Dioscorea cayenensis subsp. rotundata cultivar TDr96_F1 chromosome 28, TDr96_F1_v2_PseudoChromosome.rev07_lg8_w22 25.fasta, whole genome shotgun sequence.
type: Entry
definition: Dioscorea cayenensis subsp. rotundata cultivar TDr96_F1 chromosome 28, TDr96_F1_v2_PseudoChromosome.rev07_lg8_w22 25.fasta, whole genome shotgun sequence.
sequence version: NC_052498.1
sequence date: 2021-02-02
sequence: sequence
division: CON
label: NC_052498.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA695139
dblink: SAMD00039982
keyword: WGS
keyword: RefSeq
source: Dioscorea cayenensis subsp. rotundata (Guinea yam)
organism: Dioscorea cayenensis subsp. rotundata
taxonomy: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Dioscoreales; Dioscoreaceae; Dioscorea.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nBLBR01000028.1.\nAssembly name: TDr96_F1_v2_PseudoChromosome.rev07_lg8_w22 25.fasta\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Genetics and Breeding, Iwate\nBiotechnology Research Center on 2019/11/25. The original\nwhole-genome shotgun project has the accession BLBR00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Genetics and Breeding, Iwate Biotechnology\n Research Center\nAssembly Method :: flye v. 2.4.2; pilon v. 1.23; Purge\n Haplotigs v. 1.0.4; MSTmap\nAssembly Name :: TDr96_F1_v2_PseudoChromosome.rev07_lg8_w22\n 25.fasta\nGenome Coverage :: 34x\nSequencing Technology :: Nanopore PromethION\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Dioscorea cayenensis subsp.\n rotundata Annotation Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.5\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 68823
topology: linear
so has quality: SO_0000987
location: 1..68823
location: region:1-68823:1
RO_0002162: 55577

NC_052498
type: RefSeq
SIO_000068: refseq

PRJNA695139
type: BioProject
SIO_000068: bioproject

SAMD00039982
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:68823:1
position: 68823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-68823:1:source
so part of: sequence
organism: Dioscorea cayenensis subsp. rotundata
mol type: genomic DNA
cultivar: TDr96_F1
sub species: rotundata
chromosome: 28
country: Japan:Iwate
collection date: 2016-06-01

55577
type: Taxonomy
SIO_000068: taxonomy

LOC120253265
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120253265
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(367..3393)
location: region:367-3393:-1
so has part: feature:367-3393:-1:exon
subclass of: SO_0000010

120253265
type: Gene
SIO_000068: ncbigene

position:367:-1
position: 367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3393:-1
position: 3393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:367-3393:-1:exon

LOC120253265
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 55577
gene: LOC120253265
product: rho GTPase-activating protein 17-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_039261594.1
SIO_010081: LOC120253265
subclass of: SO_0000673
so part of: LOC120253265
location: complement(join(367..687,772..847,2708..2805,2885..3393))
location: region:367-3393:-1
so has part: feature:2885-3393:-1:exon
so has part: feature:2708-2805:-1:exon
so has part: feature:772-847:-1:exon
so has part: feature:367-687:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2885-3393:-1:exon

position:2885:-1
position: 2885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2708-2805:-1:exon

position:2708:-1
position: 2708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2805:-1
position: 2805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:772-847:-1:exon

position:772:-1
position: 772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:847:-1
position: 847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:367-687:-1:exon

position:687:-1
position: 687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120253265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 55577
gene: LOC120253265
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho GTPase-activating protein 17-like
translation: MAASPKPWEGTPPPVIGKAGRYTVFITPPPTPRPSSNSPKPPTSSPRSIPRPRPVNAAAFAVKDPTSPPPPPVQVPPQQFEKPASQKGSASSFGFFWDAIAKVQDVHSSLDEYLADWFGLNQSKYQWALNDYYESKGLDKDDSKRKELATKDQAQ
SIO_010081: LOC120253265
subclass of: SO_0000673
so part of: LOC120253265
location: complement(join(794..847,2708..2805,2885..3200))
location: region:794-3200:-1
so has part: feature:2885-3200:-1:exon
so has part: feature:2708-2805:-1:exon
so has part: feature:794-847:-1:exon

XP_039117528.1
type: Protein
SIO_000068: ncbiprotein

position:794:-1
position: 794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3200:-1
position: 3200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2885-3200:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2708-2805:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:794-847:-1:exon

LOC120253266
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120253266
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4295..7192
location: region:4295-7192:1
so has part: feature:4295-7192:1:exon
subclass of: SO_0000010

120253266
type: Gene
SIO_000068: ncbigene

position:4295:1
position: 4295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7192:1
position: 7192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4295-7192:1:exon

LOC120253266
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 55577
gene: LOC120253266
product: uncharacterized protein At2g39910
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_039261595.1
SIO_010081: LOC120253266
subclass of: SO_0000673
so part of: LOC120253266
location: join(4295..4875,5050..5136,5576..5766,6240..6435,6628..6692,6784..6885,6967..7192)
location: region:4295-7192:1
so has part: feature:4295-4875:1:exon
so has part: feature:5050-5136:1:exon
so has part: feature:5576-5766:1:exon
so has part: feature:6240-6435:1:exon
so has part: feature:6628-6692:1:exon
so has part: feature:6784-6885:1:exon
so has part: feature:6967-7192:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4295-4875:1:exon

position:4875:1
position: 4875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5050-5136:1:exon

position:5050:1
position: 5050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5136:1
position: 5136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5576-5766:1:exon

position:5576:1
position: 5576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5766:1
position: 5766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6240-6435:1:exon

position:6240:1
position: 6240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6435:1
position: 6435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6628-6692:1:exon

position:6628:1
position: 6628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6692:1
position: 6692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6784-6885:1:exon

position:6784:1
position: 6784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6885:1
position: 6885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6967-7192:1:exon

position:6967:1
position: 6967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120253266
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 55577
gene: LOC120253266
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein At2g39910
translation: MAASPPRCYSLPRPLLLRLSSPIRESLSQTPYSPPEGSAVSVKSLLEGLLRHRDQVPEDEFRVEIRDFILCCAAMAASEGVESPAVYWVPAELAKAARSALREMAVAVGLNSEREMVAEMIPEVVVQLKGVIKESCVDPESVEVAAASAKAPVAYAVLAAHQFRWLVNQILFPNLGKLIWLVIPCALTALDHWSPEVKEQGMLTFMHVGKNVTMAELGWYEDAILDACCRNIASSDELWHCVVEVSVLMLTCLEGKNPRSSWFEQIMNEMLGHLERQPMKKDRRVAWLRLIQPVFNAMGLVLLAHFRRIFSLFFHWMHADDDKTILLVLERLNDIIKLTWIRKSPYFQRLVDELILLYKESATKKSREIIRNEIMQTLILLQKCQGLCFESAWNKHNDDPDLTVLTSSFSNLVCSGPESCT
SIO_010081: LOC120253266
subclass of: SO_0000673
so part of: LOC120253266
location: join(4369..4875,5050..5136,5576..5766,6240..6435,6628..6692,6784..6885,6967..7084)
location: region:4369-7084:1
so has part: feature:4369-4875:1:exon
so has part: feature:5050-5136:1:exon
so has part: feature:5576-5766:1:exon
so has part: feature:6240-6435:1:exon
so has part: feature:6628-6692:1:exon
so has part: feature:6784-6885:1:exon
so has part: feature:6967-7084:1:exon

XP_039117529.1
type: Protein
SIO_000068: ncbiprotein

position:4369:1
position: 4369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7084:1
position: 7084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4369-4875:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5050-5136:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5576-5766:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6240-6435:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6628-6692:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6784-6885:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6967-7084:1:exon

LOC120253267
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120253267
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7198..7835)
location: region:7198-7835:-1
so has part: feature:7198-7835:-1:exon
subclass of: SO_0000010

120253267
type: Gene
SIO_000068: ncbigene

position:7198:-1
position: 7198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7835:-1
position: 7835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7198-7835:-1:exon

LOC120253267
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 55577
gene: LOC120253267
product: ethylene-responsive transcription factor ERF003-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_039261596.1
SIO_010081: LOC120253267
subclass of: SO_0000673
so part of: LOC120253267
location: complement(join(7198..7665,7744..7835))
location: region:7198-7835:-1
so has part: feature:7744-7835:-1:exon
so has part: feature:7198-7665:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7744-7835:-1:exon

position:7744:-1
position: 7744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7198-7665:-1:exon

position:7665:-1
position: 7665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120253267
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 55577
gene: LOC120253267
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ethylene-responsive transcription factor ERF003-like
translation: MPKMQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAKTNFPVDPNGPNRSSVLSASLIAKLDRCCGTLSEELKGKEEEEVKCLDDECIEEMIQELIYYGSVEISSSTSSSASFSSV
SIO_010081: LOC120253267
subclass of: SO_0000673
so part of: LOC120253267
location: complement(join(7329..7665,7744..7823))
location: region:7329-7823:-1
so has part: feature:7744-7823:-1:exon
so has part: feature:7329-7665:-1:exon

XP_039117530.1
type: Protein
SIO_000068: ncbiprotein

position:7329:-1
position: 7329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7823:-1
position: 7823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7744-7823:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7329-7665:-1:exon

LOC120253259
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120253259
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 16480..18003
location: region:16480-18003:1
so has part: feature:16480-18003:1:exon
subclass of: SO_0000010

120253259
type: Gene
SIO_000068: ncbigene

position:16480:1
position: 16480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18003:1
position: 18003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16480-18003:1:exon

LOC120253259
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 55577
gene: LOC120253259
product: protein LIGULELESS 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 73% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_039261589.1
SIO_010081: LOC120253259
subclass of: SO_0000673
so part of: LOC120253259
location: join(16480..16773,16874..17082,17249..17415,17491..18003)
location: region:16480-18003:1
so has part: feature:16480-16773:1:exon
so has part: feature:16874-17082:1:exon
so has part: feature:17249-17415:1:exon
so has part: feature:17491-18003:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16480-16773:1:exon

position:16773:1
position: 16773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:16874-17082:1:exon

position:16874:1
position: 16874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17082:1
position: 17082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:17249-17415:1:exon

position:17249:1
position: 17249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17415:1
position: 17415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:17491-18003:1:exon

position:17491:1
position: 17491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120253259
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 55577
gene: LOC120253259
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein LIGULELESS 1-like
translation: MMNRHGSIDSYHVPSIMSFAGLEATSQKHQQSSSIWDYETTTSTTTSATTTNANTHQNHPYLFTNTTTTNNNTQFLDCTPQLFLPASNLPFYAPAPPPLLGDFGAGLEDGYAFGHHPPPRCQADGCGADLSGAKHYHRRHKVCEFHSKAAVVLFAGGVQQRFCQQCSRFHVLSEFDETKRSCRKRLADHNRRRRKPKPHQSSSSNSPSQKTKPSPPKPSPKHPQESSKKEINHNHNHNHHHHQFKNDPSLSLGGLERVNSYNNESMDVSQQELFSNDFFNNQSLLCSTSNEDSRSRDAGQSSLLQLGQAAMFSMDFI
SIO_010081: LOC120253259
subclass of: SO_0000673
so part of: LOC120253259
location: join(16480..16773,16874..17082,17249..17415,17491..17774)
location: region:16480-17774:1
so has part: feature:16480-16773:1:exon
so has part: feature:16874-17082:1:exon
so has part: feature:17249-17415:1:exon
so has part: feature:17491-17774:1:exon

XP_039117523.1
type: Protein
SIO_000068: ncbiprotein

position:17774:1
position: 17774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16480-16773:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:16874-17082:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:17249-17415:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:17491-17774:1:exon

LOC120253257
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120253257
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 26091..27344
location: region:26091-27344:1
so has part: feature:26091-27344:1:exon
subclass of: SO_0000010

120253257
type: Gene
SIO_000068: ncbigene

position:26091:1
position: 26091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27344:1
position: 27344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26091-27344:1:exon

LOC120253257
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 55577
gene: LOC120253257
product: nifU-like protein 3, chloroplastic
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_039261586.1
SIO_010081: LOC120253257
subclass of: SO_0000673
so part of: LOC120253257
location: join(26091..26447,26525..26609,26708..26997,27067..27344)
location: region:26091-27344:1
so has part: feature:26091-26447:1:exon
so has part: feature:26525-26609:1:exon
so has part: feature:26708-26997:1:exon
so has part: feature:27067-27344:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:26091-26447:1:exon

position:26447:1
position: 26447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:26525-26609:1:exon

position:26525:1
position: 26525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26609:1
position: 26609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:26708-26997:1:exon

position:26708:1
position: 26708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26997:1
position: 26997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:27067-27344:1:exon

position:27067:1
position: 27067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120253257
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 55577
gene: LOC120253257
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nifU-like protein 3, chloroplastic
translation: MGLLSSPFQGFTSTSMAATRNSPSSHTAEILSTSHLPHHKTSLSFHGNHSNATSFFRLALSHPNRIRHGWRVRVLPLTEENVEMVLDEVRPGLMADGGNVALHEIDGLVVVLKLQGACGSCPSSTMTLKMGIETRLRDKIPEIFAIEQIIDTETGLELNEDNVEKILAEIRPYLAGTGGGVLELVEINDYVVKVRLSGPAAGVMTVRVALTQKLREKIPLIAAVQLIE
SIO_010081: LOC120253257
subclass of: SO_0000673
so part of: LOC120253257
location: join(26328..26447,26525..26609,26708..26997,27067..27258)
location: region:26328-27258:1
so has part: feature:26328-26447:1:exon
so has part: feature:26525-26609:1:exon
so has part: feature:26708-26997:1:exon
so has part: feature:27067-27258:1:exon

XP_039117520.1
type: Protein
SIO_000068: ncbiprotein

position:26328:1
position: 26328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27258:1
position: 27258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26328-26447:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:26525-26609:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:26708-26997:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:27067-27258:1:exon

LOC120253260
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120253260
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(27309..28439)
location: region:27309-28439:-1
so has part: feature:27309-28439:-1:exon
subclass of: SO_0000010

120253260
type: Gene
SIO_000068: ncbigene

position:27309:-1
position: 27309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28439:-1
position: 28439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27309-28439:-1:exon

LOC120253260
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 55577
gene: LOC120253260
product: pentatricopeptide repeat-containing protein At3g61360-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 98% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_039261590.1
SIO_010081: LOC120253260
subclass of: SO_0000673
so part of: LOC120253260
location: complement(join(27309..28089,28204..28439))
location: region:27309-28439:-1
so has part: feature:28204-28439:-1:exon
so has part: feature:27309-28089:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:28204-28439:-1:exon

position:28204:-1
position: 28204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:27309-28089:-1:exon

position:28089:-1
position: 28089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120253260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 55577
gene: LOC120253260
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pentatricopeptide repeat-containing protein At3g61360-like
translation: MPQSLLLSRPSILSPYSLSILLSSHAKFQPFNSTIHLFDELRHSYNSAGLAFGVDEFNVLLRAFCVQRRMGEARLVFNRGFEPDVVSFNIRIDACCKKGRFLDALTVFDEMSKRNLSPTLQTLTTLVYGAGIAGDLPKAQELFDEMFERGLDVDRGAYNALMSCHMRVGNLKGGMAVMDEMVEKGIELDDVSYYTVLSRLKKLEDVCLVYGRMIGNRFVPRMRTVMLLMKVFCNNKRLDLGLQFWDYIVEKGLCLHCHVLDVLVIGLCGGGREDEGYRCFKQVVQSGRQPLDRTYRLLEGLLVKANEFKKLEELRDMMSRFMDLDTK
SIO_010081: LOC120253260
subclass of: SO_0000673
so part of: LOC120253260
location: complement(join(27342..28089,28204..28439))
location: region:27342-28439:-1
so has part: feature:28204-28439:-1:exon
so has part: feature:27342-28089:-1:exon

XP_039117524.1
type: Protein
SIO_000068: ncbiprotein

position:27342:-1
position: 27342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28204-28439:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:27342-28089:-1:exon

LOC120253261
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120253261
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 28783..30409
location: region:28783-30409:1
so has part: feature:28783-30409:1:exon

120253261
type: Gene
SIO_000068: ncbigene

position:28783:1
position: 28783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30409:1
position: 30409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28783-30409:1:exon

LOC120253261
type: Exon
subclass of: SO_0000147
RO_0002162: 55577
gene: LOC120253261
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 15% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC120253261
subclass of: SO_0000673
so part of: LOC120253261
location: 28783..28857
location: region:28783-28857:1
so has part: feature:28783-28857:1:exon

position:28857:1
position: 28857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28783-28857:1:exon

LOC120253261
type: Exon
subclass of: SO_0000147
RO_0002162: 55577
gene: LOC120253261
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 15% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC120253261
subclass of: SO_0000673
so part of: LOC120253261
location: 29708..29857
location: region:29708-29857:1
so has part: feature:29708-29857:1:exon

position:29708:1
position: 29708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29857:1
position: 29857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29708-29857:1:exon

LOC120253261
type: Exon
subclass of: SO_0000147
RO_0002162: 55577
gene: LOC120253261
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 15% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC120253261
subclass of: SO_0000673
so part of: LOC120253261
location: 30044..30302
location: region:30044-30302:1
so has part: feature:30044-30302:1:exon

position:30044:1
position: 30044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30302:1
position: 30302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30044-30302:1:exon

LOC120253261
type: Exon
subclass of: SO_0000147
RO_0002162: 55577
gene: LOC120253261
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 15% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC120253261
subclass of: SO_0000673
so part of: LOC120253261
location: 30401..30409
location: region:30401-30409:1
so has part: feature:30401-30409:1:exon

position:30401:1
position: 30401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30401-30409:1:exon

LOC120253264
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120253264
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(33505..37563)
location: region:33505-37563:-1
so has part: feature:33505-37563:-1:exon

120253264
type: Gene
SIO_000068: ncbigene

position:33505:-1
position: 33505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37563:-1
position: 37563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33505-37563:-1:exon

LOC120253264
type: Exon
subclass of: SO_0000147
RO_0002162: 55577
gene: LOC120253264
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC120253264
subclass of: SO_0000673
so part of: LOC120253264
location: complement(33505..34918)
location: region:33505-34918:-1
so has part: feature:33505-34918:-1:exon

position:34918:-1
position: 34918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33505-34918:-1:exon

LOC120253264
type: Exon
subclass of: SO_0000147
RO_0002162: 55577
gene: LOC120253264
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC120253264
subclass of: SO_0000673
so part of: LOC120253264
location: complement(35014..35321)
location: region:35014-35321:-1
so has part: feature:35014-35321:-1:exon

position:35014:-1
position: 35014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35321:-1
position: 35321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35014-35321:-1:exon

LOC120253264
type: Exon
subclass of: SO_0000147
RO_0002162: 55577
gene: LOC120253264
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC120253264
subclass of: SO_0000673
so part of: LOC120253264
location: complement(35661..36339)
location: region:35661-36339:-1
so has part: feature:35661-36339:-1:exon

position:35661:-1
position: 35661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:36339:-1
position: 36339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35661-36339:-1:exon

LOC120253264
type: Exon
subclass of: SO_0000147
RO_0002162: 55577
gene: LOC120253264
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC120253264
subclass of: SO_0000673
so part of: LOC120253264
location: complement(37419..37563)
location: region:37419-37563:-1
so has part: feature:37419-37563:-1:exon

position:37419:-1
position: 37419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37419-37563:-1:exon

LOC120253258
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120253258
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(42747..49032)
location: region:42747-49032:-1
so has part: feature:42747-49032:-1:exon
subclass of: SO_0000010

120253258
type: Gene
SIO_000068: ncbigene

position:42747:-1
position: 42747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49032:-1
position: 49032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42747-49032:-1:exon

LOC120253258
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 55577
gene: LOC120253258
product: rsm22-cox11 tandem protein 2, mitochondrial-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_039261588.1
SIO_010081: LOC120253258
subclass of: SO_0000673
so part of: LOC120253258
location: complement(join(42747..43285,43727..43815,44384..44463,45519..45614,45735..45839,45929..46009,46721..46804,47790..47887,48178..48272,48372..48446,48540..48808,48885..49032))
location: region:42747-49032:-1
so has part: feature:48885-49032:-1:exon
so has part: feature:48540-48808:-1:exon
so has part: feature:48372-48446:-1:exon
so has part: feature:48178-48272:-1:exon
so has part: feature:47790-47887:-1:exon
so has part: feature:46721-46804:-1:exon
so has part: feature:45929-46009:-1:exon
so has part: feature:45735-45839:-1:exon
so has part: feature:45519-45614:-1:exon
so has part: feature:44384-44463:-1:exon
so has part: feature:43727-43815:-1:exon
so has part: feature:42747-43285:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:48885-49032:-1:exon

position:48885:-1
position: 48885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:48540-48808:-1:exon

position:48540:-1
position: 48540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48808:-1
position: 48808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:48372-48446:-1:exon

position:48372:-1
position: 48372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48446:-1
position: 48446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:48178-48272:-1:exon

position:48178:-1
position: 48178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48272:-1
position: 48272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:47790-47887:-1:exon

position:47790:-1
position: 47790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:47887:-1
position: 47887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:46721-46804:-1:exon

position:46721:-1
position: 46721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46804:-1
position: 46804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:45929-46009:-1:exon

position:45929:-1
position: 45929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46009:-1
position: 46009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:45735-45839:-1:exon

position:45735:-1
position: 45735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45839:-1
position: 45839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:45519-45614:-1:exon

position:45519:-1
position: 45519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45614:-1
position: 45614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:44384-44463:-1:exon

position:44384:-1
position: 44384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44463:-1
position: 44463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:43727-43815:-1:exon

position:43727:-1
position: 43727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43815:-1
position: 43815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:42747-43285:-1:exon

position:43285:-1
position: 43285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120253258
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 55577
gene: LOC120253258
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: rsm22-cox11 tandem protein 2, mitochondrial-like
translation: MAMTTKLFNPETLRAAAKQSEGIHLVPLSLRRAIKKFLRERELAHMNRKVLLLSQSFNLIKETNLQLAASASRELVDDPMKSLDDRSGRWKIKSSYGDIGFKYQEDETVAYVASRMPAVYSACHRVLKEVRQRLPGFSPTSVLDFGAGPGSALWAMREVWPRSLERVNLVEPSKSMQRAAQSLLGDLKNLPLIHSYDSIQALNRKLEKRDRAHDLVISSYALGEIPSLRDRITIVRQLWDLTQDVLVLLEPGTPHGSKIIRQMRSYILWMAKRKSRKSKITQSEVPCSGKSISSEVANLENDAFVVAPCPHDGRCPLENTSKYCHFVQRLERTSSQRAYKRSKGEPLRGFEDEKFCFVALRRGKRPQEAWPLDGMEFETLKEQHAKRNPEDLIIDYDDQFETEDDNIISFEEDPVLYPSDVAETSLFHQEDNNNDDENIEEGSEDQPHAGLGGGWGRILYMPHRRGRQVSMDICRATKRDASEGALQRLVVTQSKNPALHFQARRSIWGDLWPF
SIO_010081: LOC120253258
subclass of: SO_0000673
so part of: LOC120253258
location: complement(join(42930..43285,43727..43815,44384..44463,45519..45614,45735..45839,45929..46009,46721..46804,47790..47887,48178..48272,48372..48446,48540..48808,48885..49002))
location: region:42930-49002:-1
so has part: feature:48885-49002:-1:exon
so has part: feature:48540-48808:-1:exon
so has part: feature:48372-48446:-1:exon
so has part: feature:48178-48272:-1:exon
so has part: feature:47790-47887:-1:exon
so has part: feature:46721-46804:-1:exon
so has part: feature:45929-46009:-1:exon
so has part: feature:45735-45839:-1:exon
so has part: feature:45519-45614:-1:exon
so has part: feature:44384-44463:-1:exon
so has part: feature:43727-43815:-1:exon
so has part: feature:42930-43285:-1:exon

XP_039117522.1
type: Protein
SIO_000068: ncbiprotein

position:42930:-1
position: 42930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49002:-1
position: 49002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48885-49002:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:48540-48808:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:48372-48446:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:48178-48272:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:47790-47887:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:46721-46804:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:45929-46009:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:45735-45839:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:45519-45614:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:44384-44463:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:43727-43815:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:42930-43285:-1:exon

LOC120253263
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120253263
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(57062..66164)
location: region:57062-66164:-1
so has part: feature:57062-66164:-1:exon
subclass of: SO_0000010

120253263
type: Gene
SIO_000068: ncbigene

position:57062:-1
position: 57062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:66164:-1
position: 66164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57062-66164:-1:exon

LOC120253263
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 55577
gene: LOC120253263
product: mitogen-activated protein kinase homolog D5-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 70 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_039261592.1
SIO_010081: LOC120253263
subclass of: SO_0000673
so part of: LOC120253263
location: complement(join(57062..57587,59238..59418,60157..60486,63921..64058,65707..65836,65915..66164))
location: region:57062-66164:-1
so has part: feature:65915-66164:-1:exon
so has part: feature:65707-65836:-1:exon
so has part: feature:63921-64058:-1:exon
so has part: feature:60157-60486:-1:exon
so has part: feature:59238-59418:-1:exon
so has part: feature:57062-57587:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:65915-66164:-1:exon

position:65915:-1
position: 65915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:65707-65836:-1:exon

position:65707:-1
position: 65707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:65836:-1
position: 65836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:63921-64058:-1:exon

position:63921:-1
position: 63921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64058:-1
position: 64058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:60157-60486:-1:exon

position:60157:-1
position: 60157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:60486:-1
position: 60486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:59238-59418:-1:exon

position:59238:-1
position: 59238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:59418:-1
position: 59418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:57062-57587:-1:exon

position:57587:-1
position: 57587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120253263
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 55577
gene: LOC120253263
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitogen-activated protein kinase homolog D5-like
translation: MGETQEGAEEMPEAQKEGGAAPVKMESTLCHGGRFVRYNTCSNRRIVFEVTSKYKPPIIPLRSDPYSVTWSVLNSETGEQVAIKRIRYAFDKMIYAKRMLREVKILRHMDHENVLAIRDIIPPPQWELFNDVYIAYELMETNLHQIIHSDQPLSEEHIQYILYQILCGLKYIHSASVLHGDLQPSNILLNASCDLKIFDFGFEPITSPFIREYIPATKSYRAPELLLNSSGYTAAIDVWSVGCIFMELVERKCLFPGKDIVHQICLVLELIGTPKEDDLGFLDEVDRRSILGLPCYARQSFAEKFPQMHRTAIDLVEKMLTFNPSQRITVEDALAHPYFASLHDTSDEPVCKTPFSFDFEQHVLTEEHVKELIYREALALNPEYQT
SIO_010081: LOC120253263
subclass of: SO_0000673
so part of: LOC120253263
location: complement(join(57415..57587,59238..59418,60157..60486,63921..64058,65707..65836,65915..66123))
location: region:57415-66123:-1
so has part: feature:65915-66123:-1:exon
so has part: feature:65707-65836:-1:exon
so has part: feature:63921-64058:-1:exon
so has part: feature:60157-60486:-1:exon
so has part: feature:59238-59418:-1:exon
so has part: feature:57415-57587:-1:exon

XP_039117526.1
type: Protein
SIO_000068: ncbiprotein

position:57415:-1
position: 57415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:66123:-1
position: 66123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65915-66123:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:65707-65836:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:63921-64058:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:60157-60486:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:59238-59418:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:57415-57587:-1:exon

LOC120253262
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120253262
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 66959..67798
location: region:66959-67798:1
so has part: feature:66959-67798:1:exon
subclass of: SO_0000010

120253262
type: Gene
SIO_000068: ncbigene

position:66959:1
position: 66959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:67798:1
position: 67798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66959-67798:1:exon

LOC120253262
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 55577
gene: LOC120253262
product: uncharacterized LOC120253262
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_039261591.1
SIO_010081: LOC120253262
subclass of: SO_0000673
so part of: LOC120253262
location: 66959..67798
location: region:66959-67798:1
so has part: feature:66959-67798:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:66959-67798:1:exon

LOC120253262
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 55577
gene: LOC120253262
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC120253262
translation: MSGSSSKSETTVGTTSLKAPTRDGTVTLQYPLLTKSNYSAWALKMKVYMRAQGVWDAIEPIDPNEEIETRKDQMALAAIYQGISEETLLVLAEKETAKEAWEMLKTMHMGAERVKEAKIQTLRSEFEGLRMREAETVDDFATKLTTIVNKIRALGDKVEEAYVVKKLLRVVPSKFIQIASTIEQFGNLQTMTVEEVIGSLKAHEERLRGYEDEKEEHILLTKAEWKAREECEGISNSSRGRGGSNWRGRDYGRGRGRGRNDGGRGSDNNHQEKKFDKQR
SIO_010081: LOC120253262
subclass of: SO_0000673
so part of: LOC120253262
location: 66959..67798
location: region:66959-67798:1
so has part: feature:66959-67798:1:exon

XP_039117525.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:66959-67798:1:exon