Syntrophus aciditrophicus SB, complete sequence.
Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophales; Syntrophaceae; Syntrophus.
The genome of Syntrophus aciditrophicus: life at the thermodynamic limit of microbial growth
The genome of the syntrophic bacterium Syntrophus aciditrophicus: Life dependent on negative change in electrical potential
Submitted (28-NOV-2012) Departement of Microbiology and Plant Biology, University of Oklahoma, 770 VanVleet Oval, Norman, OK 73019, USA
Submitted (05-JAN-2006) Integrated Genomics, 2201 West Campbell Park Drive, Chicago, IL 60612, USA
REFSEQ INFORMATION: The reference sequence is identical to\nCP000252.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 08/21/2022 09:02:31\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.2\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;\n repeat_region\nGenes (total) :: 2,939\nCDSs (total) :: 2,883\nGenes (coding) :: 2,854\nCDSs (with protein) :: 2,854\nGenes (RNA) :: 56\nrRNAs :: 1, 1, 1 (5S, 16S, 23S)\ncomplete rRNAs :: 1, 1, 1 (5S, 16S, 23S)\ntRNAs :: 49\nncRNAs :: 4\nPseudo Genes (total) :: 29\nCDSs (without protein) :: 29\nPseudo Genes (ambiguous residues) :: 0 of 29\nPseudo Genes (frameshifted) :: 9 of 29\nPseudo Genes (incomplete) :: 19 of 29\nPseudo Genes (internal stop) :: 2 of 29\nPseudo Genes (multiple problems) :: 1 of 29\nCRISPR Arrays :: 2\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
type strain of Syntrophus aciditrophicus
COORDINATES: ab initio prediction:GeneMarkS-2+
GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
ParB/RepB/Spo0J family partition protein
COORDINATES: similar to AA sequence:RefSeq:WP_000428021.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003688 - DNA replication origin binding [Evidence IEA]
GO:0006270 - DNA replication initiation [Evidence IEA]; GO:0006275 - regulation of DNA replication [Evidence IEA]
Derived by automated computational analysis using gene prediction method: Protein Homology.
chromosomal replication initiator protein DnaA
COORDINATES: protein motif:HMM:TIGR00663.1
GO:0009360 - DNA polymerase III complex [Evidence IEA]
GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013705485.1
GO:0009330 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex [Evidence IEA]
GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO:0006265 - DNA topological change [Evidence IEA]
DNA topoisomerase (ATP-hydrolyzing) subunit B
COORDINATES: similar to AA sequence:RefSeq:WP_003244540.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003916 - DNA topoisomerase activity [Evidence IEA]; GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO:0006259 - DNA metabolic process [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]
COORDINATES: protein motif:HMM:NF014058.2
COORDINATES: similar to AA sequence:RefSeq:WP_014811961.1
COORDINATES: protein motif:HMM:NF019976.2
COORDINATES: similar to AA sequence:RefSeq:WP_004282265.1
COORDINATES: protein motif:HMM:NF025864.2
PmeII family type II restriction endonuclease
COORDINATES: similar to AA sequence:RefSeq:WP_003114812.1
GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]
GO:0000413 - protein peptidyl-prolyl isomerization [Evidence IEA]
COORDINATES: protein motif:HMM:NF024881.2
COORDINATES: protein motif:HMM:NF019265.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
sigma-70 family RNA polymerase sigma factor
COORDINATES: protein motif:HMM:NF025141.2
COORDINATES: protein motif:HMM:NF024109.2
COORDINATES: protein motif:HMM:NF019349.2
COORDINATES: protein motif:HMM:NF024938.2
COORDINATES: protein motif:HMM:NF024773.2
COORDINATES: protein motif:HMM:NF024994.2
COORDINATES: protein motif:HMM:NF015069.2
GO:0016021 - integral component of membrane [Evidence IEA]
COORDINATES: protein motif:HMM:NF016291.2
tellurite resistance TerB family protein
COORDINATES: protein motif:HMM:NF012570.2
COORDINATES: protein motif:HMM:NF025124.2
helix-turn-helix domain-containing protein
COORDINATES: protein motif:HMM:NF016358.2
Swt1 family HEPN domain-containing protein
COORDINATES: protein motif:HMM:NF025468.2
COORDINATES: protein motif:HMM:NF024700.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF018357.2
COORDINATES: protein motif:HMM:NF014599.2
GO:0051082 - unfolded protein binding [Evidence IEA]
GO:0051262 - protein tetramerization [Evidence IEA]; GO:0015031 - protein transport [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03830.1
type II toxin-antitoxin system MqsA family antitoxin
COORDINATES: protein motif:HMM:NF027059.2
type II toxin-antitoxin system MqsR family toxin
COORDINATES: protein motif:HMM:NF012403.2
COORDINATES: protein motif:HMM:NF014534.2
GO:0044238 - primary metabolic process [Evidence IEA]
HPF/RaiA family ribosome-associated protein
COORDINATES: protein motif:HMM:NF014543.2
COORDINATES: protein motif:HMM:NF012678.2
iron-containing alcohol dehydrogenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013705641.1
COORDINATES: similar to AA sequence:RefSeq:WP_014812607.1
COORDINATES: similar to AA sequence:RefSeq:WP_014810537.1
COORDINATES: similar to AA sequence:RefSeq:WP_013705638.1
GO:0005215 - transporter activity [Evidence IEA]
efflux RND transporter periplasmic adaptor subunit
COORDINATES: protein motif:HMM:NF008035.0
GO:0005515 - protein binding [Evidence IEA]
GO:0006457 - protein folding [Evidence IEA]; GO:0009408 - response to heat [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005920153.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
GO:0006457 - protein folding [Evidence IEA]
60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_004628765.1
COORDINATES: similar to AA sequence:RefSeq:WP_011417620.1
COORDINATES: protein motif:HMM:NF012241.2
COORDINATES: protein motif:HMM:NF015679.2
GO:0016740 - transferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013827.2
rhomboid family intramembrane serine protease
COORDINATES: protein motif:HMM:NF012301.2
COORDINATES: protein motif:HMM:NF013088.2
COORDINATES: protein motif:HMM:NF024831.2
COORDINATES: protein motif:HMM:TIGR02605.1
COORDINATES: protein motif:HMM:NF013594.2
COORDINATES: protein motif:HMM:NF012492.2
COORDINATES: protein motif:HMM:NF006396.0
bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase
COORDINATES: similar to AA sequence:RefSeq:WP_013706478.1
COORDINATES: protein motif:HMM:TIGR00229.1
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
COORDINATES: protein motif:HMM:NF020252.2
COORDINATES: similar to AA sequence:RefSeq:WP_013707418.1
GO:0008837 - diaminopimelate epimerase activity [Evidence IEA]
GO:0009089 - lysine biosynthetic process via diaminopimelate [Evidence IEA]
COORDINATES: protein motif:HMM:NF006756.0
COORDINATES: protein motif:HMM:NF017847.2
COORDINATES: protein motif:HMM:NF027971.2
COORDINATES: protein motif:HMM:NF024503.2
COORDINATES: protein motif:HMM:NF008113.2
GO:0008251 - tRNA-specific adenosine deaminase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0002100 - tRNA wobble adenosine to inosine editing [Evidence IEA]
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
signal recognition particle sRNA small type
COORDINATES: nucleotide motif:Rfam:14.4:RF00169
Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF004046.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002107277.1
GO:0008150 - biological_process [Evidence IEA]
YbaB/EbfC family nucleoid-associated protein
COORDINATES: similar to AA sequence:RefSeq:WP_011415994.1
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013706635.1
GO:0016829 - lyase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013706634.1
GO:0016836 - hydro-lyase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013706325.1
2-oxoacid:acceptor oxidoreductase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014813281.1
COORDINATES: similar to AA sequence:RefSeq:WP_013706323.1
2-ketoisovalerate ferredoxin oxidoreductase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_013706322.1
GO:0019164 - pyruvate synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF005722.0
GO:0016491 - oxidoreductase activity [Evidence IEA]
NADH-quinone oxidoreductase subunit NuoE
COORDINATES: similar to AA sequence:RefSeq:WP_014810568.1
COORDINATES: similar to AA sequence:RefSeq:WP_013706319.1
2Fe-2S iron-sulfur cluster-binding protein
COORDINATES: protein motif:HMM:TIGR03144.1
GO:0020037 - heme binding [Evidence IEA]
GO:0017004 - cytochrome complex assembly [Evidence IEA]
c-type cytochrome biogenesis protein CcsB
COORDINATES: protein motif:HMM:NF016995.2
COORDINATES: protein motif:HMM:NF025890.2
COORDINATES: protein motif:HMM:NF012790.2
rhodanese-like domain-containing protein
COORDINATES: protein motif:HMM:NF012804.2
class II aldolase/adducin family protein
COORDINATES: protein motif:HMM:NF013481.2
aldehyde ferredoxin oxidoreductase family protein
COORDINATES: protein motif:HMM:NF013358.2
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF013933.2
COORDINATES: protein motif:HMM:TIGR02176.1
GO:0005506 - iron ion binding [Evidence IEA]; GO:0016903 - oxidoreductase activity, acting on the aldehyde or oxo group of donors [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
GO:0022900 - electron transport chain [Evidence IEA]
pyruvate:ferredoxin (flavodoxin) oxidoreductase
pyruvate formate lyase family activating protein
COORDINATES: protein motif:HMM:TIGR00437.1
GO:0015093 - ferrous iron transmembrane transporter activity [Evidence IEA]
GO:0006826 - iron ion transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF013980.2
SprT family zinc-dependent metalloprotease
COORDINATES: similar to AA sequence:RefSeq:WP_013705020.1
COORDINATES: similar to AA sequence:RefSeq:WP_018900556.1
COORDINATES: protein motif:HMM:NF024583.2
COORDINATES: similar to AA sequence:RefSeq:WP_014809355.1
sigma-54 dependent transcriptional regulator
COORDINATES: protein motif:HMM:NF025173.2
Spy/CpxP family protein refolding chaperone
COORDINATES: protein motif:HMM:NF012905.2
COORDINATES: protein motif:HMM:NF028488.2
4Fe-4S dicluster domain-containing protein
COORDINATES: protein motif:HMM:NF012402.2
COORDINATES: protein motif:HMM:NF013242.2
COORDINATES: protein motif:HMM:NF012592.2
COORDINATES: protein motif:HMM:TIGR00072.1
hydrogenase 3 maturation endopeptidase HyCI
COORDINATES: protein motif:HMM:NF012235.2
phosphate ABC transporter ATP-binding protein
COORDINATES: protein motif:HMM:NF012738.2
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0005887 - integral component of plasma membrane [Evidence IEA]
GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02138.1
phosphate ABC transporter permease subunit PstC
COORDINATES: protein motif:HMM:TIGR02136.1
phosphate ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF013429.2
COORDINATES: protein motif:HMM:NF013811.2
COORDINATES: protein motif:HMM:NF011071.0
GO:0003824 - catalytic activity [Evidence IEA]
GO:0005992 - trehalose biosynthetic process [Evidence IEA]
bifunctional alpha,alpha-trehalose-phosphate synthase (UDP-forming)/trehalose-phosphatase
nicotinate-nucleotide adenylyltransferase
COORDINATES: protein motif:HMM:NF024634.2
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF014692.2
COORDINATES: similar to AA sequence:RefSeq:WP_015618005.1
CoB--CoM heterodisulfide reductase iron-sulfur subunit A family protein
COORDINATES: similar to AA sequence:RefSeq:WP_257395006.1
COORDINATES: similar to AA sequence:RefSeq:WP_013706032.1
GO:0009326 - formate dehydrogenase complex [Evidence IEA]
GO:0008863 - formate dehydrogenase (NAD+) activity [Evidence IEA]
GO:0015942 - formate metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF010120.0
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0010181 - FMN binding [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]; GO:0008137 - NADH dehydrogenase (ubiquinone) activity [Evidence IEA]
NADH-quinone oxidoreductase subunit NuoF
COORDINATES: similar to AA sequence:RefSeq:WP_011418266.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0008863 - formate dehydrogenase (NAD+) activity [Evidence IEA]
GO:0009061 - anaerobic respiration [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011418265.1
COORDINATES: similar to AA sequence:RefSeq:WP_014810145.1
COORDINATES: protein motif:HMM:NF016131.2
formate dehydrogenase accessory protein FdhE
COORDINATES: protein motif:HMM:NF014693.2
COORDINATES: similar to AA sequence:RefSeq:WP_011418790.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]
GO:0006777 - Mo-molybdopterin cofactor biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014069.2
COORDINATES: protein motif:HMM:NF014448.2
molybdenum cofactor biosynthesis protein MoaE
COORDINATES: protein motif:HMM:NF025670.2
COORDINATES: protein motif:HMM:NF024138.2
helix-turn-helix transcriptional regulator
COORDINATES: protein motif:HMM:NF012899.2
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF024257.2
substrate-binding domain-containing protein
COORDINATES: protein motif:HMM:NF024921.2
COORDINATES: protein motif:HMM:NF014097.2
NrpR regulatory domain-containing protein
COORDINATES: protein motif:HMM:NF013784.2
GO:0015930 - glutamate synthase activity [Evidence IEA]; GO:0016638 - oxidoreductase activity, acting on the CH-NH2 group of donors [Evidence IEA]
GO:0006537 - glutamate biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013491.2
PEP/pyruvate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_016290282.1
GO:0016639 - oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor [Evidence IEA]
GO:0006520 - cellular amino acid metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014567.2
PAS domain-containing hybrid sensor histidine kinase/response regulator
COORDINATES: similar to AA sequence:RefSeq:WP_011416088.1
GO:0008914 - leucyltransferase activity [Evidence IEA]
leucyl/phenylalanyl-tRNA--protein transferase
COORDINATES: protein motif:HMM:TIGR02639.1
GO:0009368 - endopeptidase Clp complex [Evidence IEA]
GO:0004176 - ATP-dependent peptidase activity [Evidence IEA]
GO:0043335 - protein unfolding [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
ATP-dependent Clp protease ATP-binding subunit ClpA
COORDINATES: similar to AA sequence:RefSeq:WP_011416090.1
COORDINATES: similar to AA sequence:RefSeq:WP_011416091.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000312 - plastid small ribosomal subunit [Evidence IEA]
GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: protein motif:HMM:NF016290.2
GO:0019867 - outer membrane [Evidence IEA]
GO:0043165 - Gram-negative-bacterium-type cell outer membrane assembly [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011416093.1
GO:0004823 - leucine-tRNA ligase activity [Evidence IEA]
GO:0006429 - leucyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011416094.1
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
transcription antitermination factor NusB
COORDINATES: similar to AA sequence:RefSeq:WP_011416095.1
GO:0009349 - riboflavin synthase complex [Evidence IEA]
GO:0000906 - 6,7-dimethyl-8-ribityllumazine synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013707538.1
GO:0008686 - 3,4-dihydroxy-2-butanone-4-phosphate synthase activity [Evidence IEA]; GO:0003935 - GTP cyclohydrolase II activity [Evidence IEA]
bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II
COORDINATES: protein motif:HMM:TIGR00187.1
COORDINATES: similar to AA sequence:RefSeq:WP_011416098.1
GO:0140110 - transcription regulator activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF025793.2
cytidine/deoxycytidylate deaminase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011416100.1
COORDINATES: similar to AA sequence:RefSeq:WP_000716794.1
GO:0004751 - ribose-5-phosphate isomerase activity [Evidence IEA]
GO:0009052 - pentose-phosphate shunt, non-oxidative branch [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013705552.1
GO:0004315 - 3-oxoacyl-[acyl-carrier-protein] synthase activity [Evidence IEA]
GO:0006633 - fatty acid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011416103.1
GO:0000036 - acyl carrier activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011416104.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
COORDINATES: protein motif:HMM:NF014657.2
COORDINATES: similar to AA sequence:RefSeq:WP_011416106.1
GO:0009332 - glutamate-tRNA ligase complex [Evidence IEA]
GO:0004818 - glutamate-tRNA ligase activity [Evidence IEA]
GO:0006424 - glutamyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF012436.2
COORDINATES: protein motif:HMM:NF012894.2
COORDINATES: protein motif:HMM:TIGR00508.1
GO:0004015 - adenosylmethionine-8-amino-7-oxononanoate transaminase activity [Evidence IEA]
GO:0009102 - biotin biosynthetic process [Evidence IEA]
adenosylmethionine--8-amino-7-oxononanoate transaminase
COORDINATES: protein motif:HMM:NF019589.2
COORDINATES: protein motif:HMM:NF012759.2
COORDINATES: protein motif:HMM:NF013077.2
COORDINATES: protein motif:HMM:NF012337.2
beta-ketoacyl-[acyl-carrier-protein] synthase family protein
COORDINATES: protein motif:HMM:NF012382.2
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]
aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
COORDINATES: protein motif:HMM:NF024891.2
GO:0004141 - dethiobiotin synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00254.1
sensor domain-containing diguanylate cyclase
COORDINATES: protein motif:HMM:NF039183.1
COORDINATES: similar to AA sequence:RefSeq:WP_014808065.1
COORDINATES: similar to AA sequence:RefSeq:WP_014808064.1
COORDINATES: similar to AA sequence:RefSeq:WP_014812024.1
COORDINATES: protein motif:HMM:NF017970.2
COORDINATES: similar to AA sequence:RefSeq:WP_014810270.1
secondary thiamine-phosphate synthase enzyme YjbQ
COORDINATES: similar to AA sequence:RefSeq:WP_000259031.1
sulfonamide-resistant dihydropteroate synthase Sul1
COORDINATES: similar to AA sequence:RefSeq:WP_000679427.1
quaternary ammonium compound efflux SMR transporter QacE delta 1
COORDINATES: protein motif:HMM:NF013078.2
zinc dependent phospholipase C family protein
COORDINATES: protein motif:HMM:NF023128.2
COORDINATES: protein motif:HMM:TIGR01389.1
GO:0003678 - DNA helicase activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: protein motif:HMM:NF025885.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0008134 - transcription factor binding [Evidence IEA]
sigma 54-interacting transcriptional regulator
COORDINATES: protein motif:HMM:NF012656.2
GO:0016627 - oxidoreductase activity, acting on the CH-CH group of donors [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013707085.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
carbamoyl-phosphate synthase large subunit
COORDINATES: protein motif:HMM:NF012593.2
dicarboxylate/amino acid:cation symporter
COORDINATES: protein motif:HMM:TIGR01352.1
COORDINATES: protein motif:HMM:NF013648.2
COORDINATES: protein motif:HMM:NF012801.2
COORDINATES: nucleotide motif:Rfam:14.4:RF00174
cobalamin riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF013219.2
COORDINATES: protein motif:HMM:NF012437.2
COORDINATES: protein motif:HMM:NF015910.2
sodium ion-translocating decarboxylase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_011416150.1
COORDINATES: similar to AA sequence:RefSeq:WP_011417069.1
GO:0006814 - sodium ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011418041.1
GO:0004803 - transposase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003230776.1
COORDINATES: protein motif:HMM:TIGR01292.1
GO:0004791 - thioredoxin-disulfide reductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00544.1
GO:0008961 - phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity [Evidence IEA]
GO:0009249 - protein lipoylation [Evidence IEA]
prolipoprotein diacylglyceryl transferase
COORDINATES: protein motif:HMM:NF019604.2
COORDINATES: protein motif:HMM:NF010612.0
COORDINATES: protein motif:HMM:NF024587.2
COORDINATES: protein motif:HMM:NF012797.2
COORDINATES: protein motif:HMM:NF015077.2
COORDINATES: similar to AA sequence:RefSeq:WP_014810938.1
GO:0004802 - transketolase activity [Evidence IEA]
GO:0006098 - pentose-phosphate shunt [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014810936.1
COORDINATES: protein motif:HMM:TIGR00196.1
bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase
COORDINATES: protein motif:HMM:NF012568.2
COORDINATES: similar to AA sequence:RefSeq:WP_003044951.1
GO:0033743 - peptide-methionine (R)-S-oxide reductase activity [Evidence IEA]
GO:0030091 - protein repair [Evidence IEA]; GO:0006979 - response to oxidative stress [Evidence IEA]
peptide-methionine (R)-S-oxide reductase MsrB
COORDINATES: protein motif:HMM:NF013766.2
GO:0033744 - L-methionine:thioredoxin-disulfide S-oxidoreductase activity [Evidence IEA]; GO:0008113 - peptide-methionine (S)-S-oxide reductase activity [Evidence IEA]
peptide-methionine (S)-S-oxide reductase MsrA
COORDINATES: similar to AA sequence:RefSeq:WP_013706469.1
ATP-binding cassette domain-containing protein
COORDINATES: protein motif:HMM:TIGR04430.1
GO:0015914 - phospholipid transport [Evidence IEA]
outer membrane lipid asymmetry maintenance protein MlaD
COORDINATES: protein motif:HMM:NF017319.2
ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF016236.2
COORDINATES: protein motif:HMM:NF012335.2
COORDINATES: similar to AA sequence:RefSeq:WP_011416183.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]; GO:0008172 - S-methyltransferase activity [Evidence IEA]; GO:0016782 - transferase activity, transferring sulphur-containing groups [Evidence IEA]
GO:0018339 - peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid [Evidence IEA]
30S ribosomal protein S12 methylthiotransferase RimO
COORDINATES: protein motif:HMM:NF013727.2
COORDINATES: protein motif:HMM:TIGR00530.1
lysophospholipid acyltransferase family protein
COORDINATES: protein motif:HMM:NF025743.2
COORDINATES: protein motif:HMM:TIGR00255.1
COORDINATES: similar to AA sequence:RefSeq:WP_011416189.1
GO:0004385 - guanylate kinase activity [Evidence IEA]
GO:0015949 - nucleobase-containing small molecule interconversion [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014810382.1
GO:0000345 - cytosolic DNA-directed RNA polymerase complex [Evidence IEA]
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]
GO:0006351 - DNA-templated transcription [Evidence IEA]
DNA-directed RNA polymerase subunit omega
COORDINATES: similar to AA sequence:RefSeq:WP_011416191.1
GO:0004590 - orotidine-5'-phosphate decarboxylase activity [Evidence IEA]
GO:0006207 - 'de novo' pyrimidine nucleobase biosynthetic process [Evidence IEA]; GO:0044205 - 'de novo' UMP biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00186.1
GO:0008173 - RNA methyltransferase activity [Evidence IEA]
GO:0009451 - RNA modification [Evidence IEA]
23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB
COORDINATES: similar to AA sequence:RefSeq:WP_014810921.1
type II secretion system F family protein
COORDINATES: protein motif:HMM:NF018391.2
COORDINATES: similar to AA sequence:RefSeq:WP_013706066.1
GO:0004817 - cysteine-tRNA ligase activity [Evidence IEA]
GO:0006423 - cysteinyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR04336.1
COORDINATES: protein motif:HMM:TIGR00296.1
COORDINATES: similar to AA sequence:RefSeq:WP_001265708.1
COORDINATES: protein motif:HMM:TIGR00964.1
GO:0005887 - integral component of plasma membrane [Evidence IEA]
GO:0015450 - protein-transporting ATPase activity [Evidence IEA]
GO:0043952 - protein transport by the Sec complex [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014812939.1
GO:0006353 - DNA-templated transcription termination [Evidence IEA]
transcription termination/antitermination protein NusG
COORDINATES: similar to AA sequence:RefSeq:WP_013028894.1
COORDINATES: similar to AA sequence:RefSeq:WP_011416203.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
COORDINATES: protein motif:HMM:NF000955.1
GO:0015934 - large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002356427.1
COORDINATES: similar to AA sequence:RefSeq:WP_011416206.1
DNA-directed RNA polymerase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_011416207.1
DNA-directed RNA polymerase subunit beta'
COORDINATES: similar to AA sequence:RefSeq:WP_020878811.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013054923.1
COORDINATES: similar to AA sequence:RefSeq:WP_011416212.1
GO:0003746 - translation elongation factor activity [Evidence IEA]
GO:0006414 - translational elongation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014812950.1
GO:0003723 - RNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011416214.1
COORDINATES: similar to AA sequence:RefSeq:WP_011416215.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011416216.1
COORDINATES: similar to AA sequence:RefSeq:WP_011416217.1
COORDINATES: similar to AA sequence:RefSeq:WP_001829710.1
COORDINATES: similar to AA sequence:RefSeq:WP_011416219.1
COORDINATES: similar to AA sequence:RefSeq:WP_011416220.1
COORDINATES: similar to AA sequence:RefSeq:WP_011416222.1
COORDINATES: similar to AA sequence:RefSeq:WP_011416223.1
COORDINATES: protein motif:HMM:TIGR03635.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011567679.1
COORDINATES: similar to AA sequence:RefSeq:WP_011416226.1
COORDINATES: similar to AA sequence:RefSeq:WP_011416227.1
COORDINATES: similar to AA sequence:RefSeq:WP_002946164.1
COORDINATES: similar to AA sequence:RefSeq:WP_000178880.1
COORDINATES: similar to AA sequence:RefSeq:WP_011416230.1
GO:0019843 - rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011416231.1
COORDINATES: similar to AA sequence:RefSeq:WP_011416232.1
COORDINATES: similar to AA sequence:RefSeq:WP_011416233.1
COORDINATES: protein motif:HMM:TIGR01071.1
COORDINATES: similar to AA sequence:RefSeq:WP_014812971.1
COORDINATES: similar to AA sequence:RefSeq:WP_014811623.1
GO:0036211 - protein modification process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003130554.1
GO:0003743 - translation initiation factor activity [Evidence IEA]
GO:0006413 - translational initiation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005487032.1
COORDINATES: similar to AA sequence:RefSeq:WP_000090796.1
COORDINATES: similar to AA sequence:RefSeq:WP_001029758.1
COORDINATES: similar to AA sequence:RefSeq:WP_011416240.1
GO:0015935 - small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011416241.1
DNA-directed RNA polymerase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_011416242.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0005762 - mitochondrial large ribosomal subunit [Evidence IEA]
COORDINATES: protein motif:HMM:NF015126.2
COORDINATES: protein motif:HMM:NF024118.2
3',5'-cyclic-nucleotide phosphodiesterase
COORDINATES: protein motif:HMM:TIGR01499.1
bifunctional folylpolyglutamate synthase/dihydrofolate synthase
COORDINATES: protein motif:HMM:NF040057.1
GO:0061024 - membrane organization [Evidence IEA]; GO:0010033 - response to organic substance [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008919631.1
COORDINATES: similar to AA sequence:RefSeq:WP_002942223.1
COORDINATES: similar to AA sequence:RefSeq:WP_013705148.1
GO:0003942 - N-acetyl-gamma-glutamyl-phosphate reductase activity [Evidence IEA]
GO:0006592 - ornithine biosynthetic process [Evidence IEA]
N-acetyl-gamma-glutamyl-phosphate reductase
COORDINATES: similar to AA sequence:RefSeq:WP_014808956.1
COORDINATES: similar to AA sequence:RefSeq:WP_011416253.1
GO:0004813 - alanine-tRNA ligase activity [Evidence IEA]
GO:0006419 - alanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF014668.2
COORDINATES: similar to AA sequence:RefSeq:WP_011416255.1
GO:0008094 - ATP-dependent activity, acting on DNA [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0009432 - SOS response [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02258.1
GO:0008664 - 2'-5'-RNA ligase activity [Evidence IEA]
GO:0008033 - tRNA processing [Evidence IEA]
COORDINATES: protein motif:HMM:NF001813.0
COORDINATES: protein motif:HMM:NF016489.2
COORDINATES: protein motif:HMM:NF025589.2
COORDINATES: protein motif:HMM:NF008887.0
anaerobic nitric oxide reductase flavorubredoxin
COORDINATES: protein motif:HMM:NF015166.2
COORDINATES: similar to AA sequence:RefSeq:WP_002898704.1
GO:0010181 - FMN binding [Evidence IEA]; GO:0003955 - NAD(P)H dehydrogenase (quinone) activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF008102.0
COORDINATES: similar to AA sequence:RefSeq:WP_002443355.1
COORDINATES: similar to AA sequence:RefSeq:WP_014809284.1
COORDINATES: similar to AA sequence:RefSeq:WP_014810577.1
phosphoribosylformylglycinamidine synthase subunit PurQ
COORDINATES: protein motif:HMM:NF014442.2
GO:0003824 - catalytic activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
GO:0006304 - DNA modification [Evidence IEA]
Eco57I restriction-modification methylase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014808455.1
COORDINATES: similar to AA sequence:RefSeq:WP_011418873.1
COORDINATES: protein motif:HMM:TIGR02822.1
zinc-dependent alcohol dehydrogenase family protein
COORDINATES: protein motif:HMM:NF027449.2
hydroxyacylglutathione hydrolase family protein
COORDINATES: protein motif:HMM:NF025038.2
COORDINATES: similar to AA sequence:RefSeq:WP_013706082.1
COORDINATES: protein motif:HMM:NF020134.2
COORDINATES: protein motif:HMM:NF020130.2
COORDINATES: protein motif:HMM:NF012703.2
COORDINATES: protein motif:HMM:TIGR01733.1
amino acid adenylation domain-containing protein
COORDINATES: protein motif:HMM:NF012744.2
COORDINATES: similar to AA sequence:RefSeq:WP_003244270.1
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF012754.2
COORDINATES: similar to AA sequence:RefSeq:WP_016290285.1
COORDINATES: protein motif:HMM:NF024635.2
COORDINATES: protein motif:HMM:NF014051.2
COORDINATES: protein motif:HMM:NF016800.2
COORDINATES: protein motif:HMM:NF014453.2
COORDINATES: similar to AA sequence:RefSeq:WP_013706118.1
SDR family NAD(P)-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_013707580.1
GO:0016779 - nucleotidyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013706117.1
DegT/DnrJ/EryC1/StrS family aminotransferase
COORDINATES: protein motif:HMM:NF037144.2
COORDINATES: protein motif:HMM:TIGR01179.1
GO:0003978 - UDP-glucose 4-epimerase activity [Evidence IEA]
GO:0006012 - galactose metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014811600.1
COORDINATES: protein motif:HMM:TIGR03370.1
VPLPA-CTERM sorting domain-containing protein
COORDINATES: protein motif:HMM:NF037100.2
nucleotidyltransferase domain-containing protein
COORDINATES: protein motif:HMM:TIGR03026.1
GO:0051287 - NAD binding [Evidence IEA]; GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]; GO:0003979 - UDP-glucose 6-dehydrogenase activity [Evidence IEA]
GO:0000271 - polysaccharide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_001214397.1
COORDINATES: protein motif:HMM:NF015049.2
COORDINATES: protein motif:HMM:NF024832.2
COORDINATES: protein motif:HMM:NF012745.2
COORDINATES: protein motif:HMM:NF024880.2
COORDINATES: protein motif:HMM:NF025025.2
phenylacetate--CoA ligase family protein
COORDINATES: protein motif:HMM:TIGR00696.1
WecB/TagA/CpsF family glycosyltransferase
COORDINATES: protein motif:HMM:TIGR04152.1
GO:0004197 - cysteine-type endopeptidase activity [Evidence IEA]
GO:0043687 - post-translational protein modification [Evidence IEA]
COORDINATES: protein motif:HMM:NF013146.2
COORDINATES: protein motif:HMM:NF037660.2
COORDINATES: protein motif:HMM:NF014606.2
GO:0015159 - polysaccharide transmembrane transporter activity [Evidence IEA]
GO:0015774 - polysaccharide transport [Evidence IEA]
polysaccharide biosynthesis/export family protein
COORDINATES: protein motif:HMM:NF014732.2
GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]
Wzz/FepE/Etk N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF022077.2
COORDINATES: protein motif:HMM:TIGR01245.1
GO:0004048 - anthranilate phosphoribosyltransferase activity [Evidence IEA]
GO:0000162 - tryptophan biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012444.2
COORDINATES: protein motif:HMM:NF012900.2
COORDINATES: similar to AA sequence:RefSeq:WP_011418032.1
COORDINATES: similar to AA sequence:RefSeq:WP_011417131.1
GO:0008080 - N-acetyltransferase activity [Evidence IEA]
bifunctional acetyl-CoA hydrolase/transferase family protein/GNAT family N-acetyltransferase
COORDINATES: protein motif:HMM:NF033496.0
DUF2080 family transposase-associated protein
COORDINATES: protein motif:HMM:NF014430.2
COORDINATES: protein motif:HMM:NF013323.2
COORDINATES: protein motif:HMM:NF024642.2
COORDINATES: similar to AA sequence:RefSeq:WP_011416361.1
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]
COORDINATES: protein motif:HMM:NF013584.2
COORDINATES: similar to AA sequence:RefSeq:WP_011416363.1
GO:0016884 - carbon-nitrogen ligase activity, with glutamine as amido-N-donor [Evidence IEA]
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB
COORDINATES: similar to AA sequence:RefSeq:WP_011417834.1
bifunctional acetate--CoA ligase family protein/GNAT family N-acetyltransferase
COORDINATES: protein motif:HMM:NF024929.2
COORDINATES: protein motif:HMM:NF018963.2
COORDINATES: similar to AA sequence:RefSeq:WP_011418728.1
COORDINATES: similar to AA sequence:RefSeq:WP_011416373.1
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0016661 - oxidoreductase activity, acting on other nitrogenous compounds as donors [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014810343.1
COORDINATES: similar to AA sequence:RefSeq:WP_014810339.1
Crp/Fnr family transcriptional regulator
COORDINATES: protein motif:HMM:NF027594.2
COORDINATES: protein motif:HMM:NF003363.0
COORDINATES: similar to AA sequence:RefSeq:WP_011416051.1
COORDINATES: similar to AA sequence:RefSeq:WP_014809768.1
COORDINATES: similar to AA sequence:RefSeq:WP_011418932.1
COORDINATES: similar to AA sequence:RefSeq:WP_011417298.1
COORDINATES: similar to AA sequence:RefSeq:WP_011416390.1
COORDINATES: protein motif:HMM:NF012601.2
COORDINATES: protein motif:HMM:NF012383.2
COORDINATES: protein motif:HMM:NF013695.2
GO:0008324 - cation transmembrane transporter activity [Evidence IEA]
GO:0006812 - cation transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF014594.2
acetyl-CoA hydrolase/transferase family protein
COORDINATES: protein motif:HMM:NF014763.2
GO:0016791 - phosphatase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF020650.2
COORDINATES: protein motif:HMM:NF024970.2
COORDINATES: protein motif:HMM:TIGR00377.1
COORDINATES: protein motif:HMM:NF012792.2
COORDINATES: protein motif:HMM:NF013718.2
COORDINATES: protein motif:HMM:NF013391.2
GO:0016301 - kinase activity [Evidence IEA]
GO:0008654 - phospholipid biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF015735.2
COORDINATES: similar to AA sequence:RefSeq:WP_016451564.1
COORDINATES: protein motif:HMM:NF013866.2
COORDINATES: protein motif:HMM:NF024491.2
phospholipase D-like domain-containing protein
COORDINATES: protein motif:HMM:NF013003.2
COORDINATES: similar to AA sequence:RefSeq:WP_011418302.1
COORDINATES: similar to AA sequence:RefSeq:WP_011416422.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00521
SAM riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF027261.2
COORDINATES: protein motif:HMM:NF025073.2
COORDINATES: protein motif:HMM:NF012870.2
GO:0015074 - DNA integration [Evidence IEA]
DDE-type integrase/transposase/recombinase
COORDINATES: protein motif:HMM:NF012234.2
COORDINATES: protein motif:HMM:NF018011.2
COORDINATES: protein motif:HMM:NF025712.2
Lar family restriction alleviation protein
COORDINATES: protein motif:HMM:NF019000.2
host-nuclease inhibitor Gam family protein
COORDINATES: protein motif:HMM:NF022018.2
COORDINATES: protein motif:HMM:NF023181.2
COORDINATES: protein motif:HMM:NF018755.2
COORDINATES: protein motif:HMM:NF013427.2
GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF023411.2
COORDINATES: protein motif:HMM:NF015211.2
COORDINATES: protein motif:HMM:NF017850.2
COORDINATES: protein motif:HMM:NF016148.2
PBECR2 nuclease fold domain-containing protein
COORDINATES: protein motif:HMM:NF016927.2
GO:0044423 - virion component [Evidence IEA]
GO:0005198 - structural molecule activity [Evidence IEA]
GO:0016032 - viral process [Evidence IEA]
COORDINATES: protein motif:HMM:NF021627.2
COORDINATES: similar to AA sequence:RefSeq:WP_013706452.1
Mu-like prophage major head subunit gpT family protein
COORDINATES: protein motif:HMM:NF036841.2
COORDINATES: protein motif:HMM:NF018704.2
COORDINATES: protein motif:HMM:NF020447.2
COORDINATES: protein motif:HMM:NF016845.2
phage tail sheath subtilisin-like domain-containing protein
COORDINATES: protein motif:HMM:NF021614.2
COORDINATES: protein motif:HMM:TIGR01760.1
COORDINATES: protein motif:HMM:NF018818.2
DNA circularization N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF018585.2
COORDINATES: protein motif:HMM:NF019055.2
COORDINATES: protein motif:HMM:NF016736.2
COORDINATES: protein motif:HMM:NF021583.2
COORDINATES: protein motif:HMM:NF025659.2
COORDINATES: protein motif:HMM:NF013884.2
COORDINATES: protein motif:HMM:NF018028.2
COORDINATES: protein motif:HMM:NF008692.0
GO:0008168 - methyltransferase activity [Evidence IEA]
GO:0006364 - rRNA processing [Evidence IEA]
16S rRNA (uracil(1498)-N(3))-methyltransferase
COORDINATES: protein motif:HMM:NF018076.2
GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
50S ribosomal protein L11 methyltransferase
COORDINATES: protein motif:HMM:TIGR01470.1
bifunctional precorrin-2 dehydrogenase/sirohydrochlorin ferrochelatase
COORDINATES: protein motif:HMM:NF013725.2
COORDINATES: protein motif:HMM:TIGR01035.1
GO:0008883 - glutamyl-tRNA reductase activity [Evidence IEA]
GO:0006779 - porphyrin-containing compound biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011416486.1
GO:0004418 - hydroxymethylbilane synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF004790.0
GO:0004851 - uroporphyrin-III C-methyltransferase activity [Evidence IEA]
GO:0019354 - siroheme biosynthetic process [Evidence IEA]
uroporphyrinogen-III C-methyltransferase
COORDINATES: protein motif:HMM:NF016356.2
DUF523 and DUF1722 domain-containing protein
COORDINATES: protein motif:HMM:NF013832.2
COORDINATES: protein motif:HMM:NF039800.1
COORDINATES: similar to AA sequence:RefSeq:WP_013705027.1
GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO:0006785 - heme B biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014808682.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004655 - porphobilinogen synthase activity [Evidence IEA]
GO:0033014 - tetrapyrrole biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013705399.1
COORDINATES: similar to AA sequence:RefSeq:WP_014811377.1
GO:0043565 - sequence-specific DNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF012376.2
GO:0016787 - hydrolase activity [Evidence IEA]
GO:0009166 - nucleotide catabolic process [Evidence IEA]
5'-nucleotidase C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF004397.1
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
GO:0006261 - DNA-templated DNA replication [Evidence IEA]
COORDINATES: protein motif:HMM:NF012970.2
D-alanyl-D-alanine carboxypeptidase family protein
COORDINATES: protein motif:HMM:NF014822.2
GO:0003824 - catalytic activity [Evidence IEA]; GO:0043169 - cation binding [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
alpha amylase C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF009395.0
GO:0003849 - 3-deoxy-7-phosphoheptulonate synthase activity [Evidence IEA]
GO:0009423 - chorismate biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF021551.2
CRISPR system precrRNA processing endoribonuclease RAMP protein Cas6
COORDINATES: protein motif:HMM:NF021162.2
GO:0003674 - molecular_function [Evidence IEA]
GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01894.1
type III-B CRISPR module RAMP protein Cmr1
COORDINATES: protein motif:HMM:TIGR02577.1
type III-B CRISPR-associated protein Cas10/Cmr2
COORDINATES: protein motif:HMM:NF021236.2
COORDINATES: protein motif:HMM:TIGR02580.1
type III-B CRISPR module RAMP protein Cmr4
COORDINATES: protein motif:HMM:NF021237.2
type III-B CRISPR module-associated protein Cmr5
COORDINATES: protein motif:HMM:NF015728.2
type III-B CRISPR module RAMP protein Cmr6
COORDINATES: protein motif:HMM:TIGR02619.1
COORDINATES: protein motif:HMM:NF021207.2
TIGR02710 family CRISPR-associated CARF protein
COORDINATES: protein motif:HMM:TIGR00287.1
GO:0004520 - endodeoxyribonuclease activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01573.1
GO:0004521 - endoribonuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024872.2
COORDINATES: similar to AA sequence:RefSeq:WP_010957626.1
fructose-1,6-bisphosphate aldolase/phosphatase
COORDINATES: protein motif:HMM:NF021127.2
COORDINATES: similar to AA sequence:RefSeq:WP_019389448.1
type II toxin-antitoxin system YafQ family toxin
COORDINATES: protein motif:HMM:TIGR02384.1
type II toxin-antitoxin system RelB/DinJ family antitoxin
COORDINATES: protein motif:HMM:NF012798.2
COORDINATES: protein motif:HMM:NF025010.2
COORDINATES: similar to AA sequence:RefSeq:WP_013706146.1
COORDINATES: protein motif:HMM:TIGR00219.1
GO:0008360 - regulation of cell shape [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03423.1
GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013707381.1
COORDINATES: protein motif:HMM:NF012645.2
COORDINATES: protein motif:HMM:TIGR01144.1
GO:0000276 - mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]; GO:0045264 - plasma membrane proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]; GO:0045263 - proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]
GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism [Evidence IEA]
GO:0015986 - proton motive force-driven ATP synthesis [Evidence IEA]
COORDINATES: protein motif:HMM:NF004402.0
GO:0000275 - mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1) [Evidence IEA]; GO:0045262 - plasma membrane proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]; GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011416543.1
COORDINATES: similar to AA sequence:RefSeq:WP_011416544.1
COORDINATES: similar to AA sequence:RefSeq:WP_011416545.1
COORDINATES: protein motif:HMM:NF009980.0
COORDINATES: similar to AA sequence:RefSeq:WP_011416547.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0070063 - RNA polymerase binding [Evidence IEA]
GO:0032784 - regulation of DNA-templated transcription elongation [Evidence IEA]
COORDINATES: protein motif:HMM:NF020967.2
COORDINATES: protein motif:HMM:NF012514.2
COORDINATES: protein motif:HMM:NF015983.2
GO:0003824 - catalytic activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF016424.2
COORDINATES: protein motif:HMM:NF015944.2
COORDINATES: protein motif:HMM:NF013528.2
COORDINATES: similar to AA sequence:RefSeq:WP_013705057.1
COORDINATES: protein motif:HMM:TIGR00096.1
GO:0008649 - rRNA methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO:0000451 - rRNA 2'-O-methylation [Evidence IEA]
16S rRNA (cytidine(1402)-2'-O)-methyltransferase
COORDINATES: protein motif:HMM:NF017459.2
COORDINATES: protein motif:HMM:NF016648.2
COORDINATES: protein motif:HMM:NF013250.2
GO:0016780 - phosphotransferase activity, for other substituted phosphate groups [Evidence IEA]
CDP-alcohol phosphatidyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013707242.1
GO:0004829 - threonine-tRNA ligase activity [Evidence IEA]
GO:0006435 - threonyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014809015.1
COORDINATES: similar to AA sequence:RefSeq:WP_005950095.1
COORDINATES: similar to AA sequence:RefSeq:WP_011416568.1
COORDINATES: similar to AA sequence:RefSeq:WP_011416569.1
GO:0009328 - phenylalanine-tRNA ligase complex [Evidence IEA]
GO:0004826 - phenylalanine-tRNA ligase activity [Evidence IEA]
GO:0006432 - phenylalanyl-tRNA aminoacylation [Evidence IEA]
phenylalanine--tRNA ligase subunit alpha
COORDINATES: protein motif:HMM:TIGR00472.1
COORDINATES: similar to AA sequence:RefSeq:WP_014811089.1
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: protein motif:HMM:NF024803.2
COORDINATES: similar to AA sequence:RefSeq:WP_014810356.1
COORDINATES: protein motif:HMM:NF015570.2
PTS system mannose/fructose/sorbose family transporter subunit IID
COORDINATES: protein motif:HMM:TIGR01003.1
COORDINATES: protein motif:HMM:TIGR01417.1
GO:0008965 - phosphoenolpyruvate-protein phosphotransferase activity [Evidence IEA]
GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]; GO:0006808 - regulation of nitrogen utilization [Evidence IEA]
phosphoenolpyruvate--protein phosphotransferase
COORDINATES: protein motif:HMM:NF014017.2
COORDINATES: similar to AA sequence:RefSeq:WP_011001079.1
GO:0004634 - phosphopyruvate hydratase activity [Evidence IEA]
GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013707825.1
COORDINATES: protein motif:HMM:TIGR00247.1
GO:0008932 - lytic endotransglycosylase activity [Evidence IEA]
GO:0071555 - cell wall organization [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011416584.1
GO:0051302 - regulation of cell division [Evidence IEA]
division/cell wall cluster transcriptional repressor MraZ
COORDINATES: similar to AA sequence:RefSeq:WP_011416585.1
GO:0016434 - rRNA (cytosine) methyltransferase activity [Evidence IEA]
16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH
COORDINATES: protein motif:HMM:TIGR02209.1
COORDINATES: protein motif:HMM:NF013100.2
GO:0008658 - penicillin binding [Evidence IEA]
penicillin-binding transpeptidase domain-containing protein
COORDINATES: protein motif:HMM:NF001126.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0008360 - regulation of cell shape [Evidence IEA]
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase
COORDINATES: protein motif:HMM:TIGR01143.1
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase
COORDINATES: similar to AA sequence:RefSeq:WP_011416591.1
GO:0008963 - phospho-N-acetylmuramoyl-pentapeptide-transferase activity [Evidence IEA]
phospho-N-acetylmuramoyl-pentapeptide- transferase
COORDINATES: protein motif:HMM:TIGR01087.1
GO:0008764 - UDP-N-acetylmuramoylalanine-D-glutamate ligase activity [Evidence IEA]
UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
COORDINATES: protein motif:HMM:TIGR02614.1
GO:0051301 - cell division [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011416594.1
GO:0050511 - undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity [Evidence IEA]
undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_011416595.1
GO:0008763 - UDP-N-acetylmuramate-L-alanine ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF010480.0
GO:0071949 - FAD binding [Evidence IEA]; GO:0008762 - UDP-N-acetylmuramate dehydrogenase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015739.2
COORDINATES: similar to AA sequence:RefSeq:WP_014812441.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
GO:0043093 - FtsZ-dependent cytokinesis [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00065.1
GO:0003924 - GTPase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013731.2
COORDINATES: protein motif:HMM:NF013867.2
protein-glutamate O-methyltransferase CheR
GO:0006935 - chemotaxis [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011418365.1
COORDINATES: similar to AA sequence:RefSeq:WP_014807950.1
chemotaxis-specific protein-glutamate methyltransferase CheB
COORDINATES: similar to AA sequence:RefSeq:WP_020046387.1
GO:0008853 - exodeoxyribonuclease III activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF016243.2
COORDINATES: protein motif:HMM:NF019310.2
COORDINATES: protein motif:HMM:NF019758.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF012711.2
class I adenylate-forming enzyme family protein
COORDINATES: protein motif:HMM:NF013340.2
YbhB/YbcL family Raf kinase inhibitor-like protein
COORDINATES: protein motif:HMM:NF013713.2
GO:0004014 - adenosylmethionine decarboxylase activity [Evidence IEA]
GO:0008295 - spermidine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF001824.0
GO:0009380 - excinuclease repair complex [Evidence IEA]
GO:0009381 - excinuclease ABC activity [Evidence IEA]
GO:0006289 - nucleotide-excision repair [Evidence IEA]
COORDINATES: protein motif:HMM:NF013346.2
COORDINATES: similar to AA sequence:RefSeq:WP_011416620.1
GO:0004349 - glutamate 5-kinase activity [Evidence IEA]
GO:0006561 - proline biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011416621.1
COORDINATES: similar to AA sequence:RefSeq:WP_011416622.1
COORDINATES: protein motif:HMM:TIGR00061.1
COORDINATES: protein motif:HMM:TIGR03960.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO:0008152 - metabolic process [Evidence IEA]
TIGR03960 family B12-binding radical SAM protein
COORDINATES: protein motif:HMM:TIGR01203.1
GO:0006166 - purine ribonucleoside salvage [Evidence IEA]
COORDINATES: protein motif:HMM:NF023334.2
COORDINATES: protein motif:HMM:NF019507.2
COORDINATES: protein motif:HMM:NF013434.2
COORDINATES: protein motif:HMM:NF023222.2
COORDINATES: protein motif:HMM:TIGR00057.1
GO:0061710 - L-threonylcarbamoyladenylate synthase [Evidence IEA]
GO:0006400 - tRNA modification [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013705289.1
GO:0009320 - phosphoribosylaminoimidazole carboxylase complex [Evidence IEA]
GO:0004638 - phosphoribosylaminoimidazole carboxylase activity [Evidence IEA]
GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
5-(carboxyamino)imidazole ribonucleotide mutase
COORDINATES: protein motif:HMM:NF002049.0
GO:0003824 - catalytic activity [Evidence IEA]; GO:0003937 - IMP cyclohydrolase activity [Evidence IEA]; GO:0004643 - phosphoribosylaminoimidazolecarboxamide formyltransferase activity [Evidence IEA]
GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]; GO:0006164 - purine nucleotide biosynthetic process [Evidence IEA]
bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
COORDINATES: protein motif:HMM:TIGR00877.1
GO:0004637 - phosphoribosylamine-glycine ligase activity [Evidence IEA]
GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]; GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012695.2
NTP transferase domain-containing protein
COORDINATES: protein motif:HMM:TIGR00737.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0017150 - tRNA dihydrouridine synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF017016.2
COORDINATES: nucleotide motif:Rfam:14.4:RF00013
COORDINATES: similar to AA sequence:RefSeq:WP_011416644.1
GO:0006402 - mRNA catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013706839.1
GO:0042578 - phosphoric ester hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011416646.1
GO:0004831 - tyrosine-tRNA ligase activity [Evidence IEA]
GO:0006437 - tyrosyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00177
COORDINATES: nucleotide motif:Rfam:14.4:RF02541
COORDINATES: nucleotide motif:Rfam:14.4:RF00001
COORDINATES: protein motif:HMM:NF019984.2
reverse transcriptase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011416652.1
YebC/PmpR family DNA-binding transcriptional regulator
COORDINATES: protein motif:HMM:NF000711.0
GO:0008821 - crossover junction endodeoxyribonuclease activity [Evidence IEA]
crossover junction endodeoxyribonuclease RuvC
COORDINATES: protein motif:HMM:NF001040.0
GO:0009379 - Holliday junction helicase complex [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0009378 - four-way junction helicase activity [Evidence IEA]
Holliday junction branch migration protein RuvA
COORDINATES: similar to AA sequence:RefSeq:WP_011416655.1
Holliday junction branch migration DNA helicase RuvB
COORDINATES: protein motif:HMM:NF014707.2
COORDINATES: similar to AA sequence:RefSeq:WP_011416657.1
IS5-like element ISSac2 family transposase
COORDINATES: protein motif:HMM:NF014630.2
C4-type zinc ribbon domain-containing protein
COORDINATES: nucleotide motif:Rfam:14.4:RF00010
COORDINATES: similar to AA sequence:RefSeq:WP_013707324.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0008986 - pyruvate, water dikinase activity [Evidence IEA]; GO:0016772 - transferase activity, transferring phosphorus-containing groups [Evidence IEA]
GO:0016310 - phosphorylation [Evidence IEA]; GO:0006090 - pyruvate metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012365.2
COORDINATES: protein motif:HMM:NF014164.2
COORDINATES: protein motif:HMM:NF038085.1
COORDINATES: protein motif:HMM:NF014042.2
UDP-N-acetylglucosamine pyrophosphorylase
COORDINATES: similar to AA sequence:RefSeq:WP_011416666.1
GO:0008966 - phosphoglucosamine mutase activity [Evidence IEA]
GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013356.2
COORDINATES: protein motif:HMM:NF023197.2
COORDINATES: protein motif:HMM:NF006628.0
GO:0004332 - fructose-bisphosphate aldolase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013707816.1
COORDINATES: similar to AA sequence:RefSeq:WP_013705569.1
GO:0004743 - pyruvate kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014715.2
GO:0004340 - glucokinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011416675.1
GO:0004347 - glucose-6-phosphate isomerase activity [Evidence IEA]
GO:0006094 - gluconeogenesis [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013707314.1
COORDINATES: protein motif:HMM:TIGR00915.1
GO:0015562 - efflux transmembrane transporter activity [Evidence IEA]
GO:0055085 - transmembrane transport [Evidence IEA]; GO:0042908 - xenobiotic transport [Evidence IEA]
multidrug efflux RND transporter permease subunit
COORDINATES: protein motif:HMM:TIGR01845.1
GO:0009279 - cell outer membrane [Evidence IEA]
GO:0015288 - porin activity [Evidence IEA]
efflux transporter outer membrane subunit
COORDINATES: protein motif:HMM:NF015925.2
COORDINATES: protein motif:HMM:NF008216.0
COORDINATES: similar to AA sequence:RefSeq:WP_011417406.1
COORDINATES: protein motif:HMM:NF024867.2
COORDINATES: protein motif:HMM:TIGR00619.1
exonuclease SbcCD subunit D C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF025729.2
COORDINATES: protein motif:HMM:NF020317.2
COORDINATES: protein motif:HMM:NF012766.2
COORDINATES: protein motif:HMM:NF016488.2
COORDINATES: similar to AA sequence:RefSeq:WP_014809201.1
GO:0008047 - enzyme activator activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011418430.1
GO:0008792 - arginine decarboxylase activity [Evidence IEA]
GO:0006527 - arginine catabolic process [Evidence IEA]; GO:0006596 - polyamine biosynthetic process [Evidence IEA]
arginine decarboxylase, pyruvoyl-dependent
COORDINATES: protein motif:HMM:NF024314.2
COORDINATES: similar to AA sequence:RefSeq:WP_006477530.1
COORDINATES: protein motif:HMM:NF008629.1
GO:0004519 - endonuclease activity [Evidence IEA]
cleaves DNA at apurinic or apyrimidinic sites; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF004160.0
GO:0003919 - FMN adenylyltransferase activity [Evidence IEA]
bifunctional riboflavin kinase/FAD synthetase
COORDINATES: protein motif:HMM:NF013053.2
COORDINATES: protein motif:HMM:NF012481.2
COORDINATES: similar to AA sequence:RefSeq:WP_011416718.1
GO:0016405 - CoA-ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011416716.1
COORDINATES: protein motif:HMM:NF013775.2
COORDINATES: protein motif:HMM:TIGR02669.1
GO:0005575 - cellular_component [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016446160.1
COORDINATES: protein motif:HMM:NF024487.2
COORDINATES: protein motif:HMM:NF025019.2
COORDINATES: protein motif:HMM:NF014923.2
COORDINATES: similar to AA sequence:RefSeq:WP_014811716.1
COORDINATES: protein motif:HMM:NF015786.2
GO:0003908 - methylated-DNA-[protein]-cysteine S-methyltransferase activity [Evidence IEA]
methylated-DNA--[protein]-cysteine S-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_014811322.1
COORDINATES: similar to AA sequence:RefSeq:WP_011416741.1
GO:0003883 - CTP synthase activity [Evidence IEA]
GO:0006241 - CTP biosynthetic process [Evidence IEA]; GO:0006221 - pyrimidine nucleotide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024912.2
GO:0097367 - carbohydrate derivative binding [Evidence IEA]
GO:1901135 - carbohydrate derivative metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014950.2
COORDINATES: similar to AA sequence:RefSeq:WP_018465116.1
cyclic pyranopterin monophosphate synthase MoaC
COORDINATES: similar to AA sequence:RefSeq:WP_014809036.1
YifB family Mg chelatase-like AAA ATPase
COORDINATES: protein motif:HMM:NF013247.2
COORDINATES: protein motif:HMM:NF015510.2
outer membrane lipoprotein carrier protein LolA
COORDINATES: protein motif:HMM:NF023855.2
glycogen debranching enzyme N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF019924.2
COORDINATES: protein motif:HMM:NF015052.2
COORDINATES: protein motif:HMM:TIGR02094.1
COORDINATES: similar to AA sequence:RefSeq:WP_013707329.1
COORDINATES: protein motif:HMM:NF024874.2
COORDINATES: protein motif:HMM:NF033542.1
COORDINATES: similar to AA sequence:RefSeq:WP_014810202.1
type IV pilus twitching motility protein PilT
COORDINATES: protein motif:HMM:TIGR01420.1
GO:0043107 - type IV pilus-dependent motility [Evidence IEA]
COORDINATES: protein motif:HMM:NF013048.2
GO:0008417 - fucosyltransferase activity [Evidence IEA]
GO:0006486 - protein glycosylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF018017.2
mitochondrial fission ELM1 family protein
COORDINATES: protein motif:HMM:NF015251.2
COORDINATES: protein motif:HMM:NF024824.2
COORDINATES: protein motif:HMM:NF015899.2
COORDINATES: protein motif:HMM:NF013707.2
GO:0016903 - oxidoreductase activity, acting on the aldehyde or oxo group of donors [Evidence IEA]
COORDINATES: protein motif:HMM:NF013974.2
COORDINATES: protein motif:HMM:TIGR02177.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013707369.1
COORDINATES: protein motif:HMM:TIGR00238.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0016853 - isomerase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011416782.1
COORDINATES: protein motif:HMM:NF006828.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0004824 - lysine-tRNA ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006430 - lysyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014807995.1
GO:0015078 - proton transmembrane transporter activity [Evidence IEA]
GO:1902600 - proton transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020480666.1
GO:0015291 - secondary active transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02800.1
GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
Tol-Pal system beta propeller repeat protein TolB
COORDINATES: protein motif:HMM:NF024915.2
COORDINATES: protein motif:HMM:NF025490.2
COORDINATES: protein motif:HMM:NF025910.2
COORDINATES: protein motif:HMM:NF016623.2
divergent polysaccharide deacetylase family protein
COORDINATES: protein motif:HMM:TIGR00225.1
COORDINATES: protein motif:HMM:NF014003.2
COORDINATES: protein motif:HMM:NF012415.2
COORDINATES: protein motif:HMM:NF014680.2
COORDINATES: protein motif:HMM:NF013844.2
COORDINATES: protein motif:HMM:NF012791.2
COORDINATES: protein motif:HMM:TIGR01494.1
COORDINATES: similar to AA sequence:RefSeq:WP_014810304.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF024545.2
COORDINATES: protein motif:HMM:TIGR01524.1
GO:0015444 - P-type magnesium transporter activity [Evidence IEA]
GO:0015693 - magnesium ion transport [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00580.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003690 - double-stranded DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013707345.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0008987 - quinolinate synthetase A activity [Evidence IEA]
GO:0009435 - NAD biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02653.1
protease Lon-related BREX system protein BrxL
COORDINATES: protein motif:HMM:NF033450.1
COORDINATES: similar to AA sequence:RefSeq:WP_013706690.1
putative DNA binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014594305.1
COORDINATES: protein motif:HMM:TIGR03299.1
COORDINATES: protein motif:HMM:NF020509.2
COORDINATES: protein motif:HMM:NF025056.2
toll/interleukin-1 receptor domain-containing protein
COORDINATES: protein motif:HMM:NF033441.0
COORDINATES: protein motif:HMM:NF020329.2
COORDINATES: similar to AA sequence:RefSeq:WP_011417569.1
WYL domain-containing transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_017953470.1
ADP-ribosylglycohydrolase family protein
COORDINATES: protein motif:HMM:NF039803.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF025120.2
COORDINATES: protein motif:HMM:NF019421.2
type II toxin-antitoxin system HipA family toxin
COORDINATES: protein motif:HMM:NF024106.2
COORDINATES: protein motif:HMM:NF014081.2
GO:0009975 - cyclase activity [Evidence IEA]
GO:0009966 - regulation of signal transduction [Evidence IEA]
COORDINATES: protein motif:HMM:NF028512.2
COORDINATES: protein motif:HMM:NF013412.2
pyridoxamine 5'-phosphate oxidase family protein
COORDINATES: protein motif:HMM:NF025692.2
COORDINATES: protein motif:HMM:NF039586.1
COORDINATES: similar to AA sequence:RefSeq:WP_013705711.1
COORDINATES: protein motif:HMM:NF023514.2
COORDINATES: protein motif:HMM:NF010887.0
COORDINATES: protein motif:HMM:NF010568.0
GO:0004639 - phosphoribosylaminoimidazolesuccinocarboxamide synthase activity [Evidence IEA]
GO:0006164 - purine nucleotide biosynthetic process [Evidence IEA]
phosphoribosylaminoimidazolesuccinocarboxamide synthase
COORDINATES: similar to AA sequence:RefSeq:WP_014810761.1
COORDINATES: protein motif:HMM:NF011494.0
GO:0008168 - methyltransferase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]; GO:0001510 - RNA methylation [Evidence IEA]
16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
COORDINATES: similar to AA sequence:RefSeq:WP_011416865.1
GO:0004479 - methionyl-tRNA formyltransferase activity [Evidence IEA]
GO:0006431 - methionyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004628536.1
GO:0032955 - regulation of division septum assembly [Evidence IEA]
cell division topological specificity factor MinE
GO:0016887 - ATP hydrolysis activity [Evidence IEA]
GO:0000918 - division septum site selection [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01222.1
GO:0004857 - enzyme inhibitor activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF009709.0
COORDINATES: protein motif:HMM:NF024091.2
COORDINATES: protein motif:HMM:NF014025.2
COORDINATES: protein motif:HMM:NF027890.2
COORDINATES: protein motif:HMM:NF012385.2
COORDINATES: protein motif:HMM:TIGR01396.1
GO:0009429 - bacterial-type flagellum basal body, proximal rod [Evidence IEA]
GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016290463.1
GO:0009425 - bacterial-type flagellum basal body [Evidence IEA]
COORDINATES: protein motif:HMM:NF014143.2
flagellar hook-basal body complex protein FliE
COORDINATES: protein motif:HMM:TIGR00206.1
GO:0009431 - bacterial-type flagellum basal body, MS ring [Evidence IEA]
flagellar basal-body MS-ring/collar protein FliF
COORDINATES: protein motif:HMM:TIGR00207.1
GO:0009433 - bacterial-type flagellum basal body, C ring [Evidence IEA]
GO:0006935 - chemotaxis [Evidence IEA]; GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
COORDINATES: protein motif:HMM:NF014196.2
COORDINATES: protein motif:HMM:TIGR01026.1
GO:0009288 - bacterial-type flagellum [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02473.1
GO:0009288 - bacterial-type flagellum [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]
GO:0003774 - cytoskeletal motor activity [Evidence IEA]
GO:0071973 - bacterial-type flagellum-dependent cell motility [Evidence IEA]; GO:0006935 - chemotaxis [Evidence IEA]
COORDINATES: protein motif:HMM:NF012422.2
COORDINATES: protein motif:HMM:NF014445.2
GO:0016755 - aminoacyltransferase activity [Evidence IEA]
GO:0044038 - cell wall macromolecule biosynthetic process [Evidence IEA]
peptidoglycan bridge formation glycyltransferase FemA/FemB family protein
COORDINATES: protein motif:HMM:NF016432.2
sigma factor-like helix-turn-helix DNA-binding protein
COORDINATES: protein motif:HMM:NF014627.2
COORDINATES: protein motif:HMM:NF017076.2
adenylate/guanylate cyclase domain-containing protein
COORDINATES: protein motif:HMM:TIGR00492.1
GO:0008784 - alanine racemase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF002528.0
COORDINATES: similar to AA sequence:RefSeq:WP_013705471.1
COORDINATES: similar to AA sequence:RefSeq:WP_013706470.1
COORDINATES: protein motif:HMM:NF014523.2
COORDINATES: protein motif:HMM:NF025684.2
COORDINATES: similar to AA sequence:RefSeq:WP_014810777.1
COORDINATES: protein motif:HMM:TIGR00591.1
GO:0003904 - deoxyribodipyrimidine photo-lyase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011417974.1
COORDINATES: protein motif:HMM:NF024206.2
ankyrin repeat domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_076612008.1
programmed frameshift; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_001572760.1
COORDINATES: similar to AA sequence:RefSeq:WP_011733826.1
COORDINATES: similar to AA sequence:RefSeq:WP_011416931.1
COORDINATES: similar to AA sequence:RefSeq:WP_011417668.1
COORDINATES: similar to AA sequence:RefSeq:WP_011418182.1
COORDINATES: protein motif:HMM:NF018500.2
COORDINATES: similar to AA sequence:RefSeq:WP_076611351.1
programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF013015.2
COORDINATES: protein motif:HMM:NF014626.2
COORDINATES: protein motif:HMM:NF037428.2
COORDINATES: similar to AA sequence:RefSeq:WP_011418993.1
COORDINATES: protein motif:HMM:NF013543.2
COORDINATES: protein motif:HMM:NF016270.2
COORDINATES: protein motif:HMM:NF024799.2
COORDINATES: protein motif:HMM:NF015239.2
COORDINATES: protein motif:HMM:NF024251.2
COORDINATES: protein motif:HMM:NF013691.2
COORDINATES: similar to AA sequence:RefSeq:WP_011937497.1
COORDINATES: similar to AA sequence:RefSeq:WP_011937498.1
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF012655.2
TetR/AcrR family transcriptional regulator
COORDINATES: protein motif:HMM:NF019612.2
COORDINATES: protein motif:HMM:NF011291.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0004819 - glutamine-tRNA ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006425 - glutaminyl-tRNA aminoacylation [Evidence IEA]
glutamine--tRNA ligase/YqeY domain fusion protein
COORDINATES: similar to AA sequence:RefSeq:WP_015905308.1
GO:0004756 - selenide, water dikinase activity [Evidence IEA]
GO:0001887 - selenium compound metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF040786.1
selenium metabolism-associated LysR family transcriptional regulator
COORDINATES: protein motif:HMM:TIGR00260.1
GO:0004795 - threonine synthase activity [Evidence IEA]
GO:0009088 - threonine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005830549.1
COORDINATES: protein motif:HMM:NF013756.2
COORDINATES: similar to AA sequence:RefSeq:WP_014810792.1
GO:0016226 - iron-sulfur cluster assembly [Evidence IEA]; GO:0009399 - nitrogen fixation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014810791.1
GO:0031071 - cysteine desulfurase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF009466.0
COORDINATES: similar to AA sequence:RefSeq:WP_014809495.1
COORDINATES: protein motif:HMM:NF003243.0
COORDINATES: protein motif:HMM:NF015325.2
COORDINATES: similar to AA sequence:RefSeq:WP_014812864.1
COORDINATES: protein motif:HMM:TIGR03955.1
[FeFe] hydrogenase H-cluster radical SAM maturase HydG
COORDINATES: protein motif:HMM:TIGR03956.1
[FeFe] hydrogenase H-cluster radical SAM maturase HydE
COORDINATES: similar to AA sequence:RefSeq:WP_011343663.1
COORDINATES: similar to AA sequence:RefSeq:WP_011417005.1
COORDINATES: similar to AA sequence:RefSeq:WP_013706964.1
COORDINATES: protein motif:HMM:NF012955.2
COORDINATES: protein motif:HMM:NF013670.2
GO:0008745 - N-acetylmuramoyl-L-alanine amidase activity [Evidence IEA]
GO:0009253 - peptidoglycan catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013706657.1
COORDINATES: similar to AA sequence:RefSeq:WP_014812859.1
[FeFe] hydrogenase H-cluster maturation GTPase HydF
COORDINATES: similar to AA sequence:RefSeq:WP_246892337.1
NADH-dependent [FeFe] hydrogenase, group A6
COORDINATES: similar to AA sequence:RefSeq:WP_011416990.1
COORDINATES: protein motif:HMM:NF016365.2
COORDINATES: similar to AA sequence:RefSeq:WP_011416698.1
COORDINATES: protein motif:HMM:NF028237.2
COORDINATES: protein motif:HMM:NF013234.2
phosphomannose isomerase type II C-terminal cupin domain
COORDINATES: similar to AA sequence:RefSeq:WP_011418900.1
COORDINATES: similar to AA sequence:RefSeq:WP_002451995.1
NAD-dependent epimerase/dehydratase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011417385.1
COORDINATES: protein motif:HMM:NF012428.2
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO:0008483 - transaminase activity [Evidence IEA]
aminotransferase class III-fold pyridoxal phosphate-dependent enzyme
COORDINATES: protein motif:HMM:NF013345.2
YggS family pyridoxal phosphate-dependent enzyme
COORDINATES: protein motif:HMM:TIGR00172.1
COORDINATES: protein motif:HMM:NF022137.2
class I SAM-dependent rRNA methyltransferase
PAS and helix-turn-helix domain-containing protein
GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00261.1
COORDINATES: protein motif:HMM:NF017743.2
class I SAM-dependent RNA methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_011418097.1
COORDINATES: similar to AA sequence:RefSeq:WP_011418217.1
COORDINATES: protein motif:HMM:NF013046.2
COORDINATES: protein motif:HMM:NF003661.0
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
COORDINATES: protein motif:HMM:NF024483.2
COORDINATES: protein motif:HMM:NF002353.0
GO:0032977 - membrane insertase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011417049.1
membrane protein insertion efficiency factor YidD
COORDINATES: protein motif:HMM:TIGR00188.1
GO:0004526 - ribonuclease P activity [Evidence IEA]
GO:0006396 - RNA processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000831329.1
COORDINATES: protein motif:HMM:NF014385.2
COORDINATES: protein motif:HMM:TIGR01517.1
GO:0005388 - P-type calcium transporter activity [Evidence IEA]
GO:0006816 - calcium ion transport [Evidence IEA]
calcium-translocating P-type ATPase, PMCA-type
COORDINATES: protein motif:HMM:NF016777.2
COORDINATES: protein motif:HMM:NF014066.2
COORDINATES: similar to AA sequence:RefSeq:WP_011418285.1
COORDINATES: protein motif:HMM:NF013428.2
COORDINATES: protein motif:HMM:NF014414.2
COORDINATES: protein motif:HMM:NF013705.2
COORDINATES: protein motif:HMM:NF012417.2
COORDINATES: protein motif:HMM:NF021619.2
COORDINATES: protein motif:HMM:NF013698.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO:0006313 - transposition, DNA-mediated [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011416151.1
COORDINATES: protein motif:HMM:NF020354.2
COORDINATES: protein motif:HMM:NF024139.2
COORDINATES: similar to AA sequence:RefSeq:WP_013705190.1
GO:0004019 - adenylosuccinate synthase activity [Evidence IEA]; GO:0005525 - GTP binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013706247.1
GO:0004617 - phosphoglycerate dehydrogenase activity [Evidence IEA]
GO:0006564 - L-serine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF002841.0
GO:0004648 - O-phospho-L-serine:2-oxoglutarate aminotransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014808006.1
COORDINATES: similar to AA sequence:RefSeq:WP_003229442.1
COORDINATES: protein motif:HMM:TIGR00518.1
GO:0000286 - alanine dehydrogenase activity [Evidence IEA]
GO:0006522 - alanine metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012245.2
GO:0007165 - signal transduction [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013707800.1
COORDINATES: similar to AA sequence:RefSeq:WP_011417097.1
COORDINATES: protein motif:HMM:NF025070.2
COORDINATES: protein motif:HMM:NF015908.2
COORDINATES: similar to AA sequence:RefSeq:WP_011417102.1
chemotaxis response regulator protein-glutamate methylesterase
COORDINATES: similar to AA sequence:RefSeq:WP_012510960.1
COORDINATES: protein motif:HMM:NF006584.0
COORDINATES: protein motif:HMM:NF018894.2
COORDINATES: protein motif:HMM:NF013143.2
metal ABC transporter ATP-binding protein
COORDINATES: protein motif:HMM:NF013465.2
GO:0046872 - metal ion binding [Evidence IEA]
zinc ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF013629.2
COORDINATES: protein motif:HMM:NF001399.0
GO:0009009 - site-specific recombinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF003543.0
GO:0008676 - 3-deoxy-8-phosphooctulonate synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013707032.1
COORDINATES: protein motif:HMM:TIGR04409.1
GO:0005886 - plasma membrane [Evidence IEA]
GO:0015221 - lipopolysaccharide transmembrane transporter activity [Evidence IEA]
GO:0015920 - lipopolysaccharide transport [Evidence IEA]
LPS export ABC transporter periplasmic protein LptC
COORDINATES: protein motif:HMM:NF015901.2
COORDINATES: similar to AA sequence:RefSeq:WP_014813212.1
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]; GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]; GO:0015221 - lipopolysaccharide transmembrane transporter activity [Evidence IEA]
LPS export ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_013707036.1
GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]
GO:0022626 - cytosolic ribosome [Evidence IEA]; GO:0005840 - ribosome [Evidence IEA]
GO:0045182 - translation regulator activity [Evidence IEA]
GO:0009386 - translational attenuation [Evidence IEA]
ribosome-associated translation inhibitor RaiA
COORDINATES: similar to AA sequence:RefSeq:WP_013707038.1
COORDINATES: protein motif:HMM:NF019118.2
serine kinase of the HPr protein, regulates carbohydrate metabolism
COORDINATES: protein motif:HMM:NF015620.2
COORDINATES: protein motif:HMM:NF013700.2
COORDINATES: similar to AA sequence:RefSeq:WP_016290306.1
GO:0006950 - response to stress [Evidence IEA]; GO:0006412 - translation [Evidence IEA]
COORDINATES: protein motif:HMM:NF014877.2
COORDINATES: similar to AA sequence:RefSeq:WP_011417132.1
COORDINATES: protein motif:HMM:NF024811.2
COORDINATES: protein motif:HMM:NF024907.2
COORDINATES: similar to AA sequence:RefSeq:WP_013707078.1
GO:0004018 - N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013706545.1
GO:0008734 - L-aspartate oxidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011417140.1
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD
COORDINATES: protein motif:HMM:NF021363.2
COORDINATES: protein motif:HMM:TIGR00755.1
GO:0000179 - rRNA (adenine-N6,N6-)-dimethyltransferase activity [Evidence IEA]
16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA
COORDINATES: similar to AA sequence:RefSeq:WP_014809314.1
GO:0004592 - pantoate-beta-alanine ligase activity [Evidence IEA]
GO:0015940 - pantothenate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011417144.1
GO:0004068 - aspartate 1-decarboxylase activity [Evidence IEA]
GO:0006523 - alanine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01034.1
GO:0004478 - methionine adenosyltransferase activity [Evidence IEA]
GO:0006556 - S-adenosylmethionine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF017071.2
GO:0004013 - adenosylhomocysteinase activity [Evidence IEA]
GO:0006730 - one-carbon metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR04408.1
LPS export ABC transporter permease LptG
COORDINATES: protein motif:HMM:TIGR04407.1
LPS export ABC transporter permease LptF
COORDINATES: protein motif:HMM:NF004981.0
histidinol phosphate phosphatase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008811800.1
GO:0008998 - ribonucleoside-triphosphate reductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02495.1
GO:0009265 - 2'-deoxyribonucleotide biosynthetic process [Evidence IEA]; GO:0051353 - positive regulation of oxidoreductase activity [Evidence IEA]
anaerobic ribonucleoside-triphosphate reductase activating protein
GO:0004222 - metalloendopeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00017.1
GO:0004127 - cytidylate kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00717.1
COORDINATES: protein motif:HMM:TIGR00706.1
GO:0006465 - signal peptide processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016176834.1
COORDINATES: similar to AA sequence:RefSeq:WP_014812404.1
COORDINATES: similar to AA sequence:RefSeq:WP_013707266.1
COORDINATES: similar to AA sequence:RefSeq:WP_016357051.1
COORDINATES: protein motif:HMM:NF008747.0
COORDINATES: protein motif:HMM:NF004066.1
GO:0032508 - DNA duplex unwinding [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014810378.1
GO:0019899 - enzyme binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00090.1
GO:0043022 - ribosome binding [Evidence IEA]
GO:0017148 - negative regulation of translation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014813194.1
COORDINATES: similar to AA sequence:RefSeq:WP_013707787.1
COORDINATES: protein motif:HMM:TIGR01132.1
GO:0004614 - phosphoglucomutase activity [Evidence IEA]
phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent)
COORDINATES: protein motif:HMM:TIGR00010.1
COORDINATES: protein motif:HMM:TIGR01378.1
GO:0004788 - thiamine diphosphokinase activity [Evidence IEA]
GO:0006772 - thiamine metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00097.1
GO:0008902 - hydroxymethylpyrimidine kinase activity [Evidence IEA]; GO:0008972 - phosphomethylpyrimidine kinase activity [Evidence IEA]
GO:0009228 - thiamine biosynthetic process [Evidence IEA]
bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase
COORDINATES: similar to AA sequence:RefSeq:WP_011417175.1
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF013871.2
COORDINATES: similar to AA sequence:RefSeq:WP_011417177.1
GO:0004400 - histidinol-phosphate transaminase activity [Evidence IEA]
GO:0000105 - histidine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF026080.2
COORDINATES: protein motif:HMM:NF013776.2
COORDINATES: protein motif:HMM:NF024571.2
COORDINATES: protein motif:HMM:NF016876.2
type II toxin-antitoxin system RelE/ParE family toxin
COORDINATES: protein motif:HMM:NF013540.2
COORDINATES: protein motif:HMM:NF012321.2
COORDINATES: protein motif:HMM:NF019428.2
TadE/TadG family type IV pilus assembly protein
COORDINATES: protein motif:HMM:NF024816.2
COORDINATES: protein motif:HMM:NF024791.2
LytR C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF012694.2
COORDINATES: similar to AA sequence:RefSeq:WP_013707022.1
COORDINATES: protein motif:HMM:NF025001.2
COORDINATES: protein motif:HMM:NF021493.2
COORDINATES: protein motif:HMM:NF012485.2
type II and III secretion system protein family protein
COORDINATES: protein motif:HMM:TIGR03177.1
COORDINATES: protein motif:HMM:NF013632.2
COORDINATES: similar to AA sequence:RefSeq:WP_006022733.1
COORDINATES: protein motif:HMM:NF026041.2
COORDINATES: protein motif:HMM:NF013073.2
COORDINATES: protein motif:HMM:NF013614.2
SufD family Fe-S cluster assembly protein
COORDINATES: similar to AA sequence:RefSeq:WP_014808367.1
GO:0008460 - dTDP-glucose 4,6-dehydratase activity [Evidence IEA]
GO:0019305 - dTDP-rhamnose biosynthetic process [Evidence IEA]; GO:0009243 - O antigen biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF016281.2
COORDINATES: protein motif:HMM:NF039482.1
GO:0003951 - NAD+ kinase activity [Evidence IEA]
GO:0006741 - NADP biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00634.1
COORDINATES: protein motif:HMM:NF005840.0
GO:0006526 - arginine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF015523.2
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013707272.1
COORDINATES: similar to AA sequence:RefSeq:WP_013705945.1
GO:0004830 - tryptophan-tRNA ligase activity [Evidence IEA]
GO:0006436 - tryptophanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00093.1
COORDINATES: protein motif:HMM:NF024985.2
COORDINATES: protein motif:HMM:NF006981.0
COORDINATES: protein motif:HMM:TIGR01967.1
GO:0004386 - helicase activity [Evidence IEA]
GO:0006139 - nucleobase-containing compound metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF005574.0
GO:0004152 - dihydroorotate dehydrogenase activity [Evidence IEA]
GO:0006221 - pyrimidine nucleotide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF016895.2
dihydroorotate dehydrogenase electron transfer subunit
COORDINATES: protein motif:HMM:TIGR01575.1
GO:0008999 - ribosomal protein S5-alanine alpha-N-acetyltransferase activity [Evidence IEA]
GO:0036211 - protein modification process [Evidence IEA]; GO:0042254 - ribosome biogenesis [Evidence IEA]
ribosomal protein S18-alanine N-acetyltransferase
COORDINATES: protein motif:HMM:NF015566.2
GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]
COORDINATES: protein motif:HMM:NF015769.2
COORDINATES: protein motif:HMM:NF015567.2
COORDINATES: protein motif:HMM:NF014207.2
flagellar hook-length control protein FliK
COORDINATES: protein motif:HMM:NF025230.2
COORDINATES: protein motif:HMM:TIGR03506.1
COORDINATES: protein motif:HMM:NF015693.2
flagellar basal body-associated FliL family protein
COORDINATES: protein motif:HMM:TIGR01397.1
COORDINATES: protein motif:HMM:TIGR02480.1
COORDINATES: protein motif:HMM:NF016250.2
GO:0044781 - bacterial-type flagellum organization [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018050304.1
The bacterial flagellar biogenesis protein FliP forms a type III secretion system (T3SS)-type pore required for flagellar assembly; Derived by automated computational analysis using gene prediction method: Protein Homology.
flagellar type III secretion system pore protein FliP
COORDINATES: protein motif:HMM:TIGR01402.1
COORDINATES: protein motif:HMM:TIGR01400.1
GO:0044780 - bacterial-type flagellum assembly [Evidence IEA]; GO:0006605 - protein targeting [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00328.1
COORDINATES: protein motif:HMM:TIGR01398.1
COORDINATES: protein motif:HMM:TIGR03499.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]
GO:0044781 - bacterial-type flagellum organization [Evidence IEA]; GO:0006614 - SRP-dependent cotranslational protein targeting to membrane [Evidence IEA]
COORDINATES: protein motif:HMM:NF012369.2
COORDINATES: protein motif:HMM:TIGR02937.1
FliA/WhiG family RNA polymerase sigma factor
COORDINATES: protein motif:HMM:NF013479.2
GO:0009306 - protein secretion [Evidence IEA]
EscU/YscU/HrcU family type III secretion system export apparatus switch protein
COORDINATES: protein motif:HMM:TIGR02488.1
GO:0009426 - bacterial-type flagellum basal body, distal rod [Evidence IEA]
GO:0071973 - bacterial-type flagellum-dependent cell motility [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03170.1
GO:0009428 - bacterial-type flagellum basal body, distal rod, P ring [Evidence IEA]
flagellar basal body P-ring formation chaperone FlgA
COORDINATES: protein motif:HMM:NF014195.2
flagellar basal body L-ring protein FlgH
COORDINATES: protein motif:HMM:NF014206.2
flagellar basal body P-ring protein FlgI
COORDINATES: protein motif:HMM:NF021638.2
COORDINATES: protein motif:HMM:TIGR03824.1
GO:0045892 - negative regulation of DNA-templated transcription [Evidence IEA]
flagellar biosynthesis anti-sigma factor FlgM
COORDINATES: protein motif:HMM:NF016985.2
COORDINATES: protein motif:HMM:TIGR02492.1
GO:0009424 - bacterial-type flagellum hook [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02550.1
COORDINATES: protein motif:HMM:TIGR00202.1
GO:0006402 - mRNA catabolic process [Evidence IEA]; GO:0006109 - regulation of carbohydrate metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF009793.2
GO:0044780 - bacterial-type flagellum assembly [Evidence IEA]; GO:0006417 - regulation of translation [Evidence IEA]
COORDINATES: protein motif:HMM:NF015602.2
COORDINATES: protein motif:HMM:TIGR00208.1
COORDINATES: protein motif:HMM:NF018852.2
GO:0007155 - cell adhesion [Evidence IEA]
COORDINATES: protein motif:HMM:NF012874.2
TPR domain-containing glycosyltransferase
COORDINATES: protein motif:HMM:NF025217.2
methyltransferase domain-containing protein
COORDINATES: protein motif:HMM:NF013618.2
lytic transglycosylase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011417279.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]
methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO
COORDINATES: similar to AA sequence:RefSeq:WP_013707568.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003917 - DNA topoisomerase type I (single strand cut, ATP-independent) activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00732.1
GO:0009294 - DNA-mediated transformation [Evidence IEA]
COORDINATES: protein motif:HMM:NF012966.2
GO:0004055 - argininosuccinate synthase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR04085.1
COORDINATES: protein motif:HMM:NF012522.2
COORDINATES: protein motif:HMM:NF013753.2
internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF038090.1
COORDINATES: protein motif:HMM:TIGR00559.1
COORDINATES: similar to AA sequence:RefSeq:WP_014809458.1
COORDINATES: similar to AA sequence:RefSeq:WP_014809766.1
COORDINATES: protein motif:HMM:NF023395.2
COORDINATES: protein motif:HMM:NF024786.2
COORDINATES: similar to AA sequence:RefSeq:WP_011416578.1
COORDINATES: protein motif:HMM:TIGR03793.1
NHLP leader peptide family RiPP precursor
COORDINATES: protein motif:HMM:TIGR03604.1
TOMM precursor leader peptide-binding protein
COORDINATES: protein motif:HMM:NF015418.2
COORDINATES: protein motif:HMM:TIGR02142.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO:0015412 - ABC-type molybdate transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO:0015689 - molybdate ion transport [Evidence IEA]
molybdenum ABC transporter ATP-binding protein
COORDINATES: protein motif:HMM:NF006939.0
GO:0015098 - molybdate ion transmembrane transporter activity [Evidence IEA]
molybdate ABC transporter permease subunit
GO:0031362 - anchored component of external side of plasma membrane [Evidence IEA]; GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO:0015412 - ABC-type molybdate transporter activity [Evidence IEA]; GO:0030973 - molybdate ion binding [Evidence IEA]
molybdate ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:TIGR00638.1
COORDINATES: protein motif:HMM:NF011068.0
GO:0032324 - molybdopterin cofactor biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012398.2
COORDINATES: similar to AA sequence:RefSeq:WP_011418091.1
COORDINATES: similar to AA sequence:RefSeq:WP_011416420.1
COORDINATES: similar to AA sequence:RefSeq:WP_011417322.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]; GO:0016782 - transferase activity, transferring sulphur-containing groups [Evidence IEA]
tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
COORDINATES: similar to AA sequence:RefSeq:WP_013705846.1
COORDINATES: similar to AA sequence:RefSeq:WP_013707403.1
GO:0004298 - threonine-type endopeptidase activity [Evidence IEA]
GO:0051603 - proteolysis involved in protein catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014810357.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]
ATP-dependent protease ATPase subunit HslU
COORDINATES: similar to AA sequence:RefSeq:WP_011417327.1
GO:0003991 - acetylglutamate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014810882.1
GO:0006525 - arginine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011417329.1
GO:0004585 - ornithine carbamoyltransferase activity [Evidence IEA]
GO:0042450 - arginine biosynthetic process via ornithine [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011417330.1
COORDINATES: similar to AA sequence:RefSeq:WP_011417331.1
GO:0004056 - argininosuccinate lyase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014810877.1
GO:0008836 - diaminopimelate decarboxylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013707419.1
GO:0008840 - 4-hydroxy-tetrahydrodipicolinate synthase activity [Evidence IEA]
4-hydroxy-tetrahydrodipicolinate synthase
COORDINATES: similar to AA sequence:RefSeq:WP_011417335.1
GO:0008839 - 4-hydroxy-tetrahydrodipicolinate reductase [Evidence IEA]
4-hydroxy-tetrahydrodipicolinate reductase
COORDINATES: protein motif:HMM:TIGR01498.1
GO:0003848 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity [Evidence IEA]
GO:0009396 - folic acid-containing compound biosynthetic process [Evidence IEA]
2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase
COORDINATES: protein motif:HMM:NF013116.2
GO:0016832 - aldehyde-lyase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00560.1
GO:0008444 - CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity [Evidence IEA]
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
COORDINATES: protein motif:HMM:NF025887.2
nuclear transport factor 2 family protein
COORDINATES: protein motif:HMM:NF002074.0
GO:0070006 - metalloaminopeptidase activity [Evidence IEA]
GO:0019538 - protein metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003232965.1
COORDINATES: similar to AA sequence:RefSeq:WP_014811372.1
COORDINATES: similar to AA sequence:RefSeq:WP_011417350.1
COORDINATES: similar to AA sequence:RefSeq:WP_011417352.1
COORDINATES: protein motif:HMM:NF033103.1
GO:0008800 - beta-lactamase activity [Evidence IEA]
GO:0030655 - beta-lactam antibiotic catabolic process [Evidence IEA]; GO:0046677 - response to antibiotic [Evidence IEA]
COORDINATES: protein motif:HMM:NF015639.2
COORDINATES: protein motif:HMM:TIGR01450.1
GO:0009338 - exodeoxyribonuclease V complex [Evidence IEA]
GO:0008854 - exodeoxyribonuclease V activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00609.1
COORDINATES: protein motif:HMM:TIGR01447.1
COORDINATES: protein motif:HMM:NF015948.2
COORDINATES: protein motif:HMM:NF021733.2
COORDINATES: protein motif:HMM:TIGR01414.1
autotransporter outer membrane beta-barrel domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011418116.1
COORDINATES: protein motif:HMM:NF015338.2
endonuclease/exonuclease/phosphatase family protein
COORDINATES: protein motif:HMM:TIGR00765.1
YihY/virulence factor BrkB family protein
COORDINATES: protein motif:HMM:NF021445.2
phosphatidylglycerol lysyltransferase domain-containing protein
COORDINATES: protein motif:HMM:NF001380.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0019205 - nucleobase-containing compound kinase activity [Evidence IEA]; GO:0016776 - phosphotransferase activity, phosphate group as acceptor [Evidence IEA]
COORDINATES: protein motif:HMM:NF024754.2
COORDINATES: similar to AA sequence:RefSeq:WP_013705562.1
COORDINATES: similar to AA sequence:RefSeq:WP_011417376.1
COORDINATES: similar to AA sequence:RefSeq:WP_013705560.1
GO:0004821 - histidine-tRNA ligase activity [Evidence IEA]
GO:0006427 - histidyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00361.1
GO:0009290 - DNA import into cell involved in transformation [Evidence IEA]
DNA internalization-related competence protein ComEC/Rec2
COORDINATES: similar to AA sequence:RefSeq:WP_014808247.1
COORDINATES: protein motif:HMM:TIGR00644.1
GO:0008297 - single-stranded DNA exodeoxyribonuclease activity [Evidence IEA]
single-stranded-DNA-specific exonuclease RecJ
COORDINATES: protein motif:HMM:NF013226.2
COORDINATES: protein motif:HMM:NF014653.2
COORDINATES: similar to AA sequence:RefSeq:WP_014813074.1
COORDINATES: protein motif:HMM:TIGR00974.1
COORDINATES: similar to AA sequence:RefSeq:WP_011417392.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]
phosphate ABC transporter ATP-binding protein PstB
COORDINATES: protein motif:HMM:TIGR02135.1
GO:0051049 - regulation of transport [Evidence IEA]
phosphate signaling complex protein PhoU
COORDINATES: similar to AA sequence:RefSeq:WP_003966899.1
COORDINATES: similar to AA sequence:RefSeq:WP_011417396.1
COORDINATES: similar to AA sequence:RefSeq:WP_013707817.1
GO:0004822 - isoleucine-tRNA ligase activity [Evidence IEA]
GO:0006428 - isoleucyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011417398.1
GO:0004190 - aspartic-type endopeptidase activity [Evidence IEA]
GO:0009306 - protein secretion [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013707422.1
COORDINATES: similar to AA sequence:RefSeq:WP_013707444.1
GO:0000107 - imidazoleglycerol-phosphate synthase activity [Evidence IEA]
imidazole glycerol phosphate synthase subunit HisF
COORDINATES: protein motif:HMM:NF024829.2
HlyD family efflux transporter periplasmic adaptor subunit
COORDINATES: protein motif:HMM:NF024116.2
COORDINATES: similar to AA sequence:RefSeq:WP_014808416.1
COORDINATES: similar to AA sequence:RefSeq:WP_011416683.1
COORDINATES: similar to AA sequence:RefSeq:WP_011418175.1
prepilin-type N-terminal cleavage/methylation domain-containing protein
COORDINATES: protein motif:HMM:NF025341.2
COORDINATES: protein motif:HMM:NF024946.2
COORDINATES: protein motif:HMM:NF024873.2
ribonuclease H-like domain-containing protein
COORDINATES: protein motif:HMM:NF013625.2
peptidoglycan-binding domain-containing protein
COORDINATES: protein motif:HMM:NF016262.2
COORDINATES: protein motif:HMM:NF005760.0
COORDINATES: similar to AA sequence:RefSeq:WP_014810499.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011417419.1
GO:0033739 - preQ1 synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011417982.1
COORDINATES: similar to AA sequence:RefSeq:WP_011417421.1
GO:0052381 - tRNA dimethylallyltransferase activity [Evidence IEA]
tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA
COORDINATES: similar to AA sequence:RefSeq:WP_014811819.1
GO:0003864 - 3-methyl-2-oxobutanoate hydroxymethyltransferase activity [Evidence IEA]
3-methyl-2-oxobutanoate hydroxymethyltransferase
COORDINATES: protein motif:HMM:NF022188.2
COORDINATES: protein motif:HMM:TIGR02432.1
GO:0016879 - ligase activity, forming carbon-nitrogen bonds [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014808001.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IEA]
GO:0051301 - cell division [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01496.1
GO:0004156 - dihydropteroate synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00516.1
GO:0008897 - holo-[acyl-carrier-protein] synthase activity [Evidence IEA]
GO:0008610 - lipid biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00150.1
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE
COORDINATES: similar to AA sequence:RefSeq:WP_014810800.1
GO:0004072 - aspartate kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024245.2
helix-hairpin-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012606521.1
COORDINATES: protein motif:HMM:TIGR00115.1
GO:0005854 - nascent polypeptide-associated complex [Evidence IEA]
GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA]
GO:0051083 - 'de novo' cotranslational protein folding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011417436.1
GO:0004176 - ATP-dependent peptidase activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
ATP-dependent Clp endopeptidase proteolytic subunit ClpP
COORDINATES: similar to AA sequence:RefSeq:WP_013705419.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
ATP-dependent Clp protease ATP-binding subunit ClpX
COORDINATES: protein motif:HMM:NF008053.0
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004176 - ATP-dependent peptidase activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00546.1
GO:0016410 - N-acyltransferase activity [Evidence IEA]
GO:0042158 - lipoprotein biosynthetic process [Evidence IEA]; GO:0006497 - protein lipidation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_139198277.1
GO:0003747 - translation release factor activity [Evidence IEA]
GO:0006415 - translational termination [Evidence IEA]
LysM peptidoglycan-binding domain-containing protein
COORDINATES: protein motif:HMM:TIGR00043.2
GO:0046872 - metal ion binding [Evidence IEA]; GO:0004540 - ribonuclease activity [Evidence IEA]
GO:0042254 - ribosome biogenesis [Evidence IEA]
COORDINATES: protein motif:HMM:NF019317.2
COORDINATES: similar to AA sequence:RefSeq:WP_013707228.1
COORDINATES: protein motif:HMM:NF010589.0
COORDINATES: protein motif:HMM:NF017044.2
COORDINATES: similar to AA sequence:RefSeq:WP_013707249.1
GO:0004632 - phosphopantothenate--cysteine ligase activity [Evidence IEA]; GO:0004633 - phosphopantothenoylcysteine decarboxylase activity [Evidence IEA]
GO:0015937 - coenzyme A biosynthetic process [Evidence IEA]; GO:0015939 - pantothenate metabolic process [Evidence IEA]
bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC
COORDINATES: protein motif:HMM:TIGR00758.1
COORDINATES: protein motif:HMM:NF014062.2
COORDINATES: similar to AA sequence:RefSeq:WP_013707252.1
COORDINATES: protein motif:HMM:NF039187.1
COORDINATES: protein motif:HMM:TIGR01489.1
COORDINATES: protein motif:HMM:NF040598.1
Lpp/OprI family alanine-zipper lipoprotein
COORDINATES: protein motif:HMM:TIGR00539.1
GO:0051989 - coproporphyrinogen dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011417461.1
COORDINATES: protein motif:HMM:NF011102.0
COORDINATES: similar to AA sequence:RefSeq:WP_014810852.1
pyridoxal phosphate-dependent aminotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_011417465.1
COORDINATES: similar to AA sequence:RefSeq:WP_011417466.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003911 - DNA ligase (NAD+) activity [Evidence IEA]
GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00040.1
COORDINATES: protein motif:HMM:NF018058.2
COORDINATES: protein motif:HMM:NF014037.2
COORDINATES: similar to AA sequence:RefSeq:WP_014811368.1
COORDINATES: similar to AA sequence:RefSeq:WP_014811352.1
COORDINATES: protein motif:HMM:NF014805.2
COORDINATES: protein motif:HMM:NF014489.2
COORDINATES: similar to AA sequence:RefSeq:WP_014808420.1
COORDINATES: similar to AA sequence:RefSeq:WP_011417480.1
GO:0006886 - intracellular protein transport [Evidence IEA]; GO:0017038 - protein import [Evidence IEA]; GO:0006605 - protein targeting [Evidence IEA]
COORDINATES: protein motif:HMM:NF003802.0
GO:0004358 - glutamate N-acetyltransferase activity [Evidence IEA]
bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ
COORDINATES: protein motif:HMM:NF013672.2
polysaccharide deacetylase family protein
COORDINATES: protein motif:HMM:NF004396.0
COORDINATES: similar to AA sequence:RefSeq:WP_011417486.1
COORDINATES: similar to AA sequence:RefSeq:WP_011417487.1
COORDINATES: similar to AA sequence:RefSeq:WP_011417488.1
GO:0033862 - UMP kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011417489.1
GO:0008135 - translation factor activity, RNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF011405.0
GO:0016765 - transferase activity, transferring alkyl or aryl (other than methyl) groups [Evidence IEA]
COORDINATES: protein motif:HMM:NF013327.2
COORDINATES: similar to AA sequence:RefSeq:WP_013707822.1
GO:0030604 - 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0070402 - NADPH binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
GO:0008299 - isoprenoid biosynthetic process [Evidence IEA]
1-deoxy-D-xylulose-5-phosphate reductoisomerase
COORDINATES: protein motif:HMM:NF014244.2
COORDINATES: protein motif:HMM:TIGR03725.1
GO:0003725 - double-stranded RNA binding [Evidence IEA]
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB
COORDINATES: similar to AA sequence:RefSeq:WP_011417495.1
GO:0004609 - phosphatidylserine decarboxylase activity [Evidence IEA]
phosphatidylserine decarboxylase family protein
COORDINATES: protein motif:HMM:TIGR00473.1
GO:0003882 - CDP-diacylglycerol-serine O-phosphatidyltransferase activity [Evidence IEA]
CDP-diacylglycerol--serine O-phosphatidyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_013707831.1
GO:0004073 - aspartate-semialdehyde dehydrogenase activity [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]; GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IEA]
GO:0008652 - cellular amino acid biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00095.1
GO:0052913 - 16S rRNA (guanine(966)-N(2))-methyltransferase activity [Evidence IEA]
GO:0031167 - rRNA methylation [Evidence IEA]
16S rRNA (guanine(966)-N(2))-methyltransferase RsmD
COORDINATES: similar to AA sequence:RefSeq:WP_011417499.1
GO:0004595 - pantetheine-phosphate adenylyltransferase activity [Evidence IEA]
GO:0015937 - coenzyme A biosynthetic process [Evidence IEA]
pantetheine-phosphate adenylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_004398489.1
COORDINATES: protein motif:HMM:NF024927.2
COORDINATES: similar to AA sequence:RefSeq:WP_014808368.1
GO:0046429 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity [Evidence IEA]
GO:0044237 - cellular metabolic process [Evidence IEA]
flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase
COORDINATES: similar to AA sequence:RefSeq:WP_000814312.1
GO:0002161 - aminoacyl-tRNA editing activity [Evidence IEA]; GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004827 - proline-tRNA ligase activity [Evidence IEA]
GO:0006433 - prolyl-tRNA aminoacylation [Evidence IEA]; GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00691.1
bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_011417506.1
GO:0004549 - tRNA-specific ribonuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF011397.0
GO:0047429 - nucleoside triphosphate diphosphatase activity [Evidence IEA]
GO:0009143 - nucleoside triphosphate catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011417510.1
GO:0004045 - aminoacyl-tRNA hydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF018624.2
COORDINATES: similar to AA sequence:RefSeq:WP_013705652.1
GO:0003938 - IMP dehydrogenase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF005298.0
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF003323.0
COORDINATES: protein motif:HMM:NF012451.2
COORDINATES: protein motif:HMM:NF021492.2
COORDINATES: protein motif:HMM:TIGR00051.1
COORDINATES: protein motif:HMM:TIGR00306.2
cofactor-independent phosphoglycerate mutase
COORDINATES: similar to AA sequence:RefSeq:WP_013706968.1
COORDINATES: similar to AA sequence:RefSeq:WP_011417521.1
GO:0004641 - phosphoribosylformylglycinamidine cyclo-ligase activity [Evidence IEA]
phosphoribosylformylglycinamidine cyclo-ligase
COORDINATES: protein motif:HMM:TIGR00639.1
GO:0004644 - phosphoribosylglycinamide formyltransferase activity [Evidence IEA]
phosphoribosylglycinamide formyltransferase
COORDINATES: protein motif:HMM:NF002872.1
GO:0006002 - fructose 6-phosphate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011417525.1
COORDINATES: protein motif:HMM:NF018701.2
COORDINATES: protein motif:HMM:NF023223.2
COORDINATES: protein motif:HMM:NF024947.2
SbcC/MukB-like Walker B domain-containing protein
COORDINATES: protein motif:HMM:NF025205.2
COORDINATES: similar to AA sequence:RefSeq:WP_011341549.1
COORDINATES: protein motif:HMM:NF014044.2
COORDINATES: protein motif:HMM:NF024685.2
COORDINATES: protein motif:HMM:NF016724.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013704.2
COORDINATES: protein motif:HMM:NF025693.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0140658 - ATP-dependent chromatin remodeler activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011367784.1
COORDINATES: protein motif:HMM:NF037161.2
COORDINATES: protein motif:HMM:NF020933.2
DNA double-strand break repair nuclease NurA
COORDINATES: protein motif:HMM:NF025596.2
COORDINATES: protein motif:HMM:NF020436.2
COORDINATES: similar to AA sequence:RefSeq:WP_011416823.1
COORDINATES: protein motif:HMM:NF024498.2
COORDINATES: protein motif:HMM:NF018836.2
type IV conjugative transfer system protein TraL
COORDINATES: protein motif:HMM:NF017152.2
type IV conjugative transfer system protein TraE
COORDINATES: protein motif:HMM:NF018311.2
type-F conjugative transfer system secretin TraK
COORDINATES: protein motif:HMM:NF015688.2
COORDINATES: protein motif:HMM:TIGR02747.1
type IV conjugative transfer system lipoprotein TraV
COORDINATES: protein motif:HMM:NF040179.1
COORDINATES: protein motif:HMM:NF018666.2
COORDINATES: protein motif:HMM:NF023893.2
COORDINATES: protein motif:HMM:NF018536.2
COORDINATES: protein motif:HMM:NF021209.2
type-F conjugative transfer system pilin assembly protein TrbC
COORDINATES: protein motif:HMM:NF021981.2
COORDINATES: protein motif:HMM:NF025105.2
COORDINATES: protein motif:HMM:NF017892.2
COORDINATES: protein motif:HMM:NF019530.2
conjugal transfer protein TraG N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF024734.2
type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein
COORDINATES: protein motif:HMM:NF020419.2
nucleotidyl transferase AbiEii/AbiGii toxin family protein
COORDINATES: protein motif:HMM:NF024949.2
COORDINATES: protein motif:HMM:NF014581.2
TraM recognition domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013705065.1
COORDINATES: protein motif:HMM:NF023645.2
COORDINATES: protein motif:HMM:NF013828.2
COORDINATES: protein motif:HMM:NF033546.1
COORDINATES: protein motif:HMM:NF024724.2
COORDINATES: similar to AA sequence:RefSeq:WP_014811212.1
COORDINATES: similar to AA sequence:RefSeq:WP_014811095.1
COORDINATES: similar to AA sequence:RefSeq:WP_011416860.1
COORDINATES: similar to AA sequence:RefSeq:WP_011415965.1
COORDINATES: similar to AA sequence:RefSeq:WP_011415964.1
COORDINATES: similar to AA sequence:RefSeq:WP_011417622.1
COORDINATES: protein motif:HMM:NF039677.1
COORDINATES: protein motif:HMM:NF012789.2
COORDINATES: protein motif:HMM:NF024117.2
COORDINATES: similar to AA sequence:RefSeq:WP_014810120.1
COORDINATES: similar to AA sequence:RefSeq:WP_014813306.1
integrase arm-type DNA-binding domain-containing protein
COORDINATES: nucleotide motif:Rfam:14.4:RF00023
COORDINATES: similar to AA sequence:RefSeq:WP_011417629.1
COORDINATES: protein motif:HMM:NF013348.2
COORDINATES: protein motif:HMM:TIGR00475.1
GO:0001514 - selenocysteine incorporation [Evidence IEA]; GO:0006414 - translational elongation [Evidence IEA]
selenocysteine-specific translation elongation factor
COORDINATES: protein motif:HMM:NF037527.2
COORDINATES: similar to AA sequence:RefSeq:WP_018113690.1
GO:0043714 - (R)-citramalate synthase activity [Evidence IEA]
GO:0009097 - isoleucine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013705040.1
COORDINATES: protein motif:HMM:TIGR00757.1
GO:0004540 - ribonuclease activity [Evidence IEA]
GO:0006401 - RNA catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013707094.1
GO:0004735 - pyrroline-5-carboxylate reductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014808220.1
COORDINATES: protein motif:HMM:NF014633.2
COORDINATES: protein motif:HMM:TIGR01695.1
GO:0034204 - lipid translocation [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
murein biosynthesis integral membrane protein MurJ
COORDINATES: similar to AA sequence:RefSeq:WP_013707612.1
GO:0004828 - serine-tRNA ligase activity [Evidence IEA]
GO:0006434 - seryl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF015060.2
COORDINATES: protein motif:HMM:NF024698.2
GO:0008236 - serine-type peptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004265443.1
trypsin-like peptidase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013706877.1
COORDINATES: protein motif:HMM:TIGR00106.1
COORDINATES: similar to AA sequence:RefSeq:WP_014809327.1
COORDINATES: protein motif:HMM:NF002677.0
GO:0003684 - damaged DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011417665.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004329 - formate-tetrahydrofolate ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF025116.2
COORDINATES: protein motif:HMM:NF017536.2
COORDINATES: similar to AA sequence:RefSeq:WP_011416932.1
COORDINATES: protein motif:HMM:TIGR00482.1
COORDINATES: similar to AA sequence:RefSeq:WP_011417671.1
GO:0004350 - glutamate-5-semialdehyde dehydrogenase activity [Evidence IEA]; GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02074.1
COORDINATES: protein motif:HMM:NF015298.2
septal ring lytic transglycosylase RlpA family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014813155.1
COORDINATES: similar to AA sequence:RefSeq:WP_014813137.1
COORDINATES: protein motif:HMM:TIGR01730.1
COORDINATES: protein motif:HMM:NF002699.0
COORDINATES: protein motif:HMM:TIGR00237.1
GO:0009318 - exodeoxyribonuclease VII complex [Evidence IEA]
GO:0008855 - exodeoxyribonuclease VII activity [Evidence IEA]
GO:0006308 - DNA catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011417685.1
COORDINATES: similar to AA sequence:RefSeq:WP_013705682.1
COORDINATES: similar to AA sequence:RefSeq:WP_011417687.1
GO:0008661 - 1-deoxy-D-xylulose-5-phosphate synthase activity [Evidence IEA]
GO:0009240 - isopentenyl diphosphate biosynthetic process [Evidence IEA]; GO:0008615 - pyridoxine biosynthetic process [Evidence IEA]; GO:0009228 - thiamine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013706122.1
COORDINATES: protein motif:HMM:TIGR00216.1
GO:0051745 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity [Evidence IEA]
GO:0009240 - isopentenyl diphosphate biosynthetic process [Evidence IEA]; GO:0046677 - response to antibiotic [Evidence IEA]; GO:0015968 - stringent response [Evidence IEA]
4-hydroxy-3-methylbut-2-enyl diphosphate reductase
COORDINATES: similar to AA sequence:RefSeq:WP_013821630.1
COORDINATES: similar to AA sequence:RefSeq:WP_010266056.1
COORDINATES: protein motif:HMM:TIGR00041.1
GO:0004798 - thymidylate kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00678.1
COORDINATES: protein motif:HMM:NF016361.2
regulatory iron-sulfur-containing complex subunit RicT
COORDINATES: similar to AA sequence:RefSeq:WP_013706487.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004825 - methionine-tRNA ligase activity [Evidence IEA]; GO:0000049 - tRNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF013296.2
GO:0016832 - aldehyde-lyase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00486.1
GO:0051540 - metal cluster binding [Evidence IEA]
Nif3-like dinuclear metal center hexameric protein
COORDINATES: protein motif:HMM:NF012536.2
COORDINATES: protein motif:HMM:TIGR03718.1
COORDINATES: protein motif:HMM:NF020965.2
COORDINATES: protein motif:HMM:NF017197.2
COORDINATES: protein motif:HMM:NF019607.2
COORDINATES: protein motif:HMM:NF014234.2
GO:0008977 - prephenate dehydrogenase (NAD+) activity [Evidence IEA]; GO:0004665 - prephenate dehydrogenase (NADP+) activity [Evidence IEA]
GO:0006571 - tyrosine biosynthetic process [Evidence IEA]
prephenate dehydrogenase/arogenate dehydrogenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011417713.1
GO:0004107 - chorismate synthase activity [Evidence IEA]
GO:0009073 - aromatic amino acid family biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013375.2
COORDINATES: similar to AA sequence:RefSeq:WP_013705642.1
GO:0003866 - 3-phosphoshikimate 1-carboxyvinyltransferase activity [Evidence IEA]
3-phosphoshikimate 1-carboxyvinyltransferase
COORDINATES: protein motif:HMM:TIGR00507.1
GO:0004764 - shikimate 3-dehydrogenase (NADP+) activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013640.2
GO:0003855 - 3-dehydroquinate dehydratase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01357.1
GO:0003856 - 3-dehydroquinate synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013705910.1
COORDINATES: similar to AA sequence:RefSeq:WP_011417720.1
GO:0004834 - tryptophan synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018036536.1
GO:0004640 - phosphoribosylanthranilate isomerase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF001377.0
GO:0004425 - indole-3-glycerol-phosphate synthase activity [Evidence IEA]
GO:0006568 - tryptophan metabolic process [Evidence IEA]
indole-3-glycerol phosphate synthase TrpC
COORDINATES: similar to AA sequence:RefSeq:WP_014811875.1
COORDINATES: similar to AA sequence:RefSeq:WP_004042365.1
aminodeoxychorismate/anthranilate synthase component II
COORDINATES: similar to AA sequence:RefSeq:WP_013706781.1
GO:0004049 - anthranilate synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014510.2
COORDINATES: protein motif:HMM:TIGR00383.1
GO:0015087 - cobalt ion transmembrane transporter activity [Evidence IEA]; GO:0015095 - magnesium ion transmembrane transporter activity [Evidence IEA]
GO:0006824 - cobalt ion transport [Evidence IEA]; GO:0015693 - magnesium ion transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF014068.2
COORDINATES: protein motif:HMM:NF013782.2
COORDINATES: protein motif:HMM:NF024176.2
COORDINATES: protein motif:HMM:NF012607.2
COORDINATES: protein motif:HMM:NF014114.2
COORDINATES: similar to AA sequence:RefSeq:WP_013706860.1
COORDINATES: similar to AA sequence:RefSeq:WP_013706861.1
COORDINATES: protein motif:HMM:NF024628.2
COORDINATES: protein motif:HMM:NF015048.2
COORDINATES: nucleotide motif:Rfam:14.4:RF00379
cyclic di-AMP (ydaO/yuaA leader) riboswitch senses the signaling molecule cyclic di-AMP; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF014443.2
GO:0015379 - potassium:chloride symporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014325.2
COORDINATES: similar to AA sequence:RefSeq:WP_011417752.1
COORDINATES: similar to AA sequence:RefSeq:WP_014812168.1
replication-associated recombination protein A
COORDINATES: similar to AA sequence:RefSeq:WP_014809130.1
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO:0004834 - tryptophan synthase activity [Evidence IEA]
GO:0000162 - tryptophan biosynthetic process [Evidence IEA]; GO:0006568 - tryptophan metabolic process [Evidence IEA]
TrpB-like pyridoxal phosphate-dependent enzyme
COORDINATES: protein motif:HMM:NF013383.2
GO:0070403 - NAD+ binding [Evidence IEA]
GO:0006631 - fatty acid metabolic process [Evidence IEA]
3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011417759.1
GO:0008252 - nucleotidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011417760.1
COORDINATES: protein motif:HMM:NF010738.0
GO:0000774 - adenyl-nucleotide exchange factor activity [Evidence IEA]; GO:0051087 - chaperone binding [Evidence IEA]; GO:0042803 - protein homodimerization activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024969.2
COORDINATES: protein motif:HMM:TIGR02487.1
GO:0009265 - 2'-deoxyribonucleotide biosynthetic process [Evidence IEA]
anaerobic ribonucleoside-triphosphate reductase
COORDINATES: protein motif:HMM:NF008775.0
GO:0045900 - negative regulation of translational elongation [Evidence IEA]
energy-dependent translational throttle protein EttA
COORDINATES: protein motif:HMM:NF008675.0
COORDINATES: similar to AA sequence:RefSeq:WP_014812042.1
COORDINATES: protein motif:HMM:NF014386.2
GO:0016682 - oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor [Evidence IEA]
cytochrome d ubiquinol oxidase subunit II
COORDINATES: similar to AA sequence:RefSeq:WP_011417768.1
GO:0008381 - mechanosensitive ion channel activity [Evidence IEA]
GO:0034220 - ion transmembrane transport [Evidence IEA]
large-conductance mechanosensitive channel protein MscL
COORDINATES: similar to AA sequence:RefSeq:WP_014811620.1
COORDINATES: protein motif:HMM:NF024833.2
glycine zipper 2TM domain-containing protein
COORDINATES: protein motif:HMM:NF016836.2
COORDINATES: protein motif:HMM:NF015423.2
trimeric intracellular cation channel family protein
COORDINATES: protein motif:HMM:TIGR00166.1
COORDINATES: similar to AA sequence:RefSeq:WP_011417777.1
COORDINATES: protein motif:HMM:NF021506.2
COORDINATES: similar to AA sequence:RefSeq:WP_011417779.1
COORDINATES: protein motif:HMM:NF004384.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003678 - DNA helicase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014809476.1
COORDINATES: similar to AA sequence:RefSeq:WP_014810770.1
COORDINATES: similar to AA sequence:RefSeq:WP_011418613.1
COORDINATES: protein motif:HMM:NF020473.2
COORDINATES: protein motif:HMM:NF011202.0
GO:0050515 - 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity [Evidence IEA]
GO:0016114 - terpenoid biosynthetic process [Evidence IEA]
4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase
COORDINATES: similar to AA sequence:RefSeq:WP_014811542.1
COORDINATES: protein motif:HMM:NF004139.0
50S ribosomal protein L25/general stress protein Ctc
COORDINATES: protein motif:HMM:NF013368.2
COORDINATES: protein motif:HMM:NF001950.0
COORDINATES: protein motif:HMM:NF001961.0
COORDINATES: similar to AA sequence:RefSeq:WP_014810704.1
sigma-54 factor interaction domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011417795.1
COORDINATES: protein motif:HMM:NF022112.2
COORDINATES: protein motif:HMM:NF012652.2
COORDINATES: similar to AA sequence:RefSeq:WP_011417798.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0030983 - mismatched DNA binding [Evidence IEA]
GO:0006298 - mismatch repair [Evidence IEA]
COORDINATES: protein motif:HMM:NF015953.2
COORDINATES: protein motif:HMM:TIGR02070.1
GO:0016021 - integral component of membrane [Evidence IEA]; GO:0009274 - peptidoglycan-based cell wall [Evidence IEA]
monofunctional biosynthetic peptidoglycan transglycosylase
COORDINATES: similar to AA sequence:RefSeq:WP_014809623.1
COORDINATES: protein motif:HMM:TIGR00127.1
GO:0004450 - isocitrate dehydrogenase (NADP+) activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]
GO:0006102 - isocitrate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011417804.1
GO:0016433 - rRNA (adenine) methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN
COORDINATES: similar to AA sequence:RefSeq:WP_014810684.1
COORDINATES: protein motif:HMM:NF013630.2
COORDINATES: protein motif:HMM:NF014610.2
COORDINATES: protein motif:HMM:NF025499.2
COORDINATES: protein motif:HMM:NF014757.2
3-hydroxyacyl-CoA dehydrogenase family protein
COORDINATES: protein motif:HMM:NF012596.2
COORDINATES: similar to AA sequence:RefSeq:WP_011417817.1
GO:0003933 - GTP cyclohydrolase activity [Evidence IEA]
GO:0035998 - 7,8-dihydroneopterin 3'-triphosphate biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF002730.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0004359 - glutaminase activity [Evidence IEA]; GO:0003952 - NAD+ synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0009435 - NAD biosynthetic process [Evidence IEA]; GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF008448.1
COORDINATES: protein motif:HMM:NF024143.2
COORDINATES: similar to AA sequence:RefSeq:WP_011417823.1
COORDINATES: protein motif:HMM:NF014071.2
hydantoinase/oxoprolinase family protein
COORDINATES: protein motif:HMM:NF014664.2
carboxymuconolactone decarboxylase family protein
COORDINATES: protein motif:HMM:NF014296.2
methylenetetrahydrofolate reductase C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013707211.1
bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase
COORDINATES: protein motif:HMM:NF012515.2
COORDINATES: protein motif:HMM:NF012360.2
COORDINATES: protein motif:HMM:TIGR00152.1
GO:0004140 - dephospho-CoA kinase activity [Evidence IEA]
Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF012787.2
COORDINATES: similar to AA sequence:RefSeq:WP_011416366.1
COORDINATES: similar to AA sequence:RefSeq:WP_011417836.1
COORDINATES: similar to AA sequence:RefSeq:WP_014812905.1
glycogen/starch/alpha-glucan phosphorylase
COORDINATES: similar to AA sequence:RefSeq:WP_011417840.1
COORDINATES: protein motif:HMM:TIGR00121.1
GO:0004077 - biotin-[acetyl-CoA-carboxylase] ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013707095.1
GO:0004514 - nicotinate-nucleotide diphosphorylase (carboxylating) activity [Evidence IEA]
GO:0019363 - pyridine nucleotide biosynthetic process [Evidence IEA]
carboxylating nicotinate-nucleotide diphosphorylase
COORDINATES: similar to AA sequence:RefSeq:WP_014811457.1
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004832 - valine-tRNA ligase activity [Evidence IEA]
GO:0006438 - valyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF012613.2
S-layer homology domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011417845.1
COORDINATES: protein motif:HMM:TIGR00585.2
COORDINATES: protein motif:HMM:NF015724.2
COORDINATES: protein motif:HMM:NF027862.2
flagellar assembly protein T N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF016228.2
GO:0008831 - dTDP-4-dehydrorhamnose reductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00071.1
GO:0009982 - pseudouridine synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006863552.1
COORDINATES: similar to AA sequence:RefSeq:WP_013707725.1
COORDINATES: protein motif:HMM:TIGR00464.1
COORDINATES: similar to AA sequence:RefSeq:WP_011417862.1
GO:0008685 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity [Evidence IEA]
GO:0019288 - isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway [Evidence IEA]
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
COORDINATES: similar to AA sequence:RefSeq:WP_011417864.1
GO:0050518 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity [Evidence IEA]
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_013705678.1
COORDINATES: similar to AA sequence:RefSeq:WP_013705679.1
COORDINATES: similar to AA sequence:RefSeq:WP_014807985.1
COORDINATES: similar to AA sequence:RefSeq:WP_011417869.1
GO:0004719 - protein-L-isoaspartate (D-aspartate) O-methyltransferase activity [Evidence IEA]
protein-L-isoaspartate(D-aspartate) O-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_013705940.1
COORDINATES: protein motif:HMM:NF017103.2
tRNA1(Val) (adenine(37)-N6)-methyltransferase
COORDINATES: protein motif:HMM:NF018004.2
COORDINATES: protein motif:HMM:TIGR02354.1
sulfur carrier protein ThiS adenylyltransferase ThiF
COORDINATES: protein motif:HMM:TIGR02351.2
GO:0016829 - lyase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF017501.2
COORDINATES: protein motif:HMM:TIGR01683.1
COORDINATES: protein motif:HMM:TIGR00693.1
GO:0004789 - thiamine-phosphate diphosphorylase activity [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00059
TPP riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_002508756.1
GO:0004124 - cysteine synthase activity [Evidence IEA]
GO:0006535 - cysteine biosynthetic process from serine [Evidence IEA]
COORDINATES: protein motif:HMM:NF016213.2
COORDINATES: protein motif:HMM:TIGR02517.1
GO:0015627 - type II protein secretion system complex [Evidence IEA]
GO:0015628 - protein secretion by the type II secretion system [Evidence IEA]
COORDINATES: protein motif:HMM:NF015867.2
COORDINATES: protein motif:HMM:TIGR02532.1
COORDINATES: similar to AA sequence:RefSeq:WP_013705789.1
type II secretion system major pseudopilin GspG
COORDINATES: protein motif:HMM:TIGR02024.1
GO:0030412 - formimidoyltetrahydrofolate cyclodeaminase activity [Evidence IEA]; GO:0030409 - glutamate formimidoyltransferase activity [Evidence IEA]
GO:0019556 - histidine catabolic process to glutamate and formamide [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00064.1
GO:0003924 - GTPase activity [Evidence IEA]; GO:0005047 - signal recognition particle binding [Evidence IEA]
signal recognition particle-docking protein FtsY
ABC-F family ATP-binding cassette domain-containing protein
COORDINATES: protein motif:HMM:NF014912.2
COORDINATES: protein motif:HMM:NF037997.1
COORDINATES: similar to AA sequence:RefSeq:WP_013707102.1
COORDINATES: similar to AA sequence:RefSeq:WP_013707448.1
GO:0016853 - isomerase activity [Evidence IEA]
KpsF/GutQ family sugar-phosphate isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_014811134.1
COORDINATES: similar to AA sequence:RefSeq:WP_014810272.1
GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]
nickel pincer cofactor biosynthesis protein LarB
COORDINATES: protein motif:HMM:TIGR00268.1
GO:0016783 - sulfurtransferase activity [Evidence IEA]
ATP-dependent sacrificial sulfur transferase LarE
COORDINATES: protein motif:HMM:NF014072.2
nickel pincer cofactor biosynthesis protein LarC
COORDINATES: similar to AA sequence:RefSeq:WP_011417917.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0016151 - nickel cation binding [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]; GO:0010045 - response to nickel cation [Evidence IEA]
nickel-responsive transcriptional regulator NikR
COORDINATES: protein motif:HMM:NF012993.2
COORDINATES: protein motif:HMM:NF012584.2
COORDINATES: similar to AA sequence:RefSeq:WP_014810436.1
glutaconyl-CoA decarboxylase subunit alpha
COORDINATES: protein motif:HMM:NF024214.2
COORDINATES: protein motif:HMM:NF024703.2
COORDINATES: protein motif:HMM:NF017843.2
class I SAM-dependent DNA methyltransferase
COORDINATES: protein motif:HMM:NF013579.2
COORDINATES: protein motif:HMM:TIGR00348.1
type I restriction endonuclease subunit R
pilus assembly PilX N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF021106.2
COORDINATES: protein motif:HMM:NF012464.2
COORDINATES: protein motif:HMM:NF015596.2
COORDINATES: protein motif:HMM:NF024212.2
COORDINATES: similar to AA sequence:RefSeq:WP_011418342.1
GO:0016746 - acyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011418341.1
COORDINATES: similar to AA sequence:RefSeq:WP_011418340.1
GO:0047761 - butyrate kinase activity [Evidence IEA]
GO:0006113 - fermentation [Evidence IEA]
COORDINATES: protein motif:HMM:NF014573.2
COORDINATES: protein motif:HMM:NF024732.2
COORDINATES: protein motif:HMM:NF039362.1
COORDINATES: protein motif:HMM:NF014886.2
COORDINATES: protein motif:HMM:NF012503.2
GO:0016831 - carboxy-lyase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO:0019752 - carboxylic acid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011417301.1
COORDINATES: protein motif:HMM:NF019819.2
COORDINATES: protein motif:HMM:NF013382.2
COORDINATES: similar to AA sequence:RefSeq:WP_011417420.1
COORDINATES: protein motif:HMM:NF017669.2
COORDINATES: similar to AA sequence:RefSeq:WP_014812037.1
COORDINATES: protein motif:HMM:NF019474.2
GO:0016209 - antioxidant activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024859.2
COORDINATES: protein motif:HMM:NF012356.2
COORDINATES: protein motif:HMM:NF016143.2
COORDINATES: protein motif:HMM:NF024937.2
COORDINATES: protein motif:HMM:NF021511.2
COORDINATES: protein motif:HMM:NF014794.2
COORDINATES: similar to AA sequence:RefSeq:WP_014810364.1
COORDINATES: similar to AA sequence:RefSeq:WP_011418011.1
GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: protein motif:HMM:NF014045.2
COORDINATES: similar to AA sequence:RefSeq:WP_011418237.1
COORDINATES: protein motif:HMM:TIGR00652.1
COORDINATES: protein motif:HMM:NF022607.2
COORDINATES: similar to AA sequence:RefSeq:WP_013705736.1
COORDINATES: protein motif:HMM:NF006749.0
COORDINATES: similar to AA sequence:RefSeq:WP_011416353.1
COORDINATES: protein motif:HMM:NF001299.0
GO:0016787 - hydrolase activity [Evidence IEA]; GO:0000210 - NAD+ diphosphatase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013777.2
COORDINATES: protein motif:HMM:NF013098.2
COORDINATES: similar to AA sequence:RefSeq:WP_000509876.1
metal-sensitive transcriptional regulator
COORDINATES: protein motif:HMM:NF024644.2
COORDINATES: protein motif:HMM:NF013460.2
cytochrome b/b6 domain-containing protein
COORDINATES: protein motif:HMM:TIGR00551.1
COORDINATES: protein motif:HMM:TIGR00005.1
COORDINATES: protein motif:HMM:NF015451.2
COORDINATES: protein motif:HMM:NF037981.1
GO:0022857 - transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011418619.1
COORDINATES: protein motif:HMM:TIGR00752.1
COORDINATES: protein motif:HMM:NF015782.2
COORDINATES: protein motif:HMM:NF023418.2
DUF3488 and transglutaminase-like domain-containing protein
COORDINATES: protein motif:HMM:NF013998.2
COORDINATES: protein motif:HMM:NF036831.2
COORDINATES: protein motif:HMM:NF019346.2
COORDINATES: protein motif:HMM:NF014717.2
COORDINATES: protein motif:HMM:NF018805.2
COORDINATES: protein motif:HMM:NF022317.2
COORDINATES: protein motif:HMM:TIGR00253.1
ribosome assembly RNA-binding protein YhbY
COORDINATES: protein motif:HMM:NF025715.2
COORDINATES: protein motif:HMM:NF017007.2
COORDINATES: similar to AA sequence:RefSeq:WP_011418077.1
GO:0008759 - UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity [Evidence IEA]
GO:0009245 - lipid A biosynthetic process [Evidence IEA]
UDP-3-O-acyl-N-acetylglucosamine deacetylase
COORDINATES: protein motif:HMM:NF004208.0
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01391.1
GO:0003896 - DNA primase activity [Evidence IEA]
GO:0006269 - DNA replication, synthesis of RNA primer [Evidence IEA]
COORDINATES: protein motif:HMM:NF020977.2
histidine triad nucleotide-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_011418082.1
GO:0003949 - 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase activity [Evidence IEA]
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_013707722.1
GO:0004424 - imidazoleglycerol-phosphate dehydratase activity [Evidence IEA]
imidazoleglycerol-phosphate dehydratase HisB
COORDINATES: protein motif:HMM:NF013773.2
GO:0003879 - ATP phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011418088.1
GO:0004635 - phosphoribosyl-AMP cyclohydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011417318.1
COORDINATES: protein motif:HMM:NF013232.2
MTAP family purine nucleoside phosphorylase
COORDINATES: similar to AA sequence:RefSeq:WP_014809522.1
GO:0015036 - disulfide oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03302.1
outer membrane protein assembly factor BamD
COORDINATES: protein motif:HMM:NF025052.2
bifunctional aminoglycoside phosphotransferase/ATP-binding protein
COORDINATES: protein motif:HMM:NF001753.0
Sir2 family NAD-dependent protein deacetylase
COORDINATES: protein motif:HMM:NF007113.1
nucleoside triphosphate pyrophosphohydrolase
COORDINATES: protein motif:HMM:NF021366.2
COORDINATES: protein motif:HMM:TIGR00113.1
GO:0016853 - isomerase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]
tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA
COORDINATES: similar to AA sequence:RefSeq:WP_013707572.1
GO:0008479 - queuine tRNA-ribosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014812592.1
COORDINATES: similar to AA sequence:RefSeq:WP_014812591.1
GO:0031522 - cell envelope Sec protein transport complex [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00966.2
COORDINATES: similar to AA sequence:RefSeq:WP_013706587.1
GO:0009306 - protein secretion [Evidence IEA]; GO:0006465 - signal peptide processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014810429.1
COORDINATES: protein motif:HMM:NF015413.2
COORDINATES: protein motif:HMM:NF003547.0
GO:0009116 - nucleoside metabolic process [Evidence IEA]
bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR
COORDINATES: similar to AA sequence:RefSeq:WP_013705023.1
GO:0016597 - amino acid binding [Evidence IEA]; GO:0004070 - aspartate carbamoyltransferase activity [Evidence IEA]
GO:0006207 - 'de novo' pyrimidine nucleobase biosynthetic process [Evidence IEA]; GO:0006520 - cellular amino acid metabolic process [Evidence IEA]
aspartate carbamoyltransferase catalytic subunit
COORDINATES: similar to AA sequence:RefSeq:WP_011418111.1
COORDINATES: protein motif:HMM:TIGR00400.1
GO:0015095 - magnesium ion transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00613.1
COORDINATES: similar to AA sequence:RefSeq:WP_011418114.1
GO:0009345 - glycine-tRNA ligase complex [Evidence IEA]
GO:0004820 - glycine-tRNA ligase activity [Evidence IEA]
GO:0006426 - glycyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011418115.1
COORDINATES: similar to AA sequence:RefSeq:WP_011417367.1
fibronectin type III domain-containing protein
COORDINATES: protein motif:HMM:TIGR02533.1
COORDINATES: protein motif:HMM:TIGR02120.1
type II secretion system inner membrane protein GspF
COORDINATES: protein motif:HMM:NF019575.2
COORDINATES: protein motif:HMM:NF022554.2
COORDINATES: protein motif:HMM:NF016493.2
COORDINATES: protein motif:HMM:NF022800.2
COORDINATES: protein motif:HMM:NF013411.2
GO:0008616 - queuosine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014811681.1
COORDINATES: similar to AA sequence:RefSeq:WP_011418140.1
COORDINATES: protein motif:HMM:NF016107.2
isoprenylcysteine carboxylmethyltransferase family protein
COORDINATES: protein motif:HMM:NF014645.2
GO:0009029 - tetraacyldisaccharide 4'-kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011418143.1
GO:0005319 - lipid transporter activity [Evidence IEA]
GO:0006869 - lipid transport [Evidence IEA]
lipid A export permease/ATP-binding protein MsbA
COORDINATES: protein motif:HMM:TIGR00215.1
GO:0008915 - lipid-A-disaccharide synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013567.2
COORDINATES: similar to AA sequence:RefSeq:WP_011418146.1
GO:0008780 - acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity [Evidence IEA]
acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_011418147.1
UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase
COORDINATES: protein motif:HMM:NF015871.2
COORDINATES: protein motif:HMM:TIGR03303.1
outer membrane protein assembly factor BamA
COORDINATES: similar to AA sequence:RefSeq:WP_011418150.1
COORDINATES: similar to AA sequence:RefSeq:WP_013707644.1
GO:0042953 - lipoprotein transport [Evidence IEA]
lipoprotein-releasing ABC transporter permease subunit
COORDINATES: similar to AA sequence:RefSeq:WP_013707645.1
GO:0004824 - lysine-tRNA ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00621.2
COORDINATES: similar to AA sequence:RefSeq:WP_011418154.1
twin-arginine translocase TatA/TatE family subunit
COORDINATES: protein motif:HMM:NF024855.2
COORDINATES: similar to AA sequence:RefSeq:WP_014809155.1
COORDINATES: protein motif:HMM:NF013961.2
transglutaminase domain-containing protein
COORDINATES: protein motif:HMM:NF013227.2
COORDINATES: protein motif:HMM:NF013245.2
COORDINATES: similar to AA sequence:RefSeq:WP_011418177.1
COORDINATES: protein motif:HMM:NF014425.2
GO:0000030 - mannosyltransferase activity [Evidence IEA]
GO:0006493 - protein O-linked glycosylation [Evidence IEA]
phospholipid carrier-dependent glycosyltransferase
COORDINATES: protein motif:HMM:NF019966.2
COORDINATES: similar to AA sequence:RefSeq:WP_011416933.1
COORDINATES: similar to AA sequence:RefSeq:WP_012446956.1
glycine/sarcosine/betaine reductase complex selenoprotein A
COORDINATES: protein motif:HMM:NF040746.1
glycine/sarcosine/betaine reductase complex component C subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_011345263.1
GO:0030700 - glycine reductase complex [Evidence IEA]
GO:0030699 - glycine reductase activity [Evidence IEA]
glycine reductase complex selenoprotein B
COORDINATES: similar to AA sequence:RefSeq:WP_012623764.1
glycine/sarcosine/betaine reductase component B subunit
COORDINATES: protein motif:HMM:NF012770.2
COORDINATES: protein motif:HMM:NF020940.2
COORDINATES: protein motif:HMM:TIGR00420.1
GO:0016783 - sulfurtransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00089.1
tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase MtaB
COORDINATES: protein motif:HMM:TIGR02191.1
GO:0004525 - ribonuclease III activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011418200.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03594.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF024850.2
branched-chain amino acid ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_003082133.1
branched-chain amino acid ABC transporter permease
COORDINATES: protein motif:HMM:NF008450.0
GO:0015658 - branched-chain amino acid transmembrane transporter activity [Evidence IEA]
high-affinity branched-chain amino acid ABC transporter permease LivM
COORDINATES: similar to AA sequence:RefSeq:WP_013706221.1
COORDINATES: similar to AA sequence:RefSeq:WP_013706961.1
COORDINATES: similar to AA sequence:RefSeq:WP_011418208.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01007.1
GO:0045226 - extracellular polysaccharide biosynthetic process [Evidence IEA]
polysaccharide biosynthesis tyrosine autokinase
COORDINATES: protein motif:HMM:NF024793.2
COORDINATES: similar to AA sequence:RefSeq:WP_011417042.1
COORDINATES: similar to AA sequence:RefSeq:WP_011418220.1
GO:0004518 - nuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011418221.1
GO:0003723 - RNA binding [Evidence IEA]; GO:0004523 - RNA-DNA hybrid ribonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011418222.1
COORDINATES: protein motif:HMM:NF021455.2
COORDINATES: similar to AA sequence:RefSeq:WP_011418224.1
GO:0052906 - tRNA (guanine(37)-N(1))-methyltransferase activity [Evidence IEA]
tRNA (guanosine(37)-N1)-methyltransferase TrmD
COORDINATES: protein motif:HMM:TIGR02273.1
Essential for efficient processing of 16S rRNA; Essential for efficient processing of 16S rRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_011418227.1
COORDINATES: similar to AA sequence:RefSeq:WP_018286751.1
GO:0048501 - signal recognition particle, plasma membrane targeting [Evidence IEA]
GO:0003924 - GTPase activity [Evidence IEA]; GO:0005048 - signal sequence binding [Evidence IEA]
GO:0042834 - peptidoglycan binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011418230.1
GO:0004814 - arginine-tRNA ligase activity [Evidence IEA]
GO:0006420 - arginyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF025699.2
PilX N-terminal domain-containing pilus assembly protein
COORDINATES: protein motif:HMM:NF023444.2
COORDINATES: similar to AA sequence:RefSeq:WP_011418022.1
COORDINATES: similar to AA sequence:RefSeq:WP_014808366.1
dTDP-4-dehydrorhamnose 3,5-epimerase family protein
COORDINATES: protein motif:HMM:TIGR00326.1
GO:0008703 - 5-amino-6-(5-phosphoribosylamino)uracil reductase activity [Evidence IEA]; GO:0008835 - diaminohydroxyphosphoribosylaminopyrimidine deaminase activity [Evidence IEA]
bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
COORDINATES: protein motif:HMM:NF013646.2
COORDINATES: protein motif:HMM:NF033644.1
UpxY family transcription antiterminator
COORDINATES: protein motif:HMM:NF012684.2
peptide chain release factor-like protein
COORDINATES: protein motif:HMM:NF037131.2
Lrp/AsnC family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_011418246.1
GO:0042286 - glutamate-1-semialdehyde 2,1-aminomutase activity [Evidence IEA]
glutamate-1-semialdehyde 2,1-aminomutase
COORDINATES: similar to AA sequence:RefSeq:WP_017944086.1
GO:0008446 - GDP-mannose 4,6-dehydratase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF027681.2
COORDINATES: protein motif:HMM:NF021073.2
COORDINATES: protein motif:HMM:NF015834.2
COORDINATES: similar to AA sequence:RefSeq:WP_011418251.1
COORDINATES: similar to AA sequence:RefSeq:WP_011418252.1
ribosome biogenesis GTP-binding protein YihA/YsxC
COORDINATES: similar to AA sequence:RefSeq:WP_014812034.1
COORDINATES: protein motif:HMM:NF020123.2
COORDINATES: protein motif:HMM:TIGR00100.1
GO:0008901 - ferredoxin hydrogenase activity [Evidence IEA]
hydrogenase maturation nickel metallochaperone HypA
COORDINATES: protein motif:HMM:NF013611.2
HypC/HybG/HupF family hydrogenase formation chaperone
COORDINATES: protein motif:HMM:NF014034.2
GO:0016530 - metallochaperone activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00073.1
GO:0016530 - metallochaperone activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
hydrogenase nickel incorporation protein HypB
COORDINATES: protein motif:HMM:TIGR00143.1
GO:0003998 - acylphosphatase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02124.1
hydrogenase expression/formation protein HypE
COORDINATES: similar to AA sequence:RefSeq:WP_011940192.1
COORDINATES: similar to AA sequence:RefSeq:WP_011416059.1
COORDINATES: similar to AA sequence:RefSeq:WP_011416058.1
COORDINATES: similar to AA sequence:RefSeq:WP_013705161.1
GO:0004355 - glutamate synthase (NADPH) activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014810261.1
sulfide/dihydroorotate dehydrogenase-like FAD/NAD-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_014813195.1
COORDINATES: similar to AA sequence:RefSeq:WP_013705274.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF012546.2
COORDINATES: similar to AA sequence:RefSeq:WP_011418299.1
COORDINATES: protein motif:HMM:NF014635.2
COORDINATES: protein motif:HMM:NF014826.2
COORDINATES: similar to AA sequence:RefSeq:WP_011418330.1
COORDINATES: similar to AA sequence:RefSeq:WP_011417058.1
COORDINATES: similar to AA sequence:RefSeq:WP_011418591.1
COORDINATES: protein motif:HMM:NF014135.2
COORDINATES: similar to AA sequence:RefSeq:WP_011418274.1
aminoglycoside phosphotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011417291.1
COORDINATES: similar to AA sequence:RefSeq:WP_004627468.1
COORDINATES: protein motif:HMM:NF024585.2
COORDINATES: similar to AA sequence:RefSeq:WP_014807924.1
2-oxoacid:acceptor oxidoreductase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_013707597.1
2-oxoacid:ferredoxin oxidoreductase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_013706818.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO:0006099 - tricarboxylic acid cycle [Evidence IEA]
ADP-forming succinate--CoA ligase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_013706817.1
COORDINATES: protein motif:HMM:NF024895.2
COORDINATES: protein motif:HMM:NF015147.2
COORDINATES: protein motif:HMM:NF018884.2
PP2C family protein-serine/threonine phosphatase
COORDINATES: similar to AA sequence:RefSeq:WP_011417995.1
COORDINATES: similar to AA sequence:RefSeq:WP_011418284.1
COORDINATES: similar to AA sequence:RefSeq:WP_014812759.1
COORDINATES: protein motif:HMM:NF015692.2
COORDINATES: similar to AA sequence:RefSeq:WP_010965865.1
COORDINATES: protein motif:HMM:NF013741.2
COORDINATES: protein motif:HMM:TIGR02504.1
GO:0004748 - ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor [Evidence IEA]
adenosylcobalamin-dependent ribonucleoside-diphosphate reductase
COORDINATES: similar to AA sequence:RefSeq:WP_011417964.1
COORDINATES: similar to AA sequence:RefSeq:WP_011417963.1
COORDINATES: protein motif:HMM:NF009007.0
COORDINATES: protein motif:HMM:NF014542.2
COORDINATES: protein motif:HMM:NF005993.0
aspartate aminotransferase family protein
GO:0006813 - potassium ion transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF016843.2
COORDINATES: similar to AA sequence:RefSeq:WP_014808578.1
COORDINATES: protein motif:HMM:NF028293.2
COORDINATES: protein motif:HMM:NF017760.2
COORDINATES: similar to AA sequence:RefSeq:WP_011418354.1
GO:0003987 - acetate-CoA ligase activity [Evidence IEA]
GO:0019427 - acetyl-CoA biosynthetic process from acetate [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR04038.1
TatD family nuclease-associated radical SAM protein
COORDINATES: similar to AA sequence:RefSeq:WP_013705897.1
COORDINATES: similar to AA sequence:RefSeq:WP_013707766.1
vitamin B12-dependent ribonucleotide reductase
COORDINATES: similar to AA sequence:RefSeq:WP_003153447.1
COORDINATES: similar to AA sequence:RefSeq:WP_011418308.1
COORDINATES: similar to AA sequence:RefSeq:WP_011416604.1
COORDINATES: protein motif:HMM:NF014057.2
COORDINATES: similar to AA sequence:RefSeq:WP_014811582.1
AmmeMemoRadiSam system radical SAM enzyme
COORDINATES: protein motif:HMM:NF012780.2
COORDINATES: similar to AA sequence:RefSeq:WP_013707368.1
COORDINATES: protein motif:HMM:NF037947.1
COORDINATES: similar to AA sequence:RefSeq:WP_000118520.1
quaternary ammonium compound efflux SMR transporter SugE
COORDINATES: protein motif:HMM:TIGR00129.1
GO:0009061 - anaerobic respiration [Evidence IEA]; GO:0015942 - formate metabolic process [Evidence IEA]
formate dehydrogenase accessory sulfurtransferase FdhD
COORDINATES: protein motif:HMM:NF013738.2
iron-sulfur cluster assembly scaffold protein
COORDINATES: similar to AA sequence:RefSeq:WP_014812460.1
COORDINATES: similar to AA sequence:RefSeq:WP_013707322.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0030151 - molybdenum ion binding [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014810157.1
COORDINATES: similar to AA sequence:RefSeq:WP_014810661.1
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase
COORDINATES: similar to AA sequence:RefSeq:WP_011418385.1
COORDINATES: protein motif:HMM:TIGR02081.1
GO:0009086 - methionine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01392.1
GO:0016747 - acyltransferase activity, transferring groups other than amino-acyl groups [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00738.1
COORDINATES: protein motif:HMM:NF013936.2
GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [Evidence IEA]
COORDINATES: protein motif:HMM:NF025030.2
COORDINATES: protein motif:HMM:NF025017.2
COORDINATES: protein motif:HMM:NF020771.2
CerR family C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011418408.1
COORDINATES: protein motif:HMM:NF013132.2
COORDINATES: protein motif:HMM:NF013397.2
formate/nitrite transporter family protein
COORDINATES: protein motif:HMM:NF005325.0
indolepyruvate oxidoreductase subunit beta
COORDINATES: protein motif:HMM:TIGR03336.1
GO:0043805 - indolepyruvate ferredoxin oxidoreductase activity [Evidence IEA]
indolepyruvate ferredoxin oxidoreductase subunit alpha
COORDINATES: protein motif:HMM:NF040320.1
COORDINATES: similar to AA sequence:RefSeq:WP_013706955.1
COORDINATES: protein motif:HMM:NF039354.1
COORDINATES: similar to AA sequence:RefSeq:WP_014809814.1
sigma-54-dependent Fis family transcriptional regulator
COORDINATES: protein motif:HMM:NF014620.2
NifB/NifX family molybdenum-iron cluster-binding protein
COORDINATES: protein motif:HMM:NF013793.2
COORDINATES: similar to AA sequence:RefSeq:WP_014809822.1
COORDINATES: similar to AA sequence:RefSeq:WP_011418459.1
GO:0005506 - iron ion binding [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
GO:0016226 - iron-sulfur cluster assembly [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011416977.1
COORDINATES: similar to AA sequence:RefSeq:WP_014809818.1
COORDINATES: similar to AA sequence:RefSeq:WP_014809819.1
COORDINATES: protein motif:HMM:NF015949.2
COORDINATES: similar to AA sequence:RefSeq:WP_014809829.1
tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO
COORDINATES: protein motif:HMM:TIGR01297.1
GO:0008324 - cation transmembrane transporter activity [Evidence IEA]; GO:0015562 - efflux transmembrane transporter activity [Evidence IEA]
GO:0006812 - cation transport [Evidence IEA]
cation diffusion facilitator family transporter
COORDINATES: protein motif:HMM:NF036294.2
COORDINATES: protein motif:HMM:NF014774.2
heterodisulfide reductase-related iron-sulfur binding cluster
COORDINATES: protein motif:HMM:NF013714.2
COORDINATES: protein motif:HMM:NF014582.2
COORDINATES: similar to AA sequence:RefSeq:WP_011418456.1
tungstate ABC transporter substrate-binding protein WtpA
COORDINATES: similar to AA sequence:RefSeq:WP_011418429.1
COORDINATES: protein motif:HMM:NF014035.2
sulfite exporter TauE/SafE family protein
COORDINATES: protein motif:HMM:TIGR01891.1
GO:0004180 - carboxypeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014809320.1
COORDINATES: protein motif:HMM:TIGR02607.1
COORDINATES: similar to AA sequence:RefSeq:WP_014811910.1
GO:0003862 - 3-isopropylmalate dehydrogenase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]
GO:0009098 - leucine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011418468.1
GO:0003852 - 2-isopropylmalate synthase activity [Evidence IEA]
GO:0019752 - carboxylic acid metabolic process [Evidence IEA]; GO:0009098 - leucine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011418469.1
GO:0009316 - 3-isopropylmalate dehydratase complex [Evidence IEA]
GO:0003861 - 3-isopropylmalate dehydratase activity [Evidence IEA]
3-isopropylmalate dehydratase large subunit
COORDINATES: similar to AA sequence:RefSeq:WP_013707829.1
3-isopropylmalate dehydratase small subunit
COORDINATES: similar to AA sequence:RefSeq:WP_014811998.1
GO:0003963 - RNA-3'-phosphate cyclase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014615.2
homocysteine S-methyltransferase family protein
COORDINATES: protein motif:HMM:TIGR00336.1
GO:0004588 - orotate phosphoribosyltransferase activity [Evidence IEA]
GO:0009220 - pyrimidine ribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013755.2
COORDINATES: protein motif:HMM:NF005334.0
COORDINATES: protein motif:HMM:NF025054.2
COORDINATES: protein motif:HMM:NF020265.2
COORDINATES: protein motif:HMM:NF017857.2
COORDINATES: similar to AA sequence:RefSeq:WP_011418508.1
nucleoside-diphosphate sugar epimerase/dehydratase
COORDINATES: similar to AA sequence:RefSeq:WP_004277598.1
COORDINATES: protein motif:HMM:NF019552.2
COORDINATES: protein motif:HMM:TIGR00236.1
GO:0008761 - UDP-N-acetylglucosamine 2-epimerase activity [Evidence IEA]
UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)
COORDINATES: protein motif:HMM:TIGR01536.1
GO:0004066 - asparagine synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0006529 - asparagine biosynthetic process [Evidence IEA]
asparagine synthase (glutamine-hydrolyzing)
COORDINATES: protein motif:HMM:NF014893.2
COORDINATES: protein motif:HMM:NF028199.2
COORDINATES: similar to AA sequence:RefSeq:WP_000605938.1
GO:0004476 - mannose-6-phosphate isomerase activity [Evidence IEA]; GO:0008905 - mannose-phosphate guanylyltransferase activity [Evidence IEA]
mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_010929614.1
COORDINATES: similar to AA sequence:RefSeq:WP_011418489.1
COORDINATES: protein motif:HMM:NF024968.2
COORDINATES: protein motif:HMM:NF013681.2
COORDINATES: protein motif:HMM:NF025072.2
COORDINATES: protein motif:HMM:NF021616.2
COORDINATES: protein motif:HMM:NF033581.1
COORDINATES: similar to AA sequence:RefSeq:WP_011418167.1
COORDINATES: protein motif:HMM:NF016850.2
cephalosporin hydroxylase family protein
COORDINATES: protein motif:HMM:NF020073.2
COORDINATES: protein motif:HMM:TIGR01221.1
GO:0008830 - dTDP-4-dehydrorhamnose 3,5-epimerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000648783.1
GO:0047343 - glucose-1-phosphate cytidylyltransferase activity [Evidence IEA]
glucose-1-phosphate cytidylyltransferase
COORDINATES: protein motif:HMM:TIGR02622.1
GO:0047733 - CDP-glucose 4,6-dehydratase activity [Evidence IEA]
GO:0009243 - O antigen biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002221803.1
GO:0008879 - glucose-1-phosphate thymidylyltransferase activity [Evidence IEA]
glucose-1-phosphate thymidylyltransferase RfbA
COORDINATES: protein motif:HMM:TIGR04176.1
MarR family EPS-associated transcriptional regulator
COORDINATES: protein motif:HMM:TIGR01930.1
COORDINATES: protein motif:HMM:NF003160.0
2,3-bisphosphoglycerate-independent phosphoglycerate mutase
COORDINATES: similar to AA sequence:RefSeq:WP_014810302.1
COORDINATES: protein motif:HMM:NF015316.2
outer membrane protein transport protein
COORDINATES: protein motif:HMM:NF014695.2
COORDINATES: similar to AA sequence:RefSeq:WP_014811789.1
electron transfer flavoprotein subunit alpha/FixB family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014811788.1
electron transfer flavoprotein subunit beta/FixA family protein
COORDINATES: protein motif:HMM:NF001208.0
COORDINATES: protein motif:HMM:TIGR03156.1
COORDINATES: protein motif:HMM:NF016311.2
3-deoxy-D-manno-octulosonic acid transferase
COORDINATES: similar to AA sequence:RefSeq:WP_003210966.1
GO:0004750 - D-ribulose-phosphate 3-epimerase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF017774.2
COORDINATES: protein motif:HMM:TIGR01128.1
COORDINATES: similar to AA sequence:RefSeq:WP_014810444.1
COORDINATES: similar to AA sequence:RefSeq:WP_011418554.1
COORDINATES: protein motif:HMM:NF002270.0
COORDINATES: protein motif:HMM:NF024820.2
COORDINATES: protein motif:HMM:NF022459.2
secretin and TonB N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF016254.2
COORDINATES: protein motif:HMM:NF016253.2
COORDINATES: protein motif:HMM:NF016992.2
COORDINATES: protein motif:HMM:TIGR01175.1
COORDINATES: protein motif:HMM:NF016839.2
septum formation initiator family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014810347.1
COORDINATES: similar to AA sequence:RefSeq:WP_011418566.1
GO:0004170 - dUTP diphosphatase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]
GO:0006226 - dUMP biosynthetic process [Evidence IEA]; GO:0046081 - dUTP catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011418567.1
GO:0004654 - polyribonucleotide nucleotidyltransferase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO:0006402 - mRNA catabolic process [Evidence IEA]; GO:0006396 - RNA processing [Evidence IEA]
polyribonucleotide nucleotidyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_011275926.1
COORDINATES: protein motif:HMM:TIGR00431.1
GO:0004730 - pseudouridylate synthase activity [Evidence IEA]
bifunctional oligoribonuclease/PAP phosphatase NrnA
COORDINATES: similar to AA sequence:RefSeq:WP_011418572.1
GO:0019843 - rRNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF016351.2
COORDINATES: protein motif:HMM:TIGR00487.1
COORDINATES: protein motif:HMM:TIGR01953.1
COORDINATES: protein motif:HMM:NF014617.2
COORDINATES: protein motif:HMM:NF013013.2
GO:0004399 - histidinol dehydrogenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011418578.1
GO:0008760 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity [Evidence IEA]
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
COORDINATES: protein motif:HMM:TIGR00536.1
GO:0018364 - peptidyl-glutamine methylation [Evidence IEA]; GO:0006412 - translation [Evidence IEA]
peptide chain release factor N(5)-glutamine methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_011418580.1
COORDINATES: similar to AA sequence:RefSeq:WP_011418581.1
COORDINATES: similar to AA sequence:RefSeq:WP_014811773.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0008186 - ATP-dependent activity, acting on RNA [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF014619.2
COORDINATES: similar to AA sequence:RefSeq:WP_013705904.1
GO:0004125 - L-seryl-tRNASec selenium transferase activity [Evidence IEA]
GO:0016260 - selenocysteine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF006385.0
coproporphyrinogen III oxidase family protein
COORDINATES: protein motif:HMM:NF013492.2
GO:0042586 - peptide deformylase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF002558.0
COORDINATES: protein motif:HMM:NF022233.2
tetraprenyl-beta-curcumene synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011418289.1
COORDINATES: similar to AA sequence:RefSeq:WP_001693358.1
GO:0006094 - gluconeogenesis [Evidence IEA]; GO:0019682 - glyceraldehyde-3-phosphate metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
type I glyceraldehyde-3-phosphate dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_014810941.1
COORDINATES: similar to AA sequence:RefSeq:WP_014808879.1
COORDINATES: similar to AA sequence:RefSeq:WP_011011789.1
COORDINATES: protein motif:HMM:NF014713.2
COORDINATES: similar to AA sequence:RefSeq:WP_011418605.1
GO:0004417 - hydroxyethylthiazole kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF001244.0
GO:0052624 - 2-phytyl-1,4-naphthoquinone methyltransferase activity [Evidence IEA]
GO:0042372 - phylloquinone biosynthetic process [Evidence IEA]
bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE
COORDINATES: protein motif:HMM:NF017964.2
COORDINATES: similar to AA sequence:RefSeq:WP_013707234.1
COORDINATES: protein motif:HMM:NF015957.2
COORDINATES: similar to AA sequence:RefSeq:WP_011418616.1
GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0004523 - RNA-DNA hybrid ribonuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00176.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0005525 - GTP binding [Evidence IEA]
molybdopterin-guanine dinucleotide biosynthesis protein B
COORDINATES: similar to AA sequence:RefSeq:WP_011418053.1
COORDINATES: protein motif:HMM:NF012933.2
COORDINATES: protein motif:HMM:NF006375.0
GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012349.2
GO:0004807 - triose-phosphate isomerase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00810.1
COORDINATES: similar to AA sequence:RefSeq:WP_019271087.1
COORDINATES: similar to AA sequence:RefSeq:WP_014808679.1
GO:0004519 - endonuclease activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
GO:0051607 - defense response to virus [Evidence IEA]; GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
type I-C CRISPR-associated endonuclease Cas1c
COORDINATES: protein motif:HMM:TIGR00372.1
GO:0004518 - nuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF016963.2
type I-C CRISPR-associated protein Cas7/Csd2
COORDINATES: protein motif:HMM:TIGR01863.1
type I-C CRISPR-associated protein Cas8c/Csd1
COORDINATES: protein motif:HMM:TIGR01876.1
type I-C CRISPR-associated protein Cas5c
COORDINATES: protein motif:HMM:TIGR01587.1
CRISPR-associated helicase/endonuclease Cas3
COORDINATES: protein motif:HMM:NF024676.2
COORDINATES: protein motif:HMM:NF033823.0
GO:0008237 - metallopeptidase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
archaemetzincin family Zn-dependent metalloprotease
COORDINATES: similar to AA sequence:RefSeq:WP_014812048.1
heavy metal-associated domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_017502066.1
GO:0042625 - ATPase-coupled ion transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF020084.2
COORDINATES: protein motif:HMM:NF012354.2
COORDINATES: protein motif:HMM:NF013677.2
COORDINATES: protein motif:HMM:TIGR00104.1
COORDINATES: protein motif:HMM:NF024869.2
COORDINATES: protein motif:HMM:NF014525.2
COORDINATES: protein motif:HMM:TIGR02805.1
GO:0015078 - proton transmembrane transporter activity [Evidence IEA]; GO:0015291 - secondary active transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF019335.2
TonB-dependent receptor plug domain-containing protein
COORDINATES: protein motif:HMM:NF002326.0
GO:0016793 - triphosphoric monoester hydrolase activity [Evidence IEA]
deoxyguanosinetriphosphate triphosphohydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_013707824.1
COORDINATES: protein motif:HMM:NF016190.2
COORDINATES: similar to AA sequence:RefSeq:WP_014809546.1
GO:0004134 - 4-alpha-glucanotransferase activity [Evidence IEA]
GO:0005980 - glycogen catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01977.1
aminotransferase class V-fold PLP-dependent enzyme
COORDINATES: protein motif:HMM:TIGR03527.1
sulfurtransferase-like selenium metabolism protein YedF
COORDINATES: protein motif:HMM:NF014614.2
cob(I)yrinic acid a,c-diamide adenosyltransferase
COORDINATES: protein motif:HMM:NF003715.0
COORDINATES: similar to AA sequence:RefSeq:WP_014812906.1
GO:0015299 - solute:proton antiporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF016269.2
COORDINATES: similar to AA sequence:RefSeq:WP_012675407.1
COORDINATES: protein motif:HMM:NF025042.2
COORDINATES: protein motif:HMM:TIGR01486.1
COORDINATES: protein motif:HMM:TIGR00341.1
COORDINATES: protein motif:HMM:TIGR03820.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0050066 - lysine 2,3-aminomutase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO:0046440 - L-lysine metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03827.1
putative beta-lysine N-acetyltransferase
COORDINATES: protein motif:HMM:TIGR02283.1
COORDINATES: protein motif:HMM:NF033912.1
COORDINATES: protein motif:HMM:NF013117.2
mechanosensitive ion channel family protein
COORDINATES: protein motif:HMM:NF013173.2
COORDINATES: protein motif:HMM:TIGR00685.1
GO:0004805 - trehalose-phosphatase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013705490.1
COORDINATES: similar to AA sequence:RefSeq:WP_014809215.1
COORDINATES: protein motif:HMM:NF024854.2
COORDINATES: protein motif:HMM:NF039309.1
peptidoglycan DD-metalloendopeptidase family protein
COORDINATES: protein motif:HMM:TIGR00751.1
GO:0046428 - 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity [Evidence IEA]
GO:0009234 - menaquinone biosynthetic process [Evidence IEA]
1,4-dihydroxy-2-naphthoate octaprenyltransferase
COORDINATES: protein motif:HMM:TIGR03695.1
GO:0070205 - 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase activity [Evidence IEA]
2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase
COORDINATES: protein motif:HMM:NF024771.2
COORDINATES: protein motif:HMM:NF007032.0
GO:0015079 - potassium ion transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014398.2
GO:0042597 - periplasmic space [Evidence IEA]
GO:0042279 - nitrite reductase (cytochrome, ammonia-forming) activity [Evidence IEA]
ammonia-forming cytochrome c nitrite reductase subunit c552
COORDINATES: protein motif:HMM:NF015237.2
COORDINATES: similar to AA sequence:RefSeq:WP_011416372.1
COORDINATES: protein motif:HMM:NF039786.1
COORDINATES: protein motif:HMM:NF019498.2
COORDINATES: similar to AA sequence:RefSeq:WP_013707769.1
COORDINATES: similar to AA sequence:RefSeq:WP_014812930.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0008170 - N-methyltransferase activity [Evidence IEA]
GO:0006306 - DNA methylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF021109.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0009036 - type II site-specific deoxyribonuclease activity [Evidence IEA]
GO:0009307 - DNA restriction-modification system [Evidence IEA]
COORDINATES: protein motif:HMM:NF023568.2
COORDINATES: protein motif:HMM:NF015961.2
COORDINATES: similar to AA sequence:RefSeq:WP_013706037.1
COORDINATES: protein motif:HMM:NF021378.2
COORDINATES: similar to AA sequence:RefSeq:WP_011418925.1
COORDINATES: similar to AA sequence:RefSeq:WP_011418926.1
COORDINATES: similar to AA sequence:RefSeq:WP_011418748.1
NAD(P)H-dependent oxidoreductase subunit E
COORDINATES: similar to AA sequence:RefSeq:WP_014809769.1
COORDINATES: similar to AA sequence:RefSeq:WP_015617902.1
COORDINATES: similar to AA sequence:RefSeq:WP_011417771.1
COORDINATES: protein motif:HMM:NF019958.2
COORDINATES: protein motif:HMM:NF021597.2
COORDINATES: similar to AA sequence:RefSeq:WP_011418760.1
Cys-Xaa-Xaa-Xaa repeat radical SAM target protein
COORDINATES: similar to AA sequence:RefSeq:WP_011418759.1
COORDINATES: protein motif:HMM:TIGR04116.1
CXXX repeat peptide modification system protein
COORDINATES: protein motif:HMM:TIGR04119.1
COORDINATES: protein motif:HMM:TIGR04115.1
radical SAM peptide maturase, CXXX-repeat target family
COORDINATES: protein motif:HMM:TIGR04117.1
COORDINATES: protein motif:HMM:NF016260.2
translocation/assembly module TamB domain-containing protein
COORDINATES: protein motif:HMM:NF013283.2
autotransporter assembly complex protein TamA
COORDINATES: protein motif:HMM:NF006186.0
GO:0008935 - 1,4-dihydroxy-2-naphthoyl-CoA synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00173.1
GO:0070204 - 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1- carboxylic-acid synthase activity [Evidence IEA]
2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase
COORDINATES: protein motif:HMM:TIGR00543.1
GO:0008909 - isochorismate synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003103909.1
COORDINATES: protein motif:HMM:NF014703.2
COORDINATES: protein motif:HMM:NF016274.2
COORDINATES: protein motif:HMM:NF013068.2
COORDINATES: similar to AA sequence:RefSeq:WP_011417399.1
COORDINATES: protein motif:HMM:TIGR01334.1
COORDINATES: similar to AA sequence:RefSeq:WP_011416065.1
COORDINATES: protein motif:HMM:TIGR04282.1
TIGR04282 family arsenosugar biosynthesis glycosyltransferase
COORDINATES: protein motif:HMM:TIGR04283.1
TIGR04283 family arsenosugar biosynthesis glycosyltransferase
COORDINATES: protein motif:HMM:NF018942.2
COORDINATES: protein motif:HMM:NF040466.1
COORDINATES: protein motif:HMM:NF023251.2
COORDINATES: protein motif:HMM:NF040157.1
COORDINATES: protein motif:HMM:NF013986.2
COORDINATES: similar to AA sequence:RefSeq:WP_014810830.1
double-cubane-cluster-containing anaerobic reductase
COORDINATES: protein motif:HMM:NF040772.1
COORDINATES: similar to AA sequence:RefSeq:WP_016291521.1
COORDINATES: protein motif:HMM:NF024772.2
COORDINATES: protein motif:HMM:NF020893.2
COORDINATES: protein motif:HMM:NF015651.2
lysylphosphatidylglycerol synthase transmembrane domain-containing protein
COORDINATES: protein motif:HMM:TIGR00498.1
GO:0006282 - regulation of DNA repair [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: protein motif:HMM:NF014560.2
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0050797 - thymidylate synthase (FAD) activity [Evidence IEA]
GO:0006231 - dTMP biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013706998.1
YeeE/YedE thiosulfate transporter family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008869933.1
COORDINATES: protein motif:HMM:NF006752.0
COORDINATES: protein motif:HMM:NF040864.1
COORDINATES: protein motif:HMM:NF040863.1
mercury methylation corrinoid protein HgcA
COORDINATES: protein motif:HMM:NF024986.2
COORDINATES: protein motif:HMM:NF015685.2
GO:0033856 - pyridoxine 5'-phosphate synthase activity [Evidence IEA]
GO:0008615 - pyridoxine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF033788.1
metalloregulator ArsR/SmtB family transcription factor
COORDINATES: protein motif:HMM:NF022321.2
COORDINATES: protein motif:HMM:NF015715.2
COORDINATES: protein motif:HMM:NF013231.2
COORDINATES: similar to AA sequence:RefSeq:WP_003744449.1
GO:0008490 - arsenite secondary active transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013705087.1
COORDINATES: protein motif:HMM:NF024809.2
GO:0006749 - glutathione metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024853.2
COORDINATES: similar to AA sequence:RefSeq:WP_014809902.1
COORDINATES: protein motif:HMM:NF019348.2
COORDINATES: protein motif:HMM:NF017569.2
COORDINATES: protein motif:HMM:NF024917.2
COORDINATES: protein motif:HMM:NF013696.2
COORDINATES: protein motif:HMM:NF024805.2
COORDINATES: protein motif:HMM:NF015444.2
COORDINATES: protein motif:HMM:NF014910.2
COORDINATES: similar to AA sequence:RefSeq:WP_014812459.1
COORDINATES: similar to AA sequence:RefSeq:WP_011418857.1
GO:0046523 - S-methyl-5-thioribose-1-phosphate isomerase activity [Evidence IEA]
GO:0019509 - L-methionine salvage from methylthioadenosine [Evidence IEA]
S-methyl-5-thioribose-1-phosphate isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_011418858.1
COORDINATES: similar to AA sequence:RefSeq:WP_011418859.1
GO:0030956 - glutamyl-tRNA(Gln) amidotransferase complex [Evidence IEA]
GO:0050567 - glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity [Evidence IEA]
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA
COORDINATES: similar to AA sequence:RefSeq:WP_011418860.1
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC
COORDINATES: protein motif:HMM:TIGR01410.1
GO:0015628 - protein secretion by the type II secretion system [Evidence IEA]; GO:0015031 - protein transport [Evidence IEA]
Sec-independent protein translocase protein TatB
COORDINATES: protein motif:HMM:TIGR00945.1
COORDINATES: protein motif:HMM:TIGR00118.1
GO:0005948 - acetolactate synthase complex [Evidence IEA]
GO:0003984 - acetolactate synthase activity [Evidence IEA]
GO:0009097 - isoleucine biosynthetic process [Evidence IEA]; GO:0009099 - valine biosynthetic process [Evidence IEA]
biosynthetic-type acetolactate synthase large subunit
COORDINATES: protein motif:HMM:NF008864.0
GO:1990610 - acetolactate synthase regulator activity [Evidence IEA]
GO:0009082 - branched-chain amino acid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014807960.1
COORDINATES: protein motif:HMM:TIGR00119.1
COORDINATES: protein motif:HMM:TIGR00465.1
GO:0004455 - ketol-acid reductoisomerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011418871.1
GO:0004160 - dihydroxy-acid dehydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011416278.1
COORDINATES: similar to AA sequence:RefSeq:WP_014810269.1
endonuclease III domain-containing protein
COORDINATES: protein motif:HMM:NF012901.2
COORDINATES: protein motif:HMM:NF003509.0
GO:0008693 - 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity [Evidence IEA]
bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase
COORDINATES: protein motif:HMM:NF024950.2
COORDINATES: protein motif:HMM:NF013702.2
COORDINATES: protein motif:HMM:NF013786.2
4'-phosphopantetheinyl transferase superfamily protein
COORDINATES: protein motif:HMM:NF014460.2
COORDINATES: similar to AA sequence:RefSeq:WP_011418891.1
GO:0042823 - pyridoxal phosphate biosynthetic process [Evidence IEA]
pyridoxal 5'-phosphate synthase glutaminase subunit PdxT
COORDINATES: similar to AA sequence:RefSeq:WP_011418892.1
pyridoxal 5'-phosphate synthase lyase subunit PdxS
COORDINATES: similar to AA sequence:RefSeq:WP_013705296.1
COORDINATES: similar to AA sequence:RefSeq:WP_013705295.1
GO:0016884 - carbon-nitrogen ligase activity, with glutamine as amido-N-donor [Evidence IEA]; GO:0000107 - imidazoleglycerol-phosphate synthase activity [Evidence IEA]
imidazole glycerol phosphate synthase subunit HisH
COORDINATES: protein motif:HMM:NF013920.2
Zn-ribbon domain-containing OB-fold protein
COORDINATES: similar to AA sequence:RefSeq:WP_014810276.1
COORDINATES: similar to AA sequence:RefSeq:WP_014810900.1
COORDINATES: similar to AA sequence:RefSeq:WP_011417019.1
COORDINATES: protein motif:HMM:NF014671.2
cyclopropane-fatty-acyl-phospholipid synthase family protein
COORDINATES: protein motif:HMM:NF019846.2
COORDINATES: protein motif:HMM:NF012602.2
COORDINATES: protein motif:HMM:NF016160.2
SoxR reducing system RseC family protein
COORDINATES: protein motif:HMM:NF014477.2
COORDINATES: similar to AA sequence:RefSeq:WP_013707006.1
COORDINATES: similar to AA sequence:RefSeq:WP_014810708.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0009055 - electron transfer activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014810709.1
RnfABCDGE type electron transport complex subunit D
COORDINATES: protein motif:HMM:NF016121.2
COORDINATES: protein motif:HMM:NF009070.0
COORDINATES: protein motif:HMM:NF014557.2
COORDINATES: similar to AA sequence:RefSeq:WP_011416054.1
COORDINATES: similar to AA sequence:RefSeq:WP_014810856.1
GO:0019439 - aromatic compound catabolic process [Evidence IEA]
6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_014810083.1
6-oxocyclohex-1-ene-1-carbonyl-CoA hydratase
enoyl-CoA hydratase/isomerase family protein
COORDINATES: protein motif:HMM:TIGR01212.1
This family includes YhcC from E. coli K-12, an uncharacterized radical SAM protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_014810442.1
GO:0008033 - tRNA processing [Evidence IEA]; GO:0002098 - tRNA wobble uridine modification [Evidence IEA]
tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG
COORDINATES: similar to AA sequence:RefSeq:WP_011418746.1
COORDINATES: similar to AA sequence:RefSeq:WP_011418747.1
COORDINATES: similar to AA sequence:RefSeq:WP_011416052.1
COORDINATES: similar to AA sequence:RefSeq:WP_011416388.1
COORDINATES: similar to AA sequence:RefSeq:WP_011417297.1
COORDINATES: similar to AA sequence:RefSeq:WP_011418410.1
COORDINATES: similar to AA sequence:RefSeq:WP_014812628.1
COORDINATES: similar to AA sequence:RefSeq:WP_014811378.1
COORDINATES: similar to AA sequence:RefSeq:WP_013706018.1
COORDINATES: similar to AA sequence:RefSeq:WP_014809080.1
GO:0005951 - carbamoyl-phosphate synthase complex [Evidence IEA]
GO:0004088 - carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity [Evidence IEA]
glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
COORDINATES: similar to AA sequence:RefSeq:WP_014808440.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003922 - GMP synthase (glutamine-hydrolyzing) activity [Evidence IEA]; GO:0016462 - pyrophosphatase activity [Evidence IEA]
GO:0006177 - GMP biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013706026.1
COORDINATES: similar to AA sequence:RefSeq:WP_013705518.1
GO:0004044 - amidophosphoribosyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012348.2
GO:0004356 - glutamate-ammonia ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013188.2
COORDINATES: protein motif:HMM:NF016763.2
COORDINATES: protein motif:HMM:TIGR02093.1
COORDINATES: similar to AA sequence:RefSeq:WP_011418323.1
COORDINATES: protein motif:HMM:NF013767.2
COORDINATES: similar to AA sequence:RefSeq:WP_011418975.1
GO:0008881 - glutamate racemase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013347.2
COORDINATES: similar to AA sequence:RefSeq:WP_014810045.1
COORDINATES: similar to AA sequence:RefSeq:WP_014810048.1
COORDINATES: similar to AA sequence:RefSeq:WP_014810049.1
iron ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_011418985.1
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0004076 - biotin synthase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF014669.2
COORDINATES: similar to AA sequence:RefSeq:WP_011418988.1
GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
energy-coupling factor transporter ATPase
COORDINATES: protein motif:HMM:NF014420.2
energy-coupling factor transporter transmembrane component T
COORDINATES: protein motif:HMM:NF013740.2
COORDINATES: similar to AA sequence:RefSeq:WP_011416947.1
COORDINATES: protein motif:HMM:TIGR00577.1
GO:0008534 - oxidized purine nucleobase lesion DNA N-glycosylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015900294.1
COORDINATES: protein motif:HMM:NF008865.0
GO:0004664 - prephenate dehydratase activity [Evidence IEA]
GO:0009094 - L-phenylalanine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF006421.0
COORDINATES: protein motif:HMM:NF016611.2
COORDINATES: protein motif:HMM:NF024919.2
COORDINATES: protein motif:HMM:NF033919.1
COORDINATES: protein motif:HMM:NF012456.2
GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011419009.1
COORDINATES: protein motif:HMM:TIGR03321.1
COORDINATES: similar to AA sequence:RefSeq:WP_213059412.1
COORDINATES: similar to AA sequence:RefSeq:WP_015226544.1
GO:0045263 - proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]
COORDINATES: protein motif:HMM:NF024368.2
COORDINATES: protein motif:HMM:TIGR02230.1
COORDINATES: protein motif:HMM:NF004871.0
COORDINATES: similar to AA sequence:RefSeq:WP_014811478.1
COORDINATES: protein motif:HMM:NF013180.2
COORDINATES: protein motif:HMM:NF012314.2
COORDINATES: protein motif:HMM:TIGR01084.1
GO:0004844 - uracil DNA N-glycosylase activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: protein motif:HMM:NF025252.2
COORDINATES: protein motif:HMM:NF006821.0
COORDINATES: protein motif:HMM:NF013106.2
transglycosylase domain-containing protein
COORDINATES: protein motif:HMM:NF013665.2
COORDINATES: protein motif:HMM:TIGR00230.1
GO:0000023 - maltose metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF027619.2
COORDINATES: similar to AA sequence:RefSeq:WP_013706493.1
COORDINATES: similar to AA sequence:RefSeq:WP_025635254.1
COORDINATES: similar to AA sequence:RefSeq:WP_003084633.1
COORDINATES: similar to AA sequence:RefSeq:WP_013707301.1
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013707302.1
COORDINATES: protein motif:HMM:NF015823.2
COORDINATES: similar to AA sequence:RefSeq:WP_003050054.1
COORDINATES: similar to AA sequence:RefSeq:WP_003050052.1
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]; GO:0016021 - integral component of membrane [Evidence IEA]
ribosome-associated ATPase/putative transporter RbbA
COORDINATES: similar to AA sequence:RefSeq:WP_003050050.1
COORDINATES: protein motif:HMM:NF021497.2
COORDINATES: protein motif:HMM:NF023583.2
type I restriction-modification system subunit M N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF024211.2
COORDINATES: similar to AA sequence:RefSeq:WP_011419057.1
GO:0008690 - 3-deoxy-manno-octulosonate cytidylyltransferase activity [Evidence IEA]
GO:0009244 - lipopolysaccharide core region biosynthetic process [Evidence IEA]
3-deoxy-manno-octulosonate cytidylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_014810734.1
COORDINATES: protein motif:HMM:TIGR00050.1
COORDINATES: protein motif:HMM:TIGR00138.1
GO:0046118 - 7-methylguanosine biosynthetic process [Evidence IEA]; GO:0031167 - rRNA methylation [Evidence IEA]
16S rRNA (guanine(527)-N(7))-methyltransferase RsmG
COORDINATES: similar to AA sequence:RefSeq:WP_012096464.1