Streptococcus suis BM407 plasmid pBM407, complete sequence.
Bacteria; Bacillota; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.
Rapid evolution of virulence and drug resistance in the emerging zoonotic pathogen Streptococcus suis
Submitted (20-OCT-2008) Holden M.T.G., Pathogen Sequencing Unit, The Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, CB10 1SA, UNITED KINGDOM
REFSEQ INFORMATION: The reference sequence is identical to\nFM252033.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 03/12/2023 11:07:35\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 2,135\nCDSs (total) :: 2,063\nGenes (coding) :: 2,000\nCDSs (with protein) :: 2,000\nGenes (RNA) :: 72\nrRNAs :: 4, 4, 4 (5S, 16S, 23S)\ncomplete rRNAs :: 4, 4, 4 (5S, 16S, 23S)\ntRNAs :: 56\nncRNAs :: 4\nPseudo Genes (total) :: 63\nCDSs (without protein) :: 63\nPseudo Genes (ambiguous residues) :: 0 of 63\nPseudo Genes (frameshifted) :: 35 of 63\nPseudo Genes (incomplete) :: 28 of 63\nPseudo Genes (internal stop) :: 11 of 63\nPseudo Genes (multiple problems) :: 10 of 63\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: similar to AA sequence:RefSeq:WP_002355409.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_002401482.1
COORDINATES: similar to AA sequence:RefSeq:WP_002333002.1
COORDINATES: similar to AA sequence:RefSeq:WP_010782381.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_064305258.1
GO:0004803 - transposase activity [Evidence IEA]
IS6-like element IS1216 family transposase
COORDINATES: similar to AA sequence:RefSeq:WP_018380718.1
COORDINATES: similar to AA sequence:RefSeq:WP_012774870.1
LytTR family DNA-binding domain-containing protein
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_012774871.1
COORDINATES: similar to AA sequence:RefSeq:WP_002943500.1
primase C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_018372616.1
helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_001180497.1
class IIb bacteriocin, lactobin A/cerein 7B family
COORDINATES: similar to AA sequence:RefSeq:WP_000180829.1
COORDINATES: similar to AA sequence:RefSeq:WP_004181943.1
COORDINATES: similar to AA sequence:RefSeq:WP_000180816.1
COORDINATES: protein motif:HMM:TIGR03949.1
COORDINATES: similar to AA sequence:RefSeq:WP_003080524.1
COORDINATES: similar to AA sequence:RefSeq:WP_000180826.1
COORDINATES: similar to AA sequence:RefSeq:WP_002943485.1
nucleotidyl transferase AbiEii/AbiGii toxin family protein
COORDINATES: similar to AA sequence:RefSeq:WP_002943483.1
COORDINATES: similar to AA sequence:RefSeq:WP_014638042.1
GO:0003678 - DNA helicase activity [Evidence IEA]; GO:0016818 - hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides [Evidence IEA]
GO:0000724 - double-strand break repair via homologous recombination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015646904.1
COORDINATES: protein motif:HMM:NF018196.2
COORDINATES: similar to AA sequence:RefSeq:WP_000108743.1
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.