Cuculus canorus isolate bCucCan1 chromosome 30, bCucCan1.pri, whole genome shotgun sequence.
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Cuculiformes; Cuculidae; Cuculus.
REFSEQ INFORMATION: The reference sequence is identical to\nCM030666.1.\nAssembly name: bCucCan1.pri\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2021/04/15. The original whole-genome shotgun project has the\naccession JAGIYT000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 30-MAR-2021\nAssembly Method :: FALCON v. DX 2.0.2; FALCON-Unzip v. DX\n 8.0.1; purge_dups v. DX 19-08-10;\n scaff10X v. DX 2.0.3; bionano Solve v. DX\n 3.4.0; Salsa2 HiC v. DX 2.2.0; pbalign v.\n 0.3.2; pbgcpp v. 1.9.0; Longranger Align\n v. DX 2.2.2.1; freebayes v. DX 19-07-11;\n gEVAL manual curation v. 2021-03-30; VGP\n assembly pipeline v. 1.5\nAssembly Name :: bCucCan1.pri\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 64.31x\nSequencing Technology :: PacBio Sequel II CLR; Illumina NovaSeq;\n Arima Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Status :: Full annotation\nAnnotation Name :: GCF_017976375.1-RS_2023_02\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 10.1\nAnnotation Method :: Best-placed RefSeq; Gnomon;\n cmsearch; tRNAscan-SE\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\nAnnotation Date :: 02/28/2023\n##Genome-Annotation-Data-END##
GEM interacting protein; Derived by automated computational analysis using gene prediction method: Gnomon.
GEM interacting protein, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins
GEM interacting protein, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon.
GEM interacting protein, transcript variant X2
lysophosphatidic acid receptor 2; Derived by automated computational analysis using gene prediction method: Gnomon.
lysophosphatidic acid receptor 2, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins
lysophosphatidic acid receptor 2, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins
PBX homeobox 4; Derived by automated computational analysis using gene prediction method: Gnomon.
pre-B-cell leukemia transcription factor 4
DSN1 component of MIS12 kinetochore complex; Derived by automated computational analysis using gene prediction method: Gnomon.
DSN1 component of MIS12 kinetochore complex
multivesicular body subunit 12A; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
ATPase 13A1; Derived by automated computational analysis using gene prediction method: Gnomon.
endoplasmic reticulum transmembrane helix translocase
coiled-coil-helix-coiled-coil-helix domain containing 5; Derived by automated computational analysis using gene prediction method: Gnomon.
coiled-coil-helix-coiled-coil-helix domain containing 5
COORDINATES: polyA evidence [ECO:0006239]
coiled-coil-helix-coiled-coil-helix domain-containing protein 5
LIM homeobox transcription factor 1-alpha-like; Derived by automated computational analysis using gene prediction method: Gnomon.
LIM homeobox transcription factor 1-alpha-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
hepatic lectin-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
F-box and leucine rich repeat protein 12; Derived by automated computational analysis using gene prediction method: Gnomon.
F-box and leucine rich repeat protein 12, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
F-box and leucine rich repeat protein 12, transcript variant X2
ubiquitin like 5; Derived by automated computational analysis using gene prediction method: Gnomon.
peptidylprolyl cis/trans isomerase, NIMA-interacting 1; Derived by automated computational analysis using gene prediction method: Gnomon.
peptidylprolyl cis/trans isomerase, NIMA-interacting 1
peptidyl-prolyl cis-trans isomerase NIMA-interacting 1
microtubule-associated proteins 1A/1B light chain 3C; Derived by automated computational analysis using gene prediction method: Gnomon.
microtubule-associated proteins 1A/1B light chain 3C
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
olfactomedin 2; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 Proteins
uncharacterized LOC128849571; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128849571, transcript variant X2
uncharacterized LOC128849571, transcript variant X1
collagen type V alpha 3 chain; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 48 Proteins
retinol dehydrogenase 8; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins
peter pan homolog; Derived by automated computational analysis using gene prediction method: Gnomon.
peter pan homolog, transcript variant X1
peter pan homolog, transcript variant X2
purinergic receptor P2Y11; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
eukaryotic translation initiation factor 3 subunit G; Derived by automated computational analysis using gene prediction method: Gnomon.
eukaryotic translation initiation factor 3 subunit G
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins
bromodomain containing 4; Derived by automated computational analysis using gene prediction method: Gnomon.
bromodomain containing 4, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
bromodomain containing 4, transcript variant X2
bromodomain containing 4, transcript variant X4
bromodomain containing 4, transcript variant X6
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
bromodomain containing 4, transcript variant X1
bromodomain containing 4, transcript variant X5
bromodomain-containing protein 4 isoform X2
bromodomain-containing protein 4 isoform X1
A-kinase anchoring protein 8; Derived by automated computational analysis using gene prediction method: Gnomon.
A-kinase anchoring protein 8, transcript variant X1
A-kinase anchoring protein 8, transcript variant X3
A-kinase anchoring protein 8, transcript variant X2
A-kinase anchoring protein 8, transcript variant X4
A-kinase anchoring protein 8 like; Derived by automated computational analysis using gene prediction method: Gnomon.
A-kinase anchoring protein 8 like, transcript variant X2
A-kinase anchoring protein 8 like, transcript variant X1
A-kinase anchor protein 8-like isoform X1
A-kinase anchor protein 8-like isoform X2
WIZ zinc finger; Derived by automated computational analysis using gene prediction method: Gnomon.
RAS protein activator like 3; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins
peptidoglycan recognition protein 2; Derived by automated computational analysis using gene prediction method: Gnomon.
erythropoietin receptor; Derived by automated computational analysis using gene prediction method: Gnomon.
mucolipin TRP cation channel 1; Derived by automated computational analysis using gene prediction method: Gnomon.
mucolipin TRP cation channel 1, transcript variant X1
mucolipin TRP cation channel 1, transcript variant X2
patatin like phospholipase domain containing 6; Derived by automated computational analysis using gene prediction method: Gnomon.
patatin like phospholipase domain containing 6, transcript variant X6
patatin like phospholipase domain containing 6, transcript variant X2
patatin like phospholipase domain containing 6, transcript variant X1
patatin like phospholipase domain containing 6, transcript variant X4
patatin like phospholipase domain containing 6, transcript variant X3
patatin like phospholipase domain containing 6, transcript variant X5
patatin-like phospholipase domain-containing protein 6 isoform X6
patatin-like phospholipase domain-containing protein 6 isoform X2
patatin-like phospholipase domain-containing protein 6 isoform X1
patatin-like phospholipase domain-containing protein 6 isoform X4
patatin-like phospholipase domain-containing protein 6 isoform X3
patatin-like phospholipase domain-containing protein 6 isoform X5
macrophage mannose receptor 1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
synapse defective Rho GTPase homolog 1; Derived by automated computational analysis using gene prediction method: Gnomon.
synapse defective Rho GTPase homolog 1, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins
synapse defective Rho GTPase homolog 1, transcript variant X2
rho GTPase-activating protein SYDE1 isoform X1
rho GTPase-activating protein SYDE1 isoform X2
ilvB acetolactate synthase like; Derived by automated computational analysis using gene prediction method: Gnomon.
ilvB acetolactate synthase like, transcript variant X6
ilvB acetolactate synthase like, transcript variant X1
ilvB acetolactate synthase like, transcript variant X2
ilvB acetolactate synthase like, transcript variant X4
ilvB acetolactate synthase like, transcript variant X3
ilvB acetolactate synthase like, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
germ cell nuclear acidic protein-like; Derived by automated computational analysis using gene prediction method: Gnomon.
complement C3; Derived by automated computational analysis using gene prediction method: Gnomon.
vav guanine nucleotide exchange factor 1; Derived by automated computational analysis using gene prediction method: Gnomon.
vav guanine nucleotide exchange factor 1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins
putative adhesion G protein-coupled receptor E4P; Derived by automated computational analysis using gene prediction method: Gnomon.
putative adhesion G protein-coupled receptor E4P, transcript variant X2
putative adhesion G protein-coupled receptor E4P, transcript variant X1
putative adhesion G protein-coupled receptor E4P
C-type lectin domain family 17, member A; Derived by automated computational analysis using gene prediction method: Gnomon.
C-type lectin domain family 17, member A
asialoglycoprotein receptor 1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
asialoglycoprotein receptor 1-like, transcript variant X2
asialoglycoprotein receptor 1-like, transcript variant X1
asialoglycoprotein receptor 1-like isoform X2
asialoglycoprotein receptor 1-like isoform X1
ecotropic viral integration site 5 like; Derived by automated computational analysis using gene prediction method: Gnomon.
ecotropic viral integration site 5 like, transcript variant X1
ecotropic viral integration site 5 like, transcript variant X2
ecotropic viral integration site 5 like, transcript variant X7
ecotropic viral integration site 5 like, transcript variant X5
ecotropic viral integration site 5 like, transcript variant X6
ecotropic viral integration site 5 like, transcript variant X10
ecotropic viral integration site 5 like, transcript variant X8
ecotropic viral integration site 5 like, transcript variant X9
ecotropic viral integration site 5 like, transcript variant X4
ecotropic viral integration site 5 like, transcript variant X3
adhesion G protein-coupled receptor L1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
adhesion G protein-coupled receptor L1-like
adhesion G protein-coupled receptor E5-like; Derived by automated computational analysis using gene prediction method: Gnomon.
adhesion G protein-coupled receptor E5-like
phospholipid phosphatase related 2; Derived by automated computational analysis using gene prediction method: Gnomon.
phospholipid phosphatase-related protein type 2
SWIM-type zinc finger 7 associated protein 1; Derived by automated computational analysis using gene prediction method: Gnomon.
SWIM-type zinc finger 7 associated protein 1
ultra-long-chain fatty acid omega-hydroxylase-like; Derived by automated computational analysis using gene prediction method: Gnomon.
ultra-long-chain fatty acid omega-hydroxylase-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 42 Proteins
ultra-long-chain fatty acid omega-hydroxylase-like isoform X1
ultra-long-chain fatty acid omega-hydroxylase-like, transcript variant X2
ultra-long-chain fatty acid omega-hydroxylase-like isoform X2
ultra-long-chain fatty acid omega-hydroxylase-like, transcript variant X3
ferredoxin 2; Derived by automated computational analysis using gene prediction method: Gnomon.
basement membrane-specific heparan sulfate proteoglycan core protein-like; Derived by automated computational analysis using gene prediction method: Gnomon.
basement membrane-specific heparan sulfate proteoglycan core protein-like
intercellular adhesion molecule 5-like; Derived by automated computational analysis using gene prediction method: Gnomon.
mitochondrial ribosomal protein L4; Derived by automated computational analysis using gene prediction method: Gnomon.
sphingosine 1-phosphate receptor 2; Derived by automated computational analysis using gene prediction method: Gnomon.
sphingosine 1-phosphate receptor 2, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 Proteins
sphingosine 1-phosphate receptor 2, transcript variant X3
sphingosine 1-phosphate receptor 2, transcript variant X4
sphingosine 1-phosphate receptor 2, transcript variant X2
uncharacterized LOC104068072; Derived by automated computational analysis using gene prediction method: Gnomon.
nucleoredoxin like 1; Derived by automated computational analysis using gene prediction method: Gnomon.
nucleoredoxin like 1, transcript variant X2
nucleoredoxin like 1, transcript variant X3
solute carrier family 27 member 1; Derived by automated computational analysis using gene prediction method: Gnomon.
solute carrier family 27 member 1, transcript variant X2
solute carrier family 27 member 1, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins
long-chain fatty acid transport protein 1 isoform X2
long-chain fatty acid transport protein 1 isoform X1
nucleoredoxin like 1, transcript variant X1
autophagy related 4D cysteine peptidase; Derived by automated computational analysis using gene prediction method: Gnomon.
KRI1 homolog; Derived by automated computational analysis using gene prediction method: Gnomon.
adaptor related protein complex 1 subunit mu 2; Derived by automated computational analysis using gene prediction method: Gnomon.
adaptor related protein complex 1 subunit mu 2, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins
adaptor related protein complex 1 subunit mu 2, transcript variant X1
solute carrier family 44 member 2; Derived by automated computational analysis using gene prediction method: Gnomon.
solute carrier family 44 member 2, transcript variant X2
solute carrier family 44 member 2, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins
choline transporter-like protein 2 isoform X2
choline transporter-like protein 2 isoform X1
interleukin enhancer binding factor 3; Derived by automated computational analysis using gene prediction method: Gnomon.
interleukin enhancer binding factor 3, transcript variant X1
interleukin enhancer binding factor 3, transcript variant X2
interleukin enhancer binding factor 3, transcript variant X5
interleukin enhancer binding factor 3, transcript variant X3
interleukin enhancer binding factor 3, transcript variant X4
interleukin enhancer-binding factor 3 isoform X1
interleukin enhancer-binding factor 3 isoform X2
interleukin enhancer-binding factor 3 isoform X5
interleukin enhancer-binding factor 3 isoform X3
interleukin enhancer-binding factor 3 isoform X4
beta-1,3-galactosyltransferase 2-like; Derived by automated computational analysis using gene prediction method: Gnomon.
beta-1,3-galactosyltransferase 2-like, transcript variant X2
beta-1,3-galactosyltransferase 2-like, transcript variant X1
queuine tRNA-ribosyltransferase catalytic subunit 1; Derived by automated computational analysis using gene prediction method: Gnomon.
queuine tRNA-ribosyltransferase catalytic subunit 1, transcript variant X1
queuine tRNA-ribosyltransferase catalytic subunit 1, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins
queuine tRNA-ribosyltransferase catalytic subunit 1 isoform X2
queuine tRNA-ribosyltransferase catalytic subunit 1 isoform X1
queuine tRNA-ribosyltransferase catalytic subunit 1, transcript variant X3
dynamin 2; Derived by automated computational analysis using gene prediction method: Gnomon.
bestrophin 2; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins
guided entry of tail-anchored proteins factor 3, ATPase; Derived by automated computational analysis using gene prediction method: Gnomon.
guided entry of tail-anchored proteins factor 3, ATPase
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins
telomerase RNA component interacting RNase; Derived by automated computational analysis using gene prediction method: Gnomon.
telomerase RNA component interacting RNase
transportin 2; Derived by automated computational analysis using gene prediction method: Gnomon.
small nucleolar RNA SNORD41; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:14.6:RF00588
Derived by automated computational analysis using gene prediction method: cmsearch.
F-box and WD repeat domain containing 9; Derived by automated computational analysis using gene prediction method: Gnomon.
deoxyhypusine synthase; Derived by automated computational analysis using gene prediction method: Gnomon.
WD repeat domain 83; Derived by automated computational analysis using gene prediction method: Gnomon.
WD repeat domain 83 opposite strand; Derived by automated computational analysis using gene prediction method: Gnomon.
ribonuclease H2 subunit A; Derived by automated computational analysis using gene prediction method: Gnomon.
microtubule associated serine/threonine kinase 1; Derived by automated computational analysis using gene prediction method: Gnomon.
microtubule associated serine/threonine kinase 1
microtubule-associated serine/threonine-protein kinase 1
glutaryl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Gnomon.
glutaryl-CoA dehydrogenase, mitochondrial
synaptonemal complex central element protein 2; Derived by automated computational analysis using gene prediction method: Gnomon.
synaptonemal complex central element protein 2
phenylalanyl-tRNA synthetase subunit alpha; Derived by automated computational analysis using gene prediction method: Gnomon.
phenylalanyl-tRNA synthetase subunit alpha
phenylalanine--tRNA ligase alpha subunit
calreticulin; Derived by automated computational analysis using gene prediction method: Gnomon.
RAD23 homolog A, nucleotide excision repair protein; Derived by automated computational analysis using gene prediction method: Gnomon.
RAD23 homolog A, nucleotide excision repair protein
UV excision repair protein RAD23 homolog A
GADD45G interacting protein 1; Derived by automated computational analysis using gene prediction method: Gnomon.
growth arrest and DNA damage-inducible proteins-interacting protein 1
nuclear factor I X; Derived by automated computational analysis using gene prediction method: Gnomon.
nuclear factor I X, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 Proteins
nuclear factor I X, transcript variant X1
nuclear factor I X, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 40 Proteins
nuclear factor I X, transcript variant X5
nuclear factor I X, transcript variant X7
nuclear factor I X, transcript variant X6
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 49 Proteins
nuclear factor I X, transcript variant X3
acid phosphatase 5, tartrate resistant; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: tartrate-resistant acid phosphatase type 5
elongation factor 1; Derived by automated computational analysis using gene prediction method: Gnomon.
transcription elongation factor 1 homolog
calponin 1; Derived by automated computational analysis using gene prediction method: Gnomon.
ECSIT signaling integrator; Derived by automated computational analysis using gene prediction method: Gnomon.
evolutionarily conserved signaling intermediate in Toll pathway, mitochondrial
zinc finger protein 653; Derived by automated computational analysis using gene prediction method: Gnomon.
ELAV like RNA binding protein 3; Derived by automated computational analysis using gene prediction method: Gnomon.
ELAV like RNA binding protein 3, transcript variant X2
ELAV like RNA binding protein 3, transcript variant X4
ELAV like RNA binding protein 3, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins
ELAV like RNA binding protein 3, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 Proteins
ELAV like RNA binding protein 3, transcript variant X5
maltase-glucoamylase; Derived by automated computational analysis using gene prediction method: Gnomon.
sodium/glucose cotransporter 2-like; Derived by automated computational analysis using gene prediction method: Gnomon.
sodium/glucose cotransporter 2-like, transcript variant X3
sodium/glucose cotransporter 2-like, transcript variant X2
sodium/glucose cotransporter 2-like, transcript variant X1
sodium/glucose cotransporter 2-like, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins
sodium/glucose cotransporter 2-like isoform X3
sodium/glucose cotransporter 2-like isoform X2
sodium/glucose cotransporter 2-like isoform X1
sodium/glucose cotransporter 2-like isoform X4
6-phosphogluconolactonase; Derived by automated computational analysis using gene prediction method: Gnomon.
6-phosphogluconolactonase, transcript variant X3
6-phosphogluconolactonase, transcript variant X2
6-phosphogluconolactonase, transcript variant X1
collagen beta(1-O)galactosyltransferase 1; Derived by automated computational analysis using gene prediction method: Gnomon.
collagen beta(1-O)galactosyltransferase 1
protein kinase C substrate 80K-H; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins
LOW QUALITY PROTEIN: glucosidase 2 subunit beta
kelch like ECH associated protein 1; Derived by automated computational analysis using gene prediction method: Gnomon.
SPC24 component of NDC80 kinetochore complex; Derived by automated computational analysis using gene prediction method: Gnomon.
SPC24 component of NDC80 kinetochore complex
cAMP-specific 3',5'-cyclic phosphodiesterase 4A; Derived by automated computational analysis using gene prediction method: Gnomon.
cAMP-specific 3',5'-cyclic phosphodiesterase 4A
uncharacterized LOC128849530; Derived by automated computational analysis using gene prediction method: Gnomon.
cell division cycle 37, HSP90 cochaperone; Derived by automated computational analysis using gene prediction method: Gnomon.
cell division cycle 37, HSP90 cochaperone
transmembrane p24 trafficking protein 1; Derived by automated computational analysis using gene prediction method: Gnomon.
transmembrane emp24 domain-containing protein 1
chromosome 30 C19orf38 homolog; Derived by automated computational analysis using gene prediction method: Gnomon.
coactivator associated arginine methyltransferase 1; Derived by automated computational analysis using gene prediction method: Gnomon.
coactivator associated arginine methyltransferase 1
histone-arginine methyltransferase CARM1
translocase of inner mitochondrial membrane 29; Derived by automated computational analysis using gene prediction method: Gnomon.
translocase of inner mitochondrial membrane 29
mitochondrial import inner membrane translocase subunit Tim29
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4; Derived by automated computational analysis using gene prediction method: Gnomon.
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, transcript variant X1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, transcript variant X2
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, transcript variant X3
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, transcript variant X5
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, transcript variant X6
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, transcript variant X7
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, transcript variant X8
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, transcript variant X9
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, transcript variant X10
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, transcript variant X11
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, transcript variant X12
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, transcript variant X13
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, transcript variant X4
transcription activator BRG1 isoform X10
transcription activator BRG1 isoform X11
transcription activator BRG1 isoform X12
transcription activator BRG1 isoform X13
low density lipoprotein receptor; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 41 Proteins
KH-type splicing regulatory protein; Derived by automated computational analysis using gene prediction method: Gnomon.
general transcription factor IIF subunit 1; Derived by automated computational analysis using gene prediction method: Gnomon.
general transcription factor IIF subunit 1, transcript variant X2
general transcription factor IIF subunit 1, transcript variant X1
general transcription factor IIF subunit 1
persephin; Derived by automated computational analysis using gene prediction method: Gnomon.
alkB homolog 7; Derived by automated computational analysis using gene prediction method: Gnomon.
alpha-ketoglutarate-dependent dioxygenase alkB homolog 7, mitochondrial
caseinolytic mitochondrial matrix peptidase proteolytic subunit; Derived by automated computational analysis using gene prediction method: Gnomon.
caseinolytic mitochondrial matrix peptidase proteolytic subunit
ATP-dependent Clp protease proteolytic subunit, mitochondrial
regulatory factor X1; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
LOW QUALITY PROTEIN: MHC class II regulatory factor RFX1
DDB1 and CUL4 associated factor 15; Derived by automated computational analysis using gene prediction method: Gnomon.
coiled-coil and C2 domain containing 1A; Derived by automated computational analysis using gene prediction method: Gnomon.
coiled-coil and C2 domain containing 1A, transcript variant X2
coiled-coil and C2 domain containing 1A, transcript variant X1
coiled-coil and C2 domain containing 1A, transcript variant X4
coiled-coil and C2 domain containing 1A, transcript variant X3
coiled-coil and C2 domain-containing protein 1A isoform X2
coiled-coil and C2 domain-containing protein 1A isoform X1
break repair meiotic recombinase recruitment factor 1; Derived by automated computational analysis using gene prediction method: Gnomon.
break repair meiotic recombinase recruitment factor 1
nanos C2HC-type zinc finger 3; Derived by automated computational analysis using gene prediction method: Gnomon.
chromosome 30 C19orf53 homolog; Derived by automated computational analysis using gene prediction method: Gnomon.
leydig cell tumor 10 kDa protein homolog
methylthioribose-1-phosphate isomerase 1; Derived by automated computational analysis using gene prediction method: Gnomon.
methylthioribose-1-phosphate isomerase 1
YJU2 splicing factor homolog B; Derived by automated computational analysis using gene prediction method: Gnomon.
calcium voltage-gated channel subunit alpha1 A; Derived by automated computational analysis using gene prediction method: Gnomon.
calcium voltage-gated channel subunit alpha1 A
voltage-dependent P/Q-type calcium channel subunit alpha-1A
nucleus accumbens associated 1; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
LOW QUALITY PROTEIN: nucleus accumbens-associated protein 1
tRNA methyltransferase 1; Derived by automated computational analysis using gene prediction method: Gnomon.
tRNA methyltransferase 1, transcript variant X1
tRNA (guanine(26)-N(2))-dimethyltransferase isoform X1
tRNA methyltransferase 1, transcript variant X2
tRNA (guanine(26)-N(2))-dimethyltransferase isoform X2
mannosidase alpha class 2B member 1; Derived by automated computational analysis using gene prediction method: Gnomon.
transcription factor JunD-like; Derived by automated computational analysis using gene prediction method: Gnomon.
transcription factor JunD-like, transcript variant X2
transcription factor JunD-like, transcript variant X1
transcription factor JunD-like isoform X1
transcription factor JunD-like isoform X2
tyrosine kinase 2; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; deleted 18 bases in 14 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; deleted 18 bases in 14 codons; substituted 6 bases at 6 genomic stop codons; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: non-receptor tyrosine-protein kinase TYK2
ribonucleoprotein, PTB binding 1; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 3 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 3 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: ribonucleoprotein PTB-binding 1
uncharacterized LOC128849558; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC128849558, transcript variant X1
uncharacterized LOC128849558, transcript variant X2
uncharacterized LOC128849559; Derived by automated computational analysis using gene prediction method: Gnomon.