Corynebacterium doosanense CAU 212 = DSM 45436 strain CAU 212(T) plasmid pCdoos1, complete sequence.
type: Entry
definition: Corynebacterium doosanense CAU 212 = DSM 45436 strain CAU 212(T) plasmid pCdoos1, complete sequence.
sequence version: NZ_CP006765.1
sequence date: 2023-05-03
sequence: sequence
division: CON
label: NZ_CP006765.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN02356458
keyword: RefSeq
source: Corynebacterium doosanense CAU 212 = DSM 45436
organism: Corynebacterium doosanense CAU 212 = DSM 45436
taxonomy: Bacteria; Actinomycetota; Actinomycetes; Mycobacteriales; Corynebacteriaceae; Corynebacterium.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP006765.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Assembly-Data-START##\nAssembly Method :: Newbler v. 2.8\nCoverage :: 166.52x\nSequencing Technology :: Illumina\n##Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 05/03/2023 03:08:15\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 2,664\nCDSs (total) :: 2,597\nGenes (coding) :: 2,541\nCDSs (with protein) :: 2,541\nGenes (RNA) :: 67\nrRNAs :: 4, 4, 4 (5S, 16S, 23S)\ncomplete rRNAs :: 4, 4, 4 (5S, 16S, 23S)\ntRNAs :: 52\nncRNAs :: 3\nPseudo Genes (total) :: 56\nCDSs (without protein) :: 56\nPseudo Genes (ambiguous residues) :: 0 of 56\nPseudo Genes (frameshifted) :: 24 of 56\nPseudo Genes (incomplete) :: 32 of 56\nPseudo Genes (internal stop) :: 10 of 56\nPseudo Genes (multiple problems) :: 10 of 56\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 27197
topology: circular
so has quality: SO_0000988
location: 1..27197
location: region:1-27197:1
RO_0002162: 558173

NZ_CP006765
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN02356458
type: BioSample
SIO_000068: biosample

1
title: Complete genome sequence of Corynebacterium doosanense CAU 212(T) (=DSM 45436(T)), isolated from activated sludge
author: Schaffert, L.
author: Albersmeier, A.
author: Kalinowski, J.
author: Ruckert, C.
journal: Unpublished

2
title: Direct Submission
author: Schaffert, L.
author: Albersmeier, A.
author: Kalinowski, J.
author: Ruckert, C.
journal: Submitted (23-SEP-2013) CeBiTec, Bielefeld University, Universitaetsstr. 27, Bielefeld, NRW 33615, Germany

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27197:1
position: 27197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-27197:1:source
so part of: sequence
organism: Corynebacterium doosanense CAU 212 = DSM 45436
mol type: genomic DNA
strain: CAU 212(T)
culture collection: DSM:45436
type material: type strain of Corynebacterium doosanense
plasmid: pCdoos1
note: type strain of Corynebacterium doosanense

558173
type: Taxonomy
SIO_000068: taxonomy

CDOO_RS12990
type: Gene
subclass of: SO_0000704
RO_0002162: 558173
locus tag: CDOO_RS12990
old locus tag: CDOO_13260
so part of: sequence
location: complement(8..1099)
location: region:8-1099:-1
so has part: feature:8-1099:-1:exon
subclass of: SO_0000010

position:8:-1
position: 8
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1099:-1
position: 1099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8-1099:-1:exon

CDOO_RS12990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 558173
locus tag: CDOO_RS12990
old locus tag: CDOO_13260
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611781.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS3 family transposase
translation: MPCDAAIVRPDRPSERSCSISFALIFRTIGLLLPPCALYTRREERKRGGPRPHHEWPRRLRTRPQPAGPRTRDRWTPVKRIFSRVLKLSRQPYYRWLADPVTPNEVVEAYRANALFDAHKDDPEFGHRLLADEARDVGEPMADRTAWRITSSNGWWSVFGKKRAKNGKNPGPPAHDDLCAVVDEHGRTRHVFAATRANELWLVDITEHGTAEGKLYCCAIKDAFSRRIVGYSIDSRMKSRLAVQALENAVQMRGDVVGCVVHSDRGSQFRSRKFLRALAGHDMVGSMGRVGSSGDNAAMESFFSLLQKNVLDRGSWITREQLRIAIVTWIERTYHRRRRQARLGRLTPIEFEAIMTKDVALAA
SIO_010081: CDOO_RS12990
subclass of: SO_0000673
so part of: CDOO_RS12990
location: complement(8..1099)
location: region:8-1099:-1
so has part: feature:8-1099:-1:exon

WP_281175995.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8-1099:-1:exon

CDOO_RS12995
type: Gene
subclass of: SO_0000704
RO_0002162: 558173
gene: istA
locus tag: CDOO_RS12995
old locus tag: CDOO_13265
so part of: sequence
location: 1014..2576
location: region:1014-2576:1
so has part: feature:1014-2576:1:exon
subclass of: SO_0000010

position:1014:1
position: 1014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2576:1
position: 2576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1014-2576:1:exon

CDOO_RS12995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 558173
gene: istA
locus tag: CDOO_RS12995
old locus tag: CDOO_13265
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013350712.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS21 family transposase
translation: MVRKIRAKLILQLRSEGLSGRTIAASQGMSRKSITAVLEAADTAGVSWDDVAERPEDEVYDLLFPGRGQHHSVFAQPDWEKIHRELARVGVTLKLLHGEYTDECVATGAPAMGYDRFCRTYQRHVLVTGAASRVGHKAAQSVEVDWSGPTMTLLDPISSTPRPVYLFVGCLPFSRYSFVYPSLDMTQESWLRAHVAMFTAFGGSVPRIVPDNLKTGVITHPRDGEIVLNDAYREMAAHYSAAVLPGRVRKAKDKPSVENTVWHVAMRVIARLRDQQFTSLPELTAAVTAQVAAYNAEPFQKRDGSRASVFTTEEQPLLTGLPQVAYEISRWVYGRRVGRNGHVVWEKNFYSVPVTHIGTSVDLRITDRVLQIYSGQQRVSSHLLFPEGSANQYRTNDADLPAGERYQPWDAPRVREWAGRVGPSATVVVNRIFESVAVDEQGLNAALAVLRLTRRYSAERVEDACRLALAGHVRSPRYVHLHPILATGQDQATRQRPPREEPVEEGGFVRGADYYAGDVK
SIO_010081: CDOO_RS12995
subclass of: SO_0000673
so part of: CDOO_RS12995
location: 1014..2576
location: region:1014-2576:1
so has part: feature:1014-2576:1:exon

WP_038573144.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1014-2576:1:exon

CDOO_RS13000
type: Gene
subclass of: SO_0000704
RO_0002162: 558173
locus tag: CDOO_RS13000
old locus tag: CDOO_13270
so part of: sequence
location: 2573..3319
location: region:2573-3319:1
so has part: feature:2573-3319:1:exon
subclass of: SO_0000010

position:2573:1
position: 2573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3319:1
position: 3319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2573-3319:1:exon

CDOO_RS13000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 558173
locus tag: CDOO_RS13000
old locus tag: CDOO_13270
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018582399.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding protein
translation: MSGIDMETTRKLRDMGATALLEAIDAEDENLVLGMGFEERLHLIVDEAYATFTHGKVDGLIRRAGLRYPAADLRRIDLVEQRGLNRNLLATLATCGFIERHQNVVFQGFTGSGKSYLGCALAKQACQHRYRAHYIRMPDLEEAWATARDKPQGTTKFLKKYAAFTVLVIDEWLLDHPDEAMRSMLLELLERRYDSASTVFCTQYAKKDWHQRLGSGVHADAIMDRIVHNTIWVDTGTHNMREHVTMSQ
SIO_010081: CDOO_RS13000
subclass of: SO_0000673
so part of: CDOO_RS13000
location: 2573..3319
location: region:2573-3319:1
so has part: feature:2573-3319:1:exon

WP_018023087.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2573-3319:1:exon

CDOO_RS14215
type: Gene
subclass of: SO_0000704
RO_0002162: 558173
locus tag: CDOO_RS14215
old locus tag: CDOO_13275
pseudo: true
so part of: sequence
location: complement(<3431..3786)
location: region:3431-3786:-1
so has part: feature:3431-3786:-1:exon
subclass of: SO_0000010

position:3431:-1
position: 3431
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:3786:-1
position: 3786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3431-3786:-1:exon

CDOO_RS14215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 558173
locus tag: CDOO_RS14215
old locus tag: CDOO_13275
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611781.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: CDOO_RS14215
subclass of: SO_0000673
so part of: CDOO_RS14215
location: complement(<3431..3786)
location: region:3431-3786:-1
so has part: feature:3431-3786:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3431-3786:-1:exon

CDOO_RS13010
type: Gene
subclass of: SO_0000704
RO_0002162: 558173
locus tag: CDOO_RS13010
old locus tag: CDOO_13280
so part of: sequence
location: complement(4688..7933)
location: region:4688-7933:-1
so has part: feature:4688-7933:-1:exon
subclass of: SO_0000010

position:4688:-1
position: 4688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7933:-1
position: 7933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4688-7933:-1:exon

CDOO_RS13010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 558173
locus tag: CDOO_RS13010
old locus tag: CDOO_13280
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014301821.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0004519 - endonuclease activity [Evidence IEA]
GO process: GO:0006304 - DNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type I restriction endonuclease
translation: MNTANEYPFETAICLSLADSGYLYEDGVRDTDFDTELALYPTDVFHWLETQYPDEYAKVCPATDTAVATTAKQRALLTQLSKQLSKQPKRDHTRGGSIGGLLSVLRYGFTVLSDTHGKVTFPGMAEFPPANPLLTTVAERARANRFRVIRQVHFDTRAGNNETIDLVILLNGIPVATVELKTDNTQTIEDAIAQYKRDRVPSKHRPLLSPGRCLVHFAVSNSEVRMATVLAGTNTVFLPFNQGNGERAGNPPCADGSETSYLWRDVLTPASLLQIIQTYAMWQPTNSGGYLVFPRFHQRRAVEKVIGDIETKGQGGRYLIQHSAGSGKTKTIAWLAHRLIRHHTGEDKTFDSVIVISDRQVLDRNLAEEIALLPASRGMVVAVSNKGGAKSEQLGAALAEGGHIITCTVQTFPFVVAQAESMNLAERKWCVIVDEAHSSQHGNASQKLRELLATSTGMSPDEVDESGADDMDVAEEAHVAGVQVSVADQLNQKIAVADDAVARAGNVTFVAFTATPKAKTLRVFGTRTETGGFVAFDHYTMAQAIEEGFILDVLANYTTYSNYVRLAGDVERDETVDKSRVVGEIVRYAKQHPTNIAQKVAVVVNHFQTNVAHLLGGQARAMVVTDSRQSAFHWANEMTKYLAKHELADKFSALVAFSGSLEVDAPRRGKALPGMTTEEIAELDADYDRDLKAREGRFTADGTVTESSYNGVTDTETAFKAEDGSYRVLIVASKFQTGFNEPRLVAMYVDKKLSGVATVQTLSRLNRIHPGKGSPMVVDFANDADKVLADFQRFYTFASLPTDVDPTALLEVSERLDSAGIFTPADLDAVALAVEGDTDGSSGHEMLRALIAPMVTAWNDGIRQARLSGDDEEKQRLLAFRTDLRTYSKAWEFLSQIINFHDPDMRKRAILATYLFRNLRVGLVDIVDVSDVDIIGVAVAPDDKEKNLGLTQGDGELDVPVLGGGTTAATSAVGIAFNEAVDEANAILTAAGVPVSNQAARGFIMQLWGSLAPNDQVVKMAAENTATQLEHAPAFEDALLLALTEAMAASRDMHDLFLGDAVSMAKLKRALAQLVVRGKEQ
SIO_010081: CDOO_RS13010
subclass of: SO_0000673
so part of: CDOO_RS13010
location: complement(4688..7933)
location: region:4688-7933:-1
so has part: feature:4688-7933:-1:exon

WP_018022956.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4688-7933:-1:exon

CDOO_RS13015
type: Gene
subclass of: SO_0000704
RO_0002162: 558173
locus tag: CDOO_RS13015
old locus tag: CDOO_13285
so part of: sequence
location: complement(7946..8506)
location: region:7946-8506:-1
so has part: feature:7946-8506:-1:exon
subclass of: SO_0000010

position:7946:-1
position: 7946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8506:-1
position: 8506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7946-8506:-1:exon

CDOO_RS13015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 558173
locus tag: CDOO_RS13015
old locus tag: CDOO_13285
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTLLVAVVAALVAYGQLKAMREQTQSSIRPMMGALLKPGRYINEPIRVSINNFGQSIAYDVSLEFDPPLPEPNITKLNERGRLTRKGTKEGKEVTIHYRESPIALLNKFLLNQTVDTWPPYYEVGFDYWVARKDPDLGESAEGIPANTKLKINYRDRDNKWYSDDFALRPQLLAGINFHTDGTRTD
SIO_010081: CDOO_RS13015
subclass of: SO_0000673
so part of: CDOO_RS13015
location: complement(7946..8506)
location: region:7946-8506:-1
so has part: feature:7946-8506:-1:exon

WP_018022957.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7946-8506:-1:exon

CDOO_RS13735
type: Gene
subclass of: SO_0000704
RO_0002162: 558173
locus tag: CDOO_RS13735
so part of: sequence
location: complement(8567..9796)
location: region:8567-9796:-1
so has part: feature:8567-9796:-1:exon
subclass of: SO_0000010

position:8567:-1
position: 8567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9796:-1
position: 9796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8567-9796:-1:exon

CDOO_RS13735
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 558173
locus tag: CDOO_RS13735
inference: COORDINATES: protein motif:HMM:NF013579.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: restriction endonuclease subunit S
translation: MSNVSSVVHNELKRVFTTEWPVSRFGTHFFPSNERNGETPVGVPLSVSEHRGVVPRDNSDGGQQVSVDVSNYRVVRPGQLAANMMWLNFGGLGVSQHLGYISPAYMAFDLDEVIWPAFAHYLLRSRPYISAFAALGTGVRPNSQMVNFTLLSALPVPLPPLATQRAIADYLDRETGEIDAMLAKLEGLVGLLKERRKTQIINLLSHSSYSTKTARVGVVCDIIRRGMSPTYADDGVAVINQKCIRPGGWIDLQYIKYHSDRDKTPAPELFVQTGDILVCSTGDGTLGRSAIWRDAPAQVIFDSHVTIVRPFSSRVVPTYLAAVIAANESEFIRLSHGSTKQTELARDTVSETTLPLPPLDEQERIVAHLDESTARIDRMIAKAHQLRDLLTERRSALITAAVTGQIEIG
SIO_010081: CDOO_RS13735
subclass of: SO_0000673
so part of: CDOO_RS13735
location: complement(8567..9796)
location: region:8567-9796:-1
so has part: feature:8567-9796:-1:exon

WP_218916337.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8567-9796:-1:exon

CDOO_RS13025
type: Gene
subclass of: SO_0000704
RO_0002162: 558173
locus tag: CDOO_RS13025
old locus tag: CDOO_13295
so part of: sequence
location: complement(9793..11760)
location: region:9793-11760:-1
so has part: feature:9793-11760:-1:exon
subclass of: SO_0000010

position:9793:-1
position: 9793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11760:-1
position: 11760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9793-11760:-1:exon

CDOO_RS13025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 558173
locus tag: CDOO_RS13025
old locus tag: CDOO_13295
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014301824.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0008170 - N-methyltransferase activity [Evidence IEA]
GO process: GO:0006306 - DNA methylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type I restriction-modification system subunit M
translation: MSPTQEQITNARSAIADAVWNTADRYLRSVVEPEEYGDYIIPFAVLRRIECMLDSRKADFLDLYAGLKKQYDGVPDERIVSLHARTKLGLHFYNTSKLSLDAIAKTDDNVDEALNTYLGHFSPNLRDIWDSFKFTEKIATLARAQRLYGVVGHFAKLDMHPDNLPDTAMGDMFEDVMYRAFNTKGKSAGAFYTPRDAIALMVGVLFSSDDDGLAGDAPARTVYDPCAGTGGMLLVAKNELKELNRNIQVSLHGQELMEFAYGIGKADLIMQGNNPESIQFGNTLTNDRFEDQTFDYILTNPPYGSDWSDDYKVVATEATVEGSRFSHGLPAKSDGQMLFLSHVAHKLTPAHGETAGGRAGIVLNGSPLFTGAPESGPDSIRAWLLREDLVDAIVALPTSIFYGTGIATYIWILDTNKEPRRRGKIQLINGANTWSPMRKGMGDKRRELSPTDREVLIREYAEFQESELSKIVTADDLGFKDVPVYRQERFITVNSPEAVERVRAHKSFVDAHAGIMAEVDGAVWNKLPDLLKTKAKIKGVKMPVGLLSEIMQALAVHDDNAPAAIDHKGQPVSVAGWKMTERVPLTEDVDEHMAKEVVPFAPDVTWDVDKAKTGYEIPFTRLFYVPEEVRPLAEIDADVQRVMGELAEMFAEVKK
SIO_010081: CDOO_RS13025
subclass of: SO_0000673
so part of: CDOO_RS13025
location: complement(9793..11760)
location: region:9793-11760:-1
so has part: feature:9793-11760:-1:exon

WP_018022959.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9793-11760:-1:exon

CDOO_RS13030
type: Gene
subclass of: SO_0000704
RO_0002162: 558173
locus tag: CDOO_RS13030
old locus tag: CDOO_13300
so part of: sequence
location: complement(12147..12734)
location: region:12147-12734:-1
so has part: feature:12147-12734:-1:exon
subclass of: SO_0000010

position:12147:-1
position: 12147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12734:-1
position: 12734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12147-12734:-1:exon

CDOO_RS13030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 558173
locus tag: CDOO_RS13030
old locus tag: CDOO_13300
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015648284.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MSGQKVGYARVSSKDQNLERQIEQLKAEKVFTYYTDKASGGSRERPGLDEAMRYVRAGDQLVVTSMDRCARSLTDLYAIVDELVSKGVSVKFLKEGQIYSKDSTPIAKLMLGLLGSVAEFERSIIRERQAEGITRAKERGVYKGRARALTDEQVSQARAWVDAGVPKAEVARRLKVGRTTLYSYLGAAEGKSAQG
SIO_010081: CDOO_RS13030
subclass of: SO_0000673
so part of: CDOO_RS13030
location: complement(12147..12734)
location: region:12147-12734:-1
so has part: feature:12147-12734:-1:exon

WP_026159499.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12147-12734:-1:exon

CDOO_RS13035
type: Gene
subclass of: SO_0000704
RO_0002162: 558173
locus tag: CDOO_RS13035
old locus tag: CDOO_13305
so part of: sequence
location: complement(12865..13464)
location: region:12865-13464:-1
so has part: feature:12865-13464:-1:exon
subclass of: SO_0000010

position:12865:-1
position: 12865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13464:-1
position: 13464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12865-13464:-1:exon

CDOO_RS13035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 558173
locus tag: CDOO_RS13035
old locus tag: CDOO_13305
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013865273.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MRLLGYTRVSTVGQDPTLQHDALHTAGVQDRDVFSDVTSGAKNATERPGMKKLLAYAQPGDTVVVWRIDRLGRSLLDVLNTVNLLRERDVKIKSVSDGIDPETSSGRLMLGLLGTLAEYERELITERVNAGIAAAKAQGTRFGRPPVDPEVVDRKLAIVAEERAKGRSAEDAASMVGWSRATLYRHLQGAKRRLSAQPG
SIO_010081: CDOO_RS13035
subclass of: SO_0000673
so part of: CDOO_RS13035
location: complement(12865..13464)
location: region:12865-13464:-1
so has part: feature:12865-13464:-1:exon

WP_039746715.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12865-13464:-1:exon

CDOO_RS13740
type: Gene
subclass of: SO_0000704
RO_0002162: 558173
locus tag: CDOO_RS13740
old locus tag: CDOO_13310
so part of: sequence
location: 13696..14043
location: region:13696-14043:1
so has part: feature:13696-14043:1:exon
subclass of: SO_0000010

position:13696:1
position: 13696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14043:1
position: 14043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13696-14043:1:exon

CDOO_RS13740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 558173
locus tag: CDOO_RS13740
old locus tag: CDOO_13310
inference: COORDINATES: protein motif:HMM:NF015513.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PadR family transcriptional regulator
translation: MSETTSFGDWLRPALPLLLLRLLIDEPGHGYGLVEKLHAAGISARGTTVYPHLSKLQDAGYITSHWQTPETGPARKILTITDEGVDHYRHLQAQWSGVRDILTATVTAPNTTNPN
SIO_010081: CDOO_RS13740
subclass of: SO_0000673
so part of: CDOO_RS13740
location: 13696..14043
location: region:13696-14043:1
so has part: feature:13696-14043:1:exon

WP_081610405.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13696-14043:1:exon

CDOO_RS13045
type: Gene
subclass of: SO_0000704
RO_0002162: 558173
locus tag: CDOO_RS13045
old locus tag: CDOO_13315
so part of: sequence
location: 14057..14482
location: region:14057-14482:1
so has part: feature:14057-14482:1:exon
subclass of: SO_0000010

position:14057:1
position: 14057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14482:1
position: 14482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14057-14482:1:exon

CDOO_RS13045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 558173
locus tag: CDOO_RS13045
old locus tag: CDOO_13315
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSYHHDLAHQLRRRGCTEKAVADVLHTVDEAVTDTGNSPAEEFGSPEDYAAQFSGPRKRTPGQKALGVFGLFGVVCMVIYGIWPQWFGITTPVLEQFAGLIALLVLLAIGCIPGAYFDNRLPRAYKQQLQDSGVRSVESPD
SIO_010081: CDOO_RS13045
subclass of: SO_0000673
so part of: CDOO_RS13045
location: 14057..14482
location: region:14057-14482:1
so has part: feature:14057-14482:1:exon

WP_018022963.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14057-14482:1:exon

CDOO_RS13745
type: Gene
subclass of: SO_0000704
RO_0002162: 558173
locus tag: CDOO_RS13745
so part of: sequence
location: complement(14588..15115)
location: region:14588-15115:-1
so has part: feature:14588-15115:-1:exon
subclass of: SO_0000010

position:14588:-1
position: 14588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15115:-1
position: 15115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14588-15115:-1:exon

CDOO_RS13745
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 558173
locus tag: CDOO_RS13745
inference: COORDINATES: protein motif:HMM:NF024701.2
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TetR/AcrR family transcriptional regulator
translation: MATQLEQKLIAAGRDLLEARGIGAVTIREVARRCGVSHGAPRRHFPSLEELLAAIAEQYFHELRESMSEAGDRIVDTAKAYVEFAVQHPNAFELITRHDLLDGSGRELRSTSLSLLTDWQEQCQRQHPDSTPVHALSLWASIHGVAVLTSRRALDLVGADPYELVDEITRRSGVF
SIO_010081: CDOO_RS13745
subclass of: SO_0000673
so part of: CDOO_RS13745
location: complement(14588..15115)
location: region:14588-15115:-1
so has part: feature:14588-15115:-1:exon

WP_081610406.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14588-15115:-1:exon

CDOO_RS13050
type: Gene
subclass of: SO_0000704
RO_0002162: 558173
locus tag: CDOO_RS13050
old locus tag: CDOO_13320
so part of: sequence
location: 15382..16020
location: region:15382-16020:1
so has part: feature:15382-16020:1:exon
subclass of: SO_0000010

position:15382:1
position: 15382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16020:1
position: 16020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15382-16020:1:exon

CDOO_RS13050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 558173
locus tag: CDOO_RS13050
old locus tag: CDOO_13320
inference: COORDINATES: protein motif:HMM:NF013088.2
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: EamA family transporter
translation: MALHTLYAVVLQKVYAVSDLVLVYPVSRGLAPVMVTLISVPWIGLPGALPSIALPVVLVGVFLVGGISIRELARPRGVWAGMGVAVCTALYTLWDAYSIDVLNVNLTSYIALSSLAQFVLLTGLLFRRRGEFRAAVVASWRAAVPITLLVPASYLVILVAMNLAPPSMIATARTMNVVFGVIAAAWLLKEPLTARSICGVVLITLGSVMSAV
SIO_010081: CDOO_RS13050
subclass of: SO_0000673
so part of: CDOO_RS13050
location: 15382..16020
location: region:15382-16020:1
so has part: feature:15382-16020:1:exon

WP_211209015.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15382-16020:1:exon

CDOO_RS13055
type: Gene
subclass of: SO_0000704
RO_0002162: 558173
locus tag: CDOO_RS13055
old locus tag: CDOO_13325
so part of: sequence
location: complement(16291..17049)
location: region:16291-17049:-1
so has part: feature:16291-17049:-1:exon
subclass of: SO_0000010

position:16291:-1
position: 16291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17049:-1
position: 17049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16291-17049:-1:exon

CDOO_RS13055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 558173
locus tag: CDOO_RS13055
old locus tag: CDOO_13325
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018297236.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: YfbU family protein
translation: MKAITVRLPDDLRELLGYAAASRHQTQSDYLRGVIEAHLDQTHIGRPPRDNTGDITLTLVERQTLALAHLTLLASMGDLPPDRYDKDNSLRAVEVLERGYAGEYPQLFPQEEEGLSYHESKIVWDILDMFRVISSSVSHLGEGGWDQIPVLNAQHLGTFQGFDYQIDVEGKMAEYVDYLVRTSRWAEQQQAVDHGLNSHSQMLPTYLSMLAVFKPLWRNKVSHGTSRLTLSAKELADILLAAPGAERTGKKL
SIO_010081: CDOO_RS13055
subclass of: SO_0000673
so part of: CDOO_RS13055
location: complement(16291..17049)
location: region:16291-17049:-1
so has part: feature:16291-17049:-1:exon

WP_018022965.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16291-17049:-1:exon

CDOO_RS13060
type: Gene
subclass of: SO_0000704
RO_0002162: 558173
locus tag: CDOO_RS13060
old locus tag: CDOO_13330
so part of: sequence
location: complement(17323..18060)
location: region:17323-18060:-1
so has part: feature:17323-18060:-1:exon
subclass of: SO_0000010

position:17323:-1
position: 17323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18060:-1
position: 18060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17323-18060:-1:exon

CDOO_RS13060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 558173
locus tag: CDOO_RS13060
old locus tag: CDOO_13330
inference: COORDINATES: similar to AA sequence:RefSeq:WP_018020801.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTKVDNRQIIIDHLGAARIEPYLRSAKDNRKKSLALYNWSATMASAIHTDLGITEVLLRNAMDQKLQDWNDEQSHVHAGDSWLLYPPARPLQGLVHNFRTTAVDRAEKDADNRSPSHPRHGQGICHDDALANTTFGLWKHVLPNHKWDANPSNQDNQNRMRIWDEGLKKAFPYIDDPTGRDTYKRVSRLYGLRNRVSHMDSILGQDIGSLAEDAFALVGAIHPSLQEWLTSTSTVGQILKQRPEI
SIO_010081: CDOO_RS13060
subclass of: SO_0000673
so part of: CDOO_RS13060
location: complement(17323..18060)
location: region:17323-18060:-1
so has part: feature:17323-18060:-1:exon

WP_039746709.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17323-18060:-1:exon

CDOO_RS13065
type: Gene
subclass of: SO_0000704
RO_0002162: 558173
locus tag: CDOO_RS13065
old locus tag: CDOO_13335
so part of: sequence
location: 18239..18850
location: region:18239-18850:1
so has part: feature:18239-18850:1:exon
subclass of: SO_0000010

position:18239:1
position: 18239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18850:1
position: 18850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18239-18850:1:exon

CDOO_RS13065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 558173
locus tag: CDOO_RS13065
old locus tag: CDOO_13335
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015453125.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MVNVISVIQTKGGTGKTTTAMLLSSALTSLSHRVLVLDADKQRSAIDWSDDAGEGLGFEVKPVPTDRTLETALRRFRGDDYDFILVDTPPGSNAIVEIAAQEADLVLVPTGVSPLDMKRTQATLDSFIGTETPVAVVLVNVDKREKLLDLAQAQLTSHNRAALADTIIPTRSMTRRAGSTVPRIETKPFREWMELAEELTQAF
SIO_010081: CDOO_RS13065
subclass of: SO_0000673
so part of: CDOO_RS13065
location: 18239..18850
location: region:18239-18850:1
so has part: feature:18239-18850:1:exon

WP_155861395.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18239-18850:1:exon

CDOO_RS13070
type: Gene
subclass of: SO_0000704
RO_0002162: 558173
locus tag: CDOO_RS13070
old locus tag: CDOO_13340
so part of: sequence
location: 18862..19131
location: region:18862-19131:1
so has part: feature:18862-19131:1:exon
subclass of: SO_0000010

position:18862:1
position: 18862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19131:1
position: 19131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18862-19131:1:exon

CDOO_RS13070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 558173
locus tag: CDOO_RS13070
old locus tag: CDOO_13340
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015453126.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAIKGAAKKAQPHREKGTQSDVQAMRSEKVAKPAQRMAPLAGHGERSATVRLYVKDRELLKEAKMAALEDDTSLSQLWEEWAVEWLKKR
SIO_010081: CDOO_RS13070
subclass of: SO_0000673
so part of: CDOO_RS13070
location: 18862..19131
location: region:18862-19131:1
so has part: feature:18862-19131:1:exon

WP_018022969.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18862-19131:1:exon

CDOO_RS13075
type: Gene
subclass of: SO_0000704
RO_0002162: 558173
locus tag: CDOO_RS13075
old locus tag: CDOO_13345
so part of: sequence
location: 19386..20849
location: region:19386-20849:1
so has part: feature:19386-20849:1:exon
subclass of: SO_0000010

position:19386:1
position: 19386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20849:1
position: 20849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19386-20849:1:exon

CDOO_RS13075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 558173
locus tag: CDOO_RS13075
old locus tag: CDOO_13345
inference: COORDINATES: protein motif:HMM:NF015076.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication initiation protein
translation: MTIAHTRDEWDQPTRISTALGLFTREQLGGLQDTPAGATDRDALLSHLGRDVLHVSKDRSFSRAYRRAKDGSTVPLMWRTDSEGLGKFQYAMLTNKQYAAVLVVDIDQPGERGGHPVNLAETTRAQLAGLVSRNVGPAWVGINRVSGKAQCLWLIDPVYADEGGESANMSLLAATTRKLGEYLDHDPNFSHRFSRSPFYTGHSPDRYIWYRQHHRIDRLGDLMKEVRTVAGDAQREPARQEYASGRELIEAVKARREEAQAFRAIAREIETEMGEDADRLNPDLIDGVNVRWVGDGRAARDETAFRHALKTAHRLRAAGQRMTDAAIIDAYEHAYAVAHREGGAGREPELPPMRDRQSMARRVRGYVSQGKTASYGSPTAKYATTSQRKALATMGRRGGQKSAQRWERDPEGEYAERRREALRQTHRRKRVMGQTTRAKIQALVGQAYVETGCTPSAREIAQEIGVTKRTVNLHLKALREAGALAVE
SIO_010081: CDOO_RS13075
subclass of: SO_0000673
so part of: CDOO_RS13075
location: 19386..20849
location: region:19386-20849:1
so has part: feature:19386-20849:1:exon

WP_018022970.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19386-20849:1:exon

CDOO_RS13080
type: Gene
subclass of: SO_0000704
RO_0002162: 558173
locus tag: CDOO_RS13080
old locus tag: CDOO_13350
so part of: sequence
location: 21615..21806
location: region:21615-21806:1
so has part: feature:21615-21806:1:exon
subclass of: SO_0000010

position:21615:1
position: 21615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21806:1
position: 21806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21615-21806:1:exon

CDOO_RS13080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 558173
locus tag: CDOO_RS13080
old locus tag: CDOO_13350
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAELSPYALAVYKTLTDGTPAGGESIEDVRRRYEPIYECEARGRDASLARVLPDDEDAFGLPW
SIO_010081: CDOO_RS13080
subclass of: SO_0000673
so part of: CDOO_RS13080
location: 21615..21806
location: region:21615-21806:1
so has part: feature:21615-21806:1:exon

WP_018022971.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21615-21806:1:exon

CDOO_RS13085
type: Gene
subclass of: SO_0000704
RO_0002162: 558173
gene: mobF
locus tag: CDOO_RS13085
old locus tag: CDOO_13355
so part of: sequence
location: complement(22012..25605)
location: region:22012-25605:-1
so has part: feature:22012-25605:-1:exon
subclass of: SO_0000010

position:22012:-1
position: 22012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25605:-1
position: 25605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22012-25605:-1:exon

CDOO_RS13085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 558173
gene: mobF
locus tag: CDOO_RS13085
old locus tag: CDOO_13355
inference: COORDINATES: protein motif:HMM:NF041492.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MobF family relaxase
translation: MMSFRAVHAGSGYQYLLRSVATNDAYDPTVETGKLSGYYQAKGTPPGRWIGSGLTALVTTQRGQEVEADQMEALYGVGLHPDAHTMIEGGASFEDCRLGGKFPVFTNSIPVLDALRAAEKSAVAETGRLLTDAERSQLAASVGASFYRAAEGVDYAPDKDVIDWVNQQQAQVKQAVAGFDLTFSPAKSISVLWALSDEDTASRIAACHHEAVAEVLSWAETNVVRTRMGAGGLAQVETNGIVASEFTHFDTRAGDPDLHSHVLVANKVQGPDGKWRTLDSRAMFKNHQTLSARYDMVVQEILTRKMGLAFEASAREQGKEPVWEVAGVPQKLIDAFSTRRTLARPVFEKLREEFVASHGHQPDKRAQLRLWQAAILDTREAKKPAESLATLRADWRADVEHLDGGDELLARVQSLTSGAELDERPAFFADDVSTSQRLDDVSLAVIDRVIQKRSYFARHHVTAGVGAYLKGFRFSDADEAARVFDAVCENIITHHLVDLTAEEPLAVPRALRRANGETLDRGMDFAQFTTARLLAQEDYVLRAVTEPVAVFARDKTIAQALVAAKESSGFALNTGQEALARQLLQAGTVISSGVGPAGTGKTTAMTLVADVWKAEQRQVIGLAPSAAAATVLSDEVGIDAHTIDSLAFVWRGRNPNKPAGDPAALPVDLRPGDMLLVDEAGMATTDNLAALAEIAQATGAVVRLIGDPQQLDAVGSGGLFATMCRYGDATELTDVMRFSHGNDTEQAEASLRLRRGEVEAVDFYNRRGWVRGGTRNDMLSAAVDAYLADVERGKRSLIVASTNADVALINEAIRSYRVERGLVEDTDTVALSRGEVAGVGDLIIARKNERLVAEDGTPGRKVTNGQLLHVRGVHATGGLDVEDEASGQRFVLPADYVRSSTHLGYGSTVHRAQGATVETTHAVIDAQTSRTGLYVALTRGKQENRVYAVTDDALDEFAEAAHEHMAGNIGGLSAEAVMRAAIARDQRQLSARDMAEKAREYAGSDDRVSKLYAYGVDKAYQRFIDHNLDGWWDMLDPDAAQALTDEGRQKVRSAWVESLRAGIDPRDLMNSATFNLGEVEEPGAVIAWRLREQVSAVATPGRGLAAVPPLTRTSDRELHQWLVRTRERFESAAAEPAPRQSAAQQQSGDALRDMVTADLGSALQRQRAQQRTTPADSRKPTAASTQERVRPGNENDL
SIO_010081: CDOO_RS13085
subclass of: SO_0000673
so part of: CDOO_RS13085
location: complement(22012..25605)
location: region:22012-25605:-1
so has part: feature:22012-25605:-1:exon

WP_018023055.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22012-25605:-1:exon

CDOO_RS13090
type: Gene
subclass of: SO_0000704
RO_0002162: 558173
locus tag: CDOO_RS13090
old locus tag: CDOO_13360
so part of: sequence
location: complement(25784..25969)
location: region:25784-25969:-1
so has part: feature:25784-25969:-1:exon
subclass of: SO_0000010

position:25784:-1
position: 25784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25969:-1
position: 25969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25784-25969:-1:exon

CDOO_RS13090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 558173
locus tag: CDOO_RS13090
old locus tag: CDOO_13360
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLELGWGKAEGLANPRAALTEFYELPGRSDKVPLHIVQVGLGDEHVLGGGGDPLLLLPIFN
SIO_010081: CDOO_RS13090
subclass of: SO_0000673
so part of: CDOO_RS13090
location: complement(25784..25969)
location: region:25784-25969:-1
so has part: feature:25784-25969:-1:exon

WP_018023054.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25784-25969:-1:exon

CDOO_RS13095
type: Gene
subclass of: SO_0000704
RO_0002162: 558173
locus tag: CDOO_RS13095
old locus tag: CDOO_13370
so part of: sequence
location: 26113..26427
location: region:26113-26427:1
so has part: feature:26113-26427:1:exon
subclass of: SO_0000010

position:26113:1
position: 26113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26427:1
position: 26427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26113-26427:1:exon

CDOO_RS13095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 558173
locus tag: CDOO_RS13095
old locus tag: CDOO_13370
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLSPVTVRAVHKELGRPTDDATIATVREQFAEEVGSRIDLYATQLVNEWKAANPGGDGFIPGEVMGSSHGQALRRAEEEVMEEWFNGPIRTLMERKVARGIDGW
SIO_010081: CDOO_RS13095
subclass of: SO_0000673
so part of: CDOO_RS13095
location: 26113..26427
location: region:26113-26427:1
so has part: feature:26113-26427:1:exon

WP_018023052.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26113-26427:1:exon

CDOO_RS13100
type: Gene
subclass of: SO_0000704
RO_0002162: 558173
locus tag: CDOO_RS13100
old locus tag: CDOO_13375
so part of: sequence
location: 26583..26999
location: region:26583-26999:1
so has part: feature:26583-26999:1:exon
subclass of: SO_0000010

position:26583:1
position: 26583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26999:1
position: 26999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26583-26999:1:exon

CDOO_RS13100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 558173
locus tag: CDOO_RS13100
old locus tag: CDOO_13375
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLAEELASPVESSTPVEEAEPRLALSIDDLGGDPRSIPNDQRVRLIEHARELSNVDLLRAYYEASDALTRAEEREESCSPVIADQYLRKTFGLALIELKHLLTLPMAEGTAAAPNMATGDNDTPERDEQHHDNVHHEN
SIO_010081: CDOO_RS13100
subclass of: SO_0000673
so part of: CDOO_RS13100
location: 26583..26999
location: region:26583-26999:1
so has part: feature:26583-26999:1:exon

WP_018023051.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26583-26999:1:exon

CDOO_RS14045
type: Gene
subclass of: SO_0000704
RO_0002162: 558173
locus tag: CDOO_RS14045
so part of: sequence
location: 27024..27194
location: region:27024-27194:1
so has part: feature:27024-27194:1:exon
subclass of: SO_0000010

position:27024:1
position: 27024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27194:1
position: 27194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27024-27194:1:exon

CDOO_RS14045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 558173
locus tag: CDOO_RS14045
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLSPVTSRAAYEELGKPADDATVESVIEQYEEEVGTRTDVYFTQFVNEWRVCCTFR
SIO_010081: CDOO_RS14045
subclass of: SO_0000673
so part of: CDOO_RS14045
location: 27024..27194
location: region:27024-27194:1
so has part: feature:27024-27194:1:exon

WP_018023050.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27024-27194:1:exon