Thermus brockianus strain SNM4-1 plasmid pTbrSNM4-1b, complete sequence.
Bacteria; Deinococcota; Deinococci; Thermales; Thermaceae; Thermus.
Complete Genome Sequences of Thermus Strains Isolated from Senami Hot Spring in Japan
Microbiol Resour Announc 11 (7), e0035422 (2022)
Submitted (21-FEB-2022) Contact:Kentaro Miyazaki National Institute of Advanced Industrial Science and Technology; 1-1-1 Higashi, Tsukuba 305-8566, Japan
REFSEQ INFORMATION: The reference sequence is identical to\nAP025594.1.\nAnnotated by DFAST https://dfast.ddbj.nig.ac.jp/\n\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Unicycler v. 0.4.8\nGenome Coverage :: 214x\nSequencing Technology :: MiSeq; GridION\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 03/20/2023 11:05:28\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 2,545\nCDSs (total) :: 2,489\nGenes (coding) :: 2,439\nCDSs (with protein) :: 2,439\nGenes (RNA) :: 56\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 47\nncRNAs :: 3\nPseudo Genes (total) :: 50\nCDSs (without protein) :: 50\nPseudo Genes (ambiguous residues) :: 0 of 50\nPseudo Genes (frameshifted) :: 33 of 50\nPseudo Genes (incomplete) :: 19 of 50\nPseudo Genes (internal stop) :: 10 of 50\nPseudo Genes (multiple problems) :: 12 of 50\nCRISPR Arrays :: 7\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: similar to AA sequence:RefSeq:WP_014630557.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_018789227.1
GO:0008422 - beta-glucosidase activity [Evidence IEA]
GO:0030245 - cellulose catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012694190.1
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011229130.1
COORDINATES: similar to AA sequence:RefSeq:WP_011229129.1
COORDINATES: similar to AA sequence:RefSeq:WP_011229128.1
COORDINATES: similar to AA sequence:RefSeq:WP_018461856.1
ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_008631529.1
GO:0010468 - regulation of gene expression [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015065434.1
COORDINATES: similar to AA sequence:RefSeq:WP_020417739.1
COORDINATES: similar to AA sequence:RefSeq:WP_015065432.1
branched-chain amino acid ABC transporter permease
COORDINATES: similar to AA sequence:RefSeq:WP_014514501.1
COORDINATES: similar to AA sequence:RefSeq:WP_015065430.1
COORDINATES: similar to AA sequence:RefSeq:WP_015065429.1
COORDINATES: similar to AA sequence:RefSeq:WP_015065428.1
COORDINATES: similar to AA sequence:RefSeq:WP_014514505.1
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014630489.1
GO:0016627 - oxidoreductase activity, acting on the CH-CH group of donors [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011229262.1
COORDINATES: similar to AA sequence:RefSeq:WP_014630487.1
COORDINATES: similar to AA sequence:RefSeq:WP_020748174.1
COORDINATES: similar to AA sequence:RefSeq:WP_015065422.1
GO:0005215 - transporter activity [Evidence IEA]
TAXI family TRAP transporter solute-binding subunit
COORDINATES: similar to AA sequence:RefSeq:WP_018111801.1
COORDINATES: similar to AA sequence:RefSeq:WP_019551463.1
GO:0004521 - endoribonuclease activity [Evidence IEA]
GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013703769.1
GO:0003674 - molecular_function [Evidence IEA]
type I-E CRISPR-associated protein Cse1/CasA
COORDINATES: protein motif:HMM:TIGR02548.1
type I-E CRISPR-associated protein Cse2/CasB
COORDINATES: similar to AA sequence:RefSeq:WP_011229114.1
type I-E CRISPR-associated protein Cas7/Cse4/CasC
COORDINATES: similar to AA sequence:RefSeq:WP_015717144.1
type I-E CRISPR-associated protein Cas5/CasD
COORDINATES: similar to AA sequence:RefSeq:WP_015717143.1
type I-E CRISPR-associated protein Cas6/Cse3/CasE
COORDINATES: similar to AA sequence:RefSeq:WP_018111808.1
GO:0004520 - endodeoxyribonuclease activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
GO:0051607 - defense response to virus [Evidence IEA]; GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
type I-E CRISPR-associated endonuclease Cas1e
COORDINATES: similar to AA sequence:RefSeq:WP_018111809.1
type I-E CRISPR-associated endoribonuclease Cas2e
COORDINATES: similar to AA sequence:RefSeq:WP_018111027.1
COORDINATES: similar to AA sequence:RefSeq:WP_014514714.1
nitrous oxide reductase accessory protein NosL
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_018111029.1
COORDINATES: similar to AA sequence:RefSeq:WP_018111030.1
COORDINATES: similar to AA sequence:RefSeq:WP_018111031.1
COORDINATES: protein motif:HMM:NF014542.2
COORDINATES: similar to AA sequence:RefSeq:WP_011174358.1
GO:0004803 - transposase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004628264.1
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_014630543.1
COORDINATES: similar to AA sequence:RefSeq:WP_015065359.1
COORDINATES: similar to AA sequence:RefSeq:WP_016329591.1
metal ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_011229222.1
GO:0016791 - phosphatase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015716585.1
COORDINATES: similar to AA sequence:RefSeq:WP_011229196.1
COORDINATES: similar to AA sequence:RefSeq:WP_011229195.1
helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_016329377.1
COORDINATES: similar to AA sequence:RefSeq:WP_018462057.1
phytoene/squalene synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014515419.1
COORDINATES: similar to AA sequence:RefSeq:WP_014515417.1
GO:0020037 - heme binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014630567.1
lycopene cyclase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014515415.1
lysophospholipid acyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_016329384.1
COORDINATES: similar to AA sequence:RefSeq:WP_008631494.1
GO:0016166 - phytoene dehydrogenase activity [Evidence IEA]
GO:0016117 - carotenoid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011229187.1
GO:0004452 - isopentenyl-diphosphate delta-isomerase activity [Evidence IEA]
GO:0008299 - isoprenoid biosynthetic process [Evidence IEA]
type 2 isopentenyl-diphosphate Delta-isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_019551365.1
COORDINATES: similar to AA sequence:RefSeq:WP_011229124.1
COORDINATES: similar to AA sequence:RefSeq:WP_018461538.1
COORDINATES: similar to AA sequence:RefSeq:WP_011174434.1
COORDINATES: similar to AA sequence:RefSeq:WP_011229121.1
COORDINATES: similar to AA sequence:RefSeq:WP_018112466.1
DUF523 and DUF1722 domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014511223.1
GO:0050611 - arsenate reductase (azurin) activity [Evidence IEA]
internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
arsenate reductase (azurin) large subunit
COORDINATES: similar to AA sequence:RefSeq:WP_015717355.1
arsenate reductase (azurin) small subunit
COORDINATES: similar to AA sequence:RefSeq:WP_003048699.1
COORDINATES: similar to AA sequence:RefSeq:WP_014516038.1
COORDINATES: protein motif:HMM:NF022182.2
COORDINATES: similar to AA sequence:RefSeq:WP_003047992.1
COORDINATES: similar to AA sequence:RefSeq:WP_011173080.1
COORDINATES: similar to AA sequence:RefSeq:WP_014515536.1
COORDINATES: similar to AA sequence:RefSeq:WP_011173081.1
COORDINATES: similar to AA sequence:RefSeq:WP_018110568.1
COORDINATES: similar to AA sequence:RefSeq:WP_014511077.1
COORDINATES: similar to AA sequence:RefSeq:WP_014632306.1
COORDINATES: similar to AA sequence:RefSeq:WP_018110666.1
helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_014511083.1
sigma-70 family RNA polymerase sigma factor
COORDINATES: similar to AA sequence:RefSeq:WP_018110668.1
COORDINATES: similar to AA sequence:RefSeq:WP_013457029.1
GO:0042242 - cobyrinic acid a,c-diamide synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008631380.1
GO:0008817 - corrinoid adenosyltransferase activity [Evidence IEA]
GO:0009236 - cobalamin biosynthetic process [Evidence IEA]
cob(I)yrinic acid a,c-diamide adenosyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_018110944.1
adenosylcobinamide-GDP ribazoletransferase
COORDINATES: similar to AA sequence:RefSeq:WP_013457046.1
GO:0008939 - nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity [Evidence IEA]
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_008631398.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00174
cobalamin riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_014630526.1
COORDINATES: similar to AA sequence:RefSeq:WP_008631402.1
GO:0008168 - methyltransferase activity [Evidence IEA]
cobalt-precorrin-5B (C(1))-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_014630527.1
COORDINATES: similar to AA sequence:RefSeq:WP_008631406.1
GO:0046025 - precorrin-6Y C5,15-methyltransferase (decarboxylating) activity [Evidence IEA]
GO:0046140 - corrin biosynthetic process [Evidence IEA]
precorrin-6y C5,15-methyltransferase (decarboxylating) subunit CbiE
COORDINATES: similar to AA sequence:RefSeq:WP_015065304.1
COORDINATES: similar to AA sequence:RefSeq:WP_014630530.1
cobalt-precorrin-4/precorrin-4 C(11)-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_014630531.1
GO:0030789 - precorrin-3B C17-methyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003045512.1
COORDINATES: similar to AA sequence:RefSeq:WP_003045510.1
GO:0016829 - lyase activity [Evidence IEA]
CbiX/SirB N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008631423.1
COORDINATES: similar to AA sequence:RefSeq:WP_008631424.1
GO:0004851 - uroporphyrin-III C-methyltransferase activity [Evidence IEA]
GO:0019354 - siroheme biosynthetic process [Evidence IEA]
uroporphyrinogen-III C-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_019550888.1
GO:0016880 - acid-ammonia (or amide) ligase activity [Evidence IEA]
adenosylcobinamide-phosphate synthase CbiB
COORDINATES: similar to AA sequence:RefSeq:WP_018461819.1
COORDINATES: similar to AA sequence:RefSeq:WP_014630539.1
GO:0003824 - catalytic activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016329670.1
COORDINATES: similar to AA sequence:RefSeq:WP_014629855.1
COORDINATES: similar to AA sequence:RefSeq:WP_018462071.1
COORDINATES: similar to AA sequence:RefSeq:WP_014515436.1
COORDINATES: similar to AA sequence:RefSeq:WP_014630514.1
nucleotidyltransferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012844103.1
COORDINATES: similar to AA sequence:RefSeq:WP_016329664.1
SDR family NAD(P)-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_014629848.1
COORDINATES: similar to AA sequence:RefSeq:WP_018112483.1
COORDINATES: protein motif:HMM:NF015789.2
GO:0004518 - nuclease activity [Evidence IEA]
GO:0006281 - DNA repair [Evidence IEA]; GO:0009650 - UV protection [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011174478.1
internal stop; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF017885.2
COORDINATES: similar to AA sequence:RefSeq:WP_014629794.1
COORDINATES: similar to AA sequence:RefSeq:WP_014510147.1
COORDINATES: similar to AA sequence:RefSeq:WP_019551709.1
COORDINATES: similar to AA sequence:RefSeq:WP_013159061.1
GO:0015074 - DNA integration [Evidence IEA]
frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
integrase core domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011956617.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
GO:0006304 - DNA modification [Evidence IEA]
Eco57I restriction-modification methylase domain-containing protein
COORDINATES: protein motif:HMM:NF012403.2
COORDINATES: protein motif:HMM:NF033545.0
COORDINATES: similar to AA sequence:RefSeq:WP_019551665.1
winged helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014514556.1
GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
ParB/RepB/Spo0J family partition protein
COORDINATES: similar to AA sequence:RefSeq:WP_019551580.1
COORDINATES: similar to AA sequence:RefSeq:WP_007080148.1
COORDINATES: similar to AA sequence:RefSeq:WP_013702994.1
CRISPR system precrRNA processing endoribonuclease RAMP protein Cas6
COORDINATES: similar to AA sequence:RefSeq:WP_014515729.1
type III-A CRISPR-associated protein Cas10/Csm1
COORDINATES: similar to AA sequence:RefSeq:WP_018461515.1
type III-A CRISPR-associated protein Csm2
COORDINATES: similar to AA sequence:RefSeq:WP_018110626.1
type III-A CRISPR-associated RAMP protein Csm3
COORDINATES: similar to AA sequence:RefSeq:WP_011229150.1
COORDINATES: similar to AA sequence:RefSeq:WP_018466917.1
type III-A CRISPR-associated RAMP protein Csm5
COORDINATES: protein motif:HMM:NF021006.2
TIGR02221 family CRISPR-associated protein
COORDINATES: similar to AA sequence:RefSeq:WP_011174463.1
COORDINATES: similar to AA sequence:RefSeq:WP_011228296.1
COORDINATES: similar to AA sequence:RefSeq:WP_014515737.1
GO:0004520 - endodeoxyribonuclease activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016329085.1
TIGR02710 family CRISPR-associated CARF protein
COORDINATES: similar to AA sequence:RefSeq:WP_014514541.1
COORDINATES: similar to AA sequence:RefSeq:WP_013704689.1
COORDINATES: similar to AA sequence:RefSeq:WP_011174449.1
type III-B CRISPR-associated protein Cas10/Cmr2
COORDINATES: similar to AA sequence:RefSeq:WP_011174448.1
type III-B CRISPR module-associated protein Cmr3
COORDINATES: similar to AA sequence:RefSeq:WP_014514646.1
type III-B CRISPR module RAMP protein Cmr1
COORDINATES: similar to AA sequence:RefSeq:WP_014514645.1
type III-B CRISPR module RAMP protein Cmr4
COORDINATES: similar to AA sequence:RefSeq:WP_011174445.1
type III-B CRISPR module-associated protein Cmr5
COORDINATES: similar to AA sequence:RefSeq:WP_014514643.1
type III-B CRISPR module RAMP protein Cmr6
COORDINATES: similar to AA sequence:RefSeq:WP_013158416.1
COORDINATES: similar to AA sequence:RefSeq:WP_003045460.1
GO:0004520 - endodeoxyribonuclease activity [Evidence IEA]
type I-B CRISPR-associated endonuclease Cas1b
COORDINATES: similar to AA sequence:RefSeq:WP_003045458.1
COORDINATES: similar to AA sequence:RefSeq:WP_003045456.1
COORDINATES: similar to AA sequence:RefSeq:WP_014514654.1
COORDINATES: similar to AA sequence:RefSeq:WP_003045452.1
COORDINATES: similar to AA sequence:RefSeq:WP_003045450.1
type I-B CRISPR-associated protein Cas7/Csh2
COORDINATES: similar to AA sequence:RefSeq:WP_014514657.1
COORDINATES: similar to AA sequence:RefSeq:WP_014514658.1
COORDINATES: similar to AA sequence:RefSeq:WP_013158880.1
COORDINATES: protein motif:HMM:TIGR00305.1
GO:0004521 - endoribonuclease activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
putative toxin-antitoxin system toxin component, PIN family
COORDINATES: similar to AA sequence:RefSeq:WP_013013698.1
COORDINATES: similar to AA sequence:RefSeq:WP_014630446.1
COORDINATES: similar to AA sequence:RefSeq:WP_014511141.1
GO:0005886 - plasma membrane [Evidence IEA]; GO:0031317 - tripartite ATP-independent periplasmic transporter complex [Evidence IEA]
GO:0015556 - C4-dicarboxylate transmembrane transporter activity [Evidence IEA]
GO:0015740 - C4-dicarboxylate transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013014328.1
COORDINATES: similar to AA sequence:RefSeq:WP_014511139.1
TRAP transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_015716963.1
COORDINATES: similar to AA sequence:RefSeq:WP_015065412.1
COORDINATES: similar to AA sequence:RefSeq:WP_014630452.1
COORDINATES: similar to AA sequence:RefSeq:WP_018112003.1
GO:0051920 - peroxiredoxin activity [Evidence IEA]
This protein belongs to a clade of uncharacterized proteins related to peroxidases such as the alkylhydroperoxidase AhpD.; This protein belongs to a clade of uncharacterized proteins related to peroxidases such as the alkylhydroperoxidase AhpD; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_015716967.1
COORDINATES: similar to AA sequence:RefSeq:WP_018112005.1
COORDINATES: similar to AA sequence:RefSeq:WP_013014092.1
COORDINATES: protein motif:HMM:NF038011.1
GO:0016757 - glycosyltransferase activity [Evidence IEA]
dockerin type I repeat-containing protein
COORDINATES: protein motif:HMM:NF018190.2
GO:0030246 - carbohydrate binding [Evidence IEA]; GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
GO:0016052 - carbohydrate catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014511167.1
COORDINATES: similar to AA sequence:RefSeq:WP_014515679.1
COORDINATES: similar to AA sequence:RefSeq:WP_014511165.1
COORDINATES: similar to AA sequence:RefSeq:WP_014511382.1
COORDINATES: similar to AA sequence:RefSeq:WP_018461885.1
COORDINATES: similar to AA sequence:RefSeq:WP_007546976.1
COORDINATES: similar to AA sequence:RefSeq:WP_018461882.1
COORDINATES: similar to AA sequence:RefSeq:WP_018112018.1
CoA-acylating methylmalonate-semialdehyde dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_014511163.1
COORDINATES: similar to AA sequence:RefSeq:WP_011174534.1
GO:0008448 - N-acetylglucosamine-6-phosphate deacetylase activity [Evidence IEA]
GO:0006040 - amino sugar metabolic process [Evidence IEA]
N-acetylglucosamine-6-phosphate deacetylase
COORDINATES: protein motif:HMM:NF012551.2
COORDINATES: protein motif:HMM:NF012377.2
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
GO:0071704 - organic substance metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024808.2
COORDINATES: protein motif:HMM:NF012738.2
COORDINATES: similar to AA sequence:RefSeq:WP_013177742.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009897 - external side of plasma membrane [Evidence IEA]; GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO:0015614 - ABC-type D-xylose transporter activity [Evidence IEA]; GO:0033222 - xylose binding [Evidence IEA]
GO:0015753 - D-xylose transmembrane transport [Evidence IEA]
D-xylose ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF014684.2
COORDINATES: similar to AA sequence:RefSeq:WP_016329523.1
ATP-binding cassette domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_016329522.1
COORDINATES: similar to AA sequence:RefSeq:WP_014677651.1
GO:0009045 - xylose isomerase activity [Evidence IEA]
GO:0042732 - D-xylose metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016329520.1
GO:0005515 - protein binding [Evidence IEA]; GO:0004856 - xylulokinase activity [Evidence IEA]
GO:0042732 - D-xylose metabolic process [Evidence IEA]; GO:0005997 - xylulose metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016329519.1
COORDINATES: similar to AA sequence:RefSeq:WP_013702985.1
COORDINATES: similar to AA sequence:RefSeq:WP_008630619.1
IS5-like element ISTth7 family transposase
COORDINATES: similar to AA sequence:RefSeq:WP_018466278.1
COORDINATES: similar to AA sequence:RefSeq:WP_011229085.1
COORDINATES: similar to AA sequence:RefSeq:WP_015065345.1
hemin ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_011229087.1
COORDINATES: similar to AA sequence:RefSeq:WP_011229088.1
COORDINATES: similar to AA sequence:RefSeq:WP_011229089.1
COORDINATES: similar to AA sequence:RefSeq:WP_011174391.1
iron-siderophore ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_011174392.1
COORDINATES: similar to AA sequence:RefSeq:WP_011229091.1
COORDINATES: similar to AA sequence:RefSeq:WP_018110948.1
COORDINATES: similar to AA sequence:RefSeq:WP_015065334.1
ribonucleotide-diphosphate reductase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_018461846.1
GO:0004748 - ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor [Evidence IEA]
ribonucleoside-diphosphate reductase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_018110378.1
COORDINATES: similar to AA sequence:RefSeq:WP_014511274.1
GO:0008254 - 3'-nucleotidase activity [Evidence IEA]; GO:0008253 - 5'-nucleotidase activity [Evidence IEA]
GO:0006950 - response to stress [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014515551.1
COORDINATES: similar to AA sequence:RefSeq:WP_018461841.1
COORDINATES: similar to AA sequence:RefSeq:WP_014515553.1
COORDINATES: similar to AA sequence:RefSeq:WP_014515557.1
sugar phosphate isomerase/epimerase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014514485.1
COORDINATES: protein motif:HMM:NF013704.2
COORDINATES: similar to AA sequence:RefSeq:WP_018052901.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018460509.1
AbrB/MazE/SpoVT family DNA-binding domain-containing protein
COORDINATES: protein motif:HMM:NF013970.2
COORDINATES: similar to AA sequence:RefSeq:WP_014511090.1
COORDINATES: similar to AA sequence:RefSeq:WP_014511089.1
COORDINATES: similar to AA sequence:RefSeq:WP_014630469.1
COORDINATES: similar to AA sequence:RefSeq:WP_013159715.1
COORDINATES: protein motif:HMM:NF037830.2
COORDINATES: protein motif:HMM:NF016167.2
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_012694773.1
GO:0009360 - DNA polymerase III complex [Evidence IEA]
GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014632320.1
COORDINATES: similar to AA sequence:RefSeq:WP_013159690.1
GO:0004386 - helicase activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013159689.1
COORDINATES: similar to AA sequence:RefSeq:WP_019551601.1
COORDINATES: similar to AA sequence:RefSeq:WP_003048862.1
COORDINATES: similar to AA sequence:RefSeq:WP_003049652.1
COORDINATES: protein motif:HMM:NF014069.2
COORDINATES: protein motif:HMM:NF012772.2
COORDINATES: similar to AA sequence:RefSeq:WP_015717093.1
COORDINATES: similar to AA sequence:RefSeq:WP_013456802.1
COORDINATES: similar to AA sequence:RefSeq:WP_015065393.1
COORDINATES: protein motif:HMM:NF013757.2
IclR family transcriptional regulator C-terminal domain-containing protein
COORDINATES: protein motif:HMM:TIGR00254.1
GO:0005515 - protein binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014511346.1
COORDINATES: protein motif:HMM:NF019843.2
COORDINATES: similar to AA sequence:RefSeq:WP_014299871.1
incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
amino acid ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_014516453.1
COORDINATES: similar to AA sequence:RefSeq:WP_014511107.1
type II toxin-antitoxin system VapC family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_008633599.1
COORDINATES: protein motif:HMM:NF026220.2
COORDINATES: similar to AA sequence:RefSeq:WP_018467608.1
COORDINATES: similar to AA sequence:RefSeq:WP_013012598.1
COORDINATES: similar to AA sequence:RefSeq:WP_018461194.1
COORDINATES: similar to AA sequence:RefSeq:WP_014514565.1
COORDINATES: similar to AA sequence:RefSeq:WP_014514564.1
COORDINATES: protein motif:HMM:NF012632.2
COORDINATES: similar to AA sequence:RefSeq:WP_011174364.1
COORDINATES: similar to AA sequence:RefSeq:WP_014511375.1
COORDINATES: similar to AA sequence:RefSeq:WP_014511014.1
COORDINATES: similar to AA sequence:RefSeq:WP_013013174.1
COORDINATES: similar to AA sequence:RefSeq:WP_013013173.1
COORDINATES: protein motif:HMM:NF013561.2
COORDINATES: similar to AA sequence:RefSeq:WP_014511153.1
DNA methylase N-4/N-6 domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014511275.1
COORDINATES: protein motif:HMM:NF012722.2
HAMP domain-containing sensor histidine kinase
COORDINATES: protein motif:HMM:NF012698.2
COORDINATES: similar to AA sequence:RefSeq:WP_015717030.1
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015717611.1
nitrate/sulfonate/bicarbonate ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_014515727.1
COORDINATES: protein motif:HMM:NF013740.2
COORDINATES: protein motif:HMM:NF018933.2
COORDINATES: similar to AA sequence:RefSeq:WP_014630602.1
COORDINATES: similar to AA sequence:RefSeq:WP_018461957.1
COORDINATES: similar to AA sequence:RefSeq:WP_014511263.1
LacI family DNA-binding transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_014630555.1
sugar ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_014630556.1