Thermus brockianus strain SNM4-1 plasmid pTbrSNM4-1c, complete sequence.
type: Entry
definition: Thermus brockianus strain SNM4-1 plasmid pTbrSNM4-1c, complete sequence.
sequence version: NZ_AP025595.1
sequence date: 2023-03-20
sequence: sequence
division: CON
label: NZ_AP025595.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMD00442900
keyword: RefSeq
source: Thermus brockianus
organism: Thermus brockianus
taxonomy: Bacteria; Deinococcota; Deinococci; Thermales; Thermaceae; Thermus.
reference: 1
references: 35638895
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nAP025595.1.\nAnnotated by DFAST https://dfast.ddbj.nig.ac.jp/\n\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Unicycler v. 0.4.8\nGenome Coverage :: 214x\nSequencing Technology :: MiSeq; GridION\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 03/20/2023 11:05:28\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 2,545\nCDSs (total) :: 2,489\nGenes (coding) :: 2,439\nCDSs (with protein) :: 2,439\nGenes (RNA) :: 56\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 47\nncRNAs :: 3\nPseudo Genes (total) :: 50\nCDSs (without protein) :: 50\nPseudo Genes (ambiguous residues) :: 0 of 50\nPseudo Genes (frameshifted) :: 33 of 50\nPseudo Genes (incomplete) :: 19 of 50\nPseudo Genes (internal stop) :: 10 of 50\nPseudo Genes (multiple problems) :: 12 of 50\nCRISPR Arrays :: 7\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 25316
topology: circular
so has quality: SO_0000988
location: 1..25316
location: region:1-25316:1
RO_0002162: 56956

NZ_AP025595
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMD00442900
type: BioSample
SIO_000068: biosample

1
title: Complete Genome Sequences of Thermus Strains Isolated from Senami Hot Spring in Japan
author: Miyazaki, K.
journal: Microbiol Resour Announc 11 (7), e0035422 (2022)
pubmed: 35638895
comments: DOI:10.1128/mra.00354-22

35638895
type: PubMed
SIO_000068: pubmed

2
title: Direct Submission
author: Miyazaki, K.
journal: Submitted (21-FEB-2022) Contact:Kentaro Miyazaki National Institute of Advanced Industrial Science and Technology; 1-1-1 Higashi, Tsukuba 305-8566, Japan

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25316:1
position: 25316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-25316:1:source
so part of: sequence
organism: Thermus brockianus
mol type: genomic DNA
strain: SNM4-1
isolation source: hot spring water
plasmid: pTbrSNM4-1c
country: Japan:Niigata, Senami Hot Spring
collection date: 2021-10-11
collected by: Kentaro Miyazaki

56956
type: Taxonomy
SIO_000068: taxonomy

MWM05_RS12615
type: Gene
subclass of: SO_0000704
RO_0002162: 56956
locus tag: MWM05_RS12615
so part of: sequence
location: complement(373..852)
location: region:373-852:-1
so has part: feature:373-852:-1:exon
subclass of: SO_0000010

position:373:-1
position: 373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:852:-1
position: 852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:373-852:-1:exon

MWM05_RS12615
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 56956
locus tag: MWM05_RS12615
inference: COORDINATES: protein motif:HMM:NF019575.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: prepilin-type N-terminal cleavage/methylation domain-containing protein
translation: MRGSGFSLLEALVVLAVLAILSGIAVLNVRPLYDPLQDGLARTEGYLKKVRAKAMATTSAYRVVLVSENGKPKLKASYTYRCDAGLSFSNDPQLVQDFPTEVQVSVNPSDAFLCFTSRGTLVFRTNQPGFSGNPEIELRDNRGRSSKVQLLLGGGVVRR
SIO_010081: MWM05_RS12615
subclass of: SO_0000673
so part of: MWM05_RS12615
location: complement(373..852)
location: region:373-852:-1
so has part: feature:373-852:-1:exon

WP_126208793.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:373-852:-1:exon

MWM05_RS12620
type: Gene
subclass of: SO_0000704
RO_0002162: 56956
locus tag: MWM05_RS12620
old locus tag: TbrSNM41_25010
so part of: sequence
location: 943..2163
location: region:943-2163:1
so has part: feature:943-2163:1:exon
subclass of: SO_0000010

position:943:1
position: 943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2163:1
position: 2163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:943-2163:1:exon

MWM05_RS12620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 56956
locus tag: MWM05_RS12620
old locus tag: TbrSNM41_25010
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011228558.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS256-like element ISTth4 family transposase
translation: MFNRGAHLSTRRCPVDQDTLRILLREAVRETVAEVLQTVLELDRTAFLQVHGGRRNGYYPRKLETAFGQVDLKVPRDRESRYYPAFLKPYVRRLVDVGEVAVALYAAGVSQRKAAEILSLLLGHHYSHETLSALTDEVLEAAGAFRTRPLPEEMAFVYLDGLSLKVFREGEGIVRESVYVALGIAPNGERRVLGFWLLPTESALGWEGVLGELWQRGLRRVLLFITDGLPGLPEAIRRVYPQAEWQRCVVHGVRWSLSQVRARDRGLLAEDLRRVYGAESREEALGALEEVKAAWGSRYPGVVGLWVQDSGAFLRFYGYPKVLWPYLRSTNLMERFIREVRRGTKVRDHKFPKEEAVYKLLYLESERQEGRWAERKLKGFSEVKEVLEKMLQERYAPRTQTLTHNS
SIO_010081: MWM05_RS12620
subclass of: SO_0000673
so part of: MWM05_RS12620
location: 943..2163
location: region:943-2163:1
so has part: feature:943-2163:1:exon

WP_244363989.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:943-2163:1:exon

MWM05_RS12625
type: Gene
subclass of: SO_0000704
RO_0002162: 56956
locus tag: MWM05_RS12625
so part of: sequence
location: 2586..2768
location: region:2586-2768:1
so has part: feature:2586-2768:1:exon
subclass of: SO_0000010

position:2586:1
position: 2586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2768:1
position: 2768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2586-2768:1:exon

MWM05_RS12625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 56956
locus tag: MWM05_RS12625
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLAYLYVEDPRGDWAYGGRRFLQVNLEMVRAGWADPYTVPPNVRYAHLYLEAARAKGRGM
SIO_010081: MWM05_RS12625
subclass of: SO_0000673
so part of: MWM05_RS12625
location: 2586..2768
location: region:2586-2768:1
so has part: feature:2586-2768:1:exon

WP_244363990.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2586-2768:1:exon

MWM05_RS12630
type: Gene
subclass of: SO_0000704
RO_0002162: 56956
locus tag: MWM05_RS12630
so part of: sequence
location: complement(2777..3268)
location: region:2777-3268:-1
so has part: feature:2777-3268:-1:exon
subclass of: SO_0000010

position:2777:-1
position: 2777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3268:-1
position: 3268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2777-3268:-1:exon

MWM05_RS12630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 56956
locus tag: MWM05_RS12630
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRALVQKFILLLRNEAQRIDAHEEEFRAFFRDELRAGIARFLFASVLTLVGVLTGNSGLFSFVQALFSINPTLLFGAILFTLVLVYFFLPRRHNFLVFTFFVVLHDARSALFYLAGFFFGATPGLAVLGQTGIAILTFVVFVVVFLIAVLPFIVYWPRSKGKN
SIO_010081: MWM05_RS12630
subclass of: SO_0000673
so part of: MWM05_RS12630
location: complement(2777..3268)
location: region:2777-3268:-1
so has part: feature:2777-3268:-1:exon

WP_244363991.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2777-3268:-1:exon

MWM05_RS12635
type: Gene
subclass of: SO_0000704
RO_0002162: 56956
locus tag: MWM05_RS12635
old locus tag: TbrSNM41_25030
so part of: sequence
location: complement(3265..4914)
location: region:3265-4914:-1
so has part: feature:3265-4914:-1:exon
subclass of: SO_0000010

position:3265:-1
position: 3265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4914:-1
position: 4914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3265-4914:-1:exon

MWM05_RS12635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 56956
locus tag: MWM05_RS12635
old locus tag: TbrSNM41_25030
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014271874.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: metal-dependent hydrolase
translation: MTAGTHLAGAALTASLLRGFGVEVGLVEGVALAWGSVMPDIDTTTSGPGKFVRPLSSFLERRFGHRTLTHSLLFTLALALLLYPLWRASPGVYWAFLVGYLSHLLLDTLNVNGVPLLWPWRVQFWFFASREWRIRYASPQEATLALVLALFAFVLWPVSGQGFASAFRHLVGTPEVAVLDYLDWRDRWEVWAEVKGFNRETQEALEGRFLVVEAIGREGVLVEDELGRTLAVSRNGQVVAYRVRMFRGRPHILREWRLDLAGRLVGDLLQALPKGARRVWITGEAALASDPPPLVPPVGTYPRVEASANPPRLRLHAARPEDLAPLSALYLRAGSAVVRASFPPGSGEEASLVLPDLPALPQVHPIVIPDLPSLAGLLVRPGDRVEEGEPLARYVDEVPLAELSERAQAKREEAARLEGELARLEERYRAEREALERELAQARDALARVRYLVAQGAEPRLRQTEAEAKVQSLEERRTRLVLDYTGERARLEERIREARLEASRLERMREREADRQLVRSPVAGRVVEVKVRDIGPKGVTVEIVLSSLP
SIO_010081: MWM05_RS12635
subclass of: SO_0000673
so part of: MWM05_RS12635
location: complement(3265..4914)
location: region:3265-4914:-1
so has part: feature:3265-4914:-1:exon

WP_244363992.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3265-4914:-1:exon

MWM05_RS12640
type: Gene
subclass of: SO_0000704
RO_0002162: 56956
locus tag: MWM05_RS12640
old locus tag: TbrSNM41_25040
so part of: sequence
location: complement(4911..5168)
location: region:4911-5168:-1
so has part: feature:4911-5168:-1:exon
subclass of: SO_0000010

position:4911:-1
position: 4911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5168:-1
position: 5168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4911-5168:-1:exon

MWM05_RS12640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 56956
locus tag: MWM05_RS12640
old locus tag: TbrSNM41_25040
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018461184.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRVEELDFLRRRVAELEAERQKLLARLAYLEARARDLPKGGVLSREKAEELHGLLSAVWLELNELHPARVEDLDRALRLLEDALR
SIO_010081: MWM05_RS12640
subclass of: SO_0000673
so part of: MWM05_RS12640
location: complement(4911..5168)
location: region:4911-5168:-1
so has part: feature:4911-5168:-1:exon

WP_126201482.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4911-5168:-1:exon

MWM05_RS12645
type: Gene
subclass of: SO_0000704
RO_0002162: 56956
locus tag: MWM05_RS12645
old locus tag: TbrSNM41_25050
so part of: sequence
location: complement(5165..5611)
location: region:5165-5611:-1
so has part: feature:5165-5611:-1:exon
subclass of: SO_0000010

position:5165:-1
position: 5165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5611:-1
position: 5611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5165-5611:-1:exon

MWM05_RS12645
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 56956
locus tag: MWM05_RS12645
old locus tag: TbrSNM41_25050
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014271876.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGFRAATPLFLLLTLSACEPPTAGREVEVPLRLYRWQGEAYRAEPLPGKPLKVGVYLYRQGQEVWAHLRPEGGEAGLEGTLALVLEGPGGERAAEAVREGKASFLQVKGKADRPACAFYLVSLSPDPWSEDLEVRLYHESGRVCEEER
SIO_010081: MWM05_RS12645
subclass of: SO_0000673
so part of: MWM05_RS12645
location: complement(5165..5611)
location: region:5165-5611:-1
so has part: feature:5165-5611:-1:exon

WP_244363993.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5165-5611:-1:exon

MWM05_RS12650
type: Gene
subclass of: SO_0000704
RO_0002162: 56956
locus tag: MWM05_RS12650
old locus tag: TbrSNM41_25060
so part of: sequence
location: complement(5632..6309)
location: region:5632-6309:-1
so has part: feature:5632-6309:-1:exon
subclass of: SO_0000010

position:5632:-1
position: 5632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6309:-1
position: 6309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5632-6309:-1:exon

MWM05_RS12650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 56956
locus tag: MWM05_RS12650
old locus tag: TbrSNM41_25060
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018461182.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TolC family protein
translation: MRWAFLLFALLPALAQAPGLTQEEARILDRLVEEALPRDPGYLRALADLEASRQTLGILGAVSAEVGASLAGEYGQVAPSYRLAVSLNLAELFRDRSPALKALEAQVEAQRREVRVRVAGAFFRWLSAREAARTAADGVEAREAELKAQQARARVGGATPAEVLAAAERLSQARLALYRANLDLALALEDLARAVGLPLDALRALLRPLEAQGGTSVAPPGPRGP
SIO_010081: MWM05_RS12650
subclass of: SO_0000673
so part of: MWM05_RS12650
location: complement(5632..6309)
location: region:5632-6309:-1
so has part: feature:5632-6309:-1:exon

WP_244363999.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5632-6309:-1:exon

MWM05_RS12870
type: Gene
subclass of: SO_0000704
RO_0002162: 56956
locus tag: MWM05_RS12870
old locus tag: TbrSNM41_25070
so part of: sequence
location: complement(6306..7223)
location: region:6306-7223:-1
so has part: feature:6306-7223:-1:exon
subclass of: SO_0000010

position:6306:-1
position: 6306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7223:-1
position: 7223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6306-7223:-1:exon

MWM05_RS12870
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 56956
locus tag: MWM05_RS12870
old locus tag: TbrSNM41_25070
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014271879.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MFVGRKEEGRAVLLSVRAGRGVVLVGPPGYGKSALLQELKPALEAWGVVVWADKLAPFGAFLKDLFRGLWDARIPVEGVGISKDLEADLRTWGKRYPSNDEKAKSLVKALRAYAENGVNRAAVVVDDATGVQGSMVPWLVALAEVANLVLAAHPDTLKKANTKRLWMRLDRVDLPPLSPKESRALAEALVERYGVVAEDREVYLSRVVALSGGIPGEIERLVRYVSAEDIVRNRDVGTGYAEGLAQREERGVALAPILLVAGGVAIAARYLGLARGEMDLYVAGGLGIAAFVVLAPWLRKAVVAR
SIO_010081: MWM05_RS12870
subclass of: SO_0000673
so part of: MWM05_RS12870
location: complement(6306..7223)
location: region:6306-7223:-1
so has part: feature:6306-7223:-1:exon

WP_275973854.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6306-7223:-1:exon

MWM05_RS12665
type: Gene
subclass of: SO_0000704
RO_0002162: 56956
locus tag: MWM05_RS12665
old locus tag: TbrSNM41_25080
so part of: sequence
location: 7370..7582
location: region:7370-7582:1
so has part: feature:7370-7582:1:exon
subclass of: SO_0000010

position:7370:1
position: 7370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7582:1
position: 7582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7370-7582:1:exon

MWM05_RS12665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 56956
locus tag: MWM05_RS12665
old locus tag: TbrSNM41_25080
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018461176.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MLPVDKPLFLTPEELAEALRVSPETVRRWLRTGEVKGQRAGRLWRVPWEEGVRLLGDEEKLVEALKGVKG
SIO_010081: MWM05_RS12665
subclass of: SO_0000673
so part of: MWM05_RS12665
location: 7370..7582
location: region:7370-7582:1
so has part: feature:7370-7582:1:exon

WP_126201492.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7370-7582:1:exon

MWM05_RS12670
type: Gene
subclass of: SO_0000704
RO_0002162: 56956
locus tag: MWM05_RS12670
old locus tag: TbrSNM41_25090
so part of: sequence
location: 7579..8238
location: region:7579-8238:1
so has part: feature:7579-8238:1:exon
subclass of: SO_0000010

position:7579:1
position: 7579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8238:1
position: 8238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7579-8238:1:exon

MWM05_RS12670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 56956
locus tag: MWM05_RS12670
old locus tag: TbrSNM41_25090
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014271881.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MKVVAVVNGKGGVGKTTTAVNLAAILAERTPVLLVDADPQGSATWWAGRGEMPFDLAQEADPRLLLRLRRVRGYGAVVVDTPPALRSEGLKAVLQASDFAILPTPPAPLDLEALVETVRAAVRPLGVPHRVLLTRVDPRSLGEALEAQTALMEAGVPAFHAFVRAYKAHERAALEGKPITRWRGPNAREGEADYRRVAEELLRELGEGALALEEVREGA
SIO_010081: MWM05_RS12670
subclass of: SO_0000673
so part of: MWM05_RS12670
location: 7579..8238
location: region:7579-8238:1
so has part: feature:7579-8238:1:exon

WP_244363994.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7579-8238:1:exon

MWM05_RS12675
type: Gene
subclass of: SO_0000704
RO_0002162: 56956
locus tag: MWM05_RS12675
old locus tag: TbrSNM41_25100
so part of: sequence
location: 8235..8585
location: region:8235-8585:1
so has part: feature:8235-8585:1:exon
subclass of: SO_0000010

position:8235:1
position: 8235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8585:1
position: 8585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8235-8585:1:exon

MWM05_RS12675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 56956
locus tag: MWM05_RS12675
old locus tag: TbrSNM41_25100
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014271882.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATPase
translation: MRRKRLAELVREEAEALTAPQAEAAIPETPTQEEAPEPPPKPAPKYLTYVRKECRLRPDQLDALTALARKLNRERKGKGERITENTLIRWAVDILLQQTEQLALNVDQLSPKDNPG
SIO_010081: MWM05_RS12675
subclass of: SO_0000673
so part of: MWM05_RS12675
location: 8235..8585
location: region:8235-8585:1
so has part: feature:8235-8585:1:exon

WP_126209454.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8235-8585:1:exon

MWM05_RS12680
type: Gene
subclass of: SO_0000704
RO_0002162: 56956
locus tag: MWM05_RS12680
old locus tag: TbrSNM41_25110
so part of: sequence
location: 8641..9570
location: region:8641-9570:1
so has part: feature:8641-9570:1:exon
subclass of: SO_0000010

position:8641:1
position: 8641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9570:1
position: 9570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8641-9570:1:exon

MWM05_RS12680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 56956
locus tag: MWM05_RS12680
old locus tag: TbrSNM41_25110
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012258384.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: NotI family restriction endonuclease
translation: MSLEGSNMSTKKQPLAEVFGYTITDNTEIAKRHRMNRLCPFNNKVPNCTKDKANNPLGVCSIYHENKPVITCPIRFRQNWLVAEDAAHFFFNEGTNWTSLTEVRLNDADGKPAGNIDVVLVAYDATSGKVVDFGALEIQAVYISGNIRAPFEYYMRDPTAYQDADWSKESNFPRPDYLSSSRKRLVPQLLYKGRILRSWNKKIAVAIQKSFFATLPKMHSVPKTDADLAWLIYDLELTTDEQGNERFNLKKVDEVFTKLDPALDSITTPSPGKLEDFIRVLQEKIDEQLETPPNNRTLAEELLNHYEED
SIO_010081: MWM05_RS12680
subclass of: SO_0000673
so part of: MWM05_RS12680
location: 8641..9570
location: region:8641-9570:1
so has part: feature:8641-9570:1:exon

WP_244363995.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8641-9570:1:exon

MWM05_RS12685
type: Gene
subclass of: SO_0000704
RO_0002162: 56956
locus tag: MWM05_RS12685
old locus tag: TbrSNM41_25120
so part of: sequence
location: 9557..10465
location: region:9557-10465:1
so has part: feature:9557-10465:1:exon
subclass of: SO_0000010

position:9557:1
position: 9557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10465:1
position: 10465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9557-10465:1:exon

MWM05_RS12685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 56956
locus tag: MWM05_RS12685
old locus tag: TbrSNM41_25120
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012258385.1
GO function: GO:0009007 - site-specific DNA-methyltransferase (adenine-specific) activity [Evidence IEA]
GO process: GO:0032775 - DNA methylation on adenine [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA adenine methylase
translation: MRRIEEVPLFPEHWGETRPTQLINVASVPQRSPFRYPGGKTWFVPVFRRWITSLRRRPSVLVEPFAGGGIISLTAIFEDLVPQAVMVELDEEVAAVWEIILEGEAEWLANQILSFKMTKDTVLELLNSSPQTKKEKAFQTIVKNRVLRGGILAKGSSLMKRGENGKGISSRWYPKTIARRIIDISRVAHRIIFRNEDGLRVMSEFANREDVIYFIDPPYTADPQKPGKRLYKYHQIDHEALFTLCQSLRGDFLMTYNASDEVKLMASRYGFELCSIPMKTAHHKVKWELVIGRDLSWMQDCS
SIO_010081: MWM05_RS12685
subclass of: SO_0000673
so part of: MWM05_RS12685
location: 9557..10465
location: region:9557-10465:1
so has part: feature:9557-10465:1:exon

WP_234508656.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9557-10465:1:exon

MWM05_RS12690
type: Gene
subclass of: SO_0000704
RO_0002162: 56956
locus tag: MWM05_RS12690
old locus tag: TbrSNM41_25130
so part of: sequence
location: complement(10467..11384)
location: region:10467-11384:-1
so has part: feature:10467-11384:-1:exon
subclass of: SO_0000010

position:10467:-1
position: 10467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11384:-1
position: 11384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10467-11384:-1:exon

MWM05_RS12690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 56956
locus tag: MWM05_RS12690
old locus tag: TbrSNM41_25130
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014630459.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
translation: MELFARFRRYLEMEEGRSPRTAKEYVLDSALFSSWYRERYGRPPRWEEIGSQHIRAFLASREVSPHRVGRVLASLRKLFRYLAEVEALPILKDPTEGVKRPKLPRRLPVYLTPPEVARLLEAAYKHRSPRIGLRDWALLAFLYGTGLRLSEALALTYSDLTYQDGIPHAIRVRGKGDKERVVVLSPTAQRALYQWLKHRNLEGHPTSPYVWSHTSGPNRGKPFSPRAVEAMVKRVAKRAGLKDWHRITPHKLRHSYASALVEAGRGIDEVKELLGHSSISTTQIYVHVSRKRLEEAAKALPDVMA
SIO_010081: MWM05_RS12690
subclass of: SO_0000673
so part of: MWM05_RS12690
location: complement(10467..11384)
location: region:10467-11384:-1
so has part: feature:10467-11384:-1:exon

WP_244363996.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10467-11384:-1:exon

MWM05_RS12695
type: Gene
subclass of: SO_0000704
RO_0002162: 56956
locus tag: MWM05_RS12695
old locus tag: TbrSNM41_25140
so part of: sequence
location: 11735..12031
location: region:11735-12031:1
so has part: feature:11735-12031:1:exon
subclass of: SO_0000010

position:11735:1
position: 11735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12031:1
position: 12031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11735-12031:1:exon

MWM05_RS12695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 56956
locus tag: MWM05_RS12695
old locus tag: TbrSNM41_25140
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012477500.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MAKDARKGGEAGEARDPLEGKLLLTIPEVARALGLSTRTIWKLINEGKLKRVHPTPRSSRVTRESLEAFLRSLEKGEEEVRVKGIADRAREVLKRFGL
SIO_010081: MWM05_RS12695
subclass of: SO_0000673
so part of: MWM05_RS12695
location: 11735..12031
location: region:11735-12031:1
so has part: feature:11735-12031:1:exon

WP_126201512.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11735-12031:1:exon

MWM05_RS12700
type: Gene
subclass of: SO_0000704
RO_0002162: 56956
locus tag: MWM05_RS12700
old locus tag: TbrSNM41_25150
so part of: sequence
location: 12028..12975
location: region:12028-12975:1
so has part: feature:12028-12975:1:exon
subclass of: SO_0000010

position:12028:1
position: 12028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12975:1
position: 12975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12028-12975:1:exon

MWM05_RS12700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 56956
locus tag: MWM05_RS12700
old locus tag: TbrSNM41_25150
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018461195.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKEAKEEKKAGPQLPHQAVLFLPGVLAEGVFRSERLPEGVGVSLGGRARENPEGEAGEGVFSLWPRTDGEGRLLEVQVATRLREPYAGPEAAAQGVLIWADRAKLTLLVIPKAGEPFRITFLRAQGFSAPMEAKKAYRVEGRLEGEHLVAERAWPLGKYVEAKRKKEPVPPAIAGRENPYLERAGRGEGKKKAPVPPGKPPTPSPEKPPAPKVKEARRDPVRVWRAPEEPEDPAPPDLGRPPALKRGQLMGIAGTGPFYLVLLPQVVPEWWPRVEARLPELTRRYEVRFYPDGSRAVVCGDLEALKVWYKRVLRG
SIO_010081: MWM05_RS12700
subclass of: SO_0000673
so part of: MWM05_RS12700
location: 12028..12975
location: region:12028-12975:1
so has part: feature:12028-12975:1:exon

WP_244363998.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12028-12975:1:exon

MWM05_RS12705
type: Gene
subclass of: SO_0000704
RO_0002162: 56956
locus tag: MWM05_RS12705
old locus tag: TbrSNM41_25160
so part of: sequence
location: complement(12965..13708)
location: region:12965-13708:-1
so has part: feature:12965-13708:-1:exon
subclass of: SO_0000010

position:12965:-1
position: 12965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13708:-1
position: 13708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12965-13708:-1:exon

MWM05_RS12705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 56956
locus tag: MWM05_RS12705
old locus tag: TbrSNM41_25160
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014271895.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PD-(D/E)XK nuclease family protein
translation: MAYQDWLFKDHSSGWRIRYRRDGRGYEASQDGQGWLPVPSVTQITGLLNKNLHEWAVRQVVEYLKGELVPGLVLTPEEVERILNGASQAHRMASQAAASRGATLHAWAEAYLKGPNPPWPEEEPLRSMALGLAEWWEGNGGNRLLSEEVVFHPGHLYAGRVDLVAFLGGRLVVLDLKTSTRAYPEHLLQVGAYALALREEGLPVDGGLVLALREGLNVAEVPLDEAAEAFLGLRRAFDFLQALKAIP
SIO_010081: MWM05_RS12705
subclass of: SO_0000673
so part of: MWM05_RS12705
location: complement(12965..13708)
location: region:12965-13708:-1
so has part: feature:12965-13708:-1:exon

WP_244363980.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12965-13708:-1:exon

MWM05_RS12710
type: Gene
subclass of: SO_0000704
RO_0002162: 56956
locus tag: MWM05_RS12710
old locus tag: TbrSNM41_25170
so part of: sequence
location: complement(13739..14962)
location: region:13739-14962:-1
so has part: feature:13739-14962:-1:exon
subclass of: SO_0000010

position:13739:-1
position: 13739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14962:-1
position: 14962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13739-14962:-1:exon

MWM05_RS12710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 56956
locus tag: MWM05_RS12710
old locus tag: TbrSNM41_25170
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014271896.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTPEQSKRTEYQEQGFSAEGRAFLEALVRRKRARGEEVPPLYQKLLEAAPNPPSDEAPFTGEARTLGLKPPHDSPFRAHQVAVGGLAAPAGGRAELTLAPPPAPEMRPSVLHLVDRALEGHPEVLESLSPTARRAYRLLLALGLELTARQLGDRPLPKNLSQVVAFTVNRALAAALGVSEATLYRALAELEEAVLVRRRAWRTPSVVHGRAGLHAAGAVYAVRLPHRSRRPRLEREDFAHPWRDLEGDIARGRTAWKAVRECKENPPKEGSGAVEFLLGFALPPQGQEAALAIHSLTARLRQARGQEKRLLVAQIALGLAREFKDPGSVKFYAWLLWGALRAEIYGLHERALEVVLWAVGRVREALAASLWGSRGQRIRRPGALLASLLSERGLVDLFRRAPAWRVA
SIO_010081: MWM05_RS12710
subclass of: SO_0000673
so part of: MWM05_RS12710
location: complement(13739..14962)
location: region:13739-14962:-1
so has part: feature:13739-14962:-1:exon

WP_244363981.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13739-14962:-1:exon

MWM05_RS12715
type: Gene
subclass of: SO_0000704
RO_0002162: 56956
locus tag: MWM05_RS12715
old locus tag: TbrSNM41_25180
so part of: sequence
location: 15470..16750
location: region:15470-16750:1
so has part: feature:15470-16750:1:exon
subclass of: SO_0000010

position:15470:1
position: 15470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16750:1
position: 16750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15470-16750:1:exon

MWM05_RS12715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 56956
locus tag: MWM05_RS12715
old locus tag: TbrSNM41_25180
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018461192.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tetratricopeptide repeat protein
translation: MGPEGVDLEAVRLYLQAGRYMEAEAALDLDPRPADPEWLRLKGWARWHLGDERGLQMVERAARMVRQGAGWVWQDLGALLFRAGRWQEAEEALKRALDHFLAEDDHLGRAWALHGLGVAALHRGRLTRALERAEEAWALVRMKALGSFRGRVLTLLSSVHRARGELREALFRARQAAEGKGDADDRAVALRSLGTAFRLAGRPALGKARLEEALKLSAEGARRGAALAELSACYLALGWKREARRAAGEALGLLDTHAPARSRVLVVLAELARMESPEDGGGALALLEEALTIGPYPLMEEALGFPELFAFAERNGLRLPKARRAPDKPKVVLEDGPERRLWVGRRSVPLEGSGRAFDLLALLLREGPLHWREAALRLWGEDGPGVRERLHMTASRVRDLLADREAVRWRGEVLSLDSERRWDLRH
SIO_010081: MWM05_RS12715
subclass of: SO_0000673
so part of: MWM05_RS12715
location: 15470..16750
location: region:15470-16750:1
so has part: feature:15470-16750:1:exon

WP_256464045.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15470-16750:1:exon

MWM05_RS12720
type: Gene
subclass of: SO_0000704
RO_0002162: 56956
locus tag: MWM05_RS12720
old locus tag: TbrSNM41_25190
so part of: sequence
location: complement(17109..17387)
location: region:17109-17387:-1
so has part: feature:17109-17387:-1:exon
subclass of: SO_0000010

position:17109:-1
position: 17109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17387:-1
position: 17387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17109-17387:-1:exon

MWM05_RS12720
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 56956
locus tag: MWM05_RS12720
old locus tag: TbrSNM41_25190
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018461191.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: winged helix-turn-helix domain-containing protein
translation: MSVPRRPLYDPEKFRGLPCSARLVWFHIWALGEDEYPARKLAEALEISPNAAAMALRALVERGLLEVVRTPAGSRAGVYRVVYVSKDGKKQN
SIO_010081: MWM05_RS12720
subclass of: SO_0000673
so part of: MWM05_RS12720
location: complement(17109..17387)
location: region:17109-17387:-1
so has part: feature:17109-17387:-1:exon

WP_239725157.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17109-17387:-1:exon

MWM05_RS12725
type: Gene
subclass of: SO_0000704
RO_0002162: 56956
locus tag: MWM05_RS12725
old locus tag: TbrSNM41_25200
so part of: sequence
location: complement(17601..17975)
location: region:17601-17975:-1
so has part: feature:17601-17975:-1:exon
subclass of: SO_0000010

position:17601:-1
position: 17601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17975:-1
position: 17975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17601-17975:-1:exon

MWM05_RS12725
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 56956
locus tag: MWM05_RS12725
old locus tag: TbrSNM41_25200
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018461190.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEAKTRNPQTEVLARLEEVLEALRERSQNLIAAIAAHAEARLGYEAALDALEDARARAIREGLEGRNEQARQAELLEKTREQEAALRSARAIYRITEANLEMARVAWSLEKEVLRALTALLGDR
SIO_010081: MWM05_RS12725
subclass of: SO_0000673
so part of: MWM05_RS12725
location: complement(17601..17975)
location: region:17601-17975:-1
so has part: feature:17601-17975:-1:exon

WP_244363982.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17601-17975:-1:exon

MWM05_RS12795
type: Gene
subclass of: SO_0000704
RO_0002162: 56956
locus tag: MWM05_RS12795
old locus tag: TbrSNM41_25210
so part of: sequence
location: complement(18020..18154)
location: region:18020-18154:-1
so has part: feature:18020-18154:-1:exon
subclass of: SO_0000010

position:18020:-1
position: 18020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18154:-1
position: 18154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18020-18154:-1:exon

MWM05_RS12795
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 56956
locus tag: MWM05_RS12795
old locus tag: TbrSNM41_25210
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRRILALLLLALLAAAALPAAQAQDPGLVQPLSDEVKGLGPGRK
SIO_010081: MWM05_RS12795
subclass of: SO_0000673
so part of: MWM05_RS12795
location: complement(18020..18154)
location: region:18020-18154:-1
so has part: feature:18020-18154:-1:exon

WP_256464046.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18020-18154:-1:exon

MWM05_RS12730
type: Gene
subclass of: SO_0000704
RO_0002162: 56956
locus tag: MWM05_RS12730
old locus tag: TbrSNM41_25220
so part of: sequence
location: complement(18154..18477)
location: region:18154-18477:-1
so has part: feature:18154-18477:-1:exon
subclass of: SO_0000010

position:18477:-1
position: 18477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18154-18477:-1:exon

MWM05_RS12730
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 56956
locus tag: MWM05_RS12730
old locus tag: TbrSNM41_25220
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MEKLSTGLQVLSRKQAVSDAAYQVAQVREWLAELYGWTISGGQDYITVLIRARDVLENLYRVFGLASAFASLDSHSADITAFFEEARLEAAQILAWRESQKKGEEVA
SIO_010081: MWM05_RS12730
subclass of: SO_0000673
so part of: MWM05_RS12730
location: complement(18154..18477)
location: region:18154-18477:-1
so has part: feature:18154-18477:-1:exon

WP_244363983.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18154-18477:-1:exon

MWM05_RS12735
type: Gene
subclass of: SO_0000704
RO_0002162: 56956
locus tag: MWM05_RS12735
old locus tag: TbrSNM41_25230
so part of: sequence
location: complement(18582..19061)
location: region:18582-19061:-1
so has part: feature:18582-19061:-1:exon
subclass of: SO_0000010

position:18582:-1
position: 18582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19061:-1
position: 19061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18582-19061:-1:exon

MWM05_RS12735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 56956
locus tag: MWM05_RS12735
old locus tag: TbrSNM41_25230
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018461188.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSQVFPLSGVVAVAGSRHGSPWPVSPVVQLVVASGGVVRVGDQRGVDAAVRAACPSAVVVRAGQFPGPPAARLAQRTRAVVLGHPGLGLPSASALLVFPPVGGAPALGPGSSLALRLAVGAGLAVWVAGDLRPAGPGWAPLSLAGVPGWVLYPVQSSLF
SIO_010081: MWM05_RS12735
subclass of: SO_0000673
so part of: MWM05_RS12735
location: complement(18582..19061)
location: region:18582-19061:-1
so has part: feature:18582-19061:-1:exon

WP_244363984.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18582-19061:-1:exon

MWM05_RS12740
type: Gene
subclass of: SO_0000704
RO_0002162: 56956
locus tag: MWM05_RS12740
old locus tag: TbrSNM41_25250
so part of: sequence
location: 19539..20021
location: region:19539-20021:1
so has part: feature:19539-20021:1:exon
subclass of: SO_0000010

position:19539:1
position: 19539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20021:1
position: 20021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19539-20021:1:exon

MWM05_RS12740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 56956
locus tag: MWM05_RS12740
old locus tag: TbrSNM41_25250
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLFLEVEEVKEEMRLEGPFKFLYFTKWNFYLVNLGKYGCLVEEIRMYNQKNPPEREGFTFAEDIPILPGERKLIKTLPSVYTTFHQAQPIPLLEGMVGGENEVQLCCVIDYFSGSNPNTPQRTTCAVIFRGKFADRERATIDEIKVSYLNYSREHPGCFP
SIO_010081: MWM05_RS12740
subclass of: SO_0000673
so part of: MWM05_RS12740
location: 19539..20021
location: region:19539-20021:1
so has part: feature:19539-20021:1:exon

WP_244363985.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19539-20021:1:exon

MWM05_RS12745
type: Gene
subclass of: SO_0000704
RO_0002162: 56956
locus tag: MWM05_RS12745
old locus tag: TbrSNM41_25270
so part of: sequence
location: 20218..20589
location: region:20218-20589:1
so has part: feature:20218-20589:1:exon
subclass of: SO_0000010

position:20218:1
position: 20218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20589:1
position: 20589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20218-20589:1:exon

MWM05_RS12745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 56956
locus tag: MWM05_RS12745
old locus tag: TbrSNM41_25270
inference: COORDINATES: protein motif:HMM:NF013970.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PIN domain-containing protein
translation: MTPASSSCLRKSVCPSGQSDRLLEAHEEAKAKWQALVEGEEGLVSGLSLVELLRLGLKGALARQDAELLLKAIPAVCRVVWPDWGIGERAARLSHGLHLPLVDALILATALEAHIPHPLHSSR
SIO_010081: MWM05_RS12745
subclass of: SO_0000673
so part of: MWM05_RS12745
location: 20218..20589
location: region:20218-20589:1
so has part: feature:20218-20589:1:exon

WP_275973852.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20218-20589:1:exon

MWM05_RS12750
type: Gene
subclass of: SO_0000704
RO_0002162: 56956
locus tag: MWM05_RS12750
old locus tag: TbrSNM41_25280
so part of: sequence
location: complement(20574..22202)
location: region:20574-22202:-1
so has part: feature:20574-22202:-1:exon
subclass of: SO_0000010

position:20574:-1
position: 20574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22202:-1
position: 22202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20574-22202:-1:exon

MWM05_RS12750
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 56956
locus tag: MWM05_RS12750
old locus tag: TbrSNM41_25280
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011174358.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS1634 family transposase
translation: METTPNLQVYDLGHLGLVASILDQIGLVQTVDQFVGPRPGEKVSTGMALKAAILNALGFVTSPLYLFGHFFQGKPTELLLGPGITPELLNDDRMGRMLDSLYQAGVTGLFLEIAKRARQAFPFPVRALHVDSTSFHVHGVYGSGEEGQTDTGDEPLVIRLTHGYSRDHRPDLKQWVMNLICADTGGIPLLFAPGDGNQSDQEALVSLLARYRQGLELGEVVVLDGASYSQENLGALQGFSWVMRVPATLKEARALLRKELPQEAWRPLLPGYRGLEVESEYGGVRQRWLLVESQERARMEETNLRQRIVRAEGEARKVLGRLTARTFACEADARRALSEASGRLPLHRLVYLGVQEERQWERVGRPRKGERPLAVVYRLRARLEVDEGKLERARRGLGRFLLATNVLDREGLPPQEVLRRYKDQARTVERGFRFLKDPLFFTESTFLKRPERVMALGMVMALALLVYALGEWALRRRLEGTGSSLPDQKGRPTAKPTLRWVFQLFMWVRLVELGGRWLVLNLAPHHETAVRLLGAGRYYLLE
SIO_010081: MWM05_RS12750
subclass of: SO_0000673
so part of: MWM05_RS12750
location: complement(20574..22202)
location: region:20574-22202:-1
so has part: feature:20574-22202:-1:exon

WP_244361881.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20574-22202:-1:exon

MWM05_RS12755
type: Gene
subclass of: SO_0000704
RO_0002162: 56956
locus tag: MWM05_RS12755
old locus tag: TbrSNM41_25300
so part of: sequence
location: complement(22574..24310)
location: region:22574-24310:-1
so has part: feature:22574-24310:-1:exon
subclass of: SO_0000010

position:22574:-1
position: 22574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24310:-1
position: 24310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22574-24310:-1:exon

MWM05_RS12755
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 56956
locus tag: MWM05_RS12755
old locus tag: TbrSNM41_25300
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018461836.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSFLTAYFFLTLTEIRTTSSSARQTTGFYAAEAGLNLRAEEIRQKFLGYNRPQGTSPQSNAPCQGTNQGSGDFACKTYTISGRTVRTYVREAEGNPHNITIPPGELYEYLEAQEYRYHLYSEAVGPDGRTEALLELVFKSRLVPMFQFAAFYNKDLEILPGPNMTLNGRVHTNKDLYLNSGNTLTIMGQVSTAGKLYRGRKDTNSCGGTVNIQRQAGDLAALACGSGGTRKSYTQSEVAGWGGRIQVGVDPVTVPEPEELDPTPGKTYWDKADLRIGLDLSGPTPSVKVYRVSSGQTLVDPVSTATLFVCNAVGYTLGDFHNNREGKDIKMLEVDLGKVLDCIHNNRTAFGFALDDDTEGGLVFFLTVFGPNSSGINDYGVRVKGGASLISTVSGAPRPRGLTLVSDQAVYIQGDFNRDGPDWIPAAVLADSINILSNAWSRDTLSRESLSRRQASNTEVNAAFLAGTDTTGNQEGEGGRDRGAYNGGLENYPRFHEDWSGKTLTYRGSFASLGKPRKVNGPWCGTGTGCGTAGRGIYNPPIRQWSFDSRFAQGQLPPLSPRFVYLRQERFLREFERR
SIO_010081: MWM05_RS12755
subclass of: SO_0000673
so part of: MWM05_RS12755
location: complement(22574..24310)
location: region:22574-24310:-1
so has part: feature:22574-24310:-1:exon

WP_244363987.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22574-24310:-1:exon

MWM05_RS12760
type: Gene
subclass of: SO_0000704
RO_0002162: 56956
locus tag: MWM05_RS12760
old locus tag: TbrSNM41_25310
so part of: sequence
location: complement(24376..25287)
location: region:24376-25287:-1
so has part: feature:24376-25287:-1:exon
subclass of: SO_0000010

position:24376:-1
position: 24376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25287:-1
position: 25287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24376-25287:-1:exon

MWM05_RS12760
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 56956
locus tag: MWM05_RS12760
old locus tag: TbrSNM41_25310
inference: COORDINATES: protein motif:HMM:TIGR02532.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: prepilin-type N-terminal cleavage/methylation domain-containing protein
translation: MDRKGLTLVEVLVALGIAAILMGLILPTALGNRRLYNLDVQRTGANQNLRAGLDFLVADIRQAGERLPVDFPAIEIQTDGNNSTLIIRRNLLDTALTLCDRIDGNQDNIPVAVNNRGQLNGLPADLQGVCAFRDTDGNRVDDRIDAFQAYRCSQDGDPQCRVGNDRERVRIYIYDPVNRVGEWFVYDAEDASGVKIHKGNQERWSRQYGPGSRIYVLEERKYRKDGDLLVLQENGESQGKGVVAGVVRFVAKALANNTWYNAFPTGNLDWRSIRSIEVVLRVRVGNVERELGTQAVPRNVLSY
SIO_010081: MWM05_RS12760
subclass of: SO_0000673
so part of: MWM05_RS12760
location: complement(24376..25287)
location: region:24376-25287:-1
so has part: feature:24376-25287:-1:exon

WP_244363988.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24376-25287:-1:exon