Escherichia fergusonii strain FDAARGOS_1499 plasmid unnamed, complete sequence.
type: Entry
definition: Escherichia fergusonii strain FDAARGOS_1499 plasmid unnamed, complete sequence.
sequence version: NZ_CP083639.1
sequence date: 2022-10-16
sequence: sequence
division: CON
label: NZ_CP083639.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN21218855
keyword: RefSeq
source: Escherichia fergusonii
organism: Escherichia fergusonii
taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP083639.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: SMRT v. 9.0.0, HGAP v. 4.0\nGenome Coverage :: 1460.71x\nSequencing Technology :: Pacbio; Illumina\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 10/16/2022 04:44:57\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.3\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;\n repeat_region\nGenes (total) :: 4,456\nCDSs (total) :: 4,341\nGenes (coding) :: 4,269\nCDSs (with protein) :: 4,269\nGenes (RNA) :: 115\nrRNAs :: 8, 7, 7 (5S, 16S, 23S)\ncomplete rRNAs :: 8, 7, 7 (5S, 16S, 23S)\ntRNAs :: 86\nncRNAs :: 7\nPseudo Genes (total) :: 72\nCDSs (without protein) :: 72\nPseudo Genes (ambiguous residues) :: 0 of 72\nPseudo Genes (frameshifted) :: 26 of 72\nPseudo Genes (incomplete) :: 47 of 72\nPseudo Genes (internal stop) :: 16 of 72\nPseudo Genes (multiple problems) :: 13 of 72\nCRISPR Arrays :: 2\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 57214
topology: circular
so has quality: SO_0000988
location: 1..57214
location: region:1-57214:1
RO_0002162: 564

NZ_CP083639
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN21218855
type: BioSample
SIO_000068: biosample

1
title: FDA dAtabase for Regulatory Grade micrObial Sequences (FDA-ARGOS): Supporting development and validation of Infectious Disease Dx tests
author: Sproer, C.
author: Gronow, S.
author: Severitt, S.
author: Schroder, I.
author: Tallon, L.
author: Sadzewicz, L.
author: Zhao, X.
author: Boylan, J.
author: Ott, S.
author: Bowen, H.
author: Vavikolanu, K.
author: Hazen, T.
author: Aluvathingal, J.
author: Nadendla, S.
author: Lowell, S.
author: Myers, T.
author: Yan, Y.
journal: Unpublished

2
title: Direct Submission
author: Sproer, C.
author: Gronow, S.
author: Severitt, S.
author: Schroder, I.
author: Tallon, L.
author: Sadzewicz, L.
author: Zhao, X.
author: Boylan, J.
author: Ott, S.
author: Bowen, H.
author: Vavikolanu, K.
author: Hazen, T.
author: Aluvathingal, J.
author: Nadendla, S.
author: Lowell, S.
author: Myers, T.
author: Yan, Y.
journal: Submitted (15-SEP-2021) Center for Devices and Radiological Health, US Food and Drug Administration, 10903 New Hampshire Avenue, White Oak, MD 20903, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:57214:1
position: 57214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-57214:1:source
so part of: sequence
organism: Escherichia fergusonii
mol type: genomic DNA
strain: FDAARGOS_1499
culture collection: DSM:13698
type material: type strain of Escherichia fergusonii
plasmid: unnamed
country: Germany: Braunschweig
collected by: DSMZ

564
type: Taxonomy
SIO_000068: taxonomy

LA347_RS22060
type: Gene
subclass of: SO_0000704
RO_0002162: 564
locus tag: LA347_RS22060
old locus tag: LA347_22060
so part of: sequence
location: 243..1109
location: region:243-1109:1
so has part: feature:243-1109:1:exon
subclass of: SO_0000010

75060558
type: Gene
SIO_000068: ncbigene

position:243:1
position: 243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1109:1
position: 1109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:243-1109:1:exon

LA347_RS22060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 564
locus tag: LA347_RS22060
old locus tag: LA347_22060
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004118283.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication initiation protein
translation: MGKRSSSVLNYPLVDKVQIFPVDKYRDSLQFLFSLSLWVGKNLPIGIEMDTQALLPATKTFKKRASIKQSNELTEAAYYLPLQAKRVLWLCLMQAYFNDSQEDDSDVLPLFKISVSDYVKYFNVATSVASRDVKAGVNALGESTVTFYPKEGEFEEVKRPWLAEAGMKRGRGSWQIEFNYKVMPFLVGLTSQFTTYSLYDCGQLNSVRVIRLYESLCQFRSTGVWITTHDWLCERFMLPASQKNNIAEMKRTFLEPALKKINEKTPLKVTYTTEEDGRLLFNFLDKKQ
SIO_010081: LA347_RS22060
subclass of: SO_0000673
so part of: LA347_RS22060
location: 243..1109
location: region:243-1109:1
so has part: feature:243-1109:1:exon

WP_004118283.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:243-1109:1:exon

LA347_RS22065
type: Gene
subclass of: SO_0000704
RO_0002162: 564
locus tag: LA347_RS22065
old locus tag: LA347_22065
so part of: sequence
location: complement(1430..1627)
location: region:1430-1627:-1
so has part: feature:1430-1627:-1:exon
subclass of: SO_0000010

75060559
type: Gene
SIO_000068: ncbigene

position:1430:-1
position: 1430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1627:-1
position: 1627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1430-1627:-1:exon

LA347_RS22065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 564
locus tag: LA347_RS22065
old locus tag: LA347_22065
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDAPDYGKQVNFADGPDYGKQVNFTGGRECGEQVNFADGPDYGKQVNFAGGRDCGKQVNFADGPD
SIO_010081: LA347_RS22065
subclass of: SO_0000673
so part of: LA347_RS22065
location: complement(1430..1627)
location: region:1430-1627:-1
so has part: feature:1430-1627:-1:exon

WP_000339856.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1430-1627:-1:exon

LA347_RS22070
type: Gene
subclass of: SO_0000704
RO_0002162: 564
locus tag: LA347_RS22070
old locus tag: LA347_22070
so part of: sequence
location: 2042..3247
location: region:2042-3247:1
so has part: feature:2042-3247:1:exon
subclass of: SO_0000010

75060560
type: Gene
SIO_000068: ncbigene

position:2042:1
position: 2042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3247:1
position: 3247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2042-3247:1:exon

LA347_RS22070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 564
locus tag: LA347_RS22070
old locus tag: LA347_22070
inference: COORDINATES: similar to AA sequence:RefSeq:YP_005229775.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MDNIEQLRKVATRAGKLLTSLSESIRQQKEELKLTEFYQEYSKAALYKLPKLSKGSVEYAVSEMEAGGYIFKKKPSGNTMKYAMTIQNVIDLYNHRKVPKYRDRFDKAFTIFVCNLKGGGSKTVSTASLSHAFRAHPQLLFEDLRILAIDFDPQASLTMFLSHENSVGLVENTAAQAMLQNVSREELLSDFIVPSIIPGVDVIPASIDDAFLAEGWKGLCEEHLPGKNIHAVLKENIIDKLQHDYDFIFLDSGPHLDAFLKNCIGAADLMLTPLPPATVDFHSSLKFVASLPALIDSIEMDGHTCNLIGNVGFMSKILNKSDHKICHSQAKEVFGADMLDMVLPRLDGFERCGETFDTVISANPATYDGSTEALKSAKSAAEDFAKAVFDRIEFIRTNGGM
SIO_010081: LA347_RS22070
subclass of: SO_0000673
so part of: LA347_RS22070
location: 2042..3247
location: region:2042-3247:1
so has part: feature:2042-3247:1:exon

WP_000368714.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2042-3247:1:exon

LA347_RS22075
type: Gene
subclass of: SO_0000704
RO_0002162: 564
locus tag: LA347_RS22075
old locus tag: LA347_22075
so part of: sequence
location: 3247..4221
location: region:3247-4221:1
so has part: feature:3247-4221:1:exon
subclass of: SO_0000010

75060561
type: Gene
SIO_000068: ncbigene

position:4221:1
position: 4221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3247-4221:1:exon

LA347_RS22075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 564
locus tag: LA347_RS22075
old locus tag: LA347_22075
inference: COORDINATES: similar to AA sequence:RefSeq:YP_005229774.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParB/RepB/Spo0J family partition protein
translation: MSNEKRKTIGRQLNTQASMLEMADTGRSQVFTLKTGRKVTFRFVRVPASEVESKTFVNQENNGRDQLALTRESLKSIIQTIKFQQFFPCIGIKQSERIEILDGSRRRASAIFVRTGLDVMVTEEHLSADEARQLAKDIQTAKEHNLREIGLRLIALKESGFNQKEIAELEGLSQAKVTRALQAAAVPQDLISLFPVQSELSFSDYKLLLEVNEKLGEKGLTPEELIQSVSAQLDAILSDGERPEDEQKASILKLISQASQALIDPSPKEKSVVSPLWSFEEKDKFARKRVKGRTLTYEFSRMSKVIQDELDKAINEVLDRNLSQ
SIO_010081: LA347_RS22075
subclass of: SO_0000673
so part of: LA347_RS22075
location: 3247..4221
location: region:3247-4221:1
so has part: feature:3247-4221:1:exon

WP_000064120.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3247-4221:1:exon

LA347_RS22080
type: Gene
subclass of: SO_0000704
RO_0002162: 564
locus tag: LA347_RS22080
old locus tag: LA347_22080
so part of: sequence
location: complement(4303..5574)
location: region:4303-5574:-1
so has part: feature:4303-5574:-1:exon
subclass of: SO_0000010

75060562
type: Gene
SIO_000068: ncbigene

position:4303:-1
position: 4303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5574:-1
position: 5574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4303-5574:-1:exon

LA347_RS22080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 564
locus tag: LA347_RS22080
old locus tag: LA347_22080
inference: COORDINATES: similar to AA sequence:RefSeq:YP_005229773.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Y-family DNA polymerase
translation: MFALADVNSFYASCERVFRPDLKGKPIVVLSNNDGNVIARSAEAKPWIKMGTPWFQIKNERYPEKIYAFSSNYELYASISARVMNCLEELAPRVEQYSIDEMFLDLTSVEHCMGLEDFARQLRQQVYDCTRLTIGVGAGPTKTLAKSAQWASKEWKQFHGVLALTRGNPQRTRKLLSLQPVEEIWGVGNRIARKLNVLGIKTALDLALTNPAFIRKNFSVVLERTVRELNGESCLSLEEAPPTKQQIVCSRSFGVKITEYESLRQAICQHAERASEKLRKEHQYCRHISVFIKTSPFAIKEPYYGNVATEKLLTPTQDTRDIIAAATTALERIWRDGHRYAKAGVMLNDFTGSGVSQLQLFDERPPRPHSAELMRVLDGINNSGLGKVWFAGRGMAPEWQMKREMLSPAYTTRWSDIPAAKLA
SIO_010081: LA347_RS22080
subclass of: SO_0000673
so part of: LA347_RS22080
location: complement(4303..5574)
location: region:4303-5574:-1
so has part: feature:4303-5574:-1:exon

WP_000457558.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4303-5574:-1:exon

LA347_RS22085
type: Gene
subclass of: SO_0000704
RO_0002162: 564
gene: umuD
locus tag: LA347_RS22085
old locus tag: LA347_22085
so part of: sequence
location: complement(5574..6005)
location: region:5574-6005:-1
so has part: feature:5574-6005:-1:exon
subclass of: SO_0000010

75060563
type: Gene
SIO_000068: ncbigene

position:6005:-1
position: 6005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5574-6005:-1:exon

LA347_RS22085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 564
gene: umuD
locus tag: LA347_RS22085
old locus tag: LA347_22085
EC number: 2.7.7.7
inference: COORDINATES: similar to AA sequence:RefSeq:YP_005229772.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: translesion error-prone DNA polymerase V autoproteolytic subunit
translation: MKLQLFSTGKELPPQAHPLFADLASCGFPSPAADYVESDLDLHDYCIRHPSATYYLRASGDSMADGSLYNGDLLVVDSAEKPRHGDIVVASMQGEFTVKRLLLTPRLTLQPMNASWSPIYPDPDELDIFGVVTHIIHRPREMY
SIO_010081: LA347_RS22085
subclass of: SO_0000673
so part of: LA347_RS22085
location: complement(5574..6005)
location: region:5574-6005:-1
so has part: feature:5574-6005:-1:exon

WP_000776034.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5574-6005:-1:exon

LA347_RS22090
type: Gene
subclass of: SO_0000704
RO_0002162: 564
locus tag: LA347_RS22090
old locus tag: LA347_22090
pseudo: true
so part of: sequence
location: <6302..7102
location: region:6302-7102:1
so has part: feature:6302-7102:1:exon
subclass of: SO_0000010

75060564
type: Gene
SIO_000068: ncbigene

position:6302:1
position: 6302
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:7102:1
position: 7102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6302-7102:1:exon

LA347_RS22090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 564
locus tag: LA347_RS22090
old locus tag: LA347_22090
inference: COORDINATES: similar to AA sequence:RefSeq:YP_005226014.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: reverse transcriptase domain-containing protein
SIO_010081: LA347_RS22090
subclass of: SO_0000673
so part of: LA347_RS22090
location: <6302..7102
location: region:6302-7102:1
so has part: feature:6302-7102:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6302-7102:1:exon

LA347_RS22095
type: Gene
subclass of: SO_0000704
RO_0002162: 564
locus tag: LA347_RS22095
old locus tag: LA347_22095
so part of: sequence
location: 7254..7951
location: region:7254-7951:1
so has part: feature:7254-7951:1:exon
subclass of: SO_0000010

75060565
type: Gene
SIO_000068: ncbigene

position:7254:1
position: 7254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7951:1
position: 7951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7254-7951:1:exon

LA347_RS22095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 564
locus tag: LA347_RS22095
old locus tag: LA347_22095
inference: COORDINATES: similar to AA sequence:RefSeq:WP_086558268.1
ribosomal slippage: true
note: programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS1-like element IS1X3 family transposase
translation: MASISISCPSCSATEGVVRNGKSTAGHQRYLCSHCRKTWQLQFTYTASQPGTHQKIIDMAMNGVGCRATARIMGVGLNTILRHFKKLRPQSVTSRIQPGSDVIVCAEMDEQWGYVGAKSRQRWLFYAYGRMCRTVVARVFGERTLATLERLPGLLSAFEVVVWMTDGWPLYESRLKGELHVISKRYTQRIERHNQNLRQHLARLGRKSLSFSKSVALHDKVIGHYLNIKHYQ
SIO_010081: LA347_RS22095
subclass of: SO_0000673
so part of: LA347_RS22095
location: join(7254..7503,7503..7951)
location: region:7254-7951:1
so has part: feature:7254-7503:1:exon
so has part: feature:7503-7951:1:exon

WP_223229472.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7254-7503:1:exon

position:7503:1
position: 7503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7503-7951:1:exon

LA347_RS22100
type: Gene
subclass of: SO_0000704
RO_0002162: 564
locus tag: LA347_RS22100
old locus tag: LA347_22100
pseudo: true
so part of: sequence
location: <7961..8269
location: region:7961-8269:1
so has part: feature:7961-8269:1:exon
subclass of: SO_0000010

75060566
type: Gene
SIO_000068: ncbigene

position:7961:1
position: 7961
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:8269:1
position: 8269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7961-8269:1:exon

LA347_RS22100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 564
locus tag: LA347_RS22100
old locus tag: LA347_22100
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012561120.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: replication initiation protein
SIO_010081: LA347_RS22100
subclass of: SO_0000673
so part of: LA347_RS22100
location: <7961..8269
location: region:7961-8269:1
so has part: feature:7961-8269:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7961-8269:1:exon

LA347_RS22105
type: Gene
subclass of: SO_0000704
RO_0002162: 564
locus tag: LA347_RS22105
old locus tag: LA347_22105
so part of: sequence
location: 9413..10381
location: region:9413-10381:1
so has part: feature:9413-10381:1:exon
subclass of: SO_0000010

75060567
type: Gene
SIO_000068: ncbigene

position:9413:1
position: 9413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10381:1
position: 10381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9413-10381:1:exon

LA347_RS22105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 564
locus tag: LA347_RS22105
old locus tag: LA347_22105
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS5 family transposase
translation: MKDQITHLPDNADRSVAKQKFKITNWPTYNKALINRGSITFWLDDEAIQAWYESATPSSRGRPQRYSDLAITTVLVIKRVFRLTLRAAQGFIDSIFTLMNVPLRCPDYTSVSKRAKSVNVSFKTFTRGEIAHLVIDSTGLKVFGEGEWKVKKHGQERRRIWRKLHLAVDSNTHEIICANLSLNNVTDSEAFPGLIRQTHRKIRAASADGAYDTQLCHDELRRKKISALIPPRKGAGYWPGEYADRNRAVANQRLTGSNARWKWTTDYNRRSIAETAMYRVKQLFGGSLTLRDYDGQVAEAMALVRALNKMTKAGMPESVRIA
SIO_010081: LA347_RS22105
subclass of: SO_0000673
so part of: LA347_RS22105
location: 9413..10381
location: region:9413-10381:1
so has part: feature:9413-10381:1:exon

WP_020956880.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9413-10381:1:exon

LA347_RS22110
type: Gene
subclass of: SO_0000704
RO_0002162: 564
locus tag: LA347_RS22110
old locus tag: LA347_22110
so part of: sequence
location: complement(10521..10907)
location: region:10521-10907:-1
so has part: feature:10521-10907:-1:exon
subclass of: SO_0000010

75060568
type: Gene
SIO_000068: ncbigene

position:10521:-1
position: 10521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10907:-1
position: 10907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10521-10907:-1:exon

LA347_RS22110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 564
locus tag: LA347_RS22110
old locus tag: LA347_22110
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006796897.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid stabilization protein StbA
translation: MNKPADLKPRNLSAAVRLRLNEIENWLDRGLTRHEIAEILDSEYSFSVTAKGLEMALYRTRQNRKNVLHNTHDKSSAKGAAESVLHNTQPSEPEVQESKKAESPGIIDKEFFKKIGENFDPKKFNKKF
SIO_010081: LA347_RS22110
subclass of: SO_0000673
so part of: LA347_RS22110
location: complement(10521..10907)
location: region:10521-10907:-1
so has part: feature:10521-10907:-1:exon

WP_001039464.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10521-10907:-1:exon

LA347_RS22115
type: Gene
subclass of: SO_0000704
RO_0002162: 564
locus tag: LA347_RS22115
old locus tag: LA347_22115
so part of: sequence
location: 11477..12445
location: region:11477-12445:1
so has part: feature:11477-12445:1:exon
subclass of: SO_0000010

75060569
type: Gene
SIO_000068: ncbigene

position:11477:1
position: 11477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12445:1
position: 12445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11477-12445:1:exon

LA347_RS22115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 564
locus tag: LA347_RS22115
old locus tag: LA347_22115
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611102.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS5-like element IS903B family transposase
translation: MKDQITHLPDNADRSVAKQKFKITNWPTYNKALINRGSITFWLDDEAIQAWYESATPSSRGRPQRYSDLAITTVLVIKRVFRLTLRAAQGFIDSIFSLMNVPLRCPDYSCVSRRAKSVNISFKTPTRGEIAHLVIDSTGLKVFGEGEWKVKKHGQERRRIWRKLHLAVDSNTHEIICADLSLNNVTDSEAFPGLIRQTHRKIRAASADGAYDTRLCHDELRRKKISALIPPRKGAGYWPGEYADRNRAVANQRMTGSNARWKWTTDYNRRSIAETAMYRVKQLFGGSLTLRDYDGQVAEAMALVRALNKMTKAGMPESVRIA
SIO_010081: LA347_RS22115
subclass of: SO_0000673
so part of: LA347_RS22115
location: 11477..12445
location: region:11477-12445:1
so has part: feature:11477-12445:1:exon

WP_000654802.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11477-12445:1:exon

LA347_RS22120
type: Gene
subclass of: SO_0000704
RO_0002162: 564
locus tag: LA347_RS22120
old locus tag: LA347_22120
pseudo: true
so part of: sequence
location: complement(<12503..12586)
location: region:12503-12586:-1
so has part: feature:12503-12586:-1:exon
subclass of: SO_0000010

75060570
type: Gene
SIO_000068: ncbigene

position:12503:-1
position: 12503
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:12586:-1
position: 12586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12503-12586:-1:exon

LA347_RS22120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 564
locus tag: LA347_RS22120
old locus tag: LA347_22120
inference: COORDINATES: similar to AA sequence:RefSeq:NP_460027.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: SOS response-associated peptidase
SIO_010081: LA347_RS22120
subclass of: SO_0000673
so part of: LA347_RS22120
location: complement(<12503..12586)
location: region:12503-12586:-1
so has part: feature:12503-12586:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12503-12586:-1:exon

LA347_RS22125
type: Gene
subclass of: SO_0000704
RO_0002162: 564
locus tag: LA347_RS22125
old locus tag: LA347_22125
pseudo: true
so part of: sequence
location: <13307..13918
location: region:13307-13918:1
so has part: feature:13307-13918:1:exon
subclass of: SO_0000010

75060571
type: Gene
SIO_000068: ncbigene

position:13307:1
position: 13307
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:13918:1
position: 13918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13307-13918:1:exon

LA347_RS22125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 564
locus tag: LA347_RS22125
old locus tag: LA347_22125
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611476.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS3 family transposase
SIO_010081: LA347_RS22125
subclass of: SO_0000673
so part of: LA347_RS22125
location: <13307..13918
location: region:13307-13918:1
so has part: feature:13307-13918:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13307-13918:1:exon

LA347_RS22130
type: Gene
subclass of: SO_0000704
RO_0002162: 564
locus tag: LA347_RS22130
old locus tag: LA347_22130
so part of: sequence
location: complement(13950..14129)
location: region:13950-14129:-1
so has part: feature:13950-14129:-1:exon
subclass of: SO_0000010

75060572
type: Gene
SIO_000068: ncbigene

position:13950:-1
position: 13950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14129:-1
position: 14129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13950-14129:-1:exon

LA347_RS22130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 564
locus tag: LA347_RS22130
old locus tag: LA347_22130
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000103622.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSTHKNERRGNPPFQFRLDPELRELMEQAQQQDGDESLAAWIKRIIRKELQQRGIEPKG
SIO_010081: LA347_RS22130
subclass of: SO_0000673
so part of: LA347_RS22130
location: complement(13950..14129)
location: region:13950-14129:-1
so has part: feature:13950-14129:-1:exon

WP_012600012.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13950-14129:-1:exon

LA347_RS22135
type: Gene
subclass of: SO_0000704
RO_0002162: 564
locus tag: LA347_RS22135
old locus tag: LA347_22135
so part of: sequence
location: 14353..14670
location: region:14353-14670:1
so has part: feature:14353-14670:1:exon
subclass of: SO_0000010

75060573
type: Gene
SIO_000068: ncbigene

position:14353:1
position: 14353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14670:1
position: 14670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14353-14670:1:exon

LA347_RS22135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 564
locus tag: LA347_RS22135
old locus tag: LA347_22135
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000284109.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MYVKDTYIEYWGEIFVSARIIEFGITFERFLKDPWKHLMSCGQESAPDSIAEGMLPLLPAQAEVARRVRENELRQLAFQRELLSRPEKKHSNNIKPIFIANKTTC
SIO_010081: LA347_RS22135
subclass of: SO_0000673
so part of: LA347_RS22135
location: 14353..14670
location: region:14353-14670:1
so has part: feature:14353-14670:1:exon

WP_032156934.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14353-14670:1:exon

LA347_RS22140
type: Gene
subclass of: SO_0000704
RO_0002162: 564
locus tag: LA347_RS22140
old locus tag: LA347_22140
so part of: sequence
location: 14739..15665
location: region:14739-15665:1
so has part: feature:14739-15665:1:exon
subclass of: SO_0000010

75060574
type: Gene
SIO_000068: ncbigene

position:14739:1
position: 14739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15665:1
position: 15665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14739-15665:1:exon

LA347_RS22140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 564
locus tag: LA347_RS22140
old locus tag: LA347_22140
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000617209.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: WYL domain-containing protein
translation: MIRACPKWIERLTVQDNTGLEELSQAQRERLAHIDFTLLFKGEAGRSYLTERFSVAPSVATQDFARYKALAPNNVMYDEKRRVHLKTSTFQPLFDYDIVRTLATISQGFGDGFLGKVRPPMACEAPFHLNKPKLEVVAAISEAIHKRAVINIEYTSLSSGHGSRQIVPHTLIDNGLRWHVRAFDRKHREFRDFVLTRISEVELLEDKVNDEVETLQWDKQWNRIVELELIPHPKLAHPEAVLIDYAMENNRLRVEIRAAFAGYLLRLWNIDCSKNSKSNGREFHLALKNPEALYGVDNAALAPGYSES
SIO_010081: LA347_RS22140
subclass of: SO_0000673
so part of: LA347_RS22140
location: 14739..15665
location: region:14739-15665:1
so has part: feature:14739-15665:1:exon

WP_000617209.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14739-15665:1:exon

LA347_RS22145
type: Gene
subclass of: SO_0000704
RO_0002162: 564
locus tag: LA347_RS22145
old locus tag: LA347_22145
so part of: sequence
location: 15675..16274
location: region:15675-16274:1
so has part: feature:15675-16274:1:exon
subclass of: SO_0000010

75060575
type: Gene
SIO_000068: ncbigene

position:15675:1
position: 15675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16274:1
position: 16274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15675-16274:1:exon

LA347_RS22145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 564
locus tag: LA347_RS22145
old locus tag: LA347_22145
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001021938.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1819 family protein
translation: MNIKEYLGDLIGSSLLITESRIIAESLLKKLPEDEWKSLIVEQNVLQKKSGQTAIRYARTIRWRIEGLGDEFMTDLLAASERAYIQMLMMSLLIHSPVVADFMRHTLAEARRTYKPALTADAWSEFYDTRVRAYAELGGFSDSTIKKMGNNAIKALVDSGYLSDSRTKKIQPVYLMPEVKDWLVRLGREDLIEVMECTI
SIO_010081: LA347_RS22145
subclass of: SO_0000673
so part of: LA347_RS22145
location: 15675..16274
location: region:15675-16274:1
so has part: feature:15675-16274:1:exon

WP_001021938.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15675-16274:1:exon

LA347_RS22150
type: Gene
subclass of: SO_0000704
RO_0002162: 564
locus tag: LA347_RS22150
old locus tag: LA347_22150
so part of: sequence
location: 16271..16855
location: region:16271-16855:1
so has part: feature:16271-16855:1:exon
subclass of: SO_0000010

75060576
type: Gene
SIO_000068: ncbigene

position:16271:1
position: 16271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16855:1
position: 16855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16271-16855:1:exon

LA347_RS22150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 564
locus tag: LA347_RS22150
old locus tag: LA347_22150
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000645939.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF1788 domain-containing protein
translation: MKALQTRLDLIQERIESPKFLKNDGLGNEIGFWVFDYPAKYELLVREHLKHVDEKLNKRGYRFVHLNIFEVLIDMLEERGLFDRACQRELQVGVDGLRKTLAGPLSQEKVARYIADKYKPSELEFVLLSGLGSAWPLVRGHELLSALQDVMGSTPLVLFYPGEYSGRDLHPFGMIESKNYYRAFKLVPEDGKKN
SIO_010081: LA347_RS22150
subclass of: SO_0000673
so part of: LA347_RS22150
location: 16271..16855
location: region:16271-16855:1
so has part: feature:16271-16855:1:exon

WP_000645940.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16271-16855:1:exon

LA347_RS22155
type: Gene
subclass of: SO_0000704
RO_0002162: 564
gene: brxC
locus tag: LA347_RS22155
old locus tag: LA347_22155
so part of: sequence
location: 16874..20551
location: region:16874-20551:1
so has part: feature:16874-20551:1:exon
subclass of: SO_0000010

75060577
type: Gene
SIO_000068: ncbigene

position:16874:1
position: 16874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20551:1
position: 20551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16874-20551:1:exon

LA347_RS22155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 564
gene: brxC
locus tag: LA347_RS22155
old locus tag: LA347_22155
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000687848.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: BREX system P-loop protein BrxC
translation: MKIEQIFSKKLTRDINGVVKAEQKDNDSVYVELDEYVVTRELDRHFRAFFEAYVPSVEKSHGDMSGKIGVWISGFFGSGKSHFLKILSYLLENKSVEKDGQGRQAFEFFKDKINDAMLLADIQKAVTKDTDVILFNIDSRANTDDRENAILKVFLKVFNERVGYCADFPHIAHLERELDKRNQYASFKDKFAELTQSTWEKERDAYDFYRDELSEALAHASEQSLESAKAWVEQVENNFPLDIRNFCKWVNEYLDRTGDRNLLFLVDEVGQFIGKNTQMMLKLQTITEDLGTYCGGRAWVVVTSQADIDAAIGGMDKRDGEDFSKIQGRFSTRLQLSSSNTSEVIQKRLLSKTEEARTHLIDVFAEKGDILRNQLTFDKTTTASLKGYTDAPSFVDNYPFVPYHYTLVQKVFESIRTKGATGKHLAMGERSLLDAFQSAAKQMKDSGLDVLIPFYSFYAPIESFLEPAVKRTIDQACELDSLTEFDGKILKTLFLIRYVDVVKSTLDNLVTLSIDRIDADKIALRKQIEESLNRLERQLLIARNGDEFIFLTNEEKEIENEIRHTDVEMSEVSSKLSAIVFDGILKGNRAYRYPINKQDFAVSRFCNGHPKDGTTLEDLVIKVISPLDSHFENYAHDQACINHTLEADGCVLVKLGEHKRLWDELTTFIKTDRFLKQNSGQRPEQEHLLREKQMENMEREKRLRTDFEALFAEADVYAIGTKLPKKSATPSAIVEEAYKYVIENTFAKLNMLKATPGEVLRELQAVLVADDIAQIGRDLQADECNPEATREVEQYVTLKVERNEPVYLRDIVAHFGKRPYGWPDNEILLLTARLGLAGKLSFSTQGTDLALKKAYEPFTSVRKRGEIRVHKIRQHDERQIKKAAGLVKEIFSKTFTGSGEKELYELVRDELLAWNEKLKSFRTKSQTGHFPGKSQIDDGLALVAGILEQTSSFALITRFLEDADALEEFAEDFEDLDDFYNSQFQTWQALAGALNEKFKANRPALEKDSEALKALTELERIYNMPSPYEQLRHINPLIEQVAKVNSTLVEEKRTHALERVDLRIGRVKEALAEAHAPSELQNQALRPLQMCRQRIEETSSIPQIISEQTEAEGYEDEAYELLNGFIEDQRKKAEAEQRRRELEQQTREEEAAKAGKAAPAPEPASEPVQPQPVAKRTVTINSTDAMAKSVTTGFIESEAEVDAYLAALREQLIAAVKAGDRVRIK
SIO_010081: LA347_RS22155
subclass of: SO_0000673
so part of: LA347_RS22155
location: 16874..20551
location: region:16874-20551:1
so has part: feature:16874-20551:1:exon

WP_000687847.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16874-20551:1:exon

LA347_RS22160
type: Gene
subclass of: SO_0000704
RO_0002162: 564
locus tag: LA347_RS22160
old locus tag: LA347_22160
so part of: sequence
location: 20568..22331
location: region:20568-22331:1
so has part: feature:20568-22331:1:exon
subclass of: SO_0000010

75060578
type: Gene
SIO_000068: ncbigene

position:20568:1
position: 20568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22331:1
position: 22331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20568-22331:1:exon

LA347_RS22160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 564
locus tag: LA347_RS22160
old locus tag: LA347_22160
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010129446.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF262 domain-containing protein
translation: MYQAGGTIRSLLDKVAEQEYLLPAIQREFVWRPEQICRLFDSLLQGYPFGTFLFWKIKPENRDSYQFYQFMQHYHERDNYHCENVTQLPEREFIAVLDGQQRITALNIGLRGSFAWKLTGKWWSNDDAFPVRRLHLNLLSKPDLETGSMYDFEFLTDDKASLDASEQYWFRVGRIMEEEEDALIDEVADDARLSSEQRKEARSTLRHLYRTIHDKDKISFYEESDQSLERVLNIFIRMNSGGTTLSYSDLLLSIAVAQWSSLDAREEIHALVDEMNRVGDGFNVSKDLVLKAGLMLSDIGSVGFKVENFNKENMAILEKNWTPIRDALLLSMQLLASFGFNAQNLRATSAILPLAYYLHHRKLTASYLSRVEYAVDRECIRNWLIRSLLKASGIWGSGLDTLLTMLRSDIKQSGDTGFPLAKIEATMQQRGKSLRFDPEEISELAQLDYGNPRTFALLTLLFPGFDFSRHFHVDHIYPKGLFTRNKLAKVGVPAEQLDELIEASNKLPNLQLLEGTINNQKRQKMPHEWYAQQWPDVNARQAHLQSQAITSLPEQLNQFMDFYRERQETLLARIRTALQPASSVETE
SIO_010081: LA347_RS22160
subclass of: SO_0000673
so part of: LA347_RS22160
location: 20568..22331
location: region:20568-22331:1
so has part: feature:20568-22331:1:exon

WP_000283751.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20568-22331:1:exon

LA347_RS22165
type: Gene
subclass of: SO_0000704
RO_0002162: 564
gene: pglX
locus tag: LA347_RS22165
old locus tag: LA347_22165
so part of: sequence
location: 22347..26000
location: region:22347-26000:1
so has part: feature:22347-26000:1:exon
subclass of: SO_0000010

75060579
type: Gene
SIO_000068: ncbigene

position:22347:1
position: 22347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26000:1
position: 26000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22347-26000:1:exon

LA347_RS22165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 564
gene: pglX
locus tag: LA347_RS22165
old locus tag: LA347_22165
EC number: 2.1.1.72
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001095580.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0008170 - N-methyltransferase activity [Evidence IEA]
GO process: GO:0006306 - DNA methylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: BREX-1 system adenine-specific DNA-methyltransferase PglX
translation: MNTNNMKKYAPKARREFMDAVAKRLNTFGITANKKGELQIAEANLQGSVLQIAGNSFDGKLAEPRKRIVARSQKLGYAQLIEQVAYTWFNRLCAIRYMEIHDYLGHGFRVLSHPDNPKGFEIIDHAQDAADELGLDRARIVELKLAGNKDEELYRELLLGQCHKLHEAMPFLFDALDDETELLLPDNLTRTDSILRGLVDGIPEEDWQQVEVIGWLYQFYISEKKDQVMGKVVKSEDIPAATQLFTPNWIVKYLVQNSVGRQWLQTYPDSAIKTQMEYYIEPAEQSDEVNQQLKAITPESIEPETIKVLDPACGSGHILIEAYNVLKAIYEERGFRSRDIPKMILENNLYGLDIDDRAAQLSGFALMMMARDDDKRIFTRNVRLNVLSLQESNHLDLPTLWKALNLSGSWQSGTSQGLFSDDDQDLSSFNADNRYQLLKRTLARFTQAKTFGSLIDVPSDDHEQLKEILSTLVELQESGDSMQKPAAKQLIEFVHQALVLSIRYDAVIANPPYMGSKYQTAEVKMFLKDNFKGYEKDLFSAYIVRNLQLAKEHGQLGFMTPFVWMFISSYEQLRSTLIDDEIISTLIQLEYSGFDGATVPICTFTLTKGHIPEYIGSYIRLSDFKGAANQAPKTLQAIKNPECGWFYKAKSDDFKKIPGSPIAYWASSLQFSMFDSHPLLTSIANVAEGTTTGDVNRFLKMWHEIDVNGLGIGFDSRERAKDSGKKWFPYNKGGEYRKWFGNNDYVVNWAEDGKELRQYQGSFLRGEKFYFKAGLTWSKVSSGILSFRLFDEGFLFDTGGLCAFSDNIEYIAAILNSKVSLDIMSILAPTLNFTVGTVSSLPIVEGIPRLTENANRLKRLSKSDWDSYETSWDFTKHPLLSHTSLLIKDSYSRLLLENSQSLKEYREIEEYNNKVIAEAYGITSDALTIADHEITLFSSFGYRYGPDRAVNGEFLYRSDVVAELISYSIGAMLGRYSIDSKGVVYAHTANEGFEQLVAEGAYKTFPADEDGIIPLTDQEWFKDDATNRFREFVQVVWGDDHLQENLDFVAESLCLNAIKPKKSESALETIRRYLSTQFYKDHLKTYKKRPIYWLFSSGKQKAFECLVYLHRYNEGTLSRMRTEYVTPLLGKYDAYAEQLEKQIETADSTSEANRFKKELDALIKKQVELREFDDKLKHYADMRISLDLDDGVKVNYGKFGDLLADVKAITGSAPEVN
SIO_010081: LA347_RS22165
subclass of: SO_0000673
so part of: LA347_RS22165
location: 22347..26000
location: region:22347-26000:1
so has part: feature:22347-26000:1:exon

WP_001095615.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22347-26000:1:exon

LA347_RS22170
type: Gene
subclass of: SO_0000704
RO_0002162: 564
gene: pglZ
locus tag: LA347_RS22170
old locus tag: LA347_22170
so part of: sequence
location: 26000..28657
location: region:26000-28657:1
so has part: feature:26000-28657:1:exon
subclass of: SO_0000010

75060580
type: Gene
SIO_000068: ncbigene

position:28657:1
position: 28657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26000-28657:1:exon

LA347_RS22170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 564
gene: pglZ
locus tag: LA347_RS22170
old locus tag: LA347_22170
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001167231.1
GO function: GO:0003824 - catalytic activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: BREX-1 system phosphatase PglZ type A
translation: MQISELAQGVAAKLEQSRIVFWYDPEQSFTEELEHLANALSIAKEVGDSAADITARVLPNDLTILNMGNESVLAVKKRIEVDEREAKFLIYFPSAEPEPDRDWLLDVRLYSEQFFADHSSMLLNELGIPKMALRTHIRKRQSFFANKQRIAGLKKWVTENEDELSLDRKMMAVVVKADSASLSDILLGLLREYAAYIEDESLGQPLWSQLGKFDLETSLWAYLSEGFGYTVEEPTFPDFVLKLFCTEFWSQIEGVERDWLLNNVLKSASGRATALAFMVSWRDSRSFAAYYESISKVLSQQLEISTRAGQYHPVELIECETFEAVEQAIIRGLVRDLLDSSKALDRVQFDTVLSRRLASHWTLSRKEYFAIYEAIRNAEELMHLRNRYVDGFHFDNAKAMYDAYTTDIYRFDQAYRLFNEHVHSVLSKGADILRQLDDEVESIYTNWYLYELGLAWDRHLANEKLLEKWQISGVPHQYDFYEKEVRTRLSLKQTKRVFVIISDALRFEIANELGAIINNEKRFKAEVSTQLGVLPSYTQLGMAALLPHKALSYQPEQGTAVYVDGISSQGLDNRNAILQKVGGMAVSSKELMSWSNQEGRDKVRDVEVVYIYHDTIDAIGDKAATEEKTFEACRSAIEELKDLVGRVINRLNGSRVVITADHGFLFQQKALVAADKTSLKTKPAGAIEAKKRYIVGNNLPSDEACWKGSINDTAHGSSDTEFLLPKAAQRFHFVGGAKFVHGGAMLQEVCVPVLHARELQKEQAAKHEKQPVGVVAATQPIKLVNNIDKVRFIQTDPVGERFVARLLDVYIVDTQGNEVSSRETINFDSVSKVMDERTREARLKLIGSQFDRNAQYTLVLENAEMRTRYSQYAVTIDLAFQDDFF
SIO_010081: LA347_RS22170
subclass of: SO_0000673
so part of: LA347_RS22170
location: 26000..28657
location: region:26000-28657:1
so has part: feature:26000-28657:1:exon

WP_001167230.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26000-28657:1:exon

LA347_RS22175
type: Gene
subclass of: SO_0000704
RO_0002162: 564
gene: brxL
locus tag: LA347_RS22175
old locus tag: LA347_22175
so part of: sequence
location: 28674..30749
location: region:28674-30749:1
so has part: feature:28674-30749:1:exon
subclass of: SO_0000010

75060581
type: Gene
SIO_000068: ncbigene

position:28674:1
position: 28674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30749:1
position: 30749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28674-30749:1:exon

LA347_RS22175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 564
gene: brxL
locus tag: LA347_RS22175
old locus tag: LA347_22175
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000205526.1
GO component: GO:0005575 - cellular_component [Evidence IEA]
GO function: GO:0003674 - molecular_function [Evidence IEA]
GO process: GO:0008150 - biological_process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: protease Lon-related BREX system protein BrxL
translation: MTTDFSQDHKDEKNQMQSADLDALLNQYFKGRVVRKDLTKQLKEGANVPVYVLEYLLGMYCASDDDEVVMQGLDNVKKILAENYVRPDEAEKVKSLIRERGMFKIIDKVSVKLNQKKDVYEAALSNLGIKDALVPTKIVQDNEKLLTGGIWCIITVQYFFEEGQKTSPFSIMSLKPIQMPSMNMDEVFSTRRHFSTDQWMDVLLRSVGMEPTNLEHRVKWHLITRMIPFVENNYNVCELGPRGTGKSHVYKECSPNSLLVSGGQTTVANLFYNMSSRQVGLVGMWDVVAFDEVAGINFKDKDGVQIMKDYMASGSFARGRDSIEAKASMVFVGNINQSVETLVKTSHLLAPFPEAMIDTAFFDRFHSYIPGWEIPKMRPEFFTNSYGLITDYLAEYMREMRKRSFADAIDKFFKLGNNLNQRDVIAVRRTVSGLLKLLHPDAQYTKDDVRACLTYALETRRRVKEQLKKLGGMEFFDVHFSYIDNDSLEEFFVNVPEQGGSKLIPEGLPRAGVVHLVTQGSTGQLGLYRYETQMMAGSGKHSVSGLGSNTAAKEAVRVGFDYFKGNLNRISASAKFSDHEYHLHVVELHNTGPSTKSSLAALIAFCSILMNRPIQEQMVVLGEMTLGGVVNPVQDLAGSLQLAMDSGAKRILLPMASASDIPTVPAELFSKFQISFYADPVDAVFKALGVN
SIO_010081: LA347_RS22175
subclass of: SO_0000673
so part of: LA347_RS22175
location: 28674..30749
location: region:28674-30749:1
so has part: feature:28674-30749:1:exon

WP_000205526.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28674-30749:1:exon

LA347_RS22180
type: Gene
subclass of: SO_0000704
RO_0002162: 564
locus tag: LA347_RS22180
old locus tag: LA347_22180
pseudo: true
so part of: sequence
location: complement(30857..>31042)
location: region:30857-31042:-1
so has part: feature:30857-31042:-1:exon
subclass of: SO_0000010

75060582
type: Gene
SIO_000068: ncbigene

position:30857:-1
position: 30857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31042:-1
position: 31042
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30857-31042:-1:exon

LA347_RS22180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 564
locus tag: LA347_RS22180
old locus tag: LA347_22180
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611389.1
GO process: GO:0015074 - DNA integration [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS3 family transposase
SIO_010081: LA347_RS22180
subclass of: SO_0000673
so part of: LA347_RS22180
location: complement(30857..>31042)
location: region:30857-31042:-1
so has part: feature:30857-31042:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:30857-31042:-1:exon

LA347_RS22185
type: Gene
subclass of: SO_0000704
RO_0002162: 564
locus tag: LA347_RS22185
old locus tag: LA347_22185
pseudo: true
so part of: sequence
location: complement(<31042..>31572)
location: region:31042-31572:-1
so has part: feature:31042-31572:-1:exon
subclass of: SO_0000010

75060583
type: Gene
SIO_000068: ncbigene

position:31572:-1
position: 31572
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31042-31572:-1:exon

LA347_RS22185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 564
locus tag: LA347_RS22185
old locus tag: LA347_22185
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000907654.1
note: incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS110-like element ISEc21 family transposase
SIO_010081: LA347_RS22185
subclass of: SO_0000673
so part of: LA347_RS22185
location: complement(<31042..>31572)
location: region:31042-31572:-1
so has part: feature:31042-31572:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:31042-31572:-1:exon

LA347_RS22190
type: Gene
subclass of: SO_0000704
RO_0002162: 564
locus tag: LA347_RS22190
old locus tag: LA347_22190
so part of: sequence
location: complement(31606..34491)
location: region:31606-34491:-1
so has part: feature:31606-34491:-1:exon
subclass of: SO_0000010

75060584
type: Gene
SIO_000068: ncbigene

position:31606:-1
position: 31606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34491:-1
position: 34491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31606-34491:-1:exon

LA347_RS22190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 564
locus tag: LA347_RS22190
old locus tag: LA347_22190
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001138082.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Tn3 family transposase
translation: MPRRVTLTDRQKDALLRLPTSQTDLLKHYTLSDEDLGHIRLRRRAHNRFGFALQLCVLRYPGRVLAPGELIPAEVIEFIGAQLGLGADDLVDYAAREETRHEHLAELRGLYGFRTFSGRGASELKEWLFREAEMAVSNEDIARRFVAECRRTRTVLPATSTIERLCAAALVDAERRIETRIASRLPMSIREQLLALLEETADDRVTRFVWLRQFEPGSNSSSANRLLDRLEYLQRIDLPEDLLAGVPAHRVTRLRRQGERYYADGMRDLPEDRRLAILAVCVSEWQAMLADAVVETHDRIVGRLYRASERICHAKVADEAGVVRDTLKSFAEIGGALVDAQDDGQPLGDVIASGSGWDGLKTLVAMATRLTATMADDPLNHVLDGYHRFRRYAPRMLRLLDLRAAPVALPLLEAVTALRTGLNDAAMTSFLRPSSKWHRHLRAQRAGDARLWEIAVLFHLRDAFRSGDVWLTRSRRYGDLKHALVPAQSIAEGGRLAVPLRPEEWLADRQARLDMRLRELGRAARAGTIPGGSIENGVLHIEKLEAAAPTGAEDLVLDLYKQIPPTRITDLLLEVDAATGFTEAFTHLRTGAPCADRIGLMNVILAEGINLGLRKMADATNTHTFWELIRIGRWHVEGEAYDRALAMVVEAQAALPMARFWGMGTSASSDGQFFVATEQGEAMNLVNAKYGNTPGLKAYSHVSDQYAPFATQVIPATASEAPYILDGLLMNDAGRHIREQFTDTGGFTDHVFAACAILGYRFAPRIRDLPSKRLYAFNPSAAPAHLRALIGGKVNQAMIERNWPDILRIAATIAAGTVAPSQILRKLASYPRQNELATALREVGRVERTLFMIDWILDAELQRRAQIGLNKGEAHHALKRAISFHRRGEIRDRSAEGQHYRIAGMNLLAAIIIFWNTMKLGEVVANQKRDGKLLSPDLLAHVSPLGWEHINLTGEYRWPKP
SIO_010081: LA347_RS22190
subclass of: SO_0000673
so part of: LA347_RS22190
location: complement(31606..34491)
location: region:31606-34491:-1
so has part: feature:31606-34491:-1:exon

WP_001138082.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31606-34491:-1:exon

LA347_RS22195
type: Gene
subclass of: SO_0000704
RO_0002162: 564
locus tag: LA347_RS22195
old locus tag: LA347_22195
so part of: sequence
location: 34617..35240
location: region:34617-35240:1
so has part: feature:34617-35240:1:exon
subclass of: SO_0000010

75060585
type: Gene
SIO_000068: ncbigene

position:34617:1
position: 34617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35240:1
position: 35240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34617-35240:1:exon

LA347_RS22195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 564
locus tag: LA347_RS22195
old locus tag: LA347_22195
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000904896.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MLIGYARVSKADGSQSLDLQHDALRAAGVERDNIYDDLASGGRDDRPGLTACLKSLRDGDVLVVWKLDRLGRSLAHLVNTVKELSDRKIGLRVLTGKGAQIDTTTASGRMVFGIFATLAEFERDLIRERTMAGLASARARGRKGGRKFALTKAQVRLAQAAMAQRDTSVSDLCKELGIERVTLYRYVGPKGELRDHGGLASVSFRSF
SIO_010081: LA347_RS22195
subclass of: SO_0000673
so part of: LA347_RS22195
location: 34617..35240
location: region:34617-35240:1
so has part: feature:34617-35240:1:exon

WP_000904897.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34617-35240:1:exon

LA347_RS22200
type: Gene
subclass of: SO_0000704
RO_0002162: 564
locus tag: LA347_RS22200
old locus tag: LA347_22200
pseudo: true
so part of: sequence
location: 35271..>36202
location: region:35271-36202:1
so has part: feature:35271-36202:1:exon
subclass of: SO_0000010

75060586
type: Gene
SIO_000068: ncbigene

position:35271:1
position: 35271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36202:1
position: 36202
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35271-36202:1:exon

LA347_RS22200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 564
locus tag: LA347_RS22200
old locus tag: LA347_22200
inference: COORDINATES: similar to AA sequence:RefSeq:WP_086558163.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS3-like element IS1133 family transposase
SIO_010081: LA347_RS22200
subclass of: SO_0000673
so part of: LA347_RS22200
location: 35271..>36202
location: region:35271-36202:1
so has part: feature:35271-36202:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:35271-36202:1:exon

LA347_RS22205
type: Gene
subclass of: SO_0000704
RO_0002162: 564
locus tag: LA347_RS22205
old locus tag: LA347_22205
so part of: sequence
location: complement(36233..39238)
location: region:36233-39238:-1
so has part: feature:36233-39238:-1:exon
subclass of: SO_0000010

75060587
type: Gene
SIO_000068: ncbigene

position:36233:-1
position: 36233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39238:-1
position: 39238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36233-39238:-1:exon

LA347_RS22205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 564
locus tag: LA347_RS22205
old locus tag: LA347_22205
inference: COORDINATES: similar to AA sequence:RefSeq:WP_032495017.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Tn3-like element Tn3 family transposase
translation: MPVDFLTTEQTESYGRFTGEPDELQLARYFHLDEADKEFIGKSRGDHNRLGIALQIGCVRFLGTFLTDMNHIPSGVRHFTARQLGIRDITVLAEYGQRENTRREHAALIRQHYQYREFAWPWTFRLTRLLYTRSWISNERPGLLFDLATGWLMQHRIILPGATTLTRLISEVREKATLRLWNKLALIPSAEQRSQLEMLLGPTDCSRLSLLESLKKGPVTISGPAFNEAIERWKTLNDFGLHAENLSTLPAVRLKNLARYAGMTSVFNIARMSPQKRMAVLVAFVLAWETLALDDALDVLDAMLAVIIRDARKIGQKKRLRSLKDLDKSALALASACSYLLKEETPDESIRAEVFSYIPRQKLAEIITLVREIARPSDDNFHEEMVEQYGRVRRFLPHLLNTVKFSSAPAGVTTLNACDYLSREFSSRRQFFDDAPTEIISRSWKRLVINKEKHITRRGYTLCFLSKLQDSLRRRDVYVTGSNRWGDPRARLLQGADWQANRIKVYRSLGHPTDPQEAIKSLGHQLDSRYRQVAARLCENEAVELDVSGPKPRLTISPLASLDEPDSLKRLSKMISDLLPPVDLTELLLEINAHTGFADEFFHASEASARVDDLPVSISAVLMAEACNIGLEPLIRSNVPALTRHRLNWTKANYLRAETITSANARLVDFQATLPLAQIWGGGEVASADGMRFVTPVRTINAGPNRKYFGNNRGITWYNFVSDQYSGFHGIVIPGTLRDSIFVLEGLLEQETGLNPTEIMTDTAGASELVFGLFWLLGYQFSPRLADAGASVFWRMDHDADYGVLNDIARGQSDPRKIVLQWDEMIRTAGSLKLGKVQVSVLVRSLLKSERPSGLTQAIIEVGRINKTLYLLNYIDDEDYRRRILTQLNRGESRHAVARAICHGQKGEIRKRYTDGQEDQLGTLGLVTNAVVLWNTIYMQAALDHLRAQGETLNDEDIARLSPLCHGHINMLGHYSFTLAELVTKGHLRPLKEASEAENVA
SIO_010081: LA347_RS22205
subclass of: SO_0000673
so part of: LA347_RS22205
location: complement(36233..39238)
location: region:36233-39238:-1
so has part: feature:36233-39238:-1:exon

WP_001143760.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36233-39238:-1:exon

LA347_RS22210
type: Gene
subclass of: SO_0000704
RO_0002162: 564
locus tag: LA347_RS22210
old locus tag: LA347_22210
so part of: sequence
location: 39402..39959
location: region:39402-39959:1
so has part: feature:39402-39959:1:exon
subclass of: SO_0000010

75060588
type: Gene
SIO_000068: ncbigene

position:39402:1
position: 39402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39959:1
position: 39959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39402-39959:1:exon

LA347_RS22210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 564
locus tag: LA347_RS22210
old locus tag: LA347_22210
inference: COORDINATES: similar to AA sequence:RefSeq:YP_005221001.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MRLFGYARVSTSQQSLDLQVRALKDAGVKANRIFTDKASGSSTDREGLDLLRMKVEEGDVILVKKLDRLGRDTADMIQLIKEFDAQGVAVRFIDDGISTDGDMGQMVVTILSAVAQAERRRILERTNEGRQEAKLKGIKFGRRRTVDRNVVLTLHQKGTGATEIAHQLSIARSTVYKILEDERAS
SIO_010081: LA347_RS22210
subclass of: SO_0000673
so part of: LA347_RS22210
location: 39402..39959
location: region:39402-39959:1
so has part: feature:39402-39959:1:exon

WP_001235713.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39402-39959:1:exon

LA347_RS22215
type: Gene
subclass of: SO_0000704
RO_0002162: 564
locus tag: LA347_RS22215
old locus tag: LA347_22215
so part of: sequence
location: 40142..41002
location: region:40142-41002:1
so has part: feature:40142-41002:1:exon
subclass of: SO_0000010

75060589
type: Gene
SIO_000068: ncbigene

position:40142:1
position: 40142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41002:1
position: 41002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40142-41002:1:exon

LA347_RS22215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 564
locus tag: LA347_RS22215
old locus tag: LA347_22215
EC number: 3.5.2.6
inference: COORDINATES: similar to AA sequence:RefSeq:WP_032489893.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: broad-spectrum class A beta-lactamase TEM-1
translation: MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPAAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGASLIKHW
SIO_010081: LA347_RS22215
subclass of: SO_0000673
so part of: LA347_RS22215
location: 40142..41002
location: region:40142-41002:1
so has part: feature:40142-41002:1:exon

WP_000027057.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:40142-41002:1:exon

LA347_RS22220
type: Gene
subclass of: SO_0000704
RO_0002162: 564
locus tag: LA347_RS22220
old locus tag: LA347_22220
pseudo: true
so part of: sequence
location: <41151..41711
location: region:41151-41711:1
so has part: feature:41151-41711:1:exon
subclass of: SO_0000010

75060590
type: Gene
SIO_000068: ncbigene

position:41151:1
position: 41151
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:41711:1
position: 41711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41151-41711:1:exon

LA347_RS22220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 564
locus tag: LA347_RS22220
old locus tag: LA347_22220
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001339197.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS4-like element ISVsa5 family transposase
SIO_010081: LA347_RS22220
subclass of: SO_0000673
so part of: LA347_RS22220
location: <41151..41711
location: region:41151-41711:1
so has part: feature:41151-41711:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:41151-41711:1:exon

LA347_RS22225
type: Gene
subclass of: SO_0000704
RO_0002162: 564
locus tag: LA347_RS22225
old locus tag: LA347_22225
so part of: sequence
location: complement(41721..42137)
location: region:41721-42137:-1
so has part: feature:41721-42137:-1:exon
subclass of: SO_0000010

75060591
type: Gene
SIO_000068: ncbigene

position:41721:-1
position: 41721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42137:-1
position: 42137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41721-42137:-1:exon

LA347_RS22225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 564
locus tag: LA347_RS22225
old locus tag: LA347_22225
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000275181.1
GO function: GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AraC family transcriptional regulator
translation: MYIEQHSRYQNKANNIQLRYDDKQFHTTVIKDVLLWIEHNLDQSLLLDDVANKAGYTKWYFQRLFKKVTGVTLASYIRARRLTKAAVELRLTKKTILEIALKYQFDSQQSFTRRFKYIFKVTPSYYRRNKLWELEAMH
SIO_010081: LA347_RS22225
subclass of: SO_0000673
so part of: LA347_RS22225
location: complement(41721..42137)
location: region:41721-42137:-1
so has part: feature:41721-42137:-1:exon

WP_000275180.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41721-42137:-1:exon

LA347_RS22230
type: Gene
subclass of: SO_0000704
RO_0002162: 564
gene: tetC
locus tag: LA347_RS22230
old locus tag: LA347_22230
so part of: sequence
location: 42225..42818
location: region:42225-42818:1
so has part: feature:42225-42818:1:exon
subclass of: SO_0000010

75060592
type: Gene
SIO_000068: ncbigene

position:42225:1
position: 42225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42818:1
position: 42818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42225-42818:1:exon

LA347_RS22230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 564
gene: tetC
locus tag: LA347_RS22230
old locus tag: LA347_22230
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000428546.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tetracyline resistance-associated transcriptional repressor TetC
translation: MENKNHQQENFKSTYQSLVNSARILFVEKGYQAVSIDEISGKALVTKGAFYHHFKNKKQLLSACYKQQLIMIDAYITTKTDLTNGWSALESIFEHYLDYIIDNNKNLIPIQEVMPIIGWNELEKISLEYITGKVNAIVSKLIQENQLKAYDDDVLKNLLNGWFMHIAIHAKNLKELADKKGQFIAIYRGFLLSLKDK
SIO_010081: LA347_RS22230
subclass of: SO_0000673
so part of: LA347_RS22230
location: 42225..42818
location: region:42225-42818:1
so has part: feature:42225-42818:1:exon

WP_000428546.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42225-42818:1:exon

LA347_RS22235
type: Gene
subclass of: SO_0000704
RO_0002162: 564
gene: tet(B)
locus tag: LA347_RS22235
old locus tag: LA347_22235
so part of: sequence
location: complement(42931..44136)
location: region:42931-44136:-1
so has part: feature:42931-44136:-1:exon
subclass of: SO_0000010

75060593
type: Gene
SIO_000068: ncbigene

position:42931:-1
position: 42931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44136:-1
position: 44136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42931-44136:-1:exon

LA347_RS22235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 564
gene: tet(B)
locus tag: LA347_RS22235
old locus tag: LA347_22235
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001089064.1
GO component: GO:0016021 - integral component of membrane [Evidence IEA]
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tetracycline efflux MFS transporter Tet(B)
translation: MNSSTKIALVITLLDAMGIGLIMPVLPTLLREFIASEDIANHFGVLLALYALMQVIFAPWLGKMSDRFGRRPVLLLSLIGASLDYLLLAFSSALWMLYLGRLLSGITGATGAVAASVIADTTSASQRVKWFGWLGASFGLGLIAGPIIGGFAGEISPHSPFFIAALLNIVAFLVVMFWFRETKNTRDNTDTEVGVETQSNSVYITLFKTMPILLIIYFSAQLIGQIPATVWVLFTENRFGWNSMMVGFSLAGLGLLHSVFQAFVAGRIATKWGEKTAVLLGFIADSSAFAFLAFISEGWLVFPVLILLAGGGIALPALQGVMSIQTKSHQQGALQGLLVSLTNATGVIGPLLFAVIYNHSLPIWDGWIWIIGLAFYCIIILLSMTFMLTPQAQGSKQETSA
SIO_010081: LA347_RS22235
subclass of: SO_0000673
so part of: LA347_RS22235
location: complement(42931..44136)
location: region:42931-44136:-1
so has part: feature:42931-44136:-1:exon

WP_001089068.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42931-44136:-1:exon

LA347_RS22240
type: Gene
subclass of: SO_0000704
RO_0002162: 564
gene: tetR(B)
locus tag: LA347_RS22240
old locus tag: LA347_22240
so part of: sequence
location: 44218..44841
location: region:44218-44841:1
so has part: feature:44218-44841:1:exon
subclass of: SO_0000010

75060594
type: Gene
SIO_000068: ncbigene

position:44218:1
position: 44218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44841:1
position: 44841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44218-44841:1:exon

LA347_RS22240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 564
gene: tetR(B)
locus tag: LA347_RS22240
old locus tag: LA347_22240
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000088605.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tetracycline resistance transcriptional repressor TetR(B)
translation: MSRLDKSKVINSALELLNEVGIEGLTTRKLAQKLGVEQPTLYWHVKNKRALLDALAIEMLDRHHTHFCPLEGESWQDFLRNNAKSFRCALLSHRDGAKVHLGTRPTEKQYETLENQLAFLCQQGFSLENALYALSAVGHFTLGCVLEDQEHQVAKEERETPTTDSMPPLLRQAIELFDHQGAEPAFLFGLELIICGLEKQLKCESGS
SIO_010081: LA347_RS22240
subclass of: SO_0000673
so part of: LA347_RS22240
location: 44218..44841
location: region:44218-44841:1
so has part: feature:44218-44841:1:exon

WP_000088605.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44218-44841:1:exon

LA347_RS22245
type: Gene
subclass of: SO_0000704
RO_0002162: 564
locus tag: LA347_RS22245
old locus tag: LA347_22245
so part of: sequence
location: complement(44819..45505)
location: region:44819-45505:-1
so has part: feature:44819-45505:-1:exon
subclass of: SO_0000010

75060595
type: Gene
SIO_000068: ncbigene

position:44819:-1
position: 44819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45505:-1
position: 45505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44819-45505:-1:exon

LA347_RS22245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 564
locus tag: LA347_RS22245
old locus tag: LA347_22245
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001284954.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: winged helix-turn-helix domain-containing protein
translation: MANLIRKEVTFESSIAAIGAAMSDISRVKILSALMDGRAWTATELSSVANISASTASSHLSKLLDCQLITVVAQGKHRYFRLAGKDIAELMESMMGISLNHGVHAKVSTPVHLRKARTCYDHLAGEVAVKIYDSLCQQQWITENGSMITLSGIQYFHEMGIDVPSKHSRKICCACLDWSERRFHLGGYVGAALFSLYESKGWLTRHLGYREVTITEKGYAAFKTHFHI
SIO_010081: LA347_RS22245
subclass of: SO_0000673
so part of: LA347_RS22245
location: complement(44819..45505)
location: region:44819-45505:-1
so has part: feature:44819-45505:-1:exon

WP_001284954.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44819-45505:-1:exon

LA347_RS22250
type: Gene
subclass of: SO_0000704
RO_0002162: 564
locus tag: LA347_RS22250
old locus tag: LA347_22250
so part of: sequence
location: complement(45513..45899)
location: region:45513-45899:-1
so has part: feature:45513-45899:-1:exon
subclass of: SO_0000010

75060596
type: Gene
SIO_000068: ncbigene

position:45513:-1
position: 45513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45899:-1
position: 45899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45513-45899:-1:exon

LA347_RS22250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 564
locus tag: LA347_RS22250
old locus tag: LA347_22250
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000460649.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFDVHVVLDNQIGQLALLGKTLGNKGIGLEGGGIFTVGDECHAHFLVEQGKEAKIALEQAGLLVLAIRTPLIRKLKQEKPGELGEIARVLAENNINILVQYSDHANQLILITDNDSMAASVTLPWAIK
SIO_010081: LA347_RS22250
subclass of: SO_0000673
so part of: LA347_RS22250
location: complement(45513..45899)
location: region:45513-45899:-1
so has part: feature:45513-45899:-1:exon

WP_000460651.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45513-45899:-1:exon

LA347_RS22255
type: Gene
subclass of: SO_0000704
RO_0002162: 564
locus tag: LA347_RS22255
old locus tag: LA347_22255
so part of: sequence
location: complement(45892..46212)
location: region:45892-46212:-1
so has part: feature:45892-46212:-1:exon
subclass of: SO_0000010

75060597
type: Gene
SIO_000068: ncbigene

position:45892:-1
position: 45892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46212:-1
position: 46212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45892-46212:-1:exon

LA347_RS22255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 564
locus tag: LA347_RS22255
old locus tag: LA347_22255
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000562370.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: antibiotic biosynthesis monooxygenase
translation: MIAVIFEVQIQPDQQTRYLTLAEELRPLLSHVAGFISIERFQSLATEGKMLSLSWWENEYAVLQWKNHVLHAKAQQEGRESIFDFYKISIAHITREYSFKKDKDNV
SIO_010081: LA347_RS22255
subclass of: SO_0000673
so part of: LA347_RS22255
location: complement(45892..46212)
location: region:45892-46212:-1
so has part: feature:45892-46212:-1:exon

WP_000562370.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45892-46212:-1:exon

LA347_RS22260
type: Gene
subclass of: SO_0000704
RO_0002162: 564
gene: gltS
locus tag: LA347_RS22260
old locus tag: LA347_22260
so part of: sequence
location: 46656..47861
location: region:46656-47861:1
so has part: feature:46656-47861:1:exon
subclass of: SO_0000010

75060598
type: Gene
SIO_000068: ncbigene

position:46656:1
position: 46656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47861:1
position: 47861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46656-47861:1:exon

LA347_RS22260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 564
gene: gltS
locus tag: LA347_RS22260
old locus tag: LA347_22260
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000599530.1
GO function: GO:0015501 - glutamate:sodium symporter activity [Evidence IEA]
GO process: GO:0015813 - L-glutamate transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: sodium/glutamate symporter
translation: MILDASYTLLVACIALLIGMFVVKFTPFLQKNHIPEAVVGGFIVAIVLLIIDKTSGYSFTFDASLQSLLMLTFFSSIGLSSDFSRLIKGGKPLVLLTIAVTILIAIQNTVGMSMAVMMNESPFIGLIAGSITLTGGHGNAGAWGPILADKYGVTGAVELAMACATLGLVLGGLVGGPVARHLLKKVSIPKTTEQERDTIVEAFEQPSVKRKINANNVIETISMLIICIVVGGYISALFKDTFLQLPTFVWCLFVGIIIRNTLTHVFKHEVFEPTVDVLGSVALSLFLAMALMSLKFGQLASMAGPVLIIIAVQTVVMVLFACFVTFKMMGKDYDAVVISAGHCGFGMGATPTAIANMQTVTKAFGPSHKAFLVVPMVGAFIVDISNSILIKIFIEIGTYFT
SIO_010081: LA347_RS22260
subclass of: SO_0000673
so part of: LA347_RS22260
location: 46656..47861
location: region:46656-47861:1
so has part: feature:46656-47861:1:exon

WP_000599533.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:46656-47861:1:exon

LA347_RS22265
type: Gene
subclass of: SO_0000704
RO_0002162: 564
locus tag: LA347_RS22265
old locus tag: LA347_22265
pseudo: true
so part of: sequence
location: 48092..>48211
location: region:48092-48211:1
so has part: feature:48092-48211:1:exon
subclass of: SO_0000010

75060599
type: Gene
SIO_000068: ncbigene

position:48092:1
position: 48092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48211:1
position: 48211
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48092-48211:1:exon

LA347_RS22265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 564
locus tag: LA347_RS22265
old locus tag: LA347_22265
inference: COORDINATES: similar to AA sequence:RefSeq:YP_005227464.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: LysR family transcriptional regulator
SIO_010081: LA347_RS22265
subclass of: SO_0000673
so part of: LA347_RS22265
location: 48092..>48211
location: region:48092-48211:1
so has part: feature:48092-48211:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:48092-48211:1:exon

LA347_RS22270
type: Gene
subclass of: SO_0000704
RO_0002162: 564
locus tag: LA347_RS22270
old locus tag: LA347_22270
so part of: sequence
location: complement(48227..49435)
location: region:48227-49435:-1
so has part: feature:48227-49435:-1:exon
subclass of: SO_0000010

75060600
type: Gene
SIO_000068: ncbigene

position:48227:-1
position: 48227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49435:-1
position: 49435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48227-49435:-1:exon

LA347_RS22270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 564
locus tag: LA347_RS22270
old locus tag: LA347_22270
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001339197.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS4-like element ISVsa5 family transposase
translation: MCELDILHDSLYQFCPELHLKRLNSLTLACHALLDCKTLTLTELGRNLPTKARTKHNIKRIDRLLGNRHLHKERLAVYRWHASFICSGNTMPIVLVDWSDIREQKRLMVLRASVALHGRSVTLYEKAFPLSEQCSKKAHDQFLADLASILPSNTTPLIVSDAGFKVPWYKSVEKLGWYWLSRVRGKVQYADLGAENWKPISNLHDMSSSHSKTLGYKRLTKSNPISCQILLYKSRSKGRKNQRSTRTHCHHPSPKIYSASAKEPWILATNLPVEIRTPKQLVNIYSKRMQIEETFRDLKSPAYGLGLRHSRTSSSERFDIMLLIALMLQLTCWLAGVHAQKQGWDKHFQANTVRNRNVLSTVRLGMEVLRHSGYTITREDSLVAATLLTQNLFTHGYVLGKL
SIO_010081: LA347_RS22270
subclass of: SO_0000673
so part of: LA347_RS22270
location: complement(48227..49435)
location: region:48227-49435:-1
so has part: feature:48227-49435:-1:exon

WP_001352368.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48227-49435:-1:exon

LA347_RS22275
type: Gene
subclass of: SO_0000704
RO_0002162: 564
gene: aph(3'')-Ib
locus tag: LA347_RS22275
old locus tag: LA347_22275
so part of: sequence
location: 49721..50524
location: region:49721-50524:1
so has part: feature:49721-50524:1:exon
subclass of: SO_0000010

75060601
type: Gene
SIO_000068: ncbigene

position:49721:1
position: 49721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50524:1
position: 50524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49721-50524:1:exon

LA347_RS22275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 564
gene: aph(3'')-Ib
locus tag: LA347_RS22275
old locus tag: LA347_22275
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010890156.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aminoglycoside O-phosphotransferase APH(3'')-Ib
translation: MNRTNIFFGESHSDWLPVRGGESGDFVFRRGDGHAFAKIAPASRRGELAGERDRLIWLKGRGVACPEVINWQEEQEGACLVITAIPGVPAADLSGADLLKAWPSMGQQLGAVHSLSVDQCPFERRLSRMFGRAVDVVSRNAVNPDFLPDEDKSTPQLDLLARVERELPVRLDQERTDMVVCHGDPCMPNFMVDPKTLQCTGLIDLGRLGTADRYADLALMIANAEENWAAPDEAERAFAVLFNVLGIEAPDRERLAFYLRLDPLTWG
SIO_010081: LA347_RS22275
subclass of: SO_0000673
so part of: LA347_RS22275
location: 49721..50524
location: region:49721-50524:1
so has part: feature:49721-50524:1:exon

WP_001082319.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49721-50524:1:exon

LA347_RS22280
type: Gene
subclass of: SO_0000704
RO_0002162: 564
locus tag: LA347_RS22280
old locus tag: LA347_22280
so part of: sequence
location: 50524..51360
location: region:50524-51360:1
so has part: feature:50524-51360:1:exon
subclass of: SO_0000010

75060602
type: Gene
SIO_000068: ncbigene

position:51360:1
position: 51360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50524-51360:1:exon

LA347_RS22280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 564
locus tag: LA347_RS22280
old locus tag: LA347_22280
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000480972.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: aminoglycoside O-phosphotransferase APH(6)-Id
translation: MFMPPVFPAHWHVSQPVLIADTFSSLVWKVSLPDGTPAIVKGLKPIEDIADELRGADYLVWRNGRGAVRLLGRENNLMLLEYAGERMLSHIVAEHGDYQATEIAAELMAKLYAASEEPLPSALLPIRDRFAALFQRARDDQNAGCQTDYVHAAIIADQMMSNASELRGLHGDLHHENIMFSSRGWLVIDPVGLVGEVGFGAANMFYDPADRDDLCLDPRRIAQMADAFSRALDVDPRRLLDQAYAYGCLSAAWNADGEEEQRDLAIAAAIKQVRQTSY
SIO_010081: LA347_RS22280
subclass of: SO_0000673
so part of: LA347_RS22280
location: 50524..51360
location: region:50524-51360:1
so has part: feature:50524-51360:1:exon

WP_000480968.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50524-51360:1:exon

LA347_RS22285
type: Gene
subclass of: SO_0000704
RO_0002162: 564
locus tag: LA347_RS22285
old locus tag: LA347_22285
pseudo: true
so part of: sequence
location: complement(<51467..51898)
location: region:51467-51898:-1
so has part: feature:51467-51898:-1:exon
subclass of: SO_0000010

75060603
type: Gene
SIO_000068: ncbigene

position:51467:-1
position: 51467
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:51898:-1
position: 51898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51467-51898:-1:exon

LA347_RS22285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 564
locus tag: LA347_RS22285
old locus tag: LA347_22285
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000907654.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS110 family transposase
SIO_010081: LA347_RS22285
subclass of: SO_0000673
so part of: LA347_RS22285
location: complement(<51467..51898)
location: region:51467-51898:-1
so has part: feature:51467-51898:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:51467-51898:-1:exon

LA347_RS22290
type: Gene
subclass of: SO_0000704
RO_0002162: 564
locus tag: LA347_RS22290
old locus tag: LA347_22290
pseudo: true
so part of: sequence
location: complement(<52180..53036)
location: region:52180-53036:-1
so has part: feature:52180-53036:-1:exon
subclass of: SO_0000010

75060604
type: Gene
SIO_000068: ncbigene

position:52180:-1
position: 52180
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:53036:-1
position: 53036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52180-53036:-1:exon

LA347_RS22290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 564
locus tag: LA347_RS22290
old locus tag: LA347_22290
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611389.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS3 family transposase
SIO_010081: LA347_RS22290
subclass of: SO_0000673
so part of: LA347_RS22290
location: complement(<52180..53036)
location: region:52180-53036:-1
so has part: feature:52180-53036:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:52180-53036:-1:exon

LA347_RS22295
type: Gene
subclass of: SO_0000704
RO_0002162: 564
locus tag: LA347_RS22295
old locus tag: LA347_22295
so part of: sequence
location: complement(53240..53656)
location: region:53240-53656:-1
so has part: feature:53240-53656:-1:exon
subclass of: SO_0000010

75060605
type: Gene
SIO_000068: ncbigene

position:53240:-1
position: 53240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53656:-1
position: 53656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53240-53656:-1:exon

LA347_RS22295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 564
locus tag: LA347_RS22295
old locus tag: LA347_22295
inference: COORDINATES: similar to AA sequence:RefSeq:YP_005229630.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system VapC family toxin
translation: MKKTWMLDTNICSFIMREQPAAVLKRLEQAVLRGDRIVVSAVTYAEMRFGATGPKASPRHIQLVDAFCARLDAVLPWDRAAVDATTDIRVALRLAGTPIGPNDTAIAGHAIAAGAILVTNNVREFARVPGLVLEDWVK
SIO_010081: LA347_RS22295
subclass of: SO_0000673
so part of: LA347_RS22295
location: complement(53240..53656)
location: region:53240-53656:-1
so has part: feature:53240-53656:-1:exon

WP_000754566.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:53240-53656:-1:exon

LA347_RS22300
type: Gene
subclass of: SO_0000704
RO_0002162: 564
gene: vapB
locus tag: LA347_RS22300
old locus tag: LA347_22300
so part of: sequence
location: complement(53653..53883)
location: region:53653-53883:-1
so has part: feature:53653-53883:-1:exon
subclass of: SO_0000010

75060606
type: Gene
SIO_000068: ncbigene

position:53653:-1
position: 53653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53883:-1
position: 53883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53653-53883:-1:exon

LA347_RS22300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 564
gene: vapB
locus tag: LA347_RS22300
old locus tag: LA347_22300
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004213073.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system VapB family antitoxin
translation: MRTVSIFKNGNNRAIRLPRDLDFDGVSELEIVREGDSIILRPVRPTWGSFAQLDRADPDFMAEREDVVSDEGRFEP
SIO_010081: LA347_RS22300
subclass of: SO_0000673
so part of: LA347_RS22300
location: complement(53653..53883)
location: region:53653-53883:-1
so has part: feature:53653-53883:-1:exon

WP_001261276.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:53653-53883:-1:exon

LA347_RS22305
type: Gene
subclass of: SO_0000704
RO_0002162: 564
locus tag: LA347_RS22305
old locus tag: LA347_22305
so part of: sequence
location: 54457..54807
location: region:54457-54807:1
so has part: feature:54457-54807:1:exon
subclass of: SO_0000010

75060607
type: Gene
SIO_000068: ncbigene

position:54457:1
position: 54457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:54807:1
position: 54807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54457-54807:1:exon

LA347_RS22305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 564
locus tag: LA347_RS22305
old locus tag: LA347_22305
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000493378.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFTAFNERNDFSYAFEKIRNAISAPGENNLYAATELGLGILLRKYEQFRQELDAAGELGNWEYDLDTYNHCIAVLQRYFTGNPSGLTERDARIYSHYLQTEHKRFVKLAEELAAGR
SIO_010081: LA347_RS22305
subclass of: SO_0000673
so part of: LA347_RS22305
location: 54457..54807
location: region:54457-54807:1
so has part: feature:54457-54807:1:exon

WP_000493378.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:54457-54807:1:exon

LA347_RS22310
type: Gene
subclass of: SO_0000704
RO_0002162: 564
locus tag: LA347_RS22310
old locus tag: LA347_22310
so part of: sequence
location: 54858..55601
location: region:54858-55601:1
so has part: feature:54858-55601:1:exon
subclass of: SO_0000010

75060608
type: Gene
SIO_000068: ncbigene

position:54858:1
position: 54858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55601:1
position: 55601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54858-55601:1:exon

LA347_RS22310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 564
locus tag: LA347_RS22310
old locus tag: LA347_22310
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016243889.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTDIQAATESIVAATSHPVSVQLINQGAGIWGNVATGLITGLLTGGITLTGIWLTHYFTLKRERQASEDKMKKELHYIATELVFMLERYAEGCFRVVTDDGQDDDAPQPERKAVTNYPELNLIDVSGDWRTLEPRLMYRIRELPVLQDEAHRAIAYAAEYSDPPWHKDYFRERQYQFTRLGINAVILAVRLRKATGMPETRLTGHDEWSAVSVFRKVWRRERALRAAEATRNREWNQLVIPDGMSNQ
SIO_010081: LA347_RS22310
subclass of: SO_0000673
so part of: LA347_RS22310
location: 54858..55601
location: region:54858-55601:1
so has part: feature:54858-55601:1:exon

WP_000129823.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:54858-55601:1:exon

LA347_RS22315
type: Gene
subclass of: SO_0000704
RO_0002162: 564
locus tag: LA347_RS22315
old locus tag: LA347_22315
so part of: sequence
location: 55598..56374
location: region:55598-56374:1
so has part: feature:55598-56374:1:exon
subclass of: SO_0000010

75060609
type: Gene
SIO_000068: ncbigene

position:55598:1
position: 55598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:56374:1
position: 56374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55598-56374:1:exon

LA347_RS22315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 564
locus tag: LA347_RS22315
old locus tag: LA347_22315
inference: COORDINATES: similar to AA sequence:RefSeq:WP_000015958.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: site-specific integrase
translation: MSGLLSYSHPQQPAQMPVAIDYPAALALRQMALVQDELPKYLLAPEVSALLHYVPDLHRKMLLATLWNTGARINEALALTRGDFSLVPPYPFVQLATLKQRTEKAARTAGRAPAGSQAHRLVPLSDHHYVSQLQMMVATLKIPLERRNKRTGRTEKARIWDITDRTVRTWIGEAVEAAAVDGVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQSLMGHKSISSTEVYTKVFALDVAARHRVQFQMPEADAVAMLKGNI
SIO_010081: LA347_RS22315
subclass of: SO_0000673
so part of: LA347_RS22315
location: 55598..56374
location: region:55598-56374:1
so has part: feature:55598-56374:1:exon

WP_000015958.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:55598-56374:1:exon

LA347_RS22320
type: Gene
subclass of: SO_0000704
RO_0002162: 564
locus tag: LA347_RS22320
old locus tag: LA347_22320
so part of: sequence
location: complement(56432..56689)
location: region:56432-56689:-1
so has part: feature:56432-56689:-1:exon
subclass of: SO_0000010

75060610
type: Gene
SIO_000068: ncbigene

position:56432:-1
position: 56432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:56689:-1
position: 56689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56432-56689:-1:exon

LA347_RS22320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 564
locus tag: LA347_RS22320
old locus tag: LA347_22320
inference: COORDINATES: similar to AA sequence:RefSeq:YP_005229619.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKLETIQIDNTVRSGLNSFTDGVIIRDTKVLITLNLPDGQKTTIEGESRHMSDANRLSERITMLQHAIYEQYEEYRADIPVSWSR
SIO_010081: LA347_RS22320
subclass of: SO_0000673
so part of: LA347_RS22320
location: complement(56432..56689)
location: region:56432-56689:-1
so has part: feature:56432-56689:-1:exon

WP_000764641.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:56432-56689:-1:exon

LA347_RS22325
type: Gene
subclass of: SO_0000704
RO_0002162: 564
locus tag: LA347_RS22325
old locus tag: LA347_22325
so part of: sequence
location: complement(56818..56922)
location: region:56818-56922:-1
so has part: feature:56818-56922:-1:exon
subclass of: SO_0000010

75060611
type: Gene
SIO_000068: ncbigene

position:56818:-1
position: 56818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:56922:-1
position: 56922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56818-56922:-1:exon

LA347_RS22325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 564
locus tag: LA347_RS22325
old locus tag: LA347_22325
inference: COORDINATES: similar to AA sequence:RefSeq:YP_005229618.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRSFTIMSLLETFLTASQGATILFLAMLIYWQKR
SIO_010081: LA347_RS22325
subclass of: SO_0000673
so part of: LA347_RS22325
location: complement(56818..56922)
location: region:56818-56922:-1
so has part: feature:56818-56922:-1:exon

WP_032409716.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:56818-56922:-1:exon