPLQIGARDMAFPFLNSLSFWLFVAGVVLINLSLGIGEFAQTGWLAYPPLSGKEYSPDVGVDYWIWSLQISGMGTLLTGINLFTTILKMRAPGMSMMKMPVFTWTSFCSNILIIIAFPILTVTIALLTLDRYLGTHFFTNELGGNMMMYINLVWAWGHPEVYILVLPVFGIFSEVTATFSRKRLFGYTSLVWATIVITFLAFIVWLHHFFTMGSGANVNAFFGIATMIISIPTGVKIFNWLFTMYQGRIHFNSAMLWTLGFIVTFSVGGMTGVLLAVPAANFVLHNSLFLIAHFHNVIIGGVVFGCFAGLTYWFPKAFGFTLNEKWGIRAFWFWLIGFFVAFMPLYVLGLMGMTRRLSQNINPQFHPLLMVAAGGAVLIAFGILCQLIQIVVSIRDREKNRDLTGDPWGGRTLEWATSSPSAFYNFAVVPEIKSRDAFFDMKEKGEAYPRPEKYAEIHMSKNSATGIIIAAFSVIFGFAMIWHIWWLAIVGVIGMGATWIAKSFDQDVDYYVPVSDIERIENEHHEYLNKAGLNHVN
SIO_010081: HDEF_RS00480
subclass of: SO_0000673
so part of: HDEF_RS00480
location: complement(68608..70599)
location: region:68608-70599:-1
so has part: feature:68608-70599:-1:exon

WP_012737809.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:68608-70599:-1:exon

HDEF_RS00485
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: cyoA
locus tag: HDEF_RS00485
old locus tag: HDEF_0070
so part of: sequence
location: complement(70603..71523)
location: region:70603-71523:-1
so has part: feature:70603-71523:-1:exon
subclass of: SO_0000010

66260011
type: Gene
SIO_000068: ncbigene

position:70603:-1
position: 70603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:71523:-1
position: 71523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70603-71523:-1:exon

HDEF_RS00485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: cyoA
locus tag: HDEF_RS00485
old locus tag: HDEF_0070
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006535098.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0009486 - cytochrome bo3 ubiquinol oxidase activity [Evidence IEA]
GO process: GO:0015990 - electron transport coupled proton transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ubiquinol oxidase subunit II
translation: MIIKKLIKFLRMLSIFIAPIILSGCDVTLMNPQGAIGIEQKKLILTSVGLMLIVVIPVILMVFIFAWKYRESNKKATYSPDWAHSNKIESVVWIIPIIIIAILGVITWKSAHELDPYKPIVNNKPAMTIEVISLDWKWLFIYPKEGIATVNQLAFPMNVPIHFKITSDSVMNSFFIPQLGSQIYAMPGMQAQLYLIANKPGQYEGISSSYSGRGFSGMKFTAIATKDESDFQHWVSEVKKSPHTLNTFHDFNRLAQPSDHHPVTYFSVVKPFLFQDTIKKFMGDMNMHQNIEMHQTHEALHSTVEE
SIO_010081: HDEF_RS00485
subclass of: SO_0000673
so part of: HDEF_RS00485
location: complement(70603..71523)
location: region:70603-71523:-1
so has part: feature:70603-71523:-1:exon

WP_044612214.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:70603-71523:-1:exon

HDEF_RS00490
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: ubiF
locus tag: HDEF_RS00490
old locus tag: HDEF_0071
so part of: sequence
location: complement(71670..72851)
location: region:71670-72851:-1
so has part: feature:71670-72851:-1:exon
subclass of: SO_0000010

66260012
type: Gene
SIO_000068: ncbigene

position:71670:-1
position: 71670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:72851:-1
position: 72851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:71670-72851:-1:exon

HDEF_RS00490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: ubiF
locus tag: HDEF_RS00490
old locus tag: HDEF_0071
EC number: 1.14.99.60
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004720218.1
GO function: GO:0016709 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen [Evidence IEA]
GO process: GO:0006744 - ubiquinone biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 3-demethoxyubiquinol 3-hydroxylase
translation: MRDYPQNYDVVVVGGGMVGAAAALGLAKNGWSVAVLEPVAPKSFDPESLPDLRISALSGRSVDLLKKLNVWGRVIAMRSAPYRRLETWEWEQAHVSFEADSISRSELGFMIENPLLQLVLWQEIERCSNVTIFCPSRLESMQKTGKTWQLTLNTKEKLKTPLVIGADGLHSKVRLWSGIGSTGWEYRQSCLLMIVKTNQPQQDVTWQQFFPSGPRAFLPLWDDWASLVYYHHPKHIQRLQRMSSSELHQHVHQNFPKKLGNVSIMATGSFPLTRHHAHSYIQAGLALIGDAAHTIHPLAGQGVNLGYRDVSALLEVLHEARSKGECWYSHQVLLRYQHQRQLDNFLMQNTIDLFYNTFSSTLLTMKLARNLALFAAERAGKLKRKVLEYALGY
SIO_010081: HDEF_RS00490
subclass of: SO_0000673
so part of: HDEF_RS00490
location: complement(71670..72851)
location: region:71670-72851:-1
so has part: feature:71670-72851:-1:exon

WP_012737811.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:71670-72851:-1:exon

HDEF_RS00495
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: accC
locus tag: HDEF_RS00495
old locus tag: HDEF_0072
so part of: sequence
location: complement(72874..74217)
location: region:72874-74217:-1
so has part: feature:72874-74217:-1:exon
subclass of: SO_0000010

66260013
type: Gene
SIO_000068: ncbigene

position:72874:-1
position: 72874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:74217:-1
position: 74217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72874-74217:-1:exon

HDEF_RS00495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: accC
locus tag: HDEF_RS00495
old locus tag: HDEF_0072
EC number: 6.3.4.14
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857805.1
GO component: GO:0009317 - acetyl-CoA carboxylase complex [Evidence IEA]
GO function: GO:0003989 - acetyl-CoA carboxylase activity [Evidence IEA]; GO:0004075 - biotin carboxylase activity [Evidence IEA]
GO process: GO:0006633 - fatty acid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acetyl-CoA carboxylase biotin carboxylase subunit
translation: MFDKIVIANRGEIALRILRACKELGIKTVAVHSTVDRDLKHVLLSDESVCIGEAPAPKSYLNIPALISAAEITGADAIHPGYGFLAENADFAEQIECSGFVFIGPKAETIRLMGDKVSAINAMKKAGVPCVPGSDGPLGEDNIQNSRFAERIGYPVIIKASGGGGGRGMRVVHTDKDLAQAISMTRAEAKAAFNNDMVYMEKYLENPRHIEIQVLADKHGNAIYLAERDCSMQRRHQKVLEEAPAPGITHGMRRQIGERCVQACQDIGYHGAGTFEFLYENGEFYFIEMNTRIQVEHPVTEMITGIDLVKEQLRVAVGHRLSFQQNDVVVRGHSLECRINAEDPNTFLPSPGKIMRLHVPGGFGIRWDSHIYAGYTVPPDYDSMIGKLITYGETREVAIARMKNALSEVIIEGIKTNITLQERIVNDDHFQRGGCNIHYLEKKSGSQ
SIO_010081: HDEF_RS00495
subclass of: SO_0000673
so part of: HDEF_RS00495
location: complement(72874..74217)
location: region:72874-74217:-1
so has part: feature:72874-74217:-1:exon

WP_012737812.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:72874-74217:-1:exon

HDEF_RS00500
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: accB
locus tag: HDEF_RS00500
old locus tag: HDEF_0073
so part of: sequence
location: complement(74229..74666)
location: region:74229-74666:-1
so has part: feature:74229-74666:-1:exon
subclass of: SO_0000010

66260014
type: Gene
SIO_000068: ncbigene

position:74229:-1
position: 74229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:74666:-1
position: 74666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74229-74666:-1:exon

HDEF_RS00500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: accB
locus tag: HDEF_RS00500
old locus tag: HDEF_0073
EC number: 6.4.1.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004392389.1
GO component: GO:0009317 - acetyl-CoA carboxylase complex [Evidence IEA]
GO function: GO:0003989 - acetyl-CoA carboxylase activity [Evidence IEA]
GO process: GO:0006633 - fatty acid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acetyl-CoA carboxylase biotin carboxyl carrier protein
translation: MDIRKIKKLIELVEEHDISELAISQGEESIRINRSLPTSTVAMVPAQYSRNSGVISEPETKETSVSLEGHIIRSPMVGTFYRTPSPDASPFVEVGQTVSIGDTLCIVEAMKMMNQIQADQSGVIKAILIENAQPVQFNDPLFIME
SIO_010081: HDEF_RS00500
subclass of: SO_0000673
so part of: HDEF_RS00500
location: complement(74229..74666)
location: region:74229-74666:-1
so has part: feature:74229-74666:-1:exon

WP_012737813.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:74229-74666:-1:exon

HDEF_RS00505
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: aroQ
locus tag: HDEF_RS00505
old locus tag: HDEF_0074
so part of: sequence
location: complement(74677..75156)
location: region:74677-75156:-1
so has part: feature:74677-75156:-1:exon
subclass of: SO_0000010

66260015
type: Gene
SIO_000068: ncbigene

position:74677:-1
position: 74677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:75156:-1
position: 75156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74677-75156:-1:exon

HDEF_RS00505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: aroQ
locus tag: HDEF_RS00505
old locus tag: HDEF_0074
EC number: 4.2.1.10
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015962047.1
GO function: GO:0003855 - 3-dehydroquinate dehydratase activity [Evidence IEA]
GO process: GO:0009423 - chorismate biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II 3-dehydroquinate dehydratase
translation: MPAQLNKYHILLLNGPNLNLLGLREPKQYGSLCLDKMIDLLEAKARTIGCQLSHLQSNAEHALIEKIHASQDNVDFILINPAAFTHTSVALRDALLAVKIPFIEIHLSNVYAREHFRHHSYFSDIAVGVICGLGVNGYDCALQAAVNHLSASFASINRV
SIO_010081: HDEF_RS00505
subclass of: SO_0000673
so part of: HDEF_RS00505
location: complement(74677..75156)
location: region:74677-75156:-1
so has part: feature:74677-75156:-1:exon

WP_044612215.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:74677-75156:-1:exon

HDEF_RS00510
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS00510
old locus tag: HDEF_0075
so part of: sequence
location: complement(75277..76320)
location: region:75277-76320:-1
so has part: feature:75277-76320:-1:exon
subclass of: SO_0000010

66260016
type: Gene
SIO_000068: ncbigene

position:75277:-1
position: 75277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:76320:-1
position: 76320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:75277-76320:-1:exon

HDEF_RS00510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS00510
old locus tag: HDEF_0075
EC number: 2.5.1.54
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002211815.1
GO function: GO:0003849 - 3-deoxy-7-phosphoheptulonate synthase activity [Evidence IEA]
GO process: GO:0009423 - chorismate biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 3-deoxy-7-phosphoheptulonate synthase
translation: MSIDRLRKQPINSLISQEELEKKLPISDAIASQVISGRRRIERILEGRDPRLLVIIGPCSIHDSNAAIEYATRMKTLSEQYQNQLEIVMRTYFEKPRTAAGWKGMISDPLLDGSSQVNLGIEMARKVLLDINRLGLPTATEFLDIIMGQYIADLISWGAIGARTTESQIHRQMASALSCPIGFKNGTDGNIDIAIDAVRVASASHIFVSPNKKGEMTIYQTLGNPYGHVVMRGGKKPNYSAKDIALACHKLRDFHLPEHVVVDLSHGNCQKRYRHQLSVSHSMAEQIRSGSKAILGVMIESFLIEGSQQIVPEKPLIYGQSVTDSCLSWSNTEDLLYELSEAVKARF
SIO_010081: HDEF_RS00510
subclass of: SO_0000673
so part of: HDEF_RS00510
location: complement(75277..76320)
location: region:75277-76320:-1
so has part: feature:75277-76320:-1:exon

WP_044612424.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:75277-76320:-1:exon

HDEF_RS00515
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: tusB
locus tag: HDEF_RS00515
old locus tag: HDEF_0076
so part of: sequence
location: complement(76574..76855)
location: region:76574-76855:-1
so has part: feature:76574-76855:-1:exon
subclass of: SO_0000010

66260017
type: Gene
SIO_000068: ncbigene

position:76574:-1
position: 76574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:76855:-1
position: 76855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:76574-76855:-1:exon

HDEF_RS00515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: tusB
locus tag: HDEF_RS00515
old locus tag: HDEF_0076
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857802.1
GO function: GO:0016782 - transferase activity, transferring sulphur-containing groups [Evidence IEA]
GO process: GO:0002098 - tRNA wobble uridine modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sulfurtransferase complex subunit TusB
translation: MLYTLSRSPYRTDCLALSHFLSKDDDLLFMQDGVIALLNKSYFFKCHELTNVFILEEDLMARGLQFFMPKEARRINYQDFVQLTIKHKQHIAW
SIO_010081: HDEF_RS00515
subclass of: SO_0000673
so part of: HDEF_RS00515
location: complement(76574..76855)
location: region:76574-76855:-1
so has part: feature:76574-76855:-1:exon

WP_012737816.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:76574-76855:-1:exon

HDEF_RS00520
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: tusC
locus tag: HDEF_RS00520
old locus tag: HDEF_0077
so part of: sequence
location: complement(76868..77239)
location: region:76868-77239:-1
so has part: feature:76868-77239:-1:exon
subclass of: SO_0000010

66260018
type: Gene
SIO_000068: ncbigene

position:76868:-1
position: 76868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:77239:-1
position: 77239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:76868-77239:-1:exon

HDEF_RS00520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: tusC
locus tag: HDEF_RS00520
old locus tag: HDEF_0077
EC number: 2.8.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004951206.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sulfurtransferase complex subunit TusC
translation: MKSIAFIFTQAPHGSANGREGLDALLATSGLIQNPENTIGVFFISDGVLQLLPQQRPEMILARNYIDTFGVLTLYDVKKCYICLHSLKERGLKEFGHWVLDVEVLSAGCLRKKLANYDICLTF
SIO_010081: HDEF_RS00520
subclass of: SO_0000673
so part of: HDEF_RS00520
location: complement(76868..77239)
location: region:76868-77239:-1
so has part: feature:76868-77239:-1:exon

WP_012737817.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:76868-77239:-1:exon

HDEF_RS00525
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: tusD
locus tag: HDEF_RS00525
old locus tag: HDEF_0078
so part of: sequence
location: complement(77253..77651)
location: region:77253-77651:-1
so has part: feature:77253-77651:-1:exon
subclass of: SO_0000010

66260019
type: Gene
SIO_000068: ncbigene

position:77253:-1
position: 77253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:77651:-1
position: 77651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:77253-77651:-1:exon

HDEF_RS00525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: tusD
locus tag: HDEF_RS00525
old locus tag: HDEF_0078
EC number: 2.8.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002212320.1
GO function: GO:0016783 - sulfurtransferase activity [Evidence IEA]
GO process: GO:0008033 - tRNA processing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sulfurtransferase complex subunit TusD
translation: MKKLSYCLLVTGPPYGTEQASSAYQFAKALLDTKHRLISIFFYQDGVFNANRFVTPASDEFDLVRAWHQLALDHHIMLNVCISAASRRGVGCLQQEQIQSYSSSYNLQNGFTLSGLTALVEALLTCDRVIQF
SIO_010081: HDEF_RS00525
subclass of: SO_0000673
so part of: HDEF_RS00525
location: complement(77253..77651)
location: region:77253-77651:-1
so has part: feature:77253-77651:-1:exon

WP_012737818.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:77253-77651:-1:exon

HDEF_RS00530
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: fkpA
locus tag: HDEF_RS00530
old locus tag: HDEF_0079
so part of: sequence
location: complement(77708..78466)
location: region:77708-78466:-1
so has part: feature:77708-78466:-1:exon
subclass of: SO_0000010

66260020
type: Gene
SIO_000068: ncbigene

position:77708:-1
position: 77708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:78466:-1
position: 78466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:77708-78466:-1:exon

HDEF_RS00530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: fkpA
locus tag: HDEF_RS00530
old locus tag: HDEF_0079
EC number: 5.2.1.8
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012737819.1
GO function: GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]
GO process: GO:0006457 - protein folding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FKBP-type peptidyl-prolyl cis-trans isomerase
translation: MKSLFKILLFTTTTALTFNMTQAFATETSKAPVVNHKNQDAYALGTSFGRYLKEQEKLGINLDKKELMQGLEDVFSNTNKLTTEEMEKTLTLFQEKVKTAIGAKMEKDFEKNVSKGGEYSEKFSKETGVKKTQSGLLYKIEKAGNGKAPKDTDTVVVHYIGSLIDGTEFDNSIKRGEPLSIPLNNLIVGWKEGLQKIGKGGKIKLVIPQQLAYGKNPISTIPAGSTLVFDVELLDIKPASETKVDPSEGTKQ
SIO_010081: HDEF_RS00530
subclass of: SO_0000673
so part of: HDEF_RS00530
location: complement(77708..78466)
location: region:77708-78466:-1
so has part: feature:77708-78466:-1:exon

WP_012737819.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:77708-78466:-1:exon

HDEF_RS00535
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS00535
old locus tag: HDEF_0080
so part of: sequence
location: 78664..82293
location: region:78664-82293:1
so has part: feature:78664-82293:1:exon
subclass of: SO_0000010

66260021
type: Gene
SIO_000068: ncbigene

position:78664:1
position: 78664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:82293:1
position: 82293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78664-82293:1:exon

HDEF_RS00535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS00535
old locus tag: HDEF_0080
inference: COORDINATES: protein motif:HMM:NF012707.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transporter substrate-binding domain-containing protein
translation: MKKFFILIFFILFFVSSNSAFAIIPREVDIISRQKMPFLQLQLDDDVQENLKNKKEIRVAIYPPQNPPFSIMFECKKFEGISADYMFLIAHYLGLKPRVLLYPSRQEALEALSASSVDMVISDAGELDEKNEHFSHSAHFMPKHLALVSRKMTDPNLQQNKTSIRLALSQNYVDQNWLKNQFPNANISRYSSVYDAISSVAFGDNDYFLGNLASANFFIENNYKNILNVVHIYFEQRIGSYFLMQKNDPLFLKGVNTVLKSIPITQRQSIFRQWSQRFDARHCQFSSLLTEKEKEWIEQNRQQKVLVNPLYSPFTFFDESSKFHGISADILELIHLRTGLDFLPVKVHSVTEMMNFLQKGKGDIISAVSYSHSRNQKILLTRPYLSSPTVLVTRDTPISANFLSNNIKLAVTSGSHVIEWLRVNYPKIMLIPIENTTLALEMLERNKVDGVVYNLIGANYMIDHYFRGKLKIAKRLSELSSVISFGVNPDNTELNSILNKALIDISPREISLILNKWQDAPDVKLYSWNFYSTEFYLLAALFSVLVLTSLMWIYYLRREILSRHTIQLKLQEEVTLRETLLNSIPVPVYVVDRDGYIINRNQAWNVFFEQKKMDLTEFPLSSFSHPLSAVYPSLQNIFKNPSIEKTVSAQRYTVNNGLENRIILHQAVPFIDRTGQPAGLICSWQDMTLYENLLKILSITRERAEQANRAKSTFLATMSHEIRTPISAIIGLLELVVTSKEHVVSDDEPIYVAYQSAQSLLGLIGDILDMAKIESGKLELNPAWVSFHELILPVVKVFDGLARQKNLRLSCEIKTGHPDEVYIDPMRFRQVLSNLLSNAIKFTEIGSVDVLVKCISKKEPLETHQIQRLEVKVKDTGVGISQADQKLVFQPYSQSDFGKKQSGTGLGLSICLQLMQMMNGSIKLNSELHQGTCVELSVPIQCRANIHQAKEEKQLISENVQKSFSLRILVVDDHPANRLLLKSQLTRLGHQVVVAENGVQALELWKNDVFDVVITDCSMPVMDGPTLTRHLREASKGPLIILGLTAHAREEEKVAYLAAGMDDCLFKPLRLSQLDAWLNKLACRLEKKAEPLNTLNNLVSMETLNQFTQEDPVMLRELLMTTRDENISDMKQAKVLLEEAKWPGFTQCLHRIAGALHIIGANELAGSCRELEKECQKSSPNKQMIEEKFETILKNLEEINRAIFDTYLK
SIO_010081: HDEF_RS00535
subclass of: SO_0000673
so part of: HDEF_RS00535
location: 78664..82293
location: region:78664-82293:1
so has part: feature:78664-82293:1:exon

WP_012737820.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:78664-82293:1:exon

HDEF_RS00540
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS00540
old locus tag: HDEF_0081
so part of: sequence
location: 82410..83477
location: region:82410-83477:1
so has part: feature:82410-83477:1:exon
subclass of: SO_0000010

66260022
type: Gene
SIO_000068: ncbigene

position:82410:1
position: 82410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:83477:1
position: 83477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:82410-83477:1:exon

HDEF_RS00540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS00540
old locus tag: HDEF_0081
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012737821.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: rhodanese-related sulfurtransferase
translation: MPVLHNRISNQKLKEKMLAETQERQTLSFYKYFALDNPSMFRDKLYTQWNQLSVFGRVYIAKEGINAQISVPIDHYNDFKASLFNAHPALDQIRLNTALEDNGRSFWVLRMKVRQRIVADGIEDETFNPAHTGQYLKAHEVNEMIKDPDALFVDMRNHYEYEVGHFKNAIKVPSDTFREQLPMAVDMLKEDKEKKMVLYCTGGIRCEKASAYLLHHGFKNVYHVEGGIIEYVRTAKKKDLPLHFIGKNFVFDERMGERVSEEVIAHCHQCEQFCDTHVNCHNSACHLLFIQCAICSEKFSGCCSAICQEELELSPEEQRLRRSARGNKIKIFNKSKDVLETIMNKSIIDQGNKEG
SIO_010081: HDEF_RS00540
subclass of: SO_0000673
so part of: HDEF_RS00540
location: 82410..83477
location: region:82410-83477:1
so has part: feature:82410-83477:1:exon

WP_012737821.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:82410-83477:1:exon

HDEF_RS00545
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: secF
locus tag: HDEF_RS00545
old locus tag: HDEF_0082
so part of: sequence
location: complement(83456..84424)
location: region:83456-84424:-1
so has part: feature:83456-84424:-1:exon
subclass of: SO_0000010

66260023
type: Gene
SIO_000068: ncbigene

position:83456:-1
position: 83456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:84424:-1
position: 84424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:83456-84424:-1:exon

HDEF_RS00545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: secF
locus tag: HDEF_RS00545
old locus tag: HDEF_0082
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013649437.1
GO component: GO:0031522 - cell envelope Sec protein transport complex [Evidence IEA]
GO function: GO:0015450 - protein-transporting ATPase activity [Evidence IEA]
GO process: GO:0043952 - protein transport by the Sec complex [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: protein translocase subunit SecF
translation: MSQNYTVEQLNYGRKVYNFMRWDNVAFGISFVLMAAAVLIISIRGFNWGLDFTGGTVIEITMEQPAPLDQIRDALKIAGLVGPVVQNFGTTRDLMIRMSAKHNNAIQELGQKIITIIDQSTNQKTILKRVEFVGPSVGSELAQTGSMALLVALLSILIYVGLRFEWRLALGTVLALGHDVIITLGILSLFKIEIDLTILASLMSVIGYSLNDSIVVSDRIRENFRQIRRGTSYEIINVSLTQTLSRTIMTSATTLIVVFMLYLFGGAMLHGFSLTMLIGISIGTLSSIYVASALALKLGMKREHMIQQKVKKEGEDQPSLLP
SIO_010081: HDEF_RS00545
subclass of: SO_0000673
so part of: HDEF_RS00545
location: complement(83456..84424)
location: region:83456-84424:-1
so has part: feature:83456-84424:-1:exon

WP_012737822.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:83456-84424:-1:exon

HDEF_RS00550
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: secD
locus tag: HDEF_RS00550
old locus tag: HDEF_0083
so part of: sequence
location: complement(84449..86302)
location: region:84449-86302:-1
so has part: feature:84449-86302:-1:exon
subclass of: SO_0000010

66260024
type: Gene
SIO_000068: ncbigene

position:84449:-1
position: 84449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:86302:-1
position: 86302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:84449-86302:-1:exon

HDEF_RS00550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: secD
locus tag: HDEF_RS00550
old locus tag: HDEF_0083
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005125127.1
GO component: GO:0031522 - cell envelope Sec protein transport complex [Evidence IEA]
GO function: GO:0015450 - protein-transporting ATPase activity [Evidence IEA]
GO process: GO:0043952 - protein transport by the Sec complex [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: protein translocase subunit SecD
translation: MLNRYPLWKYVMLIFVILLSFLYALPNFYGEDPAVQITGVRGNAASELTLNQVHDILKKNHLTSQSIALKNGTILVRFKDPNVQLAARDVLISILGDSYVVALNLAPATPIWLRALGADPMKLGLDLRGGVHFLMEVDMDAILSKLQIQNMDSLRRELQEKNITYTQITKQNSTHGYGIEIDFSDAKSRDEAMSYLSSRQKHMLINADRGNKLKALMTSDRLREVREYAVQQNMTILRNRVNQIGVAEPLVQRQGDRIVVELPGIQDTARAKEILGATASLEFHLVNTKVTPEAAAIGRVPADTEIKKDRDGRLVALYKKVIMTGDHITDAFFGIDEYNRPQVNISLDSLGSAIMSDFTKDNIGKLMASLYVEYKDSGNKDINGRPILVKQEEVINAANISSRFGGRFQITGIGTPSEARQLALLLRAGALIAPIQIVEERTIGPTLGAQNISQGLDACLAGLAASILFMVVYYRKFGMIASTALLVNLVLIVGVMSLLPGVTLTMPGIAGIVLTLAVAVDANVLINERIKEELRNARSIQQAIHEGYKGAFSSIIDANITTLITAIILYAVGTGSIKGFAITTIIGVLTSMFTAILGTRAIVNMLYGAKRIEKLSI
SIO_010081: HDEF_RS00550
subclass of: SO_0000673
so part of: HDEF_RS00550
location: complement(84449..86302)
location: region:84449-86302:-1
so has part: feature:84449-86302:-1:exon

WP_012737823.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:84449-86302:-1:exon

HDEF_RS00555
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: yajC
locus tag: HDEF_RS00555
old locus tag: HDEF_0084
so part of: sequence
location: complement(86448..86789)
location: region:86448-86789:-1
so has part: feature:86448-86789:-1:exon
subclass of: SO_0000010

66260025
type: Gene
SIO_000068: ncbigene

position:86448:-1
position: 86448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:86789:-1
position: 86789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:86448-86789:-1:exon

HDEF_RS00555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: yajC
locus tag: HDEF_RS00555
old locus tag: HDEF_0084
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857673.1
GO component: GO:0005886 - plasma membrane [Evidence IEA]
GO function: GO:0015450 - protein-transporting ATPase activity [Evidence IEA]
GO process: GO:0009306 - protein secretion [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: preprotein translocase subunit YajC
translation: MNIFSQAFASTSEAPQGNPYSLIIMLVIFGLIFYFMILRPQQKRTKDHKKLMDSISKGDEVLTTGGLVGHVSKVTETGYIVMSLNDTTEVTIKRDFVAAVLPKGTMKNLSSSS
SIO_010081: HDEF_RS00555
subclass of: SO_0000673
so part of: HDEF_RS00555
location: complement(86448..86789)
location: region:86448-86789:-1
so has part: feature:86448-86789:-1:exon

WP_012737824.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:86448-86789:-1:exon

HDEF_RS00560
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: tgt
locus tag: HDEF_RS00560
old locus tag: HDEF_0085
so part of: sequence
location: complement(86946..88058)
location: region:86946-88058:-1
so has part: feature:86946-88058:-1:exon
subclass of: SO_0000010

66260026
type: Gene
SIO_000068: ncbigene

position:86946:-1
position: 86946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:88058:-1
position: 88058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:86946-88058:-1:exon

HDEF_RS00560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: tgt
locus tag: HDEF_RS00560
old locus tag: HDEF_0085
EC number: 2.4.2.29
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857672.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0008479 - queuine tRNA-ribosyltransferase activity [Evidence IEA]
GO process: GO:0006400 - tRNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA guanosine(34) transglycosylase Tgt
translation: MKYQLQKTDGRARLGKLIFERGLVDTPAFMPVGTYGSVKSMTPDEITETGAQIILGNTFHLWLRPGQDVIKLHGDLHDFMQWQGPILTDSGGFQVFSLNSMRKIEEKGVSFRHPLNGSEIFLSPEKSMEIQLDLGSDIVMVFDECPPYPSDLIYMKSSMEMSLRWANRSREHFNNLNNKNALFGIIQGGLSLELRETSLQGLLQIGFDGYAIGGLAVGEPKEEMYRVLDFLCPRIPDNKPRYLMGVGKPENLVEGVRRGIDMFDCVMPTRNARNGHLFVTHGVIKIRNTRYKTDISPLDPDCDCYTCRHYSRAYLHHLDRCNEILGARLNSIHNVRYYQRLMADLRHAIYEERLECFVEEFYKKIGLSIS
SIO_010081: HDEF_RS00560
subclass of: SO_0000673
so part of: HDEF_RS00560
location: complement(86946..88058)
location: region:86946-88058:-1
so has part: feature:86946-88058:-1:exon

WP_012737825.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:86946-88058:-1:exon

HDEF_RS00565
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: queA
locus tag: HDEF_RS00565
old locus tag: HDEF_0086
so part of: sequence
location: complement(88097..89170)
location: region:88097-89170:-1
so has part: feature:88097-89170:-1:exon
subclass of: SO_0000010

66260027
type: Gene
SIO_000068: ncbigene

position:88097:-1
position: 88097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:89170:-1
position: 89170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:88097-89170:-1:exon

HDEF_RS00565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: queA
locus tag: HDEF_RS00565
old locus tag: HDEF_0086
EC number: 2.4.99.17
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012737826.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0051075 - S-adenosylmethionine:tRNA ribosyltransferase-isomerase activity [Evidence IEA]
GO process: GO:0008616 - queuosine biosynthetic process [Evidence IEA]; GO:0006400 - tRNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA
translation: MRLSDFSFELPESLVAQYPLEKRSDCRLLCLNGETGTMTEGVFTDLLYQLEQGDLLVLNNTRVIPARVFGRKPSGGKLEILVERILSPNRVLVHLKSSKTPKLGAQFLLGDTANIPVTLMARHASLFELRFDVREDALMLLQSIGHIPLPPYIPRADEPKDHELYQTVYGQHLGAVAAPTAGLHFDNPLLNALKARGIETAFVTLHVGAGTFQPVKTDNITEHVMHSEYAEVSQEVVDAVLACKARGKRVVAVGTTSVRSLETAAQKTKNSFLTPFSGETSIFIYPGYQYQIVDALITNFHLPKSTLIMLVCAFAGYQNTLRAYKKAIDEKYRFFSYGDAMFISHNPKAAQENRVKK
SIO_010081: HDEF_RS00565
subclass of: SO_0000673
so part of: HDEF_RS00565
location: complement(88097..89170)
location: region:88097-89170:-1
so has part: feature:88097-89170:-1:exon

WP_012737826.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:88097-89170:-1:exon

HDEF_RS00570
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS00570
old locus tag: HDEF_0087
so part of: sequence
location: 89527..90150
location: region:89527-90150:1
so has part: feature:89527-90150:1:exon
subclass of: SO_0000010

66260028
type: Gene
SIO_000068: ncbigene

position:89527:1
position: 89527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:90150:1
position: 90150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:89527-90150:1:exon

HDEF_RS00570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS00570
old locus tag: HDEF_0087
EC number: 1.11.1.24
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012737827.1
GO function: GO:0051920 - peroxiredoxin activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peroxiredoxin C
translation: MTLVTYIAPDFTAPAVLENGEVTENFNFWSYIKDKPCVLFFWPMDFTFVCPSELIAFHERNEAFKNRNTKLVGVSLDSHFVHKQWRNTPIEKGGIGKVSYPLVADIKREIQKGYGIEHPEAGVALRASFLIDENRVIRHQVVNDLPLGRNVDEMLRMVDALAFHQTHGEVCPAQWEEGKSGMQASSDGVAKYLSEHVSDLKRSSTKS
SIO_010081: HDEF_RS00570
subclass of: SO_0000673
so part of: HDEF_RS00570
location: 89527..90150
location: region:89527-90150:1
so has part: feature:89527-90150:1:exon

WP_012737827.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:89527-90150:1:exon

HDEF_RS00575
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: mlaA
locus tag: HDEF_RS00575
old locus tag: HDEF_0088
so part of: sequence
location: 90250..91032
location: region:90250-91032:1
so has part: feature:90250-91032:1:exon
subclass of: SO_0000010

66260029
type: Gene
SIO_000068: ncbigene

position:90250:1
position: 90250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:91032:1
position: 91032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90250-91032:1:exon

HDEF_RS00575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: mlaA
locus tag: HDEF_RS00575
old locus tag: HDEF_0088
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012737828.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phospholipid-binding lipoprotein MlaA
translation: MKLRLIGWICTSLLLAGCSHSYSSNQSHQKSSGQPQSLSGVEKFNRSMFDLNYRILDPHLTRPLAVFWQNYVPQSARNGLSNFLSNLEEPASMVNALLVANPYKAMQYFSRFFLNTFLGMGGLIDIASMAHPQLAKEFPYRFGSVLGRYHAGYGPYFVFPVYGSFTFREDAGQWVDATYPLLSYLTTWMFAGKWVLQGIETRARLLNSEGLLMNSSDPYSVVEKAYFQRYDFLAHGGILKPEINPNAKAIADDLQNIDSP
SIO_010081: HDEF_RS00575
subclass of: SO_0000673
so part of: HDEF_RS00575
location: 90250..91032
location: region:90250-91032:1
so has part: feature:90250-91032:1:exon

WP_012737828.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:90250-91032:1:exon

HDEF_RS00580
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: plsB
locus tag: HDEF_RS00580
old locus tag: HDEF_0089
so part of: sequence
location: 91183..93633
location: region:91183-93633:1
so has part: feature:91183-93633:1:exon
subclass of: SO_0000010

66260030
type: Gene
SIO_000068: ncbigene

position:91183:1
position: 91183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:93633:1
position: 93633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:91183-93633:1:exon

HDEF_RS00580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: plsB
locus tag: HDEF_RS00580
old locus tag: HDEF_0089
EC number: 2.3.1.15
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012737829.1
GO function: GO:0004366 - glycerol-3-phosphate O-acyltransferase activity [Evidence IEA]
GO process: GO:0008654 - phospholipid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycerol-3-phosphate 1-O-acyltransferase PlsB
translation: MSDRCKIYYQSLYLFVKIFIKSKLIPKNFVTDSGLDSSSPIFYILPSRSKMDLIILREESLKQGLPDPLTPLKVDEIQIPRYLFIDDIKESHGHSPSSAETLFSRYLGLYSKNSTLDITILPVSVMIGRRPISICQNRKINRLQKFFTAFWLGRDSFVHFSNPISLSRIINAHSKDLRIVYKLARVARIHFFRQYLSSVGRALPVHSDLFKKLLSSEAIEKALLDEARSKKISPQKAHDNALRLMKEIASQVSYETIRLSDRVLGWMWNRFYQGIHVHNADCVRQLAYKGHSIVYVPCHRSHMDYLLLSYVLYYEGLATPHIAAGINLNFWPAGAIFRRLGAFFIRRNFKGNKLYSTIFRAYLDELFTGGYPVEYFIEGGRSRTGLLLEPKTGTLSMTIQAMLRDISPSITLIPVYIGYEHVIEVLSYTKELRGERKKKENFFQMIGGLRQLRHLGQGYVNFGEPIQLKLYLDKNVPDWRESIRPINKIEATRPHWLASTVKDLAYQIMININHAAAINAINLCSTALLASENQALTRPELLEQLNCYLQLMRHAPHNQYSSVTDQMPEELLDHALHMNKFVVQKNHPHERICLPKEQVPLMRYYRNNIQHLLILPSLIATTVLCHHNISRQEIIRQITLLYPVFKIRWFLYYSEKQLLEALNLLMDELIRQKCVENKNHHFVVNLSSGMMTLKILASGIKEILQHYSIIFFLLTVYPDIDRKSLEKESRAMAKHLCILENMPSAEFFHSSIFSGLLTLLFEKREKMVSNDYSAQKNIEEIFNILKGLISSQMISVMQENFSLKKEWLTYKKKTTD
SIO_010081: HDEF_RS00580
subclass of: SO_0000673
so part of: HDEF_RS00580
location: 91183..93633
location: region:91183-93633:1
so has part: feature:91183-93633:1:exon

WP_012737829.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:91183-93633:1:exon

HDEF_RS00585
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: rhlB
locus tag: HDEF_RS00585
old locus tag: HDEF_0090
so part of: sequence
location: complement(93636..94904)
location: region:93636-94904:-1
so has part: feature:93636-94904:-1:exon
subclass of: SO_0000010

66260031
type: Gene
SIO_000068: ncbigene

position:93636:-1
position: 93636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:94904:-1
position: 94904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:93636-94904:-1:exon

HDEF_RS00585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: rhlB
locus tag: HDEF_RS00585
old locus tag: HDEF_0090
EC number: 3.6.4.13
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012737830.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0003724 - RNA helicase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-dependent RNA helicase RhlB
translation: MNKTHLTDQKFSDFALHPLVIKAIENQGFYHCTPIQALSFPITLAGRDVAAQAQTGTGKTLAFLASVFNYLLTNAADETRQCEQPRALIMVPTRELAIQIYTDAETLSQFTSLKMGLAYGGDGYDKQLKILESGVDILIGTPGRIIDYAKQNFIHLNALQVIVLDEADRMYDLGFIKDIRWLFRRMPPAEKRLNMLFSATLSYRVRELSFEQMNHPEYIEVEPLQKIGSQIQEELFYPSNEDKMRLLQTLIEEEWPDRCIIFANTKQRCEDIWGHLVADGHRVGLLTGDVAQRKRIQILDDFSKGYLDILVATDVAARGLHIPKVTHVFNYDLPENVEDYIHRIGRTGRAGEKGYSISLACEAFASHLSTIEACTGHRIPTSEYNKEALLTDLPQPKRLQRHHRHYAGSRNQGASRKPRSPQ
SIO_010081: HDEF_RS00585
subclass of: SO_0000673
so part of: HDEF_RS00585
location: complement(93636..94904)
location: region:93636-94904:-1
so has part: feature:93636-94904:-1:exon

WP_012737830.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:93636-94904:-1:exon

HDEF_RS00590
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: trxA
locus tag: HDEF_RS00590
old locus tag: HDEF_0091
so part of: sequence
location: 95017..95343
location: region:95017-95343:1
so has part: feature:95017-95343:1:exon
subclass of: SO_0000010

66260032
type: Gene
SIO_000068: ncbigene

position:95017:1
position: 95017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:95343:1
position: 95343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95017-95343:1:exon

HDEF_RS00590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: trxA
locus tag: HDEF_RS00590
old locus tag: HDEF_0091
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017492509.1
GO function: GO:0015035 - protein-disulfide reductase activity [Evidence IEA]
GO process: GO:0006662 - glycerol ether metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thioredoxin TrxA
translation: MSKEIIQLSDKSFDRDVLKADGLILVDFWAQWCGPCKMIAPILDEIANEYVDKITITKLEIDTNPNTTQKYGIRSIPTLLLFKEGKPIDTKVGAVSKHELKKFLDKHV
SIO_010081: HDEF_RS00590
subclass of: SO_0000673
so part of: HDEF_RS00590
location: 95017..95343
location: region:95017-95343:1
so has part: feature:95017-95343:1:exon

WP_012737831.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:95017-95343:1:exon

HDEF_RS00595
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: fabB
locus tag: HDEF_RS00595
old locus tag: HDEF_0092
so part of: sequence
location: complement(95464..96681)
location: region:95464-96681:-1
so has part: feature:95464-96681:-1:exon
subclass of: SO_0000010

66260033
type: Gene
SIO_000068: ncbigene

position:95464:-1
position: 95464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:96681:-1
position: 96681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95464-96681:-1:exon

HDEF_RS00595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: fabB
locus tag: HDEF_RS00595
old locus tag: HDEF_0092
EC number: 2.3.1.41
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012737832.1
GO function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein] synthase activity [Evidence IEA]
GO process: GO:0006633 - fatty acid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: beta-ketoacyl-ACP synthase I
translation: MKRAVVTGLGIISSIGNDKNEVLSSLYAGRSGITFSEEFKNSGMKSHVWGNVKLDTTGMIDRKISRFMSDASIYAYLAMQQSIEDADLNNFDISSNERIGLVVGSGGGSPKNQVAGSDKMRMNGLRGVGPYMVTKAMASGVSACLATPFKIKGVNYSISSACATSAHCVGHALELIQLGKQDIVFAGGAEELCWEMACEFDAMGALSTQYNATPEKASRAYDKNRDGFVIAGGGGMVVVEELEHALSRHAPIYGEIVGYGATSDGANMVAPSGEGAARCMKMAQKGLEVTIDYINVHGTSTPLGDIKELEAIKSVFGHHSPFFSSTKSMTGHSLGAAGVHEIIYSLLMAKHNFIAPSINIETLVPEAVGMNVVTEMKELAINTVMSNSFGFGGTNATLIFSKYPR
SIO_010081: HDEF_RS00595
subclass of: SO_0000673
so part of: HDEF_RS00595
location: complement(95464..96681)
location: region:95464-96681:-1
so has part: feature:95464-96681:-1:exon

WP_012737832.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:95464-96681:-1:exon

HDEF_RS00600
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS00600
old locus tag: HDEF_0093
so part of: sequence
location: complement(96827..97099)
location: region:96827-97099:-1
so has part: feature:96827-97099:-1:exon
subclass of: SO_0000010

66260034
type: Gene
SIO_000068: ncbigene

position:96827:-1
position: 96827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:97099:-1
position: 97099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:96827-97099:-1:exon

HDEF_RS00600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS00600
old locus tag: HDEF_0093
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857600.1
GO function: GO:0097573 - glutathione oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GrxA family glutaredoxin
translation: MFIVIFGRPKCPYCTRAIELAQKLKSELKDKNINFDYIDMHAEKITKADLEKTVGKPVETVPQIFIDKQHIGGYTEFAAYVNKHFHDLKF
SIO_010081: HDEF_RS00600
subclass of: SO_0000673
so part of: HDEF_RS00600
location: complement(96827..97099)
location: region:96827-97099:-1
so has part: feature:96827-97099:-1:exon

WP_012737833.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:96827-97099:-1:exon

HDEF_RS00605
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: dapE
locus tag: HDEF_RS00605
old locus tag: HDEF_0094
so part of: sequence
location: complement(97158..98300)
location: region:97158-98300:-1
so has part: feature:97158-98300:-1:exon
subclass of: SO_0000010

66260035
type: Gene
SIO_000068: ncbigene

position:97158:-1
position: 97158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:98300:-1
position: 98300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:97158-98300:-1:exon

HDEF_RS00605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: dapE
locus tag: HDEF_RS00605
old locus tag: HDEF_0094
EC number: 3.5.1.18
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857601.1
GO function: GO:0009014 - succinyl-diaminopimelate desuccinylase activity [Evidence IEA]
GO process: GO:0009089 - lysine biosynthetic process via diaminopimelate [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: succinyl-diaminopimelate desuccinylase
translation: MNHKICPVVMLAQQLIERRSISPEDAGCQDIIAQHLNYFGFTVEPMHFGDTKNLWAWRGSGEKTLVFVAHTDVVPAGNETLWTTPPFMPSIRDGSLYGRGAADMKGSLAAMIIAAERFVEAHPNHRQKLAFIITSDEEASGANGTSKVVQALMARNEKVDYSLVGEPSSTERIGDVIKNGRRGSLTAQLCIQGVQGHVAYPHLAQNPIHQALGALKELSMIEWDQGNAFFPPTSVQITGLKAGNGVSNLIPDQLHVQFNFRFNTESTYSMIRNQVENLLERYALDYQITWILSGEPFLTPKGELLDAVLNTVQHYCDSPPDILTTGGTSDGRFIALMGAQVVELGPINQSIHKVNESVSIADLQLLTKMYQRIMEQLLLT
SIO_010081: HDEF_RS00605
subclass of: SO_0000673
so part of: HDEF_RS00605
location: complement(97158..98300)
location: region:97158-98300:-1
so has part: feature:97158-98300:-1:exon

WP_012737834.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:97158-98300:-1:exon

HDEF_RS00610
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS00610
old locus tag: HDEF_0095
so part of: sequence
location: complement(98297..98653)
location: region:98297-98653:-1
so has part: feature:98297-98653:-1:exon
subclass of: SO_0000010

66260036
type: Gene
SIO_000068: ncbigene

position:98297:-1
position: 98297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:98653:-1
position: 98653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:98297-98653:-1:exon

HDEF_RS00610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS00610
old locus tag: HDEF_0095
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857602.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ArsC family reductase
translation: MYTLYGIKNCDTIKKTRSWLNEHHVIYRFHDYQVDGLTPGALQNFIACLGWTPLLNTRGTTWRRLSETERAEIRDAASAHSLMLQKPAIIKRPILESSNGVLLLGFNIEQYRHFLKHS
SIO_010081: HDEF_RS00610
subclass of: SO_0000673
so part of: HDEF_RS00610
location: complement(98297..98653)
location: region:98297-98653:-1
so has part: feature:98297-98653:-1:exon

WP_012737835.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:98297-98653:-1:exon

HDEF_RS00615
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: aroQ
locus tag: HDEF_RS00615
old locus tag: HDEF_0096
so part of: sequence
location: 98695..99177
location: region:98695-99177:1
so has part: feature:98695-99177:1:exon
subclass of: SO_0000010

66260037
type: Gene
SIO_000068: ncbigene

position:98695:1
position: 98695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:99177:1
position: 99177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:98695-99177:1:exon

HDEF_RS00615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: aroQ
locus tag: HDEF_RS00615
old locus tag: HDEF_0096
EC number: 5.4.99.5
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857603.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: gamma subclass chorismate mutase AroQ
translation: MSLIGINEIFLLINQRLYYMEDIAAYKAEKQLAIEDVEQEKRILRNAMLLAEQKGITPNSIGPFFSALIHAAKLIQCRYQSDWQKKSITKKHPQNLAQMRYKLIQLNASLIERLYQALIAGQKFDKTTSGSMIKMIHHPQLSETHKRKIVTALQAIHLSQ
SIO_010081: HDEF_RS00615
subclass of: SO_0000673
so part of: HDEF_RS00615
location: 98695..99177
location: region:98695-99177:1
so has part: feature:98695-99177:1:exon

WP_012737836.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:98695-99177:1:exon

HDEF_RS00620
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: yihA
locus tag: HDEF_RS00620
old locus tag: HDEF_0097
so part of: sequence
location: complement(99216..99791)
location: region:99216-99791:-1
so has part: feature:99216-99791:-1:exon
subclass of: SO_0000010

66260038
type: Gene
SIO_000068: ncbigene

position:99216:-1
position: 99216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:99791:-1
position: 99791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:99216-99791:-1:exon

HDEF_RS00620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: yihA
locus tag: HDEF_RS00620
old locus tag: HDEF_0097
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857604.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]
GO process: GO:0042254 - ribosome biogenesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribosome biogenesis GTP-binding protein YihA/YsxC
translation: MSAPNIHHLPPDQGMEVAFAGRSNAGKSSALNTLTQQKNLAKISKTPGRTQLINLFEVAEGIRLVDLPGYGYAAVPLAIKIKWQKALNEYLNKRDCLRGLVILMDIRHPLKNLDQQMIVWAINKRIPVYLLLTKVDKLSRSASKIQLDMVKEAILPFMGDIEVDVFSSLKKIGIDKLQNKLNAWFSGSVNE
SIO_010081: HDEF_RS00620
subclass of: SO_0000673
so part of: HDEF_RS00620
location: complement(99216..99791)
location: region:99216-99791:-1
so has part: feature:99216-99791:-1:exon

WP_216657372.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:99216-99791:-1:exon

HDEF_RS00625
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS00625
old locus tag: HDEF_0100
so part of: sequence
location: complement(100579..101769)
location: region:100579-101769:-1
so has part: feature:100579-101769:-1:exon
subclass of: SO_0000010

66260039
type: Gene
SIO_000068: ncbigene

position:100579:-1
position: 100579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:101769:-1
position: 101769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100579-101769:-1:exon

HDEF_RS00625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS00625
old locus tag: HDEF_0100
EC number: 2.6.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010277029.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: amino acid aminotransferase
translation: MFEKITNAPPDPILGLADSFNADPRDCKINLGIGIYMDETGNTPILNTVKKAEQHLLDHEKTKNYLGIDGLKKFAACTQDLLFGRAHPILMDKRARTAQTPGGTGALRIAADFVTKKAGVKRVWLSRPTWPNHNQIFSSVGLQIVDYDYYDAEHHRLNFTAMLNSLEKIQPGDLVLFHGCCHNPTGIDPTKEQWEVLAEFIKKKGGLPIFDFAYQGFGRGLEEDAEGLRIFSQKHAEFMVCSSYSKNFGLYNERVGACTIVAGDDKTAEAALSQLKTIIRATYSNPPAHGGAIVETILIDDILRNDWEKELTDMRQRIQRMRQLFVQTLKEKGANQDFSFIIDQKGMFSFSGLKTEQVLRLREKFGVYAVNSGRVNVAAMTLNNMVPLCEAIAAVI
SIO_010081: HDEF_RS00625
subclass of: SO_0000673
so part of: HDEF_RS00625
location: complement(100579..101769)
location: region:100579-101769:-1
so has part: feature:100579-101769:-1:exon

WP_012737840.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:100579-101769:-1:exon

HDEF_RS00630
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS00630
old locus tag: HDEF_0101
so part of: sequence
location: 102123..102473
location: region:102123-102473:1
so has part: feature:102123-102473:1:exon
subclass of: SO_0000010

66260040
type: Gene
SIO_000068: ncbigene

position:102123:1
position: 102123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:102473:1
position: 102473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:102123-102473:1:exon

HDEF_RS00630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS00630
old locus tag: HDEF_0101
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019846111.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HIT domain-containing protein
translation: MSKETIFSQIIRREIQAHILYQDELVTAFSDISPQTPVHILIVPNVFIPTLNDVKKQHEPALGRMITVAAKIAHEKGISADGYRLVMNCNDHAGQEIYHIHMHLLGGCPLGPLFKG
SIO_010081: HDEF_RS00630
subclass of: SO_0000673
so part of: HDEF_RS00630
location: 102123..102473
location: region:102123-102473:1
so has part: feature:102123-102473:1:exon

WP_012737841.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:102123-102473:1:exon

HDEF_RS00635
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: lpoB
locus tag: HDEF_RS00635
old locus tag: HDEF_0102
so part of: sequence
location: 102482..103078
location: region:102482-103078:1
so has part: feature:102482-103078:1:exon
subclass of: SO_0000010

66260041
type: Gene
SIO_000068: ncbigene

position:102482:1
position: 102482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:103078:1
position: 103078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:102482-103078:1:exon

HDEF_RS00635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: lpoB
locus tag: HDEF_RS00635
old locus tag: HDEF_0102
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857331.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: penicillin-binding protein activator LpoB
translation: MKKYLLSASIVFLLASCAQPPAKIGRPSKSEPSTVSTDSPEGISSESAEIGIVPLTPKIKSFDWSVPMKPLVENMSQTKDLPNGSVLLVDTVKNNTNGLLQIEKATESLLHILSSNNTFFLISANQLAKAKTALGISKQDNLSSRSKAIALGRYLKAEYVLYTDVSDDIQSPVINMELMLVKTGEIIWADKTAMTLAP
SIO_010081: HDEF_RS00635
subclass of: SO_0000673
so part of: HDEF_RS00635
location: 102482..103078
location: region:102482-103078:1
so has part: feature:102482-103078:1:exon

WP_012737842.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:102482-103078:1:exon

HDEF_RS00640
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: hrpA
locus tag: HDEF_RS00640
old locus tag: HDEF_0103
so part of: sequence
location: complement(103075..106803)
location: region:103075-106803:-1
so has part: feature:103075-106803:-1:exon
subclass of: SO_0000010

66260042
type: Gene
SIO_000068: ncbigene

position:103075:-1
position: 103075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:106803:-1
position: 106803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:103075-106803:-1:exon

HDEF_RS00640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: hrpA
locus tag: HDEF_RS00640
old locus tag: HDEF_0103
EC number: 3.6.4.13
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019452649.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0003724 - RNA helicase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-dependent RNA helicase HrpA
translation: MNHPIFEYPQNLPITQQKQRICETIERHQVVIISGETGSGKTTQLPKICLELGRGGVTGMIGHTQPRRLAAYRVAQRIADELKTPLGERVGYQMRFHQKINENTAIKLMTDGILLAEIQHDRLLMRYDTIIIDEAHERSLNIDFILGYLRQLLPKRPDLKIIITSATLDSQRFSDHFNQAPMIEVSGRSYPVEVRYRPPQKTNESEGEGLQAMIDAVNELYRESTQGDILIFMSGEREIRDATEVLRQENISHTEILPLYSRLSYAEQKKIFQSHVGRRIVLATNVAETSLTVPGIKYVIDTGTARISRYSFRTKIQKLSLEPISQAAANQRKGRCGRISSGICIRLYEEQDFLSRPVFTDPEISRTNLSAVILQMMAFNLGDITSFPFIDLPDKRRIQDGIALLSELGAIEHSPKPNLTKIGRQLSRLTIDPRLGRMILAAQSRSCVQEVMIIAAALSIQDPRERPQDKKQAADEKHHRFSDKDSDFVAFIHLWNYIEEQQNALSVNQFRQLCHREFLHYMRVREWQDIYSQLKKSAQKLGLLTLSINHTEPHYFHVHTALLTGLLSHIGQKDMESHEFTGPRNIRFAIFPHSCLFKKPPKWIMVSELLETRRLWGHIAARIEPEWLEPLAGHLLKRHYSAPHWEKNKGAVIAHEKVTLFGLPIIYDRKINYGAIDPKLCRSLFIRQALVEGEWETTHAFFHQNLKLLSEAEELENKSRRRDIVVDDHTLFEFYDQRIGQEVVSSRHFNHWWKKVFQTDPDLLNFDKSMLITENAQEITEEDFPDFWSQEAFKLDLSYQFEPGNETDGVTVHIPLVMLNQIQSQGFDWQVPGMRFELITALLKSLPKKLRRHFVPVPNYAQAILESIRPSSGSFLSAIEKKLWQMSGVKITREDWQWHQVPEHLKITFRILDDQNQMIKEGKDLEVLRQELTRQFKKTRSTLIENCTFEKQNLKEWNFGTVPLYYESTQENYSIKHYPALVDETHSVALRLFETKQQQKIMMWKGLRRLLLLNMASPAQALRQKWFNKSKLGLYFNPYENIPALLEDCVACSVDKLMAEYGGLVWTQSEFLILKEKIRPKVYEVSEKITREVQQILDKAFSIHKKLQAGCNLAQVPAFTDMKQQLEGLVCPYFISDNSLKPLADILRYLKAIERRLEKLPSQLQTDRSNMAKIHALNDLWIKWKNQLTEWREKEKEIKEVHWMLEELRVSLFAQQLGTAYPISEKRVLNAINKQINGQGQG
SIO_010081: HDEF_RS00640
subclass of: SO_0000673
so part of: HDEF_RS00640
location: complement(103075..106803)
location: region:103075-106803:-1
so has part: feature:103075-106803:-1:exon

WP_012737843.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:103075-106803:-1:exon

HDEF_RS00645
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: bcp
locus tag: HDEF_RS00645
old locus tag: HDEF_0104
pseudo: true
so part of: sequence
location: complement(106800..107285)
location: region:106800-107285:-1
so has part: feature:106800-107285:-1:exon
subclass of: SO_0000010

66260043
type: Gene
SIO_000068: ncbigene

position:106800:-1
position: 106800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:107285:-1
position: 107285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:106800-107285:-1:exon

HDEF_RS00645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: bcp
locus tag: HDEF_RS00645
old locus tag: HDEF_0104
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002913805.1
GO function: GO:0016209 - antioxidant activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: thioredoxin-dependent thiol peroxidase
SIO_010081: HDEF_RS00645
subclass of: SO_0000673
so part of: HDEF_RS00645
location: complement(106800..107285)
location: region:106800-107285:-1
so has part: feature:106800-107285:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:106800-107285:-1:exon

HDEF_RS00650
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: ribB
locus tag: HDEF_RS00650
old locus tag: HDEF_0105
so part of: sequence
location: complement(107334..107990)
location: region:107334-107990:-1
so has part: feature:107334-107990:-1:exon
subclass of: SO_0000010

66260044
type: Gene
SIO_000068: ncbigene

position:107334:-1
position: 107334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:107990:-1
position: 107990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:107334-107990:-1:exon

HDEF_RS00650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: ribB
locus tag: HDEF_RS00650
old locus tag: HDEF_0105
EC number: 4.1.99.12
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012737844.1
GO function: GO:0008686 - 3,4-dihydroxy-2-butanone-4-phosphate synthase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 3,4-dihydroxy-2-butanone-4-phosphate synthase
translation: MNQICLEYFGNSVARVKKALENLKNGHGVMVLDDENRENEGDFVFAAETMTVEQMALTIRHGSGIVCLCLTEERCQQLELPMMVEKNSSTFQTPFTVSIEAAKGVTTGVSASDRITTIKAAISQTAKPADLHRPGHVFPLKGHPKGVLGRSGHTEAAIDLARLAGLKPAGVLCELTNDNGTMARAPEVIAFAKKHKMTVLSIEDLIEYRQTHMETNFS
SIO_010081: HDEF_RS00650
subclass of: SO_0000673
so part of: HDEF_RS00650
location: complement(107334..107990)
location: region:107334-107990:-1
so has part: feature:107334-107990:-1:exon

WP_012737844.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:107334-107990:-1:exon

HDEF_RS00655
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS00655
old locus tag: HDEF_0106
so part of: sequence
location: complement(108191..109966)
location: region:108191-109966:-1
so has part: feature:108191-109966:-1:exon
subclass of: SO_0000010

66260045
type: Gene
SIO_000068: ncbigene

position:108191:-1
position: 108191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:109966:-1
position: 109966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:108191-109966:-1:exon

HDEF_RS00655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS00655
old locus tag: HDEF_0106
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSSIDDIFLTMNLVEMRSVFAKFIRKQVQAKKDKNSVDPNSEYIEFFKIIEANTDLTKKNVINENSLVLISALKEFIFYQAIIVEFKNFLKNMINPEENDINVEQTIDINKEFLDAFITYVQIIKNIYPEEESLGKLEKIFEGMKNQLNDEKNTLADSKSGSKPTELAPPTDVDLKEIDSTLSKLKTINPEQYKNLKKFTENFDAKNVKAISVKTINKKYKEENMTPPTEEEFQILANSDFFRSRKSYLQKTIKINVNDELMFSIKVFSDEEKMSGLAQNEIEEALTNTLTTFNEAFGFIKNNRSSFGRHENKTHFTLHFFKNEKSFYDYTKSKEINLVGYAPNNNIYVYLGGRFQERLNRTIRHEFVHVFMNYSGVGEVINSFSILREGIPTYVAGLSKGENAIHFLSDLKNHLDEKNFNRSLTLKNLLSDQFLKDNNLSHYIAGPVVIAYFEDMFPNVIDELLYDTKDMVEENKEEFFKKIQKLYDEAYSTPFKNWVETHSNEGFHAWLEPAPTKNQDGDGSSAEVTSLSKDALKPEVDSSFQQGDSHQNEAGLLKQGMSQFSSHDAPHVPENPVLHSDVIPTVISNAS
SIO_010081: HDEF_RS00655
subclass of: SO_0000673
so part of: HDEF_RS00655
location: complement(108191..109966)
location: region:108191-109966:-1
so has part: feature:108191-109966:-1:exon

WP_012737845.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:108191-109966:-1:exon

HDEF_RS00660
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: carA
locus tag: HDEF_RS00660
old locus tag: HDEF_0107
so part of: sequence
location: 110085..111245
location: region:110085-111245:1
so has part: feature:110085-111245:1:exon
subclass of: SO_0000010

66260046
type: Gene
SIO_000068: ncbigene

position:110085:1
position: 110085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:111245:1
position: 111245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:110085-111245:1:exon

HDEF_RS00660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: carA
locus tag: HDEF_RS00660
old locus tag: HDEF_0107
EC number: 6.3.5.5
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012737846.1
GO component: GO:0005951 - carbamoyl-phosphate synthase complex [Evidence IEA]
GO function: GO:0004088 - carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO process: GO:0009220 - pyrimidine ribonucleotide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
translation: MMTSALLVLEDGTEFYGRSVGSIGLVVGEVVFNTAMTGYQEILTDPSYLRQIVTLTCPHIGNVGTNLSDAESDKVYVQGLVIRDLSLVASNYRSEETLSDYLKRHHIVAIADIDTRKLTRLLSEKGAQKGCIIASKTLDPVLALEEIHDFPGLKGVDLVKTVSVKTPYDWVEGTGGWLSDGMPNTKKRDASPFHVVVYDYGIKRNMLRMLVDRSCRVTVVPAHTSAQAVISLKPDGVLLSNGPGDPAPCEYAIAAIQDLLEADIPLFGICLGHQLLALASGAKTIKMKFGHHGANHPVKELESGLVMISTQNHSFSVDESTLPPCLRATHRSLFDGSLQGIHHTDKAAFGFQGHPEASPGPHDMAPLFDHFIDLMQMYHEKSLHHL
SIO_010081: HDEF_RS00660
subclass of: SO_0000673
so part of: HDEF_RS00660
location: 110085..111245
location: region:110085-111245:1
so has part: feature:110085-111245:1:exon

WP_171770460.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:110085-111245:1:exon

HDEF_RS00665
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: carB
locus tag: HDEF_RS00665
old locus tag: HDEF_0108
so part of: sequence
location: 111261..114485
location: region:111261-114485:1
so has part: feature:111261-114485:1:exon
subclass of: SO_0000010

66260047
type: Gene
SIO_000068: ncbigene

position:111261:1
position: 111261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:114485:1
position: 114485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:111261-114485:1:exon

HDEF_RS00665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: carB
locus tag: HDEF_RS00665
old locus tag: HDEF_0108
EC number: 6.3.5.5
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857318.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO process: GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: carbamoyl-phosphate synthase large subunit
translation: MPKRTDINSILILGAGPIVIGQACEFDYSGVQACKALREEGYRVILVNSNPATIMTDPDIADATYIEPIHWELVRKIIAKEHPDALLPTMGGQTALNCALELEKKGVLSDYGVTMIGATGEAIDKAEDRRLFDKAMKKIGLNTPRSGIVHSMEEAFSVVSEIGFPCIIRPSFTMGGSGGGIAYNREEFEEICERGFDLSPTHELLIDESLIGWKEYEMEVIRDKNDNCIIVCSIENMDAMGIHTGDSITVAPAQTLTDKEYQRMRHASMSVLREIGVETGGSNVQFAVDPKSGRLVVIEMNPRVSRSSALASKATGFPIAKIAAKLAVGYTLDELKNDITGGRTPASFQPSLDYVVTKMPRFNFEKFAGANDRLTTQMKSVGEVMAIGRTFQESLQKALRGLEVGATGLDPKVSLNDPEAITSIRRELKDAGGERIWYIADAFRAGLSLDAVFDLTEIDSWFLMQIQELVQLEEQLTQTGIQSLDAFFLRHLKRKGFSDARLAKLLAVPEKEIRDRRHQSNLHPVYKRVDTCAAEFRTDTAYLYSTYEEECEARPNHEQKKIMILGGGPNRIGQGIEFDYCCVHASLALHEAGYQTIMVNCNPETVSTDYDISDRLYFESVTLEDVLEIVRIEQPQGVIVQYGGQTPLRLARELEAAGVIILGTSPDAIDRVEDRERFQQAVHRLGLKQPENATAQTLEDAFLKADLLGYPLVVRPSYVLGGRAMEIIYNRVDLQRYFQNAVQVSNDSPVLLDRFLDDAVEVDVDAICDGEHVFIGGIMEHIEEAGVHSGDSACSLPAYTLNEPIQKCMRDQVTKLAFELGVKGLMNVQFAVKKEQLYLIEVNPRAARTVPFVSKATGIPLAKIAAKVMAGQSLVQQNMLNEIIPPYYSVKKVVLPFDKFPGVDPILGPEMHSTGEVMGVGHTFAEAFAKAMLGSHSSMKKTGRVLLSVRDGDKTRVVDLAKQFLQQGFELDATQGTADVLEKAGLPARRVHKVHEGRPHIQDRIKNGEYIYIVNTTSGRQAIEDSKLIRRAALQYKVHYDTTLNGGLATVMSLMENPIEKVISLQELHASFIR
SIO_010081: HDEF_RS00665
subclass of: SO_0000673
so part of: HDEF_RS00665
location: 111261..114485
location: region:111261-114485:1
so has part: feature:111261-114485:1:exon

WP_012737847.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:111261-114485:1:exon

HDEF_RS12885
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS12885
old locus tag: HDEF_0109
pseudo: true
so part of: sequence
location: 114774..114978
location: region:114774-114978:1
so has part: feature:114774-114978:1:exon
subclass of: SO_0000010

70691983
type: Gene
SIO_000068: ncbigene

position:114774:1
position: 114774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:114978:1
position: 114978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:114774-114978:1:exon

HDEF_RS12885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS12885
old locus tag: HDEF_0109
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001259256.1
note: frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: type II toxin-antitoxin system Phd/YefM family antitoxin
SIO_010081: HDEF_RS12885
subclass of: SO_0000673
so part of: HDEF_RS12885
location: 114774..114978
location: region:114774-114978:1
so has part: feature:114774-114978:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:114774-114978:1:exon

HDEF_RS00670
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS00670
old locus tag: HDEF_0110
so part of: sequence
location: 114975..115229
location: region:114975-115229:1
so has part: feature:114975-115229:1:exon
subclass of: SO_0000010

66260048
type: Gene
SIO_000068: ncbigene

position:114975:1
position: 114975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:115229:1
position: 115229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:114975-115229:1:exon

HDEF_RS00670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS00670
old locus tag: HDEF_0110
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000767836.1
GO process: GO:0008219 - cell death [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Txe/YoeB family addiction module toxin
translation: MKIVFSSQSWEDYLYWQQVDKKTLKRINELLRDIQCTPFSGKGKPEPLKHDLSGFWSRRITDEHRLIHGINNTTLKIVSCLYHY
SIO_010081: HDEF_RS00670
subclass of: SO_0000673
so part of: HDEF_RS00670
location: 114975..115229
location: region:114975-115229:1
so has part: feature:114975-115229:1:exon

WP_012737848.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:114975-115229:1:exon

HDEF_RS00675
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS00675
old locus tag: HDEF_0112
so part of: sequence
location: 115498..116220
location: region:115498-116220:1
so has part: feature:115498-116220:1:exon
subclass of: SO_0000010

66260049
type: Gene
SIO_000068: ncbigene

position:115498:1
position: 115498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:116220:1
position: 116220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:115498-116220:1:exon

HDEF_RS00675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS00675
old locus tag: HDEF_0112
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSIKKACKNFVSNLNLFVCKKIRVNKNKFVNLIKIKNSNCSLKTKDVKNENKTNETVEKYAGMSTKKYEENNCTLTHDNLSEQTFDFFQSLPVLPHRIIIDKLNMNQIYNCVKAGINLDENEYPNTTRLVEWINNAPNNDEKKNRLLVSEKILHAIRTKASYLKLEDAPITSLPDLSKLDFVKSISVYDPGHKAFSDLLSREVTAFPTSLTRILCHSVKKEFTKDTPPVLMDMKKWTKIV
SIO_010081: HDEF_RS00675
subclass of: SO_0000673
so part of: HDEF_RS00675
location: 115498..116220
location: region:115498-116220:1
so has part: feature:115498-116220:1:exon

WP_044612218.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:115498-116220:1:exon

HDEF_RS00680
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS00680
old locus tag: HDEF_0113
so part of: sequence
location: complement(116621..116950)
location: region:116621-116950:-1
so has part: feature:116621-116950:-1:exon
subclass of: SO_0000010

66260050
type: Gene
SIO_000068: ncbigene

position:116621:-1
position: 116621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:116950:-1
position: 116950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:116621-116950:-1:exon

HDEF_RS00680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS00680
old locus tag: HDEF_0113
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002210612.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: translation initiation factor
translation: MNDPNSHLIYSTDKNAFPKLEKREPLPIQKDALIRLEYQTHGRKGKGVSLVIGLKGGDEAIASLAAELKKQCGCGGTVKQGIIEIQGDKIAFLKKRLEAEGFKMRLVRG
SIO_010081: HDEF_RS00680
subclass of: SO_0000673
so part of: HDEF_RS00680
location: complement(116621..116950)
location: region:116621-116950:-1
so has part: feature:116621-116950:-1:exon

WP_012737851.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:116621-116950:-1:exon

HDEF_RS00685
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: pyrF
locus tag: HDEF_RS00685
old locus tag: HDEF_0114
so part of: sequence
location: complement(116957..117691)
location: region:116957-117691:-1
so has part: feature:116957-117691:-1:exon
subclass of: SO_0000010

66260051
type: Gene
SIO_000068: ncbigene

position:116957:-1
position: 116957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:117691:-1
position: 117691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:116957-117691:-1:exon

HDEF_RS00685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: pyrF
locus tag: HDEF_RS00685
old locus tag: HDEF_0114
EC number: 4.1.1.23
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012737852.1
GO function: GO:0004590 - orotidine-5'-phosphate decarboxylase activity [Evidence IEA]
GO process: GO:0006207 - 'de novo' pyrimidine nucleobase biosynthetic process [Evidence IEA]; GO:0044205 - 'de novo' UMP biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: orotidine-5'-phosphate decarboxylase
translation: MIFYKPKKNSSHFLSPIIVALDYRDKNKALAFVDKINPQYCQLKVGNEMFTLYGPEWIKELQKRGFQVFLDLKFHDIPNTTARSVASAAELGVWMVNVHASGGGHMMEAAKKTLLPYGKEAPLLIAVTLLTSMTTQDLQPIGIYGEQQEQVTRLAKLSQDSGMDGVVCSAQEAQILRQHCGSSFQLVTPGIRPLNSVNFDQSRTMDPKEALKAGANYLVIGRPITGSEHPVQSLKNLYTLLMNS
SIO_010081: HDEF_RS00685
subclass of: SO_0000673
so part of: HDEF_RS00685
location: complement(116957..117691)
location: region:116957-117691:-1
so has part: feature:116957-117691:-1:exon

WP_012737852.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:116957-117691:-1:exon

HDEF_RS00690
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: lapB
locus tag: HDEF_RS00690
old locus tag: HDEF_0115
so part of: sequence
location: complement(117769..118947)
location: region:117769-118947:-1
so has part: feature:117769-118947:-1:exon
subclass of: SO_0000010

66260052
type: Gene
SIO_000068: ncbigene

position:117769:-1
position: 117769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:118947:-1
position: 118947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:117769-118947:-1:exon

HDEF_RS00690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: lapB
locus tag: HDEF_RS00690
old locus tag: HDEF_0115
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002210615.1
GO function: GO:0005515 - protein binding [Evidence IEA]
GO process: GO:0008653 - lipopolysaccharide metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lipopolysaccharide assembly protein LapB
translation: MLELLFLLLPVAAGYGWYMGSRGFKNNQQQNENRLSRNYVNGLDFLLSNQKDKAFDLFLEMLKKEGSAFEAHLTLGNLFRSRGETDRAIRIHQSLMESASLTFDQRLLAIQQLGRDYMAAGLYDRAERMFNELIEEKNFRVSSLQQLLAIYQAMSEWVNAIKVAQKLIKSGKEHQHLQKKVAHFYCELALKAIAIDDISNAISLLKNAISVNKHCARASIMLGRLYIDSNDFSKTVAVLQKVLDQDKEVISEALLMLDKCYKNLPKSTSDWMIFLNRCVNEGAGVVAELMMSDLIEQKEGLEAAQIYVNRQLQRHPNIHLFHRLMHYHLLDAEEGRAKESLLLLMNIVAEQIRTKPSYHCRQCGFTSHSFYWRCPSCRSWDSVKSIKGFDGQ
SIO_010081: HDEF_RS00690
subclass of: SO_0000673
so part of: HDEF_RS00690
location: complement(117769..118947)
location: region:117769-118947:-1
so has part: feature:117769-118947:-1:exon

WP_012737853.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:117769-118947:-1:exon

HDEF_RS00695
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS00695
old locus tag: HDEF_0116
so part of: sequence
location: complement(118948..119265)
location: region:118948-119265:-1
so has part: feature:118948-119265:-1:exon
subclass of: SO_0000010

66260053
type: Gene
SIO_000068: ncbigene

position:118948:-1
position: 118948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:119265:-1
position: 119265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:118948-119265:-1:exon

HDEF_RS00695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS00695
old locus tag: HDEF_0116
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012737854.1
GO component: GO:0005886 - plasma membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lipopolysaccharide assembly protein LapA domain-containing protein
translation: MKFVLIFLLVCILSVILIIFGANNKEEVVFNYLLAQNSYRLSTLLVNIFLTGLFLGWIITGIFYLKARIALMKAKRKIKKLTLNKDQRVKNDANLKIIDDKKRFF
SIO_010081: HDEF_RS00695
subclass of: SO_0000673
so part of: HDEF_RS00695
location: complement(118948..119265)
location: region:118948-119265:-1
so has part: feature:118948-119265:-1:exon

WP_012737854.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:118948-119265:-1:exon

HDEF_RS00700
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: pgpB
locus tag: HDEF_RS00700
old locus tag: HDEF_0117
so part of: sequence
location: complement(119315..120052)
location: region:119315-120052:-1
so has part: feature:119315-120052:-1:exon
subclass of: SO_0000010

66260054
type: Gene
SIO_000068: ncbigene

position:119315:-1
position: 119315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:120052:-1
position: 120052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:119315-120052:-1:exon

HDEF_RS00700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: pgpB
locus tag: HDEF_RS00700
old locus tag: HDEF_0117
EC number: 3.1.3.27
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012737855.1
GO function: GO:0004609 - phosphatidylserine decarboxylase activity [Evidence IEA]
GO process: GO:0008654 - phospholipid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphatidylglycerophosphatase B
translation: MKSVMKQIIFSSMLLLIIPSSAWIFGWQWQLTHADSNLLKGLFGVTETAGYSWGILTCILLSACFLRCLRFRLKVALQFLVLLLILMVIGQTVKIIMKNQIKEPRPFLVCLEKKHHIENKNFYSLNIEPRTVLLKRLLKSETNAPNWLKKYWQAETGFSFPSGHSIFAASWALLAVGLLWPLRYYKTVIFLMLWSSGVMISRLLLGMHWPIDIFVSILISSLLSILSCWVVYRWIDPIPLNKKKF
SIO_010081: HDEF_RS00700
subclass of: SO_0000673
so part of: HDEF_RS00700
location: complement(119315..120052)
location: region:119315-120052:-1
so has part: feature:119315-120052:-1:exon

WP_012737855.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:119315-120052:-1:exon

HDEF_RS00705
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: ribA
locus tag: HDEF_RS00705
old locus tag: HDEF_0118
so part of: sequence
location: 120206..120796
location: region:120206-120796:1
so has part: feature:120206-120796:1:exon
subclass of: SO_0000010

66260055
type: Gene
SIO_000068: ncbigene

position:120206:1
position: 120206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:120796:1
position: 120796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:120206-120796:1:exon

HDEF_RS00705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: ribA
locus tag: HDEF_RS00705
old locus tag: HDEF_0118
EC number: 3.5.4.25
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002227926.1
GO function: GO:0003935 - GTP cyclohydrolase II activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GTP cyclohydrolase II
translation: MNLKRISEAKLPTPWGDFLMIGFKELDKEQDHLALVLGDISTDAPVLSRIHSECLTGDALFSLRCDCGFQLKAAFKQICEEKRGLLIYHRQEGRNIGLLNKIRAYALQDQGADTVEANHQLGFATDERDFTVCANIYKILDVKAIRLLTNNPEKIKILKKEGINVVQRVSLIVESNPNNQDYLSTKKNKMGHFFKK
SIO_010081: HDEF_RS00705
subclass of: SO_0000673
so part of: HDEF_RS00705
location: 120206..120796
location: region:120206-120796:1
so has part: feature:120206-120796:1:exon

WP_012737856.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:120206-120796:1:exon

HDEF_RS00710
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS00710
old locus tag: HDEF_0119
so part of: sequence
location: 120888..121910
location: region:120888-121910:1
so has part: feature:120888-121910:1:exon
subclass of: SO_0000010

66260056
type: Gene
SIO_000068: ncbigene

position:120888:1
position: 120888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:121910:1
position: 121910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:120888-121910:1:exon

HDEF_RS00710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS00710
old locus tag: HDEF_0119
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857326.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0003674 - molecular_function [Evidence IEA]
GO process: GO:0008150 - biological_process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TerC/Alx family metal homeostasis membrane protein
translation: MEPLTIGFPPKTLIVFVTLSVLAIFIDLFMHRNNKPISLKSACFWSLFWVGIAFVFAGFLYLSHGQELATLFITGYTLEKVLSIDNLFVIMAIFAWFAVPDNDKLRVLYWGVIGAIIFRAIFVAIGTSLLSLGPWIEFIFAGIVGWTAIMMLKDKKNQQQIEDYSQHFAYRLVKRFFPIWPRLKGSAFLLTGNEVKKELKKPENSDIKIEQFRNSALYATPLMLCLAVIELSDVIFAFDSVPAVIAVSRDPVIIYSAMVFAILGLRTLYFVLEAMKQCLIHLEKSVIALLFFIAIKLALNASEHIFHHGYHISWPTSLLIVIVVLMLGIIASFLFPKNSE
SIO_010081: HDEF_RS00710
subclass of: SO_0000673
so part of: HDEF_RS00710
location: 120888..121910
location: region:120888-121910:1
so has part: feature:120888-121910:1:exon

WP_012737857.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:120888-121910:1:exon

HDEF_RS00715
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS00715
so part of: sequence
location: 122385..122753
location: region:122385-122753:1
so has part: feature:122385-122753:1:exon
subclass of: SO_0000010

66260057
type: Gene
SIO_000068: ncbigene

position:122385:1
position: 122385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:122753:1
position: 122753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:122385-122753:1:exon

HDEF_RS00715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS00715
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDTASTYCQYAKNGRFGKSDPEEYPAPILSNMLTGLFTGLIKTAHKVSTGDLNVDVPATKENFEKVTNVFSDCMKVKHNFSEASNYRKEQARLVPHFKETKITTDKEENSFALQTRSSHGLN
SIO_010081: HDEF_RS00715
subclass of: SO_0000673
so part of: HDEF_RS00715
location: 122385..122753
location: region:122385-122753:1
so has part: feature:122385-122753:1:exon

WP_095033783.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:122385-122753:1:exon

HDEF_RS00720
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: tpx
locus tag: HDEF_RS00720
old locus tag: HDEF_0120
so part of: sequence
location: complement(123065..123574)
location: region:123065-123574:-1
so has part: feature:123065-123574:-1:exon
subclass of: SO_0000010

66260058
type: Gene
SIO_000068: ncbigene

position:123065:-1
position: 123065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:123574:-1
position: 123574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:123065-123574:-1:exon

HDEF_RS00720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: tpx
locus tag: HDEF_RS00720
old locus tag: HDEF_0120
EC number: 1.11.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857328.1
GO function: GO:0016684 - oxidoreductase activity, acting on peroxide as acceptor [Evidence IEA]; GO:0008379 - thioredoxin peroxidase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: thiol peroxidase
translation: MTQTVLFQGKETRVSGKFLEPGNKAPSFKLVGKNLSEHSLSDFAGKNKILNIFPSIDTGVCAASVRRFNESAAELRNTVVLCISADLPFAQSRFCGAENLNNVITLSAFRDNSFKHAYGVDISEGMLKGLTARAVLVLNQQDEIVYSELVSEMTTEPNYEAALDALKKL
SIO_010081: HDEF_RS00720
subclass of: SO_0000673
so part of: HDEF_RS00720
location: complement(123065..123574)
location: region:123065-123574:-1
so has part: feature:123065-123574:-1:exon

WP_012737858.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:123065-123574:-1:exon

HDEF_RS00725
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: mfd
locus tag: HDEF_RS00725
old locus tag: HDEF_0121
so part of: sequence
location: complement(123840..127292)
location: region:123840-127292:-1
so has part: feature:123840-127292:-1:exon
subclass of: SO_0000010

66260059
type: Gene
SIO_000068: ncbigene

position:123840:-1
position: 123840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:127292:-1
position: 127292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:123840-127292:-1:exon

HDEF_RS00725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: mfd
locus tag: HDEF_RS00725
old locus tag: HDEF_0121
EC number: 3.6.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011192590.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003684 - damaged DNA binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
GO process: GO:0006281 - DNA repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcription-repair coupling factor
translation: MSQKDRYKLPTAPSDVRQLGQLTGSACVLECAEIIERHLGLAILITPDRQTGLQLEYELQAFISHPISILPDWETLPYDHFSPHQSIISDRLACLYQLPSRDRGAIIIPINTFMQRICPYSFLHRHAVFLKKNQRLSLDLLRVQLDKAGYRSVHQVMEHGEFAIRGGLLDLYPMGSEEPYRIDFFDNEIESLRVFDVDTQRTLSEIEQINLLPAHEFPIDKTAIESFRSQWREQFEIRRDPEHIYQQVSKNILPAGIEYWQPLFFNEPLDTLFDYLSADVLLMNIGDIQAAAEGFWKDIHQRYEHRRIDPMRPLLAPDKLWLNVPELFSGLKAWPRIQLRTETLPNKSANTNLPYEPLPELAVQRSQKNPLMHLSDFIKRFKGIVVFSVETEGRQETLRDLLKPMEINPVLISSLDEAIQHGHYLMPGAMERGFIDTQRLRAFICESDLLGERVNRRHQDNRRIINTDVLIRNLMELRSGQPVVHLEHGVGRYLGLINLETGGIQAEYLILGYANEDKLYVPVSSLNVITRYSGSSDENAPLHKLGGDAWTKACKKTLEKVRDVAAELLGIYSQRAAKPGFSFKKDSEQYQLFCESFPFETTPDQEQAIHAVLNDMSQPLAMDRLVCGDVGFGKTEVAMRAAFLAVINHKQVAVLVPTTLLAQQHFDNFRDRFAHWPIQIEMLSRFRTAKEQKQILQQVAEGKLDILIGTHKLLKNDLCWKDLGLLIVDEEHRFGVRHKERIKAIRTDVDILTLTATPIPRTLNMAMSGMRDLSIIATPPARRLSVKTFVREYDSFLIKEAILREILRGGQVYYLYNEVETIEKTYETLKKLVPEARITLAHGQMRERDLERVMNDFHHQRFNLLVCTTIIETGIDIANANTIIIEKANHFGLAQLHQLRGRVGRSHHQAYAYLLTPPPKAITNDAKKRLEVITSLEDLGSGFALATHDLEIRGAGELLGENQSGQINAVGFSLYMEMLENAVEAFKKGKDPSLEAFIRPQSEIEMHLPTLLPENFIPDVNIRLSFYKRIANANNHVELNELKIELIDRFGLLPDEVQYLLKTAYFRQKSEKLGIKRIESHEKGGFLTFRDDHQVNPAYLIGLLQKNSTIYRLEGSSKLKFILDLKNKNERLKFIEDLLSSLEDHRLITA
SIO_010081: HDEF_RS00725
subclass of: SO_0000673
so part of: HDEF_RS00725
location: complement(123840..127292)
location: region:123840-127292:-1
so has part: feature:123840-127292:-1:exon

WP_044612425.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:123840-127292:-1:exon

HDEF_RS00730
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: lolC
locus tag: HDEF_RS00730
old locus tag: HDEF_0122
so part of: sequence
location: 127457..128659
location: region:127457-128659:1
so has part: feature:127457-128659:1:exon
subclass of: SO_0000010

66260060
type: Gene
SIO_000068: ncbigene

position:127457:1
position: 127457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:128659:1
position: 128659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:127457-128659:1:exon

HDEF_RS00730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: lolC
locus tag: HDEF_RS00730
old locus tag: HDEF_0122
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019083396.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0042953 - lipoprotein transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lipoprotein-releasing ABC transporter permease subunit LolC
translation: MYQPVTLFIGLRYIYGRRSDRFGRLVSSLSSIGIMLGVMSMIVVLSVMNGFERDLQNNVLGLMPHALITTPENVIDPQKIPASKLQNLKGIKHIAPITTSDVVIQSAQNISAGVMLGINPEQYEPLSKYFINVHQNLLQAGQYRIIMGAKLAQQLGIQSGDTVRLIVPSVRQLTPMGGMLSQRLFTLVGVFSANSEVDADQFFVNQQDASRLMRYPLGDITGWRLFLTQPLKVASLSKQKLPDGTVWKDWRERKGALFQAMQMEKNMMGLLLSLIIIVAAFNIMTSLGLLVMDKQREVAILQTQGFTRRQIMAMFIVQGSTSGIVGSVLGALLGIILTGQLEKLLPILGLLIAGESLPVSIDPMQVFIISLSAIFMALLSTLYPSWRAANFQPAEALRYE
SIO_010081: HDEF_RS00730
subclass of: SO_0000673
so part of: HDEF_RS00730
location: 127457..128659
location: region:127457-128659:1
so has part: feature:127457-128659:1:exon

WP_012737860.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:127457-128659:1:exon

HDEF_RS00735
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: lolD
locus tag: HDEF_RS00735
old locus tag: HDEF_0123
so part of: sequence
location: 128652..129362
location: region:128652-129362:1
so has part: feature:128652-129362:1:exon
subclass of: SO_0000010

66260061
type: Gene
SIO_000068: ncbigene

position:128652:1
position: 128652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:129362:1
position: 129362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:128652-129362:1:exon

HDEF_RS00735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: lolD
locus tag: HDEF_RS00735
old locus tag: HDEF_0123
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006316762.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0005524 - ATP binding [Evidence IEA]
GO process: GO:0042953 - lipoprotein transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lipoprotein-releasing ABC transporter ATP-binding protein LolD
translation: MNKNAPPLLHCEKLCKTYREGKLHANVLKNITFTLQAGQMMAIVGSSGSGKSTLLHLLGGLDSPSSGEIFFQGNLINHLSTSKKAKLRNRHLGFIYQFHHLLPDFTALENVSMPLLIAGEKARTAKQKALKMLELVGLDNRHQHRPSQLSGGERQRVAIARALVNTPSLVLADEPTGNLDQQNAEAVFNLLSQININQGTTFLVVTHDLKYAKRLNQQLEMTDGHLHPILSLSEAR
SIO_010081: HDEF_RS00735
subclass of: SO_0000673
so part of: HDEF_RS00735
location: 128652..129362
location: region:128652-129362:1
so has part: feature:128652-129362:1:exon

WP_012737861.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:128652-129362:1:exon

HDEF_RS00740
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: lolE
locus tag: HDEF_RS00740
old locus tag: HDEF_0124
so part of: sequence
location: 129365..130618
location: region:129365-130618:1
so has part: feature:129365-130618:1:exon
subclass of: SO_0000010

66260062
type: Gene
SIO_000068: ncbigene

position:129365:1
position: 129365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:130618:1
position: 130618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:129365-130618:1:exon

HDEF_RS00740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: lolE
locus tag: HDEF_RS00740
old locus tag: HDEF_0124
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857262.1
GO process: GO:0042953 - lipoprotein transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lipoprotein-releasing ABC transporter permease subunit LolE
translation: MTFLFARAWLIAWRFNRDRRKGGMVSLLSLISIFSIALGVAVLIISLSTMNGFERELKNRVLAVVPHGQIHFLDLSIYDWPLILNRVEKIKGIISAAPYIDFTGLIENETKIRAVQINGVSLKREHSISALPDFVLNHAWQKFKASQKQIILGQGLANTLGVKVGSWLTILIPNINTQIRLLKPKRIHLQVIGVFQLSGQLDHNLAIIPLSDAQQYLEMGDKISGIKIKIKDIFNADHITHKAAQATKSDVNFSSWISTYGYMYHDIQMIRSIMYIAMVLVMSVSSFNIVSTLIMVVKDKKNDIAILRTLGAQDKLIQTIFIFYGLWTGLIGSISGVFLGVLLSLKLTEIMHLLEKWMGYSFLSGDIYFINFFPVELHWFDVFYVFMTSLLLSLMASWYPARRASKLDPAKVLSGTH
SIO_010081: HDEF_RS00740
subclass of: SO_0000673
so part of: HDEF_RS00740
location: 129365..130618
location: region:129365-130618:1
so has part: feature:129365-130618:1:exon

WP_012737862.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:129365-130618:1:exon

HDEF_RS00745
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS00745
old locus tag: HDEF_0125
so part of: sequence
location: complement(130779..131825)
location: region:130779-131825:-1
so has part: feature:130779-131825:-1:exon
subclass of: SO_0000010

66260063
type: Gene
SIO_000068: ncbigene

position:130779:-1
position: 130779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:131825:-1
position: 131825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:130779-131825:-1:exon

HDEF_RS00745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS00745
old locus tag: HDEF_0125
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857261.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YscQ/HrcQ family type III secretion apparatus protein
translation: MLLQVLPEFKALSALVGNGRKKEEVTVNMRVMEGPGIYFSVMLNELPCGLWLSEQQWSSWLESIISVASPDCLHPDLLMGISDWTLSYLPNLFPKMTLGHDIPRPASLIKQWAVVCNYNINQQEFGFVLLNWSAHFLLETLADWHSVDKEKEFYDKNNDKLQYECGLVAGWCRLSVSQLKHIQVEDGLRLLACAELDQSCCWMWPEQGSQFYISLNEGKTVTIKDINDNIDTFLELDSDTESNDFSYKAPSDEDAPDASSPDVIPEFEEEPKKISLNEFTQTLVMEIGRINIPIQDLNQLFVGKTLNCKTSFYGEVMIRLNGRKIGSGNLLNCDGELIVRIEQWLLDK
SIO_010081: HDEF_RS00745
subclass of: SO_0000673
so part of: HDEF_RS00745
location: complement(130779..131825)
location: region:130779-131825:-1
so has part: feature:130779-131825:-1:exon

WP_044612220.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:130779-131825:-1:exon

HDEF_RS00750
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS00750
old locus tag: HDEF_0126
so part of: sequence
location: complement(131803..132201)
location: region:131803-132201:-1
so has part: feature:131803-132201:-1:exon
subclass of: SO_0000010

66260064
type: Gene
SIO_000068: ncbigene

position:131803:-1
position: 131803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:132201:-1
position: 132201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:131803-132201:-1:exon

HDEF_RS00750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS00750
old locus tag: HDEF_0126
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857260.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNRIHIEGAIPLPPPEKARRQSKDGQDHEQKKKHFQHLLQPPSPSTQLKEDLNPSLSPLREKWADYHIVSGVLTGTVIRVSFAQKGFVVRLTCPGDIIKKRVLGLSKRWERELVRIGIPCFLEVSDATTSPP
SIO_010081: HDEF_RS00750
subclass of: SO_0000673
so part of: HDEF_RS00750
location: complement(131803..132201)
location: region:131803-132201:-1
so has part: feature:131803-132201:-1:exon

WP_012737864.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:131803-132201:-1:exon

HDEF_RS00755
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS00755
old locus tag: HDEF_0127
so part of: sequence
location: complement(132182..132613)
location: region:132182-132613:-1
so has part: feature:132182-132613:-1:exon
subclass of: SO_0000010

66260065
type: Gene
SIO_000068: ncbigene

position:132182:-1
position: 132182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:132613:-1
position: 132613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:132182-132613:-1:exon

HDEF_RS00755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS00755
old locus tag: HDEF_0127
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857259.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type III secretion system apparatus protein
translation: MGIRKNIKNARTNSDLVTLVRLLNLKKNREQTLRRCISGSIKTQENLKWQTEGCRIKREQICEQLKKLTHWQGVLEANEFAEHKELFHSFYEQEREQLSKRNEFLMQLKQVEKKLQELQLLLKLNLIKQEKLRILIKDESNSY
SIO_010081: HDEF_RS00755
subclass of: SO_0000673
so part of: HDEF_RS00755
location: complement(132182..132613)
location: region:132182-132613:-1
so has part: feature:132182-132613:-1:exon

WP_048901542.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:132182-132613:-1:exon

HDEF_RS00760
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS00760
old locus tag: HDEF_0128
so part of: sequence
location: complement(132562..133887)
location: region:132562-133887:-1
so has part: feature:132562-133887:-1:exon
subclass of: SO_0000010

66260066
type: Gene
SIO_000068: ncbigene

position:132562:-1
position: 132562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:133887:-1
position: 133887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:132562-133887:-1:exon

HDEF_RS00760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS00760
old locus tag: HDEF_0128
EC number: 7.1.2.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857258.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: EscN/YscN/HrcN family type III secretion system ATPase
translation: MHLPDVSPVSERLKKKLAFTIPVPSGAVYRGPILDVGRTLIKVSLPGVRMGELCRIEPNRILAEVVSIEQKTALLSPFSSCDGLYAGQWVSPLKYSHQVPVSMSLMGRILNGLGHPIDDGPGLGYHWRSLDNAPPDPLKRKPITDQLVTGIRSLDAILSCGEGQRIGIFAAAGVGKSTLLGMLCDGSDADVMVLALIGERGREVREFLEQVLTPKARQRTVVVVATSDRPALERLKGIYTATTIAEYFRDCGKKVVLMVDSLTRYARAAREIGLAAGEPPAAGSFPPSVFAQMPRLLERTGNSDLGSITAFYTVLVEGDDMNEPVADEVRSLLDGHIILSRKLAGAGHYPAIDIAASVSRIMPQIASSWHLEMAQKLRFILARYEEIELLVRVGEYQKGQDLEADDALKRYPAVCNFLKQKGGEHWALEKTLKMLEQTVIS
SIO_010081: HDEF_RS00760
subclass of: SO_0000673
so part of: HDEF_RS00760
location: complement(132562..133887)
location: region:132562-133887:-1
so has part: feature:132562-133887:-1:exon

WP_044612426.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:132562-133887:-1:exon

HDEF_RS00765
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS00765
old locus tag: HDEF_0129
so part of: sequence
location: complement(133889..135937)
location: region:133889-135937:-1
so has part: feature:133889-135937:-1:exon
subclass of: SO_0000010

66260067
type: Gene
SIO_000068: ncbigene

position:133889:-1
position: 133889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:135937:-1
position: 135937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133889-135937:-1:exon

HDEF_RS00765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS00765
old locus tag: HDEF_0129
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857257.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: EscV/YscV/HrcV family type III secretion system export apparatus protein
translation: MVMRGDKIKKALALLLERQDIFLAVMLLVAIFMMILPLPTELIDVLIAVNLGLSAILLMISIYIRDPLEFSVFPSLLLITTLYRLALTISTSRLVLLQHDAGEIVEAFGQFVVGGNLTVGLIIFSIITVVQFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDLRSGSIDSAEAGRQRERVQKESRLFGAMDGAMKFVKGDAIASIIVILVNIIGGISVGVFQHQMSASEALQTYAVLSVGDGLASQIPSLLISITAGIVVTRVPGKERKSLANELANQVGRQPEALWMAGGILLVFALIPGFPFFVFALLASLVASPAFLVYRKKKKLGQSESMGLNADGEPQNEMKPGAVPLLLHCAPNLNRSNLKTEIDSLRLRLFEHLGLPVPEVVVHINQQLEKNGLSISVYQERVLELVLAENELLIERPHAELTVRHQNLSRRMGELYWISSDQKSQAISLKITFFEGDERIIQCLNYVFERHSSEFIGVQETRYLMDAMEKNYAELIKELQRQMPVNKISNILQKLVQENISIRDLRTIFGAIVEWAPKEKDNVMLTEYVRIALRRHICQRFSHSKNYLTVFRVGEGLENIIRRSIRQTSAGAYSELNAKKSTLILNKIKKSIENKTDILLLTSIDVRHYLRKMIEHDLFSLPVLSFQEIGDEMPIKVEGMVEFIGEELNEFE
SIO_010081: HDEF_RS00765
subclass of: SO_0000673
so part of: HDEF_RS00765
location: complement(133889..135937)
location: region:133889-135937:-1
so has part: feature:133889-135937:-1:exon

WP_012737867.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:133889-135937:-1:exon

HDEF_RS00770
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS00770
old locus tag: HDEF_0130
so part of: sequence
location: complement(135928..136299)
location: region:135928-136299:-1
so has part: feature:135928-136299:-1:exon
subclass of: SO_0000010

66260068
type: Gene
SIO_000068: ncbigene

position:135928:-1
position: 135928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:136299:-1
position: 136299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:135928-136299:-1:exon

HDEF_RS00770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS00770
old locus tag: HDEF_0130
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857256.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type III secretion system apparatus protein
translation: MDINLVVTRNLQLFVRLAQLPCESIESCMEWRIGQRVVFLEVRQQRVLLTTGRLQEYANNTQLFDLQKRWRLERFQGIPQRIYLLNAGVMVSCCFDFSSRAELWYQIYLQQYVLLRSLPGTWS
SIO_010081: HDEF_RS00770
subclass of: SO_0000673
so part of: HDEF_RS00770
location: complement(135928..136299)
location: region:135928-136299:-1
so has part: feature:135928-136299:-1:exon

WP_012737868.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:135928-136299:-1:exon

HDEF_RS00775
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS00775
old locus tag: HDEF_0131
so part of: sequence
location: complement(136310..137302)
location: region:136310-137302:-1
so has part: feature:136310-137302:-1:exon
subclass of: SO_0000010

66260069
type: Gene
SIO_000068: ncbigene

position:136310:-1
position: 136310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:137302:-1
position: 137302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:136310-137302:-1:exon

HDEF_RS00775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS00775
old locus tag: HDEF_0131
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857255.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SepL/TyeA/HrpJ family type III secretion system protein
translation: MSTINSHHSLLINDIDHRQSAESEKKTTIAHQISPGSSVMEAIFEQQVQLSSQTETIEMMGLKIGEYYKQLKNTRSERSKNLLLQFIESQGKDGFNDLLKKNLSHHANSDLLLAQQILQTGFLLTQQGHNPLRRRQLSKQLADLMEQEGWEISLFGLLEFNDMPTENFSRLRRLFQQVIDDEEYSVINFFEKIKEWADRKRRIRVLLRAMAFELNSQPAPEKGRRLKIMIDRLKRLLLFLSLDERCEVMASCYGLEGDVLLSQILEITAQSWVFKDWLEERLDDAFNLENLQKRELIFDLTRLFKIMPDGCFTDDDHREQILEAFSSFEC
SIO_010081: HDEF_RS00775
subclass of: SO_0000673
so part of: HDEF_RS00775
location: complement(136310..137302)
location: region:136310-137302:-1
so has part: feature:136310-137302:-1:exon

WP_012737869.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:136310-137302:-1:exon

HDEF_RS00780
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS00780
old locus tag: HDEF_0132
so part of: sequence
location: complement(137299..137937)
location: region:137299-137937:-1
so has part: feature:137299-137937:-1:exon
subclass of: SO_0000010

66260070
type: Gene
SIO_000068: ncbigene

position:137299:-1
position: 137299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:137937:-1
position: 137937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:137299-137937:-1:exon

HDEF_RS00780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS00780
old locus tag: HDEF_0132
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006705807.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type III secretion protein
translation: MSNPFHISIKEYNSSLPIGPYIPSEFLKKIDWKETIEEQAHKKARAILQHAEEEKTAILREAQLEAEKIKQKQQDKLEASLLERHVKWLLENKKIEDILVESVRQNIIQAITTVIRSWAGQQSIDEILVARLADKVEKLAKQGSLTLRVHPKRLSPVLHETFAHRLLLSEDETLDVNQAILASPLLSVDICLDRHLSELIIWIEAASEGIAS
SIO_010081: HDEF_RS00780
subclass of: SO_0000673
so part of: HDEF_RS00780
location: complement(137299..137937)
location: region:137299-137937:-1
so has part: feature:137299-137937:-1:exon

WP_012737870.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:137299-137937:-1:exon

HDEF_RS00785
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS00785
old locus tag: HDEF_0133
so part of: sequence
location: complement(137934..138563)
location: region:137934-138563:-1
so has part: feature:137934-138563:-1:exon
subclass of: SO_0000010

66260071
type: Gene
SIO_000068: ncbigene

position:137934:-1
position: 137934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:138563:-1
position: 138563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:137934-138563:-1:exon

HDEF_RS00785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS00785
old locus tag: HDEF_0133
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857254.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type III secretion system domain-containing protein
translation: MKDQNEPVYPNFDQKCGGIKTISSQLLHLHQLAWQPARFAHPLWLTKAGLKAQSYCYGNSPALDAALNRYLIHVRNFPLEPLPAVLTDQQKSDLLLESRLKKLCMALGLISLKCVEYLRIAHYRQAFHPTLNETDMRQLLGIGCPSQSAISLTPDLLPKIARQLGYGIFHSIESGNLIWRAFSILLPPLPRAIHFPQARLWLGRLERLL
SIO_010081: HDEF_RS00785
subclass of: SO_0000673
so part of: HDEF_RS00785
location: complement(137934..138563)
location: region:137934-138563:-1
so has part: feature:137934-138563:-1:exon

WP_012737871.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:137934-138563:-1:exon

HDEF_RS00790
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: ssaJ
locus tag: HDEF_RS00790
old locus tag: HDEF_0134
so part of: sequence
location: complement(138560..139309)
location: region:138560-139309:-1
so has part: feature:138560-139309:-1:exon
subclass of: SO_0000010

66260072
type: Gene
SIO_000068: ncbigene

position:138560:-1
position: 138560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:139309:-1
position: 139309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:138560-139309:-1:exon

HDEF_RS00790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: ssaJ
locus tag: HDEF_RS00790
old locus tag: HDEF_0134
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002209042.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: EscJ/YscJ/HrcJ family type III secretion inner membrane ring protein SsaJ
translation: MRSVRRIFYIFLIILSLSACNVQLYSGLAQSEANQMLALLMLHHINAEKQQNKDGTVTVNVDRKHFIDAVELLRQNGFPRRNYVTVDKIFPSNQLVTSPGQEQAKMVYIKEQQLESMLSHMEGVIRVDVSIAVAAPSNDKNMNPSSASVFMKYSPEINLEIYQSQIKNLIHDAIPGIDYSKISILMQPANFRFTPKKITEADNLQKQEQSHSALEWLLEHIKVIQMILAGLAGVVAVLSVVGWIRYLRK
SIO_010081: HDEF_RS00790
subclass of: SO_0000673
so part of: HDEF_RS00790
location: complement(138560..139309)
location: region:138560-139309:-1
so has part: feature:138560-139309:-1:exon

WP_012737872.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:138560-139309:-1:exon

HDEF_RS00795
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: sctI
locus tag: HDEF_RS00795
old locus tag: HDEF_0135
so part of: sequence
location: complement(139306..139560)
location: region:139306-139560:-1
so has part: feature:139306-139560:-1:exon
subclass of: SO_0000010

66260073
type: Gene
SIO_000068: ncbigene

position:139306:-1
position: 139306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:139560:-1
position: 139560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:139306-139560:-1:exon

HDEF_RS00795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: sctI
locus tag: HDEF_RS00795
old locus tag: HDEF_0135
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857252.1
GO component: GO:0030257 - type III protein secretion system complex [Evidence IEA]
GO process: GO:0030254 - protein secretion by the type III secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type III secretion system inner rod subunit SctI
translation: MTTEPIIALTEHLQNVQKDKKAQGTPEQINRFFDLLYNKKPVTDTPQDALGIQYGVARATVKIDLDAKIAGVLGQGINKLVSMQ
SIO_010081: HDEF_RS00795
subclass of: SO_0000673
so part of: HDEF_RS00795
location: complement(139306..139560)
location: region:139306-139560:-1
so has part: feature:139306-139560:-1:exon

WP_012737873.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:139306-139560:-1:exon

HDEF_RS00800
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS00800
old locus tag: HDEF_0136
so part of: sequence
location: complement(139611..139871)
location: region:139611-139871:-1
so has part: feature:139611-139871:-1:exon
subclass of: SO_0000010

66260074
type: Gene
SIO_000068: ncbigene

position:139611:-1
position: 139611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:139871:-1
position: 139871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:139611-139871:-1:exon

HDEF_RS00800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS00800
old locus tag: HDEF_0136
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857251.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: EscG/YscG/SsaH family type III secretion system needle protein co-chaperone
translation: MTILSKSCRQLIVEAAIAGLNHNFCKESRAIMESLPFLVPDINVRLTCHALLLHGLGETQKAINLLKDSSLEEAIVLREIFLNVET
SIO_010081: HDEF_RS00800
subclass of: SO_0000673
so part of: HDEF_RS00800
location: complement(139611..139871)
location: region:139611-139871:-1
so has part: feature:139611-139871:-1:exon

WP_012737874.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:139611-139871:-1:exon

HDEF_RS00805
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: sctF
locus tag: HDEF_RS00805
old locus tag: HDEF_0137
so part of: sequence
location: complement(139868..140083)
location: region:139868-140083:-1
so has part: feature:139868-140083:-1:exon
subclass of: SO_0000010

66260075
type: Gene
SIO_000068: ncbigene

position:139868:-1
position: 139868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:140083:-1
position: 140083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:139868-140083:-1:exon

HDEF_RS00805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: sctF
locus tag: HDEF_RS00805
old locus tag: HDEF_0137
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012737875.1
GO process: GO:0030254 - protein secretion by the type III secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type III secretion system needle filament subunit SctF
translation: MNIESLINALSDKMSKVSQDLKAKVSSTDLNNPGHMVKMQYSIQQYSNLVSIQSSLVRVFKDLFSSIISKI
SIO_010081: HDEF_RS00805
subclass of: SO_0000673
so part of: HDEF_RS00805
location: complement(139868..140083)
location: region:139868-140083:-1
so has part: feature:139868-140083:-1:exon

WP_012737875.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:139868-140083:-1:exon

HDEF_RS00810
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS00810
old locus tag: HDEF_0138
so part of: sequence
location: complement(140099..140797)
location: region:140099-140797:-1
so has part: feature:140099-140797:-1:exon
subclass of: SO_0000010

66260076
type: Gene
SIO_000068: ncbigene

position:140099:-1
position: 140099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:140797:-1
position: 140797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:140099-140797:-1:exon

HDEF_RS00810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS00810
old locus tag: HDEF_0138
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012737876.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MQSIQFILFLKAGSLKCSGEYYDVPSGSLVVSDESAVASTVDGYHLKNIICYSADLLPIYKTLTQHSSQSNSFQRFAFDRCKILSLQKNIIQVTERLMSIQPGMSLRFIYLYCLGLDSEYFYNLLNLMVGNSNELLEFFEQNSLNAWSVSRYAEELGVSSRKLNFLFYQKFGTSVKQWLLDKRLKKGLELLKSTRLRVSDIAMECGFSNHAHFSDSFRRRYQHSPSQLRTLI
SIO_010081: HDEF_RS00810
subclass of: SO_0000673
so part of: HDEF_RS00810
location: complement(140099..140797)
location: region:140099-140797:-1
so has part: feature:140099-140797:-1:exon

WP_012737876.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:140099-140797:-1:exon

HDEF_RS00815
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS00815
old locus tag: HDEF_0139
so part of: sequence
location: 141173..143374
location: region:141173-143374:1
so has part: feature:141173-143374:1:exon
subclass of: SO_0000010

66260077
type: Gene
SIO_000068: ncbigene

position:141173:1
position: 141173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:143374:1
position: 143374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:141173-143374:1:exon

HDEF_RS00815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS00815
old locus tag: HDEF_0139
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPKSTVSNMNLKFFTFLKSQDSSKQKGASAISKKRLTAKNTDKGIFSQNKADQVKLNGEPQSKTDKSRLSLDFALIQVTLFKKLNKYINDLDVNDEHRTVRQNNVKDRFKDFLIITDSNKVAWSQHKQPKDLSELKKIIGETLESCSFFKSSLRTILNTVNEQIKVAESNLTSYTYTKNSRDSNDAEKTPEVPAFSTDTITQDTTQNTISIISPATQENKLVSSEDNQNNTPDSQSDDSTNNNLFNDVDDNVNHNLVTQPAENPLHEETIVKEHDQLLRILNEYANTSTKSPIKKLSHGGSHLKILEDILGNNWIKIEKNNFEEKIKWKKNPDINDICFIVNALLEKHPKKESQLNQLLVHFQSEFSKRHPELNINSDRLLQVLNQYGKDKDHQEKLHKKLDEYNDVLKKTKDTQNPYKWNEEPTEEKIDAILKKLLENSMDHESSLRKLLAQRFPEKTTAIITDITDVKTKEIFKKHKKILQEEISKVDTDHLNSFGKLEKFSKKIDQVQEDRVKEFNKEIKGFSDKTKITINDSLKKNYESKLKNCEQTLSFPDIVDKILDKKDYFIFNSTKKINKEEIEKNGNKINEKVIQISNLDIPKEVKKECINKITSMALKRLDLINNSLPREETFWKSFSAAMTSTFTRTGVVAGIGTTVILLLASIGAVPAVIIGGAIVGFIVFGNVLKELKNSSKKQEKLQEVIQSYSSEREKIKEIQKKHGISIHQAESKAN
SIO_010081: HDEF_RS00815
subclass of: SO_0000673
so part of: HDEF_RS00815
location: 141173..143374
location: region:141173-143374:1
so has part: feature:141173-143374:1:exon

WP_012737877.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:141173-143374:1:exon

HDEF_RS00820
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS00820
old locus tag: HDEF_0140
so part of: sequence
location: complement(143618..143893)
location: region:143618-143893:-1
so has part: feature:143618-143893:-1:exon
subclass of: SO_0000010

66260078
type: Gene
SIO_000068: ncbigene

position:143618:-1
position: 143618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:143893:-1
position: 143893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:143618-143893:-1:exon

HDEF_RS00820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS00820
old locus tag: HDEF_0140
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857247.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKTLAFIIAVTISSTAIAAEGSMLKQPNPTEVTSKVASSAVTSSTADSAGNIKKTKIEKYHKKTEKKRMKKDSKNKPDANMKKESNFNMK
SIO_010081: HDEF_RS00820
subclass of: SO_0000673
so part of: HDEF_RS00820
location: complement(143618..143893)
location: region:143618-143893:-1
so has part: feature:143618-143893:-1:exon

WP_012737878.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:143618-143893:-1:exon

HDEF_RS00825
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS00825
old locus tag: HDEF_0141
so part of: sequence
location: complement(144048..145004)
location: region:144048-145004:-1
so has part: feature:144048-145004:-1:exon
subclass of: SO_0000010

66260079
type: Gene
SIO_000068: ncbigene

position:144048:-1
position: 144048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:145004:-1
position: 145004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:144048-145004:-1:exon

HDEF_RS00825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS00825
old locus tag: HDEF_0141
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857246.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MNYNTGLTQTTSNFFSVNPEKASPTFENDQSDKSKLKEERPGFSSVILKTIEEELKVNGKKVKPDPELIKITKKMEEELNSIPSATIEGKNKSQINDKDIEPMAKICLKYAFPIVKILEKSEISNNPKNGIILDNLDTISKRVHDIANGPSDNMELVMLQLMIMIMLVALETLKKNCMDLELKDKSQMRRCELMLASADEKAKGGYIDSGCKIFGGLLGAVCSSYGMAKGNELGSIAGHASSGVSGLGGIASQNDYKQSNYDNAFAQNATDMVQSADTMFQNNQKIVIDLLTTLLQFMKEMMPLLSRLLHGGSFVAGG
SIO_010081: HDEF_RS00825
subclass of: SO_0000673
so part of: HDEF_RS00825
location: complement(144048..145004)
location: region:144048-145004:-1
so has part: feature:144048-145004:-1:exon

WP_012737879.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:144048-145004:-1:exon

HDEF_RS00830
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS00830
old locus tag: HDEF_0142
so part of: sequence
location: complement(145050..147038)
location: region:145050-147038:-1
so has part: feature:145050-147038:-1:exon
subclass of: SO_0000010

66260080
type: Gene
SIO_000068: ncbigene

position:145050:-1
position: 145050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:147038:-1
position: 147038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:145050-147038:-1:exon

HDEF_RS00830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS00830
old locus tag: HDEF_0142
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857245.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type III secretion system protein
translation: MVAEIDVNQTKYHGFQKQKEVGTLTSFIDKKKEEKTQEQELKKILKQLKQRFVNFNLKSENLILILKNHTSQTEAVNSLEKQLKNQSLAPHERQEIISNLLPHIKNFFNHSNTKNDKAISQRSAIKKSSIELKDKIPTALDAIKGANHLLDSISDFCNLSHVSDLMGASPEKAKEAIKMTLYQLHSLGKDLDSFSSNKDLVNLFSRLKTLHSNLLLLQNTPDFSVNNNHDAYLNFGNNIINNNLSFQNIMIAVFLHYQQVVINNMSSQNQQDRDNLKHQKLLIDYEHQKLVDMIHQQQEQIKKNEERSWWDKLIDVIVNVVQVIIGVVEVCIGDEVSGAANILAGACGLAKDLCQILEACHIGNKEAEDKAIEVLTGLSTFFQFVALMTDMFSVLYKPAKLLKEGAVKLIRKGGSDALADAAKVGSSRLAEAAAEGMEKKGIKLLEERMEKQLGKEAEEFIENLSERFNFNPEEGGIELKNMASGEGEEAEFAFEDINAKPKNIQKNIDRATEFFEKSKKQIINRIKQNVMKAAKQAAKDGEEITQEAINQIILMSVSKEIEKTAFRSFRFAGYRAAQAFVEASKLTFDGIIEWQVTGLTYEQEKDAAEREISKNEVDNTKKRTELNQKNQQNEVKFLQAEQQETIKSLQQVGQLNDLIMGG
SIO_010081: HDEF_RS00830
subclass of: SO_0000673
so part of: HDEF_RS00830
location: complement(145050..147038)
location: region:145050-147038:-1
so has part: feature:145050-147038:-1:exon

WP_086934964.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:145050-147038:-1:exon

HDEF_RS00835
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS00835
old locus tag: HDEF_0144
so part of: sequence
location: complement(147129..148382)
location: region:147129-148382:-1
so has part: feature:147129-148382:-1:exon
subclass of: SO_0000010

66260081
type: Gene
SIO_000068: ncbigene

position:147129:-1
position: 147129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:148382:-1
position: 148382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147129-148382:-1:exon

HDEF_RS00835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS00835
old locus tag: HDEF_0144
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857244.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MNMQVMPDLVNLVNENKAFYAENSDKTIPAKGATEGIQKLTKNQMGRLENILKQLIHSVEHEPVDVGNKLQELLTLAKENISNKDDFKKYINDFKQFINQHKEAKANKEAKAKAKADANIKLVALAVEHFLKEVDPKRINKNMLLFEKQLHEIALSGHLSEIQHKEIREQARKLHNKHISPTRNKRSVFNEPDLSDDSDDNRQDFNHKDISSIPIRNKRSISNEPAPGPDPYDNPNDVEGRTLLSMLSSALHDPNISMWMLMILLSMCEYNASASGALHIAENQKKALERQQAAQELSNRVNELVDEIPPSDATKKEDFTKELIEKAEALGLQVDGKNIVEYLKNQTSDGKGGYQISRDCLDAIKGASDQIVSVATQVSSEAQIKVSQQNNTASNWMNLAKTMVSALGQLCRTIMSS
SIO_010081: HDEF_RS00835
subclass of: SO_0000673
so part of: HDEF_RS00835
location: complement(147129..148382)
location: region:147129-148382:-1
so has part: feature:147129-148382:-1:exon

WP_044612221.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:147129-148382:-1:exon

HDEF_RS00840
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS00840
old locus tag: HDEF_0145
so part of: sequence
location: complement(148535..148789)
location: region:148535-148789:-1
so has part: feature:148535-148789:-1:exon
subclass of: SO_0000010

66260082
type: Gene
SIO_000068: ncbigene

position:148535:-1
position: 148535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:148789:-1
position: 148789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:148535-148789:-1:exon

HDEF_RS00840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS00840
old locus tag: HDEF_0145
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012737883.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: EscE/YscE/SsaE family type III secretion system needle protein co-chaperone
translation: MATITYLEDSLKNCPEQLQSKLDELDEAEVTLKSALSSPKTPEEYEGLQKLYDSVLSARKIIKTLSYRYHKKKPENLFDHDQFS
SIO_010081: HDEF_RS00840
subclass of: SO_0000673
so part of: HDEF_RS00840
location: complement(148535..148789)
location: region:148535-148789:-1
so has part: feature:148535-148789:-1:exon

WP_012737883.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:148535-148789:-1:exon

HDEF_RS00845
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: sctD
locus tag: HDEF_RS00845
old locus tag: HDEF_0146
so part of: sequence
location: complement(148820..150058)
location: region:148820-150058:-1
so has part: feature:148820-150058:-1:exon
subclass of: SO_0000010

66260083
type: Gene
SIO_000068: ncbigene

position:148820:-1
position: 148820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:150058:-1
position: 150058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:148820-150058:-1:exon

HDEF_RS00845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: sctD
locus tag: HDEF_RS00845
old locus tag: HDEF_0146
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857552.1
GO process: GO:0030254 - protein secretion by the type III secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type III secretion system inner membrane ring subunit SctD
translation: MKAQFKVRLLNGILNGREILLPEGIFTFGEQDCDIFLVLPDAHILTLKIEENEIFMEAQCQVWVNGVAFDLNHPLPLHQVIEADGIYMLLGAHDDTLTAMPLPRRVDQRPSLWLSVLALILLFTFLGGVYWLSSNKNRLLKHSEKKMIEYQSTNIASQLAKKLNTLKLKEVKTIWQPDGSVILNGYCQNSDLIKNVQNFLLANEIAYHNNLICDDHLMLSVKNVFLQFGYPDVEVKQGSLPNTLVIHGLIQSGPEWAKVQEALSSIAGLKGWSVVNNQGEQIKFLIQQLMESDLLGYLSMEQNKQNIVMSGWLSSEQQKKLNEMLDNIHQKDPTFPKVIYQNIPVFDQSAQILPSPVMSYGGNIKSVFIDLENGQRLQVGTVLSNGYKVIFIGKQGIQLIKGNDMIHIPLNF
SIO_010081: HDEF_RS00845
subclass of: SO_0000673
so part of: HDEF_RS00845
location: complement(148820..150058)
location: region:148820-150058:-1
so has part: feature:148820-150058:-1:exon

WP_012737884.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:148820-150058:-1:exon

HDEF_RS00850
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS00850
old locus tag: HDEF_0147
so part of: sequence
location: complement(150062..151552)
location: region:150062-151552:-1
so has part: feature:150062-151552:-1:exon
subclass of: SO_0000010

66260084
type: Gene
SIO_000068: ncbigene

position:150062:-1
position: 150062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:151552:-1
position: 151552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:150062-151552:-1:exon

HDEF_RS00850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS00850
old locus tag: HDEF_0147
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857551.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: EscC/YscC/HrcC family type III secretion system outer membrane ring protein
translation: MKKIISLFICFLLSNPFLKAQTIHWQGAPFFIYTHGISLGKLLKEIGLNYGIPVIVSPDITDTFSGELKDKTPNQMLDELSTRYNLTWYFDGDVIYFYKIQDIKKQILSSGDLPIKALIKYLKNSGLPNGKNCALKALTRLNTVEISGVPVCIERATQLTSLLNTQRQNYNDNKQAVRVFSLKYASATDTTYQYRDQKVTLPGLVSVLRDMNSQNTIAIGENKTSGKDQSLGLPLFSADPRQNALIVRDRVVNMPIYASLVKQLDVRPIEIEISVAIIDVDASDINQLGINWEASASLGGGKVSFNKGFISSDDGGFSTVVGNDFMVRINALEQHSKARVLSRPSIVTLNNIQAVLDKNVTFYTKLQGDKVAKLDSRTTGTLMQVTPRMIKDKGKEDVLLNLDIQDGQQRPSINNTTEILPQIDNSQITTQAVLKPGQNLLLGGFIQDSQKASKHKIPLLGDIPLIGGLFRSSSKQSSSVVRLFLIKAVPVKNKRQ
SIO_010081: HDEF_RS00850
subclass of: SO_0000673
so part of: HDEF_RS00850
location: complement(150062..151552)
location: region:150062-151552:-1
so has part: feature:150062-151552:-1:exon

WP_012737885.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:150062-151552:-1:exon

HDEF_RS00855
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS00855
old locus tag: HDEF_0148
so part of: sequence
location: complement(151692..152066)
location: region:151692-152066:-1
so has part: feature:151692-152066:-1:exon
subclass of: SO_0000010

66260085
type: Gene
SIO_000068: ncbigene

position:151692:-1
position: 151692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:152066:-1
position: 152066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:151692-152066:-1:exon

HDEF_RS00855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS00855
old locus tag: HDEF_0148
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857550.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type III effector protein
translation: MQEILNVLPLVTDIQLLKSSNTIEFILDNVQAQAKDYQHSVCVGLLLCEEKILYDVIFKHISLLFASLEEAQDYGLELRKKHWWLWCRADGDIGTNVEQMASILDQLLSFRHYLISLISNHSKN
SIO_010081: HDEF_RS00855
subclass of: SO_0000673
so part of: HDEF_RS00855
location: complement(151692..152066)
location: region:151692-152066:-1
so has part: feature:151692-152066:-1:exon

WP_044612222.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:151692-152066:-1:exon

HDEF_RS00860
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS00860
old locus tag: HDEF_0149
so part of: sequence
location: 152252..154990
location: region:152252-154990:1
so has part: feature:152252-154990:1:exon
subclass of: SO_0000010

66260086
type: Gene
SIO_000068: ncbigene

position:152252:1
position: 152252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:154990:1
position: 154990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:152252-154990:1:exon

HDEF_RS00860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS00860
old locus tag: HDEF_0149
inference: COORDINATES: protein motif:HMM:NF011874.0
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: two component system sensor kinase
translation: MKKNKSSSLVNKLTLLLGINLTCIWFIATAMNVFFSFENTTTRLIKELENKADLQVGLINQLFQTAERDALLLTQIDEIAPHNAKDFSGSFIQNQNCNRLPLLSSAQNILQVSRMIDQKNYFFSFIIQPEKGIALFTPKTLSHQELIKRQNELLDLLSGSPKDNIFWGKPVYVKNDGWHLSLALCNKHGGFSGIALNINRFFSHDPQKKNQDIHLLLDEAGDLLASSHPLSSKKTINHLLKELRTIKLHDGLQQTENFLVWRLRLPVQKLQQLIVYPRANFLKEAAQPALDQLPFAICILVLLTLTVFFLLRYYLAVPLWNFVKIMSTTGPESMEKRLPMNRHHELGRIAQSYNDLLDILNKQYDTLETRVNERTLQLERAKQVAEQANRRKSLHLTTISHEIRTPLNGALGAIELLKHTSLSPSQLKLLDTTQQCSASLLSIINALLDFSHIESGQMTLVLEQTELLPILDQAMLTIQSQAFKHSLNLYTFVSKEVPLVLKLDALRLRQILINLLGNAVKFTQKGSISLYVQHENHKLCFTVEDTGCGIDEKFQKKIFQPFFQAGINKGTGLGLTIASNLASLMKGTLDLQSTLNLGTRVCFEIPVNEKYAPPTIFSGSLSAPSSLIPQLNAWGIACLSNNEVNPKLLDKDLIYLPGRLYSNVKKILFEQEHLPESKLPVQPWKMSVLLVDDSEINLKIIGMMLSELGHDVELAHSGDEALELAHHQRFDLVLMDIRMPKLNGLQTTRLWRTDLKNRDRECMIVALTANASPSEKQRVCKAGMNDYLCKPVTIADLAGILDLTAQFQIKRDISLVAQVSTLKPVLDTKDKNLISKIYLSMSKLAEEIAESIHNPDPVYLADHLHKLKGCAGQAGFIELQEKVVELEKSIHENNKITEKDIKELKNLNQKII
SIO_010081: HDEF_RS00860
subclass of: SO_0000673
so part of: HDEF_RS00860
location: 152252..154990
location: region:152252-154990:1
so has part: feature:152252-154990:1:exon

WP_012737887.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:152252-154990:1:exon

HDEF_RS00865
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS00865
old locus tag: HDEF_0150
so part of: sequence
location: 155062..155694
location: region:155062-155694:1
so has part: feature:155062-155694:1:exon
subclass of: SO_0000010

66260087
type: Gene
SIO_000068: ncbigene

position:155062:1
position: 155062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:155694:1
position: 155694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:155062-155694:1:exon

HDEF_RS00865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS00865
old locus tag: HDEF_0150
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002209034.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: two component system response regulator
translation: MNVKILIVDDHELIINGIKNMLSPYKRYQVVGQTENGLDVYNLCVQTEPDMVILDLGLPGMNGQEVILQLHRRWPQLNILVLTAREEEHYASQTLKMGALGYVIKKSPQQILMAAVQTVLAGKQYIDPTLNVDSVLKLIKESEHYPSILTSRERQILKLITEGVSNRIIADRLYISEKTVETHRLNMMKKLDVHKVAQLIQWSQRLGINI
SIO_010081: HDEF_RS00865
subclass of: SO_0000673
so part of: HDEF_RS00865
location: 155062..155694
location: region:155062-155694:1
so has part: feature:155062-155694:1:exon

WP_012737888.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:155062-155694:1:exon

HDEF_RS00870
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: map
locus tag: HDEF_RS00870
old locus tag: HDEF_0151
so part of: sequence
location: 155852..156661
location: region:155852-156661:1
so has part: feature:155852-156661:1:exon
subclass of: SO_0000010

66260088
type: Gene
SIO_000068: ncbigene

position:155852:1
position: 155852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:156661:1
position: 156661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:155852-156661:1:exon

HDEF_RS00870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: map
locus tag: HDEF_RS00870
old locus tag: HDEF_0151
EC number: 3.4.11.18
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012737889.1
GO process: GO:0036211 - protein modification process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type I methionyl aminopeptidase
translation: MSIFIKTSEEIEKMRVAGRLAAAVLEMIEPHVKEGMSTGELDSICHDYITNQQKAIPACLGYRGFPKSVCISLNDVICHGIPSDEKILKRGDILNIDVTVIKDGFHGDTSRMFMVGKPTIIAERLCRTTLETLYLGIKMVKPGIRLRSLGKAMQAFVESHHFSVVREYCGHGIGRTFHEDPQVLHYDDEDHGLILKAGMTFTIEPMVNAGKAHIRVMKDKWTVKTKDRSLSAQYEHTVAVTHDGCEILTWRPDEPVSKLIKHQDSSSLR
SIO_010081: HDEF_RS00870
subclass of: SO_0000673
so part of: HDEF_RS00870
location: 155852..156661
location: region:155852-156661:1
so has part: feature:155852-156661:1:exon

WP_012737889.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:155852-156661:1:exon

HDEF_RS00875
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: dapD
locus tag: HDEF_RS00875
old locus tag: HDEF_0152
so part of: sequence
location: 156713..157558
location: region:156713-157558:1
so has part: feature:156713-157558:1:exon
subclass of: SO_0000010

66260089
type: Gene
SIO_000068: ncbigene

position:156713:1
position: 156713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:157558:1
position: 157558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:156713-157558:1:exon

HDEF_RS00875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: dapD
locus tag: HDEF_RS00875
old locus tag: HDEF_0152
EC number: 2.3.1.117
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857545.1
GO function: GO:0008666 - 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase activity [Evidence IEA]
GO process: GO:0009089 - lysine biosynthetic process via diaminopimelate [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase
translation: MSDAQKMIENAYENRASITAKNVAPSLRKTIDEIIEQLDRGERRVAEKINGHWVTHEWLKKTILLFFCIHDNQMIKGLETAYYDKIPLKFSDYQSDRFLRERLRVVPQATVRKGAFIAKNTVLMPSYVNVGAFVDEGTMIDTWATVGSCAQIGKNVHLSGGVGIGGVLEPLQTNPTIIEDNCFIGARSEIVEGVVVEEGAVISMGVFISQSTRIYDRETQTMHYGRVPAGAVVVPGSLPAKDGSHSLYAAIIVKKVDAKTKEKISMNELLRYDECLQKESF
SIO_010081: HDEF_RS00875
subclass of: SO_0000673
so part of: HDEF_RS00875
location: 156713..157558
location: region:156713-157558:1
so has part: feature:156713-157558:1:exon

WP_012737890.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:156713-157558:1:exon

HDEF_RS00880
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: ppnN
locus tag: HDEF_RS00880
old locus tag: HDEF_0153
so part of: sequence
location: 157555..158937
location: region:157555-158937:1
so has part: feature:157555-158937:1:exon
subclass of: SO_0000010

66260090
type: Gene
SIO_000068: ncbigene

position:157555:1
position: 157555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:158937:1
position: 158937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:157555-158937:1:exon

HDEF_RS00880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: ppnN
locus tag: HDEF_RS00880
old locus tag: HDEF_0153
EC number: 3.2.2.10
EC number: 3.2.2.4
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857544.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nucleotide 5'-monophosphate nucleosidase PpnN
translation: MIVNINPLGSMDLLSHLEVDMLKQTQNTYLYDLFRHCALAVLSSGSQTDDSKELLSRYEDFRINILRHERGIELELINPPAAALIDQKIMKLLQANLFSVLRDILFLQGKMSETPFLQDATASVYLTNQVFSILRHARALHTHQEPNLIVCWGGHSINTQEYLYAHQVGHQLGLRELNICTGCGPGVMEAPMKGAAIGHAQQLYKKGRFIGITEPSIIASEPPNPMVNELIIMPDIEKRLEAFVRMAHGIIIFPGGVGTAEEFLYLLSILMDVKNRHQILPLILTGPEESAEYFNALNTFVIETLGPQACRFYQIMIGQEKEVAQKMKKMMKKVKENRCYTKDAYSFNWSIHINEKQQHPFNPTHQNMADLNLKCDQAPEALAAALRCAFSGIVAGNVKEKAIQAVKTQGPFKLKGDPDMLQQLAQLLENFIHQGRMKLTGTAYQPCYEIDISSTFIDQL
SIO_010081: HDEF_RS00880
subclass of: SO_0000673
so part of: HDEF_RS00880
location: 157555..158937
location: region:157555-158937:1
so has part: feature:157555-158937:1:exon

WP_044612427.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:157555-158937:1:exon

HDEF_RS00885
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS00885
so part of: sequence
location: complement(159262..159654)
location: region:159262-159654:-1
so has part: feature:159262-159654:-1:exon
subclass of: SO_0000010

66260091
type: Gene
SIO_000068: ncbigene

position:159262:-1
position: 159262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:159654:-1
position: 159654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:159262-159654:-1:exon

HDEF_RS00885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS00885
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRRLNHFTDLGAFWGSKPERFLEELQVQNHKPTDSTGKSQTTLEEGQKKSTETPPPISLKTEDMERTKKRPPVSPSQSDPKENFLEQIQRGVPLKKVKVEETPKKPSDSTAFKNMITHRMLDTGPGPDAD
SIO_010081: HDEF_RS00885
subclass of: SO_0000673
so part of: HDEF_RS00885
location: complement(159262..159654)
location: region:159262-159654:-1
so has part: feature:159262-159654:-1:exon

WP_148206988.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:159262-159654:-1:exon

HDEF_RS00890
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: recJ
locus tag: HDEF_RS00890
old locus tag: HDEF_0155
so part of: sequence
location: 159830..161566
location: region:159830-161566:1
so has part: feature:159830-161566:1:exon
subclass of: SO_0000010

66260092
type: Gene
SIO_000068: ncbigene

position:159830:1
position: 159830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:161566:1
position: 161566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:159830-161566:1:exon

HDEF_RS00890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: recJ
locus tag: HDEF_RS00890
old locus tag: HDEF_0155
EC number: 3.1.11.6
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005166036.1
GO function: GO:0008409 - 5'-3' exonuclease activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: single-stranded-DNA-specific exonuclease RecJ
translation: MNIKKQLRRREMHHHPLSETYPQLIRQLYASRGITKDQQLARGTKSLCDWQALAGIEDAIQILKEAFSLQKRMMIVGDFDVDGATSTALAMMALEAMGAQNVHFLIPNRFEEGYGLTPKIVEQVSLRGADLIITVDNGISSHEGVDLAHHKGMQVLITDHHLPTERLPNADAIINPNQLNCPFPSKSLAGVGVTFYLMLGLRAHLRKEGWFHKKNIQEPNLAEFLDLVALGTVADVVPLDTNNRILVHQGLNRIRAGKSRPGIVALLEVASRSEHRLTAADLGFALAPRLNAAGRLDNMSTGVSLLLTQDLSEARELARDLDALNKVRREIEQSMKKEALDLCHQIECHDQPLPKGLALYHPKWHQGVVGILASRIKDRFYRPVIAFAPTDGGQLKGSGRSVTSVHMRDLLEQIDRAYPGLILKFGGHAMAAGLLIEQNKFDLFRQCFAERVTASLKDLELENSIWSDGELSPDKISLETAQLLRDAGPWGQGFPEPVFDGKFRILKQRLLCGCHLKLQVEPIEGGIPLDAIAFNVDSKSWPYPLFKKVTLAYKLDINVFRQQPQLQLMIQGIWEDNG
SIO_010081: HDEF_RS00890
subclass of: SO_0000673
so part of: HDEF_RS00890
location: 159830..161566
location: region:159830-161566:1
so has part: feature:159830-161566:1:exon

WP_012737893.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:159830-161566:1:exon

HDEF_RS00895
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS00895
old locus tag: HDEF_0156
so part of: sequence
location: complement(161639..162103)
location: region:161639-162103:-1
so has part: feature:161639-162103:-1:exon
subclass of: SO_0000010

66260093
type: Gene
SIO_000068: ncbigene

position:161639:-1
position: 161639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:162103:-1
position: 162103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:161639-162103:-1:exon

HDEF_RS00895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS00895
old locus tag: HDEF_0156
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005272513.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF986 family protein
translation: MSNVDHTLIIFIISFLIYAVYNEFILNFIKGKTILKVNLERKNKVDATILIGLTIIFIYNNMINLSSPLTIYLLFGLLLLIIYIFYIRYPKLIFKKDGFFYCNILINYKNIKKIKLSEDGILAIHLKKRSIFIKVVYFEDLKKMVHVFLEKTTF
SIO_010081: HDEF_RS00895
subclass of: SO_0000673
so part of: HDEF_RS00895
location: complement(161639..162103)
location: region:161639-162103:-1
so has part: feature:161639-162103:-1:exon

WP_012737894.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:161639-162103:-1:exon

HDEF_RS00900
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS00900
old locus tag: HDEF_0157
so part of: sequence
location: complement(162190..163083)
location: region:162190-163083:-1
so has part: feature:162190-163083:-1:exon
subclass of: SO_0000010

66260094
type: Gene
SIO_000068: ncbigene

position:162190:-1
position: 162190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:163083:-1
position: 163083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:162190-163083:-1:exon

HDEF_RS00900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS00900
old locus tag: HDEF_0157
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002211067.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PTS mannose transporter subunit IID
translation: MIDTTETSQKETQTIADENVASSKKKLTAGDMRSAFIRSNLFQGSWNFERMQALGFCFSMIPAIRRLYPENNAERQQAIKRHLEFFNTHPYVMAPVIGVTMAMEEKRANGAPIDDAAINGIKVGLMGPLAGVGDPIFWGTVRPVFAALGAGIAMSGSLLGPLLFFILFNLVRLLSLYYGIAYGYSKGMSMVSDMKGGVLQKLTEGASILGLFVMGALVNKWTHINIPVVVSTITDQTGHTTVTTLQTIFDQLMPGLVPLLLTFACMWMLRRNVNALWIILGFFAIGIFGYWLGFLAP
SIO_010081: HDEF_RS00900
subclass of: SO_0000673
so part of: HDEF_RS00900
location: complement(162190..163083)
location: region:162190-163083:-1
so has part: feature:162190-163083:-1:exon

WP_012737895.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:162190-163083:-1:exon

HDEF_RS00905
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS00905
old locus tag: HDEF_0158
so part of: sequence
location: complement(163098..163901)
location: region:163098-163901:-1
so has part: feature:163098-163901:-1:exon
subclass of: SO_0000010

66260095
type: Gene
SIO_000068: ncbigene

position:163098:-1
position: 163098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:163901:-1
position: 163901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:163098-163901:-1:exon

HDEF_RS00905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS00905
old locus tag: HDEF_0158
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002910918.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PTS mannose/fructose/sorbose transporter subunit IIC
translation: MEITTLQILLIFFIACIAGMDSVLDEFQFHRPLVACTLIGLVLGDLKTGIIIGGTLEMIALGWMNIGAAMAPDTALASIISSILVIAGGQSIGAGIALAIPLAAAGQVLTIIVRSITVAFQHAADRAAEQGNLRGISFLHISALFLQAMRVAVPVLVVALSVGTSEVRALLSSIPEVVTGGLNIAGGIIVVVGYAMVINMMGARYLMPFFYLGFVTAAFIQFNLVALGVIGIVMAILYIQLNPKYHKSASEPSDANKLYNDLDNELD
SIO_010081: HDEF_RS00905
subclass of: SO_0000673
so part of: HDEF_RS00905
location: complement(163098..163901)
location: region:163098-163901:-1
so has part: feature:163098-163901:-1:exon

WP_012737896.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:163098-163901:-1:exon

HDEF_RS00910
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: manX
locus tag: HDEF_RS00910
old locus tag: HDEF_0159
so part of: sequence
location: complement(163953..164963)
location: region:163953-164963:-1
so has part: feature:163953-164963:-1:exon
subclass of: SO_0000010

66260096
type: Gene
SIO_000068: ncbigene

position:163953:-1
position: 163953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:164963:-1
position: 164963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:163953-164963:-1:exon

HDEF_RS00910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: manX
locus tag: HDEF_RS00910
old locus tag: HDEF_0159
EC number: 2.7.1.191
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012737897.1
GO function: GO:0008982 - protein-N(PI)-phosphohistidine-sugar phosphotransferase activity [Evidence IEA]
GO process: GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PTS mannose transporter subunit IIAB
translation: MNIAIIIGTHGNCAKYLLETAEMLIGQQKNVAYVDFLPGENTETLVHKYHEILATLQAQDGVLFLLDTWGGSPFNAANRIIADKENYEAISGVNVPMLIEVLMARDDDISLSQLVSIALETGSAGIKASKMSNEPALKKSNLPSLNIHPESERFNLASVNDPQNQGHMKIQLVRIDDRLIHGQVATRWTKETNVNRIIVVSDEVAADQMRISLLKQVAPPGVSGHVININKAIRVYHNPKYANDRVMLLFTHPSDVLRLIEGGVKISSVNVGGMAYTQGKIKINNAISVFEKDIDAFTTLSQLGIKLDVRQVPSDISSNIMDLISKIKNKKLIYSE
SIO_010081: HDEF_RS00910
subclass of: SO_0000673
so part of: HDEF_RS00910
location: complement(163953..164963)
location: region:163953-164963:-1
so has part: feature:163953-164963:-1:exon

WP_012737897.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:163953-164963:-1:exon

HDEF_RS00915
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS00915
old locus tag: HDEF_0160
so part of: sequence
location: complement(165339..166580)
location: region:165339-166580:-1
so has part: feature:165339-166580:-1:exon
subclass of: SO_0000010

66260097
type: Gene
SIO_000068: ncbigene

position:165339:-1
position: 165339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:166580:-1
position: 166580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:165339-166580:-1:exon

HDEF_RS00915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS00915
old locus tag: HDEF_0160
EC number: 2.1.2.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012737898.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: serine hydroxymethyltransferase
translation: MSKNIAEYDADLWRAMKQEIIRQEEHIELIASENYTSHLVMEAQGSQLTNKYAEGYPRKRYYGGCENVDIVEELAIERAKKLFDADYANVQPHSGSQANTAVYMALLNPGDTVLGMDLNHGGHLTHGSAANFSGKLYNIIPYGVDQKGKIDYSTLEKLATHHKPKMIIGGFSAYSGIVDWRKMRTIADSVGAYLLVDMAHVAGLVATGVYPTPLPHAHVVTTTTHKTLAGPRGGLILAKGGNESLYKKLNSAIFPGIQGGPLMHVIAAKAVAFKEALEPQFKIYQQQVVKNAKAMVDIFLKRGYEIVSGGTENHLFLLNLVDKGLTGKEVDELLGRANITVNKNTVPNDPKSPFITSGIRIGTPAITKRGFKEEEAREVSAWICDLLDHTQDEKLIHNVKEKVLSICARFPVY
SIO_010081: HDEF_RS00915
subclass of: SO_0000673
so part of: HDEF_RS00915
location: complement(165339..166580)
location: region:165339-166580:-1
so has part: feature:165339-166580:-1:exon

WP_012737898.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:165339-166580:-1:exon

HDEF_RS00920
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: tolQ
locus tag: HDEF_RS00920
old locus tag: HDEF_0162
so part of: sequence
location: 167214..167933
location: region:167214-167933:1
so has part: feature:167214-167933:1:exon
subclass of: SO_0000010

66260098
type: Gene
SIO_000068: ncbigene

position:167214:1
position: 167214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:167933:1
position: 167933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:167214-167933:1:exon

HDEF_RS00920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: tolQ
locus tag: HDEF_RS00920
old locus tag: HDEF_0162
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015740568.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Tol-Pal system protein TolQ
translation: MAEMSILDLFLKASFLVKGIISILICFSIFSWAIILKKTSILRSATKAANAFENRFWSGIELSRLYQQSDDRRDKLSGSEQIFYSGFKEFVRLHRAHHHVCESAVKGAARAMRISMNRELEALETHVPFLGTIGSISPYIGLFGTVWGIMHSFIALGAAKQATLQMVAPGIAEALIATAIGLFSAIPAVMAYNRFNQNINKIEQNYDNFVEEFIAILHREVVTSETDKNSIINTKAVQQ
SIO_010081: HDEF_RS00920
subclass of: SO_0000673
so part of: HDEF_RS00920
location: 167214..167933
location: region:167214-167933:1
so has part: feature:167214-167933:1:exon

WP_044612428.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:167214-167933:1:exon

HDEF_RS00925
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: tolR
locus tag: HDEF_RS00925
old locus tag: HDEF_0164
so part of: sequence
location: 167968..168390
location: region:167968-168390:1
so has part: feature:167968-168390:1:exon
subclass of: SO_0000010

66260099
type: Gene
SIO_000068: ncbigene

position:167968:1
position: 167968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:168390:1
position: 168390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:167968-168390:1:exon

HDEF_RS00925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: tolR
locus tag: HDEF_RS00925
old locus tag: HDEF_0164
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857103.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: colicin uptake protein TolR
translation: MRIRGRHRRELKPEINMVPLLDVLLVLLLIFMATAPIITQSVEVNLPETSHSKMVDGNHSPVIIEVSGTGQYAMIIDHKRMEALSEQQLISEAKMQLKNNSKAIFLIGGAKEVAYDEIMKVLNMLHQTGVTSVGLMTQTI
SIO_010081: HDEF_RS00925
subclass of: SO_0000673
so part of: HDEF_RS00925
location: 167968..168390
location: region:167968-168390:1
so has part: feature:167968-168390:1:exon

WP_012737902.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:167968-168390:1:exon

HDEF_RS00930
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: tolA
locus tag: HDEF_RS00930
old locus tag: HDEF_0165
so part of: sequence
location: 168434..169381
location: region:168434-169381:1
so has part: feature:168434-169381:1:exon
subclass of: SO_0000010

66260100
type: Gene
SIO_000068: ncbigene

position:168434:1
position: 168434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:169381:1
position: 169381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:168434-169381:1:exon

HDEF_RS00930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: tolA
locus tag: HDEF_RS00930
old locus tag: HDEF_0165
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012737903.1
GO component: GO:0098567 - periplasmic side of plasma membrane [Evidence IEA]
GO function: GO:0005215 - transporter activity [Evidence IEA]
GO process: GO:0006810 - transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cell envelope integrity protein TolA
translation: MEKFTKENKLNYALILSGFLHLIFIIFIIVNSSRFKLNKGSQGDKDNVIDAIIVDSSAMTEKYQPQKNQGAESKLVLERQKKEAQQQAEVLLKKQNEEQQRLKILEEERLQAQENEKQEIIKRKRQMEEQHQRLVDQQKQIDSAIKKAQEEQEQVKLAAAKAKIEARRIRSEIEKKAQAEQKRKKAVAAAKKKSENTTKNVDQLFDALASPQNTPKIQTTERGKKGSDTEIKSYLNQIIQAIQSKFYDASLYKGKTCHLRIKLAPDGKLISIREESGDTDLCQAAVAAAKQAHIPKPPNKDVYQVFKNASLVFTP
SIO_010081: HDEF_RS00930
subclass of: SO_0000673
so part of: HDEF_RS00930
location: 168434..169381
location: region:168434-169381:1
so has part: feature:168434-169381:1:exon

WP_012737903.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:168434-169381:1:exon

HDEF_RS00935
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: tolB
locus tag: HDEF_RS00935
old locus tag: HDEF_0166
so part of: sequence
location: 169453..170742
location: region:169453-170742:1
so has part: feature:169453-170742:1:exon
subclass of: SO_0000010

66260101
type: Gene
SIO_000068: ncbigene

position:169453:1
position: 169453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:170742:1
position: 170742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:169453-170742:1:exon

HDEF_RS00935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: tolB
locus tag: HDEF_RS00935
old locus tag: HDEF_0166
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005288883.1
GO component: GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO function: GO:0005215 - transporter activity [Evidence IEA]
GO process: GO:0006810 - transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Tol-Pal system beta propeller repeat protein TolB
translation: MKPVFKMLLSLLILWTSLLHAQVRIQITQGVDSARPIAVVPFKWLGTVEPPEKIADIISSDLRNSGKFNPIDPSRMPEKPFTASELITSSWYGLGVDAVVVGQIQAGADNHYLISYQLVELSSGTVLTQNQYKVTQQWLRYAAHSASDEIFQKLTGIKGAFSTRIAYVVQKNTRQLPYELKISDYDGYNPFVVYRSSQPLMSPAWSPDGQKLAYVNFESGRSALVIQNLASGSIQKIANFQGHNGAPAFSPDGAKLAFALSKTGSLNIYMMDLASGNITQITDSRSNNTEPSWFPDSRYLAYTSDQAGRPQVYKIDISGHGVPQRITWNAKQNQNSAVSPDGTFLILVNSKDGQQHIAKQDLKTGDVQILTDTLLDETPSIAPNTTMVIYSSTQNANSVLQLVSTDGRFKALLPEVDGQVKFPAWSPYL
SIO_010081: HDEF_RS00935
subclass of: SO_0000673
so part of: HDEF_RS00935
location: 169453..170742
location: region:169453-170742:1
so has part: feature:169453-170742:1:exon

WP_012737904.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:169453-170742:1:exon

HDEF_RS00940
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: pal
locus tag: HDEF_RS00940
old locus tag: HDEF_0167
so part of: sequence
location: 170782..171303
location: region:170782-171303:1
so has part: feature:170782-171303:1:exon
subclass of: SO_0000010

66260102
type: Gene
SIO_000068: ncbigene

position:170782:1
position: 170782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:171303:1
position: 171303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:170782-171303:1:exon

HDEF_RS00940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: pal
locus tag: HDEF_RS00940
old locus tag: HDEF_0167
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004176849.1
GO component: GO:0009279 - cell outer membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peptidoglycan-associated lipoprotein Pal
translation: MKFNHKILKRLTLALFIFSVMACTSHKNTNHSEMGAETTDISTDMNGNSGVSSADERARAQIEGLQKTSVVYFDFDKYNIKPNFAEILNAHADFLLNNPSFKVDIEGHTDQSGTSEYNMALGERRANAVKMYLQGKGVSAQQMSIVSYGKEKPVYRGNNKEDYSQNRRAVLIY
SIO_010081: HDEF_RS00940
subclass of: SO_0000673
so part of: HDEF_RS00940
location: 170782..171303
location: region:170782-171303:1
so has part: feature:170782-171303:1:exon

WP_012737905.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:170782-171303:1:exon

HDEF_RS00945
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: ybgF
locus tag: HDEF_RS00945
old locus tag: HDEF_0168
so part of: sequence
location: 171321..172094
location: region:171321-172094:1
so has part: feature:171321-172094:1:exon
subclass of: SO_0000010

66260103
type: Gene
SIO_000068: ncbigene

position:171321:1
position: 171321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:172094:1
position: 172094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:171321-172094:1:exon

HDEF_RS00945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: ybgF
locus tag: HDEF_RS00945
old locus tag: HDEF_0168
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012005715.1
GO function: GO:0005515 - protein binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tol-pal system protein YbgF
translation: MNSNFKQRYSLSLLIGALTIPSTTMAKAPVSQLNSESLEYRITQLERISGGRGQLLTEYEQKIADLQEDVNDLRGQIQKNQYEIEQIKKKQSNQQSDMSFKNDKTEIQAITLKNTDNKNRATKVATPESKNNEKKDYDAALFFIFEKKDDDQAIIKLQHFVEEYSESIYRPNAYYWLGQLFYNKGMKNKASYYYAVLVKKYHKSPKRPDAMLKVGMIMQETGKTDKAKQIYQRVIEEYPLSAAKKEAQKKLNAAKKK
SIO_010081: HDEF_RS00945
subclass of: SO_0000673
so part of: HDEF_RS00945
location: 171321..172094
location: region:171321-172094:1
so has part: feature:171321-172094:1:exon

WP_012737906.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:171321-172094:1:exon

HDEF_RS00950
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS00950
old locus tag: HDEF_0169
so part of: sequence
location: 172623..173762
location: region:172623-173762:1
so has part: feature:172623-173762:1:exon
subclass of: SO_0000010

66260104
type: Gene
SIO_000068: ncbigene

position:172623:1
position: 172623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:173762:1
position: 173762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:172623-173762:1:exon

HDEF_RS00950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS00950
old locus tag: HDEF_0169
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857098.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cupin domain-containing protein
translation: MYLMINWQDFLQHYWQKHPMLLKQAVVNFINPVSPDELAKLVIEKALESQLIKKVNGKCQVVHNVFNGYKSLGRHNWSLKVQAINHWHRPAEEFMYLFRTFPDWYREDLTVSFSVPGGGLGLYAKTSDVFIIQGIGRSRWRIWNPLSSVVHYDQKNFFPSIINEELVSGDALYIPKGFPHEAISSETALSYCINLWTDNSLRMIRNWTESLSDKNHRGIEYSPSPDLLMRDDPTEILPQDITAIQNIMNQFLLQQRDDLETWFGQQMSQSSYDLPMAPAAQVYQPSQVQSILQQDISLCRLMGLRMLHIGDRYFLNGESLASNYADAWNIMAHNTTINGYMLRKFIDDNDFMTQLTLLINKGYWYFQGISMKNFFDINV
SIO_010081: HDEF_RS00950
subclass of: SO_0000673
so part of: HDEF_RS00950
location: 172623..173762
location: region:172623-173762:1
so has part: feature:172623-173762:1:exon

WP_012737907.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:172623-173762:1:exon

HDEF_RS00955
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS00955
old locus tag: HDEF_0170
so part of: sequence
location: 173848..175158
location: region:173848-175158:1
so has part: feature:173848-175158:1:exon
subclass of: SO_0000010

66260105
type: Gene
SIO_000068: ncbigene

position:173848:1
position: 173848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:175158:1
position: 175158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:173848-175158:1:exon

HDEF_RS00955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS00955
old locus tag: HDEF_0170
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012737908.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cytosine permease
translation: MVEIMKNKLPNTHDFCFMRVPADCRSSLFTMVMVRIGIMTALGQFMLGAMLGHTMSFYDALMATFLGSMLLEFVSLGLGIAGAREGFSTSQLARWCGFGFYGSSLVSILIAFSLIGWFGVQNAILANGLNYALNNKPGFVICALLSGLGLTALMTFGFRALGWIAIVTVPLFMLVVGWIVCELLAGYHLIELMTTLPTGEPMTLGMAATAVGGGYIVAAVATADIGRYCQNGRHVFWMITLSIIVGEFVVNSIAILIAHALNTSDVVTIMTQTAGWIGLLAVILSALKINDSNLYSSSLALLSAVEVISGRRLSYVGLTLVLGTAGTLLTVAGILEKFTGFLLLLGVMFPPVAGVMLCDYWLLKTHRVELDESLRQQQLPDPKILPAVGWNGVIACLAGILTGLMIKMGIPSLNSLLVSITVYALLNGYPFKKAVK
SIO_010081: HDEF_RS00955
subclass of: SO_0000673
so part of: HDEF_RS00955
location: 173848..175158
location: region:173848-175158:1
so has part: feature:173848-175158:1:exon

WP_012737908.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:173848-175158:1:exon

HDEF_RS00960
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS00960
old locus tag: HDEF_0171
so part of: sequence
location: 175155..176252
location: region:175155-176252:1
so has part: feature:175155-176252:1:exon
subclass of: SO_0000010

66260106
type: Gene
SIO_000068: ncbigene

position:175155:1
position: 175155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:176252:1
position: 176252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:175155-176252:1:exon

HDEF_RS00960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS00960
old locus tag: HDEF_0171
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857096.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF917 domain-containing protein
translation: MTWLDLEAIEHISYGASVLASGGGGDPYIGKIMAQQAIQQHGPIRLLDSEAFQPHELLLSTGMIGSPTVMVEKIPNGEESIVACQCMEKHLGRTIAGIYPIEAGGINSLLPLATACRLGLPVVDVDGMGRAFPEFQMTTFYLDGINVSTFIIADEKLNTVLVDAIDSHQAEKFARAVTVKMGGAAIFAASPISPTQARNSGIKGTISFMRHIGKRMEQARAARENLVDTLVGLLRGHVLFRGKAIRVNQHSEDGFTRGIAIFTGVDENVGGRFEVLFQNEYLLAKQEEIPLCITPDLIILLDEDTGLPVLAERLSYGMRVVVIGAPADDKWRTSRGIEVCGPGYFNYPDDYKPVEMLAMAPKGAI
SIO_010081: HDEF_RS00960
subclass of: SO_0000673
so part of: HDEF_RS00960
location: 175155..176252
location: region:175155-176252:1
so has part: feature:175155-176252:1:exon

WP_044612224.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:175155-176252:1:exon

HDEF_RS00965
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS00965
old locus tag: HDEF_0172
so part of: sequence
location: 176264..177829
location: region:176264-177829:1
so has part: feature:176264-177829:1:exon
subclass of: SO_0000010

66260107
type: Gene
SIO_000068: ncbigene

position:176264:1
position: 176264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:177829:1
position: 177829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:176264-177829:1:exon

HDEF_RS00965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS00965
old locus tag: HDEF_0172
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006704306.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hydantoinase/oxoprolinase family protein
translation: MGIDVGGTHTDAVLLNSQQEIVAFTKQPITADVMQGIGRAVEVILAQSSINPAQIDRAMLGTTHCTNAIVERKNLEPVAHFRLGAPATLAVLPLVNIPANFREKLSVHLFTVSGGYHYDGQLLAALDEEMIRRQLYSVKGLVSAVSVCGVFSPVMDTQERLVGEIAQEILGPDIAISLSSEIGCIGLLERENAAILNAALCGVAQSLTNGFKETLLQHNISAPLYFGQNDGTLMPVKQARRLPILTIASGSTNSICGAAMLTDLEDALVVDIGGTTTDVGVLKNGFPRQSSLAAEIGGVRTSFRMPDITSIGLGGGSLVTFDSDGTIHVGPKSVGYQLTQHSLVFGGDTLTVTDIAVANGWANIGDPGKLAHLCSKQVQRVASHYVAMVERTLERMNTSLSDMPVILVGGGACLLPIGLRGASKVIRPAHASVANATGVAIAKVSGSVDTIVSTGTETLEACLLQAEKQARKAAVEAGAIPDTVRIIELESLPLGYMPGNTVRIRAKAAGTLSTCLSPAQD
SIO_010081: HDEF_RS00965
subclass of: SO_0000673
so part of: HDEF_RS00965
location: 176264..177829
location: region:176264-177829:1
so has part: feature:176264-177829:1:exon

WP_238526172.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:176264-177829:1:exon

HDEF_RS00970
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS00970
old locus tag: HDEF_0173
so part of: sequence
location: complement(177878..178618)
location: region:177878-178618:-1
so has part: feature:177878-178618:-1:exon
subclass of: SO_0000010

66260108
type: Gene
SIO_000068: ncbigene

position:177878:-1
position: 177878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:178618:-1
position: 178618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:177878-178618:-1:exon

HDEF_RS00970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS00970
old locus tag: HDEF_0173
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857094.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MNSLKKITNSLPDTTQVSDVLPPQFVMLWETSQEPWGVKDVDSKYIYANRAYYRLLNINPATFCIVGHLDDQLPSPIADFAPHFQQHDRQTMQRQDRLCSIEIHPYEPDQLMRPYYFDKYPLYEAHSRLCIGTIFHARKVEEILLKKRLLQDAKPGYFLFYPPENIFTEKELEVIFCVLQNMSSKLIALHLGLSHRTVENKLQVIYEKAGTHSLSQFNDYCRDKGYHHYFPQKLLSPASKLLDMSL
SIO_010081: HDEF_RS00970
subclass of: SO_0000673
so part of: HDEF_RS00970
location: complement(177878..178618)
location: region:177878-178618:-1
so has part: feature:177878-178618:-1:exon

WP_044612225.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:177878-178618:-1:exon

HDEF_RS00980
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS00980
old locus tag: HDEF_0176
so part of: sequence
location: complement(179871..181247)
location: region:179871-181247:-1
so has part: feature:179871-181247:-1:exon
subclass of: SO_0000010

66260109
type: Gene
SIO_000068: ncbigene

position:179871:-1
position: 179871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:181247:-1
position: 181247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:179871-181247:-1:exon

HDEF_RS00980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS00980
old locus tag: HDEF_0176
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857091.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphomannomutase/phosphoglucomutase
translation: MPKLSCFKAYDIRGRLGEELNEEIAYRVGRAYAELTKAKTVVVGGDVRLSSESLKCALSRGLQAGGVDVLDIGVSGTEEIYFATFHLGLDGGIEVTASHNPIDYNGMKLVQKGARPISGDTGLKEIQKLAELNAFSPLEHRSTGCYKKISTMTAYIDHLMSYITPAHFTMPLKLVVNSGNGAAGPVIDMLENRFNTLKMSLTLVKMHHQSDGTFPNGIPNPLLPERRQATSDAVLAEGADMGIAFDGDFDRCFFFDHRGQFIEGYYMVGLLAEAFLQKEQGARIIHDPRLSWNTIDTVKAYGGKAVMSRTGHAFLKERMRSEDAIYGGEMSAHHYFRDFAYSDSGMIPWLLIAELLCVKGQKLQQLVEERMAAYPVSGEINCQLANPTQAIERVRAAYQPNALSVDETDGISMEFKDWRFNLRSSNTEPVVRLNVESRANKALLDEKTAEILTLLNAR
SIO_010081: HDEF_RS00980
subclass of: SO_0000673
so part of: HDEF_RS00980
location: complement(179871..181247)
location: region:179871-181247:-1
so has part: feature:179871-181247:-1:exon

WP_012737914.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:179871-181247:-1:exon

HDEF_RS00985
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS00985
old locus tag: HDEF_0177
so part of: sequence
location: 181439..181660
location: region:181439-181660:1
so has part: feature:181439-181660:1:exon
subclass of: SO_0000010

66260110
type: Gene
SIO_000068: ncbigene

position:181439:1
position: 181439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:181660:1
position: 181660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:181439-181660:1:exon

HDEF_RS00985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS00985
old locus tag: HDEF_0177
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012737915.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIKTHLLTFILLLIVHFNAQAEQIPRCLLNEFSLFQKDDLKTMPKKEFMNTSSKENKKECWNTGGTFHVFICH
SIO_010081: HDEF_RS00985
subclass of: SO_0000673
so part of: HDEF_RS00985
location: 181439..181660
location: region:181439-181660:1
so has part: feature:181439-181660:1:exon

WP_012737915.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:181439-181660:1:exon

HDEF_RS00990
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS00990
old locus tag: HDEF_0178
so part of: sequence
location: complement(181710..182141)
location: region:181710-182141:-1
so has part: feature:181710-182141:-1:exon
subclass of: SO_0000010

66260111
type: Gene
SIO_000068: ncbigene

position:181710:-1
position: 181710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:182141:-1
position: 182141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:181710-182141:-1:exon

HDEF_RS00990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS00990
old locus tag: HDEF_0178
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012737916.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF29 domain-containing protein
translation: MTTLYDDDFYGWSQEQANLLRTKRFNELDAENLLEEIEAMGRSERRELESRLEKLLSHLLKWQYQPSRRGKSWLLTIKEQRRKFVDCLNENPSLRNKKEKRLIIVYQYARLSAEKETNLSESVFPDQCPWTFDQIMDNEFFPE
SIO_010081: HDEF_RS00990
subclass of: SO_0000673
so part of: HDEF_RS00990
location: complement(181710..182141)
location: region:181710-182141:-1
so has part: feature:181710-182141:-1:exon

WP_012737916.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:181710-182141:-1:exon

HDEF_RS00995
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS00995
old locus tag: HDEF_0179
so part of: sequence
location: complement(182219..183181)
location: region:182219-183181:-1
so has part: feature:182219-183181:-1:exon
subclass of: SO_0000010

66260112
type: Gene
SIO_000068: ncbigene

position:182219:-1
position: 182219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:183181:-1
position: 183181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:182219-183181:-1:exon

HDEF_RS00995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS00995
old locus tag: HDEF_0179
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017893174.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD-dependent epimerase/dehydratase family protein
translation: MKTSKKIAILGGSGFIGTRLCQRLVEANNDFVILDKNKSAAFPEKWQFADVTQPSSLDKTLLGIDMIINLSAEHQDNVEPKSLYYDVNVQGAKNLCDAAERLNIQHMVFTSSVAVYGFVENETGEDGAYHPFNDYGKSKLAAEQVYDEWVAKDLNRTLVTVRPTVVFGENNRGNVYNLFKQIASGRFVMVGKGENQKSMAYVENVAAFLQYVLTLPLKQRYVFNYVDKPDFTMNELTDIICDTLNKKKNHFRLPYSLGLLAGSCFDLLAKITGEKYPISRIRIEKFCARTQFKSDEIKQYDFKPPVSLKEGIIRTVREEF
SIO_010081: HDEF_RS00995
subclass of: SO_0000673
so part of: HDEF_RS00995
location: complement(182219..183181)
location: region:182219-183181:-1
so has part: feature:182219-183181:-1:exon

WP_012737917.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:182219-183181:-1:exon

HDEF_RS01000
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS01000
old locus tag: HDEF_0181
so part of: sequence
location: complement(183842..185269)
location: region:183842-185269:-1
so has part: feature:183842-185269:-1:exon
subclass of: SO_0000010

66260113
type: Gene
SIO_000068: ncbigene

position:183842:-1
position: 183842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:185269:-1
position: 185269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:183842-185269:-1:exon

HDEF_RS01000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS01000
old locus tag: HDEF_0181
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012737919.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glucosyltransferase domain-containing protein
translation: MKDNKNMIFYLVLTLIYIFPLILANVYYIDDMGRAMSGYGWNHSYDGRILSTLLMQMLSLNTTIGDLFPYTTILSALIFTTSGYFTCKISGIEDQKKIKICSFIPLVSPFILQNLSYRYDCLPMSISVIACIIPFLFFSNQYIFIILSIIGLLVSAFTYQSSISIYPMLCIIKSIRDLIDNKHQEVIKNIFLSIVSFFIFLLMFKIIQILFSIQIDEYRSDLVFSTSNPFELIKNNIRLVKNTVSILNYGITKFNVYGLSTLTFLSVILFLFSPVKIINKLILIFLLFGLPVISILIPLLLKNTNVSPRVLIGISFIPYGCLIFISRLSNKMCTYIGTFIFLTALPIMSNYSNALLSQNKYELEMARRIFNKIDIKDQKIVVDGILTESSEVKIAKKNFPFLNSIIPHHFSESWIGLLLNLNGIINNGRHLPTPEESKSARNKKCLIPITDTHHHYIIRSDLKNIVIDFNKEKCD
SIO_010081: HDEF_RS01000
subclass of: SO_0000673
so part of: HDEF_RS01000
location: complement(183842..185269)
location: region:183842-185269:-1
so has part: feature:183842-185269:-1:exon

WP_012737919.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:183842-185269:-1:exon

HDEF_RS01005
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS01005
old locus tag: HDEF_0182
pseudo: true
so part of: sequence
location: complement(185276..186202)
location: region:185276-186202:-1
so has part: feature:185276-186202:-1:exon
subclass of: SO_0000010

66260114
type: Gene
SIO_000068: ncbigene

position:185276:-1
position: 185276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:186202:-1
position: 186202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:185276-186202:-1:exon

HDEF_RS01005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS01005
old locus tag: HDEF_0182
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000703667.1
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: glycosyltransferase family 2 protein
SIO_010081: HDEF_RS01005
subclass of: SO_0000673
so part of: HDEF_RS01005
location: complement(185276..186202)
location: region:185276-186202:-1
so has part: feature:185276-186202:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:185276-186202:-1:exon

HDEF_RS12890
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS12890
so part of: sequence
location: complement(186241..186519)
location: region:186241-186519:-1
so has part: feature:186241-186519:-1:exon
subclass of: SO_0000010

70691984
type: Gene
SIO_000068: ncbigene

position:186241:-1
position: 186241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:186519:-1
position: 186519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:186241-186519:-1:exon

HDEF_RS12890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS12890
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKRSCYQSLGGYDLSLKIAADYDAMVRYMLIKKITVVYIPKILVYMKMGGISTRLSDKYASFKEEMIVIQRYQLGGFITFIKKKLYKLPQFF
SIO_010081: HDEF_RS12890
subclass of: SO_0000673
so part of: HDEF_RS12890
location: complement(186241..186519)
location: region:186241-186519:-1
so has part: feature:186241-186519:-1:exon

WP_234809510.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:186241-186519:-1:exon

HDEF_RS12895
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS12895
pseudo: true
so part of: sequence
location: complement(<186586..186980)
location: region:186586-186980:-1
so has part: feature:186586-186980:-1:exon
subclass of: SO_0000010

70691985
type: Gene
SIO_000068: ncbigene

position:186586:-1
position: 186586
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:186980:-1
position: 186980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:186586-186980:-1:exon

HDEF_RS12895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS12895
inference: COORDINATES: protein motif:HMM:NF012745.2
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: glycosyltransferase
SIO_010081: HDEF_RS12895
subclass of: SO_0000673
so part of: HDEF_RS12895
location: complement(<186586..186980)
location: region:186586-186980:-1
so has part: feature:186586-186980:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:186586-186980:-1:exon

HDEF_RS01015
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS01015
old locus tag: HDEF_0184
pseudo: true
so part of: sequence
location: complement(186983..188300)
location: region:186983-188300:-1
so has part: feature:186983-188300:-1:exon
subclass of: SO_0000010

66260116
type: Gene
SIO_000068: ncbigene

position:186983:-1
position: 186983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:188300:-1
position: 188300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:186983-188300:-1:exon

HDEF_RS01015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS01015
old locus tag: HDEF_0184
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015839590.1
GO function: GO:0004476 - mannose-6-phosphate isomerase activity [Evidence IEA]
GO process: GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase
SIO_010081: HDEF_RS01015
subclass of: SO_0000673
so part of: HDEF_RS01015
location: complement(186983..188300)
location: region:186983-188300:-1
so has part: feature:186983-188300:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:186983-188300:-1:exon

HDEF_RS12365
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS12365
old locus tag: HDEF_0185
so part of: sequence
location: complement(188314..189231)
location: region:188314-189231:-1
so has part: feature:188314-189231:-1:exon
subclass of: SO_0000010

66262048
type: Gene
SIO_000068: ncbigene

position:188314:-1
position: 188314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:189231:-1
position: 189231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:188314-189231:-1:exon

HDEF_RS12365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS12365
old locus tag: HDEF_0185
inference: COORDINATES: protein motif:HMM:NF024969.2
GO function: GO:0097367 - carbohydrate derivative binding [Evidence IEA]
GO process: GO:1901135 - carbohydrate derivative metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SIS domain-containing protein
translation: MRRMVELAFEIKKELESHSLKNFGAMLDENWRLKSQLANGITDPQIDDWYQKGMTHGAALGGKILGADNGRCILFFAPPETHDRIKKAMNDLQSIKFRFDRNGAQIRFLSTFRRTDIVTDKKNFNISDYLISHANLGKELNLNAFEAGIQLIKEKFFANKKIITCGNGGSASTASHYITDWNKMVNLATGKKFRGLSLCDNMGLITAFGNDLSYEDIFSGQLAAIADEGDLLVAISGSGNSSNILRAVEYANANNIDTLGVVGYDGGKLIHQAKYSVLVPTFDMQLCEDVHLMFGHMVMKALSIL
SIO_010081: HDEF_RS12365
subclass of: SO_0000673
so part of: HDEF_RS12365
location: complement(188314..189231)
location: region:188314-189231:-1
so has part: feature:188314-189231:-1:exon

WP_012737920.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:188314-189231:-1:exon

HDEF_RS12375
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS12375
so part of: sequence
location: complement(189686..189880)
location: region:189686-189880:-1
so has part: feature:189686-189880:-1:exon
subclass of: SO_0000010

66262049
type: Gene
SIO_000068: ncbigene

position:189686:-1
position: 189686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:189880:-1
position: 189880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:189686-189880:-1:exon

HDEF_RS12375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS12375
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIVSKTPLRMSFVGGGSDLPAFYREELGAVLSTSIDKYMYICVNKKFDAGIRINYSKTEEVDFP
SIO_010081: HDEF_RS12375
subclass of: SO_0000673
so part of: HDEF_RS12375
location: complement(189686..189880)
location: region:189686-189880:-1
so has part: feature:189686-189880:-1:exon

WP_171770458.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:189686-189880:-1:exon

HDEF_RS01030
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS01030
old locus tag: HDEF_0187
so part of: sequence
location: complement(189887..191788)
location: region:189887-191788:-1
so has part: feature:189887-191788:-1:exon
subclass of: SO_0000010

66260117
type: Gene
SIO_000068: ncbigene

position:189887:-1
position: 189887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:191788:-1
position: 191788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:189887-191788:-1:exon

HDEF_RS01030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS01030
old locus tag: HDEF_0187
inference: COORDINATES: protein motif:HMM:NF012695.2
GO function: GO:0016787 - hydrolase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HAD-IIIA family hydrolase
translation: MDCQVAILAGGLGTRLKSMMGSLPKPMVPILDKPVLEHQIELCKQHGFERIALLVHYQAAVIRSYFGDGSRWGVEIAYIEEADARGTAGALRDALHVLKDKFLVLYADTYADIDLKRLWQAGIETDAVGTLVAHPCDYSHHSDLLQLDEANYIKAIRPYPHPTDVCYENVSNAALFVLQKKYLIDFIPAQGQYDLVKDIIQSMITEGYKFKAYITLEYIKDTGTPERLKKVEQDLMSGLPERLSFRQQRVSVFLDRDGTLNKEVNYLSSAKQLELLPGAGQAVHRLNRAGYLAICVTNQSVLARGTATWEDMRQIHAHLDHLLGQDQAYLDRLYLCPHHPDSGFSGEIPELKKVCNCRKPNSGLLDQAIKELNIDRRPSWIIGDTTSDILAGQRAGVRTILLRTGHAGLDNKYPVIPDYICDDILSAVDWILSGHAYVVKRLMPVAIELQESRMMLMGGPSRSGKTMASQVLKELMEAMGRTVHVLPLDAWLKAKEQRREGGGVLSRYDLDRLISFLKTLLSTDKRVNLELPLWDRKKRERVSTRSLSIGPDDLLILEGVPALLHPALREMTPHRLHLDVSQKIRHQRMHFEYQWRGYDASEIDQCIASREEDEVPDVLAAAQYSRYSITFSD
SIO_010081: HDEF_RS01030
subclass of: SO_0000673
so part of: HDEF_RS01030
location: complement(189887..191788)
location: region:189887-191788:-1
so has part: feature:189887-191788:-1:exon

WP_012737921.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:189887-191788:-1:exon

HDEF_RS01035
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS01035
old locus tag: HDEF_0188
so part of: sequence
location: complement(191820..192620)
location: region:191820-192620:-1
so has part: feature:191820-192620:-1:exon
subclass of: SO_0000010

66260118
type: Gene
SIO_000068: ncbigene

position:191820:-1
position: 191820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:192620:-1
position: 192620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:191820-192620:-1:exon

HDEF_RS01035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS01035
old locus tag: HDEF_0188
EC number: 2.4.-.-
inference: COORDINATES: protein motif:HMM:NF021616.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase
translation: MQPLVSIIVPTFNESINVLEASLKSLFKQTFRNFECIVVDDSTDLALADFCKQLCLQDSRFIYVKQPNRLGLAASLNLALQKARGDWVARFDADDICMPDRLAQQIEFLSKNKDIDVLGGAVEIVDDSLNRLGFKFYPKAHNDIIKKSHFINPLAHPTVMFKRDLVLNLGGYDTTFKYAEDLELWLRLINKGIKFANLDKILIQYRQSTLNRAHVNWRFNLKARIKNFKLNYFIRRVSGIVMIGCWAFLPKKIYEFIYKALMLRPQ
SIO_010081: HDEF_RS01035
subclass of: SO_0000673
so part of: HDEF_RS01035
location: complement(191820..192620)
location: region:191820-192620:-1
so has part: feature:191820-192620:-1:exon

WP_012737922.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:191820-192620:-1:exon

HDEF_RS01040
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS01040
old locus tag: HDEF_0189
so part of: sequence
location: complement(192651..193637)
location: region:192651-193637:-1
so has part: feature:192651-193637:-1:exon
subclass of: SO_0000010

66260119
type: Gene
SIO_000068: ncbigene

position:192651:-1
position: 192651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:193637:-1
position: 193637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:192651-193637:-1:exon

HDEF_RS01040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS01040
old locus tag: HDEF_0189
inference: COORDINATES: protein motif:HMM:NF027681.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SDR family NAD(P)-dependent oxidoreductase
translation: MHNKKNIPISLVAGAAGFIGSHLCECLLNEGKRVVAVDNFSRGQKRYLERHVNNPDFKLLSADLSQRDDTSYTFEEAAKQGTISEVWHLAANSDISAGVADGDIDLKDTFLTTVEILKAMKLHCVRELYFASSSAIYGDLGDQQLHENIGPLMPISNYGAMKLASEALISASCEAELDKACVFRFPNVVGAPATHGVIYDFIHKLIANPECLEVLGNGTQQKAYLHVSDLISAMIAFRARTDTSKREVINIGPIDTGVTVKWIAEQVVSRINPLAQIKYGKGNKGWIGDVPKFHYSTEKLQSYGWQPKLGSAEAVRSAINEIADQLGQ
SIO_010081: HDEF_RS01040
subclass of: SO_0000673
so part of: HDEF_RS01040
location: complement(192651..193637)
location: region:192651-193637:-1
so has part: feature:192651-193637:-1:exon

WP_012737923.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:192651-193637:-1:exon

HDEF_RS01045
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: galE
locus tag: HDEF_RS01045
old locus tag: HDEF_0190
so part of: sequence
location: complement(193809..194855)
location: region:193809-194855:-1
so has part: feature:193809-194855:-1:exon
subclass of: SO_0000010

66260120
type: Gene
SIO_000068: ncbigene

position:193809:-1
position: 193809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:194855:-1
position: 194855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:193809-194855:-1:exon

HDEF_RS01045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: galE
locus tag: HDEF_RS01045
old locus tag: HDEF_0190
EC number: 5.1.3.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004265179.1
GO function: GO:0003978 - UDP-glucose 4-epimerase activity [Evidence IEA]
GO process: GO:0006012 - galactose metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UDP-glucose 4-epimerase GalE
translation: MNNVKVLVTGGLGYIGSHTCVQMIEQGVQPVILDNLCNANPEVLNRIETITGTRPTFYEGDVRDKSIIDAIFTQHNITSVLHFAGLKAVGESVQKPIEYYDNNVYGTLVLVQCMQKAGVKSLIFSSSATVYGDPEKVPLTEQSKVGATTNPYGTSKYMVERVLTDLHITHDECSITLLRYFNPVGAHQSGLIGEDFQGIPNNLMPYIAQVAVGRYKEVMVFGVDYPTLDGTGVRDYIHVMDLADAHITALNHVSQKPGLHIYNLGTGKGTSVLEMIAAFEQVVGKTIQYKIVGRRSGDIAECWSSPAKAFQDLGWKAKYSLQEMVDDSWRWQSQNPNGYSTVENINLL
SIO_010081: HDEF_RS01045
subclass of: SO_0000673
so part of: HDEF_RS01045
location: complement(193809..194855)
location: region:193809-194855:-1
so has part: feature:193809-194855:-1:exon

WP_012737924.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:193809-194855:-1:exon

HDEF_RS01050
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS01050
old locus tag: HDEF_0191
so part of: sequence
location: complement(195352..196530)
location: region:195352-196530:-1
so has part: feature:195352-196530:-1:exon
subclass of: SO_0000010

66260121
type: Gene
SIO_000068: ncbigene

position:195352:-1
position: 195352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:196530:-1
position: 196530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:195352-196530:-1:exon

HDEF_RS01050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS01050
old locus tag: HDEF_0191
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MISIKIGSGKSIDAEVVNSCLFYDKLTLEFSFPDGSVIKSSLLPNRVSFTKNKKLINEKITLFEKRFNQKIKIINPKRILFIEYFLYYFCLILKNIFVKFFMPNQWVIAYRKIGNKDWKIIEFKKNELMADPFIYYCDNKYYLFYEGLNYDVDRGYICAGELDTEKNKIINIKKIINESYHLSFPYIFEINSELYMVPESSNNHTVDLYKCNEFPYKWDKVKTLIGNIEAVDTVLIKNENMWYLLTSEKVYGASYGDELTIFISEDPLKKPFRRISDMPAVHDIALARNAGSIYVSKAGNLYRVSQDCSRRYGFKVNIMKITQLSEKYKYREELISKFDLPKNAIAMHTYNFAHEIEITDLKIINKDIASLLRNARRIFKKIWASIRSRIIS
SIO_010081: HDEF_RS01050
subclass of: SO_0000673
so part of: HDEF_RS01050
location: complement(195352..196530)
location: region:195352-196530:-1
so has part: feature:195352-196530:-1:exon

WP_012737925.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:195352-196530:-1:exon

HDEF_RS01055
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS01055
old locus tag: HDEF_0192
so part of: sequence
location: complement(196688..197350)
location: region:196688-197350:-1
so has part: feature:196688-197350:-1:exon
subclass of: SO_0000010

66260122
type: Gene
SIO_000068: ncbigene

position:196688:-1
position: 196688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:197350:-1
position: 197350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:196688-197350:-1:exon

HDEF_RS01055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS01055
old locus tag: HDEF_0192
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: peptidoglycan bridge formation glycyltransferase FemA/FemB family protein
translation: MHILECHYHDNIRLLYNDLIKKSEYDILKCYQVDTQLPNLQKFYTLQINLNENLNDIFKKFAKNTRNEINKCYRDDKLLFLINEKINQKDIVEFIILFNKFNKFKNLGTNVNELEKSLVRKKENIAFFKAVKDNRIVVFNVYFVDNNRARLKCSVSLRGEDGKERNLIGRANRTLHFEAISFFKEKGYKLYDMGGVSLTEDKMGIDSFKSKFGGILFTEW
SIO_010081: HDEF_RS01055
subclass of: SO_0000673
so part of: HDEF_RS01055
location: complement(196688..197350)
location: region:196688-197350:-1
so has part: feature:196688-197350:-1:exon

WP_012737926.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:196688-197350:-1:exon

HDEF_RS01060
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS01060
old locus tag: HDEF_0193
so part of: sequence
location: complement(197742..198764)
location: region:197742-198764:-1
so has part: feature:197742-198764:-1:exon
subclass of: SO_0000010

66260123
type: Gene
SIO_000068: ncbigene

position:197742:-1
position: 197742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:198764:-1
position: 198764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:197742-198764:-1:exon

HDEF_RS01060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS01060
old locus tag: HDEF_0193
inference: COORDINATES: protein motif:HMM:NF024860.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sulfotransferase
translation: MLGPKVITCTGYGGTGSSVVSDLLKEFSNVCSFGNFEFRFLHDPHGLRDLDYGIVQNNNRLTTSYHINNYIKYINFLSKSNVYPYENFFNKKFKKITNEYLRNIINIEWNGFFHQDVISDTSIKKFIYYLERFYQKKILGMKEGGAKIYGKIFNKKMYYSYPREKFYIETRKYLRNLINASNYDLKEYVIFDQLVPPNNTHHYLKYFDDLKIIVIDRDPRDLYLLNKCLWNEKWIPTENIHDYINWFKILREHQKFDQEDKKSVLRLPFEDFIYKYDQTVQKVCDFCCLKSIKHTNKYKYFDPKISKDNTNLKSKYSKYNIEIASIETELVEFCYNFLYK
SIO_010081: HDEF_RS01060
subclass of: SO_0000673
so part of: HDEF_RS01060
location: complement(197742..198764)
location: region:197742-198764:-1
so has part: feature:197742-198764:-1:exon

WP_012737927.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:197742-198764:-1:exon

HDEF_RS01065
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: tagD
locus tag: HDEF_RS01065
old locus tag: HDEF_0194
pseudo: true
so part of: sequence
location: complement(<198858..199235)
location: region:198858-199235:-1
so has part: feature:198858-199235:-1:exon
subclass of: SO_0000010

66260124
type: Gene
SIO_000068: ncbigene

position:198858:-1
position: 198858
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:199235:-1
position: 199235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:198858-199235:-1:exon

HDEF_RS01065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: tagD
locus tag: HDEF_RS01065
old locus tag: HDEF_0194
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002465978.1
GO function: GO:0047348 - glycerol-3-phosphate cytidylyltransferase activity [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: glycerol-3-phosphate cytidylyltransferase
SIO_010081: HDEF_RS01065
subclass of: SO_0000673
so part of: HDEF_RS01065
location: complement(<198858..199235)
location: region:198858-199235:-1
so has part: feature:198858-199235:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:198858-199235:-1:exon

HDEF_RS01075
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS01075
old locus tag: HDEF_0196
so part of: sequence
location: complement(200298..201395)
location: region:200298-201395:-1
so has part: feature:200298-201395:-1:exon
subclass of: SO_0000010

66260126
type: Gene
SIO_000068: ncbigene

position:200298:-1
position: 200298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:201395:-1
position: 201395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:200298-201395:-1:exon

HDEF_RS01075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS01075
old locus tag: HDEF_0196
EC number: 2.4.-.-
inference: COORDINATES: protein motif:HMM:NF012744.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase
translation: MKNRIKKLVFLTESMVSAGGVVRVISLWANYFSQMGFNCKILSVIPGKAYFGLEKNINFKIKKYIFKNKILALPINLLLILPILKEAKSSYLIVNKSAYIEPIYFWRKLGFFKNIKLVYFSHGGNNEFETFYMSRRTTKHRVRMIFDVFDDVVCLFKNTDTTPDVVKDEKIKFIFNPCPIPTYIRAANEYDKVVIFVGRVTKKKGVDDLIKAWKIIEPKHKNWKLQIVGDGSDKEECISLAQNLELKNISFYESTNDIVKYLRRSTISILPSLFEGMGLSILEAKSQGCAVISTKTSGGKKLINDMINGILVDISNVQELANKIDLLINDENLRNRIIRQAYSEMNVFDISSIAKSWSQVFKDDI
SIO_010081: HDEF_RS01075
subclass of: SO_0000673
so part of: HDEF_RS01075
location: complement(200298..201395)
location: region:200298-201395:-1
so has part: feature:200298-201395:-1:exon

WP_012737930.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:200298-201395:-1:exon

HDEF_RS01080
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS01080
old locus tag: HDEF_0197
so part of: sequence
location: complement(201399..202553)
location: region:201399-202553:-1
so has part: feature:201399-202553:-1:exon
subclass of: SO_0000010

66260127
type: Gene
SIO_000068: ncbigene

position:201399:-1
position: 201399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:202553:-1
position: 202553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:201399-202553:-1:exon

HDEF_RS01080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS01080
old locus tag: HDEF_0197
inference: COORDINATES: protein motif:HMM:NF016357.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CDP-glycerol--poly(glycerophosphate) glycerophosphotransferase
translation: MKYLFNYIFCFFLPLLYRPKKKLVIFTFDKNNIKFNSKALFEYSLKKNIFDVRYIINDDKLRKKLILKYGDKFLTTKKIKDIIIISNAKVWVTDGSFPLKTPFGHKIRILINLWHGIPLKKVGIMGYSGLQKLRIFLTLKMFAKHYNLFSTTSSNLSSIYSKSFLINDKKIKPFGQPRNDSLFVSHYSINDYISDLPKYERIILYAPTWRVGLYGNDWVGEDTKFFPFSDFNQDILEEYLKKNNILLCLRPHHLQKIEIKNSEWIKNFSSDVCNEVMDVIAKFDLLVTDYSSIYFDFLILNKPVLFLPYDLKLYENNVGLNFDYQNVTPGPKPTSQSEFIYEISKLLDDESYYKTERHKTNNFFNEIKYGSCQKIHKFIIENLD
SIO_010081: HDEF_RS01080
subclass of: SO_0000673
so part of: HDEF_RS01080
location: complement(201399..202553)
location: region:201399-202553:-1
so has part: feature:201399-202553:-1:exon

WP_012737931.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:201399-202553:-1:exon

HDEF_RS01085
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS01085
old locus tag: HDEF_0198
so part of: sequence
location: complement(202609..202803)
location: region:202609-202803:-1
so has part: feature:202609-202803:-1:exon
subclass of: SO_0000010

66260128
type: Gene
SIO_000068: ncbigene

position:202609:-1
position: 202609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:202803:-1
position: 202803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:202609-202803:-1:exon

HDEF_RS01085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS01085
old locus tag: HDEF_0198
inference: COORDINATES: protein motif:HMM:NF016852.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LicD family protein
translation: MTIEKSVLRQAQLLLLEGLKEIDRICNKHNINCWIDSGTLLGAKRHGGFIPWDDDIDILTLLFE
SIO_010081: HDEF_RS01085
subclass of: SO_0000673
so part of: HDEF_RS01085
location: complement(202609..202803)
location: region:202609-202803:-1
so has part: feature:202609-202803:-1:exon

WP_012737932.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:202609-202803:-1:exon

HDEF_RS01095
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS01095
old locus tag: HDEF_0200
so part of: sequence
location: complement(203703..204452)
location: region:203703-204452:-1
so has part: feature:203703-204452:-1:exon
subclass of: SO_0000010

66260129
type: Gene
SIO_000068: ncbigene

position:203703:-1
position: 203703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:204452:-1
position: 204452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:203703-204452:-1:exon

HDEF_RS01095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS01095
old locus tag: HDEF_0200
EC number: 2.1.-.-
inference: COORDINATES: protein motif:HMM:NF025217.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: class I SAM-dependent methyltransferase
translation: MKYTTCNDEDVSKLEVKPFYDDSSVNSLNIHFNNTEIEERENNEFAILKKIFNSYDIKASRIINPGCGTGYACSLAIRLNLNYVGIDFSSQQIALANSLVNKNERIKFINDNFLNISNYLKNGDFVLIQFLLQFFLDKELDLIFKKISKNYKGYLFIEEGVSTLKNRIIIKDHDMKIGHFYNTQYRTIHDFLEIFSKYFFVLEYDFILQNIKTERIDTKYMYFVLKNMFILSILLLLIKESEKYEITFK
SIO_010081: HDEF_RS01095
subclass of: SO_0000673
so part of: HDEF_RS01095
location: complement(203703..204452)
location: region:203703-204452:-1
so has part: feature:203703-204452:-1:exon

WP_012737933.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:203703-204452:-1:exon

HDEF_RS01100
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS01100
old locus tag: HDEF_0201
so part of: sequence
location: complement(204471..205562)
location: region:204471-205562:-1
so has part: feature:204471-205562:-1:exon
subclass of: SO_0000010

66260130
type: Gene
SIO_000068: ncbigene

position:204471:-1
position: 204471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:205562:-1
position: 205562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:204471-205562:-1:exon

HDEF_RS01100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS01100
old locus tag: HDEF_0201
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857283.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aminotransferase class V-fold PLP-dependent enzyme
translation: MLLLNPGPVTLTEYVRNSLLQPDLCHRESEFFDLQDEIKKRILAIYELDPAQWAAILITGSGTAAVESMLAGLVPETGRLLIVENGVYGERIAQISAQYGIMYKRIVGDWMQGLNLDVITSELDSTLKDQRFSHLAVVHHETTTGRLNDLPSLSKLCCERGVKLLVDAVSSFGAEQLNFSDESLIGIAATANKCLHAVPGVSFVVVRRTAICQATSRTYYLDLKRLIHLQDQRDTPFTPAIHAYYSLAAALCELEEQGGRRTRYQNYSALSEQVLIGMKALGIEPVVPISQSSVVLRAYHLPTGLTYAKLHDALKAEGFVIYAGQRDLSKTLFRISTMGDLNSADIDRLLKGVAKVINELKIY
SIO_010081: HDEF_RS01100
subclass of: SO_0000673
so part of: HDEF_RS01100
location: complement(204471..205562)
location: region:204471-205562:-1
so has part: feature:204471-205562:-1:exon

WP_012737934.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:204471-205562:-1:exon

HDEF_RS01105
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: aepY
locus tag: HDEF_RS01105
old locus tag: HDEF_0202
so part of: sequence
location: complement(205562..206749)
location: region:205562-206749:-1
so has part: feature:205562-206749:-1:exon
subclass of: SO_0000010

66260131
type: Gene
SIO_000068: ncbigene

position:206749:-1
position: 206749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:205562-206749:-1:exon

HDEF_RS01105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: aepY
locus tag: HDEF_RS01105
old locus tag: HDEF_0202
EC number: 4.1.1.82
inference: COORDINATES: protein motif:HMM:TIGR03297.1
GO function: GO:0033980 - phosphonopyruvate decarboxylase activity [Evidence IEA]
GO process: GO:0017000 - antibiotic biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphonopyruvate decarboxylase
translation: MIEAHQFVEAARERGFDWYAGVPCSYLTPFINYVLQEPSLRYVSVANEGDAVALIAGVALSGATGLSHRRGIAMMQNSGLGNAVSPLTSLTWTFRLPQLLIVTWRGQPGVADEPQHALMGPITPAILEKMEIPWELFPTEPDAIVPALDRSIAHMDKTGRPYALVMQKGSVASYPLKSSMAVVSTNKTTSCVFSKWRGLEPIFRPSQYQALQKVIEKTPTTSTVVFASTGFCGRVLYAIDDRPNQLYMVGSMGCVVPLALGFALARPDLRVVILDGDGAALMRMGAFATVGAYGLSNIQHLLLDNGVHNSTGGQATVSPHLSFAGVATACGYASSLETDDIEEIDTWLSSVPSAGPRFACLLTRIAMPKNLPRPSMTPVDVKTRLMRHIAVTGAN
SIO_010081: HDEF_RS01105
subclass of: SO_0000673
so part of: HDEF_RS01105
location: complement(205562..206749)
location: region:205562-206749:-1
so has part: feature:205562-206749:-1:exon

WP_012737935.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:205562-206749:-1:exon

HDEF_RS01110
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: aepX
locus tag: HDEF_RS01110
old locus tag: HDEF_0203
so part of: sequence
location: complement(206746..208467)
location: region:206746-208467:-1
so has part: feature:206746-208467:-1:exon
subclass of: SO_0000010

66260132
type: Gene
SIO_000068: ncbigene

position:206746:-1
position: 206746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:208467:-1
position: 208467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:206746-208467:-1:exon

HDEF_RS01110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: aepX
locus tag: HDEF_RS01110
old locus tag: HDEF_0203
EC number: 5.4.2.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857285.1
GO function: GO:0050188 - phosphoenolpyruvate mutase activity [Evidence IEA]
GO process: GO:0019634 - organic phosphonate metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphoenolpyruvate mutase
translation: MSTLSPSYTIDSTNKIPLTHSAQLRQMLLSDELEFLMEAHNGLSARIVREAGFRGIWASGLSISAQFGVRDNNEVSWTQVVDMLEFMVDASNLPILLDGDTGYGNFNNMRRLVRKLEQRGVAGVCIEDKQFPKTNSFINGERQPLADIEEFVGKIKAGKDTQTDSNFSIVARVEALIAGWGMDEALRRAEAYRLAGADAILIHSKLSKSDEIVAFAREWADRGTPLVIVPTRYYSTATDVFRQAGISTVIWANHSVRSAVSAMQSVVKEIYETQTLINVEDRIASVNEIFRLQNAAEYTAAEKIYLSASSSPRVGLVLAASRGARELEPITHDRPKVMLPIAGKSLLRWLVDGFKKEGINDITVVGGYRAENIDNAGIRLVVNQNYATTGELVSLTCAIDKINSEVTICYGDLLFRHYVLRDLLENTAEFCVVVDSSQTSADNRTVRNFVYCTEKDNRGMLGQKVLLKHVTNDLNAVPYEDPLVQGRWIGLLNVSGKGLNRLKIVLTNLRMQPEFNTFGMPELLNALIADGAAIEVLYIHGHWRSVNDLNDFTNAQTPLKNTENLSYKPEIDQ
SIO_010081: HDEF_RS01110
subclass of: SO_0000673
so part of: HDEF_RS01110
location: complement(206746..208467)
location: region:206746-208467:-1
so has part: feature:206746-208467:-1:exon

WP_012737936.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:206746-208467:-1:exon

HDEF_RS01115
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS01115
old locus tag: HDEF_0204
so part of: sequence
location: complement(208467..209231)
location: region:208467-209231:-1
so has part: feature:208467-209231:-1:exon
subclass of: SO_0000010

66260133
type: Gene
SIO_000068: ncbigene

position:209231:-1
position: 209231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:208467-209231:-1:exon

HDEF_RS01115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS01115
old locus tag: HDEF_0204
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857286.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphocholine cytidylyltransferase family protein
translation: MRAVILAAGQGLRLQQPKQEQIPKCLLQFDGKTLLERHLILLKSVGVYDVTLALGFRHELIEAEIKRLNWQPSPETFVNSSFDLGSVLTVHTVTDAVTRGGDVLLMDADVLCDIDILSALVANNQSINRLLIDYNFEEGEEPVKLCIRDGIPVELRKKLSVDLKYDTVGESVGFFRFDESAAQRFATIVREYIDSNRAHMPHEEAVRDLLQEYNHIFEVRDITGAPWMEIDFPKDIIRAKNEILPQLKPLLGVV
SIO_010081: HDEF_RS01115
subclass of: SO_0000673
so part of: HDEF_RS01115
location: complement(208467..209231)
location: region:208467-209231:-1
so has part: feature:208467-209231:-1:exon

WP_012737937.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:208467-209231:-1:exon

HDEF_RS01120
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS01120
old locus tag: HDEF_0205
so part of: sequence
location: complement(209277..210782)
location: region:209277-210782:-1
so has part: feature:209277-210782:-1:exon
subclass of: SO_0000010

66260134
type: Gene
SIO_000068: ncbigene

position:209277:-1
position: 209277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:210782:-1
position: 210782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:209277-210782:-1:exon

HDEF_RS01120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS01120
old locus tag: HDEF_0205
inference: COORDINATES: protein motif:HMM:NF015013.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lipid II flippase MurJ
translation: MKQESFHKSINASIFWRGLARLSGLTKHIIIAAMIGLNAQLDVFFMATVLLGILVFSWGEIADVMSVPHMVKTWKNGQKEEFKKIASGYMSFIFLGSLLLAFMVYLFSHQLSLLPIGFNPERKKLLAQSLPWLLPAIILYVPFRHMGAVLRSVRQFSPLYQGEFLLSLITMLCIVCFYHYPNVLFWSYSMGVTGAFLYLLCRTWRFVLPLSNPFSFIVRQSLVLAPGLMILQGTQYFYTFTDQLFVSFLTVGMVSALFYAVSITYVLPGLMGLENTFITVIAEQSDKKERVKKMDDLLALVIYVGFGATLLMIVAGKAIVALLLERGLFTVADTESVSIALMAYSGVILPFFLNKPFDQIFQVERKIRLMVWRTLLGLIANVILNSVFLFIFHWGIFGVALATSISYWVMMLASLQGLRKIGYEFDLLRALKWSSWLLLFLVFAYFGCQSIPQYFTHPIFVLISCALLIGLTLLLAGLIYQGKERVLIIAVIRRYKKFEFI
SIO_010081: HDEF_RS01120
subclass of: SO_0000673
so part of: HDEF_RS01120
location: complement(209277..210782)
location: region:209277-210782:-1
so has part: feature:209277-210782:-1:exon

WP_012737938.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:209277-210782:-1:exon

HDEF_RS01125
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: hemH
locus tag: HDEF_RS01125
old locus tag: HDEF_0207
so part of: sequence
location: complement(210977..211936)
location: region:210977-211936:-1
so has part: feature:210977-211936:-1:exon
subclass of: SO_0000010

66260135
type: Gene
SIO_000068: ncbigene

position:210977:-1
position: 210977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:211936:-1
position: 211936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:210977-211936:-1:exon

HDEF_RS01125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: hemH
locus tag: HDEF_RS01125
old locus tag: HDEF_0207
EC number: 4.98.1.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012737940.1
GO function: GO:0004325 - ferrochelatase activity [Evidence IEA]
GO process: GO:0006779 - porphyrin-containing compound biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ferrochelatase
translation: MVKSKLGVLLVNLGTPDAPTVPAIKRYLKQFLSDRRVIDTPPILWWPLLRGIVLPFRSRRVAKLYQSIWMPEGSPLLVYSDRQQKALAARLPDASVELAMSYGSPSLGDAINRLITQGIIKLVILPLYPQYSATTCGSVWDAVSGILKKYRSLPSIYFIRDYAQHPSYINALKQSVARYFEKHGQPDKLLLSFHGIPQRYVRLGDDYPKRCEDTYRALSTALGLHNNKIMMTYQSRFGWEPWLTPYTDKTLKSLPAKGIKHIQVLCPGFSADCLETLEEIKEQNKEIFLKAGGKKFEYIPALNDSPEQIDLLEQLVSLG
SIO_010081: HDEF_RS01125
subclass of: SO_0000673
so part of: HDEF_RS01125
location: complement(210977..211936)
location: region:210977-211936:-1
so has part: feature:210977-211936:-1:exon

WP_012737940.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:210977-211936:-1:exon

HDEF_RS01130
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: accA
locus tag: HDEF_RS01130
old locus tag: HDEF_0208
so part of: sequence
location: complement(212091..213050)
location: region:212091-213050:-1
so has part: feature:212091-213050:-1:exon
subclass of: SO_0000010

66260136
type: Gene
SIO_000068: ncbigene

position:212091:-1
position: 212091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:213050:-1
position: 213050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:212091-213050:-1:exon

HDEF_RS01130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: accA
locus tag: HDEF_RS01130
old locus tag: HDEF_0208
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019455765.1
GO component: GO:0009317 - acetyl-CoA carboxylase complex [Evidence IEA]
GO function: GO:0003989 - acetyl-CoA carboxylase activity [Evidence IEA]
GO process: GO:0006633 - fatty acid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acetyl-CoA carboxylase carboxyl transferase subunit alpha
translation: MNLNFLDFEQPIVELEAKIDSLTAINRQDNPLNIDLDEEIQKLRDKSIQLTHKIFSHLSAWQIAQLARHPNRPYTLDYIEHIFTDFEELAGDRHYGDDKAIVGGIARLNQKPVMVIGHQKGRETKEKIRRNFGMPSPEGYRKALRLMEMAERFRLPLLTFIDTPGAYPGVGAEERGQSEAIARNLREMSRLKTPIICTVIGEGGSGGALAIAVGDVVNMLQYSTYSVISPEGCASILWKSADKASVAAETMGITAHRLKELKMIDTVLPEPLGSAHRDPKAMAESLKERLIKDLEYLKQFDSLKLLDRRYEKLMSYGYC
SIO_010081: HDEF_RS01130
subclass of: SO_0000673
so part of: HDEF_RS01130
location: complement(212091..213050)
location: region:212091-213050:-1
so has part: feature:212091-213050:-1:exon

WP_044612432.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:212091-213050:-1:exon

HDEF_RS01135
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: dnaE
locus tag: HDEF_RS01135
old locus tag: HDEF_0209
so part of: sequence
location: complement(213069..216551)
location: region:213069-216551:-1
so has part: feature:213069-216551:-1:exon
subclass of: SO_0000010

66260137
type: Gene
SIO_000068: ncbigene

position:213069:-1
position: 213069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:216551:-1
position: 216551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:213069-216551:-1:exon

HDEF_RS01135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: dnaE
locus tag: HDEF_RS01135
old locus tag: HDEF_0209
EC number: 2.7.7.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009114133.1
GO function: GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA polymerase III subunit alpha
translation: MTDPRFIHLSVHSDYSMIDGLTKIKPLVQKAAALGMPALALTDFSNFCGLVKFYGAAHKVGIKPIIGADFYVQNPALENNFARLTLLARNQEGYHNITLLISAAYQRGYGSLGPVIDRHWLIKHKEGLILLSGAKMGDLGQFILRENQSQIDQCLHFYQTHFPDNYYIELTRTGRADEESYLHSAINIAEKHGIPVVATNHVRFMDPSDFDAHEIRVAINAGFTLADPKRPQNYSPQQFMRSEQDMCELFSDIPEALTNSVEIAKRCNLNLRLGEYFFPKYPTGKMSTEDFLIARSQEGLGKRLEFLFSDPEIRKQKREAYDQRLALELQVINEMGFPGYFLIVMEFIQWAKDNHIPVGPGRGSGAGSLVAYALQITDIDPLEFDLLFERFLNPERISLPDFDVDFCMEKRDAVIEHVADMYGRESVSQIITFGTMAAKAVIRDVGRVLGHPYSFVDRIAKLIPLDLGMTLEKAFVAEPELTKAYEADEEVRSLLDMARKLEGVTRNAGKHAGGVVIAPTKMTDFAPLYCDSQGQNPVTQFDKNDIEYVGLVKFDFLGLRTLTVIHKAVEMINQRIITQGAQPIDISLIPLNDPKSFEVLQRSETTAIFQLESKGMKDLIKRLKPDCFEDIIALVALFRPGPLQSGMVDNFIDRKQGRETISYPDIEWQHPCLQPVLEPTYGIILYQEQVMQIAQVLSGYSLGEADILRRAMGKKDPVEMAKQRSIFENGAKEKGIDGQLAIKIFDLVEKFAGYGFNKSHSAAYALLSYQTLWLKTHYPAEFMAAVMTADMDNTDKIVGLVDECARMGLTMLPPDINSGFYHFHVNAQGKIVYGMGAIKGVGEGAIESILEARRQGGEFKDLFDFCARTAKKKLNRRILEKLIFSGALDRLGPHRAALMHALQNAIKAAEQHAKAELTGQADMFGVLTQDPKKIEQSYAQVPPWQQQTVLDGERETLGLYLTGHPITQYLKEIRHYVGSSRLQDLSPTPRGKNVTVAGFVVSAKVMTTKRGARIGLCKLDDRSAHLDIMLFNDAFEKYQHLLQKDLILIARGQISFDDFNNGLKMTAHELMDISEAREKHVRALAISVSHTQVNKVFFDKLRDILEPCRSGSVKIHFYYQGKNASAKLRFGTDWHITPTNRLLIDLRNLIGHQQVQLEFD
SIO_010081: HDEF_RS01135
subclass of: SO_0000673
so part of: HDEF_RS01135
location: complement(213069..216551)
location: region:213069-216551:-1
so has part: feature:213069-216551:-1:exon

WP_012737942.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:213069-216551:-1:exon

HDEF_RS01140
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: queE
locus tag: HDEF_RS01140
old locus tag: HDEF_0210
so part of: sequence
location: complement(216583..217254)
location: region:216583-217254:-1
so has part: feature:216583-217254:-1:exon
subclass of: SO_0000010

66260138
type: Gene
SIO_000068: ncbigene

position:216583:-1
position: 216583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:217254:-1
position: 217254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:216583-217254:-1:exon

HDEF_RS01140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: queE
locus tag: HDEF_RS01140
old locus tag: HDEF_0210
EC number: 4.3.99.3
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015670966.1
GO function: GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO process: GO:0006400 - tRNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 7-carboxy-7-deazaguanine synthase QueE
translation: MLYPINEIFQTLQGEGHFMGTPAIFIRLQGCPVGCSWCDTKHTWEKKNEQQVDLFSILQKKTANDFWSHSGEQNLLAVIRAQGYQASHVVITGGEPCLYDLTPLTQLLEQEGYFCQIETSGTHLVHCTPSCWVTVSPKINMRGGFKIQHQALERADELKHVVARKSDIETLDALIGNLKDRKKRIISLQPVSQKKSATQLCIDTCIERNWRLSVQMHKYLGIE
SIO_010081: HDEF_RS01140
subclass of: SO_0000673
so part of: HDEF_RS01140
location: complement(216583..217254)
location: region:216583-217254:-1
so has part: feature:216583-217254:-1:exon

WP_012737943.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:216583-217254:-1:exon

HDEF_RS01145
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: crl
locus tag: HDEF_RS01145
old locus tag: HDEF_0211
so part of: sequence
location: 217831..218244
location: region:217831-218244:1
so has part: feature:217831-218244:1:exon
subclass of: SO_0000010

66260139
type: Gene
SIO_000068: ncbigene

position:217831:1
position: 217831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:218244:1
position: 218244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:217831-218244:1:exon

HDEF_RS01145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: crl
locus tag: HDEF_RS01145
old locus tag: HDEF_0211
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857290.1
GO process: GO:0045893 - positive regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sigma factor-binding protein Crl
translation: MPLINAHPKCKLMKCFAALGPYLRESQCQKDYFFFDCLAICVDIKLAPEKRQFWGWWLELRPEDKCFIYTYQFGLYTQDEQWMVKKIKAADIQQKLETTFIDFYERLNEMLASIDCELRLESNINVLPNMTRLLVSQ
SIO_010081: HDEF_RS01145
subclass of: SO_0000673
so part of: HDEF_RS01145
location: 217831..218244
location: region:217831-218244:1
so has part: feature:217831-218244:1:exon

WP_012737944.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:217831-218244:1:exon

HDEF_RS01150
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS01150
old locus tag: HDEF_0212
so part of: sequence
location: complement(218398..220014)
location: region:218398-220014:-1
so has part: feature:218398-220014:-1:exon
subclass of: SO_0000010

66260140
type: Gene
SIO_000068: ncbigene

position:218398:-1
position: 218398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:220014:-1
position: 220014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:218398-220014:-1:exon

HDEF_RS01150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS01150
old locus tag: HDEF_0212
EC number: 6.3.5.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857291.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003952 - NAD+ synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO process: GO:0009435 - NAD biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NAD+ synthase
translation: MSRSLSIALAQLNFCVGDIKGNTELILNVLQEQKNQADLVLFSELALSGYPPEDWLFRDDFYHSCETQLLRLQKASHEVSFLLGHPFREKDRLYNALSVFSEGKLLARYYKQCLPNHGVFDEARYFSSGKTTQILAFKGYRLGLLICEDLWHEGPVDSAKAAGAEILLSINASPYDQKKYQRRQNMLSQHCLRTDLPLIYLNQVGGQDELIFDGRSQVLNKTGETVLELPAFSEKTLLCEWTETRIKTKSLKVNPPEPFAEEYQALVMALRDYVQKNGFQGVLMGLSGGIDSALTLAIAVDALGKSKVRAYMMPSRYTPSDSVMYAQTQAKHLGVTFEILSIEPIFEAFLSSLKGLLKEDLKDITKENLQARCRGMLLMGLSNQLGDLVLTTSNKSETAVGYSTLYGDMAGGFNVLKDVPKTWVFSLAKYRNTLSEVIPKKVISRPPSAELKPNQLDTDSLPPYAILDAILEGYVERDRSVVSLIEEGFEEEVVRHVISLVDRNEYKRRQSPVGPRITARNFSKDRRYPITSGFSHNK
SIO_010081: HDEF_RS01150
subclass of: SO_0000673
so part of: HDEF_RS01150
location: complement(218398..220014)
location: region:218398-220014:-1
so has part: feature:218398-220014:-1:exon

WP_012737945.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:218398-220014:-1:exon

HDEF_RS01155
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: tilS
locus tag: HDEF_RS01155
old locus tag: HDEF_0213
so part of: sequence
location: complement(220115..221488)
location: region:220115-221488:-1
so has part: feature:220115-221488:-1:exon
subclass of: SO_0000010

66260141
type: Gene
SIO_000068: ncbigene

position:220115:-1
position: 220115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:221488:-1
position: 221488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:220115-221488:-1:exon

HDEF_RS01155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: tilS
locus tag: HDEF_RS01155
old locus tag: HDEF_0213
EC number: 6.3.4.19
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012737946.1
GO function: GO:0016879 - ligase activity, forming carbon-nitrogen bonds [Evidence IEA]
GO process: GO:0006400 - tRNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA lysidine(34) synthetase TilS
translation: MKKMASFSLTTLLKNLGKHHKFLVAFSGGLDSTVLLHGLLSLRDQNHLKLNIRAIHTHEKLIHRPENWSKDADQRLTHCQSQCEQWKVPLEVVKMEVEPRGKGIEAAARTVRYQIFSNALKKDEVLLTGHHQNDQCETVLLALKRGSGPAGLSGMPLAMPLGQSQLLRPQLSFSRHSLQLYALEKGILWMEDEDNQNDRFDRNFLRRHILPLLTARWPHFLESTSRSAALCAEQETLLDELLSEQLCQLQSQEGTLSIQGLAACSEVKRNALLRRWLDSKKVPMPSRDQLARLWKEVALAKSDAQPYLQCGEYQIRRFREHLYLFKSSKKSQPCPALFSIKWPFTPESENKLVLPDHLGELKCTPYRSEGQVIRAPQKNEVISIRFGLTGNIKILGRDRSRHSKKLWQELGIPPWERKRIPLLYFNETLIAAAEVFVTQKGEAKQGEPHCYLEWVKS
SIO_010081: HDEF_RS01155
subclass of: SO_0000673
so part of: HDEF_RS01155
location: complement(220115..221488)
location: region:220115-221488:-1
so has part: feature:220115-221488:-1:exon

WP_012737946.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:220115-221488:-1:exon

HDEF_RS01160
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS01160
old locus tag: HDEF_0214
so part of: sequence
location: complement(221736..222491)
location: region:221736-222491:-1
so has part: feature:221736-222491:-1:exon
subclass of: SO_0000010

66260142
type: Gene
SIO_000068: ncbigene

position:221736:-1
position: 221736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:222491:-1
position: 222491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:221736-222491:-1:exon

HDEF_RS01160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS01160
old locus tag: HDEF_0214
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013357679.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF481 domain-containing protein
translation: MKKFKKLSELLLVSTSSFLSQTAFAEGIFTSMDDPSTATKPFEATASAGFLAQTGNSKSSSLSVAANMTWFKQSMAYSFWGNAANNSSQDQRSSETYLLGARARYNLTPEHYLFSQASWLSDRFNGYKGRSIFTLGYGHQILSGPIHTLRAEVGPTVRYDQYSAGGNKKNLMLYGGLGYQWQMTQTTQFIQALSILAGENTTITSETGLQLAINEQLSLKLVYNVNWNKTPPASAPKKIDTKTSILLSYSL
SIO_010081: HDEF_RS01160
subclass of: SO_0000673
so part of: HDEF_RS01160
location: complement(221736..222491)
location: region:221736-222491:-1
so has part: feature:221736-222491:-1:exon

WP_012737947.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:221736-222491:-1:exon

HDEF_RS01170
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS01170
old locus tag: HDEF_0217
so part of: sequence
location: complement(223003..224250)
location: region:223003-224250:-1
so has part: feature:223003-224250:-1:exon
subclass of: SO_0000010

66260143
type: Gene
SIO_000068: ncbigene

position:223003:-1
position: 223003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:224250:-1
position: 224250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:223003-224250:-1:exon

HDEF_RS01170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS01170
old locus tag: HDEF_0217
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSIISNIHNKFKSVSTTYFQKKAEKFEKKIDGFSANLDENKKKLVESFTNLKNNHIKNPTTTDVLYKLADSHKQLKLQFESALAETSKLSTELESETSALNEAKDDVSQKKTKIKKRTDEKESLDLRKDEIEKQISELDQKIKDLDYFDAEDNNFETNSDTIQDIEEMFNSTSLYELKSEKKSLKKSLKEISNSIQEIEKDIKSEKYALDAKQKFLKTAQSSFDSVNEKLNRAKQKSCSLELQLKAKEIELNTTKKLKNENDLGIELLHKDIDTERCKAQKSFLKKQLNNVETEIKKLKDVIRKLESKEKRISKKSAHKLIKKSKQKEDDVVKQTDLSKKITKRETNKNSLNTFKKALDNFQKFESSLKEDLVKVQDALELNQNFKNSDSVSKNNDQANPDMNHEKPGRRHSVHF
SIO_010081: HDEF_RS01170
subclass of: SO_0000673
so part of: HDEF_RS01170
location: complement(223003..224250)
location: region:223003-224250:-1
so has part: feature:223003-224250:-1:exon

WP_044612230.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:223003-224250:-1:exon

HDEF_RS01175
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS01175
old locus tag: HDEF_0218
so part of: sequence
location: complement(224496..225419)
location: region:224496-225419:-1
so has part: feature:224496-225419:-1:exon
subclass of: SO_0000010

66260144
type: Gene
SIO_000068: ncbigene

position:224496:-1
position: 224496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:225419:-1
position: 225419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:224496-225419:-1:exon

HDEF_RS01175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS01175
old locus tag: HDEF_0218
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012737951.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SPFH domain-containing protein
translation: MLILIPILIVLALVIVSSSVKIVPQGFQWTVERFGRYTRTLMPGLNIIIPFVDQIGRKINMMEQVIDIPSQEVISRDNANVAIDAVCFIQVMDPVKAAYEVSNLELAIVNLTMTNFRTVLGSMELDEILSQRDNINSSLLHIVDEATNPWGVKITRIEIRDVRPPAELVSAMNAQMKAERTKRADILEAEGVRQAAILRAEGEKQSQILKAEGERQSAFLQAEARERAAEAEAQATKMVSEAIAAGDIQAINYFVAQKYTDALQNIGAANNSKVIMMPLEASNLMGAIGGISELIAQSKQDREKKPQ
SIO_010081: HDEF_RS01175
subclass of: SO_0000673
so part of: HDEF_RS01175
location: complement(224496..225419)
location: region:224496-225419:-1
so has part: feature:224496-225419:-1:exon

WP_012737951.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:224496-225419:-1:exon

HDEF_RS01180
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS01180
old locus tag: HDEF_0219
so part of: sequence
location: complement(225497..228415)
location: region:225497-228415:-1
so has part: feature:225497-228415:-1:exon
subclass of: SO_0000010

66260145
type: Gene
SIO_000068: ncbigene

position:225497:-1
position: 225497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:228415:-1
position: 228415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:225497-228415:-1:exon

HDEF_RS01180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS01180
old locus tag: HDEF_0219
EC number: 6.1.1.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857876.1
GO function: GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004832 - valine-tRNA ligase activity [Evidence IEA]
GO process: GO:0006438 - valyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: valine--tRNA ligase
translation: MKNRTRSLDKTYDPESIEQPLYEYWEKQGYFKPSNRTDQEQFCIMIPPPNVTGSLHMGHAFQQTIMDILIRYQRMQGKNTLWQVGTDHAGIATQMVVERKIASEEGKTRHDYGREAFIQKIWDWKAESGGKITRQMRRLGNSVDWERERFTMDEDLSLAVKEAFVRLYQEDLIYRGKRLVNWDPKLRTAISDLEVENRESQGSMWYLRYPLADGMTTKEGKNYLVVATTRPETMLGDTGVAVNPEDPRYKDLIGKKVMLPLVDRAVPIVGDAHADQEKGTGCVKITPAHDFNDYKVGKRHGLPMINILTFEGHIRHQPDIFDSQGEPMAMDSAVIPESFQGLERFAARKAVVADFKKSGLLEDIKPHDLTVPYGDRSQVVIEPMLTDQWYVRAAPLARKAIEAVEKGEIEFVPKQYENMYYSWMRDIQDWCISRQLWWGHRIPAWYDEQGQLYVGRDEAEVRRDYHLPDELPLRQDEDVLDTWFSSGLWTFSTLGWPNNTQALHTFHPTSVIVSGFDIIFFWIARMIMLTLHFVKDKNHQPQMPFKTVYMTGLIRDEEGQKMSKSKGNVIDPLDMIDGISLTELIKKRTDNMMQPQLAEKIRQRTEKQFPNGIPPHGTDALRFTLTALASTGRDINWDMKRLTGYRNFCNKLWNASRFVLMNTQGQDSGQNGGAQSLSLPDRWILSTFQNSIQSYRDALDQYRFDLAAHILYEFTWNQFCDWYLELSKPILNQTPDNPEKEAQSRGTRHTLITVLEALLRLAHPIIPYITETLWQEIKMVQTPSEADQAKTIMLQRFPEYDDSQIDEHAFSELEWIKKMTIAIRNVRAEINLPLNQKIDLELFTTSDTVRNTLFENLDLIQSIARLSSIRVLDKSEKAPSFVITRLIEDAEIRITLPESFDKAAEQMRLKNDLIKIEKQIDALQEKLANVHFTERAPQWIVSKEREKLAQLMAERQKLLERPQFDEIKTESN
SIO_010081: HDEF_RS01180
subclass of: SO_0000673
so part of: HDEF_RS01180
location: complement(225497..228415)
location: region:225497-228415:-1
so has part: feature:225497-228415:-1:exon

WP_012737952.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:225497-228415:-1:exon

HDEF_RS01185
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS01185
old locus tag: HDEF_0220
so part of: sequence
location: complement(228423..228875)
location: region:228423-228875:-1
so has part: feature:228423-228875:-1:exon
subclass of: SO_0000010

66260146
type: Gene
SIO_000068: ncbigene

position:228423:-1
position: 228423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:228875:-1
position: 228875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:228423-228875:-1:exon

HDEF_RS01185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS01185
old locus tag: HDEF_0220
EC number: 2.7.7.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012737953.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA polymerase III subunit chi
translation: MKRATFYLMEHGDPIHGLSPEETLTCELSAQHWRAGKKIQILCEEKAQAVRLDDALWLYPPDAFIPHHLSGEGPKQGAPVEMIWPDCLSHHSADLLINLLSECIDFVGRFTEIIDFVPYETTLKQLARARYAYYRQLGFHLITTSPPLSK
SIO_010081: HDEF_RS01185
subclass of: SO_0000673
so part of: HDEF_RS01185
location: complement(228423..228875)
location: region:228423-228875:-1
so has part: feature:228423-228875:-1:exon

WP_012737953.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:228423-228875:-1:exon

HDEF_RS01190
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: pepA
locus tag: HDEF_RS01190
old locus tag: HDEF_0221
so part of: sequence
location: complement(228903..230408)
location: region:228903-230408:-1
so has part: feature:228903-230408:-1:exon
subclass of: SO_0000010

66260147
type: Gene
SIO_000068: ncbigene

position:228903:-1
position: 228903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:230408:-1
position: 230408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:228903-230408:-1:exon

HDEF_RS01190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: pepA
locus tag: HDEF_RS01190
old locus tag: HDEF_0221
EC number: 3.4.11.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012737954.1
GO function: GO:0030145 - manganese ion binding [Evidence IEA]; GO:0070006 - metalloaminopeptidase activity [Evidence IEA]
GO process: GO:0019538 - protein metabolic process [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: leucyl aminopeptidase
translation: MEFKVNSECSEKQSSDCIVIGIFESGEFSPSAEKVNKISHGYLKGLPQNADLQGKAEQALLLHHVPHVAAERVLLIGCGKEEELDERRYKKLIKKMVNTLKETGAKNVFCYLPELKVKGKDIDWKIRSAIEVIQDALYCFDHYKSTKTLHALNQITFIVTATQTKAAQTAIQEGIALAVGINEAKNLANTPPNICNPAYLNASARKWAEKFKNVRVSVVNEDEMKKLGMNAYLAVGQGSKNESLMSIIEYKSGKIPAGTKPIVLVGKGMTFDSGGISIKPSQNMDEMKYDMCGAATVFGVMNVVAELNLPLYVIGVLAGAENMPGGNAYRPGDILTTLSGQTVEVLNTDAEGRLVLCDALTYVERFDPELVIDIATLTGACVVALGHHMSGLMSNHAPLAEDLLHASEQSGDLAWRLPLGEEYQEQLDSNFADMANIGGRTAGAITAGCFLSRFTHQYHWAHLDIAGTAWRTGKEKGATGRPVALLSQFLLNKALAQKQGA
SIO_010081: HDEF_RS01190
subclass of: SO_0000673
so part of: HDEF_RS01190
location: complement(228903..230408)
location: region:228903-230408:-1
so has part: feature:228903-230408:-1:exon

WP_012737954.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:228903-230408:-1:exon

HDEF_RS01195
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: lptF
locus tag: HDEF_RS01195
old locus tag: HDEF_0222
so part of: sequence
location: 230586..231680
location: region:230586-231680:1
so has part: feature:230586-231680:1:exon
subclass of: SO_0000010

66260148
type: Gene
SIO_000068: ncbigene

position:230586:1
position: 230586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:231680:1
position: 231680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:230586-231680:1:exon

HDEF_RS01195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: lptF
locus tag: HDEF_RS01195
old locus tag: HDEF_0222
EC number: 7.5.2.5
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857733.1
GO component: GO:0005886 - plasma membrane [Evidence IEA]
GO function: GO:0015221 - lipopolysaccharide transmembrane transporter activity [Evidence IEA]
GO process: GO:0015920 - lipopolysaccharide transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LPS export ABC transporter permease LptF
translation: MVITKYLIKEILKTQVAILFILSFIFFSQKLVTILDDIINHDIPAHLIFSLLGLGFAKMAELILPLSLFFALLMTYGKLYNESEIIAMYACGVGKTRLIKVALVLAALTSLFATINVFYFSPWSVKHEKKIINEERVNPGLSALVKGQFQSSPDGKIVLFIQDIQNKKFHKIFLAQRESNHTQRPTVVVANSGYISAPAPGIQLLTLNHGMNYEGIPPLGDFRITYFNHYQAVISRKSVTKNSNTAQQMSMSSLWEANDPDTRAELHWRLTLIVSVVIMAFMAVPLSQVNPRQGRVLSMLPAMLLYLIFFLLQSTLRSNAGNNRLDPLIWLWLVNGLYTILAIILNIWDSSTLRRLYTKSRETL
SIO_010081: HDEF_RS01195
subclass of: SO_0000673
so part of: HDEF_RS01195
location: 230586..231680
location: region:230586-231680:1
so has part: feature:230586-231680:1:exon

WP_012737955.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:230586-231680:1:exon

HDEF_RS01200
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: lptG
locus tag: HDEF_RS01200
old locus tag: HDEF_0223
so part of: sequence
location: 231680..232783
location: region:231680-232783:1
so has part: feature:231680-232783:1:exon
subclass of: SO_0000010

66260149
type: Gene
SIO_000068: ncbigene

position:232783:1
position: 232783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:231680-232783:1:exon

HDEF_RS01200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: lptG
locus tag: HDEF_RS01200
old locus tag: HDEF_0223
EC number: 7.5.2.5
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012737956.1
GO component: GO:0005886 - plasma membrane [Evidence IEA]
GO function: GO:0015221 - lipopolysaccharide transmembrane transporter activity [Evidence IEA]
GO process: GO:0015920 - lipopolysaccharide transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LPS export ABC transporter permease LptG
translation: MFFGILDRYIGRSILNTIIMTLFMLVSLSGIIKFIEQLRKVGEGNYSVFAAAIYTLLSVPNDIMIFFPMAALIGGILGLGALATRSELVVVQASGFSHMQIVLSVMKTAIILFLLSIIIGEWLAPLADQTASHYRTKMIYGGSVISTQSGIWAKDKSDFIYINQVINHHELSGVHIYHFDAHDRLISIRYAATAIFEKGAWQLSQIDESNLSDTKKIQGSQTLSEKWETSLTPYKLGIVAMDPDSLSIMGLYDYVKYLKQVGQDSDRYELKMWQKIFSPFSITVMILLSLSFIFGPLRSTATGLRIVTGICFGFVFYLLDKIFGPLSLLYQFSPILGAALPSVLFFSISLYLLLKPNITLFHFNPQR
SIO_010081: HDEF_RS01200
subclass of: SO_0000673
so part of: HDEF_RS01200
location: 231680..232783
location: region:231680-232783:1
so has part: feature:231680-232783:1:exon

WP_012737956.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:231680-232783:1:exon

HDEF_RS01205
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: ompA
locus tag: HDEF_RS01205
old locus tag: HDEF_0224
so part of: sequence
location: 233034..234131
location: region:233034-234131:1
so has part: feature:233034-234131:1:exon
subclass of: SO_0000010

66260150
type: Gene
SIO_000068: ncbigene

position:233034:1
position: 233034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:234131:1
position: 234131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:233034-234131:1:exon

HDEF_RS01205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: ompA
locus tag: HDEF_RS01205
old locus tag: HDEF_0224
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857731.1
GO function: GO:0015288 - porin activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: porin OmpA
translation: MKKTTIAVAVAFSGLTTLVQAAPKDDTWYLGSKLGWSRYASTGMKNDYIGIGDGPTHKNQIGAGAFLGYQANQYLGFELGSDWFGRMPYKGDTKNGAFKAYGVQIGAKLNYPIAEDLDIYTRLGGVVWKAKTKGYTSPEAKRLSENDTGVSPFAAVGLEYALTENWATRFDYQWTRKIGNFDSIGAAPNNGMLSIGVSYRFNQEKPPEILPEPVTKIDLEPVAQTQHFELKSDVLFGFNQWTLKKEGGEELNKLYSKLANVNPQEGSVTVLGFSDRIGGDKYNQLLSQKRAQSVADYLISKGISSDTPFVIKGLGKSNPVTGSKCNEVKKRLELVNCLAPDRRVDVKVTGNKVVITQPAESVFNY
SIO_010081: HDEF_RS01205
subclass of: SO_0000673
so part of: HDEF_RS01205
location: 233034..234131
location: region:233034-234131:1
so has part: feature:233034-234131:1:exon

WP_012737957.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:233034-234131:1:exon

HDEF_RS01210
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: glmS
locus tag: HDEF_RS01210
old locus tag: HDEF_0225
so part of: sequence
location: complement(234305..236134)
location: region:234305-236134:-1
so has part: feature:234305-236134:-1:exon
subclass of: SO_0000010

66260151
type: Gene
SIO_000068: ncbigene

position:234305:-1
position: 234305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:236134:-1
position: 236134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:234305-236134:-1:exon

HDEF_RS01210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: glmS
locus tag: HDEF_RS01210
old locus tag: HDEF_0225
EC number: 2.6.1.16
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005121462.1
GO function: GO:0004360 - glutamine-fructose-6-phosphate transaminase (isomerizing) activity [Evidence IEA]
GO process: GO:0006040 - amino sugar metabolic process [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glutamine--fructose-6-phosphate transaminase (isomerizing)
translation: MCGIVGAVAQRNIAKILIEGLRRLEYRGYDSAGLVVLDADGQMTCLREVGKVKALSDAAEKKILQGQTGIAHTRWATHGEPSKVNAHPQISQNICVVHNGIIENYHPLRELLIRQGYLFASETDTEVIAHLVHSEQQQGGSLLQVVQRVIPHLMGSYGAVIMDSHDLNLLIAVRSGSPMVIGLGENENFVASDQLALLPVTRRFIFLEEGDIAQIRRSDVEIFNQKGEKIQRPIWVSESKYDAGDKGIYRHYMQKEIYEQPMVIKNTLQGRLLHGRIDLSELGTRAKGILAQVEHIQIIGCGTSYHSGLVARYWFESLAGIACDVEIASEFRYRRSVVRSNSLLISLSQSGETADTLAALRLSQSLGYLGSLAICNVEGSSLVRESDFALMTKAGTEIGVASTKAFTTQLTVLLMLLAYIRRLKNQPEALEHQIVKALQILPARIEQIFSLTKDIETLAGDFSDKNHALYLGRGDLYPISMEGALKLKEISYIHAEAHAAGELKHGPLALIDSEIPIVILGPSNGLLEKLKSNIEEVRARGGRLYVFCDKQGEFVANQRMKLIVLPKIEEIIAPIVYSVPLQILSYYVALIKGRNIDQPRNLAKSVTVE
SIO_010081: HDEF_RS01210
subclass of: SO_0000673
so part of: HDEF_RS01210
location: complement(234305..236134)
location: region:234305-236134:-1
so has part: feature:234305-236134:-1:exon

WP_012737958.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:234305-236134:-1:exon

HDEF_RS01215
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: glmU
locus tag: HDEF_RS01215
old locus tag: HDEF_0226
so part of: sequence
location: complement(236149..237516)
location: region:236149-237516:-1
so has part: feature:236149-237516:-1:exon
subclass of: SO_0000010

66260152
type: Gene
SIO_000068: ncbigene

position:236149:-1
position: 236149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:237516:-1
position: 237516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:236149-237516:-1:exon

HDEF_RS01215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: glmU
locus tag: HDEF_RS01215
old locus tag: HDEF_0226
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857729.1
GO function: GO:0019134 - glucosamine-1-phosphate N-acetyltransferase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0003977 - UDP-N-acetylglucosamine diphosphorylase activity [Evidence IEA]
GO process: GO:0000902 - cell morphogenesis [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]; GO:0006048 - UDP-N-acetylglucosamine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU
translation: MSKKVMSVVILAAGKGTRMCSNLPKVLHLLAGKPMVQHVINTANQLDCTRIHLVYGHGGALLKEKLNNEKLNWILQEEQWGTGHALQKAIPYFSEDENILVLYGDVPLIEVDTLNRLLLAKPHGGISLLTARVDNPRGYGRIIRKNDDISGIVECKEATEIQKKINEINTGIMAINSSDLKKWLKQLKNDNHQNEFYLTDIIKMAYQENRKIIGIQPAHLNEIEGINDGLQLARLERLFQKQQAEKLLLSGVRILDPARFDLRGQLICGSDVVIDTNVIIEGEVTLGDRVQIRTGCLLKNCRIGDDSQINAYTVIEGSFLDKNCVVGPFARLRPGSELSEKVHVGNFVEIKKSSLGQGSKAGHLSYLGDAEIGSGVNIGAGTITCNYDGVNKHKTQIGDYVFVGSHTQFIAPVTVGDHATIGAGTTVTLNVPENELGLSRVKQKNIQGWKRPKKT
SIO_010081: HDEF_RS01215
subclass of: SO_0000673
so part of: HDEF_RS01215
location: complement(236149..237516)
location: region:236149-237516:-1
so has part: feature:236149-237516:-1:exon

WP_012737959.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:236149-237516:-1:exon

HDEF_RS01220
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS01220
old locus tag: HDEF_0227
so part of: sequence
location: 237585..238094
location: region:237585-238094:1
so has part: feature:237585-238094:1:exon
subclass of: SO_0000010

66260153
type: Gene
SIO_000068: ncbigene

position:237585:1
position: 237585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:238094:1
position: 238094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:237585-238094:1:exon

HDEF_RS01220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS01220
old locus tag: HDEF_0227
EC number: 2.7.1.107
inference: COORDINATES: protein motif:HMM:NF013391.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: diacylglycerol kinase
translation: MQTMISLKNKKNFNLKKSKTYFLKFVFLSLFLFLKKVIFLMVFKIKSILEKTLKKIFSIKKLFKSTQFALNGLKIVYKNEVAFRQECFILFFSILITFFINVSKVEKILMIGSIVFILIIEIINTAIEKVVNLIGTEKNILSGEAKDISASAVFVSILLACFIWFIILF
SIO_010081: HDEF_RS01220
subclass of: SO_0000673
so part of: HDEF_RS01220
location: 237585..238094
location: region:237585-238094:1
so has part: feature:237585-238094:1:exon

WP_234809418.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:237585-238094:1:exon

HDEF_RS01225
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS01225
old locus tag: HDEF_0228
so part of: sequence
location: 238238..239665
location: region:238238-239665:1
so has part: feature:238238-239665:1:exon
subclass of: SO_0000010

66260154
type: Gene
SIO_000068: ncbigene

position:238238:1
position: 238238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:239665:1
position: 239665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:238238-239665:1:exon

HDEF_RS01225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS01225
old locus tag: HDEF_0228
inference: COORDINATES: protein motif:HMM:NF013080.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphoethanolamine transferase
translation: MFSILILLKDTLKYIYILFIVFLSVLGSLYFPIGQIFGSPSYNTVLSVFSTNYLEAKEFLFSIPVFYYLSSLLILILAGILLIKKDIILPLKGKKWLFIFAIATCLHGPIKSMFSGEGFHLYKTGLPPIKFMIDFYRSIEKFKKDHRKTISVLNNDTWGNVSSNPDYSNYILVIGESVRKDFMHTYGFQIKNTPFSDQAQGIFFKNYLSAASSTQMSLMNTLALRENDELQLHNNIISLANKAGFKTYWFSNQGSRGTDDTAMANFARKAQVRQFLKSGSWSVNYSGSDEKLLPFIESALNNEDSKPKLIIVHLMGSHPPVCKRTQDQFDVYFRSKDLSCYIQTIKNTDTVLKKITKIANEKKDKWSMMYFSDHGLALKMQNNLDSQLHHSNKYKQNFEVPMFIISSDATQRTEITAHRSAFSFLSLFSEWTGIKTEKIPENCHFLSNTVCKNQTSVMLWNQKTVDIKDLPSDPG
SIO_010081: HDEF_RS01225
subclass of: SO_0000673
so part of: HDEF_RS01225
location: 238238..239665
location: region:238238-239665:1
so has part: feature:238238-239665:1:exon

WP_158533931.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:238238-239665:1:exon

HDEF_RS01230
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS01230
old locus tag: HDEF_0230
so part of: sequence
location: complement(239768..241045)
location: region:239768-241045:-1
so has part: feature:239768-241045:-1:exon
subclass of: SO_0000010

66260155
type: Gene
SIO_000068: ncbigene

position:239768:-1
position: 239768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:241045:-1
position: 241045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:239768-241045:-1:exon

HDEF_RS01230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS01230
old locus tag: HDEF_0230
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012230150.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hemolysin family protein
translation: MFNSLLIIIFLIAISAFFSLSEISLAASRKIKLKVMADEGDKRALRVLKLQETPGVFFTVVQIGLNAVAILGGILGDAAFSPFIKSIFMLFMRSEWADTLSFICSFSLITSLFILFADLAPKRIAMVSPEKVAVRIVPLMCFFLILFRPLIWFFNGMANIIFKFLKLPTVRNDDITSDDIYAVVEAGALAGLLRKEEHELIENVFELESRTVPSSMTTRENIIYFDLQESEQSIKEKISVHPHSKFLVCDGNIDQVVGYVSSKDLLNRVLGNQTLLLNGGIQIRSVLMLPDTQTLSEALDRFKSAGEDFAIILNEYALVVGMITLNDVMTTLMGGLVGHGQEEQIVERDENSWLIEGSTPIEDVMRVLDIEEFPESVNYETVAGFMMYMLRKIPKRTDFIQYKGYKFEVVDIDNYKIDQLLVTKT
SIO_010081: HDEF_RS01230
subclass of: SO_0000673
so part of: HDEF_RS01230
location: complement(239768..241045)
location: region:239768-241045:-1
so has part: feature:239768-241045:-1:exon

WP_012737963.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:239768-241045:-1:exon

HDEF_RS01235
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: lpxK
locus tag: HDEF_RS01235
old locus tag: HDEF_0231
so part of: sequence
location: 241438..242424
location: region:241438-242424:1
so has part: feature:241438-242424:1:exon
subclass of: SO_0000010

66260156
type: Gene
SIO_000068: ncbigene

position:241438:1
position: 241438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:242424:1
position: 242424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:241438-242424:1:exon

HDEF_RS01235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: lpxK
locus tag: HDEF_RS01235
old locus tag: HDEF_0231
EC number: 2.7.1.130
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012737964.1
GO function: GO:0009029 - tetraacyldisaccharide 4'-kinase activity [Evidence IEA]
GO process: GO:0009245 - lipid A biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tetraacyldisaccharide 4'-kinase
translation: MIDRIWFGHSRLYLLLLPFSWLYGLITWLIRLSYRSGLRVAWRSPIPIVVVGNLTVGGNGKTPIVIWLVEQLKKRGLQVGVVSRGYSGKSGKYPLILSHHTQPEEAGDEPVVIFQRTGVPVAVAPKRKEAIRALLKKHPLDLLIADDGLQHYALKRDFELVVIDGIRRFGNACLLPAGPMRENITRLHSVDAIIINGGEAQKEEILMQLRPSQAVNLVTGEKKPVEELISVIAMAGIGHPDRFFMMLAQLGVNIIKTQIFSDHQHYTLSTLLPLAKKTQSLCMTEKDAVKCKAFAQPNWWYLPVSADFPFVQSQKLLASIEALCHRIC
SIO_010081: HDEF_RS01235
subclass of: SO_0000673
so part of: HDEF_RS01235
location: 241438..242424
location: region:241438-242424:1
so has part: feature:241438-242424:1:exon

WP_012737964.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:241438-242424:1:exon

HDEF_RS01245
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS01245
old locus tag: HDEF_0233
so part of: sequence
location: 242906..243115
location: region:242906-243115:1
so has part: feature:242906-243115:1:exon
subclass of: SO_0000010

66260157
type: Gene
SIO_000068: ncbigene

position:242906:1
position: 242906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:243115:1
position: 243115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:242906-243115:1:exon

HDEF_RS01245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS01245
old locus tag: HDEF_0233
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002211317.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: cold-shock protein
translation: MTLKKGKVKWFDKIAGYGFISPEDGGLDIYVHKAAIANIKDKSLIAGQDVEFSYRVSFHGPSAEDVIAF
SIO_010081: HDEF_RS01245
subclass of: SO_0000673
so part of: HDEF_RS01245
location: 242906..243115
location: region:242906-243115:1
so has part: feature:242906-243115:1:exon

WP_012737966.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:242906-243115:1:exon

HDEF_RS01250
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS01250
old locus tag: HDEF_0234
so part of: sequence
location: 243389..243568
location: region:243389-243568:1
so has part: feature:243389-243568:1:exon
subclass of: SO_0000010

66260158
type: Gene
SIO_000068: ncbigene

position:243389:1
position: 243389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:243568:1
position: 243568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:243389-243568:1:exon

HDEF_RS01250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS01250
old locus tag: HDEF_0234
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004244593.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Trm112 family protein
translation: MDHHLLEIIACPICNGKLHFDKKNLELICQTDELAYPISNGIPVLLESHARDLSSLEKK
SIO_010081: HDEF_RS01250
subclass of: SO_0000673
so part of: HDEF_RS01250
location: 243389..243568
location: region:243389-243568:1
so has part: feature:243389-243568:1:exon

WP_012737967.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:243389-243568:1:exon

HDEF_RS01255
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: kdsB
locus tag: HDEF_RS01255
old locus tag: HDEF_0235
so part of: sequence
location: 243568..244314
location: region:243568-244314:1
so has part: feature:243568-244314:1:exon
subclass of: SO_0000010

66260159
type: Gene
SIO_000068: ncbigene

position:244314:1
position: 244314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:243568-244314:1:exon

HDEF_RS01255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: kdsB
locus tag: HDEF_RS01255
old locus tag: HDEF_0235
EC number: 2.7.7.38
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012737968.1
GO function: GO:0008690 - 3-deoxy-manno-octulosonate cytidylyltransferase activity [Evidence IEA]
GO process: GO:0009244 - lipopolysaccharide core region biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 3-deoxy-manno-octulosonate cytidylyltransferase
translation: MSFVIVIPARYGSTRLPGKPLIDIQGKPMVLHVMERAREAGADRVIVATDHIEILQVIKSAGGEACFTSSEHSSGTERLAEVIEKYRFSDTDIIVNVQGDEPMIPPIIIDQVAKNLANTCLGMATLAAPITNKVDLMNPNVVKVVVNALGHALYFSRAPIPWKRDGLMTEEKNRTALRHIGIYAYRVDFVRRYINWGKSPLEEIEKLEQLRVLWHGEKIHVDIVKKIPPQGIDSPEDLEKIRKILPDY
SIO_010081: HDEF_RS01255
subclass of: SO_0000673
so part of: HDEF_RS01255
location: 243568..244314
location: region:243568-244314:1
so has part: feature:243568-244314:1:exon

WP_012737968.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:243568-244314:1:exon

HDEF_RS01260
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS01260
old locus tag: HDEF_0236
so part of: sequence
location: 244661..246181
location: region:244661-246181:1
so has part: feature:244661-246181:1:exon
subclass of: SO_0000010

66260160
type: Gene
SIO_000068: ncbigene

position:244661:1
position: 244661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:246181:1
position: 246181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:244661-246181:1:exon

HDEF_RS01260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS01260
old locus tag: HDEF_0236
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002212018.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YifB family Mg chelatase-like AAA ATPase
translation: MALAVINTRASLGVQSPAVAVEAHISNGLPCFTLVGLPETAVKEARDRVRSAILNSGFMFPAKRITVSLGPADLPKEGGRYDLPIALAILIASEQVSGHKSVHYEFLGELALSGALRPINSTIPAALACSKANRKLILPSANSLEMTLIPEGEVMIAKHLLEVCGFLSGEENLLSVVNNETDLTDTYADLQDVIGQQQSKRALEVAAAGGHNLLLIGPPGTGKTMLASRLIGILPALTNEEALETAAVNSLLNIEKYPTQWRKRPFRSPHHSASIAALVGGGSLPRPGEISLAHNGVLFLYELPEFERRVLDSLREPLESGEIIISRAMAKIRFPARVQLIAAMNPSPSGHYKGIHHRTTPQQILRYLSKLSGPFLDRFDLSIEVPLLPPGLLQMQENQGESSSTIRTRVLKARERQLNRTKKINAHLNNKEVAKFCHISTKDAQFLEQVLLKLGLSVRAWHRILKVARTLADLAEQENIKKDHLAEALSYRCIDRLFLKLNKTLN
SIO_010081: HDEF_RS01260
subclass of: SO_0000673
so part of: HDEF_RS01260
location: 244661..246181
location: region:244661-246181:1
so has part: feature:244661-246181:1:exon

WP_012737969.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:244661-246181:1:exon

HDEF_RS01265
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS01265
old locus tag: HDEF_0237
so part of: sequence
location: complement(246507..246977)
location: region:246507-246977:-1
so has part: feature:246507-246977:-1:exon
subclass of: SO_0000010

66260161
type: Gene
SIO_000068: ncbigene

position:246507:-1
position: 246507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:246977:-1
position: 246977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:246507-246977:-1:exon

HDEF_RS01265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS01265
old locus tag: HDEF_0237
inference: COORDINATES: protein motif:HMM:NF024751.2
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS630 family transposase
translation: MAGYQKQGKSLVYLDESGFAHDMPRLYGYATRGQRCFGTHDWQAKGRTNVIGALLGVTLIAVGLFNCSINSDVFYAWVTQLLLPALPHPCVMMMDNASFHKRKDIQHAILNAGHSIEYLPPYSPEFNPIEHTWAQAKRKRRELQCDINTLFSEHIM
SIO_010081: HDEF_RS01265
subclass of: SO_0000673
so part of: HDEF_RS01265
location: complement(246507..246977)
location: region:246507-246977:-1
so has part: feature:246507-246977:-1:exon

WP_202820389.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:246507-246977:-1:exon

HDEF_RS01270
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS01270
old locus tag: HDEF_0238
so part of: sequence
location: complement(246952..247329)
location: region:246952-247329:-1
so has part: feature:246952-247329:-1:exon
subclass of: SO_0000010

66260162
type: Gene
SIO_000068: ncbigene

position:246952:-1
position: 246952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:247329:-1
position: 247329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:246952-247329:-1:exon

HDEF_RS01270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS01270
old locus tag: HDEF_0238
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006704235.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS630 transposase-related protein
translation: MSYSVDFRQKVLSIREKEGLSIRATAKRFHVGTDTLRRWLKRIEPKPSGPRRGKMDKEAFIKDVAEYPDSYQRERAARFGVCPKAIWQALKRWGLTYKKNSASSQGKRRGTTGVPGKNRGVSKAG
SIO_010081: HDEF_RS01270
subclass of: SO_0000673
so part of: HDEF_RS01270
location: complement(246952..247329)
location: region:246952-247329:-1
so has part: feature:246952-247329:-1:exon

WP_012737971.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:246952-247329:-1:exon

HDEF_RS01275
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS01275
old locus tag: HDEF_0239
pseudo: true
so part of: sequence
location: complement(<247452..>248447)
location: region:247452-248447:-1
so has part: feature:247452-248447:-1:exon
subclass of: SO_0000010

66260163
type: Gene
SIO_000068: ncbigene

position:247452:-1
position: 247452
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:248447:-1
position: 248447
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:247452-248447:-1:exon

HDEF_RS01275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS01275
old locus tag: HDEF_0239
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001525635.1
note: incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: ATPase, T2SS/T4P/T4SS family
SIO_010081: HDEF_RS01275
subclass of: SO_0000673
so part of: HDEF_RS01275
location: complement(<247452..>248447)
location: region:247452-248447:-1
so has part: feature:247452-248447:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:247452-248447:-1:exon

HDEF_RS13455
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS13455
old locus tag: HDEF_0240
so part of: sequence
location: complement(248429..248638)
location: region:248429-248638:-1
so has part: feature:248429-248638:-1:exon
subclass of: SO_0000010

78823907
type: Gene
SIO_000068: ncbigene

position:248429:-1
position: 248429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:248638:-1
position: 248638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:248429-248638:-1:exon

HDEF_RS13455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS13455
old locus tag: HDEF_0240
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MISLRSEKTGITRLPFSYARRFSVIVETDTADVPTLYYVPPLQKNIFLEVRRVTGIKLMPYQQTILNRD
SIO_010081: HDEF_RS13455
subclass of: SO_0000673
so part of: HDEF_RS13455
location: complement(248429..248638)
location: region:248429-248638:-1
so has part: feature:248429-248638:-1:exon

WP_012737973.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:248429-248638:-1:exon

HDEF_RS01280
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: gspD
locus tag: HDEF_RS01280
old locus tag: HDEF_0241
so part of: sequence
location: complement(248635..250698)
location: region:248635-250698:-1
so has part: feature:248635-250698:-1:exon
subclass of: SO_0000010

66260164
type: Gene
SIO_000068: ncbigene

position:248635:-1
position: 248635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:250698:-1
position: 250698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:248635-250698:-1:exon

HDEF_RS01280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: gspD
locus tag: HDEF_RS01280
old locus tag: HDEF_0241
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016856894.1
GO component: GO:0015627 - type II protein secretion system complex [Evidence IEA]
GO process: GO:0015628 - protein secretion by the type II secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II secretion system secretin GspD
translation: MFWSDILRLHIFRHRIFSFVKKINYPYFFPLILLLFFLFFPSILLADHFSANFQDTDLRAFIDTVGVNLNKTMIMGPHIQGRVSIRSTDTLSTEQYYQLFLNVLEAQGYAAIPVDGGALKIVRSMHVKTEPIPVITHQKNPYFGDEMMTQVMSLQNISARELTPVLRQLIDRGESGNIISHGPSNILILSGRAAVIKRLFSIIELIDSNADKFNEVIPLKNASATEMVRVINALNKNAPQNDLSISKYTVVADKRTNSVIIHAEPKMRQKIKKLIQELDSETQQSGYSQVFYLKYSQAEDLVDIIEKVSNTLKGKQNEQGQDQNRMSVSIAASKKTNALVVTASQDVMQSIRSIIEQLDIRRAQVHVEALIVEVAEISDINFGVQWQANNSLIQFNNGHQIPLGALTLARRHAESKTGNTLNQNETFLPSQVSSDISLLSKLLSGFSGAKVGIIKGDWQALVQAVKNDSSVNVLSTPSITTLDNQEASFMVGEDVPVLTGSAANANNTNPFNTVERRKIGVMLKVTPQINEGNTVQLLIEQEVSKIQGETKLDIKFAERKLKTTVLADDGQLIVLGGLLDEESGESVSKVPVLGDIPILGHLFKSTVNKKTKRNLMIFIRPTILRDGLSADGISQRKYHYMRAEQLYKNHPGLSLMPRTKQPLLPADGKESEYPAEIRALLAITKKS
SIO_010081: HDEF_RS01280
subclass of: SO_0000673
so part of: HDEF_RS01280
location: complement(248635..250698)
location: region:248635-250698:-1
so has part: feature:248635-250698:-1:exon

WP_012737974.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:248635-250698:-1:exon

HDEF_RS01285
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS01285
old locus tag: HDEF_0243
so part of: sequence
location: complement(250767..251276)
location: region:250767-251276:-1
so has part: feature:250767-251276:-1:exon
subclass of: SO_0000010

66260165
type: Gene
SIO_000068: ncbigene

position:250767:-1
position: 250767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:251276:-1
position: 251276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:250767-251276:-1:exon

HDEF_RS01285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS01285
old locus tag: HDEF_0243
inference: COORDINATES: protein motif:HMM:NF022800.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II secretion system protein N
translation: MRYQYFFKNVISKNNLIIFIHFLLWSLVVWKTTSLCLFFLSPSENIPIIDSPSEPVLSRSLPQIDINLIFKQNWFGDPDRKIQQNRLPKTQSPFILRGTAPAASENKSVAVIENNGIQKIYVPGETIDGSHIILLKVLSKKIVLENNGVQESLSLRDDHEKILNQNLIE
SIO_010081: HDEF_RS01285
subclass of: SO_0000673
so part of: HDEF_RS01285
location: complement(250767..251276)
location: region:250767-251276:-1
so has part: feature:250767-251276:-1:exon

WP_044612231.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:250767-251276:-1:exon

HDEF_RS01290
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS01290
old locus tag: HDEF_0246
so part of: sequence
location: complement(252153..252605)
location: region:252153-252605:-1
so has part: feature:252153-252605:-1:exon
subclass of: SO_0000010

66260166
type: Gene
SIO_000068: ncbigene

position:252153:-1
position: 252153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:252605:-1
position: 252605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:252153-252605:-1:exon

HDEF_RS01290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS01290
old locus tag: HDEF_0246
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAVWESASPSPGQWFTGLVETQTGAIKIVPVNIFGGQNGKLNELTLNNTGANSINRYASGVPGERNGKSIEPSWLSHRNGSTPHTAIAFKYGFNQESCLGFSLIKTTKNGEFAQIKFSSTSLNSKPDGEVKHSFSRATASDSKGFPQTAL
SIO_010081: HDEF_RS01290
subclass of: SO_0000673
so part of: HDEF_RS01290
location: complement(252153..252605)
location: region:252153-252605:-1
so has part: feature:252153-252605:-1:exon

WP_044612232.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:252153-252605:-1:exon

HDEF_RS01295
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS01295
old locus tag: HDEF_0248
so part of: sequence
location: complement(252826..253446)
location: region:252826-253446:-1
so has part: feature:252826-253446:-1:exon
subclass of: SO_0000010

66260167
type: Gene
SIO_000068: ncbigene

position:252826:-1
position: 252826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:253446:-1
position: 253446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:252826-253446:-1:exon

HDEF_RS01295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS01295
old locus tag: HDEF_0248
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MENIQNEFQNAIKTEQFDDKTIQDLYKRTNKMFKEDSILRSYFPGYLKQKTNPLMDALENLKTLVTPTKDSIVDKMILGTFCIFNVVAGQSSGMTTSSTEGGALEGLVGAVTTMSFNGIPEHDAHAQENKVQDERKYAYKDTERGNKSIKREGLRKERDENLKIFNDSCEQQRQNTTNKRKQKEFNSAIEARGTTNTPEQITVNRQ
SIO_010081: HDEF_RS01295
subclass of: SO_0000673
so part of: HDEF_RS01295
location: complement(252826..253446)
location: region:252826-253446:-1
so has part: feature:252826-253446:-1:exon

WP_012737979.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:252826-253446:-1:exon

HDEF_RS13460
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS13460
so part of: sequence
location: complement(254158..254280)
location: region:254158-254280:-1
so has part: feature:254158-254280:-1:exon
subclass of: SO_0000010

78823908
type: Gene
SIO_000068: ncbigene

position:254158:-1
position: 254158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:254280:-1
position: 254280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:254158-254280:-1:exon

HDEF_RS13460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS13460
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQNLKNFQRYHPESSDKKALESAMGVIFLISEDAQDWYEC
SIO_010081: HDEF_RS13460
subclass of: SO_0000673
so part of: HDEF_RS13460
location: complement(254158..254280)
location: region:254158-254280:-1
so has part: feature:254158-254280:-1:exon

WP_267892407.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:254158-254280:-1:exon

HDEF_RS01305
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS01305
old locus tag: HDEF_0251
so part of: sequence
location: 254505..254870
location: region:254505-254870:1
so has part: feature:254505-254870:1:exon
subclass of: SO_0000010

66260169
type: Gene
SIO_000068: ncbigene

position:254505:1
position: 254505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:254870:1
position: 254870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:254505-254870:1:exon

HDEF_RS01305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS01305
old locus tag: HDEF_0251
inference: COORDINATES: protein motif:HMM:NF024736.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MKNRHYPLKECDFIKIIEPHIIKYDKRPGRPASISHYQFFSAVLYVLRTGIPWRDVPDLYGHWHTIYMRFKRWSENGLFWNLLYRLQQKKKIKMDCTWVDSTTVAIHRHGSGSLKKRDLNR
SIO_010081: HDEF_RS01305
subclass of: SO_0000673
so part of: HDEF_RS01305
location: 254505..254870
location: region:254505-254870:1
so has part: feature:254505-254870:1:exon

WP_012737981.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:254505-254870:1:exon

HDEF_RS01310
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS01310
old locus tag: HDEF_0252
so part of: sequence
location: 254906..255292
location: region:254906-255292:1
so has part: feature:254906-255292:1:exon
subclass of: SO_0000010

66260170
type: Gene
SIO_000068: ncbigene

position:254906:1
position: 254906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:255292:1
position: 255292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:254906-255292:1:exon

HDEF_RS01310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS01310
old locus tag: HDEF_0252
inference: COORDINATES: protein motif:HMM:NF013752.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGLSGRFLRSACLSEGQRSDMKAFTELWIKGNGRKVSYIIADKGVDFFDVRKLIRDSGKSPVIPRRKGAVCTGIQPNDKEKYKTRSAIERFFFSIKEQKRLALRFDKLDITFFSFFAIACLKVFNLLC
SIO_010081: HDEF_RS01310
subclass of: SO_0000673
so part of: HDEF_RS01310
location: 254906..255292
location: region:254906-255292:1
so has part: feature:254906-255292:1:exon

WP_234809479.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:254906-255292:1:exon

HDEF_RS01315
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS01315
old locus tag: HDEF_0254
so part of: sequence
location: complement(255734..255997)
location: region:255734-255997:-1
so has part: feature:255734-255997:-1:exon
subclass of: SO_0000010

66260171
type: Gene
SIO_000068: ncbigene

position:255734:-1
position: 255734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:255997:-1
position: 255997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:255734-255997:-1:exon

HDEF_RS01315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS01315
old locus tag: HDEF_0254
inference: COORDINATES: protein motif:HMM:NF021627.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phage protease
translation: MTTHTFALNTELRPLLEATAAQKGTPLWVELIPVGEQITGRDGRSWVNDHPQGMVDAFQANHADLPIDIEHATELKAPKGDPALSVV
SIO_010081: HDEF_RS01315
subclass of: SO_0000673
so part of: HDEF_RS01315
location: complement(255734..255997)
location: region:255734-255997:-1
so has part: feature:255734-255997:-1:exon

WP_012737983.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:255734-255997:-1:exon

HDEF_RS01320
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS01320
old locus tag: HDEF_0255
so part of: sequence
location: 256132..256335
location: region:256132-256335:1
so has part: feature:256132-256335:1:exon
subclass of: SO_0000010

66260172
type: Gene
SIO_000068: ncbigene

position:256132:1
position: 256132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:256335:1
position: 256335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:256132-256335:1:exon

HDEF_RS01320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS01320
old locus tag: HDEF_0255
inference: COORDINATES: protein motif:HMM:NF022894.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: antitoxin MazE family protein
translation: MTVNQRVRKHREALRQAGYRPVTIWVPDTRDLQFIEKCRNQSVSLNQRDETKIMDWIDEVSDTEGWE
SIO_010081: HDEF_RS01320
subclass of: SO_0000673
so part of: HDEF_RS01320
location: 256132..256335
location: region:256132-256335:1
so has part: feature:256132-256335:1:exon

WP_012737984.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:256132-256335:1:exon

HDEF_RS01325
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS01325
old locus tag: HDEF_0256
so part of: sequence
location: 256332..256655
location: region:256332-256655:1
so has part: feature:256332-256655:1:exon
subclass of: SO_0000010

66260173
type: Gene
SIO_000068: ncbigene

position:256332:1
position: 256332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:256655:1
position: 256655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:256332-256655:1:exon

HDEF_RS01325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS01325
old locus tag: HDEF_0256
EC number: 3.1.-.-
inference: COORDINATES: protein motif:HMM:NF014505.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system PemK/MazF family toxin
translation: MKRGNIVTVVSNGDYGKPRPALIVQSDIFSQHPSVVVAPFTSVLTGASVFRYRMEPDDSNGLNCISEVMLDKLTAVPRHRLGNFCGSASKKDMQLVTQLMAVFLGIV
SIO_010081: HDEF_RS01325
subclass of: SO_0000673
so part of: HDEF_RS01325
location: 256332..256655
location: region:256332-256655:1
so has part: feature:256332-256655:1:exon

WP_012737985.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:256332-256655:1:exon

HDEF_RS01330
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS01330
old locus tag: HDEF_0257
so part of: sequence
location: 256905..257153
location: region:256905-257153:1
so has part: feature:256905-257153:1:exon
subclass of: SO_0000010

66260174
type: Gene
SIO_000068: ncbigene

position:256905:1
position: 256905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:257153:1
position: 257153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:256905-257153:1:exon

HDEF_RS01330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS01330
old locus tag: HDEF_0257
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKQFQDELEPLLGKRGWLGKVLMEDGAMVELGTPRRLKILYDTHMRTARAAGQWVRIERNKAALPYLRYGLGPSREHRLQHV
SIO_010081: HDEF_RS01330
subclass of: SO_0000673
so part of: HDEF_RS01330
location: 256905..257153
location: region:256905-257153:1
so has part: feature:256905-257153:1:exon

WP_012737986.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:256905-257153:1:exon

HDEF_RS01335
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: pilV
locus tag: HDEF_RS01335
old locus tag: HDEF_0258
so part of: sequence
location: complement(257141..257572)
location: region:257141-257572:-1
so has part: feature:257141-257572:-1:exon
subclass of: SO_0000010

66260175
type: Gene
SIO_000068: ncbigene

position:257141:-1
position: 257141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:257572:-1
position: 257572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:257141-257572:-1:exon

HDEF_RS01335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: pilV
locus tag: HDEF_RS01335
old locus tag: HDEF_0258
inference: COORDINATES: protein motif:HMM:NF016785.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: shufflon system plasmid conjugative transfer pilus tip adhesin PilV
translation: MTSLKKGIWQIFDASIGLGVGLFCFALIVLPLVYEFNKDQQYSTAATSPYILGVPELIQAGYLPAGFSETNLFSQRYHTRIVQPAPLKFHHMIFLTGGAPLSLSAARKMAMRIGGSGGYIEGGSARGVMGGWTEPLYAFSYTC
SIO_010081: HDEF_RS01335
subclass of: SO_0000673
so part of: HDEF_RS01335
location: complement(257141..257572)
location: region:257141-257572:-1
so has part: feature:257141-257572:-1:exon

WP_012737987.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:257141-257572:-1:exon

HDEF_RS01340
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS01340
old locus tag: HDEF_0260
so part of: sequence
location: 257725..257979
location: region:257725-257979:1
so has part: feature:257725-257979:1:exon
subclass of: SO_0000010

66260176
type: Gene
SIO_000068: ncbigene

position:257725:1
position: 257725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:257979:1
position: 257979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:257725-257979:1:exon

HDEF_RS01340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS01340
old locus tag: HDEF_0260
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006706572.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid stabilization protein
translation: MSMLTVRNLPDEVHRALRVRAAQHGRSTEAEVREILAITVKPETRVRLGDALADLGRNIGLTNKDFEIFNQVEDKIPAEPTKFE
SIO_010081: HDEF_RS01340
subclass of: SO_0000673
so part of: HDEF_RS01340
location: 257725..257979
location: region:257725-257979:1
so has part: feature:257725-257979:1:exon

WP_012737989.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:257725-257979:1:exon

HDEF_RS01345
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS01345
old locus tag: HDEF_0261
so part of: sequence
location: 257976..258419
location: region:257976-258419:1
so has part: feature:257976-258419:1:exon
subclass of: SO_0000010

66260177
type: Gene
SIO_000068: ncbigene

position:257976:1
position: 257976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:258419:1
position: 258419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:257976-258419:1:exon

HDEF_RS01345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS01345
old locus tag: HDEF_0261
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005934647.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system VapC family toxin
translation: MIVLDTNVVSESMKPQPHPAVRAWLNDQAAETLYLSSVTLAELLFGIGTLPTGKRKSMIEQALNGLMGLFKARVLPFDTDAARHYAELAVTAKAKAKAKAKGQGFPTPDGYIAAIAASRGFIVASRDISPYEAARVTVINPWNMQIK
SIO_010081: HDEF_RS01345
subclass of: SO_0000673
so part of: HDEF_RS01345
location: 257976..258419
location: region:257976-258419:1
so has part: feature:257976-258419:1:exon

WP_012737990.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:257976-258419:1:exon

HDEF_RS01350
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS01350
old locus tag: HDEF_0262
so part of: sequence
location: complement(258391..258981)
location: region:258391-258981:-1
so has part: feature:258391-258981:-1:exon
subclass of: SO_0000010

66260178
type: Gene
SIO_000068: ncbigene

position:258391:-1
position: 258391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:258981:-1
position: 258981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:258391-258981:-1:exon

HDEF_RS01350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS01350
old locus tag: HDEF_0262
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015873463.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type 4 pilus major pilin
translation: MKSLKQGIFNISDASIGWGMAFVGLAMVAAAGMGLYVKVYSTSSVASINTLLNETKSLRISTGYGTANLVPALIRSGAIPKGISIVGDRLFNASGGAITVTGKGIGFIVSTAGMNEKDCMKLATTLSNGDIASVRINSAPAMTGEITGTGLCRLCCWKKQYGDFYYEYVRPLRFTKTFKNEDVKRPRPTLFACSMD
SIO_010081: HDEF_RS01350
subclass of: SO_0000673
so part of: HDEF_RS01350
location: complement(258391..258981)
location: region:258391-258981:-1
so has part: feature:258391-258981:-1:exon

WP_012737991.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:258391-258981:-1:exon

HDEF_RS12900
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS12900
pseudo: true
so part of: sequence
location: <259031..259126
location: region:259031-259126:1
so has part: feature:259031-259126:1:exon
subclass of: SO_0000010

70691986
type: Gene
SIO_000068: ncbigene

position:259031:1
position: 259031
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:259126:1
position: 259126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:259031-259126:1:exon

HDEF_RS12900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS12900
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006706789.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: integrase
SIO_010081: HDEF_RS12900
subclass of: SO_0000673
so part of: HDEF_RS12900
location: <259031..259126
location: region:259031-259126:1
so has part: feature:259031-259126:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:259031-259126:1:exon

HDEF_RS01355
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS01355
old locus tag: HDEF_0263
so part of: sequence
location: 259327..261219
location: region:259327-261219:1
so has part: feature:259327-261219:1:exon
subclass of: SO_0000010

66260179
type: Gene
SIO_000068: ncbigene

position:259327:1
position: 259327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:261219:1
position: 261219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:259327-261219:1:exon

HDEF_RS01355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS01355
old locus tag: HDEF_0263
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012738249.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TraI/MobA(P) family conjugative relaxase
translation: MVVVIPKKRRDGKSSFLKLVFYLSFREDNPGDIPVTADAFFDRPSTSKIAVFDRLIDYIDRHASPESQQLITHLPDGSHRILCEGVLCQTNTLSIETASSEMNAMASNNRRCLDPVYHFILSWPEEETPEDSHIFDSALFCLKEMGMVDHQYVFAIHRDTDNLHCHVAANRIHPLSYRAVNLYNDVKILHKACRKLELKYDWKPDNGCWKRDQNHQIIRAESQYPSAPRASTQFEYHEDKESFYSYVVRTCRTELTSILKGPLQEWEEVHAVFLRAHLELKKKGSGLAIYDKNCPNNVPLKASSLHPQFTLSKLVPRIGEFESAPRVMEFKNEQGEVTLTNYMVSSHYDDRLHLRDHQARMTRRLERAEAREELKLRYQTDKKEAKCPSFDAKNRFRTLSMTFRFRRAHVCVAVRDPLMRKLAYHVLAFEREKAMAELRLKLKEERENWYRSPENRRLSYRVWVEQQALKGDKAAISQLRGWAYQAKRDERTAYLSDTVIECAVSDDIAPVELKGYTHHIHRDGAIVYKKEGITQMIDRGETIEMARPFENEGDNMVAGLHLAEQKSGEKRVFSGPREYVEKACSLVRDFNEMGQTALRLTDPIQQKRVCEMRSQDKPAPIVFDSPNLTP
SIO_010081: HDEF_RS01355
subclass of: SO_0000673
so part of: HDEF_RS01355
location: 259327..261219
location: region:259327-261219:1
so has part: feature:259327-261219:1:exon

WP_012737992.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:259327-261219:1:exon

HDEF_RS01360
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS01360
old locus tag: HDEF_0264
pseudo: true
so part of: sequence
location: 261350..>261616
location: region:261350-261616:1
so has part: feature:261350-261616:1:exon
subclass of: SO_0000010

66260180
type: Gene
SIO_000068: ncbigene

position:261350:1
position: 261350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:261616:1
position: 261616
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:261350-261616:1:exon

HDEF_RS01360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS01360
old locus tag: HDEF_0264
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004246922.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: HU family DNA-binding protein
SIO_010081: HDEF_RS01360
subclass of: SO_0000673
so part of: HDEF_RS01360
location: 261350..>261616
location: region:261350-261616:1
so has part: feature:261350-261616:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:261350-261616:1:exon

HDEF_RS12905
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS12905
so part of: sequence
location: complement(261953..263314)
location: region:261953-263314:-1
so has part: feature:261953-263314:-1:exon
subclass of: SO_0000010

70691987
type: Gene
SIO_000068: ncbigene

position:261953:-1
position: 261953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:263314:-1
position: 263314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:261953-263314:-1:exon

HDEF_RS12905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS12905
inference: COORDINATES: protein motif:HMM:TIGR01784.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Rpn family recombination-promoting nuclease/putative transposase
translation: MPTKEGIMQLNEKIIGWCNYYRIGASKQTFSAIDQWMWIRQCRYLYRRHPNKHWWWRRKHYLGKIPGREDYSVFMDKSNGGFLWKHAWTKIQRHWLVTKNASPDNPELRDYWRHRQARKQPFICGIKVNLYKRQKGYCPLCDQEVDNGEQLHVHNIQPKAEGGDNKLANLRLLHANCHRQLHSKKGKMLKSVSCVSRMRGNSHVRFLREWALSACLPNQSTDDKMMAFRMKKYSLAVMQQHLDQGHDTLPLVLPVLFYHGQKSPYPHSMDWRDCFCEKELARILDSQPFPLVDVTMLPEEEIMKHGIISWLEMSQKMVHTRDMMEIAPYLIRLDKLFPLNDELFKSLLYYLFQEGETADRMLFFDALYSTTQRENVMTIAEELKREGREEGREEGREEGREEGREEGREEGREEGREEGREEIAKNLLNNGFSFKQVKMYTGLSEDSLNKLLH
SIO_010081: HDEF_RS12905
subclass of: SO_0000673
so part of: HDEF_RS12905
location: complement(261953..263314)
location: region:261953-263314:-1
so has part: feature:261953-263314:-1:exon

WP_238526185.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:261953-263314:-1:exon

HDEF_RS12910
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS12910
pseudo: true
so part of: sequence
location: complement(<263492..264343)
location: region:263492-264343:-1
so has part: feature:263492-264343:-1:exon
subclass of: SO_0000010

70691988
type: Gene
SIO_000068: ncbigene

position:263492:-1
position: 263492
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:264343:-1
position: 264343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:263492-264343:-1:exon

HDEF_RS12910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS12910
inference: COORDINATES: protein motif:HMM:NF012307.2
note: internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: reverse transcriptase domain-containing protein
SIO_010081: HDEF_RS12910
subclass of: SO_0000673
so part of: HDEF_RS12910
location: complement(<263492..264343)
location: region:263492-264343:-1
so has part: feature:263492-264343:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:263492-264343:-1:exon

HDEF_RS01375
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS01375
old locus tag: HDEF_0266
so part of: sequence
location: complement(264970..265707)
location: region:264970-265707:-1
so has part: feature:264970-265707:-1:exon
subclass of: SO_0000010

66260182
type: Gene
SIO_000068: ncbigene

position:264970:-1
position: 264970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:265707:-1
position: 265707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:264970-265707:-1:exon

HDEF_RS01375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS01375
old locus tag: HDEF_0266
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MHTIKNLPRTSTTGHINQKPLFVRHESTNNVIDNIENKYYPSLEKDVILKESILSAFHRASVFCNKANRPDFITDGSCQASDIITMRNSLYHCIKDRLDDFKKELDEAKADGDLVTVQRIYAELVAKTYQDPLSLQEQTSKQTTSASPETIEMISETEDKYIEGAPTFCGEISYLFYHFLCQEGVNPNKMRVICFTQKDPNINPDSLKNHALIIYSSNQELLKKMENYCGVGEHVRRESCTTEVP
SIO_010081: HDEF_RS01375
subclass of: SO_0000673
so part of: HDEF_RS01375
location: complement(264970..265707)
location: region:264970-265707:-1
so has part: feature:264970-265707:-1:exon

WP_012737994.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:264970-265707:-1:exon

HDEF_RS01380
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: gpmA
locus tag: HDEF_RS01380
old locus tag: HDEF_0267
so part of: sequence
location: complement(265808..266557)
location: region:265808-266557:-1
so has part: feature:265808-266557:-1:exon
subclass of: SO_0000010

66260183
type: Gene
SIO_000068: ncbigene

position:265808:-1
position: 265808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:266557:-1
position: 266557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:265808-266557:-1:exon

HDEF_RS01380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: gpmA
locus tag: HDEF_RS01380
old locus tag: HDEF_0267
EC number: 5.4.2.11
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857872.1
GO function: GO:0004619 - phosphoglycerate mutase activity [Evidence IEA]
GO process: GO:0006096 - glycolytic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 2,3-diphosphoglycerate-dependent phosphoglycerate mutase
translation: MTIKKLILVRHGESEWNKENRFTGWADVDLSEKGRVEAQQAGNLLKKKGFSFDFAYTSVLRRATNTLSLILDVLQQQNLPIEKSWRLNERHYGALQGLNKSETAAKFGSEQVKQWRRGFSTLPPALNLNDPRAPANDSLYATLNKNDLPLTESLATTVDRVVPYWDEVVKPRIIDGKRVIIVAHGNSIRALVKYVDHLSEEEIMEINIPTAVPLVYEFNSSLQPINHYYLGNAEEITQKVAAVAAQGKA
SIO_010081: HDEF_RS01380
subclass of: SO_0000673
so part of: HDEF_RS01380
location: complement(265808..266557)
location: region:265808-266557:-1
so has part: feature:265808-266557:-1:exon

WP_012737995.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:265808-266557:-1:exon

HDEF_RS01385
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS01385
old locus tag: HDEF_0268
so part of: sequence
location: complement(266658..268721)
location: region:266658-268721:-1
so has part: feature:266658-268721:-1:exon
subclass of: SO_0000010

66260184
type: Gene
SIO_000068: ncbigene

position:266658:-1
position: 266658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:268721:-1
position: 268721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:266658-268721:-1:exon

HDEF_RS01385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS01385
old locus tag: HDEF_0268
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016505830.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: peptidase domain-containing ABC transporter
translation: MGKKPESYYLSAEDALSLVAKSINIKIDVDKNELERLFKQYDRNNINDTVKLKNFFLSLGLVLQEVHFNGSEDLLNEAMPIILLTPDMEWMACIGGGKKFKLIEAGGQICEVSLSAERLALISAFRLQPLRKVVDGIRVINILRQALSTNKIFYSKYFFSSFFMALFALTIPVFSNLYYDKLVPSASTASLFGIVFIAALFIIFEFILRSSKDIYQSIISRKDDVDIDVSFLEAVIYNKKKDGRSMSSAFVLWHEFQKVKQVLLNTVFQRLADIPLLIIFILVIYLNVGWVVFIPIFMFLFSILIAFIHHHYTYSLIEKQKKVQKNRNVFMTEVFYSIKMIHTLNNKNLLLDWVNSSNQQSYLNLKIRKFTLFYQSMLASISSVSHISIMVIAFFMVINGSVTTGAIVSSVIVSGRISGIISHFSSMVVSLLSAEKTAKDLIAFFENDKKNKPTLQSISHCSGQISLMGVSYQYHPQSPAVISNLSLDIPAGQRVVILGDSGAGKSSLLTLLSGYISPSEGVILYDGYNLSHLSQSFFSQQLSVVTAHDVLFTGTIESNFALKAHSDRERILQALALTNCNFILQHPMGLRFPVNFMARNLSSGQQQQLLIARSLSSDASIFLWDEPTSNIDENTEKKIFENLDTFMTAKTLLTVTHRRNLIKYFDRVLVMQNGQITRDCSPEKLML
SIO_010081: HDEF_RS01385
subclass of: SO_0000673
so part of: HDEF_RS01385
location: complement(266658..268721)
location: region:266658-268721:-1
so has part: feature:266658-268721:-1:exon

WP_012737996.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:266658-268721:-1:exon

HDEF_RS01390
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS01390
old locus tag: HDEF_0269
so part of: sequence
location: complement(268919..269692)
location: region:268919-269692:-1
so has part: feature:268919-269692:-1:exon
subclass of: SO_0000010

66260185
type: Gene
SIO_000068: ncbigene

position:268919:-1
position: 268919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:269692:-1
position: 269692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:268919-269692:-1:exon

HDEF_RS01390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS01390
old locus tag: HDEF_0269
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857874.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alpha/beta fold hydrolase
translation: MKLNFILHQSDSTSPNLPIILIHGLFGNLDNLSMLGRDFQKHHDVIQLDLRNYGLSPHSPEMNYFAMAQDVLELLDQLKIEKVIIIGHSMGGKVAMTMTALIPEIIKTLVIIDIAPVVYPLDRHNQIFMALNAVTDAKITQRHMAGKLMRDFVKDENIILFLLKSFHEGIWRFNVPVLWDQYQYIAGWEPIPTWQGPLLFLCGALSPYIKREYREQIAGYFPIARSHVISGCGHSPHAEKPDVVLRAIQHFFSKILH
SIO_010081: HDEF_RS01390
subclass of: SO_0000673
so part of: HDEF_RS01390
location: complement(268919..269692)
location: region:268919-269692:-1
so has part: feature:268919-269692:-1:exon

WP_171770461.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:268919-269692:-1:exon

HDEF_RS01395
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: seqA
locus tag: HDEF_RS01395
old locus tag: HDEF_0270
so part of: sequence
location: 269773..270303
location: region:269773-270303:1
so has part: feature:269773-270303:1:exon
subclass of: SO_0000010

66260186
type: Gene
SIO_000068: ncbigene

position:269773:1
position: 269773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:270303:1
position: 270303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:269773-270303:1:exon

HDEF_RS01395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: seqA
locus tag: HDEF_RS01395
old locus tag: HDEF_0270
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019081171.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0032297 - negative regulation of DNA-templated DNA replication initiation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication initiation negative regulator SeqA
translation: MKLIEVDEELYRYIAAHTQYIGESASEILRRMFSLTQKKQTEIKIKKTPKIHQSSVKATLFSRIQILNDILSSETYASKNKVIARFMLILSTLYDLDSKAFSVAAESLQGRKRAYFSGSKNFLLKNGTHTKPKQIPKTPYWVITNTNSERKRTMLKNMMIAMKFPNEIAKKVSQTI
SIO_010081: HDEF_RS01395
subclass of: SO_0000673
so part of: HDEF_RS01395
location: 269773..270303
location: region:269773-270303:1
so has part: feature:269773-270303:1:exon

WP_012737998.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:269773-270303:1:exon

HDEF_RS01400
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS01400
old locus tag: HDEF_0271
so part of: sequence
location: 270360..270812
location: region:270360-270812:1
so has part: feature:270360-270812:1:exon
subclass of: SO_0000010

66260187
type: Gene
SIO_000068: ncbigene

position:270360:1
position: 270360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:270812:1
position: 270812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:270360-270812:1:exon

HDEF_RS01400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS01400
old locus tag: HDEF_0271
EC number: 1.6.5.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005276398.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NADH-quinone oxidoreductase subunit A
translation: MQNIPQIFAHHWAFAIFSISAIGLCLAMLLGAFFLGGRAKARSKNIPYESGIDSVGSTHMRLSAKFYCFAMFFVIFDVEALYLYTWAISIRESGWTGFIEVSVFIFVLLVGLLYLSRIGALDWAPIGSRGRVQSNPSIYKMAQQRQSNNE
SIO_010081: HDEF_RS01400
subclass of: SO_0000673
so part of: HDEF_RS01400
location: 270360..270812
location: region:270360-270812:1
so has part: feature:270360-270812:1:exon

WP_012737999.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:270360-270812:1:exon

HDEF_RS01405
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS01405
old locus tag: HDEF_0272
so part of: sequence
location: 270818..271498
location: region:270818-271498:1
so has part: feature:270818-271498:1:exon
subclass of: SO_0000010

66260188
type: Gene
SIO_000068: ncbigene

position:270818:1
position: 270818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:271498:1
position: 271498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:270818-271498:1:exon

HDEF_RS01405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS01405
old locus tag: HDEF_0272
inference: COORDINATES: similar to AA sequence:RefSeq:YP_005228044.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NADH-quinone oxidoreductase subunit B
translation: MKYTLTRAEPNDKDHFTYPLQTQKNVSRDPLDEQAHRNIYMGKLEHALHDTVNWGRKNSLWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADFMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQGVDKFLPVDVYIPGCPPRPEAYMQALFLLQESIGKERRPLSWAIGDQGVYRAVMPSERKRKHAERIAVKNLRTPDEI
SIO_010081: HDEF_RS01405
subclass of: SO_0000673
so part of: HDEF_RS01405
location: 270818..271498
location: region:270818-271498:1
so has part: feature:270818-271498:1:exon

WP_012738000.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:270818-271498:1:exon

HDEF_RS01410
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: nuoC
locus tag: HDEF_RS01410
old locus tag: HDEF_0273
so part of: sequence
location: 271506..273305
location: region:271506-273305:1
so has part: feature:271506-273305:1:exon
subclass of: SO_0000010

66260189
type: Gene
SIO_000068: ncbigene

position:271506:1
position: 271506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:273305:1
position: 273305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:271506-273305:1:exon

HDEF_RS01410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: nuoC
locus tag: HDEF_RS01410
old locus tag: HDEF_0273
EC number: 1.6.5.9
inference: COORDINATES: similar to AA sequence:RefSeq:NP_416789.2
GO component: GO:0030964 - NADH dehydrogenase complex [Evidence IEA]
GO function: GO:0051287 - NAD binding [Evidence IEA]; GO:0050136 - NADH dehydrogenase (quinone) activity [Evidence IEA]; GO:0048038 - quinone binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NADH-quinone oxidoreductase subunit C/D
translation: MTDLIMAENLYKPCQTDDHLDDSVIARLSARFGQKSLFVQATRTGMPVVWVKADQLVEVILFLRQESQPYVMLFDLHGVDERLRTHREGLPEADFCVFYHLLSIERNRDILLKVALSEKKLCLPTITSIFSNANWYERETWEMFGITFEGHPHLKRILMPDTWKGHPLRKDYPARATEFDPFELTKQKQDLEMEALTFKPEDWGMKRGTQNEDFMFLNLGPNHPSSHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMAERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVKSIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAQDLPQGWEKLLRTFLDWMPKRLNSYVKAALENSILKGRSMGIASYNASDALAWGVTGAGLRATGIEFDVRKWRPYSGYEHFEFDVPVGYGQSDCYTRVMLKVEEIRQSMRILEQCYQHMPAGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGGTMSYRTRVRTPSFAHLQQIPSVIRGSLVSDLIVYLGSIDFVMSDVDR
SIO_010081: HDEF_RS01410
subclass of: SO_0000673
so part of: HDEF_RS01410
location: 271506..273305
location: region:271506-273305:1
so has part: feature:271506-273305:1:exon

WP_012738001.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:271506-273305:1:exon

HDEF_RS01415
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: nuoE
locus tag: HDEF_RS01415
old locus tag: HDEF_0274
so part of: sequence
location: 273350..273832
location: region:273350-273832:1
so has part: feature:273350-273832:1:exon
subclass of: SO_0000010

66260190
type: Gene
SIO_000068: ncbigene

position:273350:1
position: 273350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:273832:1
position: 273832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:273350-273832:1:exon

HDEF_RS01415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: nuoE
locus tag: HDEF_RS01415
old locus tag: HDEF_0274
EC number: 1.6.5.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006704323.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NADH-quinone oxidoreductase subunit NuoE
translation: MNVVPFVLSSEERDAIEEEKHHYEDARAASIEALKIVQKKRGWVPDEAIHAIAEVLGIPASDVEGVATFYSQIFRKPVGRHVIRYCDSVVCYITGYQKIQAVLEEKLGIQPGQTTKDGRFTLLPTCCLGNCDKGPTMMIDDDTHSHLQIENIDTLLEQYP
SIO_010081: HDEF_RS01415
subclass of: SO_0000673
so part of: HDEF_RS01415
location: 273350..273832
location: region:273350-273832:1
so has part: feature:273350-273832:1:exon

WP_086935026.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:273350-273832:1:exon

HDEF_RS01420
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: nuoF
locus tag: HDEF_RS01420
old locus tag: HDEF_0275
so part of: sequence
location: 273829..275247
location: region:273829-275247:1
so has part: feature:273829-275247:1:exon
subclass of: SO_0000010

66260191
type: Gene
SIO_000068: ncbigene

position:273829:1
position: 273829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:275247:1
position: 275247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:273829-275247:1:exon

HDEF_RS01420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: nuoF
locus tag: HDEF_RS01420
old locus tag: HDEF_0275
EC number: 1.6.5.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857067.1
GO function: GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0008137 - NADH dehydrogenase (ubiquinone) activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NADH-quinone oxidoreductase subunit NuoF
translation: MNSAPASITGAFKKIHKAPETHPLTWRLRDSQQPLWLEEYRNKNGYLGAKKALTRLTPEEIVHSVKEAGLKGRGGAGFSTGLKWSLMPKDPNMRIRYLLCNADEMEPGTYKDRLLMEQLPHLLVEGMLISAFALQAYRGYIFLRGEYIEAAVHLRRAIVEATQVGLLGKNIMGSGFDFELMVHTGAGRYICGEETALINSLEGRRANPRSKPPFPASSGVWGKPTCVNNVETLCNVPAIMEHGVAWYQGIAPDASRFAKSKDTGTKLMGFSGRVKNPGVWELPFGISAREILEDYAGGMKNGLKFKAWQPGGAGTDFLTEEHLDLPMDFEHIGKAGSRLGTALAMAVDHEINMVSLTCNLEEFFARESCGWCTPCRDGLPWSVKILKALERGEGREGDIETLEQLCRFLGPGKTFCAHAPGAVEPLQSALKYFREEFIAGITKKEPPHLYLKPIKGVQPNYVMADNLLKARW
SIO_010081: HDEF_RS01420
subclass of: SO_0000673
so part of: HDEF_RS01420
location: 273829..275247
location: region:273829-275247:1
so has part: feature:273829-275247:1:exon

WP_012738003.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:273829-275247:1:exon

HDEF_RS01425
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS01425
old locus tag: HDEF_0276
so part of: sequence
location: complement(275336..277450)
location: region:275336-277450:-1
so has part: feature:275336-277450:-1:exon
subclass of: SO_0000010

66260192
type: Gene
SIO_000068: ncbigene

position:275336:-1
position: 275336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:277450:-1
position: 277450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:275336-277450:-1:exon

HDEF_RS01425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS01425
old locus tag: HDEF_0276
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857068.1
GO process: GO:0030253 - protein secretion by the type I secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type I secretion system permease/ATPase
translation: MANHKKSSVPSLLALARGAACFDLAIESAQLEHKLGLPIEKIDDIALCRCANWIGLRARRIKQPVARLNTMPLPVLFSEGGNWYLLLNLNETHAVVYSPLSDNEGSISREQLNQLWSGKAILLAKAEKPAKKAAFGFGWFLPLILKHGRQLRNIVVISLLLQAILLVTPMLFETVIDKVLVSRGIDSLIVLGMAMIGLAIAEPIYTFLRGWLFSNLSTRVGAELNTRLYRHLMSLPLNYFSSRQTGQIIARVREMEQIRSFLTGSALTMLLDLFFVSTFIAVMFYYSVKLTSIVLISLCCYLVFWLCVGKILQKRVEREYEESANATSFLTEVITGLETIKTTTTEKQFNRQWQQYLANFVRSAFNTKQVGNLAGQGISLIYKITSALLLWYGVQLALEGKLSPGELVAFNMFSGYVTQPILRLAQIWQDLQHTKIALKRIGTILDSPSEPGNSGLVSSAQSAGRIAFKQVRFRYSQDTPEILQNLNISIKSGEFVGITGPSGSGKSTLTKLLQRLYTPQSGQILVDGQDLAITDPTALRRRMSVVLQESILFSGTIQENICQCRPNADMEEVEKVARLAGAHDFIMGLAQGYETQVGEKGGMLSGGQRQRIALARALMADPQILILDEATSALDYESEAAIMRQLPEITRNRTVICIAHRLNTLRGCDRILLLKEGVVHEEGTHSELVEQSGHYARLWALQTT
SIO_010081: HDEF_RS01425
subclass of: SO_0000673
so part of: HDEF_RS01425
location: complement(275336..277450)
location: region:275336-277450:-1
so has part: feature:275336-277450:-1:exon

WP_012738004.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:275336-277450:-1:exon

HDEF_RS01430
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS01430
old locus tag: HDEF_0277
so part of: sequence
location: complement(277452..278828)
location: region:277452-278828:-1
so has part: feature:277452-278828:-1:exon
subclass of: SO_0000010

66260193
type: Gene
SIO_000068: ncbigene

position:277452:-1
position: 277452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:278828:-1
position: 278828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:277452-278828:-1:exon

HDEF_RS01430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS01430
old locus tag: HDEF_0277
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857069.1
GO process: GO:0030253 - protein secretion by the type I secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HlyD family type I secretion periplasmic adaptor subunit
translation: MKFLQAFYQKMMKWREKEKKVQLTRDEYDFLPAYLEIIERPAAPWARRTAWLILGFLLLVLLWSIIGKLDIHATALGKVIVSDRTKVIQSLDPGTVIAINVRDGQKVKAGQVLLELNPVGIDTEVLKVSEQLAHRSLEKARLTALLTSAPLSHFSPPADTEELIEASRALLQREFDEVNAELERQDMKIAVNQTNDESVQEQISNQKTLIQNIEQRLKALRTLAKTQSIAKIDLLEKEKEWLNGKALLSEMQGKQKILLSEKQSYLQEKQRYMAEKKRDYRERLNKVQENISQLKQEKIKLMDRQRLQMLRLPIDGVVQELSVHTLEGVVSSAQKLMSIVPEDTHLEIEAMVLNKDVGFVLPGQTVEVKVDSFPYTRYGTLKGEVKHVSLDAVEDQKQGLIFPTRIKLMDDTLKVDGQLVRLSAGMSVNAEIKTGKRRVIDYLLSPLQQYQSEAMRER
SIO_010081: HDEF_RS01430
subclass of: SO_0000673
so part of: HDEF_RS01430
location: complement(277452..278828)
location: region:277452-278828:-1
so has part: feature:277452-278828:-1:exon

WP_012738005.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:277452-278828:-1:exon

HDEF_RS01435
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS01435
old locus tag: HDEF_0278
so part of: sequence
location: complement(278825..280951)
location: region:278825-280951:-1
so has part: feature:278825-280951:-1:exon
subclass of: SO_0000010

66260194
type: Gene
SIO_000068: ncbigene

position:278825:-1
position: 278825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:280951:-1
position: 280951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:278825-280951:-1:exon

HDEF_RS01435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS01435
old locus tag: HDEF_0278
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005277665.1
GO process: GO:0030253 - protein secretion by the type I secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type I secretion system permease/ATPase
translation: MENHLLSALVCSARLLNLAGLHPISIEKFRNSCLFNDEDRVTQEQLKRNLNQFGKLSSAKFHLRSLTLDKLKPQHLPLAFRDKTGQFVILAGINQQQALLQYSNTQKPEIINRSELDNLWGGLCLFCKQSRFDIRWFIPVFLRHRRQLTQVLLVSLMLQLLALVAPLFFQVVMDKVLVHNALATLDVLVITLVVVGVFEVVLKSLREYLFAHTTTRVDIQLGGKLFHHLIHLPLSYFKQRHVGNIVARVRELDSIREFITGSALTLSVDVVFSVVLFTVMWFISPYLTLIALASLPCFVVLAFMTTKPLQKKVETLACCAAQNGSFLTETVAGVETLKSLALEPRMQHRWEEQTCDFAKANFDVQNVQNFSTQTAQLLQKLTTTSVIVFGAYEVMGIHLSIGQLIAFHMLLVQAMLPMTKLVDLWQQSIRAQVGLSLLADILTLPMENSGSGFKPKKPLEGAISLHKVIFRYRPDLPPVLRELTLRISSGEHIGLVGPSGSGKSTIARLIQRLYTAEQGEILIDGKNVNQFDAHALRRQVGVVMQENYLFNRTVRENIAHAFPTAPLEQVVKAACLAGADEFILALPLGYDTVLSEGGSSLSGGQRQRIAIARALLSDPKILIFDEATSALDDDSQSQIMKNMAEIVASRTVITIAHRLSTVRHCDRIAVIEGGVLTELASHDELLAFKGSYYRLWQQQINFSTEEMK
SIO_010081: HDEF_RS01435
subclass of: SO_0000673
so part of: HDEF_RS01435
location: complement(278825..280951)
location: region:278825-280951:-1
so has part: feature:278825-280951:-1:exon

WP_171770492.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:278825-280951:-1:exon

HDEF_RS01440
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: bioA
locus tag: HDEF_RS01440
old locus tag: HDEF_0279
so part of: sequence
location: 281504..282805
location: region:281504-282805:1
so has part: feature:281504-282805:1:exon
subclass of: SO_0000010

66260195
type: Gene
SIO_000068: ncbigene

position:281504:1
position: 281504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:282805:1
position: 282805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:281504-282805:1:exon

HDEF_RS01440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: bioA
locus tag: HDEF_RS01440
old locus tag: HDEF_0279
EC number: 2.6.1.62
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011191956.1
GO function: GO:0004015 - adenosylmethionine-8-amino-7-oxononanoate transaminase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO process: GO:0009102 - biotin biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: adenosylmethionine--8-amino-7-oxononanoate transaminase
translation: MKQDDLDFDRHHIWHPYTRMIDPLPCYPVKSAQGVELILADGRRLIDGMSSWWAAIHGYNCRELNQALHQQIEKMSHVMFGGITHSPAIDLCRQLIALTPDPLDCVFLADSGSVSVEVALKMALQYWHAKGERRSKILSFRQGYHGDTFGALSVCDPENSMQALYQGYVAKNLFAPAPPAYQFSEGHFFDAPWNNEEIQSFSQLIETNNTDIAAVILEPIVQGAGGMRIYHPAFLREVSALCERHQILLIADEIATGFGRTGRLFACNYAAIAPDILCLGKALTGGYLTLSATLCTRELANTISKGKAGCFMHGPTFMANPLACAVANANLAILARHEWQPQVKAIEHQLWAELSPLSAHPTVLDVRVLGAIGVIEMKKAVDVASLQREFVAQGVWIRPFGKLIYVMPPYIIRPEQLTQLTQAMAHVIFNRQN
SIO_010081: HDEF_RS01440
subclass of: SO_0000673
so part of: HDEF_RS01440
location: 281504..282805
location: region:281504-282805:1
so has part: feature:281504-282805:1:exon

WP_012738007.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:281504-282805:1:exon

HDEF_RS11085
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS11085
old locus tag: HDEF_0280
so part of: sequence
location: complement(282897..285041)
location: region:282897-285041:-1
so has part: feature:282897-285041:-1:exon
subclass of: SO_0000010

66261915
type: Gene
SIO_000068: ncbigene

position:282897:-1
position: 282897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:285041:-1
position: 285041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:282897-285041:-1:exon

HDEF_RS11085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS11085
old locus tag: HDEF_0280
inference: COORDINATES: protein motif:HMM:TIGR01414.1
GO component: GO:0009279 - cell outer membrane [Evidence IEA]
GO function: GO:0015474 - autotransporter activity [Evidence IEA]
GO process: GO:0046819 - protein secretion by the type V secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: autotransporter outer membrane beta-barrel domain-containing protein
translation: MTGHHLDINVEGQGARAISAEEDSTMDIKDSTVSSHGENSFGIVALRRTKVTGHHLGIKVEGQGARAISAKHNSTVDIQDSTVSSHGDNARGIVAFENANITLNNSTLSSIGENAIGIVAFRTAKVTGNDLDIKVGGQGTSAIFPNQNSTLHLHDSHIQTLDKNAAILAFDTGATDTTVTMTGGSLHAAGDLILSAGGKTNLVFSRVVISPPGSGHAIHFTGTGGEVDLTLNQTALYGNIMAEGENKARVTLDSGSTWSFTNNATVTNLKNAGQMVFEPPHDTPSFSTLTTDHYEGDSGKILFYARLEGDDSPANKLIINESSKGTTRVTVRNVGGKGGATKGGIRLIEAKEGTDGTFVQDGPIVAGSYQYSLQKGNQENPNDWYLVSSWFARPESLSYANNLRAANTMFHMTLHERLGETQYTEALSEDSPVPGMWIRASGGHHTSSLSDNDAQSHRYVMMLGGDIAQWSSDGLNRYHLGVMGGYGHEYSKAHHRHHGMSSQGKVRGYSAGGYATWYQHPKAPSGFYVDTWALYHWLKNEVTPEERRTESYKSRGVTASVEGGYLLKVGEYVSRSGILHSFWVEPKAQLTWMDVKPENHTDQNGTRVTGQGNYLQSRLGLRAHLLGHSPKDEGKQREFEPFIEANWIYQPKPTAIRMDDRKYEIQGARHLGEFKMGVDAKISSRLHLWGHVAHQIGKKSYRDTRGAVGVKYHF
SIO_010081: HDEF_RS11085
subclass of: SO_0000673
so part of: HDEF_RS11085
location: complement(282897..285041)
location: region:282897-285041:-1
so has part: feature:282897-285041:-1:exon

WP_012738008.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:282897-285041:-1:exon

HDEF_RS12380
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS12380
so part of: sequence
location: complement(285038..285199)
location: region:285038-285199:-1
so has part: feature:285038-285199:-1:exon
subclass of: SO_0000010

66262050
type: Gene
SIO_000068: ncbigene

position:285038:-1
position: 285038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:285199:-1
position: 285199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:285038-285199:-1:exon

HDEF_RS12380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS12380
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTGHHLDINVEGQGARAISAEEDSTMDIKDSTISSQGENSRGILTFEAARVTG
SIO_010081: HDEF_RS12380
subclass of: SO_0000673
so part of: HDEF_RS12380
location: complement(285038..285199)
location: region:285038-285199:-1
so has part: feature:285038-285199:-1:exon

WP_158533932.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:285038-285199:-1:exon

HDEF_RS01450
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS01450
old locus tag: HDEF_0281
so part of: sequence
location: complement(285252..285911)
location: region:285252-285911:-1
so has part: feature:285252-285911:-1:exon
subclass of: SO_0000010

66260196
type: Gene
SIO_000068: ncbigene

position:285252:-1
position: 285252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:285911:-1
position: 285911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:285252-285911:-1:exon

HDEF_RS01450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS01450
old locus tag: HDEF_0281
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRYKKITLHTLRLSVLTMLIHSGAGVSETTVFDGVTHELNEQAYLEGIEARNKAQVNNRPVQPLSLSGGGSKKTAVKTSGVGTSVMLKGTEKQKITVDTQAAGSSYGLWAIDDSTLTLRHMEITLKGANDWAVAVEKGAKVDIGNSTLSGIKKNFYGLWAKGKETEVTGHQLKINSRNGDGGRAVTSYSARITLKDSTISSQGENSRGILTFEAARVTG
SIO_010081: HDEF_RS01450
subclass of: SO_0000673
so part of: HDEF_RS01450
location: complement(285252..285911)
location: region:285252-285911:-1
so has part: feature:285252-285911:-1:exon

WP_044612233.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:285252-285911:-1:exon

HDEF_RS01455
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS01455
old locus tag: HDEF_0283
so part of: sequence
location: complement(286148..286849)
location: region:286148-286849:-1
so has part: feature:286148-286849:-1:exon
subclass of: SO_0000010

66260197
type: Gene
SIO_000068: ncbigene

position:286148:-1
position: 286148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:286849:-1
position: 286849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:286148-286849:-1:exon

HDEF_RS01455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS01455
old locus tag: HDEF_0283
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKNGNNCKFEINDLNQSDQIAIGFAYQIFLNNNNLLKIHSGRYEGEVSYSIDNIVNTHSNFSKNIDHFTIKFVLNVKHHLKVHLTGHSKVQLEPCAQAGNCRAATINQNWQNWHQNRYPLTGKTRFSLSSSGPFKVYLECEYESQSGCAIESKKNQTLVPVQTRLGLPDFAVPENKLLQTKNHVDDIIFPPDVNNQQGDINFSVTSDNVETMLKNAPDNYSGRVTVVFDTEFN
SIO_010081: HDEF_RS01455
subclass of: SO_0000673
so part of: HDEF_RS01455
location: complement(286148..286849)
location: region:286148-286849:-1
so has part: feature:286148-286849:-1:exon

WP_148206991.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:286148-286849:-1:exon

HDEF_RS01460
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS01460
old locus tag: HDEF_0284
so part of: sequence
location: complement(286989..287459)
location: region:286989-287459:-1
so has part: feature:286989-287459:-1:exon
subclass of: SO_0000010

66260198
type: Gene
SIO_000068: ncbigene

position:286989:-1
position: 286989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:287459:-1
position: 287459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:286989-287459:-1:exon

HDEF_RS01460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS01460
old locus tag: HDEF_0284
inference: COORDINATES: protein motif:HMM:NF024751.2
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS630 family transposase
translation: MAGYQKQGKSLVYLDESGFAHDMPRLYGYATRGQRCFGTHDWQAKGRTNVIGALLGVTLIAVGLFNCSINSDVFYAWVTQLLLPALPHPCVMMMDNASFHKRKDIQHAILNAGHSIEYLPPYSPEFNPIEHTWAQAKRKRRELQCDINTLFSEHIM
SIO_010081: HDEF_RS01460
subclass of: SO_0000673
so part of: HDEF_RS01460
location: complement(286989..287459)
location: region:286989-287459:-1
so has part: feature:286989-287459:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:286989-287459:-1:exon

HDEF_RS01465
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS01465
old locus tag: HDEF_0285
so part of: sequence
location: complement(287434..287811)
location: region:287434-287811:-1
so has part: feature:287434-287811:-1:exon
subclass of: SO_0000010

66260199
type: Gene
SIO_000068: ncbigene

position:287434:-1
position: 287434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:287811:-1
position: 287811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:287434-287811:-1:exon

HDEF_RS01465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS01465
old locus tag: HDEF_0285
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006704235.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS630 transposase-related protein
translation: MSYSVDFRQKVLSIREKEGLSIRATAKRFHVGTDTLRRWLKRIEPKPSGPRRGKMDKEAFIKDVAEYPDSYQRERAARFGVCPKAIWQALKRWGLTYKKNSASSQGKRRGTTGVPGKNRGVSKAG
SIO_010081: HDEF_RS01465
subclass of: SO_0000673
so part of: HDEF_RS01465
location: complement(287434..287811)
location: region:287434-287811:-1
so has part: feature:287434-287811:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:287434-287811:-1:exon

HDEF_RS01470
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS01470
so part of: sequence
location: complement(287862..288221)
location: region:287862-288221:-1
so has part: feature:287862-288221:-1:exon
subclass of: SO_0000010

66260200
type: Gene
SIO_000068: ncbigene

position:287862:-1
position: 287862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:288221:-1
position: 288221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:287862-288221:-1:exon

HDEF_RS01470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS01470
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSILLLAVNMAARANEVTLYYEWDAENQNGLTFIEERQGVDSFNIPNFIQTGVNGSGDPPRQFVSSALQLKLTPNVNTQKSNIDLKSIPPKTVTLKLQNRSLQTINLMFHLNTLDFRYS
SIO_010081: HDEF_RS01470
subclass of: SO_0000673
so part of: HDEF_RS01470
location: complement(287862..288221)
location: region:287862-288221:-1
so has part: feature:287862-288221:-1:exon

WP_148206992.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:287862-288221:-1:exon

HDEF_RS01475
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS01475
old locus tag: HDEF_0286
so part of: sequence
location: complement(288245..289924)
location: region:288245-289924:-1
so has part: feature:288245-289924:-1:exon
subclass of: SO_0000010

66260201
type: Gene
SIO_000068: ncbigene

position:288245:-1
position: 288245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:289924:-1
position: 289924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:288245-289924:-1:exon

HDEF_RS01475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS01475
old locus tag: HDEF_0286
inference: COORDINATES: protein motif:HMM:NF027306.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TcfC E-set like domain-containing protein
translation: MLIRQDSVSAFPVYITGRNQSIAEVWQNERLIYTQQLQSGIQALDTRQLPNGIYDITIKIIENGQTVDTQKAQIYKPQGWNDPDKRWRLNFWGGQRRTFGTSWHHKQNNNPFTVGGEVDILAHPRAIVGLSGALAEKETQVGTRANITISENDRLFTQYTLSNTQEHLSKNTTIHYYRKIPIGSAGLYWRSTNKKYHDQKTRSRERQHTWGTNLSLRLPWSTSLMLSAEYVDRIQNKGFGADISLSKSTQISGHNTNFRLSGYHRPGFDKKERDQGVSFGVSVALAPANRHRISAETGLNQHQNYSSLKYQWEPGDDDNPIRTLGAGVSQSSRNTIISTNGAIEARYLSGNVYTQHHIQGSSHTVGGNLSQLFVLGGGKVGAANGNNRIESALIVDVDADDDSTSILASGNMGEKRLFKGKNIVPIQLWEKNNIQFTARGGEGVQVFPEHHSVQMNRGSVKYLKVKAMKTFTLVGMLKDEQGNLLKNRYVSSDVAGAMINADGVLTLDSGVSNRLLTVTEKEGRPKMQCALPSEMDKKKQIHFINTVLCRAVSVGEEKS
SIO_010081: HDEF_RS01475
subclass of: SO_0000673
so part of: HDEF_RS01475
location: complement(288245..289924)
location: region:288245-289924:-1
so has part: feature:288245-289924:-1:exon

WP_234809422.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:288245-289924:-1:exon

HDEF_RS12915
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS12915
so part of: sequence
location: complement(289940..290680)
location: region:289940-290680:-1
so has part: feature:289940-290680:-1:exon
subclass of: SO_0000010

70691989
type: Gene
SIO_000068: ncbigene

position:289940:-1
position: 289940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:290680:-1
position: 290680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:289940-290680:-1:exon

HDEF_RS12915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS12915
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKYLSVLLTITPLFAPAQEMTLASHMRGLPDDFKRYFYDSELIVQVYLNDTALFDAAISLKENGEIRLIRIVDTSYQADDVDPEIKARWADVLKQGVSVGQCTQNCPSGLMAVEYRLDNSVLKLYTSQYEKGQVNTDFISLPKDMPGGVMMYNTVSARGTSHKERSWGINSTLKSSFAGWSQNASFYSSGTGEGHHRKSSSSLYQLFSQKELQGSFVRLGLFTPSSDTSNVQTSGFGDHSVVGAM
SIO_010081: HDEF_RS12915
subclass of: SO_0000673
so part of: HDEF_RS12915
location: complement(289940..290680)
location: region:289940-290680:-1
so has part: feature:289940-290680:-1:exon

WP_234809423.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:289940-290680:-1:exon

HDEF_RS01480
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS01480
old locus tag: HDEF_0287
so part of: sequence
location: complement(290769..291287)
location: region:290769-291287:-1
so has part: feature:290769-291287:-1:exon
subclass of: SO_0000010

66260202
type: Gene
SIO_000068: ncbigene

position:290769:-1
position: 290769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:291287:-1
position: 291287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:290769-291287:-1:exon

HDEF_RS01480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS01480
old locus tag: HDEF_0287
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857076.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQPLKKTHLCVLKKYLAVAALSCAASVISVKSIAAKQDLDIKLTAEVPEKEFKLENKEIPLTMRADKTNEVFKGEASIKYLNAEKVQSLKVAIVNNPQLSLGQTESIGIKSVLIDDKELVNSLEGVEFTRDNLTNFHEKRIPLKITSESYKEVPEGKYEGTVTLQFDATISS
SIO_010081: HDEF_RS01480
subclass of: SO_0000673
so part of: HDEF_RS01480
location: complement(290769..291287)
location: region:290769-291287:-1
so has part: feature:290769-291287:-1:exon

WP_100103869.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:290769-291287:-1:exon

HDEF_RS01485
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS01485
old locus tag: HDEF_0288
so part of: sequence
location: complement(291384..292142)
location: region:291384-292142:-1
so has part: feature:291384-292142:-1:exon
subclass of: SO_0000010

66260203
type: Gene
SIO_000068: ncbigene

position:291384:-1
position: 291384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:292142:-1
position: 292142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:291384-292142:-1:exon

HDEF_RS01485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS01485
old locus tag: HDEF_0288
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857077.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGRFKQVLMMTLSGFCFFGQTLFVSATAGISIGAMYDVLNSETQSMSKRIYNSGDSTAFVRVELLEIHPGDKNTSQEIPLKEVTGNVLEKNRLIVTPLRLIIPPGGFQAVRILWPGDRTTERYFRIRFIPVAPKADDDFGLDKKALEKHSQEMKAGVNILAGYGSILIVQPDKPVFNSVINADSPKVITIQNNGNTTISLNKIRECKNANTGCGPYSRRFVLPGRTYSMNKKSGYQTNFTLIEGNNQRKFSD
SIO_010081: HDEF_RS01485
subclass of: SO_0000673
so part of: HDEF_RS01485
location: complement(291384..292142)
location: region:291384-292142:-1
so has part: feature:291384-292142:-1:exon

WP_100096298.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:291384-292142:-1:exon

HDEF_RS01490
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS01490
old locus tag: HDEF_0289
so part of: sequence
location: 292403..293290
location: region:292403-293290:1
so has part: feature:292403-293290:1:exon
subclass of: SO_0000010

66260204
type: Gene
SIO_000068: ncbigene

position:292403:1
position: 292403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:293290:1
position: 293290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:292403-293290:1:exon

HDEF_RS01490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS01490
old locus tag: HDEF_0289
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857078.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DMT family transporter
translation: MRKLIVFMLFTLVTFTWGTTWMAMKIAVDTIPPIFATGLRFLCAAPVLLYIAWATKTPLLFPSGQRGFQVIVCLFYFAIPFTLTIYGEQFVGSGLASIMFANMPVAVLVASLFFLKEKAHFLQIVGLTLSVTALSYILFQESQTEAQSNLFGILSLVLAVIMHACMYAQCKKRACQVAVVTFNALPCLGAGVILSILGWYAEKPHVQYFSMASLWAVIYLGPFAGIFGILCYFALQQKAGVFQASIAFLIFPLIALSFENLVYGHTLSNRSMISVVPLIFGILLTLIPKKHLKIH
SIO_010081: HDEF_RS01490
subclass of: SO_0000673
so part of: HDEF_RS01490
location: 292403..293290
location: region:292403-293290:1
so has part: feature:292403-293290:1:exon

WP_012738014.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:292403-293290:1:exon

HDEF_RS01495
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: serC
locus tag: HDEF_RS01495
old locus tag: HDEF_0290
so part of: sequence
location: 293367..294473
location: region:293367-294473:1
so has part: feature:293367-294473:1:exon
subclass of: SO_0000010

66260205
type: Gene
SIO_000068: ncbigene

position:293367:1
position: 293367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:294473:1
position: 294473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:293367-294473:1:exon

HDEF_RS01495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: serC
locus tag: HDEF_RS01495
old locus tag: HDEF_0290
EC number: 2.6.1.52
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004710028.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]; GO:0004648 - O-phospho-L-serine:2-oxoglutarate aminotransferase activity [Evidence IEA]
GO process: GO:0006564 - L-serine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 3-phosphoserine/phosphohydroxythreonine transaminase
translation: MPLIYNFSAGPAMLPAEVVFQAEQELAERKKKGISVMEISHRSEFFQKIAKESEQDLKDLLNIPSNYKVLFCQGGARGQFAAVPMNLLGEKKTADYITGGYWSKSAILEAKKYGVPNIIDASVRKPISGVFFQSIKPISEWQLSEDAAYVHYCPNETIEGIAIHAPPIFSHHKDVVADFSSSILSCPIDVDRYGVIYAGAQKNIGPAGLTVVIVRDDLLGKAHQHTPSILNYQVLADTQSMFNTPPTFAWYLSGLVFKWLKDQGGLIEIQKRNREKAQLLYSTIDENEFYLNQVAPTHRSLMNVPFSLSTSTPRLDELFLSEAKKRGLEGLKGHRAATGMRASIYNAMPVEGVQKLTEFMVEFARRYG
SIO_010081: HDEF_RS01495
subclass of: SO_0000673
so part of: HDEF_RS01495
location: 293367..294473
location: region:293367-294473:1
so has part: feature:293367-294473:1:exon

WP_012738015.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:293367-294473:1:exon

HDEF_RS01500
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: gltP
locus tag: HDEF_RS01500
old locus tag: HDEF_0291
pseudo: true
so part of: sequence
location: 294543..295859
location: region:294543-295859:1
so has part: feature:294543-295859:1:exon
subclass of: SO_0000010

66260206
type: Gene
SIO_000068: ncbigene

position:294543:1
position: 294543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:295859:1
position: 295859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:294543-295859:1:exon

HDEF_RS01500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: gltP
locus tag: HDEF_RS01500
old locus tag: HDEF_0291
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857080.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0015293 - symporter activity [Evidence IEA]
GO process: GO:0006835 - dicarboxylic acid transport [Evidence IEA]
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: glutamate/aspartate:proton symporter GltP
SIO_010081: HDEF_RS01500
subclass of: SO_0000673
so part of: HDEF_RS01500
location: 294543..295859
location: region:294543-295859:1
so has part: feature:294543-295859:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:294543-295859:1:exon

HDEF_RS01505
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: rhlE
locus tag: HDEF_RS01505
old locus tag: HDEF_0292
pseudo: true
so part of: sequence
location: 295959..>297197
location: region:295959-297197:1
so has part: feature:295959-297197:1:exon
subclass of: SO_0000010

66260207
type: Gene
SIO_000068: ncbigene

position:295959:1
position: 295959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:297197:1
position: 297197
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:295959-297197:1:exon

HDEF_RS01505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: rhlE
locus tag: HDEF_RS01505
old locus tag: HDEF_0292
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008813941.1
GO function: GO:0003724 - RNA helicase activity [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: ATP-dependent RNA helicase RhlE
SIO_010081: HDEF_RS01505
subclass of: SO_0000673
so part of: HDEF_RS01505
location: 295959..>297197
location: region:295959-297197:1
so has part: feature:295959-297197:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:295959-297197:1:exon

HDEF_RS01510
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS01510
old locus tag: HDEF_0293
so part of: sequence
location: complement(297289..298287)
location: region:297289-298287:-1
so has part: feature:297289-298287:-1:exon
subclass of: SO_0000010

66260208
type: Gene
SIO_000068: ncbigene

position:297289:-1
position: 297289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:298287:-1
position: 298287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:297289-298287:-1:exon

HDEF_RS01510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS01510
old locus tag: HDEF_0293
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLRLGLRQEQPRKPSTKANTEPHQDNAQVEPEAEATEETSAKANTEPHQDNAQVEPEVEAAEETSAKANTEPHQDNAQVGSEAGAAEETSAKANTEPHQDNAQVEPEAEAAEETSAKANTEPDQDNAQAGSEAGAAEETSAKANTEPHQDNAQVEPEAGAAEETSAKANTEPHQDNAQVEPEAEAAEETSAKANTEPHQDNAQAGSEAEAAANVAAKESQVPSSVTESINQQRDHTRPVRSVSGQVIQALQKNLLIQSSPLFQLMTSNIEIMSEIIEPLLNRNSAGANQSLEEAMSSFSGNCSVKAISIPINHTKQIEETNIVKLPAVTATM
SIO_010081: HDEF_RS01510
subclass of: SO_0000673
so part of: HDEF_RS01510
location: complement(297289..298287)
location: region:297289-298287:-1
so has part: feature:297289-298287:-1:exon

WP_012738017.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:297289-298287:-1:exon

HDEF_RS01515
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS01515
so part of: sequence
location: complement(298199..298897)
location: region:298199-298897:-1
so has part: feature:298199-298897:-1:exon
subclass of: SO_0000010

66260209
type: Gene
SIO_000068: ncbigene

position:298199:-1
position: 298199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:298897:-1
position: 298897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:298199-298897:-1:exon

HDEF_RS01515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS01515
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLKKVKLINDEVSFQNEYPEFNSKWSENFARKAVVSSLDPVTNLLMKEEEKFFNDNNDQPQRKITEWFYRKNSKGNERLYQKKITLLKENGEIKDSAIFDKNGNKITTFIEPSLNPDKSSAHHLLDNQGVAVSNANANTVIEDLIAPLSLRHKNMTLILFDLLKALMQEQPDDIKVSFGKYLMKLLEPSANKAPVVKKEPHQDNAQAGSEAGAAEETFYKSQYRTPSRQCSG
SIO_010081: HDEF_RS01515
subclass of: SO_0000673
so part of: HDEF_RS01515
location: complement(298199..298897)
location: region:298199-298897:-1
so has part: feature:298199-298897:-1:exon

WP_044612236.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:298199-298897:-1:exon

HDEF_RS01520
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: purE
locus tag: HDEF_RS01520
old locus tag: HDEF_0294
so part of: sequence
location: 299274..299798
location: region:299274-299798:1
so has part: feature:299274-299798:1:exon
subclass of: SO_0000010

66260210
type: Gene
SIO_000068: ncbigene

position:299274:1
position: 299274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:299798:1
position: 299798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:299274-299798:1:exon

HDEF_RS01520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: purE
locus tag: HDEF_RS01520
old locus tag: HDEF_0294
EC number: 4.1.1.21
EC number: 5.4.99.18
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857128.1
GO component: GO:0009320 - phosphoribosylaminoimidazole carboxylase complex [Evidence IEA]
GO function: GO:0004638 - phosphoribosylaminoimidazole carboxylase activity [Evidence IEA]
GO process: GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 5-(carboxyamino)imidazole ribonucleotide mutase
translation: MTIHVFSSEKIRAKIAIIMGSQSDWDTMKPAADILSELKIAYDAEIISAHRTPDNLFKFAEQAETRGFSVIIAGAGGAAHLPGMIAAKTLLPVLGVPVASTSLNGIDSLYSIVQMPRGIPVGTLAIGKAGAANAALLSAQILGLQDPTLAYRLTEWRKQQTQEVLNHRDPREKK
SIO_010081: HDEF_RS01520
subclass of: SO_0000673
so part of: HDEF_RS01520
location: 299274..299798
location: region:299274-299798:1
so has part: feature:299274-299798:1:exon

WP_012738018.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:299274-299798:1:exon

HDEF_RS01525
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: purK
locus tag: HDEF_RS01525
old locus tag: HDEF_0295
so part of: sequence
location: 299795..300895
location: region:299795-300895:1
so has part: feature:299795-300895:1:exon
subclass of: SO_0000010

66260211
type: Gene
SIO_000068: ncbigene

position:299795:1
position: 299795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:300895:1
position: 300895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:299795-300895:1:exon

HDEF_RS01525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: purK
locus tag: HDEF_RS01525
old locus tag: HDEF_0295
EC number: 6.3.4.18
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857127.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004638 - phosphoribosylaminoimidazole carboxylase activity [Evidence IEA]
GO process: GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 5-(carboxyamino)imidazole ribonucleotide synthase
translation: MKTVYILGQGQLGQMLRQAGEPLGIKVYPLCLEIDESREKRAPPDIITAEIEHWPDNLFVRQWAQHPLLINRDTFPLLADRFTQKQLLDELSLPTAPWQLLTKAELWPKVFSSFDSLAVVKRRKGGYDGKGQWCLRPGEEHSLPSDLYDAACIVEKGIPFSYEISLIGARNHRGQSVFYPITYNWHEAGILRASVAFPTKQQRLQAPAESMLSRIMNKLDYIGVMAMECFVVGNDLLINELAPRVHNSGHWTQNGASISQFELHLRAILDLPLPLPVVSSPSVMLNLIGIHLNPSWLSLPLIHVHWYGKEVRAGRKLGHLNLNDPSINRLIETLDALAPLLPQSDQVGLLKAKEKLENTPKNFTDL
SIO_010081: HDEF_RS01525
subclass of: SO_0000673
so part of: HDEF_RS01525
location: 299795..300895
location: region:299795-300895:1
so has part: feature:299795-300895:1:exon

WP_012738019.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:299795-300895:1:exon

HDEF_RS01530
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: coaE
locus tag: HDEF_RS01530
old locus tag: HDEF_0296
so part of: sequence
location: 301000..301620
location: region:301000-301620:1
so has part: feature:301000-301620:1:exon
subclass of: SO_0000010

66260212
type: Gene
SIO_000068: ncbigene

position:301000:1
position: 301000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:301620:1
position: 301620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:301000-301620:1:exon

HDEF_RS01530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: coaE
locus tag: HDEF_RS01530
old locus tag: HDEF_0296
EC number: 2.7.1.24
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857126.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0004140 - dephospho-CoA kinase activity [Evidence IEA]
GO process: GO:0015937 - coenzyme A biosynthetic process [Evidence IEA]
note: Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dephospho-CoA kinase
translation: MSYIVALTGGVGSGKSTVSDIFASLNVSLIDTDIIARQLVEPGCLAWNEIIKRYGHHILLDGDTLNRAALRQKIFNDQKEKEWLNRLLHPLIEKESLHQMHQSSQPYLIWIVPLLFENHLHHRANRILVVDVSAKTQLLRTMKRDNVTQEEVKKILASQLSQKQRLALADDVISNNGAIEKLPAVVRSLHHQYLKLAACFSSEDLH
SIO_010081: HDEF_RS01530
subclass of: SO_0000673
so part of: HDEF_RS01530
location: 301000..301620
location: region:301000-301620:1
so has part: feature:301000-301620:1:exon

WP_012738020.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:301000-301620:1:exon

HDEF_RS01535
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: ltrA
locus tag: HDEF_RS01535
old locus tag: HDEF_0297
so part of: sequence
location: 302237..303919
location: region:302237-303919:1
so has part: feature:302237-303919:1:exon
subclass of: SO_0000010

66260213
type: Gene
SIO_000068: ncbigene

position:302237:1
position: 302237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:303919:1
position: 303919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:302237-303919:1:exon

HDEF_RS01535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: ltrA
locus tag: HDEF_RS01535
old locus tag: HDEF_0297
EC number: 2.7.7.49
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015873279.1
GO function: GO:0003964 - RNA-directed DNA polymerase activity [Evidence IEA]
GO process: GO:0000373 - Group II intron splicing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: group II intron reverse transcriptase/maturase
translation: MPMANVINQNYEQQLEWHAINWRVVTAMINNLRQRIYRASATGDLKKVRNLQKLMMKSRANHLLAIRKVTQVNRGKHTAGVDNQVINDHKGREHLYKLLSQTTSEKVYPVKRVYIAKKNGKKRPLGIPTILDRCRQAIVKSALEPYWEAKFEPVSYGFRPGRSAHDAIQKIFCIARARGTRHWVLDADIKGAFDNIDHNFLIKKIGGFPERNMIKQWLQAGVLEHGNYIPNVAGTPQGGIISPLLANIALHGMETLLGIQYWKNGTPKQGQPYAVVRYADDFVVFGKSREECETAKIKLQIWLAQRGLALSEEKTSIKHLKEGFDFLGFNIRHYDNRHRKRGYILLTKPSKESMKRYKQQMRMTWKGIIGMPTQEGIRQLNAKIIGWCNYYRIGASKRTFSALDQWMWIRQRRYLYRRHPNKHWWWRRKHYLGKIPGREDYSVFMDKSTGGFLWKHAWTKIQRHWLVPKNASPDNPELRDYWRNRQARKQPFIYGVKVNLYKRQKGYCPLCDQELDNGEQLHVHHIQPKAEGGDNKLANLRLLHANCHRQLHSKKGKMLK
SIO_010081: HDEF_RS01535
subclass of: SO_0000673
so part of: HDEF_RS01535
location: 302237..303919
location: region:302237-303919:1
so has part: feature:302237-303919:1:exon

WP_012738021.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:302237-303919:1:exon

HDEF_RS01545
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS01545
so part of: sequence
location: 304427..304762
location: region:304427-304762:1
so has part: feature:304427-304762:1:exon
subclass of: SO_0000010

66260215
type: Gene
SIO_000068: ncbigene

position:304427:1
position: 304427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:304762:1
position: 304762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:304427-304762:1:exon

HDEF_RS01545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS01545
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTGGFITRNNLAKRILYRSLPIAQDYAIDTGFFGEHTREIVRTGRSILFHHSINQANNAHLVQGWLNSILESMNFSKPMQCIAKLIINKNFGATVLQDSFVERVLTTLTDY
SIO_010081: HDEF_RS01545
subclass of: SO_0000673
so part of: HDEF_RS01545
location: 304427..304762
location: region:304427-304762:1
so has part: feature:304427-304762:1:exon

WP_044612239.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:304427-304762:1:exon

HDEF_RS01550
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS01550
old locus tag: HDEF_0298
so part of: sequence
location: 304805..305467
location: region:304805-305467:1
so has part: feature:304805-305467:1:exon
subclass of: SO_0000010

66260216
type: Gene
SIO_000068: ncbigene

position:304805:1
position: 304805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:305467:1
position: 305467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:304805-305467:1:exon

HDEF_RS01550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS01550
old locus tag: HDEF_0298
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857225.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKLFFAYRNEMLQKILEHSELDNNSVSLKNIQEELENEIDKEIKGHHEHLQYSKLYSMLYKIIKNKNTLKYGTEILDNSDPTLKYNIQVVKNAVLAKLEKMENNKTKNNSKQNFFTKNKTSLTKEQIANMKKIIQEDGIDLSSILSGKTLEVVKQNLNQELRLFSKKYYSIPEDGKKISSKIFIERNKKDAKFELHNLYLLKPQLLKMLSAINSENSENV
SIO_010081: HDEF_RS01550
subclass of: SO_0000673
so part of: HDEF_RS01550
location: 304805..305467
location: region:304805-305467:1
so has part: feature:304805-305467:1:exon

WP_012738022.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:304805-305467:1:exon

HDEF_RS01555
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS01555
old locus tag: HDEF_0299
so part of: sequence
location: complement(305702..306259)
location: region:305702-306259:-1
so has part: feature:305702-306259:-1:exon
subclass of: SO_0000010

66260217
type: Gene
SIO_000068: ncbigene

position:305702:-1
position: 305702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:306259:-1
position: 306259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:305702-306259:-1:exon

HDEF_RS01555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS01555
old locus tag: HDEF_0299
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012738023.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YcbK family protein
translation: MDKIDMHRRKWFILGGAFLGSVLLSPLGLAASRPKPRILEINHTPTGEFIKTEFFDGRKYNKKGLSRLNYIFRDFRANKLKSIDSQLFNQLYRLQNLLGTNKPIQLISGYRTKKTNNLLRKSSSAVAINSFHTLGRAVDFYIEGIPLNKIYKAALRMRAGGVGYYPKSHFIHIDTGPVRNWSSYQ
SIO_010081: HDEF_RS01555
subclass of: SO_0000673
so part of: HDEF_RS01555
location: complement(305702..306259)
location: region:305702-306259:-1
so has part: feature:305702-306259:-1:exon

WP_012738023.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:305702-306259:-1:exon

HDEF_RS01560
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: rlmB
locus tag: HDEF_RS01560
old locus tag: HDEF_0300
so part of: sequence
location: complement(306320..307063)
location: region:306320-307063:-1
so has part: feature:306320-307063:-1:exon
subclass of: SO_0000010

66260218
type: Gene
SIO_000068: ncbigene

position:306320:-1
position: 306320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:307063:-1
position: 307063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:306320-307063:-1:exon

HDEF_RS01560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: rlmB
locus tag: HDEF_RS01560
old locus tag: HDEF_0300
EC number: 2.1.1.185
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857228.1
GO function: GO:0003723 - RNA binding [Evidence IEA]; GO:0008173 - RNA methyltransferase activity [Evidence IEA]
GO process: GO:0006396 - RNA processing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB
translation: MSDIIYGFHSIKAFLEHHPERFLEIFILQNNDSYRLQSLVKELKSAGLSILFTSRQYLDAQTGGGVHQGIMAKVCSAHQYQENELPALLNSLDTPFVLVLDGITDPHNLGACLRSAEASGVQIVILPRDRSAPLNATVKKAASGAAENIPVIRVTNLARTLRVLKEYHLLIIGTAGEAKKTVYEARMTGSMALVMGSEEKGLRRLTREHCDHLIRIPMLGRVSSLNVSVATGVCLFEAVRQRNMKKI
SIO_010081: HDEF_RS01560
subclass of: SO_0000673
so part of: HDEF_RS01560
location: complement(306320..307063)
location: region:306320-307063:-1
so has part: feature:306320-307063:-1:exon

WP_012738024.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:306320-307063:-1:exon

HDEF_RS01565
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: rnr
locus tag: HDEF_RS01565
old locus tag: HDEF_0301
so part of: sequence
location: complement(307056..309404)
location: region:307056-309404:-1
so has part: feature:307056-309404:-1:exon
subclass of: SO_0000010

66260219
type: Gene
SIO_000068: ncbigene

position:307056:-1
position: 307056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:309404:-1
position: 309404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:307056-309404:-1:exon

HDEF_RS01565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: rnr
locus tag: HDEF_RS01565
old locus tag: HDEF_0301
EC number: 3.1.13.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012738025.1
GO function: GO:0004540 - ribonuclease activity [Evidence IEA]
GO process: GO:0016070 - RNA metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribonuclease R
translation: MSQDPFFEREAKKYESPIPSREFILAHLAQRETPVSRIELANDLNLSGEASLEALRRRLKAMERDGQLVFTRRQCYALPERLDLLKGTVIGHRDGFGFLRVEGSKDDLYLSAEQMKKAIHGDVVLVQPLSPDRKGRREARIVRVLVPKKSQIVGRYFVDAGVGFVVPDDARLSFDILIPSEHAQSARMGFLVVVELTQRATYCSKAVGKIIEILGENMGTGIAVDMALRTHEIPYLWSDEIKKEIGQLKEEVPEEAKQGRVDLRALPLMTIDGEDARDFDDAVYCEKKRGGGWRLWVAIADVSYYVRPNTALDDEAKNRSNSVYFPSQVIPMLPEILSNGLCSLNPSVDRLSMVCEMTLSAQGKLSSYRFYEATIKSHARLTYTKVWRILDGEQSLRDQYQPLIPHLEELYAMYKMLDRAREQRGGIAFETEEAKFIFNEQMRIERIEPLLRNDAHKLIEECMILANIAAARFVEKQKEPVLFRVHDRPSDDAMTGLRSVLGELSLALGGDLKPQPKDYAELMCKIADRPDQQMLQTMLLRSMKQAVYDPENRGHFGLALSSYGHFTSPIRRYPDLVMHRAIKYLLWKTSNEQNTKQQDPLKTRSTPTGGWHSTYEEMLELGQHASMAERRADEATRNVADWLKCDFMRDQVGNVFIGIITTVTGFGFFVRLDDFLIDGLVHVSSLDNDYYRYDSIGQRMIGESSGILYRLGDTVKVRVEAVNMDQRKIDFSLVSSDRKPQVKGKTARENAKKTKMKNTKTPPQKKRARTNPKKTTIKKDDE
SIO_010081: HDEF_RS01565
subclass of: SO_0000673
so part of: HDEF_RS01565
location: complement(307056..309404)
location: region:307056-309404:-1
so has part: feature:307056-309404:-1:exon

WP_012738025.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:307056-309404:-1:exon

HDEF_RS01570
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS01570
old locus tag: HDEF_0302
so part of: sequence
location: complement(309482..310792)
location: region:309482-310792:-1
so has part: feature:309482-310792:-1:exon
subclass of: SO_0000010

66260220
type: Gene
SIO_000068: ncbigene

position:309482:-1
position: 309482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:310792:-1
position: 310792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:309482-310792:-1:exon

HDEF_RS01570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS01570
old locus tag: HDEF_0302
EC number: 6.3.4.4
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857230.1
GO function: GO:0004019 - adenylosuccinate synthase activity [Evidence IEA]; GO:0005525 - GTP binding [Evidence IEA]
GO process: GO:0006164 - purine nucleotide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: adenylosuccinate synthase
translation: MGKNIVVLGAQWGDEGKGKIVDLLTERAKYVVRYQGGHNAGHTLISKGKKTVLHLIPSGILRNNTINIIGNGVVLEPHALIKEIKELEMQGVPVRNRLLLSAACPLILPYHVALDNEREKARGSKAIGTTGRGIGPAYEDKVARRALRLGDLFNQITFESQLKEVIEYHNFQLVHYYKAEPVHYQRVVESIWGIADILKNMVIDVTQVLSQAREKAENLLFEGAQGTFLDIDHGTYPYVTSSNTTAGSVATGAGFGPLYIDYILGIVKAYSTRVGAGPFPTELNDETGNFLRDKGHEYGATTGRSRRTGWLDAVSLRQAIQMNSLSGLCMTKLDVLDGLKTVKICVRYKRTDGTETMSTPITSAEWAEVEPIYEALPGWKESTFGIKEKSQLPQTALNYIKRVEELTGVPVDIISTGPDREETIILRHPFDEMIKK
SIO_010081: HDEF_RS01570
subclass of: SO_0000673
so part of: HDEF_RS01570
location: complement(309482..310792)
location: region:309482-310792:-1
so has part: feature:309482-310792:-1:exon

WP_012738026.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:309482-310792:-1:exon

HDEF_RS01575
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS01575
old locus tag: HDEF_0303
so part of: sequence
location: 311050..311673
location: region:311050-311673:1
so has part: feature:311050-311673:1:exon
subclass of: SO_0000010

66260221
type: Gene
SIO_000068: ncbigene

position:311050:1
position: 311050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:311673:1
position: 311673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:311050-311673:1:exon

HDEF_RS01575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS01575
old locus tag: HDEF_0303
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857231.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TIGR04211 family SH3 domain-containing protein
translation: MQKRHCIYLAILSLPISLSAQAAEEERYISDNLTTYVHSGPGDEYRILGVLKAGEPVTLLDVHTTTQYAQIRDKKGRVVWLPAKQLSQVPSQLSRLPDLEQKIKNLTDQLNDTHHRLKERSQEIQEKIALSEKLIEGLKSENKGLKEQLTIRNQQINEIENKTNAEKNNIMMKWFTYGGMVAGTGFILGLLLPFLIPRRKRNHRWMD
SIO_010081: HDEF_RS01575
subclass of: SO_0000673
so part of: HDEF_RS01575
location: 311050..311673
location: region:311050-311673:1
so has part: feature:311050-311673:1:exon

WP_012738027.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:311050-311673:1:exon

HDEF_RS12920
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS12920
pseudo: true
so part of: sequence
location: <311994..312098
location: region:311994-312098:1
so has part: feature:311994-312098:1:exon
subclass of: SO_0000010

70691990
type: Gene
SIO_000068: ncbigene

position:311994:1
position: 311994
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:312098:1
position: 312098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:311994-312098:1:exon

HDEF_RS12920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS12920
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015874248.1
note: catalyzes the formation of D-fructose 1,6-bisphosphate from D-fructose 6-phosphate in glycolysis; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: ATP-dependent 6-phosphofructokinase
SIO_010081: HDEF_RS12920
subclass of: SO_0000673
so part of: HDEF_RS12920
location: <311994..312098
location: region:311994-312098:1
so has part: feature:311994-312098:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:311994-312098:1:exon

HDEF_RS01580
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS01580
old locus tag: HDEF_0304
so part of: sequence
location: 312406..314181
location: region:312406-314181:1
so has part: feature:312406-314181:1:exon
subclass of: SO_0000010

66260222
type: Gene
SIO_000068: ncbigene

position:312406:1
position: 312406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:314181:1
position: 314181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:312406-314181:1:exon

HDEF_RS01580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS01580
old locus tag: HDEF_0304
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012738028.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase family 39 protein
translation: MEKPPFMAWIGAFFIKILPFLPAHESSRFAVVLCICITVWAFLLASRCLHEEISCKKCGPNLTTMPILANWQMNALCLLVGTLGFVEHIHKFTADLGQLAGAMMALSALILVASPTSEKRPSYYGSLFGSGIGIAFLSKGLFILCILGLSVCIFLVVFSDFRHRLSLKFSFFATLTASPFLLIWPWLIYRTHPNLFNEWFWLNNIGRFSGSARLGGNDVTYVDKFVSILFNGAPTSLFLLAGLALLLFRLLRSWSCKLKTTQEKNSIYPAIKTRGYYVAIVFLITGLCTLFVSASMRDLYLLPILPAMILVALPFLHLMESINLKWQKGLNIFFFMMLLIILMTWINLGYNGEATLLGLIWHNVSDVLPLPFVLHTNGMLVALVCFLIICWCRVVRQNDKNIIRSWGCGLAILWSTTALLLIPWIDASRSYEQTFLSMNSVMANRNGCLITEGLGESEIGMLHYVTSKAGISMTFFEKKYSNITENSTLDLFENRSESCELDSPEAATRPPGWCTKADRDGKHTRLLGKVKENLQPSADFLTSALLPRCAFLLVLDEIKFPQKNISPIWTPIWSGGRLTDEKGFTLYYKGL
SIO_010081: HDEF_RS01580
subclass of: SO_0000673
so part of: HDEF_RS01580
location: 312406..314181
location: region:312406-314181:1
so has part: feature:312406-314181:1:exon

WP_238526173.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:312406-314181:1:exon

HDEF_RS01585
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: tyrP
locus tag: HDEF_RS01585
old locus tag: HDEF_0305
so part of: sequence
location: complement(314349..315479)
location: region:314349-315479:-1
so has part: feature:314349-315479:-1:exon
subclass of: SO_0000010

66260223
type: Gene
SIO_000068: ncbigene

position:314349:-1
position: 314349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:315479:-1
position: 315479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:314349-315479:-1:exon

HDEF_RS01585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: tyrP
locus tag: HDEF_RS01585
old locus tag: HDEF_0305
inference: COORDINATES: similar to AA sequence:RefSeq:NP_416420.1
GO component: GO:0005886 - plasma membrane [Evidence IEA]
GO function: GO:0015173 - aromatic amino acid transmembrane transporter activity [Evidence IEA]
GO process: GO:0015801 - aromatic amino acid transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine transporter TyrP
translation: MLAMPLATAGVGFGATLLILILIWLLMSYTALLFLEVYQHHPIQTGLAALAKCYLGKIGYGITGFNMLFLMYALTSAYISGAGELIASTISAWTGQSFSSVGGVLIFTLMGGAVVCVGTHSVDFFNRILFSAKIIFLILMLAVMAPHIRIPHLLTLPLQQGLVLSAIPIIFTSFGFHGSIPSIVHYMGGHVRKLRCVFIVGSAIPLIAYIFWQLVTLGSISSETFIGILAQKTGLNALLEAARTVLNFSHVEVTLHLFSDFALVTSFLGVALGLFDYLADLFKRSDTAKGRFQTGVMTFLPPLIFALFYPNGFIMALGFAAIALAVLALILPALMVWKVRKIHQGNYQVWGGKPGLLLVLGCGFAVMGFQIDSVVL
SIO_010081: HDEF_RS01585
subclass of: SO_0000673
so part of: HDEF_RS01585
location: complement(314349..315479)
location: region:314349-315479:-1
so has part: feature:314349-315479:-1:exon

WP_234809425.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:314349-315479:-1:exon

HDEF_RS01590
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: nrdB
locus tag: HDEF_RS01590
old locus tag: HDEF_0306
so part of: sequence
location: complement(315578..316708)
location: region:315578-316708:-1
so has part: feature:315578-316708:-1:exon
subclass of: SO_0000010

66260224
type: Gene
SIO_000068: ncbigene

position:315578:-1
position: 315578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:316708:-1
position: 316708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:315578-316708:-1:exon

HDEF_RS01590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: nrdB
locus tag: HDEF_RS01590
old locus tag: HDEF_0306
EC number: 1.17.4.1
inference: COORDINATES: similar to AA sequence:RefSeq:YP_005228009.1
GO function: GO:0016491 - oxidoreductase activity [Evidence IEA]
GO process: GO:0009263 - deoxyribonucleotide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: class Ia ribonucleoside-diphosphate reductase subunit beta
translation: MGYTTFSQKKNNQLLEPMFLGQTVNVARYDQQKYPIFEELIEKQLSFFWRPEEIDVSRDRIDYQSLPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWIETWAFSETIHSRSYTHIIRNIVNDPSCIFDDIVTNNEILKRAKDISAYYDDLIKMTSYYHLLDEGTHQVNGKTTVVNLYALKKQLYLCLMSVNALEAIRFYVSFACSFAFAERKLMEGNAKIIKLIARDEALHLMGTQHMLDLMRSGKDDPEMADIAQECQQECSDLFLLAAQQEKEWAAYLFRDGSMIGLNQDILCQYIEYMTNIRMQAVKLDAPFSIRTNPIPWINSWLVSDNVQVAPQEVEVSSYLVGQIDAEIDSNDLKDFKL
SIO_010081: HDEF_RS01590
subclass of: SO_0000673
so part of: HDEF_RS01590
location: complement(315578..316708)
location: region:315578-316708:-1
so has part: feature:315578-316708:-1:exon

WP_012738030.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:315578-316708:-1:exon

HDEF_RS01595
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: nrdA
locus tag: HDEF_RS01595
old locus tag: HDEF_0307
so part of: sequence
location: complement(316744..319032)
location: region:316744-319032:-1
so has part: feature:316744-319032:-1:exon
subclass of: SO_0000010

66260225
type: Gene
SIO_000068: ncbigene

position:316744:-1
position: 316744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:319032:-1
position: 319032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:316744-319032:-1:exon

HDEF_RS01595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: nrdA
locus tag: HDEF_RS01595
old locus tag: HDEF_0307
inference: COORDINATES: similar to AA sequence:RefSeq:NP_461219.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0004748 - ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: class 1a ribonucleoside-diphosphate reductase subunit alpha
translation: MNHSLLVTKRDGRKESIDLDKIHRVINWAAEGLNHVSVSQVELRSQIQFYDGIKTEDIHETMIKAAADLISCEAPDYQYLAARLAIFHLRKKAYGRFEPPPLFEHVSKMVKMGKYDPHLLEDYSEDEFAQMDECIDHWRDMTFSYAAVKQLEGKYLVQNRVNHQIYESAQFLYILVAACLFSRYPASTRLDYIKRFYHAISTFKISLPTPIMAGVRTPTRQFSSCVLIECGDSLDSINATASAIVKYVSQRAGIGVNAGAIRAQGSPIRSGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATVFYPLWHLEVESLLVLKNNRGVEGNRVRHMDYGVQLNKLMYQRLLKGEEITLFSPSDVPGLYAAFFSDQSEFQRLYVQYEADPDIRHKKIKAVELFSLLMQERASTGRIYVQNVDHCNTHSPFDPKVAPVRQSNLCLEIALPTAPLNNINDEKGEIALCTLSAFNLGAINSLDELQELATLSARALDALLDYQHYPIPAAQRSAVSRRTLGIGVINFAYYLARNGVRYSDGSANNLTHRTFEAIQYYLLRASNDLAREQGACPWFDQTRYAKGILPIDTYKKDLDDIHQEPLHYDWASLRQDILKFGLRHSTLSSLMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPEYESLKEAYELLWNIPDNDGYLQLVGLMQKFVDQSISANTNYDPRRFSNGKVPMKQLLTDLLNAYKWGIKTLYYHNTRDGADDVQADVKENLSMDDECSSGGCKI
SIO_010081: HDEF_RS01595
subclass of: SO_0000673
so part of: HDEF_RS01595
location: complement(316744..319032)
location: region:316744-319032:-1
so has part: feature:316744-319032:-1:exon

WP_012738031.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:316744-319032:-1:exon

HDEF_RS01600
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS01600
old locus tag: HDEF_0308
so part of: sequence
location: complement(319341..320579)
location: region:319341-320579:-1
so has part: feature:319341-320579:-1:exon
subclass of: SO_0000010

66260226
type: Gene
SIO_000068: ncbigene

position:319341:-1
position: 319341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:320579:-1
position: 320579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:319341-320579:-1:exon

HDEF_RS01600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS01600
old locus tag: HDEF_0308
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857237.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tight adherance operon protein G
translation: MFSVFLILIYATFEYCRLINEKIKTEQVLEQTSLILTAEDNGDTSGTPGDRNRFLALSHIESFIPSTTATNESIEIISPNQNDLKRKYTITLRNAYSSIFNLFSTMSVSGKAAAQKAYQEEPMDVVFVFSFYRHTIENPLRMSWETRQEINELKEVLIEKINTILEMNPLNKVGFVPFSWGVKEGRYCLQPFVFLFKPNYDNMNFGPAQFKAPRQTEVISKSIDFVKTVNNIPFAMTDSNVISLASLDNRLCGLSLYRDPIPLTREKNEIFMIIKDELIPGYNLISSGILSGVKLLSRGTNSKKLLIIISDTEEAPPMAINDDNKRMLRIRFNNNTLNISESLIKAGMCEKIKNSGIKMYFISTGGSIESHNYWKTQCIGEKNMHNLNNVDDELKQILQASGDDPVGTNVVH
SIO_010081: HDEF_RS01600
subclass of: SO_0000673
so part of: HDEF_RS01600
location: complement(319341..320579)
location: region:319341-320579:-1
so has part: feature:319341-320579:-1:exon

WP_238526174.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:319341-320579:-1:exon

HDEF_RS01605
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: tadF
locus tag: HDEF_RS01605
old locus tag: HDEF_0309
so part of: sequence
location: complement(320727..321362)
location: region:320727-321362:-1
so has part: feature:320727-321362:-1:exon
subclass of: SO_0000010

66260227
type: Gene
SIO_000068: ncbigene

position:320727:-1
position: 320727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:321362:-1
position: 321362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:320727-321362:-1:exon

HDEF_RS01605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: tadF
locus tag: HDEF_RS01605
old locus tag: HDEF_0309
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857238.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tight adherence pilus pseudopilin TadF
translation: MNVFNFFHDKRGSITVELCLVTLFFVLLFFILSTTAQYINTKGRFDSIAYSLSSVLRERTVLYAGQPLLTEAQADQLVRVASELFRDNHMDFNKPGAALVLESLYFEDDPQSPGTNQTQIQNAQTFVRPLSSAQGTPSCSPAESLRAIVERIERTEKRSFSVKKKGRGINHEWIPFYRVTICMPPPDFNLSVFPSHFLPEIKSSSPMMLAR
SIO_010081: HDEF_RS01605
subclass of: SO_0000673
so part of: HDEF_RS01605
location: complement(320727..321362)
location: region:320727-321362:-1
so has part: feature:320727-321362:-1:exon

WP_044612240.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:320727-321362:-1:exon

HDEF_RS01610
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS01610
old locus tag: HDEF_0310
so part of: sequence
location: complement(321349..321813)
location: region:321349-321813:-1
so has part: feature:321349-321813:-1:exon
subclass of: SO_0000010

66260228
type: Gene
SIO_000068: ncbigene

position:321349:-1
position: 321349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:321813:-1
position: 321813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:321349-321813:-1:exon

HDEF_RS01610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS01610
old locus tag: HDEF_0310
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012738034.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TadE/TadG family type IV pilus assembly protein
translation: MKKTSLYQFFRAREGVVMTEFLLCLPMLILLLFLLFELARLFITSISLDLAILKSIQRAKNTPNVNYQATLATELAKQTNQLSPFFDARGANLSLKFYSNLDDFISNHHYSYANSKPLGQYRVEYRYQPFLLPGFLMNFTLIREVLFVQEHERF
SIO_010081: HDEF_RS01610
subclass of: SO_0000673
so part of: HDEF_RS01610
location: complement(321349..321813)
location: region:321349-321813:-1
so has part: feature:321349-321813:-1:exon

WP_012738034.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:321349-321813:-1:exon

HDEF_RS01615
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS01615
old locus tag: HDEF_0311
so part of: sequence
location: complement(321810..322574)
location: region:321810-322574:-1
so has part: feature:321810-322574:-1:exon
subclass of: SO_0000010

66260229
type: Gene
SIO_000068: ncbigene

position:321810:-1
position: 321810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:322574:-1
position: 322574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:321810-322574:-1:exon

HDEF_RS01615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS01615
old locus tag: HDEF_0311
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012738035.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tight adherance operon protein D
translation: MSQKMNRIILSTILILLTGCAVSPKKDYQPDAIKQESVLIKSKNYPGLIALYRNLLQKKEDSTVRLKLSEFYYLSGDNDSSLYYLEPLISKSHDLKKDEKIHLLHVKNLIKKDRNEEAQIIIENILKNNIKSAEWFNLYGISLANTGSFLKAENAFKQSRDLFISDSTVLNNFAVLAILKNDYKKAISFLLPEYLNGNKDPKLIHNLIFCLVQIKDNSYAKKIIEMEKISDYPDKLIKALSQISQPNLSIKGKK
SIO_010081: HDEF_RS01615
subclass of: SO_0000673
so part of: HDEF_RS01615
location: complement(321810..322574)
location: region:321810-322574:-1
so has part: feature:321810-322574:-1:exon

WP_012738035.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:321810-322574:-1:exon

HDEF_RS12925
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS12925
old locus tag: HDEF_0312
so part of: sequence
location: complement(322571..323398)
location: region:322571-323398:-1
so has part: feature:322571-323398:-1:exon
subclass of: SO_0000010

70691991
type: Gene
SIO_000068: ncbigene

position:322571:-1
position: 322571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:323398:-1
position: 323398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:322571-323398:-1:exon

HDEF_RS12925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS12925
old locus tag: HDEF_0312
inference: COORDINATES: protein motif:HMM:NF012694.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II secretion system F family protein
translation: MMFFIFIILCFLGITLLFYSFDRKKRISVYKKVNDKKVETEKNKPALKTKMTYSVIKIPDFLLEKNKIIFCIASLFALIFAAALFFWKIEYSKNILITLFLTSSIFSIGFYQLLIKSIIFRKTRLMLSSFPFFIDMTAACIQAGMTIENALTYSAENFYKINEDIASLIIQVVRKAEVHGLQNAMKTLYQDVSFLEIKMFCNAVQNSVDFGSSVYEHLMKFSTDIREIQLMESEEKISKLSVKLTLILFLFILIPFILLIISTTALELFLGDPFL
SIO_010081: HDEF_RS12925
subclass of: SO_0000673
so part of: HDEF_RS12925
location: complement(322571..323398)
location: region:322571-323398:-1
so has part: feature:322571-323398:-1:exon

WP_012738036.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:322571-323398:-1:exon

HDEF_RS01625
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS01625
old locus tag: HDEF_0313
so part of: sequence
location: complement(323400..324014)
location: region:323400-324014:-1
so has part: feature:323400-324014:-1:exon
subclass of: SO_0000010

66260230
type: Gene
SIO_000068: ncbigene

position:323400:-1
position: 323400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:324014:-1
position: 324014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:323400-324014:-1:exon

HDEF_RS01625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS01625
old locus tag: HDEF_0313
inference: COORDINATES: protein motif:HMM:NF012694.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II secretion system F family protein
translation: MCFVFAIIFIAFIIFIQILYYKKQKKIYFTETFPELLLIFNMGSVSGISVNEILKKAGQEIKGGLGKECDLIFRRLSIGENINTVFYDAYQRFSYPEFYMFINILMLNINQGGQLRELMHRLNQVVTNYNKMEKRKMAMTGEIRMSIWVVTLIPVIFFAFSYFMNPLSFQKIFSYEIGKIIIYYCLASNTLGIFIMRYMFRKAI
SIO_010081: HDEF_RS01625
subclass of: SO_0000673
so part of: HDEF_RS01625
location: complement(323400..324014)
location: region:323400-324014:-1
so has part: feature:323400-324014:-1:exon

WP_148206994.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:323400-324014:-1:exon

HDEF_RS01630
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS01630
old locus tag: HDEF_0314
pseudo: true
so part of: sequence
location: complement(324283..325576)
location: region:324283-325576:-1
so has part: feature:324283-325576:-1:exon
subclass of: SO_0000010

66260231
type: Gene
SIO_000068: ncbigene

position:324283:-1
position: 324283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:325576:-1
position: 325576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:324283-325576:-1:exon

HDEF_RS01630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS01630
old locus tag: HDEF_0314
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015683744.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: CpaF family protein
SIO_010081: HDEF_RS01630
subclass of: SO_0000673
so part of: HDEF_RS01630
location: complement(324283..325576)
location: region:324283-325576:-1
so has part: feature:324283-325576:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:324283-325576:-1:exon

HDEF_RS01635
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS01635
old locus tag: HDEF_0315
so part of: sequence
location: complement(325588..326721)
location: region:325588-326721:-1
so has part: feature:325588-326721:-1:exon
subclass of: SO_0000010

66260232
type: Gene
SIO_000068: ncbigene

position:325588:-1
position: 325588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:326721:-1
position: 326721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:325588-326721:-1:exon

HDEF_RS01635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS01635
old locus tag: HDEF_0315
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012738038.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSLFLSKNSIHSQNNQRPSENLVAILSKNTELSGKISEQVYLSGIQNIKEMSLDFSELTHVDFPDALSGVILDIGSHKDVDFILNFVQRQIPSGAWCVLIGSNDSIRVAQQFTEQGLLYLHADSQITELTQHLIKGISIKKLRNSFLISVLGCRGGVGSSLLSYQLAQSINELKNSLILLSQGKQGSQDIDLITESKIGNTVFNYQKNLDILFLGEKSISNIEENLQKKYHFIIFDQPIYLFKREDLEKYINHSHVVVLVLDHSMTSVRVAKNFINIFERFKKNNQKSTRIITCVNENRPKTKDMFAIPDIESLLERSIDIKIPYIKNAKNFVHSPYYYEKHKKNLLKLSQSILGLKDIPFYLQKGWLTPFLKMIKK
SIO_010081: HDEF_RS01635
subclass of: SO_0000673
so part of: HDEF_RS01635
location: complement(325588..326721)
location: region:325588-326721:-1
so has part: feature:325588-326721:-1:exon

WP_012738038.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:325588-326721:-1:exon

HDEF_RS01640
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS01640
old locus tag: HDEF_0316
so part of: sequence
location: complement(326726..327178)
location: region:326726-327178:-1
so has part: feature:326726-327178:-1:exon
subclass of: SO_0000010

66260233
type: Gene
SIO_000068: ncbigene

position:326726:-1
position: 326726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:327178:-1
position: 327178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:326726-327178:-1:exon

HDEF_RS01640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS01640
old locus tag: HDEF_0316
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857889.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKYIFIGISLIFLTLSLKAGPVQPPKGSYFYLPEKEIKSYEVHHLNKKMIFDDIIKIYKNTPSLNIKLLLPIKSSLKSGIILKKELMTMNIPAGVILVERANPYSFEKKNQHIMIYLKERNEETTNCDEKHLGCAVNANRHNSIIHLKSE
SIO_010081: HDEF_RS01640
subclass of: SO_0000673
so part of: HDEF_RS01640
location: complement(326726..327178)
location: region:326726-327178:-1
so has part: feature:326726-327178:-1:exon

WP_012738039.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:326726-327178:-1:exon

HDEF_RS01645
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS01645
old locus tag: HDEF_0317
so part of: sequence
location: complement(327175..328446)
location: region:327175-328446:-1
so has part: feature:327175-328446:-1:exon
subclass of: SO_0000010

66260234
type: Gene
SIO_000068: ncbigene

position:327175:-1
position: 327175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:328446:-1
position: 328446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:327175-328446:-1:exon

HDEF_RS01645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS01645
old locus tag: HDEF_0317
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004709715.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: pilus assembly protein N-terminal domain-containing protein
translation: MSEGESLVIKKKQNIDTVFVSNPAVADYKIVDHNTVIIYAKAEGKSEFTFFEPNQNISYHATVMVDNIIKVVSDKIRMLYPESQVQIEKIGKSYLLTGMAPTEEVRDNIVRMVGESIQSPKSNDKDTVSVRLDISDKGDASETTENVNSSLTNKVYERLINQIQLPVSNQVNVKLSIVEVSKEFKDNIGFEWANLGTFSFHKFNFTADRITHLVNALQDDSIARVLAEPNLSVLSGESASFLVGGEIPYVKDRDASNRASIDFKEFGIKLSVTAKVNENKRVKVMLSEEISSVIGNTKAEEFTMPSLKKRRANTTVELADGESFVLGGLMNQEEQEALQKVPFIGDIPILGSFFRHTKTNNRSIELIVVATVNLVKPIPSKEITLPDFMKTSSIARFLNLSVIKNISQKKEAEAFLGKGGFIQ
SIO_010081: HDEF_RS01645
subclass of: SO_0000673
so part of: HDEF_RS01645
location: complement(327175..328446)
location: region:327175-328446:-1
so has part: feature:327175-328446:-1:exon

WP_086935028.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:327175-328446:-1:exon

HDEF_RS01650
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS01650
old locus tag: HDEF_0318
so part of: sequence
location: complement(328560..329387)
location: region:328560-329387:-1
so has part: feature:328560-329387:-1:exon
subclass of: SO_0000010

66260235
type: Gene
SIO_000068: ncbigene

position:328560:-1
position: 328560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:329387:-1
position: 329387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:328560-329387:-1:exon

HDEF_RS01650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS01650
old locus tag: HDEF_0318
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857890.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNYRVVLLFSILIIVIGVFGLLTNNKDDKKDLITNATNVISEKKVYVLLAKAKENLAIGALLNNKDYILSHQELPESSPLVKNNLSPLSSIEGFLLKNNLEKNAYITRTMIAEPESPDFIKFNLESGKMIYTFKIGKKNQYLLNLFHPGDHVSLQLRTAESSNSNQINNPDHISIKSNNSSTNNNQDYVLTKIIPDIQIVSIKKYSDEESSKINKNNKNYTLGYIDVSIKVSDLETIFMTEQSGDLILVPMKGSSQENKLSTIMPKLKVIKELRG
SIO_010081: HDEF_RS01650
subclass of: SO_0000673
so part of: HDEF_RS01650
location: complement(328560..329387)
location: region:328560-329387:-1
so has part: feature:328560-329387:-1:exon

WP_012738041.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:328560-329387:-1:exon

HDEF_RS01660
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS01660
so part of: sequence
location: complement(330048..330287)
location: region:330048-330287:-1
so has part: feature:330048-330287:-1:exon
subclass of: SO_0000010

66260236
type: Gene
SIO_000068: ncbigene

position:330048:-1
position: 330048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:330287:-1
position: 330287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:330048-330287:-1:exon

HDEF_RS01660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS01660
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRNIFIKPYVFCQTYFRQFIKDTRGATLVEYVILIGVVVGLGAVLKTPLEKLIKDGVENIPAITTSTSSAGAGAGGGSN
SIO_010081: HDEF_RS01660
subclass of: SO_0000673
so part of: HDEF_RS01660
location: complement(330048..330287)
location: region:330048-330287:-1
so has part: feature:330048-330287:-1:exon

WP_044612241.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:330048-330287:-1:exon

HDEF_RS01665
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: tolC
locus tag: HDEF_RS01665
old locus tag: HDEF_0321
so part of: sequence
location: 330774..332153
location: region:330774-332153:1
so has part: feature:330774-332153:1:exon
subclass of: SO_0000010

66260237
type: Gene
SIO_000068: ncbigene

position:330774:1
position: 330774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:332153:1
position: 332153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:330774-332153:1:exon

HDEF_RS01665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: tolC
locus tag: HDEF_RS01665
old locus tag: HDEF_0321
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016856919.1
GO function: GO:0015562 - efflux transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: outer membrane channel protein TolC
translation: MKKKRHFFLIGLNLLCFSSLSEAENLLQVYQQAKSSNPDLRSAAAERDIAYEKINESRSSLLPQIGLSGLYGYQEGLRSNTNLKSNKATASLQLRQTLFNMSKWREMTSNQKSAGIQEVDFQVKEQKLLLSTATAYFNVLRTIDILSFTESRKTAIYRKLDETTQRLNVGLVAITDVQNARADYDMILADEVKARNELDNALEALREISGGDYASLSTVNVDRLKVSRPEPVNQLVKEAEQKNLELLVARLSQDFARHQIKLAQAGHMPTLNLNASSEFSNIYKRKGPSSEKSYNGENSVSINLDIPLYQGGFTHSKVEQAQHNFVRLSEKLVSKKREVFKNLRSSFNNISAAISGINAYQQAVVSAKSSLNSMEAGYNVGTRTILDVLKSTYELYDAKQKLSNARYDYLINTLNIKYSLGTLNESDLASINNLLEKSVSTSATTLAPEVSTLTKKRKF
SIO_010081: HDEF_RS01665
subclass of: SO_0000673
so part of: HDEF_RS01665
location: 330774..332153
location: region:330774-332153:1
so has part: feature:330774-332153:1:exon

WP_012738044.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:330774-332153:1:exon

HDEF_RS01670
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: crr
locus tag: HDEF_RS01670
old locus tag: HDEF_0322
so part of: sequence
location: complement(332270..332782)
location: region:332270-332782:-1
so has part: feature:332270-332782:-1:exon
subclass of: SO_0000010

66260238
type: Gene
SIO_000068: ncbigene

position:332270:-1
position: 332270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:332782:-1
position: 332782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:332270-332782:-1:exon

HDEF_RS01670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: crr
locus tag: HDEF_RS01670
old locus tag: HDEF_0322
EC number: 2.7.1.199
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015833547.1
GO process: GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PTS glucose transporter subunit IIA
translation: MGLIDKLKSWLSSDDKQLNRIIDIYSPISGEIIPIEQVPDVVFAEKIVGDGIAIKPTGSKIRAPIDGTIGKIFETNHAFSMQSDNGIELFVHFGIDTVELKGEGFKRIGKEGQYVQKGEVILEFDLPLLLNKAKSCLTPVVISNMDEMKEMIKLTGQVKAGETPILRIRK
SIO_010081: HDEF_RS01670
subclass of: SO_0000673
so part of: HDEF_RS01670
location: complement(332270..332782)
location: region:332270-332782:-1
so has part: feature:332270-332782:-1:exon

WP_012738045.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:332270-332782:-1:exon

HDEF_RS01675
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: ptsI
locus tag: HDEF_RS01675
old locus tag: HDEF_0323
so part of: sequence
location: complement(332919..334643)
location: region:332919-334643:-1
so has part: feature:332919-334643:-1:exon
subclass of: SO_0000010

66260239
type: Gene
SIO_000068: ncbigene

position:332919:-1
position: 332919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:334643:-1
position: 334643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:332919-334643:-1:exon

HDEF_RS01675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: ptsI
locus tag: HDEF_RS01675
old locus tag: HDEF_0323
EC number: 2.7.3.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016856917.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphoenolpyruvate-protein phosphotransferase PtsI
translation: MISGILVSEGIAFAKAYLLVENEITINSNHISPALIDFEIDRFISARTKSSEQLAAIRAKAKMTLGEEKAVIFDGHILLLEDEEFEKDVIHRIKNKNVSADSAVHFLIEAQAKELEELDDEYLKERAVDIRDIGKRLLKNMLGLPVTDLGSMTEEVILVAVDLTPSETAQLDLEKVLGFITDLGGRTSHTSIMARSLELPAIVGTKDATKQIKNGDNLILDGINNRVYVNPTQDIINKLMELKHQYMTEKEELVQLKNLPAVTHDGHQVEIFANIGTENDIPGAKNNGAEGIGLYRTEFLFMNRNDFPTEQEQFENYKAVAETMSPKPVIIRTMDIGGDKDLPYMNLPKEQNPFLGWRAIRISLDRKDILHTQLRAILRASAFGKLKIIFPMIISVEEIRILKSEIELLKEQLRGKKINFDEKIQIGIMVETPSAAINAHHLAKEVDFFSIGTNDLTQYTLAVDRGNELIAHIYNPMSPSVLNLIKRVIDASHSEGKWTGMCGEFAGDKSAACLLLGMGLDEFSMSAIAIPKIKGIIRKTKFSEAKKLAEEVLSQSTTEDIMHVLSRFSKTESK
SIO_010081: HDEF_RS01675
subclass of: SO_0000673
so part of: HDEF_RS01675
location: complement(332919..334643)
location: region:332919-334643:-1
so has part: feature:332919-334643:-1:exon

WP_012738046.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:332919-334643:-1:exon

HDEF_RS01680
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: ptsH
locus tag: HDEF_RS01680
old locus tag: HDEF_0324
so part of: sequence
location: complement(334695..334952)
location: region:334695-334952:-1
so has part: feature:334695-334952:-1:exon
subclass of: SO_0000010

66260240
type: Gene
SIO_000068: ncbigene

position:334695:-1
position: 334695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:334952:-1
position: 334952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:334695-334952:-1:exon

HDEF_RS01680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: ptsH
locus tag: HDEF_RS01680
old locus tag: HDEF_0324
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003038086.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphocarrier protein Hpr
translation: MFEQEVTIEAPNGLHTRPAAQFVKEAKQFKCDIKVISDGKSASAKSLFKLQTLGLAEGTSIVISAEGEDEKKAVEYLVKLLAELK
SIO_010081: HDEF_RS01680
subclass of: SO_0000673
so part of: HDEF_RS01680
location: complement(334695..334952)
location: region:334695-334952:-1
so has part: feature:334695-334952:-1:exon

WP_012738047.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:334695-334952:-1:exon

HDEF_RS01685
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS01685
old locus tag: HDEF_0325
so part of: sequence
location: complement(335124..336920)
location: region:335124-336920:-1
so has part: feature:335124-336920:-1:exon
subclass of: SO_0000010

66260241
type: Gene
SIO_000068: ncbigene

position:335124:-1
position: 335124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:336920:-1
position: 336920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:335124-336920:-1:exon

HDEF_RS01685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS01685
old locus tag: HDEF_0325
EC number: 3.6.4.13
inference: COORDINATES: protein motif:HMM:NF008642.0
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003724 - RNA helicase activity [Evidence IEA]
GO process: GO:0000027 - ribosomal large subunit assembly [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DEAD/DEAH family ATP-dependent RNA helicase
translation: MTIELPISFSKLGLSPSILSALTDLGYEKPSPIQLECIPHLLNGSDVLGMAQTGSGKTAAFGLPLLQNIKPDIKAPQILVLAPTRELAVQVAQALTNFSKYMKGINVLALYGGQPYHVQLKALRQGPQIVVGTPGRLLDHLKRGTLNLSSLTGLVLDEADEMLRMGFIEDVENILAKIPAEHQTALFSATMPDAIRRITRRFMKEPKEVRIHSNVTTKPDINQSYWPVFGMRKNQALVRFLEVEDFDAAIIFVRTKNATLEVAEALEDSGYNSAALNGDMNQSLREQTLERLKDGRLDILIATDVAARGLDVDRISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLKNIERVIKQPIPEIQLPKAELLSQRRLEKFAATVRQHIESSDLEMYKTLLKKLRPEEPFDLEMIAAALLKMAQSERPLILPPDPVRSARRECHEREVRSTHRRRDYRDSSERPSYRERRDIGEMQLYRIEVGRNDGVEIRHIVGAIANEGDISSRYIGNISLFPSHSTIELPKEMHKNIVSHCTRTHILNKPINIKLLGDCPEERRERRPSSERRSTRSLSDQNRPYDAQHRRSFAGVAR
SIO_010081: HDEF_RS01685
subclass of: SO_0000673
so part of: HDEF_RS01685
location: complement(335124..336920)
location: region:335124-336920:-1
so has part: feature:335124-336920:-1:exon

WP_012738048.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:335124-336920:-1:exon

HDEF_RS01690
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: pnp
locus tag: HDEF_RS01690
old locus tag: HDEF_0327
so part of: sequence
location: complement(337424..339574)
location: region:337424-339574:-1
so has part: feature:337424-339574:-1:exon
subclass of: SO_0000010

66260242
type: Gene
SIO_000068: ncbigene

position:337424:-1
position: 337424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:339574:-1
position: 339574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:337424-339574:-1:exon

HDEF_RS01690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: pnp
locus tag: HDEF_RS01690
old locus tag: HDEF_0327
EC number: 2.7.7.8
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016856914.1
GO function: GO:0004654 - polyribonucleotide nucleotidyltransferase activity [Evidence IEA]
GO process: GO:0006402 - mRNA catabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: polyribonucleotide nucleotidyltransferase
translation: MFTPTICRFDYGQLKVTIETGMMARQATAAVMVIIEGTAVLVTVVAQKEAKPGQTFFPLSVHYQERSYAVGRIPSNFFRRETRPNEGETLTSRLIDRPIRPLFPKDFLNEVQVIATVVSVNPKVNPDIVAMIGASAVLSLSGIPFHEPIGAARVGFINGAYVLNPTPEELKQSDLNLVVAGTKNAVLMVESEANILTEEQMLGAIIFGHEQQQIVIESINDLVKKAGKLKWPFTPKIVDEKLRSCITEEDKKDLSNAYLITDKQERYAKLNEIKTNIIERILKENETVNAEQIQDILYNFEKNLVRQRILKDEPRIDGRDKDMIRALHACTGILPRTHGSALFTRGETQALVTTTLGTSRDLQTIDDLMGERSDSFLFHYNFPPYSVGETGMLGSPKRREIGHARLAKRALMAVMPNIEEFPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKSAVAGIAMGLVKEEDKFVVLSDILGDEDHLGDMDFKVAGTSEGITALQMDMKIQGITPEIMQSALHHAKAARLHILSVMNQVISSASSTISQYAPHIYNIKINPEKIKDVIGKGGAVIRALSDETDTKIDISDDGNITIAALSQKSAAFAQQRIEEITANIEVGRIYQGTVTRIADYGAFVSIASAKEGLVHISQIAEGRVEKVTDHLKLKQQVSVKVLEIDRQGRIRLSIKDAIADTSEHKIEDTPVDSSFEESQKQ
SIO_010081: HDEF_RS01690
subclass of: SO_0000673
so part of: HDEF_RS01690
location: complement(337424..339574)
location: region:337424-339574:-1
so has part: feature:337424-339574:-1:exon

WP_012738050.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:337424-339574:-1:exon

HDEF_RS01695
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: rpsO
locus tag: HDEF_RS01695
old locus tag: HDEF_0328
so part of: sequence
location: complement(339732..340001)
location: region:339732-340001:-1
so has part: feature:339732-340001:-1:exon
subclass of: SO_0000010

66260243
type: Gene
SIO_000068: ncbigene

position:339732:-1
position: 339732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:340001:-1
position: 340001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:339732-340001:-1:exon

HDEF_RS01695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: rpsO
locus tag: HDEF_RS01695
old locus tag: HDEF_0328
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004933502.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosomal protein S15
translation: MSLNAEQKAKVVLEHGSSAHDTGSTEVQVALLTLRINDLQKHFLEHKKDHHSRRGLLRMVSQRRKLLDYLKKRNISKYTDLIQSLGLRK
SIO_010081: HDEF_RS01695
subclass of: SO_0000673
so part of: HDEF_RS01695
location: complement(339732..340001)
location: region:339732-340001:-1
so has part: feature:339732-340001:-1:exon

WP_012738051.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:339732-340001:-1:exon

HDEF_RS01700
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: truB
locus tag: HDEF_RS01700
old locus tag: HDEF_0329
so part of: sequence
location: complement(340251..341192)
location: region:340251-341192:-1
so has part: feature:340251-341192:-1:exon
subclass of: SO_0000010

66260244
type: Gene
SIO_000068: ncbigene

position:340251:-1
position: 340251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:341192:-1
position: 341192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:340251-341192:-1:exon

HDEF_RS01700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: truB
locus tag: HDEF_RS01700
old locus tag: HDEF_0329
EC number: 5.4.99.25
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012738052.1
GO function: GO:0004730 - pseudouridylate synthase activity [Evidence IEA]
GO process: GO:0006400 - tRNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA pseudouridine(55) synthase TruB
translation: MKSKRRHSGRDVNGILLLDKPKNFSSNQVLQKVKSLFAARRAGHTGALDPLATGMLPICLGEATKFSPFLLNADKRYRVTAYLGHKTETSDAEGSVINKREITFTQPQLEEALEKFRGPILQIPSMYSALKHQGRPLYEYARQGVTLDREARRITVFDLQCLRWEGHELELEIHCSKGTYIRTIVDDLGEVLGCGAYVSDLRRLQVADYTHDSMVTLEKLEELTLKNNTLGSAIDLLLLPIESTALHLPEVNLESGAAACIKQGQPVSFFDNPTDTMVRLTEGGERHFIGIGIIDAHGRIAPKRLLRNVSDAL
SIO_010081: HDEF_RS01700
subclass of: SO_0000673
so part of: HDEF_RS01700
location: complement(340251..341192)
location: region:340251-341192:-1
so has part: feature:340251-341192:-1:exon

WP_012738052.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:340251-341192:-1:exon

HDEF_RS01705
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: rbfA
locus tag: HDEF_RS01705
old locus tag: HDEF_0330
so part of: sequence
location: complement(341182..341598)
location: region:341182-341598:-1
so has part: feature:341182-341598:-1:exon
subclass of: SO_0000010

66260245
type: Gene
SIO_000068: ncbigene

position:341182:-1
position: 341182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:341598:-1
position: 341598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:341182-341598:-1:exon

HDEF_RS01705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: rbfA
locus tag: HDEF_RS01705
old locus tag: HDEF_0330
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016943784.1
GO function: GO:0019843 - rRNA binding [Evidence IEA]
GO process: GO:0006396 - RNA processing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 30S ribosome-binding factor RbfA
translation: MMKEFSRAQRVSHEIQKEIALILQREIKDPRVGMVTVSSVKMSRDLAYAKIFVTFLNDLTENMAPDHHHADGIKALQEASGYIRVLLGKAMCLRIVPHLTFIYDDSLIEGIRMYNLATHATKSDQKHQKTDSNIKNEI
SIO_010081: HDEF_RS01705
subclass of: SO_0000673
so part of: HDEF_RS01705
location: complement(341182..341598)
location: region:341182-341598:-1
so has part: feature:341182-341598:-1:exon

WP_044612440.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:341182-341598:-1:exon

HDEF_RS01710
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: infB
locus tag: HDEF_RS01710
old locus tag: HDEF_0331
so part of: sequence
location: complement(341666..344314)
location: region:341666-344314:-1
so has part: feature:341666-344314:-1:exon
subclass of: SO_0000010

66260246
type: Gene
SIO_000068: ncbigene

position:341666:-1
position: 341666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:344314:-1
position: 344314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:341666-344314:-1:exon

HDEF_RS01710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: infB
locus tag: HDEF_RS01710
old locus tag: HDEF_0331
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002223151.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0003743 - translation initiation factor activity [Evidence IEA]
GO process: GO:0006413 - translational initiation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: translation initiation factor IF-2
translation: MTDVTVKSLAEEIKTSVDRLVQQFFDAGIKKSQTDTVTQQEKEKLLAHLNRQQGTVDNQLTLQRKTRSVLNIQVTGGKSKTVHIEVRKKRTYVNPSVTKPEAPLPEEENAQIPKITKNTFSQESLNKTSPQKSLKTKAIEKAKIESPKKERHSLKEKQKKEAQSEKARREAEASSLKRFAEEEVRRKVEEEAKRVAEQARKMAIENEAKWSELVADQIDSVDYHVTTSEHARAAEDENDAKVEGDRRSRHRGTKTTKQKKTNKLSESKTDREEARAVVRKSKRKPSALQQSFNKPVVALNRDVVIGETISVAELANKMAVKGSQVIKAMMKLGAMATINQVIDQETAQLVAEEMGHKVILRRENELEEALMSDRDTGVLTVHRAPVVTIMGHVDHGKTSLLDYIRSTKVATGEAGGITQHIGAYHVETENGMITFLDTPGHAAFTSMRARGAQATDIVVLVVAADDGVMPQTIEAIQHAKAAKVPVVVAVNKIDKAEADPDRVKKELIQHGIQPEEWGGDSQFIHVSAKVGTGIDDLLNAILLQAEVLELKAVKSGMANGVVIESFLDKGRGPVATVLVQEGTLNKGDIVLCGFQYGRVRAMRNELGREVISAGPSIPVEILGLSSVSSAGDAVTVVRDEKKAREVALYRQGKFREIKLARQQKSKLENMFDSLREGEISELNIVLKSDVQGSCEAIREALQKLSTDEVKIKIIGSGVGGITETDATLAAASNAIILGFNVRADAATRRLVEAENLNLRYYSVIYDLLDEVKQAMSGMLSPKYEQKIIGLAEVRDVFKSPKFGAIAGCMVVEGLIKRSSPIRVLRNNVVIYEGELESLRRFKDDVNEVRNGIECGIGVKNYDVQVNDTIEVFEIIEIKRTIS
SIO_010081: HDEF_RS01710
subclass of: SO_0000673
so part of: HDEF_RS01710
location: complement(341666..344314)
location: region:341666-344314:-1
so has part: feature:341666-344314:-1:exon

WP_012738054.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:341666-344314:-1:exon

HDEF_RS01715
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: nusA
locus tag: HDEF_RS01715
old locus tag: HDEF_0332
so part of: sequence
location: complement(344424..345908)
location: region:344424-345908:-1
so has part: feature:344424-345908:-1:exon
subclass of: SO_0000010

66260247
type: Gene
SIO_000068: ncbigene

position:344424:-1
position: 344424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:345908:-1
position: 345908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:344424-345908:-1:exon

HDEF_RS01715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: nusA
locus tag: HDEF_RS01715
old locus tag: HDEF_0332
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012738055.1
GO process: GO:0006353 - DNA-templated transcription termination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transcription termination factor NusA
translation: MNKEILAVVEAVSNEKSLPREKIFEALESALATATKKKYDQDVEVRIKINRKTGDFDTFRRWLAVDIVTSPTREITLEAAQFQDSQIQLGDYVEDQIESVIFDRITTQTAKQVIVQKVREAERAMLVEQFRQHQGKIVTGVVKKATRENIYLDLGNNTEGIIGREDMLPRENIRTGDRIRGVLYDVRPEARGAQLFISRSRPEMLIELFRIEVPEIGEELIEIKAAARDPASRAKIAVKSNDKRIDPVGACVGMRGARVQAVSTELGGERIDIILWDDNPVQFVINAMAPAEVVSVTIDEDKHTMDIAVEATHLAQAIGRNGQNVRLASRLSGWELNVMTAEELQSKNQAEVDSIVHTFIQHLNIDKEFAEVLIEEGLSSLEELVCVPIEELLEIEGLDEETVNALRDRAKKTLTTLALAENFSGNSPSDDLLNLPNMDSKIAFRLSASGISTLEDLAEQSIDDLADIEGLSNDKAGELIMAARGICWFSDDNT
SIO_010081: HDEF_RS01715
subclass of: SO_0000673
so part of: HDEF_RS01715
location: complement(344424..345908)
location: region:344424-345908:-1
so has part: feature:344424-345908:-1:exon

WP_012738055.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:344424-345908:-1:exon

HDEF_RS01720
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: rimP
locus tag: HDEF_RS01720
old locus tag: HDEF_0333
so part of: sequence
location: complement(345932..346384)
location: region:345932-346384:-1
so has part: feature:345932-346384:-1:exon
subclass of: SO_0000010

66260248
type: Gene
SIO_000068: ncbigene

position:345932:-1
position: 345932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:346384:-1
position: 346384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:345932-346384:-1:exon

HDEF_RS01720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: rimP
locus tag: HDEF_RS01720
old locus tag: HDEF_0333
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004125659.1
GO process: GO:0042274 - ribosomal small subunit biogenesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribosome maturation factor RimP
translation: MSILVKKLKKIITAPVEGLGYELVGIEFIQSRQSVLRIYIDHEEGVTVDSCADVSKEVSLVLDVEDPITVPYNLEISSPGLDRPLFTARHYAQFIGEKVNLMLRMAIQNQRKWQGIIKSVDGESIIVAVNQKDEVFALSNIQKANLVPHF
SIO_010081: HDEF_RS01720
subclass of: SO_0000673
so part of: HDEF_RS01720
location: complement(345932..346384)
location: region:345932-346384:-1
so has part: feature:345932-346384:-1:exon

WP_016856908.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:345932-346384:-1:exon

HDEF_RS01725
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS01725
old locus tag: HDEF_0335
so part of: sequence
location: complement(346653..346729)
location: region:346653-346729:-1
so has part: feature:346653-346729:-1:exon
subclass of: SO_0000663

66260249
type: Gene
SIO_000068: ncbigene

position:346653:-1
position: 346653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:346729:-1
position: 346729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:346653-346729:-1:exon

HDEF_RS01725
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 572265
locus tag: HDEF_RS01725
old locus tag: HDEF_0335
product: tRNA-Met
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(346693..346695),aa:Met,seq:cat)
SIO_010081: HDEF_RS01725
subclass of: SO_0000673
so part of: HDEF_RS01725
location: complement(346653..346729)
location: region:346653-346729:-1
so has part: feature:346653-346729:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:346653-346729:-1:exon

HDEF_RS01730
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS01730
old locus tag: HDEF_0336
so part of: sequence
location: complement(346798..346884)
location: region:346798-346884:-1
so has part: feature:346798-346884:-1:exon
subclass of: SO_0000663

66260250
type: Gene
SIO_000068: ncbigene

position:346798:-1
position: 346798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:346884:-1
position: 346884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:346798-346884:-1:exon

HDEF_RS01730
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 572265
locus tag: HDEF_RS01730
old locus tag: HDEF_0336
product: tRNA-Leu
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(346848..346850),aa:Leu,seq:gag)
SIO_010081: HDEF_RS01730
subclass of: SO_0000673
so part of: HDEF_RS01730
location: complement(346798..346884)
location: region:346798-346884:-1
so has part: feature:346798-346884:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:346798-346884:-1:exon

HDEF_RS01735
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: secG
locus tag: HDEF_RS01735
old locus tag: HDEF_0337
so part of: sequence
location: complement(346959..347288)
location: region:346959-347288:-1
so has part: feature:346959-347288:-1:exon
subclass of: SO_0000010

66260251
type: Gene
SIO_000068: ncbigene

position:346959:-1
position: 346959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:347288:-1
position: 347288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:346959-347288:-1:exon

HDEF_RS01735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: secG
locus tag: HDEF_RS01735
old locus tag: HDEF_0337
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016856907.1
GO component: GO:0005886 - plasma membrane [Evidence IEA]
GO function: GO:0015450 - protein-transporting ATPase activity [Evidence IEA]
GO process: GO:0043952 - protein transport by the Sec complex [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: preprotein translocase subunit SecG
translation: MYHALLIFFLLISILLVGCIMLQQGKGADVGASFGAGVSTSLFGSNGSGNFMTRMTSVLATLFFIISLILGNIATNKKSEWENLNQPEKSGQAKKTENPVNKPQTDIPQ
SIO_010081: HDEF_RS01735
subclass of: SO_0000673
so part of: HDEF_RS01735
location: complement(346959..347288)
location: region:346959-347288:-1
so has part: feature:346959-347288:-1:exon

WP_012738058.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:346959-347288:-1:exon

HDEF_RS01740
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: ychF
locus tag: HDEF_RS01740
old locus tag: HDEF_0338
so part of: sequence
location: 347628..348719
location: region:347628-348719:1
so has part: feature:347628-348719:1:exon
subclass of: SO_0000010

66260252
type: Gene
SIO_000068: ncbigene

position:347628:1
position: 347628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:348719:1
position: 348719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:347628-348719:1:exon

HDEF_RS01740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: ychF
locus tag: HDEF_RS01740
old locus tag: HDEF_0338
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001538644.1
GO function: GO:0005525 - GTP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: redox-regulated ATPase YchF
translation: MGFKCAIVGLPNVGKSTLFNALTQAGIEAANFPFCTIEPNKGIVPVPDLRLEQLEAIIQPKSVVHTHMEFVDIAGLVKGASKGDGLGNQFLSHIRETEAIAQVVRCFDDDNIIHVAGRVNPGEDIDIINTELALSDLETCERALDRIQKKAKGGDQSAKIESTTLEKCLSFLKPGKMLRTLDLTKEEKNTVAYLNFLTLKPTMYIANVDENGFENNPHLDKVYQIAEKEKAVVVSVCAAIEADLIELEEKERVAFMAYMGLTEPGLNRVIRAGYQLLNLQTYFTAGVKEVRAWTIPIGATAPQAAGKIHTDFEKGFIRAQTISFSDFIAFQGEQGAKEFGKIRSEGKNYIVQDGDIMNFLFNV
SIO_010081: HDEF_RS01740
subclass of: SO_0000673
so part of: HDEF_RS01740
location: 347628..348719
location: region:347628-348719:1
so has part: feature:347628-348719:1:exon

WP_012738059.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:347628-348719:1:exon

HDEF_RS01745
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: pabB
locus tag: HDEF_RS01745
old locus tag: HDEF_0339
so part of: sequence
location: complement(348769..350151)
location: region:348769-350151:-1
so has part: feature:348769-350151:-1:exon
subclass of: SO_0000010

66260253
type: Gene
SIO_000068: ncbigene

position:348769:-1
position: 348769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:350151:-1
position: 350151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:348769-350151:-1:exon

HDEF_RS01745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: pabB
locus tag: HDEF_RS01745
old locus tag: HDEF_0339
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006705503.1
GO process: GO:0009396 - folic acid-containing compound biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aminodeoxychorismate synthase component 1
translation: MIFKKLNYQPDALLQYFSSFSGQPWAVLLHSGFAQHAHNRFDIMAADPLVTLTTSEKNTEIVRHLHMASDVIEKSELDPFMLLKQELNKLNLTAEPQSDLPFLGGALGLFGYDLGRRIERLPEKNQKDIDLPDMAIGIYDWALIADHHKKKLTLVCHNHIELRLQWLEEQKNKASHFTQPFKLNSGWQSSMSREAYGQKFRQIKKYLHQGDCYQINLAQRFSADYQGDEWQAFLHLSQNNRAPFSAFMRLPNNTVLSLSPERFLYLKNNHIQTRPVKGTLPRLPDKAQDEQQASRLASSKKDRAENLMIVDLLRNDIGRVAQPGTVKVPELFVVETFPAVHHLVSTIADRLRQEYTCTDLLRACFPGGSVTGVPKVRAMEIIEELEPHRRNLYCGNMGYISLCGTMDTNITIRTLLTERGKIHCWAGGAIVADSEEQAEYQETLDKIARILPQLKTGLNK
SIO_010081: HDEF_RS01745
subclass of: SO_0000673
so part of: HDEF_RS01745
location: complement(348769..350151)
location: region:348769-350151:-1
so has part: feature:348769-350151:-1:exon

WP_012738060.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:348769-350151:-1:exon

HDEF_RS01750
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS01750
old locus tag: HDEF_0340
so part of: sequence
location: complement(350203..351048)
location: region:350203-351048:-1
so has part: feature:350203-351048:-1:exon
subclass of: SO_0000010

66260254
type: Gene
SIO_000068: ncbigene

position:350203:-1
position: 350203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:351048:-1
position: 351048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:350203-351048:-1:exon

HDEF_RS01750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS01750
old locus tag: HDEF_0340
EC number: 3.4.23.-
EC number: 3.4.23.43
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016856905.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: A24 family peptidase
translation: MMIQLKMLENMPFIFVVIFIFGLVIGSFLNVVIYRYPKMLEHAWRLEAENELGIPSKKTERFDFILPPSHCIECQTPLRFYDKIPLLSWLYLKGQCRFCRKKIGLRYPAVELFTGIAFTLPVIFWGLSFWSMAIMGCSVLLIILSLIDVDHLWLPNSLNYALLWLGLLVALLGYSPLNLSQAVSGVMIGYFALWSLYWGFKFLSGREGLGSGDFLLFGALGAWVGVQNLIYVALISSFSGILFTLLSGRTKDKIPFGIWLALGGWSVLLFPGFMGLLSKST
SIO_010081: HDEF_RS01750
subclass of: SO_0000673
so part of: HDEF_RS01750
location: complement(350203..351048)
location: region:350203-351048:-1
so has part: feature:350203-351048:-1:exon

WP_048901544.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:350203-351048:-1:exon

HDEF_RS01755
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: gspS2
locus tag: HDEF_RS01755
old locus tag: HDEF_0341
so part of: sequence
location: complement(351045..351443)
location: region:351045-351443:-1
so has part: feature:351045-351443:-1:exon
subclass of: SO_0000010

66260255
type: Gene
SIO_000068: ncbigene

position:351045:-1
position: 351045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:351443:-1
position: 351443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:351045-351443:-1:exon

HDEF_RS01755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: gspS2
locus tag: HDEF_RS01755
old locus tag: HDEF_0341
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016856904.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II secretion system pilot lipoprotein GspS-beta
translation: MFYQLIFFLLIFILNGCVKPVAIDPASTLAKKQVDKIRPYLPVKSEHYVLMMAHHQANKINMIFMQEQGAEFTKSPDQFLEEYKKQLCASNEILNVLQQNVQYDMSISGSWNKPLARMSLSYKDCLYKTEKP
SIO_010081: HDEF_RS01755
subclass of: SO_0000673
so part of: HDEF_RS01755
location: complement(351045..351443)
location: region:351045-351443:-1
so has part: feature:351045-351443:-1:exon

WP_044612242.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:351045-351443:-1:exon

HDEF_RS01760
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS01760
old locus tag: HDEF_0342
so part of: sequence
location: complement(351526..352008)
location: region:351526-352008:-1
so has part: feature:351526-352008:-1:exon
subclass of: SO_0000010

66260256
type: Gene
SIO_000068: ncbigene

position:351526:-1
position: 351526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:352008:-1
position: 352008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:351526-352008:-1:exon

HDEF_RS01760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS01760
old locus tag: HDEF_0342
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016856903.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II secretion system protein M
translation: MKQRWHHLSLRERYFLIGGVFCLLTFLSYSLVWQPLQKKILLAQKKLEQHRQLLHQIHLAKPALKEWLNRRHQNAILPDESLSNIVHQSAAQAGMEIIKMQEEEKALRVWIAEVSFKKLVSWLFDLQYRHGIQTAYLDLVETGIPGIVEVQRLEFIRDIK
SIO_010081: HDEF_RS01760
subclass of: SO_0000673
so part of: HDEF_RS01760
location: complement(351526..352008)
location: region:351526-352008:-1
so has part: feature:351526-352008:-1:exon

WP_012738063.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:351526-352008:-1:exon

HDEF_RS01765
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: gspL
locus tag: HDEF_RS01765
old locus tag: HDEF_0343
so part of: sequence
location: complement(352019..353275)
location: region:352019-353275:-1
so has part: feature:352019-353275:-1:exon
subclass of: SO_0000010

66260257
type: Gene
SIO_000068: ncbigene

position:352019:-1
position: 352019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:353275:-1
position: 353275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:352019-353275:-1:exon

HDEF_RS01765
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: gspL
locus tag: HDEF_RS01765
old locus tag: HDEF_0343
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016856902.1
GO component: GO:0015627 - type II protein secretion system complex [Evidence IEA]
GO process: GO:0015628 - protein secretion by the type II secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II secretion system protein GspL
translation: MTDILVIRLPEKADQSVHWIHYSVNEDLIKDYGKLNQVSELTELSALSLRSDIQVLLPGQQVSIQSCLLPKRAEKKIDQALPALLEDSVADNIERLHFVALEVVKERVTVAVIAHSYIQTCLDWLAHAGLQATRMIPDWLALPYQEGEITAVKLGNDWLFREGTYQGFTLEQECLPILYLVKAGQDQTRDSTLNQNIRSFSSPPEDSSFFWQAGAVIPALTVLARGCLSPNITLLSGPYRQNRTIRMPLLKGAAAVCMAILCFVILSVIEKGLIFHRLTQEIKKTQIKAEQAYQALFLKPQKVVNLKAQFNALTNQMKSQPKVPHLMDFLAQIAIGIANMRIQPRDMHWFALRYAREHHSLYLQIGVNHFSEFEQLRNGLSEKFTVEQGVLVQEKKRVNSTFTLKNKTVEANHLKVTK
SIO_010081: HDEF_RS01765
subclass of: SO_0000673
so part of: HDEF_RS01765
location: complement(352019..353275)
location: region:352019-353275:-1
so has part: feature:352019-353275:-1:exon

WP_012738064.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:352019-353275:-1:exon

HDEF_RS01770
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: gspK
locus tag: HDEF_RS01770
old locus tag: HDEF_0344
so part of: sequence
location: complement(353272..354261)
location: region:353272-354261:-1
so has part: feature:353272-354261:-1:exon
subclass of: SO_0000010

66260258
type: Gene
SIO_000068: ncbigene

position:353272:-1
position: 353272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:354261:-1
position: 354261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:353272-354261:-1:exon

HDEF_RS01770
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: gspK
locus tag: HDEF_RS01770
old locus tag: HDEF_0344
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016856901.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0009306 - protein secretion [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II secretion system minor pseudopilin GspK
translation: MKKSLQQPGMALLMVLILLSVFSVLALEMTERLQQNMRRVETQKLSQQAYWYAIAAESLAISQLTRSLAHKKEVTLAQGWAKSSGVYPLKEASIRLELSDFQTCFNMNALIDPFSQSKKKKSPRIQLIALLNMLHIPPYEASNMANHIVEFMNRPKPEIEPGDPKVNNSFMLSKPAVSTSGRFLMDESELRVVKSITAQKYRLLKTYICVLPTSSQQLNLNTLKPDKAQVLAALLTPHLSLRQAKQILLARPEKGWRDLNEVFRLPELDGLNVKIQQKLRAYLTLSSDYFMLRAQINMSRGEDFVLNSLLAREGSGPFYVLRHQSGELE
SIO_010081: HDEF_RS01770
subclass of: SO_0000673
so part of: HDEF_RS01770
location: complement(353272..354261)
location: region:353272-354261:-1
so has part: feature:353272-354261:-1:exon

WP_044612243.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:353272-354261:-1:exon

HDEF_RS01775
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: gspJ
locus tag: HDEF_RS01775
old locus tag: HDEF_0346
so part of: sequence
location: complement(354347..354952)
location: region:354347-354952:-1
so has part: feature:354347-354952:-1:exon
subclass of: SO_0000010

66260259
type: Gene
SIO_000068: ncbigene

position:354347:-1
position: 354347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:354952:-1
position: 354952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:354347-354952:-1:exon

HDEF_RS01775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: gspJ
locus tag: HDEF_RS01775
old locus tag: HDEF_0346
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012738067.1
GO component: GO:0015627 - type II protein secretion system complex [Evidence IEA]
GO process: GO:0015628 - protein secretion by the type II secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II secretion system minor pseudopilin GspJ
translation: MRRKPISNGFTLLELLTAISIFSLMSLLAYALMDGVTRFQKAGMEITQNIEAYQKTMQWLHRDITHMVFHISESNFHAGVGVLDSDSGGMIMVSGGLPNPSMALKRSHLFKVGYRVKKNSLERLTWSLDALNRQSAETQKPQIDVLLTDVEQLHLRFYQDRQWIHEWNSKNVSAVHLQIKHKQKGTVERIFLLTGYGLLKS
SIO_010081: HDEF_RS01775
subclass of: SO_0000673
so part of: HDEF_RS01775
location: complement(354347..354952)
location: region:354347-354952:-1
so has part: feature:354347-354952:-1:exon

WP_012738067.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:354347-354952:-1:exon

HDEF_RS01780
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: gspI
locus tag: HDEF_RS01780
old locus tag: HDEF_0347
pseudo: true
so part of: sequence
location: complement(354949..>355323)
location: region:354949-355323:-1
so has part: feature:354949-355323:-1:exon
subclass of: SO_0000010

66260260
type: Gene
SIO_000068: ncbigene

position:354949:-1
position: 354949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:355323:-1
position: 355323
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:354949-355323:-1:exon

HDEF_RS01780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: gspI
locus tag: HDEF_RS01780
old locus tag: HDEF_0347
inference: COORDINATES: protein motif:HMM:TIGR01707.1
GO component: GO:0015627 - type II protein secretion system complex [Evidence IEA]
GO process: GO:0015628 - protein secretion by the type II secretion system [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: type II secretion system minor pseudopilin GspI
SIO_010081: HDEF_RS01780
subclass of: SO_0000673
so part of: HDEF_RS01780
location: complement(354949..>355323)
location: region:354949-355323:-1
so has part: feature:354949-355323:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:354949-355323:-1:exon

HDEF_RS01785
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: gspH
locus tag: HDEF_RS01785
old locus tag: HDEF_0348
so part of: sequence
location: complement(355346..355876)
location: region:355346-355876:-1
so has part: feature:355346-355876:-1:exon
subclass of: SO_0000010

66260261
type: Gene
SIO_000068: ncbigene

position:355346:-1
position: 355346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:355876:-1
position: 355876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:355346-355876:-1:exon

HDEF_RS01785
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: gspH
locus tag: HDEF_RS01785
old locus tag: HDEF_0348
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016856898.1
GO component: GO:0015627 - type II protein secretion system complex [Evidence IEA]
GO process: GO:0015628 - protein secretion by the type II secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II secretion system minor pseudopilin GspH
translation: MGSNGFTLIESMLVIFLIGLMGAMILMTAPRKEKTGLKEEAKRFYRLLQLTQEEAFIKGQMHGIRFYRDGYEIMRRKKGQWQRIKKITLPPDIFLRLTFNHTFEEPAEDAPEIFSYESDWHDETISEKTLPQIWLLGQSVIPAFELEFHHAQKGPIWAAELKENREMNLNHIGVIQ
SIO_010081: HDEF_RS01785
subclass of: SO_0000673
so part of: HDEF_RS01785
location: complement(355346..355876)
location: region:355346-355876:-1
so has part: feature:355346-355876:-1:exon

WP_012738069.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:355346-355876:-1:exon

HDEF_RS01790
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: gspG
locus tag: HDEF_RS01790
old locus tag: HDEF_0349
so part of: sequence
location: complement(355877..356347)
location: region:355877-356347:-1
so has part: feature:355877-356347:-1:exon
subclass of: SO_0000010

66260262
type: Gene
SIO_000068: ncbigene

position:355877:-1
position: 355877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:356347:-1
position: 356347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:355877-356347:-1:exon

HDEF_RS01790
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: gspG
locus tag: HDEF_RS01790
old locus tag: HDEF_0349
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016856897.1
GO component: GO:0015627 - type II protein secretion system complex [Evidence IEA]
GO process: GO:0015628 - protein secretion by the type II secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II secretion system major pseudopilin GspG
translation: MNHFKKTMSLNHTTARGFTLLEIMVVIVILGVLASLVIPNLMGNKEKADQQKVISDIVALETSLDMYKLDNDLYPTTEQGLQSLISKPMRSPEPLHYRKQGYIKRLPKDPWGHPYQYIHPGEKGVMDIYSLGMDGEEGGEGNAADIGNWNLHEYQK
SIO_010081: HDEF_RS01790
subclass of: SO_0000673
so part of: HDEF_RS01790
location: complement(355877..356347)
location: region:355877-356347:-1
so has part: feature:355877-356347:-1:exon

WP_100096778.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:355877-356347:-1:exon

HDEF_RS13465
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS13465
so part of: sequence
location: complement(356344..356469)
location: region:356344-356469:-1
so has part: feature:356344-356469:-1:exon
subclass of: SO_0000010

78823909
type: Gene
SIO_000068: ncbigene

position:356344:-1
position: 356344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:356469:-1
position: 356469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:356344-356469:-1:exon

HDEF_RS13465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS13465
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MMTLVISIFEPVLIIIMSGIVLFIVIAILQPILALNNMVNL
SIO_010081: HDEF_RS13465
subclass of: SO_0000673
so part of: HDEF_RS13465
location: complement(356344..356469)
location: region:356344-356469:-1
so has part: feature:356344-356469:-1:exon

WP_268802463.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:356344-356469:-1:exon

HDEF_RS12805
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS12805
so part of: sequence
location: complement(356488..356727)
location: region:356488-356727:-1
so has part: feature:356488-356727:-1:exon
subclass of: SO_0000010

66262124
type: Gene
SIO_000068: ncbigene

position:356488:-1
position: 356488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:356727:-1
position: 356727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:356488-356727:-1:exon

HDEF_RS12805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS12805
inference: COORDINATES: protein motif:HMM:NF012694.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II secretion system F family protein
translation: MLSGSQIPLVEGMSIVAKVSSNKYVEQQVLAAAEQIRQGRSLLFSLSKSRLFSPMMLHMIASGERSGELNIMLERASDN
SIO_010081: HDEF_RS12805
subclass of: SO_0000673
so part of: HDEF_RS12805
location: complement(356488..356727)
location: region:356488-356727:-1
so has part: feature:356488-356727:-1:exon

WP_268802506.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:356488-356727:-1:exon

HDEF_RS01800
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: ltrA
locus tag: HDEF_RS01800
old locus tag: HDEF_0351
so part of: sequence
location: complement(356814..358496)
location: region:356814-358496:-1
so has part: feature:356814-358496:-1:exon
subclass of: SO_0000010

66260263
type: Gene
SIO_000068: ncbigene

position:356814:-1
position: 356814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:358496:-1
position: 358496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:356814-358496:-1:exon

HDEF_RS01800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: ltrA
locus tag: HDEF_RS01800
old locus tag: HDEF_0351
EC number: 2.7.7.49
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015873279.1
GO function: GO:0003964 - RNA-directed DNA polymerase activity [Evidence IEA]
GO process: GO:0000373 - Group II intron splicing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: group II intron reverse transcriptase/maturase
translation: MPMANVINQNYEQQLEWHAINWRVVTAMINNLRQRIYRASATGDLKKVRNLQKLMMKSRANHLLAIRKVTQVNRGKHTAGVDNQVINDHKGREHLYKLLSQTTSEKVYPVKRVYIAKKNGKKRPLGIPTILDRCRQAIVKSALEPYWEAKFEPVSYGFRPGRSAHDAIQKIFCIARARGTRHWVLDADIKGAFDNIDHNFLIKKIGGFPERNMIKQWLQAGVLEHGNYIPNVAGTPQGGIISPLLANIALHGMETLLGIQYWKNGTPKQGQPYAVVRYADDFVVFGKSREECETAKIKLQIWLAQRGLALSEEKTSIKHLKEGFDFLGFNIRHYDNRHRKRGYILLTKPSKESMKRYKQQMRMTWKGIIGMPTQEGIRQLNAKIIGWCNYYRIGASKRTFSALDQWMWIRQRRYLYRRHPNKHWWWRRKHYLGKIPGREDYSVFMDKSTGGFLWKHAWTKIQRHWLVPKNASPDNPELRDYWRNRQARKQPFIYGVKVNLYKRQKGYCPLCDQELDNGEQLHVHHIQPKAEGGDNKLANLRLLHANCHRQLHSKKGKMLK
SIO_010081: HDEF_RS01800
subclass of: SO_0000673
so part of: HDEF_RS01800
location: complement(356814..358496)
location: region:356814-358496:-1
so has part: feature:356814-358496:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:356814-358496:-1:exon

HDEF_RS01805
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: rne
locus tag: HDEF_RS01805
old locus tag: HDEF_0352
pseudo: true
so part of: sequence
location: 359335..>361839
location: region:359335-361839:1
so has part: feature:359335-361839:1:exon
subclass of: SO_0000010

66260264
type: Gene
SIO_000068: ncbigene

position:359335:1
position: 359335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:361839:1
position: 361839
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:359335-361839:1:exon

HDEF_RS01805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: rne
locus tag: HDEF_RS01805
old locus tag: HDEF_0352
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006541874.1
GO function: GO:0008995 - ribonuclease E activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO process: GO:0006396 - RNA processing [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: ribonuclease E
SIO_010081: HDEF_RS01805
subclass of: SO_0000673
so part of: HDEF_RS01805
location: 359335..>361839
location: region:359335-361839:1
so has part: feature:359335-361839:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:359335-361839:1:exon

HDEF_RS01810
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: pyrC
locus tag: HDEF_RS01810
old locus tag: HDEF_0353
so part of: sequence
location: 362228..363274
location: region:362228-363274:1
so has part: feature:362228-363274:1:exon
subclass of: SO_0000010

66260265
type: Gene
SIO_000068: ncbigene

position:362228:1
position: 362228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:363274:1
position: 363274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:362228-363274:1:exon

HDEF_RS01810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: pyrC
locus tag: HDEF_RS01810
old locus tag: HDEF_0353
EC number: 3.5.2.3
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011192610.1
GO function: GO:0004151 - dihydroorotase activity [Evidence IEA]
GO process: GO:0009220 - pyrimidine ribonucleotide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dihydroorotase
translation: MTIVSQILKIRRPDDWHVHLRDGDMLQAVLPYTSAVFRRAIIMPNLISPIKTVREAVEYKNRILNALPSGHSFLPLMTCYLTDDFPVKELTSGFEQGIFTAAKLYPAHATTNSSKGVSDIPALYPLFEQMQKLGMPLLVHGEVASQQVDIFDREAIFIEQVLEPLRKHFPALKIVFEHVTTKEAVNYVKEGGRFLGATITPQHLLFHRNDMLAGGIRPHLFCLPILKRSEHQKALRDAVSSGHPRFFLGTDSAPHTQKNKESACGCAGVFNAVSAVPIYASIFEEMNALEHLEAFCSLNGAHFYGLPENQDFIELIKVPFIQPKEILIGKESLIPFLAGEQINWSIKK
SIO_010081: HDEF_RS01810
subclass of: SO_0000673
so part of: HDEF_RS01810
location: 362228..363274
location: region:362228-363274:1
so has part: feature:362228-363274:1:exon

WP_044612442.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:362228-363274:1:exon

HDEF_RS01815
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: erpA
locus tag: HDEF_RS01815
old locus tag: HDEF_0354
so part of: sequence
location: 363332..363676
location: region:363332-363676:1
so has part: feature:363332-363676:1:exon
subclass of: SO_0000010

66260266
type: Gene
SIO_000068: ncbigene

position:363332:1
position: 363332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:363676:1
position: 363676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:363332-363676:1:exon

HDEF_RS01815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: erpA
locus tag: HDEF_RS01815
old locus tag: HDEF_0354
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012738073.1
GO function: GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
GO process: GO:0016226 - iron-sulfur cluster assembly [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: iron-sulfur cluster insertion protein ErpA
translation: MNHPTRLPLDFTEAAARKFKELIANEHNSNKKLRVYVEGGGCNGFKYMFTLDDKVNEGDLAINKQGVSLVVDPLSLGYLIGGIVDYVESIEYSRFIVKNLNAKTTCGCGSSFSV
SIO_010081: HDEF_RS01815
subclass of: SO_0000673
so part of: HDEF_RS01815
location: 363332..363676
location: region:363332-363676:1
so has part: feature:363332-363676:1:exon

WP_012738073.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:363332-363676:1:exon

HDEF_RS01820
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: cgtA
locus tag: HDEF_RS01820
old locus tag: HDEF_0355
so part of: sequence
location: complement(363708..364796)
location: region:363708-364796:-1
so has part: feature:363708-364796:-1:exon
subclass of: SO_0000010

66260267
type: Gene
SIO_000068: ncbigene

position:363708:-1
position: 363708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:364796:-1
position: 364796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:363708-364796:-1:exon

HDEF_RS01820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: cgtA
locus tag: HDEF_RS01820
old locus tag: HDEF_0355
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857781.1
GO function: GO:0005525 - GTP binding [Evidence IEA]
GO process: GO:0042254 - ribosome biogenesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Obg family GTPase CgtA
translation: MKFVDEASIQVESGDGGNGCVSFRREKYIPYGGPNGGDGGDGGHVYLITDENINTLIDYRFVRIFRAESGHNGQSCDCTGKRGQDITLKVPVGTRVLDCATGEILADMVRREQKVMVAKGGFHGLGNTRFKSSINRAPRQRTLGSLGEKRDLTLELLLLADVGLLGLPNAGKSTFVRSISSAKPKVADYPFTTLIPSLGVVRVDQAESFVVADIPGLIKGAAQGAGLGIHFLKHLERCQVLLHLVDIVPIDGSDPAENVKMIVNELEQYNTNLAEKPRWLVFNKADVLCSKATEETAKNIVKSLGWNEKYYIISATKSTGLDPLCRDIMNFLKSHPRILSDSKNAPDKSEFIWDNQHETHEK
SIO_010081: HDEF_RS01820
subclass of: SO_0000673
so part of: HDEF_RS01820
location: complement(363708..364796)
location: region:363708-364796:-1
so has part: feature:363708-364796:-1:exon

WP_012738074.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:363708-364796:-1:exon

HDEF_RS01825
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: mltC
locus tag: HDEF_RS01825
old locus tag: HDEF_0356
so part of: sequence
location: complement(364800..365879)
location: region:364800-365879:-1
so has part: feature:364800-365879:-1:exon
subclass of: SO_0000010

66260268
type: Gene
SIO_000068: ncbigene

position:364800:-1
position: 364800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:365879:-1
position: 365879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:364800-365879:-1:exon

HDEF_RS01825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: mltC
locus tag: HDEF_RS01825
old locus tag: HDEF_0356
EC number: 4.2.2.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857780.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0008933 - lytic transglycosylase activity [Evidence IEA]
GO process: GO:0000270 - peptidoglycan metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: membrane-bound lytic murein transglycosylase MltC
translation: MKKIAILFLMILLLISCSKKKNQENHLDYIKDTNSFDILMGQFAHNIENIWGFNEILMAGPQDYVKYTDQYQTRSHINFKAGSITVETIATIDPKSHLGNAMIATLLMGDDPTSVDLYSDLNDITISQHPFLYGQVLDNHHQPIRSQWAARHFADYLLKTKIQKRRSGIHLIWSITLKLVPNHIDQRARKYWPFIKHASVKYGIETSLILAIIQTESSFNPYAVSSSDALGLMQVMRHTAGKDVFQMKGKNGQPSRSYLFNPKNNIDVGTAYLFILKNSYLKAIRNPISRRYAIITGYNGGAGSVLRVFAKDKNKAIQVINRMKPDDVFHILSTRHSASESRRYLLKVNRLQKKYLYKG
SIO_010081: HDEF_RS01825
subclass of: SO_0000673
so part of: HDEF_RS01825
location: complement(364800..365879)
location: region:364800-365879:-1
so has part: feature:364800-365879:-1:exon

WP_012738075.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:364800-365879:-1:exon

HDEF_RS01830
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS01830
old locus tag: HDEF_0357
so part of: sequence
location: complement(365912..366184)
location: region:365912-366184:-1
so has part: feature:365912-366184:-1:exon
subclass of: SO_0000010

66260269
type: Gene
SIO_000068: ncbigene

position:365912:-1
position: 365912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:366184:-1
position: 366184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:365912-366184:-1:exon

HDEF_RS01830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS01830
old locus tag: HDEF_0357
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012738076.1
GO function: GO:0005506 - iron ion binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: oxidative damage protection protein
translation: MSRTIFCTFLKKEAIGQDFQIYPGDIGRRIYDDISQEAWSLWLNKQTMLINEKKLSMIHHEDRALLEREMIQFLFEGKDVHVSGYIPPKD
SIO_010081: HDEF_RS01830
subclass of: SO_0000673
so part of: HDEF_RS01830
location: complement(365912..366184)
location: region:365912-366184:-1
so has part: feature:365912-366184:-1:exon

WP_012738076.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:365912-366184:-1:exon

HDEF_RS01835
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: mutY
locus tag: HDEF_RS01835
old locus tag: HDEF_0358
so part of: sequence
location: complement(366177..367271)
location: region:366177-367271:-1
so has part: feature:366177-367271:-1:exon
subclass of: SO_0000010

66260270
type: Gene
SIO_000068: ncbigene

position:366177:-1
position: 366177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:367271:-1
position: 367271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:366177-367271:-1:exon

HDEF_RS01835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: mutY
locus tag: HDEF_RS01835
old locus tag: HDEF_0358
EC number: 3.2.2.31
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012738077.1
GO function: GO:0019104 - DNA N-glycosylase activity [Evidence IEA]
GO process: GO:0006281 - DNA repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: A/G-specific adenine glycosylase
translation: MQAKKFSEMLVNWYHQHGRKTLPWQLNKTPYRVWLSEVMLQQTQVVTVIPYFQRFVTRFPNIKALAQASLDEVLHLWTGLGYYARARNLHKAAQTIFAQHQGQFPLAFSDIIALPGIGRSTAGAILSLAMGQSFPILDGNVKRVLARCYAIEGWPNKKEVEQTLWNLSEERMLLSDAAAFNQAMMDLGAMICTRSTPKCTICPLQIGCLAFANHSWADYPAKKPKKIRPEKTAYFLLIQNGEQIWLEQRPPIGLWGGLFCFPEFNKASELALWLNIRGLKEEDLSPLARFRHTFTHFHLDILPFLLKTKGLNNRCMEKERGLWYHLSEPPSIGLAAPVKRLLLQLNMNNKKCSHKNKKRENRYE
SIO_010081: HDEF_RS01835
subclass of: SO_0000673
so part of: HDEF_RS01835
location: complement(366177..367271)
location: region:366177-367271:-1
so has part: feature:366177-367271:-1:exon

WP_012738077.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:366177-367271:-1:exon

HDEF_RS01840
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: trmB
locus tag: HDEF_RS01840
old locus tag: HDEF_0359
so part of: sequence
location: 367397..368122
location: region:367397-368122:1
so has part: feature:367397-368122:1:exon
subclass of: SO_0000010

66260271
type: Gene
SIO_000068: ncbigene

position:367397:1
position: 367397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:368122:1
position: 368122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:367397-368122:1:exon

HDEF_RS01840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: trmB
locus tag: HDEF_RS01840
old locus tag: HDEF_0359
EC number: 2.1.1.33
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012738078.1
GO function: GO:0008176 - tRNA (guanine-N7-)-methyltransferase activity [Evidence IEA]
GO process: GO:0006400 - tRNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA (guanosine(46)-N7)-methyltransferase TrmB
translation: MLSILKETEALRPIRSFVRRQGRLTKAQKWALDQYWPQMGVDYQNSLIDTTQLFRRKAPLVLEIGFGMGDSLVTTATLNPEQDFLGVEVHIPGIGACLRSAHAAHVTNVRIICHDAVEVLKHMIADHSLEKVQLFFPDPWHKARHHKRRIVQRPFLELVKRKLKVGGWCHMATDWQPYAEHMLKVISTIDGYKNLSVSEDYVERPESRPLTKFETRGKKLGHGVWDLVFEKITKESLKKGE
SIO_010081: HDEF_RS01840
subclass of: SO_0000673
so part of: HDEF_RS01840
location: 367397..368122
location: region:367397-368122:1
so has part: feature:367397-368122:1:exon

WP_012738078.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:367397-368122:1:exon

HDEF_RS01845
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS01845
old locus tag: HDEF_0360
so part of: sequence
location: complement(368129..368204)
location: region:368129-368204:-1
so has part: feature:368129-368204:-1:exon
subclass of: SO_0000663

66260272
type: Gene
SIO_000068: ncbigene

position:368129:-1
position: 368129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:368204:-1
position: 368204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:368129-368204:-1:exon

HDEF_RS01845
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 572265
locus tag: HDEF_RS01845
old locus tag: HDEF_0360
product: tRNA-Asn
inference: COORDINATES: profile:tRNAscan-SE:2.0.12
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(368169..368171),aa:Asn,seq:gtt)
SIO_010081: HDEF_RS01845
subclass of: SO_0000673
so part of: HDEF_RS01845
location: complement(368129..368204)
location: region:368129-368204:-1
so has part: feature:368129-368204:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:368129-368204:-1:exon

HDEF_RS01850
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: rsmI
locus tag: HDEF_RS01850
old locus tag: HDEF_0361
so part of: sequence
location: complement(368330..369202)
location: region:368330-369202:-1
so has part: feature:368330-369202:-1:exon
subclass of: SO_0000010

66260273
type: Gene
SIO_000068: ncbigene

position:368330:-1
position: 368330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:369202:-1
position: 369202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:368330-369202:-1:exon

HDEF_RS01850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: rsmI
locus tag: HDEF_RS01850
old locus tag: HDEF_0361
EC number: 2.1.1.198
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012738079.1
GO function: GO:0008649 - rRNA methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO process: GO:0000451 - rRNA 2'-O-methylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase
translation: MHQYNEQIVFASTFYVIATPIGNLGDITHRALSVLNHVDLIAAEDTRHTGLLLKHFNIKATRLFALHDNNEHQKTGVLLEKLKNGQSIALVSDAGTPLISDPGYHLVRSCREEGIRVVPLPGACAAIAALSASGIASDRFCYEGFLPSKAPSRQNALKALIEEKRTLIFYESPHRILDSLQDMASIFGEERYVVLARELTKTWESIYGAPVQQLLNWIKEDKNRHRGEMVLIMEGHRIKSDNSLPHAALETFRLLHSELSIKKSAALTSKIHHVKKNALYRYALDNNWQD
SIO_010081: HDEF_RS01850
subclass of: SO_0000673
so part of: HDEF_RS01850
location: complement(368330..369202)
location: region:368330-369202:-1
so has part: feature:368330-369202:-1:exon

WP_012738079.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:368330-369202:-1:exon

HDEF_RS01855
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: envC
locus tag: HDEF_RS01855
old locus tag: HDEF_0363
so part of: sequence
location: 369416..370663
location: region:369416-370663:1
so has part: feature:369416-370663:1:exon
subclass of: SO_0000010

66260274
type: Gene
SIO_000068: ncbigene

position:369416:1
position: 369416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:370663:1
position: 370663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:369416-370663:1:exon

HDEF_RS01855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: envC
locus tag: HDEF_RS01855
old locus tag: HDEF_0363
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857467.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: murein hydrolase activator EnvC
translation: MFYRAYFKSKPMIKVLCPFFLLGISLLASSFLGASDLLLYKKNSDKKVQLETLQQEIEKKEKTVQEKQKKRHQLLSQLKKQEKEIEKLKRTLALSKNAINKINEEITEFSESIDALKNSLKAQQLMLAQQLDFAFKQGKTHGVQFLLKGEESHLSRRVLAYIDYLNQARVNSVNELKNTQINLSEKKSILIKKKNQQNTLLDQQKTQQIKFKKISRAHEKNLSLLESSIEKEKISLDHLKSYETQLINAILKAQREAHIRHEYEEKKGKKYQPNNRERFLVSLTSGIGAPKGKISWPVKGTLLHHFGESLQGELRWKGMVIATNEGEPVKAIADGYVLLADWLQGYGLVVVIEHGKGDMSLYGYNKKILVKLNTQVKAGQTITLAGSSPLEGKPALYFEIRRQGQAVNPRLWLKK
SIO_010081: HDEF_RS01855
subclass of: SO_0000673
so part of: HDEF_RS01855
location: 369416..370663
location: region:369416-370663:1
so has part: feature:369416-370663:1:exon

WP_044612244.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:369416-370663:1:exon

HDEF_RS01860
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS01860
old locus tag: HDEF_0364
so part of: sequence
location: 370768..371220
location: region:370768-371220:1
so has part: feature:370768-371220:1:exon
subclass of: SO_0000010

66260275
type: Gene
SIO_000068: ncbigene

position:370768:1
position: 370768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:371220:1
position: 371220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:370768-371220:1:exon

HDEF_RS01860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS01860
old locus tag: HDEF_0364
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857468.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF441 domain-containing protein
translation: MMFFSSTFFVLLLFAILGLISKNMTLSISVVCLFFLSFIYPNLIFPWVEKYALKAGILILTIAVLAPIASGKINARDIFNSFTHWQSILGILIGVFVSWLGGRGVSLMSHQPSVVTGLLVGTILGVAFFKGVPVGPLIAAGLLSLALGKF
SIO_010081: HDEF_RS01860
subclass of: SO_0000673
so part of: HDEF_RS01860
location: 370768..371220
location: region:370768-371220:1
so has part: feature:370768-371220:1:exon

WP_012738082.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:370768-371220:1:exon

HDEF_RS01865
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS01865
old locus tag: HDEF_0365
pseudo: true
so part of: sequence
location: 371258..373256
location: region:371258-373256:1
so has part: feature:371258-373256:1:exon
subclass of: SO_0000010

66260276
type: Gene
SIO_000068: ncbigene

position:371258:1
position: 371258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:373256:1
position: 373256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:371258-373256:1:exon

HDEF_RS01865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS01865
old locus tag: HDEF_0365
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857469.1
GO function: GO:0008080 - N-acetyltransferase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: GNAT family N-acetyltransferase
SIO_010081: HDEF_RS01865
subclass of: SO_0000673
so part of: HDEF_RS01865
location: 371258..373256
location: region:371258-373256:1
so has part: feature:371258-373256:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:371258-373256:1:exon

HDEF_RS01870
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: gltX
locus tag: HDEF_RS01870
old locus tag: HDEF_0366
so part of: sequence
location: complement(373416..374819)
location: region:373416-374819:-1
so has part: feature:373416-374819:-1:exon
subclass of: SO_0000010

66260277
type: Gene
SIO_000068: ncbigene

position:373416:-1
position: 373416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:374819:-1
position: 374819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:373416-374819:-1:exon

HDEF_RS01870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: gltX
locus tag: HDEF_RS01870
old locus tag: HDEF_0366
EC number: 6.1.1.17
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857470.1
GO component: GO:0009332 - glutamate-tRNA ligase complex [Evidence IEA]
GO function: GO:0004818 - glutamate-tRNA ligase activity [Evidence IEA]
GO process: GO:0006424 - glutamyl-tRNA aminoacylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glutamate--tRNA ligase
translation: MKIKTRFAPSPTGYLHIGGVRTALYSWLFAHHMGGEFVLRIEDTDLERSTQEAIDAIMDGMNWLNIGWDEGPYFQTKRMDRYNSVIESMLNNGTAYKCYCSKERLEKLRTKQMMEGLKPRYDGRCRHHQNPPSDKTLSVIRFGNPEEGFVIFKDKIRGEIKFSNKELDDLIIRRSDGLPTYNFCVVIDDWEMGITHVIRGEDHINNTPRQINILKALNAPIPEYAHVSMILGENGQKLSKRFNAVGIMEYRDQGYLPQALLNYLVRLGWSYGDQEIFSVDEMKTLFTLEAVSKSAASFNTEKLLWLNHHYINHLPTEEVAVHLAWHIEKAGFNTDQGPELVEIVKLLGERCKTLKEMAESCRYFYEEFEQFDENAAKKHLRAQAYEPLSQVRIKLAALSEWAKEEIQNAIESTAKELGIGMGKIGMPLRVAATGQAQSPALHLTIHAIGQARTLARIEKALTLIASG
SIO_010081: HDEF_RS01870
subclass of: SO_0000673
so part of: HDEF_RS01870
location: complement(373416..374819)
location: region:373416-374819:-1
so has part: feature:373416-374819:-1:exon

WP_012738083.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:373416-374819:-1:exon

HDEF_RS01875
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: fis
locus tag: HDEF_RS01875
old locus tag: HDEF_0367
so part of: sequence
location: complement(374901..375200)
location: region:374901-375200:-1
so has part: feature:374901-375200:-1:exon
subclass of: SO_0000010

66260278
type: Gene
SIO_000068: ncbigene

position:374901:-1
position: 374901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:375200:-1
position: 375200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:374901-375200:-1:exon

HDEF_RS01875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: fis
locus tag: HDEF_RS01875
old locus tag: HDEF_0367
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857471.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA-binding transcriptional regulator Fis
translation: MFEYRENYDVFISNSTNMENHSMKTLLRDSVRQALKNYFFQLNAQNVTKLYSLVLAEVEQPLLEMVMEYTEGNQTLAANMMGINRGTLRKKLKKYAMDQ
SIO_010081: HDEF_RS01875
subclass of: SO_0000673
so part of: HDEF_RS01875
location: complement(374901..375200)
location: region:374901-375200:-1
so has part: feature:374901-375200:-1:exon

WP_012738084.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:374901-375200:-1:exon

HDEF_RS01880
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: rpsT
locus tag: HDEF_RS01880
old locus tag: HDEF_0369
pseudo: true
so part of: sequence
location: 375404..>375664
location: region:375404-375664:1
so has part: feature:375404-375664:1:exon
subclass of: SO_0000010

66260279
type: Gene
SIO_000068: ncbigene

position:375404:1
position: 375404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:375664:1
position: 375664
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:375404-375664:1:exon

HDEF_RS01880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: rpsT
locus tag: HDEF_RS01880
old locus tag: HDEF_0369
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006117633.1
GO component: GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000312 - plastid small ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: 30S ribosomal protein S20
SIO_010081: HDEF_RS01880
subclass of: SO_0000673
so part of: HDEF_RS01880
location: 375404..>375664
location: region:375404-375664:1
so has part: feature:375404-375664:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:375404-375664:1:exon

HDEF_RS01885
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: nhaA
locus tag: HDEF_RS01885
old locus tag: HDEF_0370
so part of: sequence
location: complement(375907..377073)
location: region:375907-377073:-1
so has part: feature:375907-377073:-1:exon
subclass of: SO_0000010

66260280
type: Gene
SIO_000068: ncbigene

position:375907:-1
position: 375907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:377073:-1
position: 377073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:375907-377073:-1:exon

HDEF_RS01885
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: nhaA
locus tag: HDEF_RS01885
old locus tag: HDEF_0370
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857473.1
GO function: GO:0015385 - sodium:proton antiporter activity [Evidence IEA]
GO process: GO:1902600 - proton transmembrane transport [Evidence IEA]; GO:0006814 - sodium ion transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Na+/H+ antiporter NhaA
translation: MKNVIRQFLRLEASGGIILIIAAVIAMGMANGPLRDLYQSFLDIPITFRISTLDISKSLLLWVNDGLMAIFFLLVGLEVKRELIEGSLAGRDKALFPAIAALGGMLAPAIIYLLFNGSDELTRQGWAIPAATDIAFALGVMALLGDRVPNSLKVFLLALAIIDDLGVIIIIALFYAANLSWLAFGIAVVATVFLACMNWRGVDKTSLYLLIGFILWVSILKSGIHATLAGVLIGFMIPLRTKKKHSPLEKLEHGLHPWVAYLILPLFAFANAGVSLSGVSFSGLTSLLPLGIATALIIGKPLGIFIFSWISVKTGIAKLPNSIHFKHIFSVSVLCGIGFTMSIFIASLAFDSSHLELNTYSKLGILLGSTVSAVLGYSLLKVFLPKKH
SIO_010081: HDEF_RS01885
subclass of: SO_0000673
so part of: HDEF_RS01885
location: complement(375907..377073)
location: region:375907-377073:-1
so has part: feature:375907-377073:-1:exon

WP_012738087.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:375907-377073:-1:exon

HDEF_RS01890
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: dnaJ
locus tag: HDEF_RS01890
old locus tag: HDEF_0371
so part of: sequence
location: complement(377152..378267)
location: region:377152-378267:-1
so has part: feature:377152-378267:-1:exon
subclass of: SO_0000010

66260281
type: Gene
SIO_000068: ncbigene

position:377152:-1
position: 377152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:378267:-1
position: 378267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:377152-378267:-1:exon

HDEF_RS01890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: dnaJ
locus tag: HDEF_RS01890
old locus tag: HDEF_0371
EC number: 1.8.4.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012738088.1
GO function: GO:0005515 - protein binding [Evidence IEA]
GO process: GO:0006457 - protein folding [Evidence IEA]; GO:0009408 - response to heat [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: molecular chaperone DnaJ
translation: MSKKDYYEILGIAKNANEQDIKDAYKRLAKKYHPDRNKDKDAETKFKEMKEAYEVLSDQQKRAAYDQHGHTAFEQSGMGGGFHNSSNFSNVFNDVFSDFFGGHQQRTQRGRDLRYTLNLTLEEAVRGASKEIHITTLVHCEHCKGSGAKQGTRPVTCTTCRGVGEVHMQQGFFTIQQTCPRCHGQGQMIKDPCRQCRGQGKVEEPKTFSVKVPAGIDSNDCLRLNGKGEVGEMGAPSGDLYVQIHVDRHHIFERSKNNLYCKVPINFTTAALGGEIEVPTLDGAIKLKIPPETQTGQCFRIPNKGIKPEKKTPGDLFCTVFIETPVHLNEKQKKLLRDLDQSFCETSSKKNTPETKKFLESMKKFFDNLTH
SIO_010081: HDEF_RS01890
subclass of: SO_0000673
so part of: HDEF_RS01890
location: complement(377152..378267)
location: region:377152-378267:-1
so has part: feature:377152-378267:-1:exon

WP_012738088.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:377152-378267:-1:exon

HDEF_RS01895
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: dnaK
locus tag: HDEF_RS01895
old locus tag: HDEF_0372
so part of: sequence
location: complement(378392..380299)
location: region:378392-380299:-1
so has part: feature:378392-380299:-1:exon
subclass of: SO_0000010

66260282
type: Gene
SIO_000068: ncbigene

position:378392:-1
position: 378392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:380299:-1
position: 380299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:378392-380299:-1:exon

HDEF_RS01895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: dnaK
locus tag: HDEF_RS01895
old locus tag: HDEF_0372
inference: COORDINATES: similar to AA sequence:RefSeq:NP_308041.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
GO process: GO:0006457 - protein folding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: molecular chaperone DnaK
translation: MTKIIGIDLGTTNSCVAIMDGSKPRVLENSEGDRTTPSIIAYTDDGETLVGQPAKRQAVTNAKNTFFAIKRLVGRKFSDQETQRDKDIMPFDILESDNGDAWLSVKGQKTAPPQISAEVLKKMKKTAEDYLGETVTEAVVTVPAYFNDAQRQATKDAGRISGLEIKRIINEPTAAAIAYGLDKGKGNSTIAVYDLGGGTFDISIIEIDDVDGEKTFEVLATNGDTHLGGEDFDNRLINYLVDEFKKEQGFDLRKDPLAMQRLKEAAEKAKVELSSAQQTDVNLPYITADATGPKHMNMKVTRAKLESLVEDLVSRSIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVADFFGKEPRKDVNPDEAVAIGAAVQGGVLSGEVKDLLLLDVTPLSLGIETMGGVMTSLISKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAIDNKSLGQFNLDGIQPAPRGTSQIEVTFDIDADGILHVSAKDKNTGREQKITIKASSGLSEAEIEKMVRDAESNSETDRKFEELIQVRNQADHLIHATNKKLKEAGDKVSPEEKTSIEQALKALETAIKGEDKTDIESKANALTMVSAKLEEASQQNSSSNNAEKNDSSDVKADAVDAEFEEVKDKK
SIO_010081: HDEF_RS01895
subclass of: SO_0000673
so part of: HDEF_RS01895
location: complement(378392..380299)
location: region:378392-380299:-1
so has part: feature:378392-380299:-1:exon

WP_012738089.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:378392-380299:-1:exon

HDEF_RS01900
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: ppa
locus tag: HDEF_RS01900
old locus tag: HDEF_0373
so part of: sequence
location: complement(380377..380937)
location: region:380377-380937:-1
so has part: feature:380377-380937:-1:exon
subclass of: SO_0000010

66260283
type: Gene
SIO_000068: ncbigene

position:380377:-1
position: 380377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:380937:-1
position: 380937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:380377-380937:-1:exon

HDEF_RS01900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: ppa
locus tag: HDEF_RS01900
old locus tag: HDEF_0373
EC number: 3.6.1.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001739810.1
GO function: GO:0004427 - inorganic diphosphate phosphatase activity [Evidence IEA]
GO process: GO:0006796 - phosphate-containing compound metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: inorganic diphosphatase
translation: MSLDLVDAGENLPKDIYVVIEIPAHADPIKYEVDKKTGALFVDRFMSTAMFYPCNYGYINQTLSLDGDPVDVLVPTPHPLQPGSVIRCRPVGMLRMTDDAGQDAKVIAVPHSKLTKEYEAVQDIHDVSELLKAQIKHFFEHYKDLEKGKWVKIKGWENAEAAEKEIMDSFRRAKSSSFTDKQPNLK
SIO_010081: HDEF_RS01900
subclass of: SO_0000673
so part of: HDEF_RS01900
location: complement(380377..380937)
location: region:380377-380937:-1
so has part: feature:380377-380937:-1:exon

WP_012738090.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:380377-380937:-1:exon

HDEF_RS01905
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: sthA
locus tag: HDEF_RS01905
old locus tag: HDEF_0374
so part of: sequence
location: complement(381050..382456)
location: region:381050-382456:-1
so has part: feature:381050-382456:-1:exon
subclass of: SO_0000010

66260284
type: Gene
SIO_000068: ncbigene

position:381050:-1
position: 381050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:382456:-1
position: 382456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:381050-382456:-1:exon

HDEF_RS01905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: sthA
locus tag: HDEF_RS01905
old locus tag: HDEF_0374
EC number: 1.6.1.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017800705.1
GO function: GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0003957 - NAD(P)+ transhydrogenase (B-specific) activity [Evidence IEA]
GO process: GO:0045454 - cell redox homeostasis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Si-specific NAD(P)(+) transhydrogenase
translation: MKTHFNFDTVVIGSGPGGEGAAMGLAKKGQSVAVVERYKNVGGGCTHSGTIPSKALRHVISRIIEFNQNPLYSEHLQSIHPSFYHILQHANHVIRKQVSMRFDFYQRNHCHLFFGHARFIDPYKLEVIRPDGTLNTLSADHIVIATGSRPYHPESIDFTHPRIYDSDSILELKEEQQPKHIIIYGAGVIGCEYASIFRGLGVKVDLINTRNHLLAFLDQEISDALSYHFWNNGVVIRHNEEFDLIEGLDQGVVVHLKSGKKVKADCLFYANGRTGNTKELLLENIGLRTDERRFLQVSNLYQTALSHIYAVGDVIGYPSLASAAYDQGRIASQAITQGINSVRLIENIPTGIYTIPEISSVGKTEQELTDLKVPYEVGRAQFKHLARAQIAGMEAGSLKILFHRESKEILGIHCFGERAAEIIHIGQAIMEQKNGGNTIDYFVNTTFNYPTMAEAYRVAALNGLNRLF
SIO_010081: HDEF_RS01905
subclass of: SO_0000673
so part of: HDEF_RS01905
location: complement(381050..382456)
location: region:381050-382456:-1
so has part: feature:381050-382456:-1:exon

WP_012738091.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:381050-382456:-1:exon

HDEF_RS01910
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: fabR
locus tag: HDEF_RS01910
old locus tag: HDEF_0375
so part of: sequence
location: 382641..383255
location: region:382641-383255:1
so has part: feature:382641-383255:1:exon
subclass of: SO_0000010

66260285
type: Gene
SIO_000068: ncbigene

position:382641:1
position: 382641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:383255:1
position: 383255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:382641-383255:1:exon

HDEF_RS01910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: fabR
locus tag: HDEF_RS01910
old locus tag: HDEF_0375
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002209476.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HTH-type transcriptional repressor FabR
translation: MGVRAEQKARTRRSLIETAFNQLSSEHSFSNLSLREISREAGIAPTSFYYHFRDVNELGLTMVDESGLMLRQLMRQARQRIDKGGSVIRTSVSTFMEFIGNNPNAFRLLLRERSGTCAAFRAAVAREIQHFIAELADYLEFESNMSRRFIEAKAEAMVTIVFSAGAELLDLETEQKHKLKKRLILQLRMIAKGADHLYRPEKKS
SIO_010081: HDEF_RS01910
subclass of: SO_0000673
so part of: HDEF_RS01910
location: 382641..383255
location: region:382641-383255:1
so has part: feature:382641-383255:1:exon

WP_012738092.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:382641-383255:1:exon

HDEF_RS01915
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: glnH
locus tag: HDEF_RS01915
old locus tag: HDEF_0376
so part of: sequence
location: 383760..384503
location: region:383760-384503:1
so has part: feature:383760-384503:1:exon
subclass of: SO_0000010

66260286
type: Gene
SIO_000068: ncbigene

position:383760:1
position: 383760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:384503:1
position: 384503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:383760-384503:1:exon

HDEF_RS01915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: glnH
locus tag: HDEF_RS01915
old locus tag: HDEF_0376
EC number: 7.4.2.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012738093.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0015276 - ligand-gated monoatomic ion channel activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glutamine ABC transporter substrate-binding protein GlnH
translation: MKSLIKIILITFAFLFTLNVSSAEKSLIVAIDTAFVPFEFKQGDKYVGFDIDIWDAIAKELKLNYTLKPMDFSGIVPALQTKNVDLALAGITITEQRKKAIDFSDGYYKSGLLVMVKSNNDKIKNAEDLKDKIVAVKSGTGSVDYAKANIKTKDLRQFPNIDNAYLELGTGRADAVLHDAPNILFFIKTAGDKKFKAVGEMLESLQYGIAFPKGSVLREEVNLALNTLHKNGTYLAIYKKWFNTEPN
SIO_010081: HDEF_RS01915
subclass of: SO_0000673
so part of: HDEF_RS01915
location: 383760..384503
location: region:383760-384503:1
so has part: feature:383760-384503:1:exon

WP_012738093.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:383760-384503:1:exon

HDEF_RS01920
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: glnP
locus tag: HDEF_RS01920
old locus tag: HDEF_0377
so part of: sequence
location: 384538..385194
location: region:384538-385194:1
so has part: feature:384538-385194:1:exon
subclass of: SO_0000010

66260287
type: Gene
SIO_000068: ncbigene

position:384538:1
position: 384538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:385194:1
position: 385194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:384538-385194:1:exon

HDEF_RS01920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: glnP
locus tag: HDEF_RS01920
old locus tag: HDEF_0377
EC number: 7.4.2.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015367581.1
GO component: GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glutamine ABC transporter permease GlnP
translation: MQFEWSVIWPAMPILLQGAKLTLWISILGLLGGLIIGVIAGFTRAYGGKISSNVALIFIELIRGTPIVVQVMFIYFALPMMVPIRIDPFTAAVVTIMINSGAYIAEITRGAVLSIHKGFREAGLALGLSRRDTLRYVVAPLALRRMLPPLGNQWIVSIKDTSLFIVIGVAELTRQGQEIIAGNFRAMEIWSAVAVMYLIITLTLGFVLRRLERKLKII
SIO_010081: HDEF_RS01920
subclass of: SO_0000673
so part of: HDEF_RS01920
location: 384538..385194
location: region:384538-385194:1
so has part: feature:384538-385194:1:exon

WP_012738094.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:384538-385194:1:exon

HDEF_RS01925
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: glnQ
locus tag: HDEF_RS01925
old locus tag: HDEF_0378
so part of: sequence
location: 385191..385916
location: region:385191-385916:1
so has part: feature:385191-385916:1:exon
subclass of: SO_0000010

66260288
type: Gene
SIO_000068: ncbigene

position:385191:1
position: 385191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:385916:1
position: 385916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:385191-385916:1:exon

HDEF_RS01925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: glnQ
locus tag: HDEF_RS01925
old locus tag: HDEF_0378
EC number: 7.4.2.1
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012738095.1
GO function: GO:0015424 - ABC-type amino acid transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO process: GO:0003333 - amino acid transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glutamine ABC transporter ATP-binding protein GlnQ
translation: MINLKNVCKHFGQTEVLHNINLNIKIGEVVVIIGPSGSGKSTLLRCINKLEVITSGQLIVDDLDVNDPKVDERLIRQEAGMVFQQFYLFPHLTALENVAFGPTHIRGATKKEAKELAHELLKKVGLSERSHHYPSELSGGQQQRVAIARALAVKPKLMLFDEPTSALDPQLRHEVLTVMKDLAEEGMTMVIVTHEVNFAHKVASRLIFIDKGRIAQDGNPNTLISNPPSERLREFLQHHVT
SIO_010081: HDEF_RS01925
subclass of: SO_0000673
so part of: HDEF_RS01925
location: 385191..385916
location: region:385191-385916:1
so has part: feature:385191-385916:1:exon

WP_012738095.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:385191-385916:1:exon

HDEF_RS10845
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS10845
old locus tag: HDEF_0381
so part of: sequence
location: 386341..386595
location: region:386341-386595:1
so has part: feature:386341-386595:1:exon
subclass of: SO_0000010

66261889
type: Gene
SIO_000068: ncbigene

position:386341:1
position: 386341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:386595:1
position: 386595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:386341-386595:1:exon

HDEF_RS10845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS10845
old locus tag: HDEF_0381
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSRRLIVFILHGEEESVHGDAGDKGVVPRSEHQHRRVTWHITRRRVLALPRLQQQVDEKHQHHQNIIAKIRAKVEHPFRVLKWL
SIO_010081: HDEF_RS10845
subclass of: SO_0000673
so part of: HDEF_RS10845
location: 386341..386595
location: region:386341-386595:1
so has part: feature:386341-386595:1:exon

WP_100102935.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:386341-386595:1:exon

HDEF_RS01935
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: pckA
locus tag: HDEF_RS01935
old locus tag: HDEF_0382
so part of: sequence
location: 386842..388461
location: region:386842-388461:1
so has part: feature:386842-388461:1:exon
subclass of: SO_0000010

66260289
type: Gene
SIO_000068: ncbigene

position:386842:1
position: 386842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:388461:1
position: 388461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:386842-388461:1:exon

HDEF_RS01935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: pckA
locus tag: HDEF_RS01935
old locus tag: HDEF_0382
EC number: 4.1.1.49
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857033.1
GO function: GO:0004612 - phosphoenolpyruvate carboxykinase (ATP) activity [Evidence IEA]
GO process: GO:0006094 - gluconeogenesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphoenolpyruvate carboxykinase (ATP)
translation: MHNINHLLNTLTDYGIHNTGKIFYNPSYSILFQEETRDTLVGFERGTVTKLGAVAVDTGIFTGRSPKDKYIVRDDITRDTFWWADQGKNKSDNHPITQAIWNELKTCVTQQLSNKPLFVVDAFCGAHSNSRLQVRFITEVAWQAHFVKNMFIRPSEEELTRFHPDFVVMNGAKCTNPNWKEQGLHSKNFVAFNLTERIQLIGGTWYGGEMKKGLFSMMNYFLPLKRIAAMHCSANVGVKGDVAVFFGLSGTGKTTLSADPKRQLIGDDEHGWDDEGVFNFEGGCYAKTIELSESDEPDIYHAIKRDALLENVVVLPDATVDFNDSSKTQNTRVSYPIYHIQNIVQPVSKAGHAKKIIFLTADAFGVLPPVVHLTLEQTQYHFLSGFTSKLAGTELGITSPVPTFSACFGEAFLSLHPTQYAEVLLQRMQAAQAKAYLVNTGWNGMGHRISIKNTRAIIEAILHEKIDHVPTFNLPIFNLSVPTEIEGVNSEILDPRASYSEVKEWQHKAENLARRFIKNFEQYSDTAVGALLLKSGPEL
SIO_010081: HDEF_RS01935
subclass of: SO_0000673
so part of: HDEF_RS01935
location: 386842..388461
location: region:386842-388461:1
so has part: feature:386842-388461:1:exon

WP_012738098.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:386842-388461:1:exon

HDEF_RS11265
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: rpmE
locus tag: HDEF_RS11265
old locus tag: HDEF_0384
so part of: sequence
location: complement(388746..388967)
location: region:388746-388967:-1
so has part: feature:388746-388967:-1:exon
subclass of: SO_0000010

66261929
type: Gene
SIO_000068: ncbigene

position:388746:-1
position: 388746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:388967:-1
position: 388967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:388746-388967:-1:exon

HDEF_RS11265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: rpmE
locus tag: HDEF_RS11265
old locus tag: HDEF_0384
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857032.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L31
translation: MKKNIHPDYKLVIASCSCGNVIEVNSTLGCNINLDVCSNCHPAYTNKKREAATGGRVDRFKKRFSFLESSKAE
SIO_010081: HDEF_RS11265
subclass of: SO_0000673
so part of: HDEF_RS11265
location: complement(388746..388967)
location: region:388746-388967:-1
so has part: feature:388746-388967:-1:exon

WP_012738100.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:388746-388967:-1:exon

HDEF_RS01945
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: sirB1
locus tag: HDEF_RS01945
old locus tag: HDEF_0385
so part of: sequence
location: 389467..390276
location: region:389467-390276:1
so has part: feature:389467-390276:1:exon
subclass of: SO_0000010

66260290
type: Gene
SIO_000068: ncbigene

position:389467:1
position: 389467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:390276:1
position: 390276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:389467-390276:1:exon

HDEF_RS01945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: sirB1
locus tag: HDEF_RS01945
old locus tag: HDEF_0385
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016256500.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: invasion regulator SirB1
translation: MRTISNFKFNTATLSEGVFKITRKIRQDFSIARVRKKLTNLVDDARVAIPEHLNQDQKLELLIDLFYHKWKFEAADGIYRTSDVIWLDNVLKIRQGTATSLGVIFLHIAHQLDIPLMPVLFPIQLIFRADWLDEEMWLINPINGDTLNKHILELWVKAHFNQNITLEDSDLCESDNTSLIRQMLDELKSALIEEKQMELALRTSDMSLFFDPKDPYEIRDRGLIYAELGCTQVAISDLNYFIEQCPEDPISEVIKIQLNAIEKQPFILH
SIO_010081: HDEF_RS01945
subclass of: SO_0000673
so part of: HDEF_RS01945
location: 389467..390276
location: region:389467-390276:1
so has part: feature:389467-390276:1:exon

WP_012738101.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:389467-390276:1:exon

HDEF_RS01950
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: kdsA
locus tag: HDEF_RS01950
old locus tag: HDEF_0386
so part of: sequence
location: 390285..391118
location: region:390285-391118:1
so has part: feature:390285-391118:1:exon
subclass of: SO_0000010

66260291
type: Gene
SIO_000068: ncbigene

position:390285:1
position: 390285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:391118:1
position: 391118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:390285-391118:1:exon

HDEF_RS01950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: kdsA
locus tag: HDEF_RS01950
old locus tag: HDEF_0386
EC number: 2.5.1.55
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012738102.1
GO function: GO:0008676 - 3-deoxy-8-phosphooctulonate synthase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 3-deoxy-8-phosphooctulonate synthase
translation: MNNKVIHFQHINIANHLPFVLFGGMNVLESRDLAMRICEHYVRITNQLNIPYVFKASFDKANRSAVHSYRGPGLEEGMKIFEELKHSFGVAIITDVHEVSQAKIVSEVVDVIQLPAFLARQTDLVVAMAETKAVINVKKPQFMSPMQVGHIVEKFKQAGNEKIILCERGNIFGYDNLVVDMLGITLMAKSTGGHPVILDVTHALQCRDPFGSVSGGRRAQVSELARAGMAVGLAGLFLEAHPDPQNAKCDGPCALPLHKLLPFLTQMKAIDDLIKNF
SIO_010081: HDEF_RS01950
subclass of: SO_0000673
so part of: HDEF_RS01950
location: 390285..391118
location: region:390285-391118:1
so has part: feature:390285-391118:1:exon

WP_012738102.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:390285-391118:1:exon

HDEF_RS01955
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: metN
locus tag: HDEF_RS01955
old locus tag: HDEF_0387
so part of: sequence
location: 391397..392431
location: region:391397-392431:1
so has part: feature:391397-392431:1:exon
subclass of: SO_0000010

66260292
type: Gene
SIO_000068: ncbigene

position:391397:1
position: 391397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:392431:1
position: 392431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:391397-392431:1:exon

HDEF_RS01955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: metN
locus tag: HDEF_RS01955
old locus tag: HDEF_0387
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002212161.1
GO component: GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO function: GO:0033232 - ABC-type D-methionine transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO process: GO:0048473 - D-methionine transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methionine ABC transporter ATP-binding protein MetN
translation: MIRFSHVSKIFEQKKQKVSALLDINLDVPAGQIYGVIGASGAGKSTLIRCANLLERPTEGHIFIDGEELTQLPENKLSLARRQIGMIFQHFNLLSSRTVFDNVALPLELACLPKTEIKKTVLELLELVGLTDKKKVYPVHLSGGQKQRVAIARALANGPKVLLCDEATSALDPGTTRSILKLLKDINRRLGLTILLITHEMDVVKYICDQVGVISHGQLIEKDSVSEMFSHPKTLLAQQFIHSTLHIDIPEDYAHRLSQNPTDLAVSPLLKLQFTGQSADAPLISQAIRRFNIDIGILSAQMDYAGGVKFGTMLAELEGEKQDITAAMQFLKDHHVKTEVLGYV
SIO_010081: HDEF_RS01955
subclass of: SO_0000673
so part of: HDEF_RS01955
location: 391397..392431
location: region:391397-392431:1
so has part: feature:391397-392431:1:exon

WP_012738103.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:391397-392431:1:exon

HDEF_RS01960
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS01960
old locus tag: HDEF_0388
so part of: sequence
location: 392424..393077
location: region:392424-393077:1
so has part: feature:392424-393077:1:exon
subclass of: SO_0000010

66260293
type: Gene
SIO_000068: ncbigene

position:392424:1
position: 392424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:393077:1
position: 393077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:392424-393077:1:exon

HDEF_RS01960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS01960
old locus tag: HDEF_0388
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005132073.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methionine ABC transporter permease MetI
translation: MSEAMMVLILNGVWETVMMTFVSGFFGLIFGLPIGILLYLHRPGHMFSYPVLYQSLSALVNIFRAIPFIILLVWIIPFTRFIVGSSIGLEAAIVPLTVCAIPFIARMIENALLEIPFGLIEAARAMGATPLQIIYKVLLPEAFPALVNSVTITLITLVGYSAMGGAVGAGGLGQIGYQYGYIGYNATVMNFVLVLLVFLVCFIQILGNYVMKMVTHK
SIO_010081: HDEF_RS01960
subclass of: SO_0000673
so part of: HDEF_RS01960
location: 392424..393077
location: region:392424-393077:1
so has part: feature:392424-393077:1:exon

WP_012738104.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:392424-393077:1:exon

HDEF_RS01965
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS01965
old locus tag: HDEF_0389
so part of: sequence
location: 393147..393971
location: region:393147-393971:1
so has part: feature:393147-393971:1:exon
subclass of: SO_0000010

66260294
type: Gene
SIO_000068: ncbigene

position:393147:1
position: 393147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:393971:1
position: 393971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:393147-393971:1:exon

HDEF_RS01965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS01965
old locus tag: HDEF_0389
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016534993.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MetQ/NlpA family lipoprotein
translation: MLLKLKSIKIAAILAVLASCFIVAGCDKKDEKDSNHIKVGVISGPEQTLAQVAQKVAKDQYGLDVELITFNDYVLPNEALNKGDIDVNVFQHQPYLDQQIQDRGYELVAIGNTFIYPMAGYSKEITSLNELTLGYQITMPNDPANLGRALLLLQKQGLIKLKPDVGLMPTVLDVIENPKDLTLVQLDAPQLPTSLDDKENVAIINTTYASQIGLSPTKDGLFVEDKSSPYVNLIVTRKDSKDDEKVKNFVKAYQSPLVEKEAEKIFQGGAVKGW
SIO_010081: HDEF_RS01965
subclass of: SO_0000673
so part of: HDEF_RS01965
location: 393147..393971
location: region:393147-393971:1
so has part: feature:393147-393971:1:exon

WP_012738105.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:393147-393971:1:exon

HDEF_RS01970
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS01970
old locus tag: HDEF_0391
so part of: sequence
location: 394110..395849
location: region:394110-395849:1
so has part: feature:394110-395849:1:exon
subclass of: SO_0000010

66260295
type: Gene
SIO_000068: ncbigene

position:394110:1
position: 394110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:395849:1
position: 395849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:394110-395849:1:exon

HDEF_RS01970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS01970
old locus tag: HDEF_0391
EC number: 6.1.1.15
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012738107.1
GO function: GO:0002161 - aminoacyl-tRNA editing activity [Evidence IEA]; GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004827 - proline-tRNA ligase activity [Evidence IEA]
GO process: GO:0006433 - prolyl-tRNA aminoacylation [Evidence IEA]; GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: proline--tRNA ligase
translation: MRTTQYLLSTLKELPADAEIISHQLMLRAGMIRKLASGLYTWLPTGTRVLKKIENIVREEMNKAGAIEVVMPIVQPADLWQESERWEHYGPELLRFADRSERPFVLGPTHEEVITDLVRNEISSYKQLPLNFFQIQTKFRDEIRPRFGIMRAREFLMKDAYSFHNTLESLQETYQTMYQAYTKIFERMQLNFRAVQADTGSIGGSRSHEFQVLADSGEDEIVFSTVSDFAANIELAEALVPHEKRASPCETLRIIDTPNAKTIDQLVEQFSIPIEKTLKTLIVYAHKDSGHKLLALLVRGDHLINKVKAEKSPQVAKPLTFASEEDIRAHIGAGPGSLGPLHLKMPIIADRAVAVMSDFSAGSNKEDQHYFGINWERDLPLPIIEDLRNVVEGDPSPDGKGTLLIKRGIEVGHIFQLGTKYSQAMGAKVQGENGRQQMMIMGCYGIGVSRLVAAAIEQHHDQHGILWPEAIAPFQVAILPIHLKKSDAVRQEAERLYAELSSLGMDVIFDDRQERPGVMFADMELIGIPHTLIIGDRDLENNELEYRYRGIDDHKKQQLKISDVVSFLLEKINSHFNPK
SIO_010081: HDEF_RS01970
subclass of: SO_0000673
so part of: HDEF_RS01970
location: 394110..395849
location: region:394110-395849:1
so has part: feature:394110-395849:1:exon

WP_012738107.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:394110-395849:1:exon

HDEF_RS01975
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS01975
old locus tag: HDEF_0392
so part of: sequence
location: 395858..396898
location: region:395858-396898:1
so has part: feature:395858-396898:1:exon
subclass of: SO_0000010

66260296
type: Gene
SIO_000068: ncbigene

position:395858:1
position: 395858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:396898:1
position: 396898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:395858-396898:1:exon

HDEF_RS01975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS01975
old locus tag: HDEF_0392
EC number: 2.4.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005186203.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyltransferase
translation: MNSIDLSVIIPVFNAENDLMELFESLKNQKNLFYEVIAINDGSTDQSQIILEKIAQIDKRWVLISQPHRGVSVARNQGIARARGRWIAFTDSDDWLAPQAFETWVQQAEKGDLDCLVGNGFRFKLNPQKPTETLLYRQPWGKILTGREWIIQSVHKNEWPHYVFLQLVKRAFLIKNQLRFIPNMLHEDILWTTELAEVAQRMGFCAEPLYGYRINPESITQSTSIERLAHRAISYLNIIEKLLNKAEAVKQDKAFHQALLKQAHRETRHFLGLMRKKLPPSQLRTQLAKKFTSLGLRTAVFKGICHPDEFWHALRINFLWHIMRSGIAAFLDKHQANSVLFTRPDA
SIO_010081: HDEF_RS01975
subclass of: SO_0000673
so part of: HDEF_RS01975
location: 395858..396898
location: region:395858-396898:1
so has part: feature:395858-396898:1:exon

WP_012738108.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:395858-396898:1:exon

HDEF_RS01980
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: relA
locus tag: HDEF_RS01980
old locus tag: HDEF_0393
so part of: sequence
location: complement(396914..399133)
location: region:396914-399133:-1
so has part: feature:396914-399133:-1:exon
subclass of: SO_0000010

66260297
type: Gene
SIO_000068: ncbigene

position:396914:-1
position: 396914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:399133:-1
position: 399133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:396914-399133:-1:exon

HDEF_RS01980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: relA
locus tag: HDEF_RS01980
old locus tag: HDEF_0393
EC number: 2.7.6.5
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012738109.1
GO process: GO:0015969 - guanosine tetraphosphate metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GTP diphosphokinase
translation: MVSVRNTGLNITDEFAFNQWMKDLGLTLASSLVCLKKTWYYCLQKIPLHSDASGLMEYGIEMVEILSTLNMDDDSLQAAFLFPFVEAEIMNEIELSTYFGDAITVLIRGVREMDAIRYLKTPQDNSVKSAQIDNVRKMLLAMVEDFRCVVIKLAERVAHLGKMKEAPEDERVLAAKACSNIYAPLANRLGIGQLKWELEDFCFRYLHPQQYQKIAQLLHERRVDRKQFIDDCVRFLKKAMKDEGIKAEIYGRPKHIYSIWRKMQRKFLEFDALFDVRAVRVVVERIQDCYASLGVVHTHFRHLPDEFDDYVANPKPNGYQSIHTVVLGPKGKTLEIQIRTQQMHEDSELGVAAHWKYKEGATHSVRSGYENRIIWLRKLIAWQEEISHSGEMLDEVRSQVFDDRVYVFTPKGDVMDLPTGSTPLDFAYHIHSDVGHRCIGAKIGGRIVPFTYQLQMGDQVEVITQKQPNPSRDWLNPHLGYIHSSRSRSKIHNWFRQQAKDKNRLAGRQMLENELGHLNISLKKAEKPLLLRYNLNSIEEIFTGIGAGDIRINQMIHFLQGHFNQLTAEEADQKALKNLTKQNTLSTRHKKNGRIMVEGVGHLMHHIARCCQPILGDEIMGFITRGRGISIHKLDCAQLVDLRLHSSERIVEAVWDESYSSGYSLMLKVLAQDRSALLRDITVILANQKVNVLAIKSRSDTKKQQATIEMNIEIYNLQTLARILAKLNQLPDVIHAARL
SIO_010081: HDEF_RS01980
subclass of: SO_0000673
so part of: HDEF_RS01980
location: complement(396914..399133)
location: region:396914-399133:-1
so has part: feature:396914-399133:-1:exon

WP_012738109.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:396914-399133:-1:exon

HDEF_RS01985
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: tadA
locus tag: HDEF_RS01985
old locus tag: HDEF_0396
so part of: sequence
location: complement(399375..399881)
location: region:399375-399881:-1
so has part: feature:399375-399881:-1:exon
subclass of: SO_0000010

66260298
type: Gene
SIO_000068: ncbigene

position:399375:-1
position: 399375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:399881:-1
position: 399881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:399375-399881:-1:exon

HDEF_RS01985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: tadA
locus tag: HDEF_RS01985
old locus tag: HDEF_0396
EC number: 3.5.4.33
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857025.1
GO function: GO:0008251 - tRNA-specific adenosine deaminase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO process: GO:0002100 - tRNA wobble adenosine to inosine editing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA adenosine(34) deaminase TadA
translation: MNIKTLPAPDSELDHHYWMRHALSLAEQAQASGEVPIGAVVVVNNQSIGEGWNQSVMCHDPTAHAEIIALRQAGRHQKNYRLVNATLYVTLEPCMMCVGAIMHSRIRGLVYGAPDPKKGGVAFLTRMMNIQVKRIDIKTDVLSQTCSRMLVDFFQQRRREQKAQVLKK
SIO_010081: HDEF_RS01985
subclass of: SO_0000673
so part of: HDEF_RS01985
location: complement(399375..399881)
location: region:399375-399881:-1
so has part: feature:399375-399881:-1:exon

WP_012738112.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:399375-399881:-1:exon

HDEF_RS01990
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS01990
old locus tag: HDEF_0397
so part of: sequence
location: complement(399970..400551)
location: region:399970-400551:-1
so has part: feature:399970-400551:-1:exon
subclass of: SO_0000010

66260299
type: Gene
SIO_000068: ncbigene

position:399970:-1
position: 399970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:400551:-1
position: 400551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:399970-400551:-1:exon

HDEF_RS01990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS01990
old locus tag: HDEF_0397
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857024.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSTQLYYYDDPEEGLHRDTSHPRFVSLASEDFYYDACDDSSPFGNDLGADTLSYLEDWYKDKTFKDESISEYLSNILESWDLGPDDLVRKDPQFWKKWGKEKDEKYGGTSYLVSHCNIIIACGLGQLKITGAMDPEIIDRALASIKCLWFLYKGDSTENEDEDLIRLQKMKNLLDSVSKGEINDFMKCHEKTG
SIO_010081: HDEF_RS01990
subclass of: SO_0000673
so part of: HDEF_RS01990
location: complement(399970..400551)
location: region:399970-400551:-1
so has part: feature:399970-400551:-1:exon

WP_012738113.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:399970-400551:-1:exon

HDEF_RS12930
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS12930
old locus tag: HDEF_0398
so part of: sequence
location: 400835..402112
location: region:400835-402112:1
so has part: feature:400835-402112:1:exon
subclass of: SO_0000010

70691992
type: Gene
SIO_000068: ncbigene

position:400835:1
position: 400835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:402112:1
position: 402112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:400835-402112:1:exon

HDEF_RS12930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS12930
old locus tag: HDEF_0398
inference: COORDINATES: protein motif:HMM:NF012330.2
GO process: GO:0006470 - protein dephosphorylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: protein-tyrosine phosphatase family protein
translation: MHRVNHLSTHPSYENTASTQSTGSSLPRELSSVKNINHSKSMHYISRLQNLLDFCSKENDKKRILREREGKFRAALLTKDTPTDTEKKANESVLNFVKGYQVDYNCLKSNMSKEDIKNLVFQKTDDNKVLIIDTKSQKISCGAASVLLELTNTAALNMPNTSISPLQAQPNTLSEVDKLWELLSDFKSKIEQLGEEQPDIFVNKSVNRFVNVNSMSSTNVAPNLSANRVKIGEDEVAILTQYPKDNQIEDQLRMYLKEKIDHVTVLSSNKDIECRGLKKYFSPDCRTEEAVSVTSELTGKNELKDGTTCDHYSLNIRHENNTHAVKLLHVTNWPDHGVISSEDTIMLANEVEKHNKRVIHCTAGVGRTGVLAATVSMMKQQKNHISLQDVIIGLRKQRAANTVQTKDQLKLLAEIAHILNISILH
SIO_010081: HDEF_RS12930
subclass of: SO_0000673
so part of: HDEF_RS12930
location: 400835..402112
location: region:400835-402112:1
so has part: feature:400835-402112:1:exon

WP_012738114.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:400835-402112:1:exon

HDEF_RS10850
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS10850
so part of: sequence
location: complement(402450..402665)
location: region:402450-402665:-1
so has part: feature:402450-402665:-1:exon
subclass of: SO_0000010

66261890
type: Gene
SIO_000068: ncbigene

position:402450:-1
position: 402450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:402665:-1
position: 402665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:402450-402665:-1:exon

HDEF_RS10850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS10850
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: DUF1311 domain-containing protein
translation: MLKKTLILLSLATIFPSMAERSGTLITQVDMTQDSAKEYQSAKKTLNETYQKVSKAVKGEQKTLLKKSQDA
SIO_010081: HDEF_RS10850
subclass of: SO_0000673
so part of: HDEF_RS10850
location: complement(402450..402665)
location: region:402450-402665:-1
so has part: feature:402450-402665:-1:exon

WP_048901546.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:402450-402665:-1:exon

HDEF_RS02005
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS02005
old locus tag: HDEF_0400
so part of: sequence
location: 402996..404618
location: region:402996-404618:1
so has part: feature:402996-404618:1:exon
subclass of: SO_0000010

66260300
type: Gene
SIO_000068: ncbigene

position:402996:1
position: 402996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:404618:1
position: 404618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:402996-404618:1:exon

HDEF_RS02005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS02005
old locus tag: HDEF_0400
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857021.1
GO component: GO:0005615 - extracellular space [Evidence IEA]
GO function: GO:0005509 - calcium ion binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: M10 family metallopeptidase C-terminal domain-containing protein
translation: MITRARKLTHKQIKSKNLNKILENEIKNTLTATYNWNGEKKYGQSVFLNFSFDIKKNPSKGSDKKVFGKPILFTQNQIQKVKLILQFYSDVANVHFNEHKEEDINKKIHLIFFNYIKITPKSRFKRGAAYLPSRDGTSPIWINAELEDNLNPNSKNLGNFTLNHEIGHALGLRHSHISKSYTNKISVMSYYKEFQYNGYYPSGPQMYDIASVQYLYGANLETRIGNTIYGFNSNSGRPYLSAENADDPLIFCVWDAGGIDTFDFSGYRQNQRINLKSSQFSDVGGLKNNVSIAYRVIIENAISGSGDDEIIGNEVDNVLRGGKGADLIYGEQGCDRLFGEEGNDRLYGGEGADKLVGGRGSDQLWGGKDNDYLLGGEDQDFLFGGQGNDPLVGGRGRDQLWGEKGDDTLLGEMGDDWLSGGIGSDKLTGGPGRDIFVYQTCDDSSTLSTDTICDFEVGIDKIDLSRITNNIKNIQFVDRFHFKGQTEIQQRHNSILNITYLMIDFSDSIEKNSLNNNDMMIKFTGNKKLTANDFIFSRFI
SIO_010081: HDEF_RS02005
subclass of: SO_0000673
so part of: HDEF_RS02005
location: 402996..404618
location: region:402996-404618:1
so has part: feature:402996-404618:1:exon

WP_012738115.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:402996-404618:1:exon

HDEF_RS02010
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: proY
locus tag: HDEF_RS02010
old locus tag: HDEF_0401
so part of: sequence
location: complement(404685..406049)
location: region:404685-406049:-1
so has part: feature:404685-406049:-1:exon
subclass of: SO_0000010

66260301
type: Gene
SIO_000068: ncbigene

position:404685:-1
position: 404685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:406049:-1
position: 406049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:404685-406049:-1:exon

HDEF_RS02010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: proY
locus tag: HDEF_RS02010
old locus tag: HDEF_0401
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012738116.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0006865 - amino acid transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: proline-specific permease ProY
translation: MAKNTLKRSLNARHIRFMALGSAIGTGLFYGSADAIKMAGPSVLLAYMMGGLAAFVIMRALGEMAVNNPKSSSFSLYAEQYLGPMAGYVIGWTYCFEILIVAIADVTAFGVYMGVWFPEVPHWIWVLSIVLIIGSINLMSVHVFGELEFWFSFFKVATIILMILVGVGVIVWGIGNGGKPTGIQNLWVNGGFFSHGILGMILSLQVVMFAYGGIEIIGITAGEAKDPKKSIPKAINSVPLRILVFYVGTLFVIMSIFPWNQIGTQGSPFVLTFQHIGITVAAGILNFVVITASVSAINSDVFGVGRMLNGMAEQGHSPKMLNKISQRGAPWVSVLFMMMAMLIAVYLNYIMPDKVFLVIASLATFATVFVWIMILFSQISFRCSLTKEEKKKLEFPLLGGVITSAIGIVFLVFIMVLIGCFPSTRISLFMGCVWLILLILSYYLKIFYQKKSKI
SIO_010081: HDEF_RS02010
subclass of: SO_0000673
so part of: HDEF_RS02010
location: complement(404685..406049)
location: region:404685-406049:-1
so has part: feature:404685-406049:-1:exon

WP_012738116.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:404685-406049:-1:exon

HDEF_RS02015
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: folE
locus tag: HDEF_RS02015
old locus tag: HDEF_0402
so part of: sequence
location: complement(406056..406718)
location: region:406056-406718:-1
so has part: feature:406056-406718:-1:exon
subclass of: SO_0000010

66260302
type: Gene
SIO_000068: ncbigene

position:406056:-1
position: 406056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:406718:-1
position: 406718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:406056-406718:-1:exon

HDEF_RS02015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: folE
locus tag: HDEF_RS02015
old locus tag: HDEF_0402
EC number: 3.5.4.16
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012738117.1
GO function: GO:0003934 - GTP cyclohydrolase I activity [Evidence IEA]
GO process: GO:0046654 - tetrahydrofolate biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GTP cyclohydrolase I FolE
translation: MSSFSKEARQVHEALVKHGLENPFNMDPENGLLDAATRRSHIEKHITQIMELLNLDLRDDSLSKTPSRIASMYVDEIFLGLDYAHFPEITLIQNKMQVDEMITVHDISLSSTCEHHFASIDGKATVAYIPKDYIIGLSKINRVVQFFSQRPQVQERLTQQIILALQTLLATENVAVSIDATHYCVKARGICDRSSVTRTTSLRGLFKSSQNTRQEFLHIC
SIO_010081: HDEF_RS02015
subclass of: SO_0000673
so part of: HDEF_RS02015
location: complement(406056..406718)
location: region:406056-406718:-1
so has part: feature:406056-406718:-1:exon

WP_012738117.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:406056-406718:-1:exon

HDEF_RS02020
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS02020
old locus tag: HDEF_0403
so part of: sequence
location: complement(406799..408391)
location: region:406799-408391:-1
so has part: feature:406799-408391:-1:exon
subclass of: SO_0000010

66260303
type: Gene
SIO_000068: ncbigene

position:406799:-1
position: 406799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:408391:-1
position: 408391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:406799-408391:-1:exon

HDEF_RS02020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS02020
old locus tag: HDEF_0403
inference: COORDINATES: similar to AA sequence:RefSeq:NP_308924.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC-F family ATPase
translation: MLNTHNITMQFGSQPLFENISVKFGKGNRYGLIGANGCGKSTFMKILGKDLTATNGQVSLDVNERIGKLRQDQFAFEKYSVLDTVVMGHNELWKLKEERDRIYALPEMTEEDGYRVADLEVAYGEMDGYSAESRAGELLLGVGIPTEKHNGPMSDIAPGWKLRVLLAQALFSDPDILLLDEPTNNLDIDTIRWLEQTLNQRSSTMIIISHDRHFLNMVCTHMADLDYGELRIYPGNYDQYMYAATQAREHLLAENAKKKAQISELQSFVNRFSANASKSKQATSRARQIEKIQFDEVKATSRQNPFIRFEQEKKLFRNALEVNKLAKGFDSTLFKGLNLMIEVGEKVAVLGANGIGKTTLLKTLIGELPPDEGHVKWSENSNIGYYAQDHAHDFEIEMTVLDWMTQWKQEKDDEQAVRSILGRLLFNQDDIKKSVKVLSGGEKGRMLFGKLMMQCPNILIMDEPTNHLDMESIESLNLALEKYEGTLIFVSHDREFVNSLATRIIEIMPDKVKNFRGNYEEYLLSQGIQP
SIO_010081: HDEF_RS02020
subclass of: SO_0000673
so part of: HDEF_RS02020
location: complement(406799..408391)
location: region:406799-408391:-1
so has part: feature:406799-408391:-1:exon

WP_012738118.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:406799-408391:-1:exon

HDEF_RS11275
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS11275
pseudo: true
so part of: sequence
location: <408506..>408580
location: region:408506-408580:1
so has part: feature:408506-408580:1:exon
subclass of: SO_0000010

66261931
type: Gene
SIO_000068: ncbigene

position:408506:1
position: 408506
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:408580:1
position: 408580
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:408506-408580:1:exon

HDEF_RS11275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS11275
inference: COORDINATES: similar to AA sequence:RefSeq:WP_032489531.1
note: incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: HDEF_RS11275
subclass of: SO_0000673
so part of: HDEF_RS11275
location: <408506..>408580
location: region:408506-408580:1
so has part: feature:408506-408580:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:408506-408580:1:exon

HDEF_RS02025
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS02025
old locus tag: HDEF_0404
so part of: sequence
location: complement(408733..409290)
location: region:408733-409290:-1
so has part: feature:408733-409290:-1:exon
subclass of: SO_0000010

66260304
type: Gene
SIO_000068: ncbigene

position:408733:-1
position: 408733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:409290:-1
position: 409290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:408733-409290:-1:exon

HDEF_RS02025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS02025
old locus tag: HDEF_0404
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKLQNDIYSITNKTSNETVIKIPMDVIPMHVKHDLYTRNVKGLYYKQNPEGKYSLGVHHSTGLEVAKVKAIPANLHDTILAGMLTEKNLANDFFLFSRDHHGNIIGSLSDSPSDANFIGISKMLLIYEDLLLSHNNTAVMDKFDIDSFMENLQKTVKFKVNIIFNNADSILFILKKIKMIIEGEH
SIO_010081: HDEF_RS02025
subclass of: SO_0000673
so part of: HDEF_RS02025
location: complement(408733..409290)
location: region:408733-409290:-1
so has part: feature:408733-409290:-1:exon

WP_012738119.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:408733-409290:-1:exon

HDEF_RS02030
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS02030
old locus tag: HDEF_0405
so part of: sequence
location: complement(409333..411651)
location: region:409333-411651:-1
so has part: feature:409333-411651:-1:exon
subclass of: SO_0000010

66260305
type: Gene
SIO_000068: ncbigene

position:409333:-1
position: 409333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:411651:-1
position: 411651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:409333-411651:-1:exon

HDEF_RS02030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS02030
old locus tag: HDEF_0405
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSDNIYKMINYEYIEEYAKSNLLIENGDIDARLIKLINNHKKKIQNILEGYIDKEFFNNFLHKILIAAYQNAHFRPHDILKEDFFLKLTCDALFISLDYYDEVIENNDKDIKSFNFINRIFYFCSVISMAVKEALKIDLKSFKSTWDNDFLHYQYSNEFNQLVTQVINNDNIKDINFNDFKNKILTKLKSVCYRTFTQVDFSEKEKKALKGLLKIAYNLHYDFSESRHKFINHSALTGFDQHVINIINHFLQEKGIEYSNLTNNFLIISQIQDEYVNENFYYQFITDKDYYNKNLSEVTTNIGIALIFYIYDVIIDELAFLYRTDRQGYFKISFKISERLTKFEDSFDFSYFYNLQIYKKGKENQKNLLKQILYKFAIPAVGIVFNTFFAKFIGFITQRSNSVTDEIRMNASIIMGIVSSLDSFIMSYLFNFLLKDEDSFYLYSADGSVIAFGIGSLTPIPQRTTITRTISMNSINENGLSDPSLFQNTRADTILGRFPDPVPIPGHVHDGFKRRKRSTEINDHVVDNEHIYIRYLDFIKKKSDKENYESNPLLKKWIEQNQYRVMKHKPLTEKYDYDYKKVLDSLNFIQDELLNFRNIDLANEYLKDRSYSVQDDFTININRNDFNEKYFFLQVFNINVDYFDKNDMDRIDERIFIISKIMCDEEFYSQSKNLNLNFVFYDFMQYSNMFVDQKNLHISRRILLTILLIYLYKQGDDILKTIKNIEEKILENELAQLKPKAPVSEINRKFNAIISIHKKTIQNIISVIKYFT
SIO_010081: HDEF_RS02030
subclass of: SO_0000673
so part of: HDEF_RS02030
location: complement(409333..411651)
location: region:409333-411651:-1
so has part: feature:409333-411651:-1:exon

WP_012738120.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:409333-411651:-1:exon

HDEF_RS12935
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS12935
pseudo: true
so part of: sequence
location: complement(411731..>411817)
location: region:411731-411817:-1
so has part: feature:411731-411817:-1:exon
subclass of: SO_0000010

70691993
type: Gene
SIO_000068: ncbigene

position:411731:-1
position: 411731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:411817:-1
position: 411817
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:411731-411817:-1:exon

HDEF_RS12935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS12935
inference: COORDINATES: protein motif:HMM:NF015218.2
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: HDEF_RS12935
subclass of: SO_0000673
so part of: HDEF_RS12935
location: complement(411731..>411817)
location: region:411731-411817:-1
so has part: feature:411731-411817:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:411731-411817:-1:exon

HDEF_RS12940
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS12940
so part of: sequence
location: complement(411784..411870)
location: region:411784-411870:-1
so has part: feature:411784-411870:-1:exon
subclass of: SO_0000010

70691994
type: Gene
SIO_000068: ncbigene

position:411784:-1
position: 411784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:411870:-1
position: 411870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:411784-411870:-1:exon

HDEF_RS12940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS12940
inference: COORDINATES: protein motif:HMM:NF017860.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MHPPPDLLTPLNGIISLSERLSPSQSSK
SIO_010081: HDEF_RS12940
subclass of: SO_0000673
so part of: HDEF_RS12940
location: complement(411784..411870)
location: region:411784-411870:-1
so has part: feature:411784-411870:-1:exon

WP_232507689.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:411784-411870:-1:exon

HDEF_RS02040
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS02040
old locus tag: HDEF_0408
so part of: sequence
location: complement(412026..412712)
location: region:412026-412712:-1
so has part: feature:412026-412712:-1:exon
subclass of: SO_0000010

66260306
type: Gene
SIO_000068: ncbigene

position:412026:-1
position: 412026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:412712:-1
position: 412712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:412026-412712:-1:exon

HDEF_RS02040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS02040
old locus tag: HDEF_0408
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857708.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Rha family transcriptional regulator
translation: MPLVEIKKFDLVSNSSAIALGVKKEHKPVIQLVRKYQSDLEEFARVKFEMRPFQTKGGAQKKEVALLNEQQTTLLITYMRNNPIVRAFKKRLVAEFFRMRAALENKEKSRNVARLEYKPMTEAIEQAHRAQGQSLAPHHFRSEADLINHIAVGMTAAQFRVYHNISHKESLRDYLTPEQIYCITELQRANTVFLRMGWDFKYRQTRLMQIFEQYHCPSLIKEQRRLLA
SIO_010081: HDEF_RS02040
subclass of: SO_0000673
so part of: HDEF_RS02040
location: complement(412026..412712)
location: region:412026-412712:-1
so has part: feature:412026-412712:-1:exon

WP_012738122.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:412026-412712:-1:exon

HDEF_RS02045
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS02045
old locus tag: HDEF_0409
pseudo: true
so part of: sequence
location: complement(413042..413490)
location: region:413042-413490:-1
so has part: feature:413042-413490:-1:exon
subclass of: SO_0000010

66260307
type: Gene
SIO_000068: ncbigene

position:413042:-1
position: 413042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:413490:-1
position: 413490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:413042-413490:-1:exon

HDEF_RS02045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS02045
old locus tag: HDEF_0409
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019105757.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: lysozyme
SIO_010081: HDEF_RS02045
subclass of: SO_0000673
so part of: HDEF_RS02045
location: complement(413042..413490)
location: region:413042-413490:-1
so has part: feature:413042-413490:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:413042-413490:-1:exon

HDEF_RS02050
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS02050
old locus tag: HDEF_0410
so part of: sequence
location: complement(413492..413830)
location: region:413492-413830:-1
so has part: feature:413492-413830:-1:exon
subclass of: SO_0000010

66260308
type: Gene
SIO_000068: ncbigene

position:413492:-1
position: 413492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:413830:-1
position: 413830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:413492-413830:-1:exon

HDEF_RS02050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS02050
old locus tag: HDEF_0410
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015873424.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phage holin family protein
translation: MSLPEKEPGFWVALLAWIRSQQIDFSYASLAALFSLLRNAWGKYSWSRRLLDAFSCGTLAFFAQPLLSIVDSAFDVSLSASVPGVLAIYIRYVGTDYIWACIQSWTQRKNGE
SIO_010081: HDEF_RS02050
subclass of: SO_0000673
so part of: HDEF_RS02050
location: complement(413492..413830)
location: region:413492-413830:-1
so has part: feature:413492-413830:-1:exon

WP_012738124.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:413492-413830:-1:exon

HDEF_RS02055
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS02055
old locus tag: HDEF_0411
so part of: sequence
location: complement(414463..415686)
location: region:414463-415686:-1
so has part: feature:414463-415686:-1:exon
subclass of: SO_0000010

66260309
type: Gene
SIO_000068: ncbigene

position:414463:-1
position: 414463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:415686:-1
position: 415686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:414463-415686:-1:exon

HDEF_RS02055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS02055
old locus tag: HDEF_0411
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857707.1
GO function: GO:0016787 - hydrolase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: metallophosphoesterase
translation: MKLQTLVSIVLVIFSLLIPQAFSKKIKFLTISDIHLNHQQTHKMEMAPSGYNATNDMDNQTFGQLSSLIRRNVGAQKLISKPEFILYLGDIVGHKRASNPTRFVQDNTKKALAGLQSMFPDTPIINVFGNNDSFEKNYGAFFSDGLSPYKVALQSGFKNGFLSTGIKCHLKGKSDFPCIQSQNDKHGFFTIKLADTLILIGLNSVMFSPKHVAPLEHIQLQMEYLKKQLKHAKKENTSVLIAMHIPVGNNVYDGSGFWNKSYQEQFLKIMHDYYKQIKGILAAHTHMDEFKIIRMPENQNMGEYLTAGLSTAHGNFPSIKVFTMNDSGQKWSISNYSTYQIHQIKSQLHIDKYYDFVGAYCKNRPDVIDINTCLSHITFNDILSRYTVNNPNYPLYKAQSPESFYVN
SIO_010081: HDEF_RS02055
subclass of: SO_0000673
so part of: HDEF_RS02055
location: complement(414463..415686)
location: region:414463-415686:-1
so has part: feature:414463-415686:-1:exon

WP_012738125.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:414463-415686:-1:exon

HDEF_RS02060
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS02060
old locus tag: HDEF_0412
so part of: sequence
location: 415853..416230
location: region:415853-416230:1
so has part: feature:415853-416230:1:exon
subclass of: SO_0000010

66260310
type: Gene
SIO_000068: ncbigene

position:415853:1
position: 415853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:416230:1
position: 416230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:415853-416230:1:exon

HDEF_RS02060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS02060
old locus tag: HDEF_0412
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006704235.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS630 transposase-related protein
translation: MSYSVDFRQKVLSIREKEGLSIRATAKRFHVGTDTLRRWLKRIEPKPSGPRRGKMDKEAFIKDVAEYPDSYQRERAARFGVCPKAIWQALKRWGLTYKKNSASSQGKRRGTTGVPGKNRGVSKAG
SIO_010081: HDEF_RS02060
subclass of: SO_0000673
so part of: HDEF_RS02060
location: 415853..416230
location: region:415853-416230:1
so has part: feature:415853-416230:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:415853-416230:1:exon

HDEF_RS02065
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS02065
old locus tag: HDEF_0413
so part of: sequence
location: 416205..416675
location: region:416205-416675:1
so has part: feature:416205-416675:1:exon
subclass of: SO_0000010

66260311
type: Gene
SIO_000068: ncbigene

position:416205:1
position: 416205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:416675:1
position: 416675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:416205-416675:1:exon

HDEF_RS02065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS02065
old locus tag: HDEF_0413
inference: COORDINATES: protein motif:HMM:NF024751.2
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS630 family transposase
translation: MAGYQKQGKSLVYLDESGFAHDMPRLYGYATRGQRCFGTHDWQAKGRTNVIGALLGVTLIAVGLFNCSINSDVFYAWVTQLLLPALPHPCVMMMDNASFHKRKDIQHAILNAGHSIEYLPPYSPEFNPIEHTWAQAKRKRRELQCDINTLFSEHIM
SIO_010081: HDEF_RS02065
subclass of: SO_0000673
so part of: HDEF_RS02065
location: 416205..416675
location: region:416205-416675:1
so has part: feature:416205-416675:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:416205-416675:1:exon

HDEF_RS02070
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS02070
old locus tag: HDEF_0414
so part of: sequence
location: complement(416695..417393)
location: region:416695-417393:-1
so has part: feature:416695-417393:-1:exon
subclass of: SO_0000010

66260312
type: Gene
SIO_000068: ncbigene

position:416695:-1
position: 416695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:417393:-1
position: 417393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:416695-417393:-1:exon

HDEF_RS02070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS02070
old locus tag: HDEF_0414
inference: COORDINATES: protein motif:HMM:NF014581.2
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretory system conjugative DNA transfer family protein
translation: MRRKEKSLYSPTKPQKRIERFPPILIGKHPTEDDFLASYGQTFVMLAAPPGTGKGVGMVIPNALTYPDSMVINDPKFENWHLTAGFRASCGQEVFRFSPEMLETHRWNPLSRLNRDPLFRLGDIKSMASVLFVPDNPKNASFFSASADIFTALVLYLMETPSLPLTLPQIYEISAQGMVLGEWAKKEMEARSQGDQPLSSECLREMNRMVSSSQSKTGWPITQDILNKRLSL
SIO_010081: HDEF_RS02070
subclass of: SO_0000673
so part of: HDEF_RS02070
location: complement(416695..417393)
location: region:416695-417393:-1
so has part: feature:416695-417393:-1:exon

WP_012738126.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:416695-417393:-1:exon

HDEF_RS02075
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS02075
old locus tag: HDEF_0415
so part of: sequence
location: complement(417390..417734)
location: region:417390-417734:-1
so has part: feature:417390-417734:-1:exon
subclass of: SO_0000010

66260313
type: Gene
SIO_000068: ncbigene

position:417390:-1
position: 417390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:417734:-1
position: 417734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:417390-417734:-1:exon

HDEF_RS02075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS02075
old locus tag: HDEF_0415
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001749308.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MWWKIAMASIFMMMVFFVIGLFVGGGVYLLLIGGSFGQVTLTTLIESGAFSLTDRQKIFLPWAWCVTVALTFLPLGLTLFVLLLGKTPKKSLHGDARFANKKELNAFKYRGNYQ
SIO_010081: HDEF_RS02075
subclass of: SO_0000673
so part of: HDEF_RS02075
location: complement(417390..417734)
location: region:417390-417734:-1
so has part: feature:417390-417734:-1:exon

WP_012738127.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:417390-417734:-1:exon

HDEF_RS02080
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: virB11
locus tag: HDEF_RS02080
old locus tag: HDEF_0416
so part of: sequence
location: complement(417751..418776)
location: region:417751-418776:-1
so has part: feature:417751-418776:-1:exon
subclass of: SO_0000010

66260314
type: Gene
SIO_000068: ncbigene

position:417751:-1
position: 417751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:418776:-1
position: 418776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:417751-418776:-1:exon

HDEF_RS02080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: virB11
locus tag: HDEF_RS02080
old locus tag: HDEF_0416
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001090934.1
GO component: GO:0043684 - type IV secretion system complex [Evidence IEA]
GO process: GO:0044097 - secretion by the type IV secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P-type DNA transfer ATPase VirB11
translation: MADDFNSLLARDFLAQSGVTQRLSRDGVTEVAINRPFEIWTESALGWVQESVPELDYDLCWKLANSLSTYNHRFLSIQSPIKTVELPGGERAQIVIPPACEAGTISMTFRKPSLERFRLEDYLSSGRFDKAKNISCRQKTLESVEVKLKQLHAEQDYVAFFKKAVQHKLNIIIFGGTGSGKTTFAKAVVDLFPPDRRMLTIEELNELKLPYHPNHVHLLYGDTVSSKELVSCCMRMKGDHIFLAELTGDEAWDFMELLNTGHPGTITTAHANDSLSGYARVCGLIKQSPIGQGLDYAYIERRVRTSFDVVMYMEGTHILEVTYEPEVKQALLNGGSFCSSF
SIO_010081: HDEF_RS02080
subclass of: SO_0000673
so part of: HDEF_RS02080
location: complement(417751..418776)
location: region:417751-418776:-1
so has part: feature:417751-418776:-1:exon

WP_012738128.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:417751-418776:-1:exon

HDEF_RS02085
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS02085
old locus tag: HDEF_0417
so part of: sequence
location: complement(418766..419431)
location: region:418766-419431:-1
so has part: feature:418766-419431:-1:exon
subclass of: SO_0000010

66260315
type: Gene
SIO_000068: ncbigene

position:418766:-1
position: 418766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:419431:-1
position: 419431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:418766-419431:-1:exon

HDEF_RS02085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS02085
old locus tag: HDEF_0417
inference: COORDINATES: protein motif:HMM:NF015688.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TrbI/VirB10 family protein
translation: MSIGEGRRGRLSTLSGTGFESSKAYVMPSRQFLVTHNTYTRCALYTRIITDQPGLIECRLTEPLYSSDGSVVIAQAGDKLTGEQKVEVRAGQTRVFTSWTELETASGVRAKLDSLGAGPMGASGTEAWIDHHYRQRFGGAVMLSFIQDALHSAANATQKSNQGYTVNNSEQNVESMANQALENSINIPPTAYILPGTVMTVIVARDIDFSSVFTLREQNGR
SIO_010081: HDEF_RS02085
subclass of: SO_0000673
so part of: HDEF_RS02085
location: complement(418766..419431)
location: region:418766-419431:-1
so has part: feature:418766-419431:-1:exon

WP_012738129.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:418766-419431:-1:exon

HDEF_RS02090
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS02090
old locus tag: HDEF_0418
so part of: sequence
location: complement(419428..420087)
location: region:419428-420087:-1
so has part: feature:419428-420087:-1:exon
subclass of: SO_0000010

66260316
type: Gene
SIO_000068: ncbigene

position:419428:-1
position: 419428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:420087:-1
position: 420087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:419428-420087:-1:exon

HDEF_RS02090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS02090
old locus tag: HDEF_0418
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSVNEDVSTSPEGQTSPNPPPRSEVNAPGGISPRGDFDARVKRKKRGMTLKTLLIAGGVVLTLCIAVMVIFMIAASHMSQNNKIDESRVKADDALQRVTGKDDDMDKFMRKKETKETKETNVVMPPQEEQKKGTSSSVTQTPSGKTFQTKPAPTIQPVLDGGIFPTVRRFQSSGLSAADPIEGYPHRKEEKSEDADIEQINAFVHAPTAEFHSGRVKWE
SIO_010081: HDEF_RS02090
subclass of: SO_0000673
so part of: HDEF_RS02090
location: complement(419428..420087)
location: region:419428-420087:-1
so has part: feature:419428-420087:-1:exon

WP_012738130.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:419428-420087:-1:exon

HDEF_RS02095
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS02095
old locus tag: HDEF_0419
so part of: sequence
location: complement(420074..420874)
location: region:420074-420874:-1
so has part: feature:420074-420874:-1:exon
subclass of: SO_0000010

66260317
type: Gene
SIO_000068: ncbigene

position:420074:-1
position: 420074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:420874:-1
position: 420874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:420074-420874:-1:exon

HDEF_RS02095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS02095
old locus tag: HDEF_0419
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857440.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TrbG/VirB9 family P-type conjugative transfer protein
translation: MKKWMAATFIFAAFAYEVPAETLGRGSSLDKRIRTALYSPDNVYRLNTMKNRTSTIQFPSGETVNLGSGLIATGHPGAWVIGANQEGNMVVVKPEMNAIEPDTNVIINTNKRTYLIELRLIDNPAAMTYLLRFKYPEPPKPAKTRFKGSQLNKNPCDGRINRHYQKRGDMPLSPDEMWDNGTFTCLRFPTNAPRPVIYQVLPDGTETLANVRSVNDIMVVHGVSQRFRLRLNRLVLELRTEQNNTGGYNYHGTTTGQIREVKDVGQ
SIO_010081: HDEF_RS02095
subclass of: SO_0000673
so part of: HDEF_RS02095
location: complement(420074..420874)
location: region:420074-420874:-1
so has part: feature:420074-420874:-1:exon

WP_012738131.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:420074-420874:-1:exon

HDEF_RS02100
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS02100
old locus tag: HDEF_0420
so part of: sequence
location: complement(420878..423994)
location: region:420878-423994:-1
so has part: feature:420878-423994:-1:exon
subclass of: SO_0000010

66260318
type: Gene
SIO_000068: ncbigene

position:420878:-1
position: 420878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:423994:-1
position: 423994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:420878-423994:-1:exon

HDEF_RS02100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS02100
old locus tag: HDEF_0420
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001773446.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VirB8/TrbF family protein
translation: MLIRVRGYNKGIKAYLEKGIKNGRDYGREELDERVILDGDLDLTEIIYQQIPDKGQDRYLTFTLSFRENEVSKEILNNITQEFREFFMYAYEDEEYHFYAEAHLPKIKAMKDKKTGEMIERKPHIHIVIPKKNVLSGKIGDPLGSHFSQSVKYLEAFQEYINQKYQLASPRDSIRVDPTQAADVLSRYKGDDFRSQHQSFKRQLIFDVIEKNIRDREAFYGHVSSFGETKLRHKGKENEYIAVKLPGEAKWTHLKETIFQDDFVVRREVKKPPLDKTIIRDRLCGWPQRAKEIKYVSKATPQFRHRYRWASPEEKIQLLTQRQTAFYEKYREIYDLYPAERKSDQQRSSAQTERERAACAPHGLQSVSCGDVATDRDSEYAENTVFLPGHAYVHLGQSTSGRSARLRSDLSAGGRRRGASGQPDFDRFTALSGVPTVEDIARRQGFRIRDGLGGSPAGTLTLPPYARDLYRVATLEEIKQRGKRLFGASERPLKSNTVSSLRRLMPKPDKNASFLAAYFLRQHEQNSILPEHRQAIRAVDRQFFTARRTILSDNRLTRDEKTQSVSVFTFERLKAHEAIKQLEIAFKQERPDMGSADIRQKIKATRIPNPSFSGDTVEGAEIPPARARFARLIQHLSGHFTENRLRDRQRMMSASDLYTKRAKLSKNVHYLDKKTDRTLFVDIGHAIAVRKGGMTDSAVAVALSLAKEKFGSTLTIKGSDDFKKQVIEVAVRDYLDVHFTDKVMNRQFEERKEERAIEREGQRVEEPTKSRDPDPEKASVDDEDPSLERTHDNNLGEQKKKSHVEPSPPDEETEGPTLKNVAQEYRRQARHSQYLCIFFGVLALMSLGAVLGLTPLKTVEPYLVRVDNHSGYTDIVAPLTAGKKTDQVQDEYWLSTYVRTYESYNWSSQTSNYALIKLFSYSDPFTEYKNFQLSSKGYTEILGKNRQIRTKINHIVPMRAAIGKELQADKEIKTYQVRFTKTILDRHGNPDPQSQVTHWLATVSFDYHNPSVTQEERWLNPLEFGVHAYSKTQEVKGG
SIO_010081: HDEF_RS02100
subclass of: SO_0000673
so part of: HDEF_RS02100
location: complement(420878..423994)
location: region:420878-423994:-1
so has part: feature:420878-423994:-1:exon

WP_012738132.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:420878-423994:-1:exon

HDEF_RS02105
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS02105
old locus tag: HDEF_0421
so part of: sequence
location: complement(423984..424334)
location: region:423984-424334:-1
so has part: feature:423984-424334:-1:exon
subclass of: SO_0000010

66260319
type: Gene
SIO_000068: ncbigene

position:423984:-1
position: 423984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:424334:-1
position: 424334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:423984-424334:-1:exon

HDEF_RS02105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS02105
old locus tag: HDEF_0421
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006707609.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSEKKKKDKVVSFRLSEKDFSQFEKKLASSCMNQSEFFREVFLHSNIQLTVKSAPSKNLERLTFLFNKSSHHLNQIAHQLNQAHLMGKIPLSFYSSLNNALISIRDLLITEIKDVD
SIO_010081: HDEF_RS02105
subclass of: SO_0000673
so part of: HDEF_RS02105
location: complement(423984..424334)
location: region:423984-424334:-1
so has part: feature:423984-424334:-1:exon

WP_044612246.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:423984-424334:-1:exon

HDEF_RS02110
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS02110
old locus tag: HDEF_0423
so part of: sequence
location: 424654..425064
location: region:424654-425064:1
so has part: feature:424654-425064:1:exon
subclass of: SO_0000010

66260320
type: Gene
SIO_000068: ncbigene

position:424654:1
position: 424654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:425064:1
position: 425064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:424654-425064:1:exon

HDEF_RS02110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS02110
old locus tag: HDEF_0423
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006707076.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNDSIKDQINNLISLLNDPNIKSKQAAFNVCFEQLTQAKKLASWETIVSIINIETGMVFDAKTAANMYGRTKKKYLNKKKIIKPKGVNPIENNEFVSTEINKNKIHQNQKRHVSNPDELRKIRSRTIDLDELKNGD
SIO_010081: HDEF_RS02110
subclass of: SO_0000673
so part of: HDEF_RS02110
location: 424654..425064
location: region:424654-425064:1
so has part: feature:424654-425064:1:exon

WP_012738135.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:424654-425064:1:exon

HDEF_RS02115
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: stbB
locus tag: HDEF_RS02115
old locus tag: HDEF_0424
so part of: sequence
location: 425066..425776
location: region:425066-425776:1
so has part: feature:425066-425776:1:exon
subclass of: SO_0000010

66260321
type: Gene
SIO_000068: ncbigene

position:425066:1
position: 425066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:425776:1
position: 425776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:425066-425776:1:exon

HDEF_RS02115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: stbB
locus tag: HDEF_RS02115
old locus tag: HDEF_0424
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006707077.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: StbB family protein
translation: MKVAVLNYTGTVGKTTIAAHLLSPRMNNAPIFAIESINETAEGLGVDVEKMKGNKFRDLFKKIMLEDNAIIDIGASNIEEFMNNMIKFDHSHEEIDFFIVPVTAGTKEQKESISMLDSLSAIGIPPNKIRVIFNRVDSNVLEEFPFIIGFCKKEKSFIANTKCAIWENELFDALSVKGLTVDALMKDETDYKSLLKSKTKASEKDRHHWADMFGLKALSKSVKRNLDDVYLELFNK
SIO_010081: HDEF_RS02115
subclass of: SO_0000673
so part of: HDEF_RS02115
location: 425066..425776
location: region:425066-425776:1
so has part: feature:425066-425776:1:exon

WP_012738136.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:425066-425776:1:exon

HDEF_RS02120
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS02120
old locus tag: HDEF_0425
so part of: sequence
location: 425789..426388
location: region:425789-426388:1
so has part: feature:425789-426388:1:exon
subclass of: SO_0000010

66260322
type: Gene
SIO_000068: ncbigene

position:425789:1
position: 425789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:426388:1
position: 426388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:425789-426388:1:exon

HDEF_RS02120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS02120
old locus tag: HDEF_0425
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857443.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNKENISPRTARDALIIELLGDVGSIHDEIKELPNLLKVSLSESLKMIASAVEEAEKTAEKLKEETQAVLAASSQAQLHQVQENIGKLVKSSIDTAVEKSLSGAKAEIQTLEDRIDSATAGIKKHNLAIMNYVLAIMMTAMIVTMLFSTIYLWGEVHEAREAARYAERNLSIAGSALNTLPEKYQQQIRDEITKARSKN
SIO_010081: HDEF_RS02120
subclass of: SO_0000673
so part of: HDEF_RS02120
location: 425789..426388
location: region:425789-426388:1
so has part: feature:425789-426388:1:exon

WP_012738137.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:425789-426388:1:exon

HDEF_RS02125
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS02125
old locus tag: HDEF_0426
so part of: sequence
location: 426552..426803
location: region:426552-426803:1
so has part: feature:426552-426803:1:exon
subclass of: SO_0000010

66260323
type: Gene
SIO_000068: ncbigene

position:426552:1
position: 426552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:426803:1
position: 426803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:426552-426803:1:exon

HDEF_RS02125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS02125
old locus tag: HDEF_0426
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012738138.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system Phd/YefM family antitoxin
translation: MTTLTSKEFNHEVGKAKRAACQGAVFITDRGKPTHVLLSIDEYRKMTQHSHKNIVEALSMPYLSEIPFETTRLTILTHDKDIF
SIO_010081: HDEF_RS02125
subclass of: SO_0000673
so part of: HDEF_RS02125
location: 426552..426803
location: region:426552-426803:1
so has part: feature:426552-426803:1:exon

WP_012738138.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:426552-426803:1:exon

HDEF_RS02130
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS02130
old locus tag: HDEF_0427
so part of: sequence
location: 426803..427222
location: region:426803-427222:1
so has part: feature:426803-427222:1:exon
subclass of: SO_0000010

66260324
type: Gene
SIO_000068: ncbigene

position:427222:1
position: 427222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:426803-427222:1:exon

HDEF_RS02130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS02130
old locus tag: HDEF_0427
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012738139.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system VapC family toxin
translation: MFILDTNVISELRKVGDGKANKCVTNWLSSVNSQQLYLSVITLLELERGVLRIERKDDIQGKVLRRWLDGSVLPFFSGRVLPLDVAVVRKCARLHVPDPKPESDTLIAATALVHGFTIVTRNIKDFSATGVNLINPWEE
SIO_010081: HDEF_RS02130
subclass of: SO_0000673
so part of: HDEF_RS02130
location: 426803..427222
location: region:426803-427222:1
so has part: feature:426803-427222:1:exon

WP_012738139.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:426803-427222:1:exon

HDEF_RS02135
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS02135
old locus tag: HDEF_0428
so part of: sequence
location: complement(427223..428173)
location: region:427223-428173:-1
so has part: feature:427223-428173:-1:exon
subclass of: SO_0000010

66260325
type: Gene
SIO_000068: ncbigene

position:427223:-1
position: 427223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:428173:-1
position: 428173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:427223-428173:-1:exon

HDEF_RS02135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS02135
old locus tag: HDEF_0428
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857447.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretion system protein
translation: MDVYIAKTLYQAIDEGLKGTIAIGTANVMTLTGVIFGTCWLIHLTLKSIYWLFQGLDVAFQDLLLTLGKASFIIYFAFNVRWYIDTVVPVVNGLPNWMAQTLSSSGLAQSNQVDTVISNFFTALNNTIGALEFSIWKEAAAMCLGFLALLFFLLGGIPFIMVVVGTLITLKAATSIILVVGPIFIAFSLFDQTRQWFWGWVSVIGGFMLTQILFGVVLAIELNFIHSVIIKNGKIETDILSCFALLLYFSAFTLLATELPNYAASIMGGTPSGGVSGVGGILGRGTGLRAAGNMSQAAGKGIMKGVNKLRNRNRIT
SIO_010081: HDEF_RS02135
subclass of: SO_0000673
so part of: HDEF_RS02135
location: complement(427223..428173)
location: region:427223-428173:-1
so has part: feature:427223-428173:-1:exon

WP_012738140.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:427223-428173:-1:exon

HDEF_RS02140
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS02140
old locus tag: HDEF_0429
so part of: sequence
location: complement(428196..428552)
location: region:428196-428552:-1
so has part: feature:428196-428552:-1:exon
subclass of: SO_0000010

66260326
type: Gene
SIO_000068: ncbigene

position:428196:-1
position: 428196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:428552:-1
position: 428552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:428196-428552:-1:exon

HDEF_RS02140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS02140
old locus tag: HDEF_0429
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006705275.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MMQYQKAGLLGMLLLSVALVLAGCKDKGEAFVGHWVQVGDIEKPASLDIKFDDGVFHVNYSWHTPFIFKKGDETLRVKKLEAKAESDNVLSLINGFGQTMRLNEGVISFYNKEFKKQD
SIO_010081: HDEF_RS02140
subclass of: SO_0000673
so part of: HDEF_RS02140
location: complement(428196..428552)
location: region:428196-428552:-1
so has part: feature:428196-428552:-1:exon

WP_012738141.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:428196-428552:-1:exon

HDEF_RS02145
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS02145
old locus tag: HDEF_0430
so part of: sequence
location: complement(428549..428980)
location: region:428549-428980:-1
so has part: feature:428549-428980:-1:exon
subclass of: SO_0000010

66260327
type: Gene
SIO_000068: ncbigene

position:428549:-1
position: 428549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:428980:-1
position: 428980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:428549-428980:-1:exon

HDEF_RS02145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS02145
old locus tag: HDEF_0430
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006707617.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system VapC family toxin
translation: MKKMYMLDTCICSFIMREQPLHLLQRLHACVDSKNQIVVSAITYAEMQYGVIGKKASPKHAVLVNQFIQRLNAVLPWDKAAVDTTVELKKQLSAAGTPIGVNDSAIAGHALSCGAILITHNLGEFSRVPGLIIQDWTQQKEDS
SIO_010081: HDEF_RS02145
subclass of: SO_0000673
so part of: HDEF_RS02145
location: complement(428549..428980)
location: region:428549-428980:-1
so has part: feature:428549-428980:-1:exon

WP_044612247.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:428549-428980:-1:exon

HDEF_RS02150
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: vapB
locus tag: HDEF_RS02150
old locus tag: HDEF_0431
so part of: sequence
location: complement(428977..429207)
location: region:428977-429207:-1
so has part: feature:428977-429207:-1:exon
subclass of: SO_0000010

66260328
type: Gene
SIO_000068: ncbigene

position:428977:-1
position: 428977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:429207:-1
position: 429207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:428977-429207:-1:exon

HDEF_RS02150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: vapB
locus tag: HDEF_RS02150
old locus tag: HDEF_0431
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001261288.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system VapB family antitoxin
translation: MRKVAIFKNGKNRAVRLPVDMDFAGVNELMIQREGDTLVLKPVRPTWTTLPDNSEKADADFLVERETVIEEGRFSL
SIO_010081: HDEF_RS02150
subclass of: SO_0000673
so part of: HDEF_RS02150
location: complement(428977..429207)
location: region:428977-429207:-1
so has part: feature:428977-429207:-1:exon

WP_012738143.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:428977-429207:-1:exon

HDEF_RS02155
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS02155
old locus tag: HDEF_0432
so part of: sequence
location: complement(429281..429967)
location: region:429281-429967:-1
so has part: feature:429281-429967:-1:exon
subclass of: SO_0000010

66260329
type: Gene
SIO_000068: ncbigene

position:429281:-1
position: 429281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:429967:-1
position: 429967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:429281-429967:-1:exon

HDEF_RS02155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS02155
old locus tag: HDEF_0432
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006705832.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretion system protein
translation: MTDLENLRKKTAVTVLLAGIYLFMPGSKAEIPTISPAELAQQVTHAKQQSREAVAQLKKAKEAIAQTKSQYDHYQKLIQGNSKLGDFLNDPVVNNLIPMGDWEDIYNDIESLPNLRQRYGLTSVDPEVQKAFDQLLMKAGTLEKEKKASDQRVLNAQKLRAKLNVVQTPQEKQDLSLRYQQEMLELQIQQTRLQNMRALAEEKEKLADRKRAQDFTDYMLRKRPDLPK
SIO_010081: HDEF_RS02155
subclass of: SO_0000673
so part of: HDEF_RS02155
location: complement(429281..429967)
location: region:429281-429967:-1
so has part: feature:429281-429967:-1:exon

WP_012738144.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:429281-429967:-1:exon

HDEF_RS02160
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS02160
old locus tag: HDEF_0433
so part of: sequence
location: complement(429964..431067)
location: region:429964-431067:-1
so has part: feature:429964-431067:-1:exon
subclass of: SO_0000010

66260330
type: Gene
SIO_000068: ncbigene

position:429964:-1
position: 429964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:431067:-1
position: 431067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:429964-431067:-1:exon

HDEF_RS02160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS02160
old locus tag: HDEF_0433
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: VirB4 family type IV secretion system protein
translation: MTNAGKTTLEACMLIHFSRWDPMIFSIDYNHSLENVLRASGTHYFTVSPGVYTGIQPFQFEDSPSLRQFLFDTVKLCAGKAEPDEEREIQDGIEAVMRHSVIENRSLSLMLQGIPKKGGNCLHTRLAKWCRNVDGHQGQYAWVLDAPVNLFDPKIFRRLAFDCTKILNKAYSGKHPEAMEVMLNTFFYLKRAMHATEPGSLLINVIAEYWVPLSFESTAEAIKEILKAGRTRGEILMMDTQSPEDALSTQYAPAVIQQVITQIWMANSKAKRESYREFGIEGKEFDKVVELIPSSREFMVKQGHQAVMVKFVLDEKLKYWLPLLSSTDENLAVAERIRRDLNTEDPSVWVCAFLAEMQQRHQQEKTS
SIO_010081: HDEF_RS02160
subclass of: SO_0000673
so part of: HDEF_RS02160
location: complement(429964..431067)
location: region:429964-431067:-1
so has part: feature:429964-431067:-1:exon

WP_012738145.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:429964-431067:-1:exon

HDEF_RS12945
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS12945
old locus tag: HDEF_0434
pseudo: true
so part of: sequence
location: complement(431482..>431769)
location: region:431482-431769:-1
so has part: feature:431482-431769:-1:exon
subclass of: SO_0000010

70691995
type: Gene
SIO_000068: ncbigene

position:431482:-1
position: 431482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:431769:-1
position: 431769
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:431482-431769:-1:exon

HDEF_RS12945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS12945
old locus tag: HDEF_0434
inference: COORDINATES: protein motif:HMM:NF024751.2
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: HDEF_RS12945
subclass of: SO_0000673
so part of: HDEF_RS12945
location: complement(431482..>431769)
location: region:431482-431769:-1
so has part: feature:431482-431769:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:431482-431769:-1:exon

HDEF_RS02170
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS02170
old locus tag: HDEF_0435
so part of: sequence
location: complement(431854..432213)
location: region:431854-432213:-1
so has part: feature:431854-432213:-1:exon
subclass of: SO_0000010

66260332
type: Gene
SIO_000068: ncbigene

position:431854:-1
position: 431854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:432213:-1
position: 432213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:431854-432213:-1:exon

HDEF_RS02170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS02170
old locus tag: HDEF_0435
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006704235.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS630 transposase-related protein
translation: MSHSVDFRRHVLNVREKEKWSIRETAKRFHIGATSITRWLKRIEKNPSSPRQRKIDKAALLKDVERYPDAYQHERAKRFGVCTKAIWSALKRLGVTYKKNPQSSQGQRRYEASLPKQDS
SIO_010081: HDEF_RS02170
subclass of: SO_0000673
so part of: HDEF_RS02170
location: complement(431854..432213)
location: region:431854-432213:-1
so has part: feature:431854-432213:-1:exon

WP_012738147.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:431854-432213:-1:exon

HDEF_RS12950
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS12950
old locus tag: HDEF_0436
so part of: sequence
location: complement(432279..432431)
location: region:432279-432431:-1
so has part: feature:432279-432431:-1:exon
subclass of: SO_0000010

70691996
type: Gene
SIO_000068: ncbigene

position:432279:-1
position: 432279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:432431:-1
position: 432431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:432279-432431:-1:exon

HDEF_RS12950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS12950
old locus tag: HDEF_0436
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSGIIGFFVAIGVLVKTFWFKIKGFLGLSKSKKNDSMKHSDLQDKGEERK
SIO_010081: HDEF_RS12950
subclass of: SO_0000673
so part of: HDEF_RS12950
location: complement(432279..432431)
location: region:432279-432431:-1
so has part: feature:432279-432431:-1:exon

WP_012738148.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:432279-432431:-1:exon

HDEF_RS02175
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS02175
old locus tag: HDEF_0437
so part of: sequence
location: complement(432727..435045)
location: region:432727-435045:-1
so has part: feature:432727-435045:-1:exon
subclass of: SO_0000010

66260333
type: Gene
SIO_000068: ncbigene

position:432727:-1
position: 432727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:435045:-1
position: 435045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:432727-435045:-1:exon

HDEF_RS02175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS02175
old locus tag: HDEF_0437
inference: COORDINATES: protein motif:HMM:NF012573.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: calcium-binding protein
translation: MTTLEEYIYPDDVESRLNAYSSVQNIPKNELESVDSEHYYFEPSPLHGVNDLIEATSHSDRPEPTLKNVTLFKIERGVNQGPLTTLFHLGDGNDRARGQGERKNIFKGGDGTKHYTGGNQADVFYLFTATVPETRSYFNGGEGEDLIIAERDLKGTPYQGYGINLQKNEVRFRINQTENFWPLIGNLKEIEHIHGHMNTPDYLVGNEKNNILNGLGGRDEIWGHEGNDTLILEQGITSGGPGIDHTIILKNTQPHPVTVRIDDEGEEALSLITFQYRYEEIKDFTLHLNDDEQYDLQILLKAKDKAETTVIIKNAYQCEGAGKNQLLSSSAYIFNTSDGISLFAQFPELIQKNAQGEFPFIPRFQTQYTTLLDAPHQDYFKMQEPDNIRLSLNKSPDGDFVSVGKDTLRLSLNTQLVLNDTPFDDILNGDRQDNVLISSRGNDKLRGGKGQDIYQIQMKDSAQTERTVSIDNKDDQAEPEVDLLMLPFKIEDLQIETSGQHVILSPSNEPQTNLRIKLLDFIRDRAYRHLMLMDVEQQLFEISLNQEKTPYFSHPQSHVNETENADFLRIYGGDFLADNTLDAKEGNDNIFDDSARLHTLRGGEGDDTIITTKGNKKLFGDAGHDQLFSGQGDDELNGGQGNDRLSGGKGDDTYWIERDHGLTNIEDSGGNDKIVLTGMALNDLRVVKKDEDMYLFSAQEDAQNPFSIKIKKGASSSEHKIEHLFVNGQLALIEEIASWDANEKQAFIDQHNHAFLFQCGPFSGLGELFNRH
SIO_010081: HDEF_RS02175
subclass of: SO_0000673
so part of: HDEF_RS02175
location: complement(432727..435045)
location: region:432727-435045:-1
so has part: feature:432727-435045:-1:exon

WP_012738149.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:432727-435045:-1:exon

HDEF_RS02180
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS02180
old locus tag: HDEF_0438
so part of: sequence
location: complement(435055..438603)
location: region:435055-438603:-1
so has part: feature:435055-438603:-1:exon
subclass of: SO_0000010

66260334
type: Gene
SIO_000068: ncbigene

position:435055:-1
position: 435055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:438603:-1
position: 438603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:435055-438603:-1:exon

HDEF_RS02180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS02180
old locus tag: HDEF_0438
inference: COORDINATES: protein motif:HMM:NF015505.2
GO function: GO:0004197 - cysteine-type endopeptidase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YopT-type cysteine protease domain-containing protein
translation: MPQKYSTTFIPPSHFFTFNQYDYFGIKTRDRIDLIKQLSPYYENKGLCLALSIRYLIEERHHPMVGGKNYLFWLKNLVNSETDAALTTKGVEDIDAVKKKILNHYRRQHLSTELEKLVALNSSQEMEIAARELKKELKSPTDATSSQHKKDLRNYAQHLFIQARKEYADSVEASGLKFDIQQTNLITHLSSRIHISYLHFLHQLKDLNENKYYLLCIGQHAMAVSFIKKDNKHYWTFFDPNIGAFSFEDYEQWHYFMSHTLFYSVIPGTEKRRYDFSDLKNIKNATIVYTPFVSRKNDIDKTPWRKIFDYQEDYLILSLFNLYKQNKKFRLSEDIEAQITGYIQDRKRKKIHKIELRIFYQNTEKRLILPFHSWNEIRQLMNKRIDSRGRLILNDDLIQGPFTDVQLISDLTPADTLSGRVRQAITLISKIAEGRLAYDFIEQDGGMHRLFKGFFQNDQQGLDKYALMSVIFNIRENQQWMSQAKKLLMMDSLHHKFTQLTDQQALEICSQANILKNRHTLDLISLLFKENPPDFSLHAIAQTVYVFNGYQDSHRDTHALGLLWMKNQMRAQGEADFFSNAISTHTFLNHQKSDIPLNQEDAHRLSAFNEKFSSLRQKIEKNDPHFFQTNDALTVELPQKKGFYWILSDKHLLGLAIQEEKLTLYDPNFGEIIQHKKTSPHRLTRFLKAYLDCKVDGHQTRGELYGFEQFEGHYRFTIKEAHLDRLTPSTKTELEHFNTLMAGYTAEKKWIEKLPEVTMEGLSFAPALMDKMGVMKKNRTLSSRDFKQTEFSFSDLQFHAQKLTSYFSETEISDPHFKTAIDILRKKSQQASQGNFLMGGNMEDKMDATALKALLARESFQSSSDGVKKTSLLKTLSSPHHAKIMTRLHHSMQFYAYWLAFREWITVSELLHNIHLTQEQRTHFNGQLTLLKAALSANIFTDLAGLGLHQWGTHLNKMSQHLMSYSHIKKIKFDLGRLLTRYGVPVLQIFNAGFDIYEGVNALKALSDTADRDRRQDLIVQAALSWAGALLSISVAMGYLIAATTASATAATLAAFAGPVGLGAGVVLLAASQLYKGFRQLEDLQKHIELTTTEKWHNLGRALLGLDISTPVKERYDQTRTRVRADYDGKLHKQAEALFDQPAWSDIAEYYYSAGDFTLTKRFFKKIIRIKNRLHVPIHNLG
SIO_010081: HDEF_RS02180
subclass of: SO_0000673
so part of: HDEF_RS02180
location: complement(435055..438603)
location: region:435055-438603:-1
so has part: feature:435055-438603:-1:exon

WP_044612248.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:435055-438603:-1:exon

HDEF_RS02185
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS02185
old locus tag: HDEF_0439
so part of: sequence
location: 438843..444218
location: region:438843-444218:1
so has part: feature:438843-444218:1:exon
subclass of: SO_0000010

66260335
type: Gene
SIO_000068: ncbigene

position:438843:1
position: 438843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:444218:1
position: 444218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:438843-444218:1:exon

HDEF_RS02185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS02185
old locus tag: HDEF_0439
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857177.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: C80 family cysteine peptidase
translation: MTQKKSPDSLMTYHQSDVPVRRKKRTPTGFVPVDQWEVQSVITRSDGGSTRYAGQLIIQLENDPMIRRAATRLAEKHPGSVLVQVDQKNTYRVLSGFPNTLEGKLRWQIVGHGSGVHTSETPAVIGTLSGMDPVYLAQLLKKFNQHFSTTYDIDSTPNRISLVGCELARPTSPNFATQFAHEMKSVGILADISARTELVAVAQGSGKKFTAKTKLTNPAQTAGNTLLLGWNKNGELIHKKHSSAFRLLSPVLETWAPQHFTDPKRNSKEFRYLVYSSSIKDLLSRKGIFSKNIRDKLRQSDVMSASILSNQTLRGHTVGVILEVPEQNILAAAPDENIIEPKLDGVIKISDDERPAVKTHGLQKINQMINGEQLPPTNSTPLSSLARNGLLNQLFSYPQRVSVPDDIIHKTITRNTVLVTGRPDINIYPHYPVTGEIKITGLFLTGFDTSGNTGEAQGFSLSEQLTSKNFQLLREAARDITQELNIELKVIKIRPGTDGPKGHQRNITPQINQDKSIMPLDMAPDQKNLGASLIENLKRVSSLINDLSSRKGRVFKPSDLKLLTEFFHLSSGELDWRKLYQTLSDPLLYSQFMNQIQSLMQLSDTHDQFMSVTGQSALRRTADWDTFVVDNLLNWNERIKKHNHTPEWHFQIHPSMQAIYMIDGSELAQQKAKKVSLAYLSMLTLDNKNLRLKLLNAFQTHAEINEQKIFAPLDDEGAKIFGHLIHQLEDTSVFMEKGPRNLSQFFNILANQTAGYYQLRMGGHILTIAKRQGKNQQTNWYLYDANFGEIQITIPDVEKTSTPIRLLLHDYFTRLKNVPQQDNRAVVFDVYQLNADKLSASIPFKKLTQFISNTNNLLSSSSTHEPIKLQKNRVSQTMSRTYHTVGMIGQAHQGLSWIRSVTCLSHYWRRRSAEQLNPSQKQALDFEAQLAIAGLLYDVESTLLESGFRKLGSHLIQKFSSQAVRVFASRIQRLQYAAGLKLARYGGAFLNMLGTGFDIYQAQKAATELTTETDPDVRQDLQVSLALSSLGASIGIASGLALLTLTGKMALIAGAMGIALGILTAVVGGIYFSVRQVQEIERYTTLTGLQKLRTGWLKFWGAEVDIEITNQVTKGKAEIEAKKNLHRQCQNTFQALLDSDEQIEAVYYSSGKIILGEYRYKKLTGKRWTMLGNRLIPQCEYLFINNIKDKILPSQALGILSNYQTQKWQNQPLYVDLRLENSEYKFYDIERLSPTDDQISLDTDAHSESILSLKRPVEPSSFSSPSASVVKSNTADFKNPARIYFFLGDGDDEVVGHPEKRNIFDIGAGVKNFKGGNQSDMFIFNGTSAPAQPCVFDGMNGVNFLVANKKPSQGGYYVNLKEASFHFTHEPQKIAKLKNIDHVETCADTDDVILGNAQANILNGKGGKDKLMGFDGNDILVAQSGKLDGGKGTDSYRVLQNTRSEPAILIIEEEEDPEEFSHVFLDYAVTQIISIKRIKQHVVIELRNDNQSITTLTLFYLYCSVEPKTRKLTQQYIFYTQDGVIFTGLPAEIAVNPDEEEPEPLTLMAQYAPKFDQTFHFPKTDSEKAPVIIQKMPHQKHLGVLDVRGEKKLLPDFLRLLPQETGFDDHLQGDELRNTLHSKKGQDILEGKGERDVYIIEDRPMGTEVSINNYDQPETGEPEQDILLLPFLLDDIEIRQEKKHVILSHLDSPTEHVTIRLMNFMEEKSYRHLSIMDKEGRIHTVRLNSSDEPDLIVDQLIPDITVSDGHHILSQLRQTNAGFSEVEQVFNIPGDKILQTLQAKMIPVISS
SIO_010081: HDEF_RS02185
subclass of: SO_0000673
so part of: HDEF_RS02185
location: 438843..444218
location: region:438843-444218:1
so has part: feature:438843-444218:1:exon

WP_012738151.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:438843-444218:1:exon

HDEF_RS12385
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS12385
old locus tag: HDEF_0440
so part of: sequence
location: 444354..444569
location: region:444354-444569:1
so has part: feature:444354-444569:1:exon
subclass of: SO_0000010

66262051
type: Gene
SIO_000068: ncbigene

position:444354:1
position: 444354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:444569:1
position: 444569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:444354-444569:1:exon

HDEF_RS12385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS12385
old locus tag: HDEF_0440
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDKIPPTILGRLSLVDKALLVTVHSIERAEAVQKYLKDLLDNLHWRATLSPENVQVMMEHVRRESCTTEVP
SIO_010081: HDEF_RS12385
subclass of: SO_0000673
so part of: HDEF_RS12385
location: 444354..444569
location: region:444354-444569:1
so has part: feature:444354-444569:1:exon

WP_012738152.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:444354-444569:1:exon

HDEF_RS02195
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: ltrA
locus tag: HDEF_RS02195
old locus tag: HDEF_0441
so part of: sequence
location: 445115..446797
location: region:445115-446797:1
so has part: feature:445115-446797:1:exon
subclass of: SO_0000010

66260336
type: Gene
SIO_000068: ncbigene

position:445115:1
position: 445115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:446797:1
position: 446797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:445115-446797:1:exon

HDEF_RS02195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: ltrA
locus tag: HDEF_RS02195
old locus tag: HDEF_0441
EC number: 2.7.7.49
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015873279.1
GO function: GO:0003964 - RNA-directed DNA polymerase activity [Evidence IEA]
GO process: GO:0000373 - Group II intron splicing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: group II intron reverse transcriptase/maturase
translation: MPMANVINQNYEQQLEWHAINWRVVTAMINNLRQRIYRASATGDLKKVRNLQKLMMKSRANHLLAIRKVTQVNRGKHTAGVDNQVINDHKGREHLYKLLSQTTSEKVYPVKRVYIAKKNGKKRPLGIPTILDRCRQAIVKSALEPYWEAKFEPVSYGFRPGRSAHDAIQKIFCIARARGTRHWVLDADIKGAFDNIDHNFLIKKIGGFPERNMIKQWLQAGVLEHGNYIPNVAGTPQGGIISPLLANIALHGMETLLGIQYWKNGTPKQGQPYAVVRYADDFVVFGKSREECETAKIKLQIWLAQRGLALSEEKTSIKHLKEGFDFLGFNIRHYDNRHRKRGYILLTKPSKESMKRYKQQMRMTWKGIIGMPTQEGIRQLNAKIIGWCNYYRIGASKRTFSALDQWMWIRQRRYLYRRHPNKHWWWRRKHYLGKIPGREDYSVFMDKSTGGFLWKHAWTKIQRHWLVPKNASPDNPELRDYWRNRQARKQPFIYGVKVNLYKRQKGYCPLCDQELDNGEQLHVHHIQPKAEGGDNKLANLRLLHANCHRQLHSKKGKMLK
SIO_010081: HDEF_RS02195
subclass of: SO_0000673
so part of: HDEF_RS02195
location: 445115..446797
location: region:445115-446797:1
so has part: feature:445115-446797:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:445115-446797:1:exon

HDEF_RS02200
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: rluC
locus tag: HDEF_RS02200
old locus tag: HDEF_0442
so part of: sequence
location: 447040..447990
location: region:447040-447990:1
so has part: feature:447040-447990:1:exon
subclass of: SO_0000010

66260337
type: Gene
SIO_000068: ncbigene

position:447040:1
position: 447040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:447990:1
position: 447990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:447040-447990:1:exon

HDEF_RS02200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: rluC
locus tag: HDEF_RS02200
old locus tag: HDEF_0442
EC number: 5.4.99.24
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004873856.1
GO function: GO:0009982 - pseudouridine synthase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO process: GO:0001522 - pseudouridine synthesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 23S rRNA pseudouridine(955/2504/2580) synthase RluC
translation: MEFSSSVQSITISDDNAGQRIDNFLIRFLKGVPKSMLYRILRKGEVRVNKKRIKPCYKLLTGDMLRIPPIKTAIIQNKPISIKCNKVVALAQSILFEDPDILILNKPSGTAVHGGSGLSFGVIEALRALRPDQRFLHLVHRLDRETSGILMVAKKPYALRSLNEQLRLKTMKKEYLALVAGDWPLSCKLIQAPLQKNILQNGERIVKVSHQGKESQTHFEIEERFTNTTLMKVRPLTGRTHQIRVHALHAGHPIVFDDRYGDPEFEKKLKGCHLNRLFLHALSLEFVHPHSGETIQIKAPLDNSLRHCLQFLRHQK
SIO_010081: HDEF_RS02200
subclass of: SO_0000673
so part of: HDEF_RS02200
location: 447040..447990
location: region:447040-447990:1
so has part: feature:447040-447990:1:exon

WP_086934970.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:447040-447990:1:exon

HDEF_RS02205
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS02205
old locus tag: HDEF_0443
so part of: sequence
location: 448060..448590
location: region:448060-448590:1
so has part: feature:448060-448590:1:exon
subclass of: SO_0000010

66260338
type: Gene
SIO_000068: ncbigene

position:448060:1
position: 448060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:448590:1
position: 448590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:448060-448590:1:exon

HDEF_RS02205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS02205
old locus tag: HDEF_0443
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012738154.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YceD family protein
translation: MQKIKLPLTIDPIFAADKGLEYRGFCESDQFVRIAESVDSIESDIDVFLLFRIDEKQRAFIKGHANVDLKLTCQRCCSTFLYHLKTEYCFIPVTSGTYDKLSETCRGLYDFIEMNEAGELNLLSMIEDELILSIPAFPVHEDKDCHLFFTKMGEGLVQEQAKKSHPFSVLSRLKKK
SIO_010081: HDEF_RS02205
subclass of: SO_0000673
so part of: HDEF_RS02205
location: 448060..448590
location: region:448060-448590:1
so has part: feature:448060-448590:1:exon

WP_012738154.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:448060-448590:1:exon

HDEF_RS02210
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: rpmF
locus tag: HDEF_RS02210
old locus tag: HDEF_0444
so part of: sequence
location: 448607..448777
location: region:448607-448777:1
so has part: feature:448607-448777:1:exon
subclass of: SO_0000010

66260339
type: Gene
SIO_000068: ncbigene

position:448607:1
position: 448607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:448777:1
position: 448777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:448607-448777:1:exon

HDEF_RS02210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: rpmF
locus tag: HDEF_RS02210
old locus tag: HDEF_0444
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011147057.1
GO component: GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L32
translation: MAVQKNKPTRSKRGMRRSHDALTTALLSVDKTSGENHLRHHITTDGYYRGRKVINR
SIO_010081: HDEF_RS02210
subclass of: SO_0000673
so part of: HDEF_RS02210
location: 448607..448777
location: region:448607-448777:1
so has part: feature:448607-448777:1:exon

WP_012738155.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:448607-448777:1:exon

HDEF_RS02215
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS02215
old locus tag: HDEF_0445
so part of: sequence
location: 448997..449941
location: region:448997-449941:1
so has part: feature:448997-449941:1:exon
subclass of: SO_0000010

66260340
type: Gene
SIO_000068: ncbigene

position:448997:1
position: 448997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:449941:1
position: 449941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:448997-449941:1:exon

HDEF_RS02215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS02215
old locus tag: HDEF_0445
EC number: 2.3.1.180
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011093371.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: beta-ketoacyl-ACP synthase III
translation: MQTNILGTGSYLPETVRTNSDLEKMVDTSDEWIFTRTGIRERRIAASSETVASMGFYAATEALKMAQIDQNDIGLIIVATTSSSHAFPSSACQIQEMLGIKDSISFDLAAACAGFIYALSVADQYIKSGTISYALVIGSDLLTQSLDLKDRSTVILFGDAAGAVVLGASDQPGIISTHLHANGHYGKLLTLFYPREKNSPFISMAGNEVFKVAVLELASVVHEALKSNQLDASELDWLIPHQANIRIINATAKKLNIGMEKVVITLDRHGNTSAASVPSALDEAVRDGRIQRGQLLLLEAFGGGFVWGSALVRF
SIO_010081: HDEF_RS02215
subclass of: SO_0000673
so part of: HDEF_RS02215
location: 448997..449941
location: region:448997-449941:1
so has part: feature:448997-449941:1:exon

WP_012738156.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:448997-449941:1:exon

HDEF_RS02220
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: fabD
locus tag: HDEF_RS02220
old locus tag: HDEF_0446
so part of: sequence
location: 449961..450935
location: region:449961-450935:1
so has part: feature:449961-450935:1:exon
subclass of: SO_0000010

66260341
type: Gene
SIO_000068: ncbigene

position:449961:1
position: 449961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:450935:1
position: 450935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:449961-450935:1:exon

HDEF_RS02220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: fabD
locus tag: HDEF_RS02220
old locus tag: HDEF_0446
EC number: 2.3.1.39
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014883378.1
GO function: GO:0004314 - [acyl-carrier-protein] S-malonyltransferase activity [Evidence IEA]
GO process: GO:0006633 - fatty acid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ACP S-malonyltransferase
translation: MTTFAILFPGQGSQSLGMLSSMAKTFPLIIKTFSQASDALGYDLWALTQEGPVSELNKTWKTQPALLTASVAIWRVWKAEGGPSPFMVAGHSLGEYSALVCAGVLNLTETVKLVELRGKLMQAAAGEGAMSAIIGLDDETIVKICKQTAQNQVVSPANFNSQWQVVISGHKEAVERANIACIAAGAKKVFPLSVSVPSHCALMKPAADKLLAELNKMVFKTSKFPVLNNADVKVENSPEHIREALVRQLYSPIPWVKSIQFMIQKGVGSFLELGAGNILSGLNKRIVHKAPAFSVNDAHSLAHALNYVSGKSVNKILKEDIYEI
SIO_010081: HDEF_RS02220
subclass of: SO_0000673
so part of: HDEF_RS02220
location: 449961..450935
location: region:449961-450935:1
so has part: feature:449961-450935:1:exon

WP_012738157.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:449961-450935:1:exon

HDEF_RS02225
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: fabG
locus tag: HDEF_RS02225
old locus tag: HDEF_0447
so part of: sequence
location: 450925..451662
location: region:450925-451662:1
so has part: feature:450925-451662:1:exon
subclass of: SO_0000010

66260342
type: Gene
SIO_000068: ncbigene

position:450925:1
position: 450925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:451662:1
position: 451662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:450925-451662:1:exon

HDEF_RS02225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: fabG
locus tag: HDEF_RS02225
old locus tag: HDEF_0447
EC number: 1.1.1.100
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010297224.1
GO function: GO:0004316 - 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]
GO process: GO:0006633 - fatty acid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 3-oxoacyl-ACP reductase FabG
translation: MRFKGKIALITGATRGIGRAIAQSLTEEGAFVIGTATTEEGAKKVSDDLGDYGKGVTLNVIDEESIEALIKSIEEEFCGPDILVNNAGITRDGLLMRMKTNSWNEVLGTNLTSIFYLSRAALRPMMKKRFGRIINIGSVVGSAGNVGQTNYTAAKAGLIGFSKSLAQEVAQRGITVNVVAPGFIETDMSRQALTETRRTEILKKIPMNRLGDVKDIANAVAFLASDQSSYITGETLHINGGMYMI
SIO_010081: HDEF_RS02225
subclass of: SO_0000673
so part of: HDEF_RS02225
location: 450925..451662
location: region:450925-451662:1
so has part: feature:450925-451662:1:exon

WP_012738158.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:450925-451662:1:exon

HDEF_RS02230
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: acpP
locus tag: HDEF_RS02230
old locus tag: HDEF_0448
so part of: sequence
location: 452028..452279
location: region:452028-452279:1
so has part: feature:452028-452279:1:exon
subclass of: SO_0000010

66260343
type: Gene
SIO_000068: ncbigene

position:452028:1
position: 452028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:452279:1
position: 452279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:452028-452279:1:exon

HDEF_RS02230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: acpP
locus tag: HDEF_RS02230
old locus tag: HDEF_0448
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012738159.1
GO process: GO:0006633 - fatty acid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: acyl carrier protein
translation: MSTNDIEERVKKIIVDQLSVKREEVTNSASFVEDLGADSLDTVELVMALEEEFDTEIPDEDAEKITTVQATIDYIYDQHAKNK
SIO_010081: HDEF_RS02230
subclass of: SO_0000673
so part of: HDEF_RS02230
location: 452028..452279
location: region:452028-452279:1
so has part: feature:452028-452279:1:exon

WP_012738159.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:452028-452279:1:exon

HDEF_RS02235
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: fabF
locus tag: HDEF_RS02235
old locus tag: HDEF_0449
so part of: sequence
location: 452344..453585
location: region:452344-453585:1
so has part: feature:452344-453585:1:exon
subclass of: SO_0000010

66260344
type: Gene
SIO_000068: ncbigene

position:452344:1
position: 452344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:453585:1
position: 453585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:452344-453585:1:exon

HDEF_RS02235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: fabF
locus tag: HDEF_RS02235
old locus tag: HDEF_0449
EC number: 2.3.1.179
inference: COORDINATES: similar to AA sequence:RefSeq:NP_309500.1
GO function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein] synthase activity [Evidence IEA]
GO process: GO:0006633 - fatty acid biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: beta-ketoacyl-ACP synthase II
translation: MFKRRVVITGLGMLSPVGNTVESAWKAVLLGQSGIFLINHFDTSLYETRFAGLVKNFEAKDYIPPKDIRRMDLFIQYGVAAGVQAMRDSGLDVTEQNQSRIGAAIGSGIGGLGLIEDNYSLLVDKEAKKISPFFVPSTIVNMISGHLSIIYGLQGPNIAISTACTSGVHNIGHAARIIVYGDADVMLAGGAEKSTTPLGVAGFAAARALSKRNHDPQAASRPWDKDRDGFVLGDGAGVLVLEEYEHAKKRNAKIYAELVGFGMSSDAHHITNPLENGYGAALAMKNALKDAGVSASKINYINAHGTSTIAGDKAEVEAIKTVFSEDAQNVMISSTKSMTGHLLGAAGAIESIFSILALHDQVAPPTINLDNPDEGFDLDFVPNETRSLKNMEYTLCNSFGFGGTNGSVVFKKI
SIO_010081: HDEF_RS02235
subclass of: SO_0000673
so part of: HDEF_RS02235
location: 452344..453585
location: region:452344-453585:1
so has part: feature:452344-453585:1:exon

WP_012738160.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:452344-453585:1:exon

HDEF_RS02240
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: mltG
locus tag: HDEF_RS02240
old locus tag: HDEF_0450
so part of: sequence
location: 453788..454813
location: region:453788-454813:1
so has part: feature:453788-454813:1:exon
subclass of: SO_0000010

66260345
type: Gene
SIO_000068: ncbigene

position:453788:1
position: 453788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:454813:1
position: 454813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:453788-454813:1:exon

HDEF_RS02240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: mltG
locus tag: HDEF_RS02240
old locus tag: HDEF_0450
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002217396.1
GO function: GO:0008932 - lytic endotransglycosylase activity [Evidence IEA]
GO process: GO:0071555 - cell wall organization [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: endolytic transglycosylase MltG
translation: MKKIYFRACTFFIPICLLISLYVYYEIQHFAHSPLPITKDTILTVPPGTGRIALETILLKNHLLVKTWLLRCLLIIEPQLAEFKAGTYYLLSGMSVKEMLELFASGKEAQFAISFIEGTHWHLWKNEMDKKDNIKHLLQNKTNAEVAQLFKLQSEGHIEGAFYPDTYFYSFGNSDLLILKRAHQKMNETVNQIWEQRNQSLPYKTPDELVTMASIIEKETSINAERKIIASVFINRLRLGMRLQSDPTVMYGLGKNYTEAITHKDLLTVTPYNTYIIPGLPPAPITMPGLASLNAAAHPEETDYLYFVANGEGGHTFSTNLVGHNRAVRAYREALKKKNER
SIO_010081: HDEF_RS02240
subclass of: SO_0000673
so part of: HDEF_RS02240
location: 453788..454813
location: region:453788-454813:1
so has part: feature:453788-454813:1:exon

WP_012738161.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:453788-454813:1:exon

HDEF_RS02245
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: tmk
locus tag: HDEF_RS02245
old locus tag: HDEF_0451
so part of: sequence
location: 454803..455435
location: region:454803-455435:1
so has part: feature:454803-455435:1:exon
subclass of: SO_0000010

66260346
type: Gene
SIO_000068: ncbigene

position:454803:1
position: 454803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:455435:1
position: 455435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:454803-455435:1:exon

HDEF_RS02245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: tmk
locus tag: HDEF_RS02245
old locus tag: HDEF_0451
EC number: 2.7.4.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012738162.1
GO function: GO:0004798 - thymidylate kinase activity [Evidence IEA]
GO process: GO:0015949 - nucleobase-containing small molecule interconversion [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dTMP kinase
translation: MKGKFIVIEGLEGAGKSTAVNTVQQFLRHFKIQDVICTREPGGTALSEEIRHLIKKKSQNEEILTDKAELLLLYAARVQLLENIIKPALSSGTWVIGDRHDLSSQAYQGGGRGIKSEFIKSLADFTLGSSFRPDLTLYLDLPPELGLQRARKRGHLDRIEQQSLVFFERIRARYLELTYDDPRIKMIDASKPIKKVTVDIQNALLSLLEK
SIO_010081: HDEF_RS02245
subclass of: SO_0000673
so part of: HDEF_RS02245
location: 454803..455435
location: region:454803-455435:1
so has part: feature:454803-455435:1:exon

WP_012738162.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:454803-455435:1:exon

HDEF_RS02250
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: holB
locus tag: HDEF_RS02250
old locus tag: HDEF_0452
so part of: sequence
location: 455440..456423
location: region:455440-456423:1
so has part: feature:455440-456423:1:exon
subclass of: SO_0000010

66260347
type: Gene
SIO_000068: ncbigene

position:455440:1
position: 455440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:456423:1
position: 456423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:455440-456423:1:exon

HDEF_RS02250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: holB
locus tag: HDEF_RS02250
old locus tag: HDEF_0452
EC number: 2.7.7.7
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857934.1
GO component: GO:0009360 - DNA polymerase III complex [Evidence IEA]
GO function: GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO process: GO:0006260 - DNA replication [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA polymerase III subunit delta'
translation: MNWYPWLNAHYHQLVEQHILGRGHHALLIHALRGNGKNALIYGLSRWLLCQKRQGKKSCGQCHSCHLMLAGHHPDCHLFKIKENQRNLGIDSIRQVIEKLSHHPQQGGARVISIPNVHDLTVAAVNALLKTLEEPPKNTYFLLGCHTPSVLMPTLKSRCFCWRLFNPPTNLTLTWLAEKTGADPILVSTALKLSSGAPLSALSLLQKDRWNERVFFCLTLSDVLSRQNFLALLPQLNHDNIEDTLHWLISLLLDALKYHHGITFSMINEDQQPLVEKLATLFSISGLFKILRQSIYCRHQLLSIVGINKELLLTEQLLNFENALNEL
SIO_010081: HDEF_RS02250
subclass of: SO_0000673
so part of: HDEF_RS02250
location: 455440..456423
location: region:455440-456423:1
so has part: feature:455440-456423:1:exon

WP_012738163.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:455440-456423:1:exon

HDEF_RS02255
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS02255
old locus tag: HDEF_0453
so part of: sequence
location: 456453..457250
location: region:456453-457250:1
so has part: feature:456453-457250:1:exon
subclass of: SO_0000010

66260348
type: Gene
SIO_000068: ncbigene

position:456453:1
position: 456453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:457250:1
position: 457250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:456453-457250:1:exon

HDEF_RS02255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS02255
old locus tag: HDEF_0453
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857935.1
GO function: GO:0016788 - hydrolase activity, acting on ester bonds [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: metal-dependent hydrolase
translation: MLLVDSHCHLDSLDYKKLHQSVDDVLLKARERNVKFVLCVATTLEGFEHFFSVIGERNDVAFSCGAHPLNLDQHYDMQKLKQLCQLKKVIALGETGLDYHYSSDQIALQKKVFREHIMVGCQLNKPVIVHTRDAFKDTINILKEENARDCGGVLHCFTEDKMAAQQLLDLGFYISFSGIVTFRNASVLRDVVRYIPLDKMLIETDSPYLAPVPYRGKENQPAYVREIAEYIAELKNVNLEKLADTTTSNFIQLFHLSESIFFNIM
SIO_010081: HDEF_RS02255
subclass of: SO_0000673
so part of: HDEF_RS02255
location: 456453..457250
location: region:456453-457250:1
so has part: feature:456453-457250:1:exon

WP_012738164.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:456453-457250:1:exon

HDEF_RS02260
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: ptsG
locus tag: HDEF_RS02260
old locus tag: HDEF_0454
so part of: sequence
location: 457489..458922
location: region:457489-458922:1
so has part: feature:457489-458922:1:exon
subclass of: SO_0000010

66260349
type: Gene
SIO_000068: ncbigene

position:457489:1
position: 457489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:458922:1
position: 458922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:457489-458922:1:exon

HDEF_RS02260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: ptsG
locus tag: HDEF_RS02260
old locus tag: HDEF_0454
EC number: 2.7.1.199
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000475716.1
GO function: GO:0005355 - glucose transmembrane transporter activity [Evidence IEA]; GO:0008982 - protein-N(PI)-phosphohistidine-sugar phosphotransferase activity [Evidence IEA]
GO process: GO:1904659 - glucose transmembrane transport [Evidence IEA]; GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PTS glucose transporter subunit IIBC
translation: MFKNAFANLQKVGKSLMLPVSVLPIAGILLGLGSIHFSFLPDVVSDVMSETGGAIFANMPLIFAIGVALGFTNNDGVAALAAVVAYSIMAKTIAVLESLLLNISSDQIHQHHLNDTGVVGGIIAGGLAAYMFNHFYRIKLPEYLGFFSGKRFVPIISGFFAILLGVLLAFIWPPIGKKIQIFSEWAAYQNPSIAFAIYGFVERAIIPFGLHHIWNVPFQMQVGEYTNSAGQIFHGDIPRYMAGDPTAGKLAGAFLFKMYGLPAAAIAIWHSAKPENRIKVSGIMISAALTSFLTGITEPIEFSFMFVAPVLYVIHVILSGLAFPLCIALGMTSGTSFSQGLIDFILLSGNGHRTVLFPLVGACYALVYYASFRFLITKWNLKTPGRELISTIIDVQNGKQMSEALVENFGGKENIINLDACITRLRVSVADVSKVDQAGLKKLGAAGIVIAGSGVQAIFGTQSDNLKTDMDEYIRNN
SIO_010081: HDEF_RS02260
subclass of: SO_0000673
so part of: HDEF_RS02260
location: 457489..458922
location: region:457489-458922:1
so has part: feature:457489-458922:1:exon

WP_012738165.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:457489-458922:1:exon

HDEF_RS02265
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: ung
locus tag: HDEF_RS02265
old locus tag: HDEF_0455
so part of: sequence
location: complement(459178..459849)
location: region:459178-459849:-1
so has part: feature:459178-459849:-1:exon
subclass of: SO_0000010

66260350
type: Gene
SIO_000068: ncbigene

position:459178:-1
position: 459178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:459849:-1
position: 459849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:459178-459849:-1:exon

HDEF_RS02265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: ung
locus tag: HDEF_RS02265
old locus tag: HDEF_0455
EC number: 3.2.2.27
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011815748.1
GO function: GO:0016799 - hydrolase activity, hydrolyzing N-glycosyl compounds [Evidence IEA]; GO:0004844 - uracil DNA N-glycosylase activity [Evidence IEA]
GO process: GO:0006284 - base-excision repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: uracil-DNA glycosylase
translation: MPASLLTWRDVIGAEKKEFYFKDTLASVAAERRSNKMIYPSPENVFNAFRLTEFGEVKVVIIGQDPYHGPNQAHGLSFSVLPGIVLPPSLVNIYKELLNDIIGFVYPNHGCLENWAKQGVLLLNTVLTVEAGRANSHAHLGWGIFTDRVIAALNQHNHRIIFLLWGSHAQKKGEIIDTQRHFILKAPHPSPLSAHRGFFGCKHFSKTNQLLEQQGLAPISWQP
SIO_010081: HDEF_RS02265
subclass of: SO_0000673
so part of: HDEF_RS02265
location: complement(459178..459849)
location: region:459178-459849:-1
so has part: feature:459178-459849:-1:exon

WP_086934971.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:459178-459849:-1:exon

HDEF_RS02270
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: srmB
locus tag: HDEF_RS02270
old locus tag: HDEF_0456
so part of: sequence
location: complement(459821..461185)
location: region:459821-461185:-1
so has part: feature:459821-461185:-1:exon
subclass of: SO_0000010

66260351
type: Gene
SIO_000068: ncbigene

position:459821:-1
position: 459821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:461185:-1
position: 461185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:459821-461185:-1:exon

HDEF_RS02270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: srmB
locus tag: HDEF_RS02270
old locus tag: HDEF_0456
EC number: 3.6.4.13
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857503.1
GO function: GO:0003724 - RNA helicase activity [Evidence IEA]
GO process: GO:0000027 - ribosomal large subunit assembly [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-dependent RNA helicase SrmB
translation: MMSPPFCEFDLDPCLLRALEDKGYLSATAIQTTVIPKAMEGRDLLGSAPTGTGKTIAFLIPALQHLIDFPKKKPGPPRILILAPTRELAIQVADQATELAKYTSLKVAKITGGVAYMNHTEIFSTNQDILVATTGRLLQYIKEENFDCRAVEILILDEADRMLDMGFAQDIEVISAETRWRKQTLLFSATLESATIREFSERVLRDPIYLEAAPSVRERKKILQSYYRSDNLPHKIALLCYLLKTPSVQKSIIFVRTREKVHELVHRLQSEGIHSGYLEGEMVQTKRTEAIARLNSGRIQVLVATDVASRGLDIEDISHVFNFDMPYTGDVYLHRIGRTARAGRKGTAISLIEAHDHLLLKKVERYLKKTIKPRVVDELRPTTKAPNEKKAGKPSKKVLAKREEQKKAKKEKTKVKVKVKIRHRDKKNLGKRREPKNLKKNKENGNASFSSHLA
SIO_010081: HDEF_RS02270
subclass of: SO_0000673
so part of: HDEF_RS02270
location: complement(459821..461185)
location: region:459821-461185:-1
so has part: feature:459821-461185:-1:exon

WP_012738167.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:459821-461185:-1:exon

HDEF_RS02275
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS02275
old locus tag: HDEF_0457
so part of: sequence
location: complement(461488..462198)
location: region:461488-462198:-1
so has part: feature:461488-462198:-1:exon
subclass of: SO_0000010

66260352
type: Gene
SIO_000068: ncbigene

position:461488:-1
position: 461488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:462198:-1
position: 462198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:461488-462198:-1:exon

HDEF_RS02275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS02275
old locus tag: HDEF_0457
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002210775.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Bax inhibitor-1/YccA family protein
translation: MNRYSKSNGSIIEGRSTGIQVYMSQVYGWMTCGLLLTAFVAWYAANNPAILNLIFSSQIVFFGLIIVQLGLVFVISGMIHKLSGAMATSLFMLYSALTGLTISSIFVVYTQSSIASTFVITAGMFGAMSFYGYVTKRDLTGLGNMLFMGVIGILLASIVNIWLKSSALMWAVTYIGVVLFVGLTAYDTQKLKNMGEQLDSNDKEGFRKYSIVGALTLYIDFINLFLMLIRIVGNRR
SIO_010081: HDEF_RS02275
subclass of: SO_0000673
so part of: HDEF_RS02275
location: complement(461488..462198)
location: region:461488-462198:-1
so has part: feature:461488-462198:-1:exon

WP_012738168.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:461488-462198:-1:exon

HDEF_RS02280
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: tsaD
locus tag: HDEF_RS02280
old locus tag: HDEF_0458
so part of: sequence
location: 462421..463422
location: region:462421-463422:1
so has part: feature:462421-463422:1:exon
subclass of: SO_0000010

66260353
type: Gene
SIO_000068: ncbigene

position:462421:1
position: 462421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:463422:1
position: 463422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:462421-463422:1:exon

HDEF_RS02280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: tsaD
locus tag: HDEF_RS02280
old locus tag: HDEF_0458
EC number: 2.3.1.234
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012738169.1
GO process: GO:0006400 - tRNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD
translation: MRVLGIETSCDETGVAIYDSESGLLADQLYSQVKLHAQYGGVVPELASRDHIRKIVPLIQATLKEACVSPQEIDAVAYTAGPGLIGALLVGASVGRALAFAWNVPAVPVHHMEAHLLAPMLEDQVPDFPFIALLVSGGHTQLVQVNAIGKYALLGESLDDAVGEAFDKTAKLLGLEYPGGAMLAHLAQQGDPDRFIFPRPMIDRPGLDFSFSGLKTAAALTIRANHQDEQTRCDIAYAFEKAVIDTLAIKSERALEQTGLTRLVLAGGVSANEKLRSKLSVIMHERQGKVFYARPQFCTDNGAMIAYAGWRRIQEGSRSDLSISVHPKWALSQ
SIO_010081: HDEF_RS02280
subclass of: SO_0000673
so part of: HDEF_RS02280
location: 462421..463422
location: region:462421-463422:1
so has part: feature:462421-463422:1:exon

WP_012738169.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:462421-463422:1:exon

HDEF_RS02285
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: aroC
locus tag: HDEF_RS02285
old locus tag: HDEF_0459
so part of: sequence
location: complement(463499..464563)
location: region:463499-464563:-1
so has part: feature:463499-464563:-1:exon
subclass of: SO_0000010

66260354
type: Gene
SIO_000068: ncbigene

position:463499:-1
position: 463499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:464563:-1
position: 464563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:463499-464563:-1:exon

HDEF_RS02285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: aroC
locus tag: HDEF_RS02285
old locus tag: HDEF_0459
EC number: 4.2.3.5
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012738170.1
GO function: GO:0004107 - chorismate synthase activity [Evidence IEA]
GO process: GO:0009073 - aromatic amino acid family biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: chorismate synthase
translation: MAGNSIGQIFRVTTFGESHGVALGCIVDGVPPGLWLCENDLQIDLNRRRPGMSPYTSSRRESDQIRILSGIFEGKTTGSSIGLLIENKDARPQDYQSIKDLFRPGHADYTYQKKYGIRDYRGGGRASARETAMRVAAGAIAKKYLFEHFSIEIQGYLSQIGTICCEFKEKECIEANPFFCPDPHKVEEIAELICALKERGDSIGAKITIMAKNLPVGLGEPVFDRLDADLAHALMSINAVKGLEVGEGFSFVNKLGSESRDEMTSSGFSTNYSGGILGGISSGQPLLVHLALKPTSSIAIPAKTINQQGETVEMTTSGRHDPCVGIRAVPIAESMLAIVLMDHLLRHRAQCGHF
SIO_010081: HDEF_RS02285
subclass of: SO_0000673
so part of: HDEF_RS02285
location: complement(463499..464563)
location: region:463499-464563:-1
so has part: feature:463499-464563:-1:exon

WP_012738170.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:463499-464563:-1:exon

HDEF_RS02290
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: mdh
locus tag: HDEF_RS02290
old locus tag: HDEF_0460
so part of: sequence
location: 464827..465765
location: region:464827-465765:1
so has part: feature:464827-465765:1:exon
subclass of: SO_0000010

66260355
type: Gene
SIO_000068: ncbigene

position:464827:1
position: 464827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:465765:1
position: 465765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:464827-465765:1:exon

HDEF_RS02290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: mdh
locus tag: HDEF_RS02290
old locus tag: HDEF_0460
EC number: 1.1.1.37
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000861594.1
GO function: GO:0030060 - L-malate dehydrogenase activity [Evidence IEA]
GO process: GO:0006099 - tricarboxylic acid cycle [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: malate dehydrogenase
translation: MKIVILGAAGGIGQGLALLLKAQLPVGSELALYDVNSITPGVAVDLSHIPTDVTVNGFSGKDPTLALLGADIVLIAAGIARKPGMARSDLFDVNAGIVRKLTEDIAHTCPKALVGIITNPVNSTVVISAETFKKAGVYNKNKLFGITTLDIIRARSFIAKLKNKVSENIKVPVIGGHSGVTILPLLSQIPDISLTESEIKTLTQSIQNAGTEVVKAKEGGGSATLSMAYAAALFCFSLVRALNGEKGIVEYAYVESDRKQYPRFFAQPVLLNENGIAEYKEIGALSAFEQKHLEKILDELNKDIGLAEQFNQ
SIO_010081: HDEF_RS02290
subclass of: SO_0000673
so part of: HDEF_RS02290
location: 464827..465765
location: region:464827-465765:1
so has part: feature:464827-465765:1:exon

WP_012738171.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:464827-465765:1:exon

HDEF_RS02295
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: clpS
locus tag: HDEF_RS02295
old locus tag: HDEF_0461
so part of: sequence
location: 465870..466187
location: region:465870-466187:1
so has part: feature:465870-466187:1:exon
subclass of: SO_0000010

66260356
type: Gene
SIO_000068: ncbigene

position:465870:1
position: 465870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:466187:1
position: 466187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:465870-466187:1:exon

HDEF_RS02295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: clpS
locus tag: HDEF_RS02295
old locus tag: HDEF_0461
inference: COORDINATES: similar to AA sequence:RefSeq:YP_005226092.1
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-dependent Clp protease adapter ClpS
translation: MNKNGGLNFEHLLNEQEISAVKPPDMYKVILNNDDYTPMEFVVDVLQNFFSYNLEQATALMLKVHYQGKAICGTFTAEVAETKVASVNQYARENEHPFLCTLEKA
SIO_010081: HDEF_RS02295
subclass of: SO_0000673
so part of: HDEF_RS02295
location: 465870..466187
location: region:465870-466187:1
so has part: feature:465870-466187:1:exon

WP_012738172.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:465870-466187:1:exon

HDEF_RS02300
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: clpA
locus tag: HDEF_RS02300
old locus tag: HDEF_0462
so part of: sequence
location: 466215..468503
location: region:466215-468503:1
so has part: feature:466215-468503:1:exon
subclass of: SO_0000010

66260357
type: Gene
SIO_000068: ncbigene

position:466215:1
position: 466215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:468503:1
position: 468503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:466215-468503:1:exon

HDEF_RS02300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: clpA
locus tag: HDEF_RS02300
old locus tag: HDEF_0462
EC number: 3.4.21.92
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857497.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
GO process: GO:0043335 - protein unfolding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-dependent Clp protease ATP-binding subunit ClpA
translation: MLNQELELTLNIAFATARRNRHEFMTLEHLLQALLTNTSAKETLEACHVDLLVLHKELEIFIEKTTPVFPLSDKECDVQPTLGFQRVLQRAVFHVQSSGRSEVSGANVLVALFSEKESQAVYLLRKHDVTRLDVVNFIAHGIRKDFSENKETTENSVIKDPGASSSSENIESALINLNHLAQSGHIDPLIGRAKELQRTVQVLCRRRKNNPLLVGESGVGKTAIAEGLAWKIVQENVPEIIKKCVLYSLDIGSLLAGTKYRGDFEKRFKALLKTLQEDENSILFIDEIHTIIGAGAASGGQIDVANLLKPFLSNGKIRVMGSTTYQEFSKIFEKDRALARRFQKIDIIEPTTEETIQIINGLKTKYEAHHDVRYTSKAVRAAVILSAKYINDRHLPDKAIDVIDEAGASSRLLPLSKRKKTVNVSDIESVVARIARIPEQAVSVNDKEVLKNLNDRLKMLVFGQDEAISMLTEAIKMSRAGLGNENKPVGAFLFAGPTGVGKTEVTLQLSKALDIELLRFDMSEYIEHHTVSRLIGAPPGYVGYEQGGLMTDAVIKHPYAVLLLDEIEKAHPDIFNLLLQVMDNGTLTDNNGRKADFRNIILVMTTNAGVRETERKSIGFTEQDHSPDAMLEVKKIFSPEFRNRLDNIIWFNGLSINVIQQVVDKFIVELQAQLDAKGVSLEVSDDARDWLAEKGYDKSMGARPMSRTIQEHIKKPLANELLFGALVEGGSVTVVLDKEKNQLLCQFCSTEELKTKKENVLH
SIO_010081: HDEF_RS02300
subclass of: SO_0000673
so part of: HDEF_RS02300
location: 466215..468503
location: region:466215-468503:1
so has part: feature:466215-468503:1:exon

WP_012738173.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:466215-468503:1:exon

HDEF_RS02305
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: infA
locus tag: HDEF_RS02305
old locus tag: HDEF_0463
so part of: sequence
location: complement(468599..468817)
location: region:468599-468817:-1
so has part: feature:468599-468817:-1:exon
subclass of: SO_0000010

66260358
type: Gene
SIO_000068: ncbigene

position:468599:-1
position: 468599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:468817:-1
position: 468817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:468599-468817:-1:exon

HDEF_RS02305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: infA
locus tag: HDEF_RS02305
old locus tag: HDEF_0463
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001040186.1
GO function: GO:0003743 - translation initiation factor activity [Evidence IEA]
GO process: GO:0006413 - translational initiation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: translation initiation factor IF-1
translation: MAKEDNIEMQGTVRDALPNAMFRVELENGHHVTAHISGKMRKNYIRILTGDKVTLELTPYDLSKARITFRSR
SIO_010081: HDEF_RS02305
subclass of: SO_0000673
so part of: HDEF_RS02305
location: complement(468599..468817)
location: region:468599-468817:-1
so has part: feature:468599-468817:-1:exon

WP_012738174.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:468599-468817:-1:exon

HDEF_RS02310
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS02310
old locus tag: HDEF_0465
so part of: sequence
location: 469129..469581
location: region:469129-469581:1
so has part: feature:469129-469581:1:exon
subclass of: SO_0000010

66260359
type: Gene
SIO_000068: ncbigene

position:469129:1
position: 469129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:469581:1
position: 469581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:469129-469581:1:exon

HDEF_RS02310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS02310
old locus tag: HDEF_0465
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012146395.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SRPBCC family protein
translation: MLGIHRSALIPFSADKMYKLINDVCAYPEFLPGCVGSKVINVTDNEMIAAVKIAKASIHKTFITRNTLMTNRSINIELIEGPFRALTGSWKLTALSPRACQIDFHLDFEFTNKLLALAFGGLFKDLGENMLEAFTKRAKVIYGVDERIAF
SIO_010081: HDEF_RS02310
subclass of: SO_0000673
so part of: HDEF_RS02310
location: 469129..469581
location: region:469129-469581:1
so has part: feature:469129-469581:1:exon

WP_012738176.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:469129-469581:1:exon

HDEF_RS02315
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: rplY
locus tag: HDEF_RS02315
old locus tag: HDEF_0466
so part of: sequence
location: 469702..470001
location: region:469702-470001:1
so has part: feature:469702-470001:1:exon
subclass of: SO_0000010

66260360
type: Gene
SIO_000068: ncbigene

position:469702:1
position: 469702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:470001:1
position: 470001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:469702-470001:1:exon

HDEF_RS02315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: rplY
locus tag: HDEF_RS02315
old locus tag: HDEF_0466
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857493.1
GO component: GO:0005840 - ribosome [Evidence IEA]
GO function: GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO process: GO:0006412 - translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: 50S ribosomal protein L25
translation: MIVINAKLRQKEEKGTAASRRFRKAGLFPATVYGGSLPPVSIVLDHDVVKNLEANPAFYNEILTLEVGEEKTKVKIQAIQRHPFKPKLTHMDFIRANEV
SIO_010081: HDEF_RS02315
subclass of: SO_0000673
so part of: HDEF_RS02315
location: 469702..470001
location: region:469702-470001:1
so has part: feature:469702-470001:1:exon

WP_012738177.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:469702-470001:1:exon

HDEF_RS02320
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: folB
locus tag: HDEF_RS02320
old locus tag: HDEF_0467
so part of: sequence
location: complement(469963..470361)
location: region:469963-470361:-1
so has part: feature:469963-470361:-1:exon
subclass of: SO_0000010

66260361
type: Gene
SIO_000068: ncbigene

position:469963:-1
position: 469963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:470361:-1
position: 470361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:469963-470361:-1:exon

HDEF_RS02320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: folB
locus tag: HDEF_RS02320
old locus tag: HDEF_0467
EC number: 4.1.2.25
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012738178.1
GO function: GO:0004150 - dihydroneopterin aldolase activity [Evidence IEA]
GO process: GO:0006760 - folic acid-containing compound metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: dihydroneopterin aldolase
translation: MDILFIEALRIFTLIGVHDWEKTLRQELIFDIKMGYENRKPASSDQVEDCLNYVDICDSVQQHVTRQRFELIERVAEEVADLLLQRFSSPWVWIKVSKPRAVSSAGNVGVIIERSKLATSSDFIRPYEIHMR
SIO_010081: HDEF_RS02320
subclass of: SO_0000673
so part of: HDEF_RS02320
location: complement(469963..470361)
location: region:469963-470361:-1
so has part: feature:469963-470361:-1:exon

WP_012738178.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:469963-470361:-1:exon

HDEF_RS02325
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS02325
old locus tag: HDEF_0469
so part of: sequence
location: 471070..472419
location: region:471070-472419:1
so has part: feature:471070-472419:1:exon
subclass of: SO_0000010

66260362
type: Gene
SIO_000068: ncbigene

position:471070:1
position: 471070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:472419:1
position: 472419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:471070-472419:1:exon

HDEF_RS02325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS02325
old locus tag: HDEF_0469
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFEGLIIKKPSEKAFESLQSVTNTTEPEAKRPSPKATSTEGKKRPPAVPEKTAKTAKTKKEYDRLKQKHEANLLSKSVAPELQKPVLPRATSTEGKKIPPSVPEKTGETKQKYKELKQKHEANLLSKSVAPERQKPPVPPRTRTKNKFLQDKLDEVARTGKLDCKGITDESLIHSALRKIRKAGLPIRTLDLSECHLTRFPTLLLEKDFNHISSLQLNDNPNLTQLPHNMDTLLPKLAHLNISRTGINPIDSVGIFRLLSTSHLFIIELDGTPVTADEYRDKMTSIFEQNKRLVGNTVKLSKDRSIKVFSSHCKSISSELRAQREGLLKSAPGVELIMPFSQSKGRFFIALPSGICSGISTAISLSVLADERVEGFLKKLYPDPSEGQRKGKINLPYVHELNELQSRVGTLRNVKQYLKERNIEYKILNRFKAEDAAENLKSTVAFLQN
SIO_010081: HDEF_RS02325
subclass of: SO_0000673
so part of: HDEF_RS02325
location: 471070..472419
location: region:471070-472419:1
so has part: feature:471070-472419:1:exon

WP_012738180.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:471070-472419:1:exon

HDEF_RS12390
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS12390
old locus tag: HDEF_0470
so part of: sequence
location: 472537..472698
location: region:472537-472698:1
so has part: feature:472537-472698:1:exon
subclass of: SO_0000010

66262052
type: Gene
SIO_000068: ncbigene

position:472537:1
position: 472537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:472698:1
position: 472698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:472537-472698:1:exon

HDEF_RS12390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS12390
old locus tag: HDEF_0470
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MYFAEPNIGIFRIWLKENSNQLNDFFLKYADSEYVTPEKFIVSEIKKAAAAST
SIO_010081: HDEF_RS12390
subclass of: SO_0000673
so part of: HDEF_RS12390
location: 472537..472698
location: region:472537-472698:1
so has part: feature:472537-472698:1:exon

WP_012738181.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:472537-472698:1:exon

HDEF_RS02330
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS02330
old locus tag: HDEF_0471
so part of: sequence
location: complement(472690..473202)
location: region:472690-473202:-1
so has part: feature:472690-473202:-1:exon
subclass of: SO_0000010

66260363
type: Gene
SIO_000068: ncbigene

position:472690:-1
position: 472690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:473202:-1
position: 473202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:472690-473202:-1:exon

HDEF_RS02330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS02330
old locus tag: HDEF_0471
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MITKPNMLMEITKSRQVVIKKDNSKIECFNTSLEEKNFLLLIRAEKAAQKTTDAKTKVMALVNSEKNRGMDKMQEGGVSTLAFIWAVIDNRKAREFKESFILPYLLQEMTQVLSTTLSADHLALKYGLSQRQVLNVIRWAQTSSDLTQAHPPILNKTDKARHNLMSVKSG
SIO_010081: HDEF_RS02330
subclass of: SO_0000673
so part of: HDEF_RS02330
location: complement(472690..473202)
location: region:472690-473202:-1
so has part: feature:472690-473202:-1:exon

WP_100103872.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:472690-473202:-1:exon

HDEF_RS02335
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS02335
old locus tag: HDEF_0472
so part of: sequence
location: 473235..474368
location: region:473235-474368:1
so has part: feature:473235-474368:1:exon
subclass of: SO_0000010

66260364
type: Gene
SIO_000068: ncbigene

position:473235:1
position: 473235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:474368:1
position: 474368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:473235-474368:1:exon

HDEF_RS02335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS02335
old locus tag: HDEF_0472
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016156579.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: multidrug effflux MFS transporter
translation: MQNINQPPLWLLILLIMFPQLVQTIYSPALPDIASSFRVSSEQAAQTLSVYFVSFAIGVVLWGWLSDRIGRRPAMMIGLTFYALGEALAIVAINFNMLLLARMVAALGAAAGSVLVQTMLRDSYKSTALARVFSIIGAALAVSPVFGLLSGGWLVSLYGHMGVFIALSSFSILLLVLTAIALPETRPENTIGHSMLSLAVRMARDSSFWRNAMLISLLNTMIFSYYSLAPFLFEQFGWDSRAFGWTGFLLMFSSLFGSLLNRKLLASNKHTEQLVRHACSLALLSGIAAWGLQSSPWILVPVVGVVVAYGIAIPNILSHALRQYSEQTGAAGALFGLVYYLLLALMLGLAGVVQQLGLVLTACAMIAWLYRPSSISH
SIO_010081: HDEF_RS02335
subclass of: SO_0000673
so part of: HDEF_RS02335
location: 473235..474368
location: region:473235-474368:1
so has part: feature:473235-474368:1:exon

WP_012738183.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:473235-474368:1:exon

HDEF_RS02340
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: uspA
locus tag: HDEF_RS02340
old locus tag: HDEF_0473
so part of: sequence
location: complement(474410..474859)
location: region:474410-474859:-1
so has part: feature:474410-474859:-1:exon
subclass of: SO_0000010

66260365
type: Gene
SIO_000068: ncbigene

position:474410:-1
position: 474410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:474859:-1
position: 474859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:474410-474859:-1:exon

HDEF_RS02340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: uspA
locus tag: HDEF_RS02340
old locus tag: HDEF_0473
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012738184.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: universal stress protein UspA
translation: MAYQHILIAVDLSEESQILLEKAVSMARPYHAKISLIHVDVNYTDLYTGLIDPPFGDVQKHIAEETKKKLTQLSQSTDYFITETLIGNGAFAEVLVDAVKKYEVDLVLCGHHQDFWSKLMSSTRQLLSVVHVDMLIVPLRKADITENQN
SIO_010081: HDEF_RS02340
subclass of: SO_0000673
so part of: HDEF_RS02340
location: complement(474410..474859)
location: region:474410-474859:-1
so has part: feature:474410-474859:-1:exon

WP_012738184.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:474410-474859:-1:exon

HDEF_RS02345
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: murI
locus tag: HDEF_RS02345
old locus tag: HDEF_0474
so part of: sequence
location: complement(474943..475761)
location: region:474943-475761:-1
so has part: feature:474943-475761:-1:exon
subclass of: SO_0000010

66260366
type: Gene
SIO_000068: ncbigene

position:474943:-1
position: 474943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:475761:-1
position: 475761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:474943-475761:-1:exon

HDEF_RS02345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: murI
locus tag: HDEF_RS02345
old locus tag: HDEF_0474
EC number: 5.1.1.3
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857480.1
GO function: GO:0008881 - glutamate racemase activity [Evidence IEA]
GO process: GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glutamate racemase
translation: MMTSQMNFYDRVSVLILDSGIGGLSVYQEMKKLLPHIHYIYCFDNEGFPYGEKSEIFILEQIVRIMTAIQKKHFLNCVIIACNTASTIVLPILRQRFSFPIIGAVPAIKPAAHITRNGVLGLLATPATIKRPYTLDLIKRFAKNCQVELLGSSELVYLAEKKVLGTEISINMFKKILQPWLNLQKVPDTIVLGCTHFPFIINELQQIFLNARMIHSGAAIAKRAFSLIGSQQNTSVHSFKNKAYCVKKNGDTESLSPILEKYGFSVLEELSL
SIO_010081: HDEF_RS02345
subclass of: SO_0000673
so part of: HDEF_RS02345
location: complement(474943..475761)
location: region:474943-475761:-1
so has part: feature:474943-475761:-1:exon

WP_234809436.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:474943-475761:-1:exon

HDEF_RS02355
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: orn
locus tag: HDEF_RS02355
old locus tag: HDEF_0476
so part of: sequence
location: complement(476099..476656)
location: region:476099-476656:-1
so has part: feature:476099-476656:-1:exon
subclass of: SO_0000010

66260367
type: Gene
SIO_000068: ncbigene

position:476099:-1
position: 476099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:476656:-1
position: 476656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:476099-476656:-1:exon

HDEF_RS02355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: orn
locus tag: HDEF_RS02355
old locus tag: HDEF_0476
EC number: 3.1.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012738187.1
GO function: GO:0000175 - 3'-5'-exoribonuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: oligoribonuclease
translation: MVKKSINHHQNLIWIDLEMTGLDPERDSIIEIATLVTDADLNILAEGPVIQIYQSDQQIALMNDWNICVHTKTGLIERVKNSLFSTADAESATLEFLRKWVPEGQSPICGNSVAQDRRFLYRYMPKLEAYFHYRYLDVSTLKELAARWKPEILPGFKKKNTHQALEDIRESVSELAYYREHFIQR
SIO_010081: HDEF_RS02355
subclass of: SO_0000673
so part of: HDEF_RS02355
location: complement(476099..476656)
location: region:476099-476656:-1
so has part: feature:476099-476656:-1:exon

WP_012738187.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:476099-476656:-1:exon

HDEF_RS02360
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: rsgA
locus tag: HDEF_RS02360
old locus tag: HDEF_0477
so part of: sequence
location: 476766..477824
location: region:476766-477824:1
so has part: feature:476766-477824:1:exon
subclass of: SO_0000010

66260368
type: Gene
SIO_000068: ncbigene

position:476766:1
position: 476766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:477824:1
position: 477824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:476766-477824:1:exon

HDEF_RS02360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: rsgA
locus tag: HDEF_RS02360
old locus tag: HDEF_0477
EC number: 3.6.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012738188.1
GO function: GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: small ribosomal subunit biogenesis GTPase RsgA
translation: MKKNKLSKNQHRRIQAHHQYRLHPTSLTDDKNNQLDDAQFGEPQQGVVISRFGQHADVEGHQGQQQRCHIRRNVLSLVTGDRVIWRPGIPRQENRNVKGIVEAVHERKSVLTRPDFYDGIKPMAANIDQIVIVSAVIPDLSLNMIDRYLVVSESLNIKPLLLLNKIDLLTPNERKKINLRLNIYRNIHYTVLEVSAQTGEGIADLQANLLDRVSIFSGQSGVGKSSLLNTLLPPTEQQILVEALSEKSALGQHTTTTSRLYHFQQGGDLIDSPGIREFGLWHLTQEQIIQGFIEFRDYVGHCKFRDCAHIDDPCCALRDAVQKGHIAKERFDNYHQILSEITLKGKKLFNQD
SIO_010081: HDEF_RS02360
subclass of: SO_0000673
so part of: HDEF_RS02360
location: 476766..477824
location: region:476766-477824:1
so has part: feature:476766-477824:1:exon

WP_012738188.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:476766-477824:1:exon

HDEF_RS02365
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: asd
locus tag: HDEF_RS02365
old locus tag: HDEF_0478
so part of: sequence
location: 477840..478706
location: region:477840-478706:1
so has part: feature:477840-478706:1:exon
subclass of: SO_0000010

66260369
type: Gene
SIO_000068: ncbigene

position:477840:1
position: 477840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:478706:1
position: 478706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:477840-478706:1:exon

HDEF_RS02365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: asd
locus tag: HDEF_RS02365
old locus tag: HDEF_0478
EC number: 4.1.1.65
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012738189.1
GO function: GO:0004609 - phosphatidylserine decarboxylase activity [Evidence IEA]
GO process: GO:0008654 - phospholipid biosynthetic process [Evidence IEA]
note: Phosphatidylserine decarboxylase is synthesized as a single chain precursor. Generation of the pyruvoyl active site from a Ser is coupled to cleavage of a Gly-Ser bond between the larger (beta) and smaller (alpha chains). It is an integral membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: archaetidylserine decarboxylase
translation: MLKKLKIKLQYLLPQHALTRLAGWAANKKAGWLTQQVIKIFASYYRVNIKEAQYTEFSAYSSFNEFFIRSLRSDVRPIAAGDNILVQPADGTISESGRIDKDKILQAKGHDYSLEALLAGQSLLAKEFENGQFVTTYLAPGDYHRVHMPCDGVLREMIYVPGSLFSVNAFFAENVPYLFARNERVICIFNTAFGTMAQILVGAMIVGSIETLWSGPVDSQRKGIIQRWVYPDEGSEAPIILKKGEEMGLFKLGSTVINLFVSNKIKLASHLQNGSITRLGEILGEAPH
SIO_010081: HDEF_RS02365
subclass of: SO_0000673
so part of: HDEF_RS02365
location: 477840..478706
location: region:477840-478706:1
so has part: feature:477840-478706:1:exon

WP_012738189.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:477840-478706:1:exon

HDEF_RS02370
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: mscM
locus tag: HDEF_RS02370
old locus tag: HDEF_0479
so part of: sequence
location: 479012..482329
location: region:479012-482329:1
so has part: feature:479012-482329:1:exon
subclass of: SO_0000010

66260370
type: Gene
SIO_000068: ncbigene

position:479012:1
position: 479012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:482329:1
position: 482329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:479012-482329:1:exon

HDEF_RS02370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: mscM
locus tag: HDEF_RS02370
old locus tag: HDEF_0479
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857485.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: miniconductance mechanosensitive channel MscM
translation: MLLLIGLLYSLTALPDPPRLNKIQIESFLKKVKSNQKLPHQKEIIQTLEASIDWLDATEISAKEAKKYQIVINNFESLIKNLQKQIEKEDEKPLSIEANLTIQELEQEVIKTNSQLIELTRQIQHEQEEFQQIFDLILKIPAEQSEIRRILSQITQQLQLKSNPLTPLEQAQLTLLKAEALAHRAKLNQLELAQLSSNNRQELSRMRIELYQKRHEHKDKLLEILQKNLNDQRYKNAEQALKRTELMAKECADLPVSISKNMETNRMLTDTLNEQAKRMNAISYQKRQIDSEILKVKQTLNAIREQVQWLSVSPALGETLITQVEKLPEKPKLQKLDQDMADLRLKRLNYEELLEQERKKMISIQEGGPSLASQQRCIFDAQMRHKSELLNLLISGYDSQILELTKIRLASNQLVDALNEVQEAVHRYLFWVPDINRVSFAYPIKTVKDLMQLLSLNTASQISGALMTMLNNQQTLLQTIGALLLVAFSIGSRRHYYAFLERTHNRVGKVNQDQFALTLRTVFWSIFIASPLPILWKIMGYGLQNAWSYPIAVSIGTAVTETVPVLWVFMISATFASPYGLFISHFRWHPDQVKRAMRFYRMLIWLIVPLMMAIITFQNYNDREFLSTLGRLCFILLCIALSLVTTSLKRAGVPLYLDKNGHCDNVLNHTLWRLLFFAPLIAAFASTLGYLATAQALLSRLETSVTIWFFLLIVYHIIRRWMLIQRRRIAFERAKQRRADILAQRARGEEENLYNNSESAIEIEEPVINLDLISAQSLRLVRFILTMIALISVITIWSDIHSAFGFLENIHLWKVASTINGVDNIQNITMGSLLVCIFFIIVTAQLVRNLPALLELVLLQHLDLTPGTGYAISTITKYLIMLAGGMIGFSFLGIEWGKLQWMAAALTVGLGFGLQEIFANFISGLIILFEKPIRIGDTVTIRNFTGTVTKINTRATTIFDWDKKEVIVPNKAFVTEQFVNWSLSDTITRVVLNIPAPANVNSQLIKSILLNACKCCPLSLTHPEPEAYLINLEQGIQIFELRVFASDITERMPLRHAIHQLILEGYQQHGIDLPFPPFQAKIDTFKHDEHAVFLNKNHIRKTGSL
SIO_010081: HDEF_RS02370
subclass of: SO_0000673
so part of: HDEF_RS02370
location: 479012..482329
location: region:479012-482329:1
so has part: feature:479012-482329:1:exon

WP_238526188.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:479012-482329:1:exon

HDEF_RS02375
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: epmA
locus tag: HDEF_RS02375
old locus tag: HDEF_0480
so part of: sequence
location: complement(482387..483364)
location: region:482387-483364:-1
so has part: feature:482387-483364:-1:exon
subclass of: SO_0000010

66260371
type: Gene
SIO_000068: ncbigene

position:482387:-1
position: 482387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:483364:-1
position: 483364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:482387-483364:-1:exon

HDEF_RS02375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: epmA
locus tag: HDEF_RS02375
old locus tag: HDEF_0480
EC number: 6.3.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002209139.1
GO function: GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]
GO process: GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: elongation factor P--(R)-beta-lysine ligase
translation: MSEAANWQPSAPISNLLKRADMIKKIRQFFTDRGVLEVDTPCMSQATVTDVHLSTFETRFLAPTMAKSLSLYMTTSPEYHMKRLLAAGSGPIYQMGRCFRNEEMGRYHNPEFTLLEWYRPHYDMYRLMDEVDDLLQQILTCHSAETLSYQQAFLRHLNIDPLSADETQIKEAAVRLNLASITDNEKDRDTFLQLLFMAGVEPYIGRDKPVFIYHFPASQAALASISTEDYRVAERFEVYFKGIELANGFYELTDSAEQQQRFEQDNRQRAALGLPKRSIDERFIAALKHGLPPCSGVALGIDRLVMLSVNAENLSEVMAFPVERA
SIO_010081: HDEF_RS02375
subclass of: SO_0000673
so part of: HDEF_RS02375
location: complement(482387..483364)
location: region:482387-483364:-1
so has part: feature:482387-483364:-1:exon

WP_012738191.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:482387-483364:-1:exon

HDEF_RS02380
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS02380
old locus tag: HDEF_0481
so part of: sequence
location: complement(483556..484557)
location: region:483556-484557:-1
so has part: feature:483556-484557:-1:exon
subclass of: SO_0000010

66260372
type: Gene
SIO_000068: ncbigene

position:483556:-1
position: 483556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:484557:-1
position: 484557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:483556-484557:-1:exon

HDEF_RS02380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS02380
old locus tag: HDEF_0481
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012738192.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
GO process: GO:0043107 - type IV pilus-dependent motility [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PilT/PilU family type 4a pilus ATPase
translation: MDFEKWIELGVKKKASDLHLCSAHYPRLRIDGELQVLEGYSRVDEKEIKMLSQTLLTEPKYLQLAEKGQLDFAFTQNKQRLRGHFFKQQYGISAAFRFIPESCPDFDVLNIPAIVQQLMRQENGLILITGATGSGKSTTLNAVISAMNQRYARHIIILEDPIEYLHRDGLGLIQQRDLSLHTCSANAALSATLRQDPDIILLSELRDLESIRLALTAAETGHLVLATLHTRTAAQAVDRLIDVFPAEDKSCVRGQLASSLIAVLAQKLVLKEGGGRIPLFEVLVRTPAVSHLIREGKIHQLEDVMHRGSQWGMQTFTQHKEQLQQEGSLAKNA
SIO_010081: HDEF_RS02380
subclass of: SO_0000673
so part of: HDEF_RS02380
location: complement(483556..484557)
location: region:483556-484557:-1
so has part: feature:483556-484557:-1:exon

WP_012738192.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:483556-484557:-1:exon

HDEF_RS02385
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS02385
old locus tag: HDEF_0482
so part of: sequence
location: 484578..485297
location: region:484578-485297:1
so has part: feature:484578-485297:1:exon
subclass of: SO_0000010

66260373
type: Gene
SIO_000068: ncbigene

position:484578:1
position: 484578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:485297:1
position: 485297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:484578-485297:1:exon

HDEF_RS02385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS02385
old locus tag: HDEF_0482
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857488.1
GO function: GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YggS family pyridoxal phosphate-dependent enzyme
translation: MNAIKQNIQNVKERILSDAQNCGRSPKEIQLLAVSKTRSVKLITEAIQAGQYAFGENYVQEGIEKIHYFSKNRMGNIKPQWHFIGPLQSNKTRSVAEYFDWCHTVDRFKLAERLSAQRPSNLPDLNVLIQVNISKEKTKSGVMLSELFDLASLISPLPKLKLCGLMAIPALIKDYHQQLVVFEEMHSAFLELKKEYPEWDILSLGMTNDMTAAIHAGSTLVRIGEGIFSHFEGKMNETS
SIO_010081: HDEF_RS02385
subclass of: SO_0000673
so part of: HDEF_RS02385
location: 484578..485297
location: region:484578-485297:1
so has part: feature:484578-485297:1:exon

WP_012738193.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:484578-485297:1:exon

HDEF_RS02390
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: proC
locus tag: HDEF_RS02390
old locus tag: HDEF_0483
so part of: sequence
location: 485284..486111
location: region:485284-486111:1
so has part: feature:485284-486111:1:exon
subclass of: SO_0000010

66260374
type: Gene
SIO_000068: ncbigene

position:485284:1
position: 485284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:486111:1
position: 486111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:485284-486111:1:exon

HDEF_RS02390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: proC
locus tag: HDEF_RS02390
old locus tag: HDEF_0483
EC number: 1.5.1.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857489.1
GO function: GO:0004735 - pyrroline-5-carboxylate reductase activity [Evidence IEA]
GO process: GO:0006561 - proline biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: pyrroline-5-carboxylate reductase
translation: MKHHKIVFIGSGNITSAIVSGIVENGYPSQKITVCAPSEGHRGVLAKKWGVISSADNAAAIRQGDVIIFSVKPQKIRELCQDLCDAKIDFSNKLILSVVTGISISRFCELLNTKLNLIRMMPNTPVRVHEGMTALFAAEEVNEADRHFTTELMCSVGKVCWLKNEADINKVIAVSASAPAYFFLFMEAIEREALLLGFSQERARLLVQQTARGVCALVEKSSALSLSELRQQVTSKGGTTEAAIEFFNKKQLFTIVSSAMKAAIAQAEFLEKNTF
SIO_010081: HDEF_RS02390
subclass of: SO_0000673
so part of: HDEF_RS02390
location: 485284..486111
location: region:485284-486111:1
so has part: feature:485284-486111:1:exon

WP_012738194.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:485284-486111:1:exon

HDEF_RS02395
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: ftnA
locus tag: HDEF_RS02395
old locus tag: HDEF_0484
so part of: sequence
location: complement(486533..487045)
location: region:486533-487045:-1
so has part: feature:486533-487045:-1:exon
subclass of: SO_0000010

66260375
type: Gene
SIO_000068: ncbigene

position:486533:-1
position: 486533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:487045:-1
position: 487045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:486533-487045:-1:exon

HDEF_RS02395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: ftnA
locus tag: HDEF_RS02395
old locus tag: HDEF_0484
EC number: 1.16.3.2
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857946.1
GO function: GO:0008199 - ferric iron binding [Evidence IEA]
GO process: GO:0006879 - cellular iron ion homeostasis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: non-heme ferritin
translation: MIKDSMVKKLNQQMNLEFDSASLYLQMSAWCSYKGFEGAAIFLKRHSQEEMQHMQRIFDYLCDIGQQPIVDSVKKPQNNFESLIDLFEKTYNNEKIVSMEINNLCDLALTEKDFPTFEFLQWYVSEQHEEEKLFKSILDKLNLVGSSGEGLFLVDKELKDINEKIEQHQV
SIO_010081: HDEF_RS02395
subclass of: SO_0000673
so part of: HDEF_RS02395
location: complement(486533..487045)
location: region:486533-487045:-1
so has part: feature:486533-487045:-1:exon

WP_012738195.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:486533-487045:-1:exon

HDEF_RS02400
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS02400
old locus tag: HDEF_0486
so part of: sequence
location: complement(487164..488663)
location: region:487164-488663:-1
so has part: feature:487164-488663:-1:exon
subclass of: SO_0000010

66260376
type: Gene
SIO_000068: ncbigene

position:487164:-1
position: 487164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:488663:-1
position: 488663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:487164-488663:-1:exon

HDEF_RS02400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS02400
old locus tag: HDEF_0486
inference: COORDINATES: protein motif:HMM:NF017870.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YdgA family protein
translation: MMKKSSLTISMFALLGAAWTGASWYTGKIIEEKMPALTDNINHKISSYLPRQDIKFTYQDYHRGIFSTKVRYVLQLNQDKTAEKIIFIETIDHGPFPISQIKKGYLLPVMASVHSTLENTPILEKIFTANQGESPLSADSRVSYLGNHTSVIHFSPINYEYQDTRLTFSGGMMTAHLSNDMNNADFTAQSDAFTFITQNDLKQTETLNLKGLTLSSVNHMGKFGVFLGEEKIAFKEILFNVNDKNNINLNGIEFYHKTNELDHALNTELNYSLDDLNIDGNDFGSGKLFVSLESIDGQTIKHFMEMIKNKTIKSLKAENNDEFLNTDQKDIIKNIWQAALKGNAVLKIEPLSWKNSQGEGTFNLQAQMKIPESTTTDPQNLSLASGIKKIDARLNIPVVMLKELMTQISILQGNSQEESQKLADQQVQSLAKLGKLLKFTTLENDIIGSQFYFENHQIDLNGQKFSSQSFSELFNMAGLLNSEQQTAPEIPSTITPANP
SIO_010081: HDEF_RS02400
subclass of: SO_0000673
so part of: HDEF_RS02400
location: complement(487164..488663)
location: region:487164-488663:-1
so has part: feature:487164-488663:-1:exon

WP_048901547.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:487164-488663:-1:exon

HDEF_RS02405
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: manA
locus tag: HDEF_RS02405
old locus tag: HDEF_0487
so part of: sequence
location: complement(488699..489880)
location: region:488699-489880:-1
so has part: feature:488699-489880:-1:exon
subclass of: SO_0000010

66260377
type: Gene
SIO_000068: ncbigene

position:488699:-1
position: 488699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:489880:-1
position: 489880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:488699-489880:-1:exon

HDEF_RS02405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: manA
locus tag: HDEF_RS02405
old locus tag: HDEF_0487
EC number: 5.3.1.8
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857945.1
GO function: GO:0004476 - mannose-6-phosphate isomerase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO process: GO:0009298 - GDP-mannose biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: mannose-6-phosphate isomerase
translation: MQKMINSVQNYAWGSRDALTRLYGIPNNQGLPMAELWMGAHPQNSSQLINDQKERQALCDLIQQNPAAYLGPQAQKGDQLPFLFKVLCAAQPLSLQVHPDKQAAQKGFAKENARRIPITAKERLYKDDNHKPELLYALTPFKAMNGFRTIEDLQRLFTPLVEAHPDIHLFVEKPSLKHLSNVFLSLLTMTDETKKRALAVLQSVVAGRSDEPWSTIQHIASSYPEDPGLFAPVFLNVITLKPREAMFLEAQTPHAYIEGVALEVMANSDNVLRAGLTEKWIDVPELMANVRFVPKPASNLLTLPLQRENRQIFPVPVSDFAFSVYQLKSDGQLLTPNIISIIFCMEGNARLDQKGKKLELIPGESCFCSAGESSIRVYGKGKIAYVSHPPINI
SIO_010081: HDEF_RS02405
subclass of: SO_0000673
so part of: HDEF_RS02405
location: complement(488699..489880)
location: region:488699-489880:-1
so has part: feature:488699-489880:-1:exon

WP_012738198.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:488699-489880:-1:exon

HDEF_RS02410
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: clpB
locus tag: HDEF_RS02410
old locus tag: HDEF_0488
so part of: sequence
location: 490036..492609
location: region:490036-492609:1
so has part: feature:490036-492609:1:exon
subclass of: SO_0000010

66260378
type: Gene
SIO_000068: ncbigene

position:490036:1
position: 490036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:492609:1
position: 492609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:490036-492609:1:exon

HDEF_RS02410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: clpB
locus tag: HDEF_RS02410
old locus tag: HDEF_0488
inference: COORDINATES: similar to AA sequence:RefSeq:NP_461591.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
GO process: GO:0042026 - protein refolding [Evidence IEA]; GO:0009408 - response to heat [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-dependent chaperone ClpB
translation: MNLDNFTNQFQSAFSEAQSLALGKNQQFIEPVHMMKALLNQDTGTVRPLLVATGVDINRLNAELDKALSDLPVVEGIGGDVRLSNASIRILNICNKLAQQRGDKYISSEWFILAALQERGALKEIMKSCGISEQPVKQEIERLRSGDNVNDQGAEDHRQALKKFTIDLTERAEQSKLDPVIGRDEEIRRAIQVLQRRTKNNPVLIGAPGVGKTAIVEGLAQRIVNGEVPEGLKKKRVLSLDMGALLAGAKYRGEFEERLKGVLKDLSKQGGSVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDPALERRFQKVYVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAASLSQRYIADRQLPDKAIDLIDEAAASIRMQIDSKPEALDKLERRIIQLKLEQQALNKEQDEASKKRLKMLNDELEKKERQYSELEEEWKAEKASLTGTQNIKAQLEEAKITLEQARRVSDLAKMSEMQYGKIPALEKQLQAATEKEMSSMKLLRNRVTDIEIAEVLARWTGIPVDRMLESEREKLLRMEENLHQQVIGQNEAVIAVSNALRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALAYFLFSSKDAMVRIDMSEFMEKHTVSRLLGAPPGYVGYEQGGYLTEAVRRRPYSVVLLDEVEKAHQDVFNILLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSDLIQERFSQADYSDMKKSVMEVVRRYFRPEFINRIDEVVVFHPLEAQHLESIAQIQLKQLYQRLEEKGYTAGITPSALGFLTKEGYDPVYGARPLKRAIQQEIENPLAQQILSGQLIPGMPIVLDLNEGHILARQ
SIO_010081: HDEF_RS02410
subclass of: SO_0000673
so part of: HDEF_RS02410
location: 490036..492609
location: region:490036-492609:1
so has part: feature:490036-492609:1:exon

WP_012738199.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:490036-492609:1:exon

HDEF_RS02415
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: tsaE
locus tag: HDEF_RS02415
old locus tag: HDEF_0489
so part of: sequence
location: 492859..493362
location: region:492859-493362:1
so has part: feature:492859-493362:1:exon
subclass of: SO_0000010

66260379
type: Gene
SIO_000068: ncbigene

position:492859:1
position: 492859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:493362:1
position: 493362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:492859-493362:1:exon

HDEF_RS02415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: tsaE
locus tag: HDEF_RS02415
old locus tag: HDEF_0489
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012738200.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0016887 - ATP hydrolysis activity [Evidence IEA]
GO process: GO:0006400 - tRNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE
translation: MKEHFLSLRDERATIKLGATLSAACHHAIVIALSGDLGAGKTTFSRGFIQASGYTGKVKSPTYTLVESYLLFPKTIHHFDLYRVSDPQELEWIGIRDYFNEQAICLIEWPDKGISVLPKADLELHFIYQGQKRDVQLVALSDQGVDSLKHFIDLLQNPKNDVTGILR
SIO_010081: HDEF_RS02415
subclass of: SO_0000673
so part of: HDEF_RS02415
location: 492859..493362
location: region:492859-493362:1
so has part: feature:492859-493362:1:exon

WP_012738200.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:492859-493362:1:exon

HDEF_RS02420
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS02420
old locus tag: HDEF_0491
pseudo: true
so part of: sequence
location: <493434..>494366
location: region:493434-494366:1
so has part: feature:493434-494366:1:exon
subclass of: SO_0000010

66260380
type: Gene
SIO_000068: ncbigene

position:493434:1
position: 493434
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:494366:1
position: 494366
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:493434-494366:1:exon

HDEF_RS02420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS02420
old locus tag: HDEF_0491
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012413447.1
GO function: GO:0008745 - N-acetylmuramoyl-L-alanine amidase activity [Evidence IEA]
GO process: GO:0009253 - peptidoglycan catabolic process [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: N-acetylmuramoyl-L-alanine amidase
SIO_010081: HDEF_RS02420
subclass of: SO_0000673
so part of: HDEF_RS02420
location: <493434..>494366
location: region:493434-494366:1
so has part: feature:493434-494366:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:493434-494366:1:exon

HDEF_RS02425
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: mutL
locus tag: HDEF_RS02425
old locus tag: HDEF_0492
so part of: sequence
location: 494435..496216
location: region:494435-496216:1
so has part: feature:494435-496216:1:exon
subclass of: SO_0000010

66260381
type: Gene
SIO_000068: ncbigene

position:494435:1
position: 494435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:496216:1
position: 496216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:494435-496216:1:exon

HDEF_RS02425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: mutL
locus tag: HDEF_RS02425
old locus tag: HDEF_0492
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857615.1
GO function: GO:0016887 - ATP hydrolysis activity [Evidence IEA]
GO process: GO:0006298 - mismatch repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA mismatch repair endonuclease MutL
translation: MPIKILSRELANQIAAGEVVERPSSVVKELVENSLDAGATKMEIDIHRGGIERIRIYDNGVGISKDELPLALARHATNKIFSLEDLQSILSMGFRGEALASISSVSRLKLTSRTLEQKEAWQAYTEGREMHVAIKPASHPVGTTIEVLNLFYNTPARRKFLRTEKTEWQHIDEVVRRLALSRFDVAIDLSHNGKLLRQYGVAQSELQKERRLLRLCGASFLQHALTLSLESTGLSVKGWIADPHSPKINDIQYFYINRRIVRDRVVNHAVRQAYETISTGSNTPSYVLYLDMDPRQVDVNVHPAKQEVRFHQTRLVHDFIYQAITTALNHSTSSFFAPPADIEKIAPIPKQNRSAAGSNHYAESDRALNKNRILTKQACEASLSFYEAAQTEQEKTPFKKEIVRDENPNYFGRVLSIFSSCYALIEYRNNIALLSLPEAERLLKKAFLTPPSERSRIQPMLIPLKFKLEKTEIMAWERHQNLLTLMGVELVIEKNSALLRGISLELRTHNLQKLIPELLAYLSKHETLLPEHLADWLASQFDALHHEWTVSQAIQLLTDFERFCVESIKDPSEKLLQLIDMQPALAMLTHGKN
SIO_010081: HDEF_RS02425
subclass of: SO_0000673
so part of: HDEF_RS02425
location: 494435..496216
location: region:494435-496216:1
so has part: feature:494435-496216:1:exon

WP_012738203.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:494435-496216:1:exon

HDEF_RS02430
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: miaA
locus tag: HDEF_RS02430
old locus tag: HDEF_0493
so part of: sequence
location: 496203..497144
location: region:496203-497144:1
so has part: feature:496203-497144:1:exon
subclass of: SO_0000010

66260382
type: Gene
SIO_000068: ncbigene

position:496203:1
position: 496203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:497144:1
position: 497144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:496203-497144:1:exon

HDEF_RS02430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: miaA
locus tag: HDEF_RS02430
old locus tag: HDEF_0493
EC number: 2.5.1.75
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857616.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0052381 - tRNA dimethylallyltransferase activity [Evidence IEA]
GO process: GO:0006400 - tRNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA
translation: MEKTEPITLPPAIFIMGPTTAGKTALAMDLSQYLPVELISVDSALIYRGMDIGTAKPTDEELRKTPHHLIDIRDPSESYSAACFQKDALKLMSEITLAGRIPLLVGGTMLYFKALLQGLSPLPSSDPNIRQDIQNQALKYGNTFLYEQLSVIDPVAAERIHFNDIQRVIRALEVFFISGKTLTELTKISGSRLPYKVYPFGLIPSSRAQLHHRIERRFQKMISAGFLEEVSSLFIRDDLSADLPSIRAVGYRQMWSYLSGEIDYNEMIYRGVCATRQLAKRQMTWLRQWKNLYWLDSDQPEAFLKKFKTLLKR
SIO_010081: HDEF_RS02430
subclass of: SO_0000673
so part of: HDEF_RS02430
location: 496203..497144
location: region:496203-497144:1
so has part: feature:496203-497144:1:exon

WP_012738204.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:496203-497144:1:exon

HDEF_RS02435
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: hfq
locus tag: HDEF_RS02435
old locus tag: HDEF_0494
so part of: sequence
location: 497297..497578
location: region:497297-497578:1
so has part: feature:497297-497578:1:exon
subclass of: SO_0000010

66260383
type: Gene
SIO_000068: ncbigene

position:497297:1
position: 497297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:497578:1
position: 497578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:497297-497578:1:exon

HDEF_RS02435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: hfq
locus tag: HDEF_RS02435
old locus tag: HDEF_0494
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012738205.1
GO function: GO:0003723 - RNA binding [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RNA chaperone Hfq
translation: MAKGQSLQDPFLNALRKERIPVSIYLINGIKLQGQIESFDQFVILLKSTSPSLKNTICQVIYKHAVSTVVPSRAVSSSPHHAPPLQKPEDDGS
SIO_010081: HDEF_RS02435
subclass of: SO_0000673
so part of: HDEF_RS02435
location: 497297..497578
location: region:497297-497578:1
so has part: feature:497297-497578:1:exon

WP_012738205.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:497297-497578:1:exon

HDEF_RS13470
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS13470
so part of: sequence
location: 497714..497839
location: region:497714-497839:1
so has part: feature:497714-497839:1:exon
subclass of: SO_0000010

78823910
type: Gene
SIO_000068: ncbigene

position:497714:1
position: 497714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:497839:1
position: 497839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:497714-497839:1:exon

HDEF_RS13470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS13470
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGRLRCRLHPLQAIENNGHEKTKHGYHDKTRMLMIECRRHL
SIO_010081: HDEF_RS13470
subclass of: SO_0000673
so part of: HDEF_RS13470
location: 497714..497839
location: region:497714-497839:1
so has part: feature:497714-497839:1:exon

WP_268802469.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:497714-497839:1:exon

HDEF_RS02440
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: hflK
locus tag: HDEF_RS02440
old locus tag: HDEF_0497
so part of: sequence
location: 498124..499356
location: region:498124-499356:1
so has part: feature:498124-499356:1:exon
subclass of: SO_0000010

66260384
type: Gene
SIO_000068: ncbigene

position:498124:1
position: 498124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:499356:1
position: 499356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:498124-499356:1:exon

HDEF_RS02440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: hflK
locus tag: HDEF_RS02440
old locus tag: HDEF_0497
EC number: 3.4.24.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012738208.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FtsH protease activity modulator HflK
translation: MAWNQPGNNGQDRDPWGSGGDKGSNKQNGRGKSSIDLNDLLRQLSQKLNTIAKGNSNNNKESKNSKLNPRFFIIVLLAVIVGWSASGFYTVKEAERGVVTRLGKLNHTVQPGLNWSPTFIDKVTPVNVESVRELAASGVMLTSDENVVRIEMNVQYRVTDPAAYLFSVTHPDDSLRQATDSAVRGVIGKYTMDKILTEGRTIVRSDTQRVLEETIRPYKMGITLLDVNFQAARPPEEVKAAFDDAIAARENEQQYIREAEAYANEVQPRANGKAQRLLEDAKAYKDRTVLEAQGEVAGFAKLLPEYKSAPQITRERLYIDTMENVLSHTKKILVNDKGNHLMVLPLDQILKGQITPDKKNINQIRNLNNLHSSSSSKNSLKKNSTNSGTENVAEQRMENAKRYSPVRVGR
SIO_010081: HDEF_RS02440
subclass of: SO_0000673
so part of: HDEF_RS02440
location: 498124..499356
location: region:498124-499356:1
so has part: feature:498124-499356:1:exon

WP_012738208.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:498124-499356:1:exon

HDEF_RS02445
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: hflC
locus tag: HDEF_RS02445
old locus tag: HDEF_0498
so part of: sequence
location: 499362..500351
location: region:499362-500351:1
so has part: feature:499362-500351:1:exon
subclass of: SO_0000010

66260385
type: Gene
SIO_000068: ncbigene

position:499362:1
position: 499362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:500351:1
position: 500351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:499362-500351:1:exon

HDEF_RS02445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: hflC
locus tag: HDEF_RS02445
old locus tag: HDEF_0498
EC number: 3.4.24.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857620.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: protease modulator HflC
translation: MRNSFLFMIFGALILFFASVFVVQEGQRGIVLRFGKVLRDADKKPLVYVPGLHLKIPLIEKVKTLDARIQTMDNQADRFVTKEKKDLIVDSYLKWRISDFSRYYLATGGGDVSQAEVLLKRKFSDRLRSEIGRLDVKDIVTDSRGKLTSDVRHALNTGTTDDETAKTSADDAIASAAALVEKETQGKQKVTVNPNSMAALGIAVVDVRIKQINLPTEVSDAIFQRMRAEREAVARRHRSQGQEEAEKLRATADYEVTRTLAEAERQARITRGEGDATAARLFADAFSKDPDFYSFIRSLRAYENSFNSTDVMILNPDSDFFRYMKAPKN
SIO_010081: HDEF_RS02445
subclass of: SO_0000673
so part of: HDEF_RS02445
location: 499362..500351
location: region:499362-500351:1
so has part: feature:499362-500351:1:exon

WP_012738209.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:499362-500351:1:exon

HDEF_RS02450
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: rimI
locus tag: HDEF_RS02450
old locus tag: HDEF_0499
so part of: sequence
location: complement(500402..500848)
location: region:500402-500848:-1
so has part: feature:500402-500848:-1:exon
subclass of: SO_0000010

66260386
type: Gene
SIO_000068: ncbigene

position:500402:-1
position: 500402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:500848:-1
position: 500848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:500402-500848:-1:exon

HDEF_RS02450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: rimI
locus tag: HDEF_RS02450
old locus tag: HDEF_0499
EC number: 2.3.1.266
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012908733.1
GO function: GO:0008080 - N-acetyltransferase activity [Evidence IEA]
GO process: GO:0006474 - N-terminal protein amino acid acetylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribosomal protein S18-alanine N-acetyltransferase
translation: MKQISILTAVDLPMAYQIEKRSHTFPWSEHIFTSSQGKLYFNIKLHIQKEMLGFAITQIVLDEATLFNLAVDPFYQRQGCGSFLMEYLIDYLRGFEVKNLWLEVRISNLKAIRLYEKFGFNEVSIKKEYYPKNNGREDALIMALPLLL
SIO_010081: HDEF_RS02450
subclass of: SO_0000673
so part of: HDEF_RS02450
location: complement(500402..500848)
location: region:500402-500848:-1
so has part: feature:500402-500848:-1:exon

WP_086934972.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:500402-500848:-1:exon

HDEF_RS02455
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS02455
old locus tag: HDEF_0500
so part of: sequence
location: complement(500793..501230)
location: region:500793-501230:-1
so has part: feature:500793-501230:-1:exon
subclass of: SO_0000010

66260387
type: Gene
SIO_000068: ncbigene

position:500793:-1
position: 500793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:501230:-1
position: 501230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:500793-501230:-1:exon

HDEF_RS02455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS02455
old locus tag: HDEF_0500
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004723205.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA polymerase III subunit psi
translation: MMSNRDRLLQQLGITQWVLKHPSVFQGEMFLQLTENIRFIIVGDPLPAYDNDLIKDVLQALRLEPNQVYFLMPFQLKMFPKNTRCHSWRLGVRESLSLIGVQLYSPKWDDFYQNGKAKHALWKQICDHETDFYFNCGRSADGISN
SIO_010081: HDEF_RS02455
subclass of: SO_0000673
so part of: HDEF_RS02455
location: complement(500793..501230)
location: region:500793-501230:-1
so has part: feature:500793-501230:-1:exon

WP_171770494.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:500793-501230:-1:exon

HDEF_RS02460
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: nuoN
locus tag: HDEF_RS02460
old locus tag: HDEF_0502
so part of: sequence
location: 501562..503055
location: region:501562-503055:1
so has part: feature:501562-503055:1:exon
subclass of: SO_0000010

66260388
type: Gene
SIO_000068: ncbigene

position:501562:1
position: 501562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:503055:1
position: 503055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:501562-503055:1:exon

HDEF_RS02460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: nuoN
locus tag: HDEF_RS02460
old locus tag: HDEF_0502
EC number: 1.6.5.9
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857896.1
GO function: GO:0008137 - NADH dehydrogenase (ubiquinone) activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NADH-quinone oxidoreductase subunit NuoN
translation: MITSSQSALSGEMLMAMLPILIVAGTVVLLMLSIAWRRHHFFNGSLTVIGLNCALFSLYTVWGLFHFSQHDAINVTPLLRINGYSIFYSGLVILASLATCTFAYPWLQGYPDNREEFYLLLLISTLGALVLVSAQHLAAVFLGIELIALPLFGLLGYAYQQNRSLEASIKYFVLSAAASSFLLFGMAMLYAQTGGLSFTSLGNVFNEHVFSKPLILAGMGMILVGFGFKLSLVPFQLWTPDVYQGAPAPVTTFLGTVGKIALLAGVMRFFLYVPTFNVPGLNTALSFMAVASIFFGNLMALTQNNIKRLLGYSSIAHFGYLMIGLIALHQDPMVLERVAVYIVAYLFSSLGVLGVVSLMSSPYKGADAEALFSYRGLFWHRPILAAVMTIMLLSLAGIPMTLGFIAKFFLLLTAVNTHLWVLTATVVIGSAIALYYYLRITVSLFLSPPETLQRDTPKDWAFTAGGIVVWISALLVLVFGIYPQPLISFIKGFNALS
SIO_010081: HDEF_RS02460
subclass of: SO_0000673
so part of: HDEF_RS02460
location: 501562..503055
location: region:501562-503055:1
so has part: feature:501562-503055:1:exon

WP_012738213.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:501562-503055:1:exon

HDEF_RS02465
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS02465
old locus tag: HDEF_0503
so part of: sequence
location: complement(503161..503394)
location: region:503161-503394:-1
so has part: feature:503161-503394:-1:exon
subclass of: SO_0000010

66260389
type: Gene
SIO_000068: ncbigene

position:503161:-1
position: 503161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:503394:-1
position: 503394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:503161-503394:-1:exon

HDEF_RS02465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS02465
old locus tag: HDEF_0503
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005272441.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKVSVIAQCLINEKSFNEMSEAESRIKQIFGLQYADHSFDEWNTEVSLLSAKRFISVVANSSKVRIRALIQELWHY
SIO_010081: HDEF_RS02465
subclass of: SO_0000673
so part of: HDEF_RS02465
location: complement(503161..503394)
location: region:503161-503394:-1
so has part: feature:503161-503394:-1:exon

WP_012738214.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:503161-503394:-1:exon

HDEF_RS02470
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: priA
locus tag: HDEF_RS02470
old locus tag: HDEF_0504
so part of: sequence
location: 503688..505892
location: region:503688-505892:1
so has part: feature:503688-505892:1:exon
subclass of: SO_0000010

66260390
type: Gene
SIO_000068: ncbigene

position:503688:1
position: 503688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:505892:1
position: 505892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:503688-505892:1:exon

HDEF_RS02470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: priA
locus tag: HDEF_RS02470
old locus tag: HDEF_0504
EC number: 3.6.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005175847.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: primosomal protein N'
translation: MLIVKIALPIPLNRTFDYCLAMNMPHPAIGARVKVPFGHRKAIGIVTSLSQSSAVSLEKLKNIEAILDDQSLFSDSLWQTLYWASQYYHYSIGEVLFHAIPLLLREGKQAKFEPVLHWVATEKGQTISIDALHKAPKQQKAMNQLLQGPIYHHEVNSLGFTQNTFQALQKKGLSLLCAQEIQSSDWRSKIKKMKGENRLQLNSEQIEAIKRIHHQNKQFVVWLLAGVTGSGKTEVYLRVLENLLIEGRQALVLVPEIGLTPQIVDRFRERFDVPIDVLHSGLNHKQRLSVWLKARSGEVAIVIGTRSALFTPFAQLGIIVIDEEHDGSYKQQEGWCYQARDLAVFRAKKENIPIVMGSATPALETLRNVELGKYQKLVLSQKAVQTQLVKQKFIDIKGLPLTSGLCQPLLKKMQQHLQANNQVMLFLNRRGYAPVLLCHECGWIAECLHCDHYYTLHQNSQKLRCHHCNRQSQLLSQCPRCDSTHLMPVGVGTEQLESTLLSLFPNVPITRIDRDTTRKKGVLEKYLSHIHEGGARILIGTQMLSKGHHFSDVTLVGLLDVDGALFSSDFRAAERFSQLYIQVAGRAGRAKKAGEIFLQTHHPEHPLLQTLLGKGYDAFAKEALEERKKALLPPYTYHIIIRSQDNDNEQAPIFLQRVRDIFESDSLKDTDLWVMGPVPALFSKRNGRFQWQLLLQHPSRKQLQQLVNRCNPLLLSLALNQKIRWSLDVDPTES
SIO_010081: HDEF_RS02470
subclass of: SO_0000673
so part of: HDEF_RS02470
location: 503688..505892
location: region:503688-505892:1
so has part: feature:503688-505892:1:exon

WP_012738215.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:503688-505892:1:exon

HDEF_RS02475
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: mscL
locus tag: HDEF_RS02475
old locus tag: HDEF_0505
so part of: sequence
location: 506072..506524
location: region:506072-506524:1
so has part: feature:506072-506524:1:exon
subclass of: SO_0000010

66260391
type: Gene
SIO_000068: ncbigene

position:506072:1
position: 506072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:506524:1
position: 506524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:506072-506524:1:exon

HDEF_RS02475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: mscL
locus tag: HDEF_RS02475
old locus tag: HDEF_0505
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005174607.1
GO function: GO:0008381 - mechanosensitive monoatomic ion channel activity [Evidence IEA]
GO process: GO:0034220 - monoatomic ion transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: large-conductance mechanosensitive channel protein MscL
translation: MSFIKEFREFAMRGNVADLAIGVIIGSAFGKVVSSLVADIIMPPIGLLIGGVDLKQFSFVLREARNDVPAVIMNYGSFLQSLVDCIIVTLAIFSVIKFMNKLRRELEGILESRAEINKEKTEVGTQVEPPAPQEILLMEIRDLLKKSTKK
SIO_010081: HDEF_RS02475
subclass of: SO_0000673
so part of: HDEF_RS02475
location: 506072..506524
location: region:506072-506524:1
so has part: feature:506072-506524:1:exon

WP_012738216.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:506072-506524:1:exon

HDEF_RS02480
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: metK
locus tag: HDEF_RS02480
old locus tag: HDEF_0506
so part of: sequence
location: 507011..508168
location: region:507011-508168:1
so has part: feature:507011-508168:1:exon
subclass of: SO_0000010

66260392
type: Gene
SIO_000068: ncbigene

position:507011:1
position: 507011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:508168:1
position: 508168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:507011-508168:1:exon

HDEF_RS02480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: metK
locus tag: HDEF_RS02480
old locus tag: HDEF_0506
EC number: 2.5.1.6
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857370.1
GO function: GO:0004478 - methionine adenosyltransferase activity [Evidence IEA]
GO process: GO:0006556 - S-adenosylmethionine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: methionine adenosyltransferase
translation: MPHQLFTSESVSEGHPDKIADQISDAVLDAILIQDPKARVACETYVKTGMVIVGGEITTSAWVDIEEITRCTLAEIGYVHSDMGFDAHSCAVLSAIGKQSPDINQGVDRIDPLDQGAGDQGMMFGYATNETDVLMPAPITYSHRLVKRQSEMRKIGQLPWLRPDAKSQITFKYDKGYAVAIDTIVFSTQHEEDVTQKQLEEAVMEEIIKPVIPTQWLSSSTKYFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQISYAIGVANPTSIMLETFGTEKITIQKIMSLIHQHFDLRPYGLIKMLDLLKPIYRATAAYGHFGRDVFPWEATDKAELLREQAGLNQ
SIO_010081: HDEF_RS02480
subclass of: SO_0000673
so part of: HDEF_RS02480
location: 507011..508168
location: region:507011-508168:1
so has part: feature:507011-508168:1:exon

WP_012738217.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:507011-508168:1:exon

HDEF_RS02485
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: pyrE
locus tag: HDEF_RS02485
old locus tag: HDEF_0508
so part of: sequence
location: complement(508290..508946)
location: region:508290-508946:-1
so has part: feature:508290-508946:-1:exon
subclass of: SO_0000010

66260393
type: Gene
SIO_000068: ncbigene

position:508290:-1
position: 508290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:508946:-1
position: 508946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:508290-508946:-1:exon

HDEF_RS02485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: pyrE
locus tag: HDEF_RS02485
old locus tag: HDEF_0508
EC number: 2.4.2.10
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012738219.1
GO function: GO:0004588 - orotate phosphoribosyltransferase activity [Evidence IEA]
GO process: GO:0009220 - pyrimidine ribonucleotide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: orotate phosphoribosyltransferase
translation: MKKYKAQFIEFMLDRKILTFGEFILKSGRVSPYFFNAGLFNKGSDLIKLGRFYADALIDSGIECDLLFGPAYKGIPITITTAMALYANHHLDLTYCFNRKEIKDHGEGGGLVGGALQGKVLLVDDVITAGTAIRESVEIIHAHSASLAGILVALDRQERGNGTLSAIEEIEQKYQSKVISIVTLEDMIHFLKNEKTMIEAFSALNKYAEQYGVLRKNL
SIO_010081: HDEF_RS02485
subclass of: SO_0000673
so part of: HDEF_RS02485
location: complement(508290..508946)
location: region:508290-508946:-1
so has part: feature:508290-508946:-1:exon

WP_012738219.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:508290-508946:-1:exon

HDEF_RS02490
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: rph
locus tag: HDEF_RS02490
old locus tag: HDEF_0509
so part of: sequence
location: complement(508981..509706)
location: region:508981-509706:-1
so has part: feature:508981-509706:-1:exon
subclass of: SO_0000010

66260394
type: Gene
SIO_000068: ncbigene

position:508981:-1
position: 508981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:509706:-1
position: 509706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:508981-509706:-1:exon

HDEF_RS02490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: rph
locus tag: HDEF_RS02490
old locus tag: HDEF_0509
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012738220.1
GO function: GO:0004549 - tRNA-specific ribonuclease activity [Evidence IEA]
GO process: GO:0008033 - tRNA processing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribonuclease PH
translation: MRPSGRTAQQLRPLTFTRHYTKYAEGAVLVEFGETRVLCTATVEEGVPRFLKGQNKGWITAEYSMLPRSTHQRHARESVKGKQGGRTLEIQRLIARALRAAVDLTKLGEFTIKLDCDVLQADGGTRTAAITGACVALQDALQKMRVEGKLKSNPMKGLVAAVSVGVVGGESICDLEYIEDAIAETDMNVVMIEEGAGRKIIEIQGTAEGAPFSHQQLLELLALADDGIKTIFQAQKKVLEK
SIO_010081: HDEF_RS02490
subclass of: SO_0000673
so part of: HDEF_RS02490
location: complement(508981..509706)
location: region:508981-509706:-1
so has part: feature:508981-509706:-1:exon

WP_012738220.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:508981-509706:-1:exon

HDEF_RS02495
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS02495
old locus tag: HDEF_0510
so part of: sequence
location: 509843..510706
location: region:509843-510706:1
so has part: feature:509843-510706:1:exon
subclass of: SO_0000010

66260395
type: Gene
SIO_000068: ncbigene

position:509843:1
position: 509843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:510706:1
position: 510706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:509843-510706:1:exon

HDEF_RS02495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS02495
old locus tag: HDEF_0510
EC number: 3.1.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005122606.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YicC/YloC family endoribonuclease
translation: MIRSMTAYARYDHKSEYGDLVWELRAVNHRYLDIYIRLPDTFRRLESVFREKIRSRVTRGKIECHLSFKANENTQNELRLNRALAKQLINVLSWVKEQSKITTFNAFDLLQWPGVMISEDLPLEDISYELLAGLEHVLNDFMVSREKEGAGLKEFIKQRLKAMSAEIVKIRDHMPSIVESERERLQNKFEELKIQLDPNRLEQELMLVAQRMDTTEELDRLELHIKEIENILNHQDVVGRRLDFMVQECHRESNTLASKSINIEVTSSAVELKVLIEQIREQVQNIE
SIO_010081: HDEF_RS02495
subclass of: SO_0000673
so part of: HDEF_RS02495
location: 509843..510706
location: region:509843-510706:1
so has part: feature:509843-510706:1:exon

WP_012738221.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:509843-510706:1:exon

HDEF_RS02500
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: speD
locus tag: HDEF_RS02500
old locus tag: HDEF_0511
so part of: sequence
location: complement(510800..511594)
location: region:510800-511594:-1
so has part: feature:510800-511594:-1:exon
subclass of: SO_0000010

66260396
type: Gene
SIO_000068: ncbigene

position:510800:-1
position: 510800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:511594:-1
position: 511594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:510800-511594:-1:exon

HDEF_RS02500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: speD
locus tag: HDEF_RS02500
old locus tag: HDEF_0511
EC number: 4.1.1.50
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011094847.1
GO function: GO:0004014 - adenosylmethionine decarboxylase activity [Evidence IEA]
GO process: GO:0008295 - spermidine biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: adenosylmethionine decarboxylase
translation: MNKLKLHGFNNLTKSLGFCIYDICYAQTFADRDGYIAYIDDEYNADRLTEILRETCSIIGANILNIARQDYNPQGASVTILISEEAIDPRDVDTSEHPGPLPDSIVAHLDKSHICVHTYPESHPTEGLCTFRADIEVSTCGIISPLNALNYLIHQLESDIVTIDYRVRGFTRDVNGVKHYIDHQINSIQNFMCKDIQSLYHMMDVNVYQENIFHTKMMLKDFDLKHYLFNSHPEQLSVQEKDLITKRLYKEMQEIYYGRNVVEV
SIO_010081: HDEF_RS02500
subclass of: SO_0000673
so part of: HDEF_RS02500
location: complement(510800..511594)
location: region:510800-511594:-1
so has part: feature:510800-511594:-1:exon

WP_012738222.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:510800-511594:-1:exon

HDEF_RS02505
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: speE
locus tag: HDEF_RS02505
old locus tag: HDEF_0512
so part of: sequence
location: complement(511668..512540)
location: region:511668-512540:-1
so has part: feature:511668-512540:-1:exon
subclass of: SO_0000010

66260397
type: Gene
SIO_000068: ncbigene

position:511668:-1
position: 511668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:512540:-1
position: 512540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:511668-512540:-1:exon

HDEF_RS02505
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: speE
locus tag: HDEF_RS02505
old locus tag: HDEF_0512
EC number: 2.5.1.16
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012738223.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: polyamine aminopropyltransferase
translation: MSQKQLWYEKLHSSFGQYFSIKEVLYRDKTDHQDLIIFDTEEFGRVMALNHVVQTTERDEFIYHEMMTHVPLLAHGDAKKVLIIGGGDGGILREVCRHAGVKEIIMVEIDQDVVNLCQEYFPHHHAGAYDDPRFQLKIDDGAHFVEQTNHRFDLIISDSTDPIGPGEHLFKSSFYQACRRILNAGGLFVAQNGVCFLQQTEVINTYQRLMPYFSDVSFYQAAIPTYYGGIMTFAWASENANLRRIGLNDLESRFADSGLKSCRYYNPFVHFASFALPQYLIEALAKKAPK
SIO_010081: HDEF_RS02505
subclass of: SO_0000673
so part of: HDEF_RS02505
location: complement(511668..512540)
location: region:511668-512540:-1
so has part: feature:511668-512540:-1:exon

WP_012738223.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:511668-512540:-1:exon

HDEF_RS02510
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: tsaB
locus tag: HDEF_RS02510
old locus tag: HDEF_0513
so part of: sequence
location: 512705..513394
location: region:512705-513394:1
so has part: feature:512705-513394:1:exon
subclass of: SO_0000010

66260398
type: Gene
SIO_000068: ncbigene

position:512705:1
position: 512705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:513394:1
position: 513394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:512705-513394:1:exon

HDEF_RS02510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: tsaB
locus tag: HDEF_RS02510
old locus tag: HDEF_0513
EC number: 2.3.1.234
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012738224.1
GO function: GO:0003725 - double-stranded RNA binding [Evidence IEA]
GO process: GO:0006400 - tRNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB
translation: MPPKILAIDTTTDACSVALLNHGEISSLSEICPRNQTQRILPMVQQILGASSLSLHQLDVLAFARGPGSFTGVRLGIGVSQGLALGADLPMIGISTLEMLAQGACRQTGLKQVLVAMDARMGEIYWGAFIQKSASQWQSVEKEMLKTPKQAERQIRLLKGKWAYAGNAWTIYPDLLKVNSEVLTQADLLLPQAEDMLPLALKLWQAGVAVPVEQAEPVYLRNNVAQKAR
SIO_010081: HDEF_RS02510
subclass of: SO_0000673
so part of: HDEF_RS02510
location: 512705..513394
location: region:512705-513394:1
so has part: feature:512705-513394:1:exon

WP_012738224.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:512705-513394:1:exon

HDEF_RS02515
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS02515
old locus tag: HDEF_0514
so part of: sequence
location: 513398..514996
location: region:513398-514996:1
so has part: feature:513398-514996:1:exon
subclass of: SO_0000010

66260399
type: Gene
SIO_000068: ncbigene

position:513398:1
position: 513398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:514996:1
position: 514996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:513398-514996:1:exon

HDEF_RS02515
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS02515
old locus tag: HDEF_0514
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857377.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: family 10 glycosylhydrolase
translation: MKWCHWWLFVFIFLITACSNLKKVGSEKNRHFRASWVASVINLDWPSKTSTEIFSEQERILVQKKELIQILDQAVKMRMNAIILQVKPEADALYASDILPWSSYLTGTLGKNPGYDPLAFAVQEAHKRNLELHAWINPYRVSMNTAKNTIDQLNRLLPDRKKSVYKSHPEWIRIAYDRFVLDPGIPEVRDWIKNIIKEIVIRYDIDAIHLDDYFYYETPTSKLNDHETYLQYFNNFNNKADWRRKNTYLLIKSLSEEIHRLKPQVKFGISPTGVWRNKKQDPLGSETGVLSTHYDQNFSDTVLWVKEKLIDYIVPQVYWSFDRKVARYDVIASWWAYLLENKNTHLYIGNAFYKAGVPSELEPSWAENGGALEIERQLHFNENTSGIKGSILFRHLSLNDPLKKNAANMIKNPLWSMPVLIPSMPWKGSSVPPESPIKIKKIITSKGIELTWKAGDKPGDKSHQNLTLYYAIYKRSKNTWGLLSHYQLLKTVRKTGLYETWLDPSPFSHKSDVYIISALNRNHNESLGRIFD
SIO_010081: HDEF_RS02515
subclass of: SO_0000673
so part of: HDEF_RS02515
location: 513398..514996
location: region:513398-514996:1
so has part: feature:513398-514996:1:exon

WP_012738225.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:513398-514996:1:exon

HDEF_RS02520
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: rnd
locus tag: HDEF_RS02520
old locus tag: HDEF_0515
so part of: sequence
location: 515022..516152
location: region:515022-516152:1
so has part: feature:515022-516152:1:exon
subclass of: SO_0000010

66260400
type: Gene
SIO_000068: ncbigene

position:515022:1
position: 515022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:516152:1
position: 516152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:515022-516152:1:exon

HDEF_RS02520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: rnd
locus tag: HDEF_RS02520
old locus tag: HDEF_0515
EC number: 3.1.13.5
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002211181.1
GO function: GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0033890 - ribonuclease D activity [Evidence IEA]
GO process: GO:0008033 - tRNA processing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribonuclease D
translation: MNYRLITTNEDLHHICELAVLRKAVALDTEFVRTKTYYAELGLIQLYDGHRVSLIDPFLITEWAPFYCLLKNKKIVKFLHSAGEDIEIFFHFFKTLPEPLIDSQILAAFTGRPVSCGFSILVKEFQGIVLNKAESRTDWLARPLSQKQCDYAAEDVFYLLPLANALMKKIETSGWMEAVKEECELLCQRRSQIQDPEMAYRDIGNASQLNPGQLICLKKLASWRLVYARKKNVAINFVIQESYLWKVARYQPTSLSELFHLGLDRRTIRQHGLTLLGLVTESQKTKEDPSLVIAYLNHEPVYKKIFKEIKDLIQSIGALIGLSHELIGSRKHINQLLNWHFGLIPKEKRPLLLTGWRAQVLSLELTKILDRHPMMI
SIO_010081: HDEF_RS02520
subclass of: SO_0000673
so part of: HDEF_RS02520
location: 515022..516152
location: region:515022-516152:1
so has part: feature:515022-516152:1:exon

WP_044612447.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:515022-516152:1:exon

HDEF_RS02525
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: rfaQ
locus tag: HDEF_RS02525
old locus tag: HDEF_0516
so part of: sequence
location: complement(516181..517269)
location: region:516181-517269:-1
so has part: feature:516181-517269:-1:exon
subclass of: SO_0000010

66260401
type: Gene
SIO_000068: ncbigene

position:516181:-1
position: 516181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:517269:-1
position: 517269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:516181-517269:-1:exon

HDEF_RS02525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: rfaQ
locus tag: HDEF_RS02525
old locus tag: HDEF_0516
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012738227.1
GO function: GO:0016757 - glycosyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: putative lipopolysaccharide heptosyltransferase III
translation: MVNMVVKKNNFERILVIKLRHFGDVLLITPLLTTLQQHAPNAKIDVLLYSGTEKILSKYKTLHHIWTIDRQLKHAGIKAQILGEWALFQSLKKQNYSLILNLSDQWRSAFYCRFLKPELSIGFHYAKRDNALWCSCYDHLVPVSNHVKQHTVINNLSILNPLKLSKIITQVSMSYGSDDIFYVEKILHERSLSDYILIHPFARWHFKTWQASCFSKLINYLTAQKEKIVITGGPEKTEQDYVLNVIEDCSQKEDIVNLVGLLSFSQLAVLIERAQIFIGVDSVAMHMAAALKTPSVVLFGPSNLKQWSPWEAPHTLLWAGDHRKLPLPEEVDTRTCDRYLDAIPLKKVIDAVDFWRTQRKVR
SIO_010081: HDEF_RS02525
subclass of: SO_0000673
so part of: HDEF_RS02525
location: complement(516181..517269)
location: region:516181-517269:-1
so has part: feature:516181-517269:-1:exon

WP_012738227.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:516181-517269:-1:exon

HDEF_RS02530
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: tusA
locus tag: HDEF_RS02530
old locus tag: HDEF_0517
so part of: sequence
location: 517372..517623
location: region:517372-517623:1
so has part: feature:517372-517623:1:exon
subclass of: SO_0000010

66260402
type: Gene
SIO_000068: ncbigene

position:517372:1
position: 517372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:517623:1
position: 517623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:517372-517623:1:exon

HDEF_RS02530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: tusA
locus tag: HDEF_RS02530
old locus tag: HDEF_0517
EC number: 2.8.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012738228.1
GO function: GO:0097163 - sulfur carrier activity [Evidence IEA]
GO process: GO:0002143 - tRNA wobble position uridine thiolation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sulfurtransferase TusA
translation: MKDPLNHYDHFLDTLGLRCPEPLMMLRKTARDLTIGQTLLMISDDPSTLSDIPAFCRFMGHHLSAKKADRIPYQYLIVIGCLE
SIO_010081: HDEF_RS02530
subclass of: SO_0000673
so part of: HDEF_RS02530
location: 517372..517623
location: region:517372-517623:1
so has part: feature:517372-517623:1:exon

WP_012738228.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:517372-517623:1:exon

HDEF_RS12395
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS12395
old locus tag: HDEF_0518
so part of: sequence
location: 517810..517983
location: region:517810-517983:1
so has part: feature:517810-517983:1:exon
subclass of: SO_0000010

66262053
type: Gene
SIO_000068: ncbigene

position:517810:1
position: 517810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:517983:1
position: 517983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:517810-517983:1:exon

HDEF_RS12395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS12395
old locus tag: HDEF_0518
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTTPQTRHMSFSQNLLLNDRLYKNVKKIHTQHDQNHQLNPGLSVQYLIEQRQHGPFG
SIO_010081: HDEF_RS12395
subclass of: SO_0000673
so part of: HDEF_RS12395
location: 517810..517983
location: region:517810-517983:1
so has part: feature:517810-517983:1:exon

WP_012738229.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:517810-517983:1:exon

HDEF_RS02535
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS02535
old locus tag: HDEF_0519
so part of: sequence
location: 518032..518250
location: region:518032-518250:1
so has part: feature:518032-518250:1:exon
subclass of: SO_0000010

66260403
type: Gene
SIO_000068: ncbigene

position:518032:1
position: 518032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:518250:1
position: 518250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:518032-518250:1:exon

HDEF_RS02535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS02535
old locus tag: HDEF_0519
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDQLKSFMDNYFFESEIKENESIEYTRFSEVDTEGYEETWKNSRQREKVFVVDTLMKKKERSFSIKTSRRAF
SIO_010081: HDEF_RS02535
subclass of: SO_0000673
so part of: HDEF_RS02535
location: 518032..518250
location: region:518032-518250:1
so has part: feature:518032-518250:1:exon

WP_012738230.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:518032-518250:1:exon

HDEF_RS02540
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS02540
old locus tag: HDEF_0520
so part of: sequence
location: 518508..518738
location: region:518508-518738:1
so has part: feature:518508-518738:1:exon
subclass of: SO_0000010

66260404
type: Gene
SIO_000068: ncbigene

position:518508:1
position: 518508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:518738:1
position: 518738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:518508-518738:1:exon

HDEF_RS02540
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS02540
old locus tag: HDEF_0520
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857381.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVLYDIGFDELLFREVREDIYLTLTDTHFSQTFSIKMKKGVAAPEEKIFTREEKYFLDDLLKTALSSFDSADQKNN
SIO_010081: HDEF_RS02540
subclass of: SO_0000673
so part of: HDEF_RS02540
location: 518508..518738
location: region:518508-518738:1
so has part: feature:518508-518738:1:exon

WP_012738231.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:518508-518738:1:exon

HDEF_RS02545
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS02545
so part of: sequence
location: complement(519112..519339)
location: region:519112-519339:-1
so has part: feature:519112-519339:-1:exon
subclass of: SO_0000010

66260405
type: Gene
SIO_000068: ncbigene

position:519112:-1
position: 519112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:519339:-1
position: 519339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:519112-519339:-1:exon

HDEF_RS02545
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS02545
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKKFLQFITPGFFLCLSFSIHASSLASPEKITRDDPLLCEKCCKVTKYPQTFPLCVEDVEDTKNWCVDFLNYELP
SIO_010081: HDEF_RS02545
subclass of: SO_0000673
so part of: HDEF_RS02545
location: complement(519112..519339)
location: region:519112-519339:-1
so has part: feature:519112-519339:-1:exon

WP_044612250.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:519112-519339:-1:exon

HDEF_RS02550
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS02550
old locus tag: HDEF_0524
so part of: sequence
location: complement(519851..521221)
location: region:519851-521221:-1
so has part: feature:519851-521221:-1:exon
subclass of: SO_0000010

66260406
type: Gene
SIO_000068: ncbigene

position:519851:-1
position: 519851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:521221:-1
position: 521221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:519851-521221:-1:exon

HDEF_RS02550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS02550
old locus tag: HDEF_0524
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857383.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MFS transporter
translation: MNDNKMTASELRGTWGLGTVFSLRMLGMFMVLPVMTTYGMTLPDATSTLVGVAIGIYGLTQAFFQIPFGLISDRIGRKFMIVGGLILFSLGSLLAAFSQSIWGIIIGRALQGSGAIASSIMALLSDLTREQHRTKAMACIGVSFGISFAIAMILGPMITHAFGLHFLFGIIAFLSLLGIVITLTVVPSTDRHVLNRESGMVKSSITKVLNNRRLLKLNFGIMCLHMLLMLTFVALPSALERAGLPAVNHWILYLVTMLISFAAVLPIILYAEMKRRIRSVLILCVTVLLIAEVILWSSNKHLWSIISGVQCFFVVFNVMEALLPSLISKEAPAGYKGTAMGVYATSQFIGVAIGGCLGGWLFDMKGTSAVFAACALVAFIWLIVSTTMREPSYVSSLRILLSRRVLEDSDLLNRIKAQAGVTEVLLVKEEQSAYIKVDTKKTNRRQLEELIHLGKS
SIO_010081: HDEF_RS02550
subclass of: SO_0000673
so part of: HDEF_RS02550
location: complement(519851..521221)
location: region:519851-521221:-1
so has part: feature:519851-521221:-1:exon

WP_044612448.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:519851-521221:-1:exon

HDEF_RS02555
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS02555
old locus tag: HDEF_0525
so part of: sequence
location: 521530..522927
location: region:521530-522927:1
so has part: feature:521530-522927:1:exon
subclass of: SO_0000010

66260407
type: Gene
SIO_000068: ncbigene

position:521530:1
position: 521530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:522927:1
position: 522927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:521530-522927:1:exon

HDEF_RS02555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS02555
old locus tag: HDEF_0525
EC number: 3.4.24.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004715732.1
GO function: GO:0004222 - metalloendopeptidase activity [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: M48 family metalloprotease
translation: MSVSPKPTAEDSLPDMGTTAGATLSIAQEIEIGDFYLREMHSHAPFIYDPLLNQYIHSLGKKLVDHAQSVKTPFHFYLLNNNQINASAFLGGNVVVNSGLFFYTDNESELASVLAHEISHITQRHLARAIENNQRLSQLTLTSKLGSLLLFLANPKAGVVAWNSSLALAQQDILSLSQSNEQEADRIGLKLLQASGFNAHAMTDFLEKLADESRYTSKPPEMLLTHPLPESRLVDIYNRANQISRHPVVSSQDYLFAKVRLHGLFELKKNFNEFLKPLKKGTASERLAAEYGQAILWYQNKKYDKARQILQTLSVTYPDNIWFLDLMTDIDLSQNKAAQAITRLKKARVAKQHQLIWQLNLANAYIKAGESAQAVSLLRRYTFEHPNDMNGWDLLIKAALAKRWRDQALAAHAENAALKGDFSQAIGLLSDASNLVPLGSLQQARYDARIDQLRQLEQRFKKYQK
SIO_010081: HDEF_RS02555
subclass of: SO_0000673
so part of: HDEF_RS02555
location: 521530..522927
location: region:521530-522927:1
so has part: feature:521530-522927:1:exon

WP_100103948.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:521530-522927:1:exon

HDEF_RS02560
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: nadB
locus tag: HDEF_RS02560
old locus tag: HDEF_0526
so part of: sequence
location: complement(523009..524619)
location: region:523009-524619:-1
so has part: feature:523009-524619:-1:exon
subclass of: SO_0000010

66260408
type: Gene
SIO_000068: ncbigene

position:523009:-1
position: 523009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:524619:-1
position: 524619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:523009-524619:-1:exon

HDEF_RS02560
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: nadB
locus tag: HDEF_RS02560
old locus tag: HDEF_0526
EC number: 1.4.3.16
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009636996.1
GO function: GO:0008734 - L-aspartate oxidase activity [Evidence IEA]
GO process: GO:0009435 - NAD biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: L-aspartate oxidase
translation: MKKLSEQMTDVLIIGSGAAGLSLALRLAPHCRITLLSKELLNEGATFYAQGGIAAVFDEADSISSHVQDTVISGSGLCDQEIVEFVASHASQCIQWLVHQGVLFDTEINSIGQERYHLAREGGHTHRRILHSADATGKEVENTLIKKVLDHPNICIRERHNAVDLITSGKMGNTENQRIVGAYVWNRDSKQVETFRSKIVVLATGGAAKVYQYTTNPEISSGDGIAMAWRAGCRVANLEFNQFHPTCLFHPKAPNFLLTEALRGEGAYLKRPDGSRLMPDFDARLELAPRDIVARAIDHEMKRLGADCMYLDISHKSSEFIVQHFPMIYQKLLSLGINLTKEPIPVVPAAHYTCGGVMVNRQGRTDLEGLYAIGEVSYTGLHGANRMASNSLLECLVYAWSAAEDILAHLPQSHLSDVLPDWDESRVHNSDEQVVIQHNWHELRLFMWDYMGIVRTTKRLERALRRINTLKQEVNEYYTHFRISNHLLELRNLLQTAELMVRCAMMRKESRGLHYTLDYPNQLQKPQLSILSPLKG
SIO_010081: HDEF_RS02560
subclass of: SO_0000673
so part of: HDEF_RS02560
location: complement(523009..524619)
location: region:523009-524619:-1
so has part: feature:523009-524619:-1:exon

WP_012738237.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:523009-524619:-1:exon

HDEF_RS02565
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: rpoE
locus tag: HDEF_RS02565
old locus tag: HDEF_0527
so part of: sequence
location: 524784..525359
location: region:524784-525359:1
so has part: feature:524784-525359:1:exon
subclass of: SO_0000010

66260409
type: Gene
SIO_000068: ncbigene

position:524784:1
position: 524784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:525359:1
position: 525359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:524784-525359:1:exon

HDEF_RS02565
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: rpoE
locus tag: HDEF_RS02565
old locus tag: HDEF_0527
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005070454.1
GO component: GO:0005737 - cytoplasm [Evidence IEA]
GO function: GO:0016987 - sigma factor activity [Evidence IEA]
GO process: GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0006979 - response to oxidative stress [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RNA polymerase sigma factor RpoE
translation: MTERLTDQALVERVQSGDQQSFNLLVIRYQHKVAKIASRYIPSSDVPDVVQESFIKAYRALKLFRGESAFYTWLYRIVINTAKNHLIAQGRHPPANDVDADDIKNDENITALKEISNPESLLLSEELRQAIFNALELLPEDLRVTITLRELEGLSYEEIANIMNCPVGTVRSRIFRARDAIDNKIQPLIQR
SIO_010081: HDEF_RS02565
subclass of: SO_0000673
so part of: HDEF_RS02565
location: 524784..525359
location: region:524784-525359:1
so has part: feature:524784-525359:1:exon

WP_012738238.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:524784-525359:1:exon

HDEF_RS02570
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS02570
old locus tag: HDEF_0528
so part of: sequence
location: 525385..525990
location: region:525385-525990:1
so has part: feature:525385-525990:1:exon
subclass of: SO_0000010

66260410
type: Gene
SIO_000068: ncbigene

position:525385:1
position: 525385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:525990:1
position: 525990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:525385-525990:1:exon

HDEF_RS02570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS02570
old locus tag: HDEF_0528
inference: COORDINATES: protein motif:HMM:NF015810.2
GO function: GO:0016989 - sigma factor antagonist activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RseA family anti-sigma factor
translation: MQKEKLSALIDDEILDDELLHLLSKDKVLQKSWQNYHLIGDALRHDLANPLCLDMSDRILEVIKNDPICINTSAPAIETSRDTDDIPFWQKIRPWVSQLTQIAVAASVSLVVVLSGHYQSSDQSELPTFNISPMIELKPAPVSFGLHSNVGTHAGKSHHMKKPSEEEQNASEEFNLLHKFELKRRTSLPLEPHPPLPESYN
SIO_010081: HDEF_RS02570
subclass of: SO_0000673
so part of: HDEF_RS02570
location: 525385..525990
location: region:525385-525990:1
so has part: feature:525385-525990:1:exon

WP_012738239.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:525385-525990:1:exon

HDEF_RS02575
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS02575
old locus tag: HDEF_0529
so part of: sequence
location: 526014..526967
location: region:526014-526967:1
so has part: feature:526014-526967:1:exon
subclass of: SO_0000010

66260411
type: Gene
SIO_000068: ncbigene

position:526014:1
position: 526014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:526967:1
position: 526967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:526014-526967:1:exon

HDEF_RS02575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS02575
old locus tag: HDEF_0529
inference: COORDINATES: protein motif:HMM:NF015825.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MucB/RseB C-terminal domain-containing protein
translation: MHPFLLFVILLIAALSPNSAGSEQPNAGMMLQEMSTAIRSLNYEFNYIQADEQDIDSLRYRHVILNGKTFAQLLRMDQLRVEVRQNNDQISYFQSDLTPFTLLGTHIVDAFPSVVFSDFSMLSQYYHYIFVGKMRIADRICQIIRVLPKENNRYSYFIWLDEVTKLPMQINLLNLNGQTLEQFKVISLNMDDNLTSFVQNLKAPVPPLMKLPEEETVNFDWFPKWLPAGFVDIPPNEHQLMHKKKFLASRFYTDGLFSFLITVSPVNKKNNTESHFQQSRRTIQTQVRDHIQMTVVGEIPLSTAKRIADNLILKINK
SIO_010081: HDEF_RS02575
subclass of: SO_0000673
so part of: HDEF_RS02575
location: 526014..526967
location: region:526014-526967:1
so has part: feature:526014-526967:1:exon

WP_015873108.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:526014-526967:1:exon

HDEF_RS02580
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: lepA
locus tag: HDEF_RS02580
old locus tag: HDEF_0530
so part of: sequence
location: 526964..528763
location: region:526964-528763:1
so has part: feature:526964-528763:1:exon
subclass of: SO_0000010

66260412
type: Gene
SIO_000068: ncbigene

position:526964:1
position: 526964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:528763:1
position: 528763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:526964-528763:1:exon

HDEF_RS02580
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: lepA
locus tag: HDEF_RS02580
old locus tag: HDEF_0530
EC number: 3.6.5.n1
inference: COORDINATES: similar to AA sequence:RefSeq:NP_311462.1
GO function: GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: translation elongation factor 4
translation: MNYKRNFSIIAHIDHGKSTLSDRIIQLCGGLTEREMASQVLDSMDLERERGITIKAQSVTLYYQAQDGNTYQLNFIDTPGHVDFSYEVSRSLAACEGALLVVDAAQGVEAQTLANCYTALEMNLEVVPVLNKIDLPASDPDRIAEEIEDIVGIDATDAVRCSAKTGIGIADVLERLVRDIPAPKGDPKGTLQALIIDSWFDNYLGVVSLIRLKNGTLRKGDKVKVMSTGQIYNVERLGIFTPKRFDTDILNCGEVGWLVCAIKDILGAPVGDTLTLSRHPAEKPLPGFKKVKPQVYAGLFPISSDDYESFRDALAKLSLNDASLFFEPENSGALGFGFRCGFLGLLHMEIVQERLEREYHLDLITTAPTVVYEVKTVKKEILYVDSPSKLPALSEIEELREPIAECHILLPQEYLGNVMTLCVAKRGVQVNMVYHGHQVALTYHIPMAEVVLDFFDRLKSTSRGYASLDYNFKRFQASDMVRVDILLNTERVDALALITHRDNAASRGRELVEKMKDFIPRQQFDIAIQAAIGHHIIARATVKQLRKNVLAKCYGGDVSRKKKLLQKQKEGKKRMKRVGNVELPQDAFLAILHIGKESK
SIO_010081: HDEF_RS02580
subclass of: SO_0000673
so part of: HDEF_RS02580
location: 526964..528763
location: region:526964-528763:1
so has part: feature:526964-528763:1:exon

WP_015873109.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:526964-528763:1:exon

HDEF_RS02585
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: lepB
locus tag: HDEF_RS02585
old locus tag: HDEF_0531
so part of: sequence
location: 528805..529755
location: region:528805-529755:1
so has part: feature:528805-529755:1:exon
subclass of: SO_0000010

66260413
type: Gene
SIO_000068: ncbigene

position:528805:1
position: 528805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:529755:1
position: 529755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:528805-529755:1:exon

HDEF_RS02585
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: lepB
locus tag: HDEF_RS02585
old locus tag: HDEF_0531
EC number: 3.4.21.89
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006706966.1
GO function: GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO process: GO:0006465 - signal peptide processing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: signal peptidase I
translation: MANTFTLILALATLLTGIIWCIERFIWAPARQKKNVAISTETASDVIQQPCWIETAVSIFPVLLIVFCVRSFVYEPYQIPSGSMMPTLLIGDFILVEKYAYGIKDPITQTTLIPTGHPKRGDVVVFKYPLDKKVDFIKRVIGLPGDHVRYDPVRKEVHVQPSCQPDNDCDHQVMTYSTAQPSNFVQTFVFNRDKNTSTAFLQIPLQQSVPDNGIRQNERIETAGSVSHPILILPGTADQMRSYYRQQGQPIGSWVVPHGEYFMMGDNRDNSADSRFWGFVPERNLVGKATAIWMSFEKQENEWPTGVRLSRIGSID
SIO_010081: HDEF_RS02585
subclass of: SO_0000673
so part of: HDEF_RS02585
location: 528805..529755
location: region:528805-529755:1
so has part: feature:528805-529755:1:exon

WP_015873110.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:528805-529755:1:exon

HDEF_RS02590
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: rnc
locus tag: HDEF_RS02590
old locus tag: HDEF_0532
so part of: sequence
location: 529835..530515
location: region:529835-530515:1
so has part: feature:529835-530515:1:exon
subclass of: SO_0000010

66260414
type: Gene
SIO_000068: ncbigene

position:529835:1
position: 529835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:530515:1
position: 530515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:529835-530515:1:exon

HDEF_RS02590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: rnc
locus tag: HDEF_RS02590
old locus tag: HDEF_0532
EC number: 3.1.26.3
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015960048.1
GO function: GO:0004525 - ribonuclease III activity [Evidence IEA]
GO process: GO:0006396 - RNA processing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribonuclease III
translation: MNSININSLELKLRYSFKERSLLLQALTHRSLHTQHNERLEFLGDSILSFVIANQLYHRFPEINEGNMSRMRATLVRGDTLTEIAREFDIGAYLQLGQGELKTGGAQRESILADSIEAIIGAIFLDSDIQTVEKTILRWYHKRLEQINPTHHQKDPKTRLQEYMQSHQLPLPFYLLAQVCGEAHDQEFTIHCQVSGLEELVVGKGSNRRKAEQEAAEKTLKKLEFE
SIO_010081: HDEF_RS02590
subclass of: SO_0000673
so part of: HDEF_RS02590
location: 529835..530515
location: region:529835-530515:1
so has part: feature:529835-530515:1:exon

WP_015873111.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:529835-530515:1:exon

HDEF_RS02595
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: era
locus tag: HDEF_RS02595
old locus tag: HDEF_0533
so part of: sequence
location: 530512..531459
location: region:530512-531459:1
so has part: feature:530512-531459:1:exon
subclass of: SO_0000010

66260415
type: Gene
SIO_000068: ncbigene

position:530512:1
position: 530512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:531459:1
position: 531459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:530512-531459:1:exon

HDEF_RS02595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: era
locus tag: HDEF_RS02595
old locus tag: HDEF_0533
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857408.1
GO function: GO:0005525 - GTP binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: GTPase Era
translation: MKLIQDEQKKTENTYCGFISILGRPNVGKSTLLNQLLGQKISITSSKAQTTRHRIMGIHTQGSYQAIYIDTPGLHIEEKRTINRFMNRAARSAIGNVELIIFMVEGTHWFPDDEMIVNKLRGVTCPVLLAVNKIDHVTDKSILLPHIAFLKRKLSFLDVRFFDLVPISAKKRIQIDRIEQIVRQHLPEAPHHFSEDHITDRSERFMASEIIREKLMRFLGEELPYSVTVEIEKFEVNVRGAYHIHGLIIVEREGQKKIVIGHRGSKIKTMGIEARQNMQQLFGTKVHLELWVKVKSGWADDERALRSLGYRDDLR
SIO_010081: HDEF_RS02595
subclass of: SO_0000673
so part of: HDEF_RS02595
location: 530512..531459
location: region:530512-531459:1
so has part: feature:530512-531459:1:exon

WP_015873112.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:530512-531459:1:exon

HDEF_RS02600
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: recO
locus tag: HDEF_RS02600
old locus tag: HDEF_0534
so part of: sequence
location: 531472..532176
location: region:531472-532176:1
so has part: feature:531472-532176:1:exon
subclass of: SO_0000010

66260416
type: Gene
SIO_000068: ncbigene

position:531472:1
position: 531472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:532176:1
position: 532176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:531472-532176:1:exon

HDEF_RS02600
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: recO
locus tag: HDEF_RS02600
old locus tag: HDEF_0534
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015873113.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA repair protein RecO
translation: MHHHWHRSFILHRRSYSETSLILDLLTENEGRISLIAKGALRPRSALKGYLQPFTPLLLRWSGKSAIKTLCGAEPISIAVPLTGIFLYSGLYVNELLSRLLLPNIDYRALFFDYLDCLEALASAQDTSERALRRFELALLTHLGYGVDFLHCVETGEPVVAQMTYRYQHEIGFIRSPEDDSLGFTGHQLQSLAKGAFYDQETLKAAKRFTRIALKPHLGHRPLNSRSLFRKFNL
SIO_010081: HDEF_RS02600
subclass of: SO_0000673
so part of: HDEF_RS02600
location: 531472..532176
location: region:531472-532176:1
so has part: feature:531472-532176:1:exon

WP_015873113.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:531472-532176:1:exon

HDEF_RS02605
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: mscS
locus tag: HDEF_RS02605
old locus tag: HDEF_0535
so part of: sequence
location: 532274..533125
location: region:532274-533125:1
so has part: feature:532274-533125:1:exon
subclass of: SO_0000010

66260417
type: Gene
SIO_000068: ncbigene

position:532274:1
position: 532274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:533125:1
position: 533125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:532274-533125:1:exon

HDEF_RS02605
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: mscS
locus tag: HDEF_RS02605
old locus tag: HDEF_0535
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002209961.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: small-conductance mechanosensitive channel MscS
translation: MEELDVVNRIHNAGSWVIDNRDLLIEYAINIVAVVLIMITGSIVARVVSKTLNKMMKNRSIDATVSDFLSTMVRYSILAFTIIAVLGRLGVQTASVIAVIGAAGLAVGLALQGSLSNFAAGVLLVAFRPPFREGEFVDLGSVSGTVLHVQLFSTTLRSPDAKIIVVPNGKIIAGNIINITREPERRTEIIVGVSYDADIDVVKKVLGEVIAADQRILADKEVIVRLHEMAASSLNFVVRVWTLNADAWPVYWDLMENFKRALDTHQIGIPYPQMDVHLHQIKK
SIO_010081: HDEF_RS02605
subclass of: SO_0000673
so part of: HDEF_RS02605
location: 532274..533125
location: region:532274-533125:1
so has part: feature:532274-533125:1:exon

WP_015873114.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:532274-533125:1:exon

HDEF_RS02610
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS02610
old locus tag: HDEF_0536
pseudo: true
so part of: sequence
location: 533167..533891
location: region:533167-533891:1
so has part: feature:533167-533891:1:exon
subclass of: SO_0000010

66260418
type: Gene
SIO_000068: ncbigene

position:533167:1
position: 533167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:533891:1
position: 533891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:533167-533891:1:exon

HDEF_RS02610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS02610
old locus tag: HDEF_0536
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857406.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: oxidative stress defense protein
SIO_010081: HDEF_RS02610
subclass of: SO_0000673
so part of: HDEF_RS02610
location: 533167..533891
location: region:533167-533891:1
so has part: feature:533167-533891:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:533167-533891:1:exon

HDEF_RS02615
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS02615
old locus tag: HDEF_0537
so part of: sequence
location: complement(533888..534814)
location: region:533888-534814:-1
so has part: feature:533888-534814:-1:exon
subclass of: SO_0000010

66260419
type: Gene
SIO_000068: ncbigene

position:533888:-1
position: 533888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:534814:-1
position: 534814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:533888-534814:-1:exon

HDEF_RS02615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS02615
old locus tag: HDEF_0537
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857405.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: LPS O-antigen length regulator
translation: MSDQKIQNVLCHQKKHSNMSENTLDLKPSTDEIDLIDLLAIFFKNKVKIFFITIFFVIVSALICYKLPEKWTSKAIITYIDDNQLQPFELLSYKLKLFDISLNFDQKNLLSLFIQLFNSNVLKEKYLVNTSYFQKLIKDHPENRNQFMLDIIKNIHIEYSKSNKENDFKGYVFYTLSYSADTAKDAQNLLNGYINYISAIFDEKLNNKITNKINIKKSVLSFIIDNKGMSINDDVNLPMAKLQLEKLQSIKLSDIKIIPFEYLQKPNEPVKKDSPQSAFIILLSGMAGLMVSMFYVLVQHYLSQRNKP
SIO_010081: HDEF_RS02615
subclass of: SO_0000673
so part of: HDEF_RS02615
location: complement(533888..534814)
location: region:533888-534814:-1
so has part: feature:533888-534814:-1:exon

WP_015873115.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:533888-534814:-1:exon

HDEF_RS02620
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
locus tag: HDEF_RS02620
old locus tag: HDEF_0538
so part of: sequence
location: complement(534870..536036)
location: region:534870-536036:-1
so has part: feature:534870-536036:-1:exon
subclass of: SO_0000010

66260420
type: Gene
SIO_000068: ncbigene

position:534870:-1
position: 534870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:536036:-1
position: 536036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:534870-536036:-1:exon

HDEF_RS02620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
locus tag: HDEF_RS02620
old locus tag: HDEF_0538
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014657221.1
GO function: GO:0051287 - NAD binding [Evidence IEA]; GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]; GO:0003979 - UDP-glucose 6-dehydrogenase activity [Evidence IEA]
GO process: GO:0000271 - polysaccharide biosynthetic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nucleotide sugar dehydrogenase
translation: MKIAVVGTGYVGLSNAILLSQHNEVVTLDLVPEKVDLINAKQSPIADGDIEHFLKHKTLNLRATLNKEEAYKAADFVIIATPTDYDAKTYCFNTESVEEVIDDVSRCYPKAVMVIKSTVPVGFTSKIKAQFACDNIIFCPEFLREGKALHDNLYPSRVIVGERSRRAEIFANLLKQGAVKKDIETLFTDATEAEAIKLFANTYLAMRVAYFNELDTYAASHRLNTRQIIEGVSLDPRIGHHYNNPSFGYGGYCLPKDTKQLLANYQDVPQHLIQAIVDSNRTRKDFIADAILQKKPKVVGIYRLIMKSGSDNFRTSSVQGIMKRIHAKGIEIVVYEPVLKEKTFFGCQVIEDLVRFKNKSDVIIANRPTYHLNDVSKKVFTRDLFGHD
SIO_010081: HDEF_RS02620
subclass of: SO_0000673
so part of: HDEF_RS02620
location: complement(534870..536036)
location: region:534870-536036:-1
so has part: feature:534870-536036:-1:exon

WP_015873116.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:534870-536036:-1:exon

HDEF_RS02625
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: macB
locus tag: HDEF_RS02625
old locus tag: HDEF_0539
so part of: sequence
location: complement(536225..538201)
location: region:536225-538201:-1
so has part: feature:536225-538201:-1:exon
subclass of: SO_0000010

66260421
type: Gene
SIO_000068: ncbigene

position:536225:-1
position: 536225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:538201:-1
position: 538201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:536225-538201:-1:exon

HDEF_RS02625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: macB
locus tag: HDEF_RS02625
old locus tag: HDEF_0539
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006706283.1
GO component: GO:0016020 - membrane [Evidence IEA]
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: macrolide ABC transporter ATP-binding protein/permease MacB
translation: MREWALAACLPNQSVRRSYQSGEESLDVLKNISLKIYSGELVAIIGASGWGKSTLMNILGYLDQATSGTYYIAGQNVVDLNNDDLAILRREYFGFIFQRYHLLPHLSAAHNVEIPAIYAGSPKNERKKRAVTLLTRLGLGERINYRPNQLYQLSGGQQQRVSIARALMNGGQIILADEPTGALDSHSSVEVMNILKQLQQKGHTVIVVTHNPEVANQADRTIEIKDGEIISDSGYQPTQELKKAPEPSSPSVEQASCQQWVGRLHEALLMAWRAMLSNKMRTALTMLGIIIGIASVVSILVVGDAAQQKVLANIRAIGTNTISIYPGRDYGDDDPSNRQALIYEDIAALQAQSYISAISPIISGNIRLRSGNIDVASTILGVGGQYFKAYGIKIQNGERILERQVRDQSQVVVIDKNTQRRLFPRTKDVIGKEILVGNIPMTVVGIAKEKQSMYGNNNALRIWIPYSTMTNLFTGRSYFDAITVRIKEGYNNNEAEQQLIRLLTLRHGKKDIYTFNVNTVLKTAEKTTRTMQLFLSLVAAISLVVGGIGVMNIMLVSVTERTREIGIRMAVGARSSDVLQQFLIEAVLVCLVGGTIGILLSFCIGFAVEFFLPTWSLTFSSIALFIAFFCSTMIGIVFGYLPARHASRLNPIDALAPE
SIO_010081: HDEF_RS02625
subclass of: SO_0000673
so part of: HDEF_RS02625
location: complement(536225..538201)
location: region:536225-538201:-1
so has part: feature:536225-538201:-1:exon

WP_100103876.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:536225-538201:-1:exon

HDEF_RS02630
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: ltrA
locus tag: HDEF_RS02630
old locus tag: HDEF_0540
so part of: sequence
location: complement(538247..539929)
location: region:538247-539929:-1
so has part: feature:538247-539929:-1:exon
subclass of: SO_0000010

66260422
type: Gene
SIO_000068: ncbigene

position:538247:-1
position: 538247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:539929:-1
position: 539929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:538247-539929:-1:exon

HDEF_RS02630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: ltrA
locus tag: HDEF_RS02630
old locus tag: HDEF_0540
EC number: 2.7.7.49
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015873279.1
GO function: GO:0003964 - RNA-directed DNA polymerase activity [Evidence IEA]
GO process: GO:0000373 - Group II intron splicing [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: group II intron reverse transcriptase/maturase
translation: MPMANVINQNYEQQLEWHAINWRVVTAMINNLRQRIYRASATGDLKKVRNLQKLMMKSRANHLLAIRKVTQVNRGKHTAGVDNQVINDHKGREHLYKLLSQTTSEKVYPVKRVYIAKKNGKKRPLGIPTILDRCRQAIVKSALEPYWEAKFEPVSYGFRPGRSAHDAIQKIFCIARARGTRHWVLDADIKGAFDNIDHNFLIKKIGGFPERNMIKQWLQAGVLEHGNYIPNVAGTPQGGIISPLLANIALHGMETLLGIQYWKNGTPKQGQPYAVVRYADDFVVFGKSREECETAKIKLQIWLAQRGLALSEEKTSIKHLKEGFDFLGFNIRHYDNRHRKRGYILLTKPSKESMKRYKQQMRMTWKGIIGMPTQEGIRQLNAKIIGWCNYYRIGASKRTFSALDQWMWIRQRRYLYRRHPNKHWWWRRKHYLGKIPGREDYSVFMDKSTGGFLWKHAWTKIQRHWLVPKNASPDNPELRDYWRNRQARKQPFIYGVKVNLYKRQKGYCPLCDQELDNGEQLHVHHIQPKAEGGDNKLANLRLLHANCHRQLHSKKGKMLK
SIO_010081: HDEF_RS02630
subclass of: SO_0000673
so part of: HDEF_RS02630
location: complement(538247..539929)
location: region:538247-539929:-1
so has part: feature:538247-539929:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:538247-539929:-1:exon

HDEF_RS02635
type: Gene
subclass of: SO_0000704
RO_0002162: 572265
gene: macA
locus tag: HDEF_RS02635
old locus tag: HDEF_0541
so part of: sequence
location: complement(540531..541667)
location: region:540531-541667:-1
so has part: feature:540531-541667:-1:exon
subclass of: SO_0000010

66260423
type: Gene
SIO_000068: ncbigene

position:540531:-1
position: 540531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:541667:-1
position: 541667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:540531-541667:-1:exon

HDEF_RS02635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 572265
gene: macA
locus tag: HDEF_RS02635
old locus tag: HDEF_0541
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016857402.1
GO component: GO:0019898 - extrinsic component of membrane [Evidence IEA]; GO:1990195 - macrolide transmembrane transporter complex [Evidence IEA]
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO process: GO:1990961 - xenobiotic detoxification by transmembrane export across the plasma membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: macrolide transporter subunit MacA
translation: MNLIWLKKLNKKVIVIPLILLMSGFFVIRFQMKPAEIQYKTVSVTQGDIVQSVLATGKLDALRKVDVGAQVSGQLQHLYVKIGDKVKQGQLLGMIDPQKAKNQIKEVAAALEDLNAQSAQAEAEKKLTLLTLNRQKNLARLKLISPQDIDQTETDLAVRKAKIEMIKAQINRTRISLDTANLNLEYTKISAPMSGEVVQITTLEGQTVIATQQVPNILTLADMSTMLVNTQVSEADIIHLKPGLKISFTILGDPNKHFEGVLKDIQPTPESINDAIFYSARFEVPNSKGLLRLKMTAQVSIQLAEARKAMLMPLSALGNQIDGNRYQVSVLVKDKDNKNQEETREVTIGIRNNLNVQILSGLKLGEKVIISRFNSEDI
SIO_010081: HDEF_RS02635
subclass of: SO_0000673
so part of: HDEF_RS02635
location: complement(540531..541667)
location: region:540531-541667:-1
so has part: feature:540531-541667:-1:exon

WP_015873118.1
type: Protein
SIO_000068: ncbiprotein