Dioscorea cayenensis subsp. rotundata cultivar TDr96_F1 chromosome 20, TDr96_F1_v2_PseudoChromosome.rev07_lg8_w22 25.fasta, whole genome shotgun sequence.
type: Entry
definition: Dioscorea cayenensis subsp. rotundata cultivar TDr96_F1 chromosome 20, TDr96_F1_v2_PseudoChromosome.rev07_lg8_w22 25.fasta, whole genome shotgun sequence.
sequence version: NC_052490.1
sequence date: 2021-02-02
sequence: sequence
division: CON
label: NC_052490.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA695139
dblink: SAMD00039982
keyword: WGS
keyword: RefSeq
source: Dioscorea cayenensis subsp. rotundata (Guinea yam)
organism: Dioscorea cayenensis subsp. rotundata
taxonomy: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Dioscoreales; Dioscoreaceae; Dioscorea.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nBLBR01000020.1.\nAssembly name: TDr96_F1_v2_PseudoChromosome.rev07_lg8_w22 25.fasta\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Genetics and Breeding, Iwate\nBiotechnology Research Center on 2019/11/25. The original\nwhole-genome shotgun project has the accession BLBR00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Genetics and Breeding, Iwate Biotechnology\n Research Center\nAssembly Method :: flye v. 2.4.2; pilon v. 1.23; Purge\n Haplotigs v. 1.0.4; MSTmap\nAssembly Name :: TDr96_F1_v2_PseudoChromosome.rev07_lg8_w22\n 25.fasta\nGenome Coverage :: 34x\nSequencing Technology :: Nanopore PromethION\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Dioscorea cayenensis subsp.\n rotundata Annotation Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.5\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 33023525
topology: linear
so has quality: SO_0000987
location: 1..33023525
location: region:1-33023525:1
RO_0002162: 55577

NC_052490
type: RefSeq
SIO_000068: refseq

PRJNA695139
type: BioProject
SIO_000068: bioproject

SAMD00039982
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33023525:1
position: 33023525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-33023525:1:source
so part of: sequence
organism: Dioscorea cayenensis subsp. rotundata
mol type: genomic DNA
cultivar: TDr96_F1
sub species: rotundata
chromosome: 20
country: Japan:Iwate
collection date: 2016-06-01

55577
type: Taxonomy
SIO_000068: taxonomy

LOC120252306
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252306
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(36536..36642)
location: region:36536-36642:-1
so has part: feature:36536-36642:-1:exon
subclass of: SO_0000578

120252306
type: Gene
SIO_000068: ncbigene

position:36536:-1
position: 36536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:36642:-1
position: 36642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36536-36642:-1:exon

LOC120252306
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252306
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533847.1
SIO_010081: LOC120252306
subclass of: SO_0000673
so part of: LOC120252306
location: complement(36536..36642)
location: region:36536-36642:-1
so has part: feature:36536-36642:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:36536-36642:-1:exon

LOC120252341
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252341
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(49075..49180)
location: region:49075-49180:-1
so has part: feature:49075-49180:-1:exon
subclass of: SO_0000578

120252341
type: Gene
SIO_000068: ncbigene

position:49075:-1
position: 49075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49180:-1
position: 49180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49075-49180:-1:exon

LOC120252341
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252341
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533880.1
SIO_010081: LOC120252341
subclass of: SO_0000673
so part of: LOC120252341
location: complement(49075..49180)
location: region:49075-49180:-1
so has part: feature:49075-49180:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:49075-49180:-1:exon

LOC120252078
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252078
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 86090..86196
location: region:86090-86196:1
so has part: feature:86090-86196:1:exon
subclass of: SO_0000578

120252078
type: Gene
SIO_000068: ncbigene

position:86090:1
position: 86090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:86196:1
position: 86196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:86090-86196:1:exon

LOC120252078
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252078
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533629.1
SIO_010081: LOC120252078
subclass of: SO_0000673
so part of: LOC120252078
location: 86090..86196
location: region:86090-86196:1
so has part: feature:86090-86196:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:86090-86196:1:exon

LOC120252096
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252096
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(159317..159423)
location: region:159317-159423:-1
so has part: feature:159317-159423:-1:exon
subclass of: SO_0000578

120252096
type: Gene
SIO_000068: ncbigene

position:159317:-1
position: 159317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:159423:-1
position: 159423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:159317-159423:-1:exon

LOC120252096
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252096
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533645.1
SIO_010081: LOC120252096
subclass of: SO_0000673
so part of: LOC120252096
location: complement(159317..159423)
location: region:159317-159423:-1
so has part: feature:159317-159423:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:159317-159423:-1:exon

LOC120252227
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252227
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(172047..172153)
location: region:172047-172153:-1
so has part: feature:172047-172153:-1:exon
subclass of: SO_0000578

120252227
type: Gene
SIO_000068: ncbigene

position:172047:-1
position: 172047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:172153:-1
position: 172153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:172047-172153:-1:exon

LOC120252227
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252227
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533770.1
SIO_010081: LOC120252227
subclass of: SO_0000673
so part of: LOC120252227
location: complement(172047..172153)
location: region:172047-172153:-1
so has part: feature:172047-172153:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:172047-172153:-1:exon

LOC120252080
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252080
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 238194..238300
location: region:238194-238300:1
so has part: feature:238194-238300:1:exon
subclass of: SO_0000578

120252080
type: Gene
SIO_000068: ncbigene

position:238194:1
position: 238194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:238300:1
position: 238300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:238194-238300:1:exon

LOC120252080
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252080
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533630.1
SIO_010081: LOC120252080
subclass of: SO_0000673
so part of: LOC120252080
location: 238194..238300
location: region:238194-238300:1
so has part: feature:238194-238300:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:238194-238300:1:exon

LOC120252083
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252083
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(255386..255492)
location: region:255386-255492:-1
so has part: feature:255386-255492:-1:exon
subclass of: SO_0000578

120252083
type: Gene
SIO_000068: ncbigene

position:255386:-1
position: 255386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:255492:-1
position: 255492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:255386-255492:-1:exon

LOC120252083
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252083
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533633.1
SIO_010081: LOC120252083
subclass of: SO_0000673
so part of: LOC120252083
location: complement(255386..255492)
location: region:255386-255492:-1
so has part: feature:255386-255492:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:255386-255492:-1:exon

TRNAP-UGG
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: TRNAP-UGG
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(292767..292841)
location: region:292767-292841:-1
so has part: feature:292767-292841:-1:exon
subclass of: SO_0000663

120252464
type: Gene
SIO_000068: ncbigene

position:292767:-1
position: 292767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:292841:-1
position: 292841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:292767-292841:-1:exon

TRNAP-UGG
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 55577
gene: TRNAP-UGG
product: tRNA-Pro
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA proline (anticodon UGG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(292804..292806),aa:Pro,seq:tgg)
SIO_010081: TRNAP-UGG
subclass of: SO_0000673
so part of: TRNAP-UGG
location: complement(292767..292841)
location: region:292767-292841:-1
so has part: feature:292767-292841:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:292767-292841:-1:exon

LOC120251952
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120251952
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 322443..323559
location: region:322443-323559:1
so has part: feature:322443-323559:1:exon

120251952
type: Gene
SIO_000068: ncbigene

position:322443:1
position: 322443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:323559:1
position: 323559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:322443-323559:1:exon

LOC120251952
type: Exon
subclass of: SO_0000147
RO_0002162: 55577
gene: LOC120251952
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
pseudo: true
SIO_010081: LOC120251952
subclass of: SO_0000673
so part of: LOC120251952
location: 322443..323559
location: region:322443-323559:1
so has part: feature:322443-323559:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:322443-323559:1:exon

TRNAN-GUU
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: TRNAN-GUU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(344692..344763)
location: region:344692-344763:-1
so has part: feature:344692-344763:-1:exon
subclass of: SO_0000663

120252465
type: Gene
SIO_000068: ncbigene

position:344692:-1
position: 344692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:344763:-1
position: 344763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:344692-344763:-1:exon

TRNAN-GUU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 55577
gene: TRNAN-GUU
product: tRNA-Asn
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA asparagine (anticodon GUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(344729..344731),aa:Asn,seq:gtt)
SIO_010081: TRNAN-GUU
subclass of: SO_0000673
so part of: TRNAN-GUU
location: complement(344692..344763)
location: region:344692-344763:-1
so has part: feature:344692-344763:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:344692-344763:-1:exon

LOC120251842
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120251842
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 345084..345754
location: region:345084-345754:1
so has part: feature:345084-345754:1:exon

120251842
type: Gene
SIO_000068: ncbigene

position:345084:1
position: 345084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:345754:1
position: 345754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:345084-345754:1:exon

LOC120251842
type: Exon
subclass of: SO_0000147
RO_0002162: 55577
gene: LOC120251842
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC120251842
subclass of: SO_0000673
so part of: LOC120251842
location: 345084..345754
location: region:345084-345754:1
so has part: feature:345084-345754:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:345084-345754:1:exon

LOC120252107
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252107
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 354302..354408
location: region:354302-354408:1
so has part: feature:354302-354408:1:exon
subclass of: SO_0000578

120252107
type: Gene
SIO_000068: ncbigene

position:354302:1
position: 354302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:354408:1
position: 354408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:354302-354408:1:exon

LOC120252107
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252107
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533655.1
SIO_010081: LOC120252107
subclass of: SO_0000673
so part of: LOC120252107
location: 354302..354408
location: region:354302-354408:1
so has part: feature:354302-354408:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:354302-354408:1:exon

LOC120252298
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252298
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 376488..376594
location: region:376488-376594:1
so has part: feature:376488-376594:1:exon
subclass of: SO_0000578

120252298
type: Gene
SIO_000068: ncbigene

position:376488:1
position: 376488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:376594:1
position: 376594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:376488-376594:1:exon

LOC120252298
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252298
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533839.1
SIO_010081: LOC120252298
subclass of: SO_0000673
so part of: LOC120252298
location: 376488..376594
location: region:376488-376594:1
so has part: feature:376488-376594:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:376488-376594:1:exon

LOC120252079
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252079
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: 389511..389629
location: region:389511-389629:1
so has part: feature:389511-389629:1:exon

120252079
type: Gene
SIO_000068: ncbigene

position:389511:1
position: 389511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:389629:1
position: 389629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:389511-389629:1:exon

LOC120252079
type: Exon
subclass of: SO_0000147
RO_0002162: 55577
gene: LOC120252079
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00001
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC120252079
subclass of: SO_0000673
so part of: LOC120252079
location: 389511..389629
location: region:389511-389629:1
so has part: feature:389511-389629:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:389511-389629:1:exon

LOC120251714
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120251714
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(503347..508276)
location: region:503347-508276:-1
so has part: feature:503347-508276:-1:exon
subclass of: SO_0000010

120251714
type: Gene
SIO_000068: ncbigene

position:503347:-1
position: 503347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:508276:-1
position: 508276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:503347-508276:-1:exon

LOC120251714
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 55577
gene: LOC120251714
product: putative MYST-like histone acetyltransferase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_039260350.1
SIO_010081: LOC120251714
subclass of: SO_0000673
so part of: LOC120251714
location: complement(join(503347..503791,503928..504070,504496..504589,504942..505103,505316..505384,505533..505745,505826..505885,506251..506339,507940..508276))
location: region:503347-508276:-1
so has part: feature:507940-508276:-1:exon
so has part: feature:506251-506339:-1:exon
so has part: feature:505826-505885:-1:exon
so has part: feature:505533-505745:-1:exon
so has part: feature:505316-505384:-1:exon
so has part: feature:504942-505103:-1:exon
so has part: feature:504496-504589:-1:exon
so has part: feature:503928-504070:-1:exon
so has part: feature:503347-503791:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:507940-508276:-1:exon

position:507940:-1
position: 507940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:506251-506339:-1:exon

position:506251:-1
position: 506251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:506339:-1
position: 506339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:505826-505885:-1:exon

position:505826:-1
position: 505826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:505885:-1
position: 505885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:505533-505745:-1:exon

position:505533:-1
position: 505533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:505745:-1
position: 505745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:505316-505384:-1:exon

position:505316:-1
position: 505316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:505384:-1
position: 505384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:504942-505103:-1:exon

position:504942:-1
position: 504942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:505103:-1
position: 505103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:504496-504589:-1:exon

position:504496:-1
position: 504496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:504589:-1
position: 504589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:503928-504070:-1:exon

position:503928:-1
position: 503928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:504070:-1
position: 504070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:503347-503791:-1:exon

position:503791:-1
position: 503791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120251714
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 55577
gene: LOC120251714
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative MYST-like histone acetyltransferase 1
translation: MGSMEPPRAEANGGSAAPAYNGGGPTANGGDSLAGRKGKAGTGAVALPLEVGTRVMCRWRDQKLHPVKVIERRKVSSLNSSDYEYYVHYTEFNRRLDEWVKLEQLDLASVETDIDEKVEDKATSLKMTRHQKRKIDETHVEAGHEELDAASLREHEEFTKVKNIAKIELGRYEIDTWYFSPFPPEYNDSVKLYFCEFCLNFMKRKEQLQRHMRKCDLKHPPGDEIYRNGTLSMFEVDGKKNKVYGQNLCYLAKLFLDHKTLYYDVDLFLFYILCECDDRGCHMVGYFSKEKHSEESYNLACILTLPPYQRKGYGKFLIAFSYELSKKEGKVGTPERPLSDLGLLSYRGYWTRVLLEILKKHKSNISIKELSDMTAIKADDILSTLQSLDLIQYRKGQHAICADPKVLDRHLKAAGRGGLEVDVSKLIWTPYKEQG
SIO_010081: LOC120251714
subclass of: SO_0000673
so part of: LOC120251714
location: complement(join(503588..503791,503928..504070,504496..504589,504942..505103,505316..505384,505533..505745,505826..505885,506251..506339,507940..508213))
location: region:503588-508213:-1
so has part: feature:507940-508213:-1:exon
so has part: feature:506251-506339:-1:exon
so has part: feature:505826-505885:-1:exon
so has part: feature:505533-505745:-1:exon
so has part: feature:505316-505384:-1:exon
so has part: feature:504942-505103:-1:exon
so has part: feature:504496-504589:-1:exon
so has part: feature:503928-504070:-1:exon
so has part: feature:503588-503791:-1:exon

XP_039116284.1
type: Protein
SIO_000068: ncbiprotein

position:503588:-1
position: 503588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:508213:-1
position: 508213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:507940-508213:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:506251-506339:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:505826-505885:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:505533-505745:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:505316-505384:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:504942-505103:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:504496-504589:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:503928-504070:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:503588-503791:-1:exon

LOC120251608
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120251608
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 523427..531028
location: region:523427-531028:1
so has part: feature:523427-531028:1:exon
subclass of: SO_0000010

120251608
type: Gene
SIO_000068: ncbigene

position:523427:1
position: 523427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:531028:1
position: 531028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:523427-531028:1:exon

LOC120251608
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 55577
gene: LOC120251608
product: zinc finger BED domain-containing protein RICESLEEPER 1-like, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_039260195.1
SIO_010081: LOC120251608
subclass of: SO_0000673
so part of: LOC120251608
location: join(523427..523679,523787..523888,524346..524418,524513..526491,526571..526652)
location: region:523427-526652:1
so has part: feature:523427-523679:1:exon
so has part: feature:523787-523888:1:exon
so has part: feature:524346-524418:1:exon
so has part: feature:524513-526491:1:exon
so has part: feature:526571-526652:1:exon

position:526652:1
position: 526652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:523427-523679:1:exon

position:523679:1
position: 523679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:523787-523888:1:exon

position:523787:1
position: 523787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:523888:1
position: 523888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:524346-524418:1:exon

position:524346:1
position: 524346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:524418:1
position: 524418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:524513-526491:1:exon

position:524513:1
position: 524513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:526491:1
position: 526491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:526571-526652:1:exon

position:526571:1
position: 526571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120251608
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 55577
gene: LOC120251608
product: zinc finger BED domain-containing protein RICESLEEPER 1-like, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_039260191.1
SIO_010081: LOC120251608
subclass of: SO_0000673
so part of: LOC120251608
location: join(523428..523679,523787..523888,524346..524418,524513..526491,526595..526671,530908..531028)
location: region:523428-531028:1
so has part: feature:523428-523679:1:exon
so has part: feature:523787-523888:1:exon
so has part: feature:524346-524418:1:exon
so has part: feature:524513-526491:1:exon
so has part: feature:526595-526671:1:exon
so has part: feature:530908-531028:1:exon

position:523428:1
position: 523428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:523428-523679:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:523787-523888:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:524346-524418:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:524513-526491:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:526595-526671:1:exon

position:526595:1
position: 526595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:526671:1
position: 526671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:530908-531028:1:exon

position:530908:1
position: 530908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120251608
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 55577
gene: LOC120251608
product: zinc finger BED domain-containing protein RICESLEEPER 1-like, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_039260192.1
SIO_010081: LOC120251608
subclass of: SO_0000673
so part of: LOC120251608
location: join(523428..523679,523787..523888,524346..524418,524513..526491,526595..526671,528247..528632)
location: region:523428-528632:1
so has part: feature:523428-523679:1:exon
so has part: feature:523787-523888:1:exon
so has part: feature:524346-524418:1:exon
so has part: feature:524513-526491:1:exon
so has part: feature:526595-526671:1:exon
so has part: feature:528247-528632:1:exon

position:528632:1
position: 528632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:523428-523679:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:523787-523888:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:524346-524418:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:524513-526491:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:526595-526671:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:528247-528632:1:exon

position:528247:1
position: 528247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120251608
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 55577
gene: LOC120251608
product: zinc finger BED domain-containing protein RICESLEEPER 1-like, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_039260193.1
SIO_010081: LOC120251608
subclass of: SO_0000673
so part of: LOC120251608
location: join(523428..523679,523787..523888,524346..524418,524513..526491,526595..526671,528262..528632)
location: region:523428-528632:1
so has part: feature:523428-523679:1:exon
so has part: feature:523787-523888:1:exon
so has part: feature:524346-524418:1:exon
so has part: feature:524513-526491:1:exon
so has part: feature:526595-526671:1:exon
so has part: feature:528262-528632:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:523428-523679:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:523787-523888:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:524346-524418:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:524513-526491:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:526595-526671:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:528262-528632:1:exon

position:528262:1
position: 528262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120251608
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 55577
gene: LOC120251608
product: zinc finger BED domain-containing protein RICESLEEPER 1-like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_039260190.1
SIO_010081: LOC120251608
subclass of: SO_0000673
so part of: LOC120251608
location: join(523428..523679,523787..523888,524346..524418,524513..526491,526595..526671,526984..528237)
location: region:523428-528237:1
so has part: feature:523428-523679:1:exon
so has part: feature:523787-523888:1:exon
so has part: feature:524346-524418:1:exon
so has part: feature:524513-526491:1:exon
so has part: feature:526595-526671:1:exon
so has part: feature:526984-528237:1:exon

position:528237:1
position: 528237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:523428-523679:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:523787-523888:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:524346-524418:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:524513-526491:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:526595-526671:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:526984-528237:1:exon

position:526984:1
position: 526984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120251608
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 55577
gene: LOC120251608
product: zinc finger BED domain-containing protein RICESLEEPER 1-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_005533456.1
SIO_010081: LOC120251608
so part of: LOC120251608
location: join(523429..523679,523787..523888,524346..524418,524513..526491,526595..526671,526974..527102,528247..528632)
location: region:523429-528632:1
so has part: feature:523429-523679:1:exon
so has part: feature:523787-523888:1:exon
so has part: feature:524346-524418:1:exon
so has part: feature:524513-526491:1:exon
so has part: feature:526595-526671:1:exon
so has part: feature:526974-527102:1:exon
so has part: feature:528247-528632:1:exon

position:523429:1
position: 523429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:523429-523679:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:523787-523888:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:524346-524418:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:524513-526491:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:526595-526671:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:526974-527102:1:exon

position:526974:1
position: 526974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:527102:1
position: 527102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:528247-528632:1:exon

LOC120251608
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 55577
gene: LOC120251608
product: zinc finger BED domain-containing protein RICESLEEPER 1-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_005533457.1
SIO_010081: LOC120251608
so part of: LOC120251608
location: join(523429..523679,523787..523888,524346..524418,524513..526491,526595..526671,526974..527102,528262..528632)
location: region:523429-528632:1
so has part: feature:523429-523679:1:exon
so has part: feature:523787-523888:1:exon
so has part: feature:524346-524418:1:exon
so has part: feature:524513-526491:1:exon
so has part: feature:526595-526671:1:exon
so has part: feature:526974-527102:1:exon
so has part: feature:528262-528632:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:523429-523679:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:523787-523888:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:524346-524418:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:524513-526491:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:526595-526671:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:526974-527102:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:528262-528632:1:exon

LOC120251608
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 55577
gene: LOC120251608
product: zinc finger BED domain-containing protein RICESLEEPER 1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_039260188.1
SIO_010081: LOC120251608
subclass of: SO_0000673
so part of: LOC120251608
location: join(523429..523679,523787..523888,524346..524418,524513..526491,526595..526671,526974..528237)
location: region:523429-528237:1
so has part: feature:523429-523679:1:exon
so has part: feature:523787-523888:1:exon
so has part: feature:524346-524418:1:exon
so has part: feature:524513-526491:1:exon
so has part: feature:526595-526671:1:exon
so has part: feature:526974-528237:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:523429-523679:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:523787-523888:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:524346-524418:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:524513-526491:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:526595-526671:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:526974-528237:1:exon

LOC120251608
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 55577
gene: LOC120251608
product: zinc finger BED domain-containing protein RICESLEEPER 1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_039260189.1
SIO_010081: LOC120251608
subclass of: SO_0000673
so part of: LOC120251608
location: join(523429..523679,524346..524418,524513..526491,526595..526671,526974..528237)
location: region:523429-528237:1
so has part: feature:523429-523679:1:exon
so has part: feature:524346-524418:1:exon
so has part: feature:524513-526491:1:exon
so has part: feature:526595-526671:1:exon
so has part: feature:526974-528237:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:523429-523679:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:524346-524418:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:524513-526491:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:526595-526671:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:526974-528237:1:exon

LOC120251608
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 55577
gene: LOC120251608
product: zinc finger BED domain-containing protein RICESLEEPER 1-like, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_039260194.1
SIO_010081: LOC120251608
subclass of: SO_0000673
so part of: LOC120251608
location: join(523429..523679,524513..526491,526595..526671,526974..528237)
location: region:523429-528237:1
so has part: feature:523429-523679:1:exon
so has part: feature:524513-526491:1:exon
so has part: feature:526595-526671:1:exon
so has part: feature:526974-528237:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:523429-523679:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:524513-526491:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:526595-526671:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:526974-528237:1:exon

LOC120251608
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 55577
gene: LOC120251608
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger BED domain-containing protein RICESLEEPER 1-like isoform X1
translation: MIICMPESMEMDGKDRNVEASHKSHNPRSRKLRSLVWNDFTKEQRADGTYIAICNHCKKHLTASSRSGTTHLKNHLGVCMSSKRTKRKKLVVRRLALKSAEAKNDGKTGGADCFQFDQELSEQDLARMIVLHGYPFGIIQHTGFKTFLRNLQPQFKLVSFETLKADCLRIYESARLKLQEVLGKLTCRVSLSVDMWKSNVDMEYMCLTCHYIDNDWRFQKKILAFLPVESLSTGEEISKAIVQSMCDWNIDRKVSSLLLDNCSFDDVVANELLKFLRPKGSLHLNGDMLHVHSCAHVLSLIVQDGLELISELINKVRDCIQYVKSSQARLAKFQDAVKQVGAPKKPIIIDIPSSWTSTYVMLETACEFQSAFTWLASNDDEYLPLSPKDWGDVKAVTECLDVFYQSILKFSTIRIPTANLYFNDICGIHLLLKTSCLSQYPIIISMAKGMLGKFQERWGTTRMVMAIASILDPRYKMKSVEYFFQKIYGDTFDAKDKIENIRKTLVTLYNEYALQSTHASSNQTFLCYAGDNSSCASNECNAGAESKNSTRITLSDARRGLDQYLQEVSSSQSMKSDLDMYLDEAVHPSKEGPDESFNILAWWKFNAAKYPVLSMMAHDILGIPVNIPLDNDGRVLNQYLSSTEPATVQALVCAQDWLKVDIEAGNLDGDVCMPLVPVNGDEFSPLSK
SIO_010081: LOC120251608
subclass of: SO_0000673
so part of: LOC120251608
location: join(524408..524418,524513..526491,526595..526671)
location: region:524408-526671:1
so has part: feature:524408-524418:1:exon
so has part: feature:524513-526491:1:exon
so has part: feature:526595-526671:1:exon

XP_039116122.1
type: Protein
SIO_000068: ncbiprotein

position:524408:1
position: 524408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:524408-524418:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:524513-526491:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:526595-526671:1:exon

LOC120251608
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 55577
gene: LOC120251608
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger BED domain-containing protein RICESLEEPER 1-like isoform X1
translation: MIICMPESMEMDGKDRNVEASHKSHNPRSRKLRSLVWNDFTKEQRADGTYIAICNHCKKHLTASSRSGTTHLKNHLGVCMSSKRTKRKKLVVRRLALKSAEAKNDGKTGGADCFQFDQELSEQDLARMIVLHGYPFGIIQHTGFKTFLRNLQPQFKLVSFETLKADCLRIYESARLKLQEVLGKLTCRVSLSVDMWKSNVDMEYMCLTCHYIDNDWRFQKKILAFLPVESLSTGEEISKAIVQSMCDWNIDRKVSSLLLDNCSFDDVVANELLKFLRPKGSLHLNGDMLHVHSCAHVLSLIVQDGLELISELINKVRDCIQYVKSSQARLAKFQDAVKQVGAPKKPIIIDIPSSWTSTYVMLETACEFQSAFTWLASNDDEYLPLSPKDWGDVKAVTECLDVFYQSILKFSTIRIPTANLYFNDICGIHLLLKTSCLSQYPIIISMAKGMLGKFQERWGTTRMVMAIASILDPRYKMKSVEYFFQKIYGDTFDAKDKIENIRKTLVTLYNEYALQSTHASSNQTFLCYAGDNSSCASNECNAGAESKNSTRITLSDARRGLDQYLQEVSSSQSMKSDLDMYLDEAVHPSKEGPDESFNILAWWKFNAAKYPVLSMMAHDILGIPVNIPLDNDGRVLNQYLSSTEPATVQALVCAQDWLKVDIEAGNLDGDVCMPLVPVNGDEFSPLSK
SIO_010081: LOC120251608
subclass of: SO_0000673
so part of: LOC120251608
location: join(524408..524418,524513..526491,526595..526671)
location: region:524408-526671:1
so has part: feature:524408-524418:1:exon
so has part: feature:524513-526491:1:exon
so has part: feature:526595-526671:1:exon

XP_039116123.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:524408-524418:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:524513-526491:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:526595-526671:1:exon

LOC120251608
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 55577
gene: LOC120251608
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger BED domain-containing protein RICESLEEPER 1-like isoform X1
translation: MIICMPESMEMDGKDRNVEASHKSHNPRSRKLRSLVWNDFTKEQRADGTYIAICNHCKKHLTASSRSGTTHLKNHLGVCMSSKRTKRKKLVVRRLALKSAEAKNDGKTGGADCFQFDQELSEQDLARMIVLHGYPFGIIQHTGFKTFLRNLQPQFKLVSFETLKADCLRIYESARLKLQEVLGKLTCRVSLSVDMWKSNVDMEYMCLTCHYIDNDWRFQKKILAFLPVESLSTGEEISKAIVQSMCDWNIDRKVSSLLLDNCSFDDVVANELLKFLRPKGSLHLNGDMLHVHSCAHVLSLIVQDGLELISELINKVRDCIQYVKSSQARLAKFQDAVKQVGAPKKPIIIDIPSSWTSTYVMLETACEFQSAFTWLASNDDEYLPLSPKDWGDVKAVTECLDVFYQSILKFSTIRIPTANLYFNDICGIHLLLKTSCLSQYPIIISMAKGMLGKFQERWGTTRMVMAIASILDPRYKMKSVEYFFQKIYGDTFDAKDKIENIRKTLVTLYNEYALQSTHASSNQTFLCYAGDNSSCASNECNAGAESKNSTRITLSDARRGLDQYLQEVSSSQSMKSDLDMYLDEAVHPSKEGPDESFNILAWWKFNAAKYPVLSMMAHDILGIPVNIPLDNDGRVLNQYLSSTEPATVQALVCAQDWLKVDIEAGNLDGDVCMPLVPVNGDEFSPLSK
SIO_010081: LOC120251608
subclass of: SO_0000673
so part of: LOC120251608
location: join(524408..524418,524513..526491,526595..526671)
location: region:524408-526671:1
so has part: feature:524408-524418:1:exon
so has part: feature:524513-526491:1:exon
so has part: feature:526595-526671:1:exon

XP_039116124.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:524408-524418:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:524513-526491:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:526595-526671:1:exon

LOC120251608
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 55577
gene: LOC120251608
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger BED domain-containing protein RICESLEEPER 1-like isoform X1
translation: MIICMPESMEMDGKDRNVEASHKSHNPRSRKLRSLVWNDFTKEQRADGTYIAICNHCKKHLTASSRSGTTHLKNHLGVCMSSKRTKRKKLVVRRLALKSAEAKNDGKTGGADCFQFDQELSEQDLARMIVLHGYPFGIIQHTGFKTFLRNLQPQFKLVSFETLKADCLRIYESARLKLQEVLGKLTCRVSLSVDMWKSNVDMEYMCLTCHYIDNDWRFQKKILAFLPVESLSTGEEISKAIVQSMCDWNIDRKVSSLLLDNCSFDDVVANELLKFLRPKGSLHLNGDMLHVHSCAHVLSLIVQDGLELISELINKVRDCIQYVKSSQARLAKFQDAVKQVGAPKKPIIIDIPSSWTSTYVMLETACEFQSAFTWLASNDDEYLPLSPKDWGDVKAVTECLDVFYQSILKFSTIRIPTANLYFNDICGIHLLLKTSCLSQYPIIISMAKGMLGKFQERWGTTRMVMAIASILDPRYKMKSVEYFFQKIYGDTFDAKDKIENIRKTLVTLYNEYALQSTHASSNQTFLCYAGDNSSCASNECNAGAESKNSTRITLSDARRGLDQYLQEVSSSQSMKSDLDMYLDEAVHPSKEGPDESFNILAWWKFNAAKYPVLSMMAHDILGIPVNIPLDNDGRVLNQYLSSTEPATVQALVCAQDWLKVDIEAGNLDGDVCMPLVPVNGDEFSPLSK
SIO_010081: LOC120251608
subclass of: SO_0000673
so part of: LOC120251608
location: join(524408..524418,524513..526491,526595..526671)
location: region:524408-526671:1
so has part: feature:524408-524418:1:exon
so has part: feature:524513-526491:1:exon
so has part: feature:526595-526671:1:exon

XP_039116125.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:524408-524418:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:524513-526491:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:526595-526671:1:exon

LOC120251608
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 55577
gene: LOC120251608
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger BED domain-containing protein RICESLEEPER 1-like isoform X1
translation: MIICMPESMEMDGKDRNVEASHKSHNPRSRKLRSLVWNDFTKEQRADGTYIAICNHCKKHLTASSRSGTTHLKNHLGVCMSSKRTKRKKLVVRRLALKSAEAKNDGKTGGADCFQFDQELSEQDLARMIVLHGYPFGIIQHTGFKTFLRNLQPQFKLVSFETLKADCLRIYESARLKLQEVLGKLTCRVSLSVDMWKSNVDMEYMCLTCHYIDNDWRFQKKILAFLPVESLSTGEEISKAIVQSMCDWNIDRKVSSLLLDNCSFDDVVANELLKFLRPKGSLHLNGDMLHVHSCAHVLSLIVQDGLELISELINKVRDCIQYVKSSQARLAKFQDAVKQVGAPKKPIIIDIPSSWTSTYVMLETACEFQSAFTWLASNDDEYLPLSPKDWGDVKAVTECLDVFYQSILKFSTIRIPTANLYFNDICGIHLLLKTSCLSQYPIIISMAKGMLGKFQERWGTTRMVMAIASILDPRYKMKSVEYFFQKIYGDTFDAKDKIENIRKTLVTLYNEYALQSTHASSNQTFLCYAGDNSSCASNECNAGAESKNSTRITLSDARRGLDQYLQEVSSSQSMKSDLDMYLDEAVHPSKEGPDESFNILAWWKFNAAKYPVLSMMAHDILGIPVNIPLDNDGRVLNQYLSSTEPATVQALVCAQDWLKVDIEAGNLDGDVCMPLVPVNGDEFSPLSK
SIO_010081: LOC120251608
subclass of: SO_0000673
so part of: LOC120251608
location: join(524408..524418,524513..526491,526595..526671)
location: region:524408-526671:1
so has part: feature:524408-524418:1:exon
so has part: feature:524513-526491:1:exon
so has part: feature:526595-526671:1:exon

XP_039116126.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:524408-524418:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:524513-526491:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:526595-526671:1:exon

LOC120251608
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 55577
gene: LOC120251608
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger BED domain-containing protein RICESLEEPER 1-like isoform X1
translation: MIICMPESMEMDGKDRNVEASHKSHNPRSRKLRSLVWNDFTKEQRADGTYIAICNHCKKHLTASSRSGTTHLKNHLGVCMSSKRTKRKKLVVRRLALKSAEAKNDGKTGGADCFQFDQELSEQDLARMIVLHGYPFGIIQHTGFKTFLRNLQPQFKLVSFETLKADCLRIYESARLKLQEVLGKLTCRVSLSVDMWKSNVDMEYMCLTCHYIDNDWRFQKKILAFLPVESLSTGEEISKAIVQSMCDWNIDRKVSSLLLDNCSFDDVVANELLKFLRPKGSLHLNGDMLHVHSCAHVLSLIVQDGLELISELINKVRDCIQYVKSSQARLAKFQDAVKQVGAPKKPIIIDIPSSWTSTYVMLETACEFQSAFTWLASNDDEYLPLSPKDWGDVKAVTECLDVFYQSILKFSTIRIPTANLYFNDICGIHLLLKTSCLSQYPIIISMAKGMLGKFQERWGTTRMVMAIASILDPRYKMKSVEYFFQKIYGDTFDAKDKIENIRKTLVTLYNEYALQSTHASSNQTFLCYAGDNSSCASNECNAGAESKNSTRITLSDARRGLDQYLQEVSSSQSMKSDLDMYLDEAVHPSKEGPDESFNILAWWKFNAAKYPVLSMMAHDILGIPVNIPLDNDGRVLNQYLSSTEPATVQALVCAQDWLKVDIEAGNLDGDVCMPLVPVNGDEFSPLSK
SIO_010081: LOC120251608
subclass of: SO_0000673
so part of: LOC120251608
location: join(524408..524418,524513..526491,526595..526671)
location: region:524408-526671:1
so has part: feature:524408-524418:1:exon
so has part: feature:524513-526491:1:exon
so has part: feature:526595-526671:1:exon

XP_039116127.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:524408-524418:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:524513-526491:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:526595-526671:1:exon

LOC120251608
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 55577
gene: LOC120251608
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger BED domain-containing protein RICESLEEPER 1-like isoform X3
translation: MIICMPESMEMDGKDRNVEASHKSHNPRSRKLRSLVWNDFTKEQRADGTYIAICNHCKKHLTASSRSGTTHLKNHLGVCMSSKRTKRKKLVVRRLALKSAEAKNDGKTGGADCFQFDQELSEQDLARMIVLHGYPFGIIQHTGFKTFLRNLQPQFKLVSFETLKADCLRIYESARLKLQEVLGKLTCRVSLSVDMWKSNVDMEYMCLTCHYIDNDWRFQKKILAFLPVESLSTGEEISKAIVQSMCDWNIDRKVSSLLLDNCSFDDVVANELLKFLRPKGSLHLNGDMLHVHSCAHVLSLIVQDGLELISELINKVRDCIQYVKSSQARLAKFQDAVKQVGAPKKPIIIDIPSSWTSTYVMLETACEFQSAFTWLASNDDEYLPLSPKDWGDVKAVTECLDVFYQSILKFSTIRIPTANLYFNDICGIHLLLKTSCLSQYPIIISMAKGMLGKFQERWGTTRMVMAIASILDPRYKMKSVEYFFQKIYGDTFDAKDKIENIRKTLVTLYNEYALQSTHASSNQTFLCYAGDNSSCASNECNAGAESKNSTRITLSDARRGLDQYLQEVSSSQSMKSDLDMYLDEAVHPSKEGPDESFNILAWWKFNAAKYPVLSMMAHDILGIPVNIPLDNDGRVLNQYLSSTEPATVQALVCAQDWLKVDIEDEFSHI
SIO_010081: LOC120251608
subclass of: SO_0000673
so part of: LOC120251608
location: join(524408..524418,524513..526491,526571..526590)
location: region:524408-526590:1
so has part: feature:524408-524418:1:exon
so has part: feature:524513-526491:1:exon
so has part: feature:526571-526590:1:exon

XP_039116129.1
type: Protein
SIO_000068: ncbiprotein

position:526590:1
position: 526590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:524408-524418:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:524513-526491:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:526571-526590:1:exon

LOC120251608
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 55577
gene: LOC120251608
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger BED domain-containing protein RICESLEEPER 1-like isoform X2
translation: MPESMEMDGKDRNVEASHKSHNPRSRKLRSLVWNDFTKEQRADGTYIAICNHCKKHLTASSRSGTTHLKNHLGVCMSSKRTKRKKLVVRRLALKSAEAKNDGKTGGADCFQFDQELSEQDLARMIVLHGYPFGIIQHTGFKTFLRNLQPQFKLVSFETLKADCLRIYESARLKLQEVLGKLTCRVSLSVDMWKSNVDMEYMCLTCHYIDNDWRFQKKILAFLPVESLSTGEEISKAIVQSMCDWNIDRKVSSLLLDNCSFDDVVANELLKFLRPKGSLHLNGDMLHVHSCAHVLSLIVQDGLELISELINKVRDCIQYVKSSQARLAKFQDAVKQVGAPKKPIIIDIPSSWTSTYVMLETACEFQSAFTWLASNDDEYLPLSPKDWGDVKAVTECLDVFYQSILKFSTIRIPTANLYFNDICGIHLLLKTSCLSQYPIIISMAKGMLGKFQERWGTTRMVMAIASILDPRYKMKSVEYFFQKIYGDTFDAKDKIENIRKTLVTLYNEYALQSTHASSNQTFLCYAGDNSSCASNECNAGAESKNSTRITLSDARRGLDQYLQEVSSSQSMKSDLDMYLDEAVHPSKEGPDESFNILAWWKFNAAKYPVLSMMAHDILGIPVNIPLDNDGRVLNQYLSSTEPATVQALVCAQDWLKVDIEAGNLDGDVCMPLVPVNGDEFSPLSK
SIO_010081: LOC120251608
subclass of: SO_0000673
so part of: LOC120251608
location: join(524514..526491,526595..526671)
location: region:524514-526671:1
so has part: feature:524514-526491:1:exon
so has part: feature:526595-526671:1:exon

XP_039116128.1
type: Protein
SIO_000068: ncbiprotein

position:524514:1
position: 524514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:524514-526491:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:526595-526671:1:exon

LOC120252148
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252148
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 677570..677675
location: region:677570-677675:1
so has part: feature:677570-677675:1:exon
subclass of: SO_0000578

120252148
type: Gene
SIO_000068: ncbigene

position:677570:1
position: 677570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:677675:1
position: 677675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:677570-677675:1:exon

LOC120252148
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252148
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533694.1
SIO_010081: LOC120252148
subclass of: SO_0000673
so part of: LOC120252148
location: 677570..677675
location: region:677570-677675:1
so has part: feature:677570-677675:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:677570-677675:1:exon

LOC120252455
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252455
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(741514..741652)
location: region:741514-741652:-1
so has part: feature:741514-741652:-1:exon
subclass of: SO_0000578

120252455
type: Gene
SIO_000068: ncbigene

position:741514:-1
position: 741514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:741652:-1
position: 741652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:741514-741652:-1:exon

LOC120252455
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252455
product: small nucleolar RNA Z247
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00321
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533988.1
SIO_010081: LOC120252455
subclass of: SO_0000673
so part of: LOC120252455
location: complement(741514..741652)
location: region:741514-741652:-1
so has part: feature:741514-741652:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:741514-741652:-1:exon

LOC120252315
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252315
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 806223..806329
location: region:806223-806329:1
so has part: feature:806223-806329:1:exon
subclass of: SO_0000578

120252315
type: Gene
SIO_000068: ncbigene

position:806223:1
position: 806223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:806329:1
position: 806329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:806223-806329:1:exon

LOC120252315
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252315
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533856.1
SIO_010081: LOC120252315
subclass of: SO_0000673
so part of: LOC120252315
location: 806223..806329
location: region:806223-806329:1
so has part: feature:806223-806329:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:806223-806329:1:exon

LOC120251847
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120251847
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(859505..871623)
location: region:859505-871623:-1
so has part: feature:859505-871623:-1:exon
subclass of: SO_0000010

120251847
type: Gene
SIO_000068: ncbigene

position:859505:-1
position: 859505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:871623:-1
position: 871623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:859505-871623:-1:exon

LOC120251847
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 55577
gene: LOC120251847
product: UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 80% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_039260503.1
SIO_010081: LOC120251847
subclass of: SO_0000673
so part of: LOC120251847
location: complement(join(859505..859826,860051..860187,867758..867865,870692..871623))
location: region:859505-871623:-1
so has part: feature:870692-871623:-1:exon
so has part: feature:867758-867865:-1:exon
so has part: feature:860051-860187:-1:exon
so has part: feature:859505-859826:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:870692-871623:-1:exon

position:870692:-1
position: 870692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:867758-867865:-1:exon

position:867758:-1
position: 867758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:867865:-1
position: 867865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:860051-860187:-1:exon

position:860051:-1
position: 860051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:860187:-1
position: 860187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:859505-859826:-1:exon

position:859826:-1
position: 859826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120251847
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 55577
gene: LOC120251847
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase-like
translation: MASSPLNLLLLSLLLLPKHPLLNPQPPPPPPRPPRRSQIPHLLSCSSPIQLRLRPPVLSSPAVAPAATSTQRSPQPTSSRMPTLTLRSSSSAQNPAWRAKSSPLPAMTTPPIPSARLFRPFLNPVNLLLPFSLLRSIFISWTILRRFRPQIVLGTGSYVAAPVCFAAALAGIKFVIQEQNSFPGLTNRSLAPYAEKIFLAFNACVKYFPKEKCVVSGNPVRLALRRYVSKAVARSHFFPKASAKNGDEKAQVVLVLGGSSGAYALNIAVLNMYYEMLLEHKNRYIIWQTGADGYNEMESLVKNNRRLLLTPFLHSMDLAYAAADVVVSRAGAMTCTEILTTGKPSILIPSPTVADDHQTKNAYIMADVAGSKVIPQDELDSSCLEIAINEVLGDEKLMAEMSEKALSVARPNASAEIAQDMLSLIRVSAP
SIO_010081: LOC120251847
subclass of: SO_0000673
so part of: LOC120251847
location: complement(join(859711..859826,860051..860187,867758..867865,870692..871623))
location: region:859711-871623:-1
so has part: feature:870692-871623:-1:exon
so has part: feature:867758-867865:-1:exon
so has part: feature:860051-860187:-1:exon
so has part: feature:859711-859826:-1:exon

XP_039116437.1
type: Protein
SIO_000068: ncbiprotein

position:859711:-1
position: 859711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:870692-871623:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:867758-867865:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:860051-860187:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:859711-859826:-1:exon

LOC120251966
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120251966
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(881723..884765)
location: region:881723-884765:-1
so has part: feature:881723-884765:-1:exon
subclass of: SO_0000010

120251966
type: Gene
SIO_000068: ncbigene

position:881723:-1
position: 881723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:884765:-1
position: 884765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:881723-884765:-1:exon

LOC120251966
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 55577
gene: LOC120251966
product: receptor protein kinase-like protein ZAR1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_039260619.1
SIO_010081: LOC120251966
subclass of: SO_0000673
so part of: LOC120251966
location: complement(join(881723..882575,883111..884765))
location: region:881723-884765:-1
so has part: feature:883111-884765:-1:exon
so has part: feature:881723-882575:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:883111-884765:-1:exon

position:883111:-1
position: 883111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:881723-882575:-1:exon

position:882575:-1
position: 882575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120251966
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 55577
gene: LOC120251966
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: receptor protein kinase-like protein ZAR1
translation: MSVYVLLLLIIVPAVSGLNLTNEEVTALLSFKSSVSYDPDDSLSNWNSSIDENPCSWDGITCKQGKVVSLSIPRKGLVGYLPAALGSLSSLRHLNLRSNRLFGNLPLELFFVKSLQSLVLYGNSLSGPLPQEISNFTSLQNLDLSHNLFKGLIPSSLIRCQRLRSLHLSNNNFSGPLPNGFGRSLVFLERLDLSFNSLNGSIPGDIGELSSLQGTVDLSHNLFSGLIPPSLGNVPDNVYIDLSFNNLSGLIPQNGALVNRGPTAFIGNPALCGPPLKRPCSSSSVVVSSPSSPLPFQPNNYQPMSSVPNNGVSDNHRGMSKGLVIAIIISDVIVLFVIAFVFFYCYKRATSSLRKEKVEEIASNNNKGNNSRKECRCFFAKGESETISEDTEQIDLVPLDDLVRFDIDELLKASAFVLGKSWMGIVYKVVLEDGLNLAVRRLGEGSSQRLKEFKTEVEAIGKIRHPCIVSLRAYYWSNEEKLLIYDYITNGNLSAAIHGTPGMVEFKPMSWTMRLNIMRGIAQGLAFLHEFSPKKCVHGDLRPNNILLGQNMEPYISDLGLNRLVNIVRGSSLLPSERMNADKPQIQQTDVPGSPAPKLGSCYHAPETLRTLKPSQKWDVYSYGVILMEMISGRPPMVLLDTSEVDLVKWVEFCIEQKRPLADLLDPQLVPELQKENEMVYVLKIALACVQINAERRPSMRNVVDTLDKLTHVK
SIO_010081: LOC120251966
subclass of: SO_0000673
so part of: LOC120251966
location: complement(join(881926..882575,883111..884605))
location: region:881926-884605:-1
so has part: feature:883111-884605:-1:exon
so has part: feature:881926-882575:-1:exon

XP_039116553.1
type: Protein
SIO_000068: ncbiprotein

position:881926:-1
position: 881926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:884605:-1
position: 884605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:883111-884605:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:881926-882575:-1:exon

LOC120251848
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120251848
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(943314..944390)
location: region:943314-944390:-1
so has part: feature:943314-944390:-1:exon
subclass of: SO_0000010

120251848
type: Gene
SIO_000068: ncbigene

position:943314:-1
position: 943314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:944390:-1
position: 944390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:943314-944390:-1:exon

LOC120251848
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 55577
gene: LOC120251848
product: uncharacterized LOC120251848
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_039260504.1
SIO_010081: LOC120251848
subclass of: SO_0000673
so part of: LOC120251848
location: complement(943314..944390)
location: region:943314-944390:-1
so has part: feature:943314-944390:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:943314-944390:-1:exon

LOC120251848
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 55577
gene: LOC120251848
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC120251848
translation: MANMLIERQQGNLPSTSEANPRKSGNEQCSAITLRRGKELKMPEKKSESVDQKHDQDNLEHNKFESQIEAPLPQDRFTRIPFPQRLKKNKLDQQFAKLLDIFKKLHINIPFTEVLKQMPSYAMFMKEILSNKRKLKDYETVAILQKKFPPKLKDPGSFTIPCSIGNVVFERALCDLGASINLMPLSIFKKLNFGETRPTTVTLQLADRSLKHPRGVIEDVLVKIDKFIFLTDFIVLDIEEDKDIPIILGRPFLATERAIIDVQKGELHLRVQEEEVTFNVFDAIKYPQASECCFRIDEKNLLQLIEFDEFRNEAYKDDITNKKQTKARHGKFKMKWCGPFTINKMLPYGVAEVTHSEK
SIO_010081: LOC120251848
subclass of: SO_0000673
so part of: LOC120251848
location: complement(943314..944390)
location: region:943314-944390:-1
so has part: feature:943314-944390:-1:exon

XP_039116438.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:943314-944390:-1:exon

LOC120251974
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120251974
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 945037..945143
location: region:945037-945143:1
so has part: feature:945037-945143:1:exon
subclass of: SO_0000578

120251974
type: Gene
SIO_000068: ncbigene

position:945037:1
position: 945037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:945143:1
position: 945143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:945037-945143:1:exon

LOC120251974
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120251974
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533534.1
SIO_010081: LOC120251974
subclass of: SO_0000673
so part of: LOC120251974
location: 945037..945143
location: region:945037-945143:1
so has part: feature:945037-945143:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:945037-945143:1:exon

LOC120251832
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120251832
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(946745..948817)
location: region:946745-948817:-1
so has part: feature:946745-948817:-1:exon
subclass of: SO_0000010

120251832
type: Gene
SIO_000068: ncbigene

position:946745:-1
position: 946745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:948817:-1
position: 948817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:946745-948817:-1:exon

LOC120251832
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 55577
gene: LOC120251832
product: protein PLASTID MOVEMENT IMPAIRED 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_039260488.1
SIO_010081: LOC120251832
subclass of: SO_0000673
so part of: LOC120251832
location: complement(join(946745..946929,947220..948817))
location: region:946745-948817:-1
so has part: feature:947220-948817:-1:exon
so has part: feature:946745-946929:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:947220-948817:-1:exon

position:947220:-1
position: 947220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:946745-946929:-1:exon

position:946929:-1
position: 946929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120251832
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 55577
gene: LOC120251832
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein PLASTID MOVEMENT IMPAIRED 2-like
translation: MNSPKIMMNSQPLDYVQVMHELDRVKHELSKLKLEVSSAIEAKANAESEIKASGSKVRTMEACAEDLQKEIEHINEEHVLVELARMEAERELQQIESQRLAEFSRYSKSIEEANNRIKGLRKEIRQTQELERSLAVTTADVDVLQNEMVLVRAMEKNFSKSNSMSNDEQKKEEQTRRELRNVEAELEVAKKELASYKYQGFQFMSAMDLIRKELIEIFKEKEQIEKNEKKTDSAVRNLNYKLLKAKSQLESALVADTRAKEIVANLSAALQQMKIDTEAVRREREQISEESRSIKIEMKSEETINSDNERLLTTMKELEAAKKAEESALKKLKTVAERAMRNRVCTQLHGSRITISSSEYEYLTSGAAATMDVANKKVAAILAWIEALKAEEKEMSLKIERTKSDIEELHKKKETMVDQMRTVEEDIDRSEAEAFHAQANVSVSQTRKSIKDNGFATSKRRAKIRRSSASSITRLPSRSPSFTIKKRGRVMPTFVLFLRRKRIIRQK
SIO_010081: LOC120251832
subclass of: SO_0000673
so part of: LOC120251832
location: complement(947227..948750)
location: region:947227-948750:-1
so has part: feature:947227-948750:-1:exon

XP_039116422.1
type: Protein
SIO_000068: ncbiprotein

position:947227:-1
position: 947227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:948750:-1
position: 948750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:947227-948750:-1:exon

LOC120251850
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120251850
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(948815..949365)
location: region:948815-949365:-1
so has part: feature:948815-949365:-1:exon
subclass of: SO_0000010

120251850
type: Gene
SIO_000068: ncbigene

position:948815:-1
position: 948815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:949365:-1
position: 949365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:948815-949365:-1:exon

LOC120251850
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 55577
gene: LOC120251850
product: uncharacterized LOC120251850
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 88% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_039260505.1
SIO_010081: LOC120251850
subclass of: SO_0000673
so part of: LOC120251850
location: complement(join(948815..948952,949097..949166,949244..949365))
location: region:948815-949365:-1
so has part: feature:949244-949365:-1:exon
so has part: feature:949097-949166:-1:exon
so has part: feature:948815-948952:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:949244-949365:-1:exon

position:949244:-1
position: 949244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:949097-949166:-1:exon

position:949097:-1
position: 949097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:949166:-1
position: 949166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:948815-948952:-1:exon

position:948952:-1
position: 948952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120251850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 55577
gene: LOC120251850
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC120251850
translation: MRDLFLQKRYSLIVQLPSFISPNCEARTNKGLQQIGYSLVRTRSGSPERTSSVREAINLFGEKMELATKRAREIHVAKMDIGRLCENKKCAEDDKARAESELYMARGWQ
SIO_010081: LOC120251850
subclass of: SO_0000673
so part of: LOC120251850
location: complement(join(948815..948952,949097..949166,949244..949365))
location: region:948815-949365:-1
so has part: feature:949244-949365:-1:exon
so has part: feature:949097-949166:-1:exon
so has part: feature:948815-948952:-1:exon

XP_039116439.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:949244-949365:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:949097-949166:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:948815-948952:-1:exon

LOC120252070
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252070
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(969684..969790)
location: region:969684-969790:-1
so has part: feature:969684-969790:-1:exon
subclass of: SO_0000578

120252070
type: Gene
SIO_000068: ncbigene

position:969684:-1
position: 969684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:969790:-1
position: 969790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:969684-969790:-1:exon

LOC120252070
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252070
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533621.1
SIO_010081: LOC120252070
subclass of: SO_0000673
so part of: LOC120252070
location: complement(969684..969790)
location: region:969684-969790:-1
so has part: feature:969684-969790:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:969684-969790:-1:exon

LOC120252145
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252145
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 1013988..1014094
location: region:1013988-1014094:1
so has part: feature:1013988-1014094:1:exon
subclass of: SO_0000578

120252145
type: Gene
SIO_000068: ncbigene

position:1013988:1
position: 1013988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1014094:1
position: 1014094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1013988-1014094:1:exon

LOC120252145
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252145
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533691.1
SIO_010081: LOC120252145
subclass of: SO_0000673
so part of: LOC120252145
location: 1013988..1014094
location: region:1013988-1014094:1
so has part: feature:1013988-1014094:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1013988-1014094:1:exon

LOC120252164
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252164
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 1047191..1047297
location: region:1047191-1047297:1
so has part: feature:1047191-1047297:1:exon
subclass of: SO_0000578

120252164
type: Gene
SIO_000068: ncbigene

position:1047191:1
position: 1047191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1047297:1
position: 1047297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1047191-1047297:1:exon

LOC120252164
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252164
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533709.1
SIO_010081: LOC120252164
subclass of: SO_0000673
so part of: LOC120252164
location: 1047191..1047297
location: region:1047191-1047297:1
so has part: feature:1047191-1047297:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1047191-1047297:1:exon

LOC120252049
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252049
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 1059520..1059626
location: region:1059520-1059626:1
so has part: feature:1059520-1059626:1:exon
subclass of: SO_0000578

120252049
type: Gene
SIO_000068: ncbigene

position:1059520:1
position: 1059520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1059626:1
position: 1059626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1059520-1059626:1:exon

LOC120252049
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252049
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533601.1
SIO_010081: LOC120252049
subclass of: SO_0000673
so part of: LOC120252049
location: 1059520..1059626
location: region:1059520-1059626:1
so has part: feature:1059520-1059626:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1059520-1059626:1:exon

LOC120252217
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252217
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(1079614..1079720)
location: region:1079614-1079720:-1
so has part: feature:1079614-1079720:-1:exon
subclass of: SO_0000578

120252217
type: Gene
SIO_000068: ncbigene

position:1079614:-1
position: 1079614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1079720:-1
position: 1079720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1079614-1079720:-1:exon

LOC120252217
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252217
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533758.1
SIO_010081: LOC120252217
subclass of: SO_0000673
so part of: LOC120252217
location: complement(1079614..1079720)
location: region:1079614-1079720:-1
so has part: feature:1079614-1079720:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1079614-1079720:-1:exon

LOC120252220
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252220
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 1114499..1114605
location: region:1114499-1114605:1
so has part: feature:1114499-1114605:1:exon
subclass of: SO_0000578

120252220
type: Gene
SIO_000068: ncbigene

position:1114499:1
position: 1114499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1114605:1
position: 1114605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1114499-1114605:1:exon

LOC120252220
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252220
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533762.1
SIO_010081: LOC120252220
subclass of: SO_0000673
so part of: LOC120252220
location: 1114499..1114605
location: region:1114499-1114605:1
so has part: feature:1114499-1114605:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1114499-1114605:1:exon

LOC120252114
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252114
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(1150289..1150395)
location: region:1150289-1150395:-1
so has part: feature:1150289-1150395:-1:exon
subclass of: SO_0000578

120252114
type: Gene
SIO_000068: ncbigene

position:1150289:-1
position: 1150289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1150395:-1
position: 1150395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1150289-1150395:-1:exon

LOC120252114
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252114
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533662.1
SIO_010081: LOC120252114
subclass of: SO_0000673
so part of: LOC120252114
location: complement(1150289..1150395)
location: region:1150289-1150395:-1
so has part: feature:1150289-1150395:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1150289-1150395:-1:exon

LOC120252203
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252203
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 1203593..1203699
location: region:1203593-1203699:1
so has part: feature:1203593-1203699:1:exon
subclass of: SO_0000578

120252203
type: Gene
SIO_000068: ncbigene

position:1203593:1
position: 1203593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1203699:1
position: 1203699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1203593-1203699:1:exon

LOC120252203
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252203
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533744.1
SIO_010081: LOC120252203
subclass of: SO_0000673
so part of: LOC120252203
location: 1203593..1203699
location: region:1203593-1203699:1
so has part: feature:1203593-1203699:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1203593-1203699:1:exon

LOC120251851
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120251851
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1224739..1227913)
location: region:1224739-1227913:-1
so has part: feature:1224739-1227913:-1:exon
subclass of: SO_0000010

120251851
type: Gene
SIO_000068: ncbigene

position:1224739:-1
position: 1224739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1227913:-1
position: 1227913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1224739-1227913:-1:exon

LOC120251851
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 55577
gene: LOC120251851
product: uncharacterized LOC120251851
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_039260506.1
SIO_010081: LOC120251851
subclass of: SO_0000673
so part of: LOC120251851
location: complement(join(1224739..1224933,1225052..1225110,1225282..1225505,1225590..1226996,1227042..1227913))
location: region:1224739-1227913:-1
so has part: feature:1227042-1227913:-1:exon
so has part: feature:1225590-1226996:-1:exon
so has part: feature:1225282-1225505:-1:exon
so has part: feature:1225052-1225110:-1:exon
so has part: feature:1224739-1224933:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1227042-1227913:-1:exon

position:1227042:-1
position: 1227042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1225590-1226996:-1:exon

position:1225590:-1
position: 1225590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1226996:-1
position: 1226996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1225282-1225505:-1:exon

position:1225282:-1
position: 1225282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1225505:-1
position: 1225505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1225052-1225110:-1:exon

position:1225052:-1
position: 1225052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1225110:-1
position: 1225110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1224739-1224933:-1:exon

position:1224933:-1
position: 1224933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120251851
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 55577
gene: LOC120251851
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC120251851
translation: MDKSWITKPRNSLVYDQGVKTFIEFAFQHGAVNDMILCPCPTCGFSKRQKRAEVYDHLICKPYPKGYPIWHLHGESHPNETTNVEFSNNVASQSNIFVHDPIRDMVNDAFGVHDQSEEASPTLNEEGIHDNNATPNLNQHQSVADDFYDLSNDGQQPLYEGCANHSKLSFTLKLYHIKCLCGMSDKAMTMILELLNDAFPNIKIPRSFYDAKKTITKLGLNYEKIHACPNNCMLYWGNTEDEERQICKVCSTSRWKMKNDRSNDNSGNNRGRRKIPAKLVRYFPLKPRLQRSDTNVDGLLRHPRDCEAWKKFDLINSHFAADPRNVRLALATDGFNPYGSMNQSYSIWPIVLIPYNLPPWMCMKQASFIISTIIPGKQMPGNDIDVYLQPLIRELKELWCNGVNTYDSFKKEMFKMHAALLWTISDYPGLGNLSGWNVYTGRACVHCNYASDPCRLPYSRKWCFMGHRRFLATGHKFRLNKIRFNGEQELRNPPKILSGTEILQQVQDINITFGRLLDNQSAGKRRRGASTSRTEPQQWKKKSIFFELPYWEHNLIRHNLDVMHIEKNVCDNVLFTLLNDSSRSKDHVNACKDLKHMCCKPDLWPDDNGKFAAVVYTMNKQGKKLFLDTLKNICVPDGYASNISRCIDTTNLKIVGTLKSHDSHVLLQQFLPLAMREGLHDNVSAVLLELCSFFRQISGKVLSVTELDKFQDQIIVTLCHMEMLFPPSFFTLMIHLVVHLVDEAKLGSPVYYRWMYPIEMYLGILKSYVRNKARPEGSIAEDYIAQEVLTFCSRYFENIETIWNRPRRVDDEPAISQHPNARIAELFPYVGKEIGSSELLQRRQLRTRSRNPIEINRDHDKIQDYDKSLLLALVQGPINQAKRYSAYNVNGYKFRTLEREKGLKTQNSGVFGTFGTRS
SIO_010081: LOC120251851
subclass of: SO_0000673
so part of: LOC120251851
location: complement(join(1224739..1224933,1225052..1225110,1225282..1225505,1225590..1226996,1227042..1227913))
location: region:1224739-1227913:-1
so has part: feature:1227042-1227913:-1:exon
so has part: feature:1225590-1226996:-1:exon
so has part: feature:1225282-1225505:-1:exon
so has part: feature:1225052-1225110:-1:exon
so has part: feature:1224739-1224933:-1:exon

XP_039116440.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1227042-1227913:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1225590-1226996:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1225282-1225505:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1225052-1225110:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1224739-1224933:-1:exon

LOC120252165
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252165
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 1254943..1255049
location: region:1254943-1255049:1
so has part: feature:1254943-1255049:1:exon
subclass of: SO_0000578

120252165
type: Gene
SIO_000068: ncbigene

position:1254943:1
position: 1254943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1255049:1
position: 1255049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1254943-1255049:1:exon

LOC120252165
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252165
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533710.1
SIO_010081: LOC120252165
subclass of: SO_0000673
so part of: LOC120252165
location: 1254943..1255049
location: region:1254943-1255049:1
so has part: feature:1254943-1255049:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1254943-1255049:1:exon

LOC120252198
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252198
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(1336140..1336246)
location: region:1336140-1336246:-1
so has part: feature:1336140-1336246:-1:exon
subclass of: SO_0000578

120252198
type: Gene
SIO_000068: ncbigene

position:1336140:-1
position: 1336140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1336246:-1
position: 1336246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1336140-1336246:-1:exon

LOC120252198
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252198
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533739.1
SIO_010081: LOC120252198
subclass of: SO_0000673
so part of: LOC120252198
location: complement(1336140..1336246)
location: region:1336140-1336246:-1
so has part: feature:1336140-1336246:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1336140-1336246:-1:exon

LOC120252201
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252201
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 1390780..1390886
location: region:1390780-1390886:1
so has part: feature:1390780-1390886:1:exon
subclass of: SO_0000578

120252201
type: Gene
SIO_000068: ncbigene

position:1390780:1
position: 1390780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1390886:1
position: 1390886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1390780-1390886:1:exon

LOC120252201
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252201
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533742.1
SIO_010081: LOC120252201
subclass of: SO_0000673
so part of: LOC120252201
location: 1390780..1390886
location: region:1390780-1390886:1
so has part: feature:1390780-1390886:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1390780-1390886:1:exon

LOC120251142
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120251142
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 1421423..1427403
location: region:1421423-1427403:1
so has part: feature:1421423-1427403:1:exon

120251142
type: Gene
SIO_000068: ncbigene

position:1421423:1
position: 1421423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1427403:1
position: 1427403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1421423-1427403:1:exon

LOC120251142
type: Exon
subclass of: SO_0000147
RO_0002162: 55577
gene: LOC120251142
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC120251142
subclass of: SO_0000673
so part of: LOC120251142
location: 1421423..1421847
location: region:1421423-1421847:1
so has part: feature:1421423-1421847:1:exon

position:1421847:1
position: 1421847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1421423-1421847:1:exon

LOC120251142
type: Exon
subclass of: SO_0000147
RO_0002162: 55577
gene: LOC120251142
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC120251142
subclass of: SO_0000673
so part of: LOC120251142
location: 1424116..1424217
location: region:1424116-1424217:1
so has part: feature:1424116-1424217:1:exon

position:1424116:1
position: 1424116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1424217:1
position: 1424217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1424116-1424217:1:exon

LOC120251142
type: Exon
subclass of: SO_0000147
RO_0002162: 55577
gene: LOC120251142
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC120251142
subclass of: SO_0000673
so part of: LOC120251142
location: 1424307..1424374
location: region:1424307-1424374:1
so has part: feature:1424307-1424374:1:exon

position:1424307:1
position: 1424307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1424374:1
position: 1424374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1424307-1424374:1:exon

LOC120251142
type: Exon
subclass of: SO_0000147
RO_0002162: 55577
gene: LOC120251142
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC120251142
subclass of: SO_0000673
so part of: LOC120251142
location: 1424629..1424713
location: region:1424629-1424713:1
so has part: feature:1424629-1424713:1:exon

position:1424629:1
position: 1424629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1424713:1
position: 1424713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1424629-1424713:1:exon

LOC120251142
type: Exon
subclass of: SO_0000147
RO_0002162: 55577
gene: LOC120251142
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC120251142
subclass of: SO_0000673
so part of: LOC120251142
location: 1424917..1425001
location: region:1424917-1425001:1
so has part: feature:1424917-1425001:1:exon

position:1424917:1
position: 1424917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1425001:1
position: 1425001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1424917-1425001:1:exon

LOC120251142
type: Exon
subclass of: SO_0000147
RO_0002162: 55577
gene: LOC120251142
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC120251142
subclass of: SO_0000673
so part of: LOC120251142
location: 1425586..1425717
location: region:1425586-1425717:1
so has part: feature:1425586-1425717:1:exon

position:1425586:1
position: 1425586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1425717:1
position: 1425717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1425586-1425717:1:exon

LOC120251142
type: Exon
subclass of: SO_0000147
RO_0002162: 55577
gene: LOC120251142
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC120251142
subclass of: SO_0000673
so part of: LOC120251142
location: 1426361..1426455
location: region:1426361-1426455:1
so has part: feature:1426361-1426455:1:exon

position:1426361:1
position: 1426361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1426455:1
position: 1426455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1426361-1426455:1:exon

LOC120251142
type: Exon
subclass of: SO_0000147
RO_0002162: 55577
gene: LOC120251142
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC120251142
subclass of: SO_0000673
so part of: LOC120251142
location: 1426918..1426996
location: region:1426918-1426996:1
so has part: feature:1426918-1426996:1:exon

position:1426918:1
position: 1426918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1426996:1
position: 1426996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1426918-1426996:1:exon

LOC120251142
type: Exon
subclass of: SO_0000147
RO_0002162: 55577
gene: LOC120251142
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC120251142
subclass of: SO_0000673
so part of: LOC120251142
location: 1427100..1427182
location: region:1427100-1427182:1
so has part: feature:1427100-1427182:1:exon

position:1427100:1
position: 1427100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1427182:1
position: 1427182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1427100-1427182:1:exon

LOC120251142
type: Exon
subclass of: SO_0000147
RO_0002162: 55577
gene: LOC120251142
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC120251142
subclass of: SO_0000673
so part of: LOC120251142
location: 1427316..1427403
location: region:1427316-1427403:1
so has part: feature:1427316-1427403:1:exon

position:1427316:1
position: 1427316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1427316-1427403:1:exon

LOC120251853
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120251853
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1462331..1484478
location: region:1462331-1484478:1
so has part: feature:1462331-1484478:1:exon
subclass of: SO_0000010

120251853
type: Gene
SIO_000068: ncbigene

position:1462331:1
position: 1462331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1484478:1
position: 1484478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1462331-1484478:1:exon

LOC120251853
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 55577
gene: LOC120251853
product: uncharacterized LOC120251853
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_039260507.1
SIO_010081: LOC120251853
subclass of: SO_0000673
so part of: LOC120251853
location: join(1462331..1462455,1474514..1474721,1474817..1474949,1475064..1475101,1475312..1475402,1476275..1477825,1478954..1479085,1480629..1480701,1480830..1480868,1481053..1481165,1481700..1481765,1482104..1482181,1483036..1483208,1483502..1483548,1483650..1483878,1483983..1484478)
location: region:1462331-1484478:1
so has part: feature:1462331-1462455:1:exon
so has part: feature:1474514-1474721:1:exon
so has part: feature:1474817-1474949:1:exon
so has part: feature:1475064-1475101:1:exon
so has part: feature:1475312-1475402:1:exon
so has part: feature:1476275-1477825:1:exon
so has part: feature:1478954-1479085:1:exon
so has part: feature:1480629-1480701:1:exon
so has part: feature:1480830-1480868:1:exon
so has part: feature:1481053-1481165:1:exon
so has part: feature:1481700-1481765:1:exon
so has part: feature:1482104-1482181:1:exon
so has part: feature:1483036-1483208:1:exon
so has part: feature:1483502-1483548:1:exon
so has part: feature:1483650-1483878:1:exon
so has part: feature:1483983-1484478:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1462331-1462455:1:exon

position:1462455:1
position: 1462455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1474514-1474721:1:exon

position:1474514:1
position: 1474514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1474721:1
position: 1474721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1474817-1474949:1:exon

position:1474817:1
position: 1474817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1474949:1
position: 1474949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1475064-1475101:1:exon

position:1475064:1
position: 1475064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1475101:1
position: 1475101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1475312-1475402:1:exon

position:1475312:1
position: 1475312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1475402:1
position: 1475402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1476275-1477825:1:exon

position:1476275:1
position: 1476275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1477825:1
position: 1477825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1478954-1479085:1:exon

position:1478954:1
position: 1478954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1479085:1
position: 1479085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1480629-1480701:1:exon

position:1480629:1
position: 1480629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1480701:1
position: 1480701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1480830-1480868:1:exon

position:1480830:1
position: 1480830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1480868:1
position: 1480868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1481053-1481165:1:exon

position:1481053:1
position: 1481053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1481165:1
position: 1481165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1481700-1481765:1:exon

position:1481700:1
position: 1481700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1481765:1
position: 1481765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1482104-1482181:1:exon

position:1482104:1
position: 1482104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1482181:1
position: 1482181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1483036-1483208:1:exon

position:1483036:1
position: 1483036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1483208:1
position: 1483208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1483502-1483548:1:exon

position:1483502:1
position: 1483502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1483548:1
position: 1483548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1483650-1483878:1:exon

position:1483650:1
position: 1483650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1483878:1
position: 1483878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1483983-1484478:1:exon

position:1483983:1
position: 1483983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120251853
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 55577
gene: LOC120251853
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:1477049..1477051,aa:OTHER)
product: LOW QUALITY PROTEIN: uncharacterized protein LOC120251853
translation: MKEFQDQMGIDCHGNMKLGKQSPPGIAPFDHSIDGFFATMDSISALCGELSSEGYLLSQIERFSSMIMFLKEWRQFYYEPKVMNFSYESESGKVNDFSEGITLQQFSSASVSVPEMESLPQNVRSSSSDFVLHVGGFVWALDWCPRTDEKTEGQVNSEYLAVAAHPSGASYHKIGVPLVGRCLIQIWCLTSLDKKNELSQAKPKGRGRQKINLKQSETELSHELNQNEFSANRRKRGRHRKRQAEDDASCDSDNKKILHLPKPRGRPRKIEKLSTDDLTRGQILPARPRGRPRKHMNRGFNGPDSVNGLILGRFARTLESVDGREAPPSTDHVSLSTMHCASVLNVDAGDAPKRRERPRREPLSSTNKFHQESVFELQVDASGNGALTSTENCMAPLAHWFGEYCFTVGDFRQFNCXKESCVCSVDDIAACSVEVDIEAYGSNLISSRSDCLPCLNVDLQHVALPLTTSAGSIIKEKSFVSWFHGQPRESTISSANKGVLTPGVDIESNASGSSLTLKSNESMTPLNSHSGNATMFPTSGNTHAEEKSFVPRPGGRPIDQFIQSTSKTVSTSGADFKLFSNLELANSRENLISGDCQSELIVSDYCEGVTNGREETMSCSHIPENIALPRMVFSLAHNGKVAWDVKWRPKTSTKSEGKQHIGYLAVLLGSGSVEVWDMPHPSLVRRLYISSRIEGTDPRFIKLEPVFKCSKIKCGDRQCIPLTLEWSRSGSSDLMLAGCHDGTVALWKFSSHCLSQIFLLMIFILHSSTETRSLLCFSADAGPIRSLAWAPEESDPESSNLVVTTGPEGLKFWDVRDPHRPLWEPYPMQRAILSLEWMKDPRCVIISLDDGTLRTFSLWDLANDGPVIGKPSDGMKQPAWHSYFCSSFALWSIQVSRSTGLAAYCGAEGSTYYFKLTVNSLKDPRNHLPHILCGSLSKDGEKVKISTPLLNTPSLVTKHMSTCTVTSQVLIPYTAGANHATGPKDLKSSLPGNRIFFFPKMKKPKSKPKNVESEHGCREAESEFLDSPSKVLAMHRVRWNTNKGSERWLCYGGAAGIVRCQEIS
SIO_010081: LOC120251853
subclass of: SO_0000673
so part of: LOC120251853
location: join(1462452..1462455,1474514..1474721,1474817..1474949,1475064..1475101,1475312..1475402,1476275..1477825,1478954..1479085,1480629..1480701,1480830..1480868,1481053..1481165,1481700..1481765,1482104..1482181,1483036..1483208,1483502..1483548,1483650..1483878,1483983..1484203)
location: region:1462452-1484203:1
so has part: feature:1462452-1462455:1:exon
so has part: feature:1474514-1474721:1:exon
so has part: feature:1474817-1474949:1:exon
so has part: feature:1475064-1475101:1:exon
so has part: feature:1475312-1475402:1:exon
so has part: feature:1476275-1477825:1:exon
so has part: feature:1478954-1479085:1:exon
so has part: feature:1480629-1480701:1:exon
so has part: feature:1480830-1480868:1:exon
so has part: feature:1481053-1481165:1:exon
so has part: feature:1481700-1481765:1:exon
so has part: feature:1482104-1482181:1:exon
so has part: feature:1483036-1483208:1:exon
so has part: feature:1483502-1483548:1:exon
so has part: feature:1483650-1483878:1:exon
so has part: feature:1483983-1484203:1:exon

XP_039116441.1
type: Protein
SIO_000068: ncbiprotein

position:1462452:1
position: 1462452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1484203:1
position: 1484203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1462452-1462455:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1474514-1474721:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1474817-1474949:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1475064-1475101:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1475312-1475402:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1476275-1477825:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1478954-1479085:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1480629-1480701:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1480830-1480868:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1481053-1481165:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1481700-1481765:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1482104-1482181:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1483036-1483208:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1483502-1483548:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1483650-1483878:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1483983-1484203:1:exon

LOC120252291
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252291
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(1505474..1505580)
location: region:1505474-1505580:-1
so has part: feature:1505474-1505580:-1:exon
subclass of: SO_0000578

120252291
type: Gene
SIO_000068: ncbigene

position:1505474:-1
position: 1505474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1505580:-1
position: 1505580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1505474-1505580:-1:exon

LOC120252291
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252291
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533834.1
SIO_010081: LOC120252291
subclass of: SO_0000673
so part of: LOC120252291
location: complement(1505474..1505580)
location: region:1505474-1505580:-1
so has part: feature:1505474-1505580:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1505474-1505580:-1:exon

LOC120252370
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252370
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 1538928..1539034
location: region:1538928-1539034:1
so has part: feature:1538928-1539034:1:exon
subclass of: SO_0000578

120252370
type: Gene
SIO_000068: ncbigene

position:1538928:1
position: 1538928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1539034:1
position: 1539034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1538928-1539034:1:exon

LOC120252370
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252370
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533905.1
SIO_010081: LOC120252370
subclass of: SO_0000673
so part of: LOC120252370
location: 1538928..1539034
location: region:1538928-1539034:1
so has part: feature:1538928-1539034:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1538928-1539034:1:exon

LOC120252305
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252305
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(1541978..1542084)
location: region:1541978-1542084:-1
so has part: feature:1541978-1542084:-1:exon
subclass of: SO_0000578

120252305
type: Gene
SIO_000068: ncbigene

position:1541978:-1
position: 1541978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1542084:-1
position: 1542084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1541978-1542084:-1:exon

LOC120252305
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252305
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533846.1
SIO_010081: LOC120252305
subclass of: SO_0000673
so part of: LOC120252305
location: complement(1541978..1542084)
location: region:1541978-1542084:-1
so has part: feature:1541978-1542084:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1541978-1542084:-1:exon

LOC120251766
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120251766
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1550966..1553432
location: region:1550966-1553432:1
so has part: feature:1550966-1553432:1:exon
subclass of: SO_0000011

120251766
type: Gene
SIO_000068: ncbigene

position:1550966:1
position: 1550966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1553432:1
position: 1553432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1550966-1553432:1:exon

LOC120251766
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: lncRNA
gene: LOC120251766
product: uncharacterized LOC120251766
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XR_005533479.1
SIO_010081: LOC120251766
subclass of: SO_0000673
so part of: LOC120251766
location: join(1550966..1551031,1552764..1552817,1552946..1553432)
location: region:1550966-1553432:1
so has part: feature:1550966-1551031:1:exon
so has part: feature:1552764-1552817:1:exon
so has part: feature:1552946-1553432:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1550966-1551031:1:exon

position:1551031:1
position: 1551031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1552764-1552817:1:exon

position:1552764:1
position: 1552764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1552817:1
position: 1552817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1552946-1553432:1:exon

position:1552946:1
position: 1552946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120251854
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120251854
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1573670..1575280)
location: region:1573670-1575280:-1
so has part: feature:1573670-1575280:-1:exon
subclass of: SO_0000010

120251854
type: Gene
SIO_000068: ncbigene

position:1573670:-1
position: 1573670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1575280:-1
position: 1575280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1573670-1575280:-1:exon

LOC120251854
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 55577
gene: LOC120251854
product: uncharacterized LOC120251854
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_039260508.1
SIO_010081: LOC120251854
subclass of: SO_0000673
so part of: LOC120251854
location: complement(join(1573670..1574401,1574546..1575280))
location: region:1573670-1575280:-1
so has part: feature:1574546-1575280:-1:exon
so has part: feature:1573670-1574401:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1574546-1575280:-1:exon

position:1574546:-1
position: 1574546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1573670-1574401:-1:exon

position:1574401:-1
position: 1574401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120251854
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 55577
gene: LOC120251854
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC120251854
translation: MTPIAATRMSLNLVITSTKGSWILTVVYNSQIVSSQRLLWFTLADINRICLPWLIFGDFNAILSTDDFKGGASNSYIFKSRFFSNFVNSNNLMDIGFVGPRFTWCNNQSGFARRWARLDRCLANLDWISKFSSLKNTHLPGACSDHCPLLLTANSFIAPSYSIFRFNNFWFEYNTCHDIIINSFEADNHSSPMQSIQHCLFRAKRDLLSWRRTGHCSIDIEISNIEAEISLMEARELQSMDPWLVVKSRINSLRDFSGNILTSRGDIENSFLDHYQNLWSSLSTLSLDQTFSILPDDFPTLASDDKEDLIKPVTKGEVFRTLRSMPRGKSPGPDGFNVEFYLFYWNVLGDHIFKAITHFFTTAIIPSSWGKTFVVLIPKVDHPQKVTDFRPISLCNVCYKLISKILAERLKVILPKLIGIEQSGFLEGRSTFDNIIAVHELAHSLEFDKSSPPRMLVKVDIDKAFDTVEWSTILATLRRMGFPDKWIS
SIO_010081: LOC120251854
subclass of: SO_0000673
so part of: LOC120251854
location: complement(join(1573670..1574401,1574546..1575280))
location: region:1573670-1575280:-1
so has part: feature:1574546-1575280:-1:exon
so has part: feature:1573670-1574401:-1:exon

XP_039116442.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1574546-1575280:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1573670-1574401:-1:exon

LOC120251237
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120251237
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1577296..1579633)
location: region:1577296-1579633:-1
so has part: feature:1577296-1579633:-1:exon
subclass of: SO_0000010

120251237
type: Gene
SIO_000068: ncbigene

position:1577296:-1
position: 1577296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1579633:-1
position: 1579633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1577296-1579633:-1:exon

LOC120251237
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 55577
gene: LOC120251237
product: zinc finger CCCH domain-containing protein 9-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_039259783.1
SIO_010081: LOC120251237
subclass of: SO_0000673
so part of: LOC120251237
location: complement(join(1577296..1577888,1578283..1578911,1579580..1579633))
location: region:1577296-1579633:-1
so has part: feature:1579580-1579633:-1:exon
so has part: feature:1578283-1578911:-1:exon
so has part: feature:1577296-1577888:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1579580-1579633:-1:exon

position:1579580:-1
position: 1579580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1578283-1578911:-1:exon

position:1578283:-1
position: 1578283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1578911:-1
position: 1578911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1577296-1577888:-1:exon

position:1577888:-1
position: 1577888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120251237
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 55577
gene: LOC120251237
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger CCCH domain-containing protein 9-like
translation: MQQEMMITGSIKSEPFTSPDRRFQQYLSSGSIDLFGLYSPKNPTVTSPASLTPSSISFDDESEDHHDAAAITDTQLYLARLTLQYRQLADRYDLCLSHLQDAADELESLRQENAELRIAKNDLAKRLSEIRNGRAIVDEFRRLRLAEEGTSPTSVLGGSFSHAEKRVTLPKSISIRSSGFLKLNPTGRPSGPSSSARFSQQHQHQHQHQHQHHHQQHQQHQQHQHQHQKVYLGTGDEEKKSDVEVEVYNQGMFKTELCNKWEELGECPYGEHCQFAHGISELRPVIRHPRYKTEVCRMVLSGDTCPYGHRCHFRHAISPSDRLN
SIO_010081: LOC120251237
subclass of: SO_0000673
so part of: LOC120251237
location: complement(join(1577511..1577888,1578283..1578879))
location: region:1577511-1578879:-1
so has part: feature:1578283-1578879:-1:exon
so has part: feature:1577511-1577888:-1:exon

XP_039115717.1
type: Protein
SIO_000068: ncbiprotein

position:1577511:-1
position: 1577511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1578879:-1
position: 1578879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1578283-1578879:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1577511-1577888:-1:exon

LOC120251049
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120251049
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1605366..1609075)
location: region:1605366-1609075:-1
so has part: feature:1605366-1609075:-1:exon
subclass of: SO_0000010

120251049
type: Gene
SIO_000068: ncbigene

position:1605366:-1
position: 1605366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1609075:-1
position: 1609075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1605366-1609075:-1:exon

LOC120251049
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 55577
gene: LOC120251049
product: amino-acid permease BAT1 homolog
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_039259584.1
SIO_010081: LOC120251049
subclass of: SO_0000673
so part of: LOC120251049
location: complement(join(1605366..1605899,1606142..1606258,1606424..1606713,1606907..1607088,1607178..1607397,1607531..1607549,1608533..1608793,1608868..1609075))
location: region:1605366-1609075:-1
so has part: feature:1608868-1609075:-1:exon
so has part: feature:1608533-1608793:-1:exon
so has part: feature:1607531-1607549:-1:exon
so has part: feature:1607178-1607397:-1:exon
so has part: feature:1606907-1607088:-1:exon
so has part: feature:1606424-1606713:-1:exon
so has part: feature:1606142-1606258:-1:exon
so has part: feature:1605366-1605899:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1608868-1609075:-1:exon

position:1608868:-1
position: 1608868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1608533-1608793:-1:exon

position:1608533:-1
position: 1608533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1608793:-1
position: 1608793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1607531-1607549:-1:exon

position:1607531:-1
position: 1607531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1607549:-1
position: 1607549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1607178-1607397:-1:exon

position:1607178:-1
position: 1607178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1607397:-1
position: 1607397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1606907-1607088:-1:exon

position:1606907:-1
position: 1606907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1607088:-1
position: 1607088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1606424-1606713:-1:exon

position:1606424:-1
position: 1606424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1606713:-1
position: 1606713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1606142-1606258:-1:exon

position:1606142:-1
position: 1606142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1606258:-1
position: 1606258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1605366-1605899:-1:exon

position:1605899:-1
position: 1605899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120251049
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 55577
gene: LOC120251049
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: amino-acid permease BAT1 homolog
translation: MVSGVNGNDGAGMDSGHARLHELGYKQELKRDLSVLSNFAFSFSIISVLTGITTLYNTGLKYGGPIVMTYGWFVAAFFTMSVGLSMAEICSSFPTSGGLYYWSARLSGKKWAPFASWMTGWFNIVGQWAVTTSVDFSLAQLIQVIILLSTGGNNGGGYLASKYVVIAFHGGILLVHAILNSLPISWLSFFGQLAAAWNLLGVFVLMILIPTVATKKASEEFVFTHFNTDNDAGIHSKVYIFVLGLLMSQYTLTGYDASAHMTEETKNADMNGPKGIISAIGISIIVGWGYLLGITFAVTNIPELLNLDNDAGGYAIAEVFYQVFKSRYGNGVGGIICLGIIAVAIFFCGMSSVTSNSRMAYAFSRDGAMPLSAQWHKVNKNEVPINAVWLSVFISFLLVISHLESLVAFQAMVSIATIGLYIAYALPIFFGDSCSKXTFIPGPFNLGRYGVLVGWIAVLWVATITVMFSLPVQYPVTKDTLNYTPVAVGGLLILTVSSWIISARHWFKGPITNLGT
SIO_010081: LOC120251049
subclass of: SO_0000673
so part of: LOC120251049
location: complement(join(1605540..1605899,1606142..1606258,1606424..1606713,1606907..1607088,1607178..1607397,1607531..1607549,1608533..1608793,1608868..1608968))
location: region:1605540-1608968:-1
so has part: feature:1608868-1608968:-1:exon
so has part: feature:1608533-1608793:-1:exon
so has part: feature:1607531-1607549:-1:exon
so has part: feature:1607178-1607397:-1:exon
so has part: feature:1606907-1607088:-1:exon
so has part: feature:1606424-1606713:-1:exon
so has part: feature:1606142-1606258:-1:exon
so has part: feature:1605540-1605899:-1:exon

XP_039115518.1
type: Protein
SIO_000068: ncbiprotein

position:1605540:-1
position: 1605540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1608968:-1
position: 1608968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1608868-1608968:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1608533-1608793:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1607531-1607549:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1607178-1607397:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1606907-1607088:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1606424-1606713:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1606142-1606258:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1605540-1605899:-1:exon

LOC120251856
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120251856
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1651385..1652066)
location: region:1651385-1652066:-1
so has part: feature:1651385-1652066:-1:exon
subclass of: SO_0000010

120251856
type: Gene
SIO_000068: ncbigene

position:1651385:-1
position: 1651385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1652066:-1
position: 1652066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1651385-1652066:-1:exon

LOC120251856
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 55577
gene: LOC120251856
product: uncharacterized LOC120251856
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_039260511.1
SIO_010081: LOC120251856
subclass of: SO_0000673
so part of: LOC120251856
location: complement(join(1651385..1651706,1651792..1652066))
location: region:1651385-1652066:-1
so has part: feature:1651792-1652066:-1:exon
so has part: feature:1651385-1651706:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1651792-1652066:-1:exon

position:1651792:-1
position: 1651792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1651385-1651706:-1:exon

position:1651706:-1
position: 1651706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120251856
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 55577
gene: LOC120251856
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC120251856
translation: MWVIGDHLTKIAHFLPLKPGLGLEKLEELFLGEIIRLHGIPVSITSDRDSTFISWFWRSLQSPLGIILTFSTAFYPQTNGQSERTIQILEDMQLFIWHHTRLFTGGSVDLLCVRVMLENGSCWVQTVFFRISLMKGVVRFGKRGKLNPRCIGPFEIVERVGSVVYCLPLPPDIAQVHNVIHVSMLEGSICRSIACHST
SIO_010081: LOC120251856
subclass of: SO_0000673
so part of: LOC120251856
location: complement(join(1651385..1651706,1651792..1652066))
location: region:1651385-1652066:-1
so has part: feature:1651792-1652066:-1:exon
so has part: feature:1651385-1651706:-1:exon

XP_039116445.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1651792-1652066:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1651385-1651706:-1:exon

LOC120252425
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252425
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 1697465..1697571
location: region:1697465-1697571:1
so has part: feature:1697465-1697571:1:exon
subclass of: SO_0000578

120252425
type: Gene
SIO_000068: ncbigene

position:1697465:1
position: 1697465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1697571:1
position: 1697571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1697465-1697571:1:exon

LOC120252425
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252425
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533955.1
SIO_010081: LOC120252425
subclass of: SO_0000673
so part of: LOC120252425
location: 1697465..1697571
location: region:1697465-1697571:1
so has part: feature:1697465-1697571:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1697465-1697571:1:exon

LOC120252131
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252131
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 1701731..1701837
location: region:1701731-1701837:1
so has part: feature:1701731-1701837:1:exon
subclass of: SO_0000578

120252131
type: Gene
SIO_000068: ncbigene

position:1701731:1
position: 1701731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1701837:1
position: 1701837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1701731-1701837:1:exon

LOC120252131
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252131
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533678.1
SIO_010081: LOC120252131
subclass of: SO_0000673
so part of: LOC120252131
location: 1701731..1701837
location: region:1701731-1701837:1
so has part: feature:1701731-1701837:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1701731-1701837:1:exon

LOC120252138
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252138
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 1811681..1811787
location: region:1811681-1811787:1
so has part: feature:1811681-1811787:1:exon
subclass of: SO_0000578

120252138
type: Gene
SIO_000068: ncbigene

position:1811681:1
position: 1811681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1811787:1
position: 1811787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1811681-1811787:1:exon

LOC120252138
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252138
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533684.1
SIO_010081: LOC120252138
subclass of: SO_0000673
so part of: LOC120252138
location: 1811681..1811787
location: region:1811681-1811787:1
so has part: feature:1811681-1811787:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1811681-1811787:1:exon

LOC120252190
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252190
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 1822467..1822573
location: region:1822467-1822573:1
so has part: feature:1822467-1822573:1:exon
subclass of: SO_0000578

120252190
type: Gene
SIO_000068: ncbigene

position:1822467:1
position: 1822467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1822573:1
position: 1822573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1822467-1822573:1:exon

LOC120252190
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252190
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533732.1
SIO_010081: LOC120252190
subclass of: SO_0000673
so part of: LOC120252190
location: 1822467..1822573
location: region:1822467-1822573:1
so has part: feature:1822467-1822573:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1822467-1822573:1:exon

LOC120251857
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120251857
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1875680..1878199
location: region:1875680-1878199:1
so has part: feature:1875680-1878199:1:exon
subclass of: SO_0000010

120251857
type: Gene
SIO_000068: ncbigene

position:1875680:1
position: 1875680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1878199:1
position: 1878199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1875680-1878199:1:exon

LOC120251857
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 55577
gene: LOC120251857
product: uncharacterized LOC120251857
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_039260512.1
SIO_010081: LOC120251857
subclass of: SO_0000673
so part of: LOC120251857
location: join(1875680..1876911,1876993..1877301,1877374..1877479,1877561..1877731,1877861..1878199)
location: region:1875680-1878199:1
so has part: feature:1875680-1876911:1:exon
so has part: feature:1876993-1877301:1:exon
so has part: feature:1877374-1877479:1:exon
so has part: feature:1877561-1877731:1:exon
so has part: feature:1877861-1878199:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1875680-1876911:1:exon

position:1876911:1
position: 1876911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1876993-1877301:1:exon

position:1876993:1
position: 1876993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1877301:1
position: 1877301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1877374-1877479:1:exon

position:1877374:1
position: 1877374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1877479:1
position: 1877479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1877561-1877731:1:exon

position:1877561:1
position: 1877561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1877731:1
position: 1877731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1877861-1878199:1:exon

position:1877861:1
position: 1877861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120251857
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 55577
gene: LOC120251857
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC120251857
translation: MIIPGVNGPGNDIDIYLQPLIKELKQLWVGLQTYDASRKQNFNLRAALMWRINDFPAYAILSGWRTKGKYACPCCAAKTASRWLSNGQKFCYMGHRRWLAKDHPYRLQKHLFDGTLELREAPLSTSGSNILLMLNDVQYSYGKRIKQRLRKSKASSSSKKRQRQESNFQEDSVMDKEEDESQEADLWKKRSIFFDLPYWEHLLMRHNLDVMHIEKNVCENIIGTLLNVDGKSKDNLKARLDLVDMGIRHVLHPEYLPNGRTRLPPAIYSMTKGEKDVFCQVSKNIKVPDGYSSNISRCVNQKERKLHSLKSHDHHILLHDLLPIALRLSSSKQVMCSISELCNIFKILCGKVLNVEELDKLQYRASMVLCQLEKIFPPSFFTIMVHLLIHLPLQAKLGGPVHYQWMYPIERFLLKLKNYVRNKRYPEGSIVEGYLAEECVTFCSRYLEDVETIFDKPSRNLGEVHDEALGGTYLFHSHGQPIRQFEITELDAKSLAQAHRYVLLHHDVTVTLQSEYKNILRQQMRARRSTARDVDMQFTKTFHEWLAEVVSRGRNVTEEVRFLAQGPNRIVKRYKGYIINGFRFHTKSRERLRRTQNSGCVVTSSTADVTNSRGIKKDKYGFTMVNFSRLIHTGANVIDEPYVFSSQVKQVFYSKDLTESGWYVVIRNHAREVYDMGDESTESGPRTDCFPTSSEGILSSNDDEQWVHEDANEDVYAA
SIO_010081: LOC120251857
subclass of: SO_0000673
so part of: LOC120251857
location: join(1875680..1876911,1876993..1877301,1877374..1877479,1877561..1877731,1877861..1878199)
location: region:1875680-1878199:1
so has part: feature:1875680-1876911:1:exon
so has part: feature:1876993-1877301:1:exon
so has part: feature:1877374-1877479:1:exon
so has part: feature:1877561-1877731:1:exon
so has part: feature:1877861-1878199:1:exon

XP_039116446.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1875680-1876911:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1876993-1877301:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1877374-1877479:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1877561-1877731:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1877861-1878199:1:exon

LOC120251858
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120251858
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1883292..1885475
location: region:1883292-1885475:1
so has part: feature:1883292-1885475:1:exon
subclass of: SO_0000010

120251858
type: Gene
SIO_000068: ncbigene

position:1883292:1
position: 1883292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1885475:1
position: 1885475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1883292-1885475:1:exon

LOC120251858
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 55577
gene: LOC120251858
product: uncharacterized LOC120251858
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_039260513.1
SIO_010081: LOC120251858
subclass of: SO_0000673
so part of: LOC120251858
location: join(1883292..1883295,1883401..1883646,1883737..1883981,1884090..1884290,1884373..1884465,1884567..1884668,1884979..1885122,1885318..1885380,1885452..1885475)
location: region:1883292-1885475:1
so has part: feature:1883292-1883295:1:exon
so has part: feature:1883401-1883646:1:exon
so has part: feature:1883737-1883981:1:exon
so has part: feature:1884090-1884290:1:exon
so has part: feature:1884373-1884465:1:exon
so has part: feature:1884567-1884668:1:exon
so has part: feature:1884979-1885122:1:exon
so has part: feature:1885318-1885380:1:exon
so has part: feature:1885452-1885475:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1883292-1883295:1:exon

position:1883295:1
position: 1883295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1883401-1883646:1:exon

position:1883401:1
position: 1883401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1883646:1
position: 1883646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1883737-1883981:1:exon

position:1883737:1
position: 1883737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1883981:1
position: 1883981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1884090-1884290:1:exon

position:1884090:1
position: 1884090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1884290:1
position: 1884290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1884373-1884465:1:exon

position:1884373:1
position: 1884373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1884465:1
position: 1884465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1884567-1884668:1:exon

position:1884567:1
position: 1884567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1884668:1
position: 1884668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1884979-1885122:1:exon

position:1884979:1
position: 1884979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1885122:1
position: 1885122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1885318-1885380:1:exon

position:1885318:1
position: 1885318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1885380:1
position: 1885380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1885452-1885475:1:exon

position:1885452:1
position: 1885452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120251858
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 55577
gene: LOC120251858
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC120251858
translation: MDNIKMPRSKLKDMKVIRSETNTSHNAAITNEVEISTGQMPDAQRRTSTHSSSDTNSNRNGDDENEDHDKIIENTSGVVNVKTVDNAGRCKGRGRTTLKELWALPPGEKVLVSANGLGQPIGPEAQLFSSFLGMIARSSQKIGLQYESWHKVPKTLKDELLNFIETRFVLEIPKDYVLKSLGKKWRDNKHDLKRKYFKREDGLQANKEKHPEGTVSWQWEELVDFWYSRKGEESEQVGVFSRKQQKYTHTSGSKSFARKEKEMELRSGKKIGRFEFFKATHNKKDGSYLNKETEEIMMNEKFQKMEDELGQERANYNTLYTFLQQQFPGATIPLPTIGGSSSQSHNQCIGFQTPKANTAGSSVHVQNQASPEH
SIO_010081: LOC120251858
subclass of: SO_0000673
so part of: LOC120251858
location: join(1883292..1883295,1883401..1883646,1883737..1883981,1884090..1884290,1884373..1884465,1884567..1884668,1884979..1885122,1885318..1885380,1885452..1885475)
location: region:1883292-1885475:1
so has part: feature:1883292-1883295:1:exon
so has part: feature:1883401-1883646:1:exon
so has part: feature:1883737-1883981:1:exon
so has part: feature:1884090-1884290:1:exon
so has part: feature:1884373-1884465:1:exon
so has part: feature:1884567-1884668:1:exon
so has part: feature:1884979-1885122:1:exon
so has part: feature:1885318-1885380:1:exon
so has part: feature:1885452-1885475:1:exon

XP_039116447.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1883292-1883295:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1883401-1883646:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1883737-1883981:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1884090-1884290:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1884373-1884465:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1884567-1884668:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1884979-1885122:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1885318-1885380:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1885452-1885475:1:exon

LOC120252014
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252014
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 1892966..1893072
location: region:1892966-1893072:1
so has part: feature:1892966-1893072:1:exon
subclass of: SO_0000578

120252014
type: Gene
SIO_000068: ncbigene

position:1892966:1
position: 1892966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1893072:1
position: 1893072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1892966-1893072:1:exon

LOC120252014
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252014
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533568.1
SIO_010081: LOC120252014
subclass of: SO_0000673
so part of: LOC120252014
location: 1892966..1893072
location: region:1892966-1893072:1
so has part: feature:1892966-1893072:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1892966-1893072:1:exon

LOC120252103
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252103
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(1943385..1943491)
location: region:1943385-1943491:-1
so has part: feature:1943385-1943491:-1:exon
subclass of: SO_0000578

120252103
type: Gene
SIO_000068: ncbigene

position:1943385:-1
position: 1943385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1943491:-1
position: 1943491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1943385-1943491:-1:exon

LOC120252103
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252103
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533651.1
SIO_010081: LOC120252103
subclass of: SO_0000673
so part of: LOC120252103
location: complement(1943385..1943491)
location: region:1943385-1943491:-1
so has part: feature:1943385-1943491:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1943385-1943491:-1:exon

LOC120251859
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120251859
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 1959220..1960660
location: region:1959220-1960660:1
so has part: feature:1959220-1960660:1:exon

120251859
type: Gene
SIO_000068: ncbigene

position:1959220:1
position: 1959220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1960660:1
position: 1960660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1959220-1960660:1:exon

LOC120251859
type: Exon
subclass of: SO_0000147
RO_0002162: 55577
gene: LOC120251859
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins
pseudo: true
SIO_010081: LOC120251859
subclass of: SO_0000673
so part of: LOC120251859
location: 1959220..1959772
location: region:1959220-1959772:1
so has part: feature:1959220-1959772:1:exon

position:1959772:1
position: 1959772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1959220-1959772:1:exon

LOC120251859
type: Exon
subclass of: SO_0000147
RO_0002162: 55577
gene: LOC120251859
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins
pseudo: true
SIO_010081: LOC120251859
subclass of: SO_0000673
so part of: LOC120251859
location: 1960335..1960436
location: region:1960335-1960436:1
so has part: feature:1960335-1960436:1:exon

position:1960335:1
position: 1960335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1960436:1
position: 1960436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1960335-1960436:1:exon

LOC120251859
type: Exon
subclass of: SO_0000147
RO_0002162: 55577
gene: LOC120251859
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins
pseudo: true
SIO_010081: LOC120251859
subclass of: SO_0000673
so part of: LOC120251859
location: 1960523..1960660
location: region:1960523-1960660:1
so has part: feature:1960523-1960660:1:exon

position:1960523:1
position: 1960523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1960523-1960660:1:exon

LOC120251240
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120251240
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1962828..1964012)
location: region:1962828-1964012:-1
so has part: feature:1962828-1964012:-1:exon
subclass of: SO_0000010

120251240
type: Gene
SIO_000068: ncbigene

position:1962828:-1
position: 1962828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1964012:-1
position: 1964012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1962828-1964012:-1:exon

LOC120251240
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 55577
gene: LOC120251240
product: piriformospora indica-insensitive protein 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_039259787.1
SIO_010081: LOC120251240
subclass of: SO_0000673
so part of: LOC120251240
location: complement(join(1962828..1963421,1963509..1964012))
location: region:1962828-1964012:-1
so has part: feature:1963509-1964012:-1:exon
so has part: feature:1962828-1963421:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1963509-1964012:-1:exon

position:1963509:-1
position: 1963509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1962828-1963421:-1:exon

position:1963421:-1
position: 1963421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120251240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 55577
gene: LOC120251240
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: piriformospora indica-insensitive protein 2-like
translation: MRLVLLLLPIVFFNGLCKSDVMTAPMHKGELQALYLVIQGFTGNSWNVSQLYPDPCGWTPIQGVSCDIFHKLWSVTSINIGPVFENSLACTPQANFNQYIFGLKHLRSLSFFNCFSSQHPTKIPSNAWKHLSESLENLEFRSNEGLVGKIPKSFGHLTNLKSLVLVENSLTGEVPQELANLVNLKKLSLSSNALSGRIPASLGYNNSMNQLLILDFSRNSITGPIPSSLGSMISLLKLDLSNNNLNGMLP
SIO_010081: LOC120251240
subclass of: SO_0000673
so part of: LOC120251240
location: complement(join(1962855..1963421,1963509..1963694))
location: region:1962855-1963694:-1
so has part: feature:1963509-1963694:-1:exon
so has part: feature:1962855-1963421:-1:exon

XP_039115721.1
type: Protein
SIO_000068: ncbiprotein

position:1962855:-1
position: 1962855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1963694:-1
position: 1963694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1963509-1963694:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1962855-1963421:-1:exon

LOC120251861
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120251861
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1981899..1983493
location: region:1981899-1983493:1
so has part: feature:1981899-1983493:1:exon
subclass of: SO_0000010

120251861
type: Gene
SIO_000068: ncbigene

position:1981899:1
position: 1981899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1983493:1
position: 1983493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1981899-1983493:1:exon

LOC120251861
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 55577
gene: LOC120251861
product: uncharacterized LOC120251861
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 64% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_039260514.1
SIO_010081: LOC120251861
subclass of: SO_0000673
so part of: LOC120251861
location: join(1981899..1982033,1982514..1982550,1982604..1982711,1982796..1982865,1983028..1983367,1983467..1983493)
location: region:1981899-1983493:1
so has part: feature:1981899-1982033:1:exon
so has part: feature:1982514-1982550:1:exon
so has part: feature:1982604-1982711:1:exon
so has part: feature:1982796-1982865:1:exon
so has part: feature:1983028-1983367:1:exon
so has part: feature:1983467-1983493:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1981899-1982033:1:exon

position:1982033:1
position: 1982033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1982514-1982550:1:exon

position:1982514:1
position: 1982514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1982550:1
position: 1982550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1982604-1982711:1:exon

position:1982604:1
position: 1982604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1982711:1
position: 1982711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1982796-1982865:1:exon

position:1982796:1
position: 1982796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1982865:1
position: 1982865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1983028-1983367:1:exon

position:1983028:1
position: 1983028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1983367:1
position: 1983367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1983467-1983493:1:exon

position:1983467:1
position: 1983467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120251861
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 55577
gene: LOC120251861
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC120251861
translation: MVKGEGNEGELSYYGIILDIIELRYTGGNKKLHYLDVTGMILLGKDYIENDKKRKTTNDENVEINLDYSLPSSTRASNEICSSSAPPNKRHRKVNVRGKAKGVKSGEGIEVEIYDNRIITPKAISEIHVLFHQKINGPWTSYSEYPKSELDTLFARYLAVGFSHNQLEEEVKKAFENSVKCRYSDWMLRIRKPIFEKHETREDRYKHPPSFIPSNVWKEMVDKWMGDNWQHKSDKNKN
SIO_010081: LOC120251861
subclass of: SO_0000673
so part of: LOC120251861
location: join(1981899..1982033,1982514..1982550,1982604..1982711,1982796..1982865,1983028..1983367,1983467..1983493)
location: region:1981899-1983493:1
so has part: feature:1981899-1982033:1:exon
so has part: feature:1982514-1982550:1:exon
so has part: feature:1982604-1982711:1:exon
so has part: feature:1982796-1982865:1:exon
so has part: feature:1983028-1983367:1:exon
so has part: feature:1983467-1983493:1:exon

XP_039116448.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1981899-1982033:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1982514-1982550:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1982604-1982711:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1982796-1982865:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1983028-1983367:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1983467-1983493:1:exon

LOC120251957
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120251957
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1983550..1983899
location: region:1983550-1983899:1
so has part: feature:1983550-1983899:1:exon
subclass of: SO_0000011

120251957
type: Gene
SIO_000068: ncbigene

position:1983550:1
position: 1983550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1983899:1
position: 1983899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1983550-1983899:1:exon

LOC120251957
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: lncRNA
gene: LOC120251957
product: uncharacterized LOC120251957
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_005533528.1
SIO_010081: LOC120251957
subclass of: SO_0000673
so part of: LOC120251957
location: join(1983550..1983560,1983652..1983756,1983830..1983899)
location: region:1983550-1983899:1
so has part: feature:1983550-1983560:1:exon
so has part: feature:1983652-1983756:1:exon
so has part: feature:1983830-1983899:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1983550-1983560:1:exon

position:1983560:1
position: 1983560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1983652-1983756:1:exon

position:1983652:1
position: 1983652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1983756:1
position: 1983756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1983830-1983899:1:exon

position:1983830:1
position: 1983830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120251862
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120251862
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2032298..2034592)
location: region:2032298-2034592:-1
so has part: feature:2032298-2034592:-1:exon
subclass of: SO_0000010

120251862
type: Gene
SIO_000068: ncbigene

position:2032298:-1
position: 2032298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2034592:-1
position: 2034592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2032298-2034592:-1:exon

LOC120251862
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 55577
gene: LOC120251862
product: cytochrome P450 71A9-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_039260515.1
SIO_010081: LOC120251862
subclass of: SO_0000673
so part of: LOC120251862
location: complement(join(2032298..2032906,2033693..2034592))
location: region:2032298-2034592:-1
so has part: feature:2033693-2034592:-1:exon
so has part: feature:2032298-2032906:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2033693-2034592:-1:exon

position:2033693:-1
position: 2033693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2032298-2032906:-1:exon

position:2032906:-1
position: 2032906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120251862
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 55577
gene: LOC120251862
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytochrome P450 71A9-like
translation: MSPEFLTQPFLLLLPFLVLLLSIKLVFFSNTRLVKLPPCPWKLPFIGNLHQLGLLPHQSLHKLSKKHGPLMLLKLGQVPTLVVSSSQIAKEILKTHDLNFANRPILRAAEILLYGSSSMGFSPYGEHWRNMKKVCMINFLSMKKVQSFHATRKEEVAHLMDKIASHASSNPLEPLNMSQVLYFFTSDMLCKAILGKFSREEDRNKLFHEMIKENVRLLNGFNLVDYFPSLGWLNSLLDLDKRTKRNFSKWDAVLNQIFQERGMIDEEVKDDGFMDILLSLQKNPYVDFSFTDDQIKALLVDMFVAGTETTYIVLGWSLAELIKNPEIMKKLRNEIRNLTHGKSMVQEEDISEMNYLKAFIKEILRLHPPTPMLLPRESIEGCQIEGYEIPRKTRVIINYWAIARDPRIWDSPEEFKPDRFISNDIDFKGQNYEFIPFGAGRRICPGMHFAVSTMEVALANLIYRFDWKFFQIVDGEEIDMTEGTGLTMKMKQNLYLIPKSWM
SIO_010081: LOC120251862
subclass of: SO_0000673
so part of: LOC120251862
location: complement(join(2032298..2032906,2033693..2034592))
location: region:2032298-2034592:-1
so has part: feature:2033693-2034592:-1:exon
so has part: feature:2032298-2032906:-1:exon

XP_039116449.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2033693-2034592:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2032298-2032906:-1:exon

LOC120252347
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252347
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(2100381..2100487)
location: region:2100381-2100487:-1
so has part: feature:2100381-2100487:-1:exon
subclass of: SO_0000578

120252347
type: Gene
SIO_000068: ncbigene

position:2100381:-1
position: 2100381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2100487:-1
position: 2100487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2100381-2100487:-1:exon

LOC120252347
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252347
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533885.1
SIO_010081: LOC120252347
subclass of: SO_0000673
so part of: LOC120252347
location: complement(2100381..2100487)
location: region:2100381-2100487:-1
so has part: feature:2100381-2100487:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2100381-2100487:-1:exon

TRNAD-GUC
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: TRNAD-GUC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 2159489..2159560
location: region:2159489-2159560:1
so has part: feature:2159489-2159560:1:exon
subclass of: SO_0000663

120252463
type: Gene
SIO_000068: ncbigene

position:2159489:1
position: 2159489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2159560:1
position: 2159560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2159489-2159560:1:exon

TRNAD-GUC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 55577
gene: TRNAD-GUC
product: tRNA-Asp
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA aspartic acid (anticodon GUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:2159522..2159524,aa:Asp,seq:gtc)
SIO_010081: TRNAD-GUC
subclass of: SO_0000673
so part of: TRNAD-GUC
location: 2159489..2159560
location: region:2159489-2159560:1
so has part: feature:2159489-2159560:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2159489-2159560:1:exon

LOC120252124
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252124
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 2176861..2176967
location: region:2176861-2176967:1
so has part: feature:2176861-2176967:1:exon
subclass of: SO_0000578

120252124
type: Gene
SIO_000068: ncbigene

position:2176861:1
position: 2176861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2176967:1
position: 2176967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2176861-2176967:1:exon

LOC120252124
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252124
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533671.1
SIO_010081: LOC120252124
subclass of: SO_0000673
so part of: LOC120252124
location: 2176861..2176967
location: region:2176861-2176967:1
so has part: feature:2176861-2176967:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2176861-2176967:1:exon

LOC120252322
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252322
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(2200915..2201021)
location: region:2200915-2201021:-1
so has part: feature:2200915-2201021:-1:exon
subclass of: SO_0000578

120252322
type: Gene
SIO_000068: ncbigene

position:2200915:-1
position: 2200915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2201021:-1
position: 2201021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2200915-2201021:-1:exon

LOC120252322
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252322
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533863.1
SIO_010081: LOC120252322
subclass of: SO_0000673
so part of: LOC120252322
location: complement(2200915..2201021)
location: region:2200915-2201021:-1
so has part: feature:2200915-2201021:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2200915-2201021:-1:exon

LOC120252067
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252067
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 2245169..2245275
location: region:2245169-2245275:1
so has part: feature:2245169-2245275:1:exon
subclass of: SO_0000578

120252067
type: Gene
SIO_000068: ncbigene

position:2245169:1
position: 2245169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2245275:1
position: 2245275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2245169-2245275:1:exon

LOC120252067
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252067
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533618.1
SIO_010081: LOC120252067
subclass of: SO_0000673
so part of: LOC120252067
location: 2245169..2245275
location: region:2245169-2245275:1
so has part: feature:2245169-2245275:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2245169-2245275:1:exon

LOC120251864
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120251864
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2280877..2281449)
location: region:2280877-2281449:-1
so has part: feature:2280877-2281449:-1:exon
subclass of: SO_0000010

120251864
type: Gene
SIO_000068: ncbigene

position:2280877:-1
position: 2280877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2281449:-1
position: 2281449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2280877-2281449:-1:exon

LOC120251864
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 55577
gene: LOC120251864
product: uncharacterized LOC120251864
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_039260519.1
SIO_010081: LOC120251864
subclass of: SO_0000673
so part of: LOC120251864
location: complement(join(2280877..2281218,2281336..2281449))
location: region:2280877-2281449:-1
so has part: feature:2281336-2281449:-1:exon
so has part: feature:2280877-2281218:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2281336-2281449:-1:exon

position:2281336:-1
position: 2281336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2280877-2281218:-1:exon

position:2281218:-1
position: 2281218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120251864
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 55577
gene: LOC120251864
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC120251864
translation: MHKLFKSKDLWELIENGYEESDKENCKKRFKAIILHPATLRHDFETTQIKNNESVQNFIINVVGVINQMEIFGEPITNQVVVAKVLQSLISLFDYIVVTIEESKDLSKLTVEELSGSLQAHEAYLNRSSEEMEEKALHVKSEGASTREFDK
SIO_010081: LOC120251864
subclass of: SO_0000673
so part of: LOC120251864
location: complement(join(2280877..2281218,2281336..2281449))
location: region:2280877-2281449:-1
so has part: feature:2281336-2281449:-1:exon
so has part: feature:2280877-2281218:-1:exon

XP_039116453.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2281336-2281449:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2280877-2281218:-1:exon

LOC120252089
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252089
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 2290177..2290283
location: region:2290177-2290283:1
so has part: feature:2290177-2290283:1:exon
subclass of: SO_0000578

120252089
type: Gene
SIO_000068: ncbigene

position:2290177:1
position: 2290177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2290283:1
position: 2290283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2290177-2290283:1:exon

LOC120252089
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252089
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533638.1
SIO_010081: LOC120252089
subclass of: SO_0000673
so part of: LOC120252089
location: 2290177..2290283
location: region:2290177-2290283:1
so has part: feature:2290177-2290283:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2290177-2290283:1:exon

LOC120251913
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120251913
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2336614..2337090
location: region:2336614-2337090:1
so has part: feature:2336614-2337090:1:exon
subclass of: SO_0000011

120251913
type: Gene
SIO_000068: ncbigene

position:2336614:1
position: 2336614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2337090:1
position: 2337090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2336614-2337090:1:exon

LOC120251913
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: lncRNA
gene: LOC120251913
product: uncharacterized LOC120251913
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XR_005533521.1
SIO_010081: LOC120251913
subclass of: SO_0000673
so part of: LOC120251913
location: join(2336614..2336740,2336837..2336913,2337030..2337090)
location: region:2336614-2337090:1
so has part: feature:2336614-2336740:1:exon
so has part: feature:2336837-2336913:1:exon
so has part: feature:2337030-2337090:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2336614-2336740:1:exon

position:2336740:1
position: 2336740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2336837-2336913:1:exon

position:2336837:1
position: 2336837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2336913:1
position: 2336913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2337030-2337090:1:exon

position:2337030:1
position: 2337030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120251202
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120251202
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2337614..2339940
location: region:2337614-2339940:1
so has part: feature:2337614-2339940:1:exon
subclass of: SO_0000011

120251202
type: Gene
SIO_000068: ncbigene

position:2337614:1
position: 2337614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2339940:1
position: 2339940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2337614-2339940:1:exon

LOC120251202
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: lncRNA
gene: LOC120251202
product: uncharacterized LOC120251202
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XR_005533397.1
SIO_010081: LOC120251202
subclass of: SO_0000673
so part of: LOC120251202
location: join(2337614..2338514,2339798..2339940)
location: region:2337614-2339940:1
so has part: feature:2337614-2338514:1:exon
so has part: feature:2339798-2339940:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2337614-2338514:1:exon

position:2338514:1
position: 2338514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2339798-2339940:1:exon

position:2339798:1
position: 2339798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120252153
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252153
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 2383695..2383801
location: region:2383695-2383801:1
so has part: feature:2383695-2383801:1:exon
subclass of: SO_0000578

120252153
type: Gene
SIO_000068: ncbigene

position:2383695:1
position: 2383695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2383801:1
position: 2383801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2383695-2383801:1:exon

LOC120252153
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252153
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533698.1
SIO_010081: LOC120252153
subclass of: SO_0000673
so part of: LOC120252153
location: 2383695..2383801
location: region:2383695-2383801:1
so has part: feature:2383695-2383801:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2383695-2383801:1:exon

LOC120252135
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252135
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 2458276..2458382
location: region:2458276-2458382:1
so has part: feature:2458276-2458382:1:exon
subclass of: SO_0000578

120252135
type: Gene
SIO_000068: ncbigene

position:2458276:1
position: 2458276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2458382:1
position: 2458382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2458276-2458382:1:exon

LOC120252135
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252135
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533681.1
SIO_010081: LOC120252135
subclass of: SO_0000673
so part of: LOC120252135
location: 2458276..2458382
location: region:2458276-2458382:1
so has part: feature:2458276-2458382:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2458276-2458382:1:exon

LOC120252424
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252424
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 2665280..2665386
location: region:2665280-2665386:1
so has part: feature:2665280-2665386:1:exon
subclass of: SO_0000578

120252424
type: Gene
SIO_000068: ncbigene

position:2665280:1
position: 2665280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2665386:1
position: 2665386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2665280-2665386:1:exon

LOC120252424
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252424
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533954.1
SIO_010081: LOC120252424
subclass of: SO_0000673
so part of: LOC120252424
location: 2665280..2665386
location: region:2665280-2665386:1
so has part: feature:2665280-2665386:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2665280-2665386:1:exon

LOC120251055
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120251055
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(2701632..2702682)
location: region:2701632-2702682:-1
so has part: feature:2701632-2702682:-1:exon

120251055
type: Gene
SIO_000068: ncbigene

position:2701632:-1
position: 2701632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2702682:-1
position: 2702682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2701632-2702682:-1:exon

LOC120251055
type: Exon
subclass of: SO_0000147
RO_0002162: 55577
gene: LOC120251055
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins
pseudo: true
SIO_010081: LOC120251055
subclass of: SO_0000673
so part of: LOC120251055
location: complement(2701632..2701769)
location: region:2701632-2701769:-1
so has part: feature:2701632-2701769:-1:exon

position:2701769:-1
position: 2701769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2701632-2701769:-1:exon

LOC120251055
type: Exon
subclass of: SO_0000147
RO_0002162: 55577
gene: LOC120251055
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins
pseudo: true
SIO_010081: LOC120251055
subclass of: SO_0000673
so part of: LOC120251055
location: complement(2701848..2701964)
location: region:2701848-2701964:-1
so has part: feature:2701848-2701964:-1:exon

position:2701848:-1
position: 2701848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2701964:-1
position: 2701964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2701848-2701964:-1:exon

LOC120251055
type: Exon
subclass of: SO_0000147
RO_0002162: 55577
gene: LOC120251055
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins
pseudo: true
SIO_010081: LOC120251055
subclass of: SO_0000673
so part of: LOC120251055
location: complement(2702068..2702166)
location: region:2702068-2702166:-1
so has part: feature:2702068-2702166:-1:exon

position:2702068:-1
position: 2702068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2702166:-1
position: 2702166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2702068-2702166:-1:exon

LOC120251055
type: Exon
subclass of: SO_0000147
RO_0002162: 55577
gene: LOC120251055
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins
pseudo: true
SIO_010081: LOC120251055
subclass of: SO_0000673
so part of: LOC120251055
location: complement(2702291..2702512)
location: region:2702291-2702512:-1
so has part: feature:2702291-2702512:-1:exon

position:2702291:-1
position: 2702291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2702512:-1
position: 2702512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2702291-2702512:-1:exon

LOC120251055
type: Exon
subclass of: SO_0000147
RO_0002162: 55577
gene: LOC120251055
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins
pseudo: true
SIO_010081: LOC120251055
subclass of: SO_0000673
so part of: LOC120251055
location: complement(2702596..2702682)
location: region:2702596-2702682:-1
so has part: feature:2702596-2702682:-1:exon

position:2702596:-1
position: 2702596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2702596-2702682:-1:exon

LOC120251867
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120251867
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 2707033..2711343
location: region:2707033-2711343:1
so has part: feature:2707033-2711343:1:exon

120251867
type: Gene
SIO_000068: ncbigene

position:2707033:1
position: 2707033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2711343:1
position: 2711343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2707033-2711343:1:exon

LOC120251867
type: Exon
subclass of: SO_0000147
RO_0002162: 55577
gene: LOC120251867
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC120251867
subclass of: SO_0000673
so part of: LOC120251867
location: 2707033..2707132
location: region:2707033-2707132:1
so has part: feature:2707033-2707132:1:exon

position:2707132:1
position: 2707132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2707033-2707132:1:exon

LOC120251867
type: Exon
subclass of: SO_0000147
RO_0002162: 55577
gene: LOC120251867
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC120251867
subclass of: SO_0000673
so part of: LOC120251867
location: 2710518..2710752
location: region:2710518-2710752:1
so has part: feature:2710518-2710752:1:exon

position:2710518:1
position: 2710518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2710752:1
position: 2710752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2710518-2710752:1:exon

LOC120251867
type: Exon
subclass of: SO_0000147
RO_0002162: 55577
gene: LOC120251867
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC120251867
subclass of: SO_0000673
so part of: LOC120251867
location: 2710845..2710977
location: region:2710845-2710977:1
so has part: feature:2710845-2710977:1:exon

position:2710845:1
position: 2710845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2710977:1
position: 2710977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2710845-2710977:1:exon

LOC120251867
type: Exon
subclass of: SO_0000147
RO_0002162: 55577
gene: LOC120251867
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC120251867
subclass of: SO_0000673
so part of: LOC120251867
location: 2711063..2711149
location: region:2711063-2711149:1
so has part: feature:2711063-2711149:1:exon

position:2711063:1
position: 2711063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2711149:1
position: 2711149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2711063-2711149:1:exon

LOC120251867
type: Exon
subclass of: SO_0000147
RO_0002162: 55577
gene: LOC120251867
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC120251867
subclass of: SO_0000673
so part of: LOC120251867
location: 2711263..2711343
location: region:2711263-2711343:1
so has part: feature:2711263-2711343:1:exon

position:2711263:1
position: 2711263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2711263-2711343:1:exon

LOC120251868
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120251868
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 2740733..2741944
location: region:2740733-2741944:1
so has part: feature:2740733-2741944:1:exon

120251868
type: Gene
SIO_000068: ncbigene

position:2740733:1
position: 2740733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2741944:1
position: 2741944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2740733-2741944:1:exon

LOC120251868
type: Exon
subclass of: SO_0000147
RO_0002162: 55577
gene: LOC120251868
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
pseudo: true
SIO_010081: LOC120251868
subclass of: SO_0000673
so part of: LOC120251868
location: 2740733..2740740
location: region:2740733-2740740:1
so has part: feature:2740733-2740740:1:exon

position:2740740:1
position: 2740740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2740733-2740740:1:exon

LOC120251868
type: Exon
subclass of: SO_0000147
RO_0002162: 55577
gene: LOC120251868
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
pseudo: true
SIO_010081: LOC120251868
subclass of: SO_0000673
so part of: LOC120251868
location: 2741082..2741353
location: region:2741082-2741353:1
so has part: feature:2741082-2741353:1:exon

position:2741082:1
position: 2741082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2741353:1
position: 2741353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2741082-2741353:1:exon

LOC120251868
type: Exon
subclass of: SO_0000147
RO_0002162: 55577
gene: LOC120251868
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
pseudo: true
SIO_010081: LOC120251868
subclass of: SO_0000673
so part of: LOC120251868
location: 2741446..2741578
location: region:2741446-2741578:1
so has part: feature:2741446-2741578:1:exon

position:2741446:1
position: 2741446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2741578:1
position: 2741578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2741446-2741578:1:exon

LOC120251868
type: Exon
subclass of: SO_0000147
RO_0002162: 55577
gene: LOC120251868
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
pseudo: true
SIO_010081: LOC120251868
subclass of: SO_0000673
so part of: LOC120251868
location: 2741664..2741750
location: region:2741664-2741750:1
so has part: feature:2741664-2741750:1:exon

position:2741664:1
position: 2741664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2741750:1
position: 2741750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2741664-2741750:1:exon

LOC120251868
type: Exon
subclass of: SO_0000147
RO_0002162: 55577
gene: LOC120251868
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
pseudo: true
SIO_010081: LOC120251868
subclass of: SO_0000673
so part of: LOC120251868
location: 2741864..2741944
location: region:2741864-2741944:1
so has part: feature:2741864-2741944:1:exon

position:2741864:1
position: 2741864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2741864-2741944:1:exon

LOC120252435
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252435
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(2775887..2775995)
location: region:2775887-2775995:-1
so has part: feature:2775887-2775995:-1:exon
subclass of: SO_0000578

120252435
type: Gene
SIO_000068: ncbigene

position:2775887:-1
position: 2775887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2775995:-1
position: 2775995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2775887-2775995:-1:exon

LOC120252435
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252435
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533964.1
SIO_010081: LOC120252435
subclass of: SO_0000673
so part of: LOC120252435
location: complement(2775887..2775995)
location: region:2775887-2775995:-1
so has part: feature:2775887-2775995:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2775887-2775995:-1:exon

LOC120252120
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252120
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 2832467..2832573
location: region:2832467-2832573:1
so has part: feature:2832467-2832573:1:exon
subclass of: SO_0000578

120252120
type: Gene
SIO_000068: ncbigene

position:2832467:1
position: 2832467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2832573:1
position: 2832573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2832467-2832573:1:exon

LOC120252120
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252120
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533667.1
SIO_010081: LOC120252120
subclass of: SO_0000673
so part of: LOC120252120
location: 2832467..2832573
location: region:2832467-2832573:1
so has part: feature:2832467-2832573:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2832467-2832573:1:exon

LOC120252162
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252162
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 3015777..3015883
location: region:3015777-3015883:1
so has part: feature:3015777-3015883:1:exon
subclass of: SO_0000578

120252162
type: Gene
SIO_000068: ncbigene

position:3015777:1
position: 3015777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3015883:1
position: 3015883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3015777-3015883:1:exon

LOC120252162
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252162
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533707.1
SIO_010081: LOC120252162
subclass of: SO_0000673
so part of: LOC120252162
location: 3015777..3015883
location: region:3015777-3015883:1
so has part: feature:3015777-3015883:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3015777-3015883:1:exon

LOC120251871
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120251871
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 3086833..3092086
location: region:3086833-3092086:1
so has part: feature:3086833-3092086:1:exon

120251871
type: Gene
SIO_000068: ncbigene

position:3086833:1
position: 3086833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3092086:1
position: 3092086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3086833-3092086:1:exon

LOC120251871
type: Exon
subclass of: SO_0000147
RO_0002162: 55577
gene: LOC120251871
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins
pseudo: true
SIO_010081: LOC120251871
subclass of: SO_0000673
so part of: LOC120251871
location: 3086833..3086959
location: region:3086833-3086959:1
so has part: feature:3086833-3086959:1:exon

position:3086959:1
position: 3086959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3086833-3086959:1:exon

LOC120251871
type: Exon
subclass of: SO_0000147
RO_0002162: 55577
gene: LOC120251871
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins
pseudo: true
SIO_010081: LOC120251871
subclass of: SO_0000673
so part of: LOC120251871
location: 3087291..3087382
location: region:3087291-3087382:1
so has part: feature:3087291-3087382:1:exon

position:3087291:1
position: 3087291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3087382:1
position: 3087382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3087291-3087382:1:exon

LOC120251871
type: Exon
subclass of: SO_0000147
RO_0002162: 55577
gene: LOC120251871
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins
pseudo: true
SIO_010081: LOC120251871
subclass of: SO_0000673
so part of: LOC120251871
location: 3089875..3090122
location: region:3089875-3090122:1
so has part: feature:3089875-3090122:1:exon

position:3089875:1
position: 3089875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3090122:1
position: 3090122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3089875-3090122:1:exon

LOC120251871
type: Exon
subclass of: SO_0000147
RO_0002162: 55577
gene: LOC120251871
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins
pseudo: true
SIO_010081: LOC120251871
subclass of: SO_0000673
so part of: LOC120251871
location: 3090988..3092086
location: region:3090988-3092086:1
so has part: feature:3090988-3092086:1:exon

position:3090988:1
position: 3090988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3090988-3092086:1:exon

LOC120252073
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252073
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(3109735..3109841)
location: region:3109735-3109841:-1
so has part: feature:3109735-3109841:-1:exon
subclass of: SO_0000578

120252073
type: Gene
SIO_000068: ncbigene

position:3109735:-1
position: 3109735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3109841:-1
position: 3109841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3109735-3109841:-1:exon

LOC120252073
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252073
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533624.1
SIO_010081: LOC120252073
subclass of: SO_0000673
so part of: LOC120252073
location: complement(3109735..3109841)
location: region:3109735-3109841:-1
so has part: feature:3109735-3109841:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3109735-3109841:-1:exon

LOC120252030
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252030
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(3124052..3124158)
location: region:3124052-3124158:-1
so has part: feature:3124052-3124158:-1:exon
subclass of: SO_0000578

120252030
type: Gene
SIO_000068: ncbigene

position:3124052:-1
position: 3124052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3124158:-1
position: 3124158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3124052-3124158:-1:exon

LOC120252030
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252030
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533583.1
SIO_010081: LOC120252030
subclass of: SO_0000673
so part of: LOC120252030
location: complement(3124052..3124158)
location: region:3124052-3124158:-1
so has part: feature:3124052-3124158:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3124052-3124158:-1:exon

LOC120252351
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252351
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(3132321..3132427)
location: region:3132321-3132427:-1
so has part: feature:3132321-3132427:-1:exon
subclass of: SO_0000578

120252351
type: Gene
SIO_000068: ncbigene

position:3132321:-1
position: 3132321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3132427:-1
position: 3132427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3132321-3132427:-1:exon

LOC120252351
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252351
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533888.1
SIO_010081: LOC120252351
subclass of: SO_0000673
so part of: LOC120252351
location: complement(3132321..3132427)
location: region:3132321-3132427:-1
so has part: feature:3132321-3132427:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3132321-3132427:-1:exon

LOC120252352
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252352
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 3164438..3164544
location: region:3164438-3164544:1
so has part: feature:3164438-3164544:1:exon
subclass of: SO_0000578

120252352
type: Gene
SIO_000068: ncbigene

position:3164438:1
position: 3164438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3164544:1
position: 3164544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3164438-3164544:1:exon

LOC120252352
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252352
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533889.1
SIO_010081: LOC120252352
subclass of: SO_0000673
so part of: LOC120252352
location: 3164438..3164544
location: region:3164438-3164544:1
so has part: feature:3164438-3164544:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3164438-3164544:1:exon

LOC120251874
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120251874
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3237590..3238147)
location: region:3237590-3238147:-1
so has part: feature:3237590-3238147:-1:exon
subclass of: SO_0000010

120251874
type: Gene
SIO_000068: ncbigene

position:3237590:-1
position: 3237590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3238147:-1
position: 3238147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3237590-3238147:-1:exon

LOC120251874
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 55577
gene: LOC120251874
product: DNA-directed RNA polymerase subunit beta''-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_039260525.1
SIO_010081: LOC120251874
subclass of: SO_0000673
so part of: LOC120251874
location: complement(3237590..3238147)
location: region:3237590-3238147:-1
so has part: feature:3237590-3238147:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3237590-3238147:-1:exon

LOC120251874
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 55577
gene: LOC120251874
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA-directed RNA polymerase subunit beta''-like
translation: MGYTSHILDQSKILGFQQATATSISLGIDDLLTIPSKEWLVQDTEQQRFILEKHYHYANVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPSNPVHLMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQQIIVH
SIO_010081: LOC120251874
subclass of: SO_0000673
so part of: LOC120251874
location: complement(3237590..3238147)
location: region:3237590-3238147:-1
so has part: feature:3237590-3238147:-1:exon

XP_039116459.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3237590-3238147:-1:exon

LOC120251809
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120251809
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(3241202..3244849)
location: region:3241202-3244849:-1
so has part: feature:3241202-3244849:-1:exon

120251809
type: Gene
SIO_000068: ncbigene

position:3241202:-1
position: 3241202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3244849:-1
position: 3244849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3241202-3244849:-1:exon

LOC120251809
type: Exon
subclass of: SO_0000147
RO_0002162: 55577
gene: LOC120251809
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 58% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC120251809
subclass of: SO_0000673
so part of: LOC120251809
location: complement(3241202..3242816)
location: region:3241202-3242816:-1
so has part: feature:3241202-3242816:-1:exon

position:3242816:-1
position: 3242816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3241202-3242816:-1:exon

LOC120251809
type: Exon
subclass of: SO_0000147
RO_0002162: 55577
gene: LOC120251809
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 58% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC120251809
subclass of: SO_0000673
so part of: LOC120251809
location: complement(3244287..3244692)
location: region:3244287-3244692:-1
so has part: feature:3244287-3244692:-1:exon

position:3244287:-1
position: 3244287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3244692:-1
position: 3244692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3244287-3244692:-1:exon

LOC120251809
type: Exon
subclass of: SO_0000147
RO_0002162: 55577
gene: LOC120251809
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 58% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC120251809
subclass of: SO_0000673
so part of: LOC120251809
location: complement(3244731..3244849)
location: region:3244731-3244849:-1
so has part: feature:3244731-3244849:-1:exon

position:3244731:-1
position: 3244731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3244731-3244849:-1:exon

LOC120252130
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252130
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 3335041..3335147
location: region:3335041-3335147:1
so has part: feature:3335041-3335147:1:exon
subclass of: SO_0000578

120252130
type: Gene
SIO_000068: ncbigene

position:3335041:1
position: 3335041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3335147:1
position: 3335147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3335041-3335147:1:exon

LOC120252130
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252130
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533677.1
SIO_010081: LOC120252130
subclass of: SO_0000673
so part of: LOC120252130
location: 3335041..3335147
location: region:3335041-3335147:1
so has part: feature:3335041-3335147:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3335041-3335147:1:exon

LOC120251876
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120251876
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3383129..3383539)
location: region:3383129-3383539:-1
so has part: feature:3383129-3383539:-1:exon
subclass of: SO_0000010

120251876
type: Gene
SIO_000068: ncbigene

position:3383129:-1
position: 3383129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3383539:-1
position: 3383539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3383129-3383539:-1:exon

LOC120251876
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 55577
gene: LOC120251876
product: probable O-methyltransferase 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 81 Proteins
transcript id: XM_039260526.1
SIO_010081: LOC120251876
subclass of: SO_0000673
so part of: LOC120251876
location: complement(3383129..3383539)
location: region:3383129-3383539:-1
so has part: feature:3383129-3383539:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3383129-3383539:-1:exon

LOC120251876
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 55577
gene: LOC120251876
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable O-methyltransferase 3
translation: MRDSSHVWSPWLRTSKETPFEFYLGNRLGDVADEKLEFNKMFNDGMASDLVLVGDVVMMTCRDVFKGLKSFVEVGGGTKTMARAIAHVFPEVECTILDLPHKINTVKEDISLAEYFGGDMFVSVPLANATLSMDNF
SIO_010081: LOC120251876
subclass of: SO_0000673
so part of: LOC120251876
location: complement(3383129..3383539)
location: region:3383129-3383539:-1
so has part: feature:3383129-3383539:-1:exon

XP_039116460.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3383129-3383539:-1:exon

LOC120252053
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252053
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(3452037..3452143)
location: region:3452037-3452143:-1
so has part: feature:3452037-3452143:-1:exon
subclass of: SO_0000578

120252053
type: Gene
SIO_000068: ncbigene

position:3452037:-1
position: 3452037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3452143:-1
position: 3452143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3452037-3452143:-1:exon

LOC120252053
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252053
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533605.1
SIO_010081: LOC120252053
subclass of: SO_0000673
so part of: LOC120252053
location: complement(3452037..3452143)
location: region:3452037-3452143:-1
so has part: feature:3452037-3452143:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3452037-3452143:-1:exon

LOC120251928
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120251928
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3457923..3459288)
location: region:3457923-3459288:-1
so has part: feature:3457923-3459288:-1:exon
subclass of: SO_0000011

120251928
type: Gene
SIO_000068: ncbigene

position:3457923:-1
position: 3457923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3459288:-1
position: 3459288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3457923-3459288:-1:exon

LOC120251928
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: lncRNA
gene: LOC120251928
product: uncharacterized LOC120251928
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XR_005533525.1
SIO_010081: LOC120251928
subclass of: SO_0000673
so part of: LOC120251928
location: complement(join(3457923..3458203,3459235..3459288))
location: region:3457923-3459288:-1
so has part: feature:3459235-3459288:-1:exon
so has part: feature:3457923-3458203:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3459235-3459288:-1:exon

position:3459235:-1
position: 3459235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3457923-3458203:-1:exon

position:3458203:-1
position: 3458203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120252285
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252285
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 3469590..3469695
location: region:3469590-3469695:1
so has part: feature:3469590-3469695:1:exon
subclass of: SO_0000578

120252285
type: Gene
SIO_000068: ncbigene

position:3469590:1
position: 3469590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3469695:1
position: 3469695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3469590-3469695:1:exon

LOC120252285
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252285
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533828.1
SIO_010081: LOC120252285
subclass of: SO_0000673
so part of: LOC120252285
location: 3469590..3469695
location: region:3469590-3469695:1
so has part: feature:3469590-3469695:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3469590-3469695:1:exon

LOC120252175
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252175
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 3528017..3528123
location: region:3528017-3528123:1
so has part: feature:3528017-3528123:1:exon
subclass of: SO_0000578

120252175
type: Gene
SIO_000068: ncbigene

position:3528017:1
position: 3528017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3528123:1
position: 3528123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3528017-3528123:1:exon

LOC120252175
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252175
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533719.1
SIO_010081: LOC120252175
subclass of: SO_0000673
so part of: LOC120252175
location: 3528017..3528123
location: region:3528017-3528123:1
so has part: feature:3528017-3528123:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3528017-3528123:1:exon

LOC120251782
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120251782
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3537830..3539733)
location: region:3537830-3539733:-1
so has part: feature:3537830-3539733:-1:exon
subclass of: SO_0000010

120251782
type: Gene
SIO_000068: ncbigene

position:3537830:-1
position: 3537830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3539733:-1
position: 3539733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3537830-3539733:-1:exon

LOC120251782
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 55577
gene: LOC120251782
product: protein trichome birefringence-like 26
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_039260425.1
SIO_010081: LOC120251782
subclass of: SO_0000673
so part of: LOC120251782
location: complement(join(3537830..3538855,3538947..3539224,3539327..3539413,3539506..3539733))
location: region:3537830-3539733:-1
so has part: feature:3539506-3539733:-1:exon
so has part: feature:3539327-3539413:-1:exon
so has part: feature:3538947-3539224:-1:exon
so has part: feature:3537830-3538855:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3539506-3539733:-1:exon

position:3539506:-1
position: 3539506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3539327-3539413:-1:exon

position:3539327:-1
position: 3539327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3539413:-1
position: 3539413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3538947-3539224:-1:exon

position:3538947:-1
position: 3538947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3539224:-1
position: 3539224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3537830-3538855:-1:exon

position:3538855:-1
position: 3538855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120251782
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 55577
gene: LOC120251782
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein trichome birefringence-like 26
translation: MADEVMVGDHQPLLAKDGRSSISLIFFKLICIIFLAGAICYLFDSNFNAWAVEAEQFSLSLEKQDALNIRPPTKESTVQEQQLKKEECDLWVGEWIPSPAEPAYTNETCNLIPPYLNCLNNGRPDTGYLHWRWKPNACDLPPFDPLKFLNAMRDKSFAFIGDSICHGLVFSLICQLSKVEKPHDIYHDSAYNSRTWYYPSYNLTIYVIWAPYLIHYETTDNHGDASEIHLHLHLDILDSKWTNEYNNYDYVVISIGPHFYKSSIIYENNQVIGCHYCPHLELKKIAIDEIYRKALQLSLKSIATSKHKPFVILKTWSPDHSERGELPNEIVCNRTRPFKEWEINIGDHGFIMRRVEVEEFEKAAAIGASNGVRMKLLDTYHLSLLRPDGHPGPYRTYHPFDGDKKIKIDCMHWCLPGPVDTWNELLLQMVISGDADDSGSSLL
SIO_010081: LOC120251782
subclass of: SO_0000673
so part of: LOC120251782
location: complement(join(3538058..3538855,3538947..3539224,3539327..3539413,3539506..3539674))
location: region:3538058-3539674:-1
so has part: feature:3539506-3539674:-1:exon
so has part: feature:3539327-3539413:-1:exon
so has part: feature:3538947-3539224:-1:exon
so has part: feature:3538058-3538855:-1:exon

XP_039116359.1
type: Protein
SIO_000068: ncbiprotein

position:3538058:-1
position: 3538058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3539674:-1
position: 3539674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3539506-3539674:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3539327-3539413:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3538947-3539224:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3538058-3538855:-1:exon

LOC120251512
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120251512
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3553401..3560460)
location: region:3553401-3560460:-1
so has part: feature:3553401-3560460:-1:exon
subclass of: SO_0000010

120251512
type: Gene
SIO_000068: ncbigene

position:3553401:-1
position: 3553401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3560460:-1
position: 3560460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3553401-3560460:-1:exon

LOC120251512
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 55577
gene: LOC120251512
product: DAR GTPase 2, mitochondrial, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_039260051.1
SIO_010081: LOC120251512
subclass of: SO_0000673
so part of: LOC120251512
location: complement(join(3553401..3553768,3553987..3554168,3554253..3554349,3554597..3554667,3554755..3554902,3555018..3555095,3555187..3555291,3555629..3555789,3555853..3555957,3557552..3557666,3560270..3560460))
location: region:3553401-3560460:-1
so has part: feature:3560270-3560460:-1:exon
so has part: feature:3557552-3557666:-1:exon
so has part: feature:3555853-3555957:-1:exon
so has part: feature:3555629-3555789:-1:exon
so has part: feature:3555187-3555291:-1:exon
so has part: feature:3555018-3555095:-1:exon
so has part: feature:3554755-3554902:-1:exon
so has part: feature:3554597-3554667:-1:exon
so has part: feature:3554253-3554349:-1:exon
so has part: feature:3553987-3554168:-1:exon
so has part: feature:3553401-3553768:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3560270-3560460:-1:exon

position:3560270:-1
position: 3560270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3557552-3557666:-1:exon

position:3557552:-1
position: 3557552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3557666:-1
position: 3557666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3555853-3555957:-1:exon

position:3555853:-1
position: 3555853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3555957:-1
position: 3555957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3555629-3555789:-1:exon

position:3555629:-1
position: 3555629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3555789:-1
position: 3555789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3555187-3555291:-1:exon

position:3555187:-1
position: 3555187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3555291:-1
position: 3555291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3555018-3555095:-1:exon

position:3555018:-1
position: 3555018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3555095:-1
position: 3555095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3554755-3554902:-1:exon

position:3554755:-1
position: 3554755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3554902:-1
position: 3554902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3554597-3554667:-1:exon

position:3554597:-1
position: 3554597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3554667:-1
position: 3554667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3554253-3554349:-1:exon

position:3554253:-1
position: 3554253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3554349:-1
position: 3554349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3553987-3554168:-1:exon

position:3553987:-1
position: 3553987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3554168:-1
position: 3554168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3553401-3553768:-1:exon

position:3553768:-1
position: 3553768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120251512
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 55577
gene: LOC120251512
product: DAR GTPase 2, mitochondrial, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_039260049.1
SIO_010081: LOC120251512
subclass of: SO_0000673
so part of: LOC120251512
location: complement(join(3553401..3553768,3553987..3554168,3554253..3554349,3554597..3554667,3554755..3554902,3555018..3555095,3555187..3555291,3555629..3555789,3555853..3555957,3557552..3557666,3560219..3560460))
location: region:3553401-3560460:-1
so has part: feature:3560219-3560460:-1:exon
so has part: feature:3557552-3557666:-1:exon
so has part: feature:3555853-3555957:-1:exon
so has part: feature:3555629-3555789:-1:exon
so has part: feature:3555187-3555291:-1:exon
so has part: feature:3555018-3555095:-1:exon
so has part: feature:3554755-3554902:-1:exon
so has part: feature:3554597-3554667:-1:exon
so has part: feature:3554253-3554349:-1:exon
so has part: feature:3553987-3554168:-1:exon
so has part: feature:3553401-3553768:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3560219-3560460:-1:exon

position:3560219:-1
position: 3560219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3557552-3557666:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3555853-3555957:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3555629-3555789:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3555187-3555291:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3555018-3555095:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3554755-3554902:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3554597-3554667:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3554253-3554349:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3553987-3554168:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3553401-3553768:-1:exon

LOC120251512
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 55577
gene: LOC120251512
product: DAR GTPase 2, mitochondrial, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_039260052.1
SIO_010081: LOC120251512
subclass of: SO_0000673
so part of: LOC120251512
location: complement(join(3553401..3553768,3553987..3554168,3554253..3554349,3554597..3554667,3554755..3554902,3555018..3555095,3555187..3555291,3555629..3555957,3557552..3557666,3560219..3560458))
location: region:3553401-3560458:-1
so has part: feature:3560219-3560458:-1:exon
so has part: feature:3557552-3557666:-1:exon
so has part: feature:3555629-3555957:-1:exon
so has part: feature:3555187-3555291:-1:exon
so has part: feature:3555018-3555095:-1:exon
so has part: feature:3554755-3554902:-1:exon
so has part: feature:3554597-3554667:-1:exon
so has part: feature:3554253-3554349:-1:exon
so has part: feature:3553987-3554168:-1:exon
so has part: feature:3553401-3553768:-1:exon

position:3560458:-1
position: 3560458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3560219-3560458:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3557552-3557666:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3555629-3555957:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3555187-3555291:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3555018-3555095:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3554755-3554902:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3554597-3554667:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3554253-3554349:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3553987-3554168:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3553401-3553768:-1:exon

LOC120251512
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 55577
gene: LOC120251512
product: DAR GTPase 2, mitochondrial, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_039260054.1
SIO_010081: LOC120251512
subclass of: SO_0000673
so part of: LOC120251512
location: complement(join(3553401..3553768,3553987..3554168,3554253..3554349,3554597..3554667,3554755..3554902,3555018..3555095,3555187..3555291,3555629..3555789,3557552..3557666,3560219..3560456))
location: region:3553401-3560456:-1
so has part: feature:3560219-3560456:-1:exon
so has part: feature:3557552-3557666:-1:exon
so has part: feature:3555629-3555789:-1:exon
so has part: feature:3555187-3555291:-1:exon
so has part: feature:3555018-3555095:-1:exon
so has part: feature:3554755-3554902:-1:exon
so has part: feature:3554597-3554667:-1:exon
so has part: feature:3554253-3554349:-1:exon
so has part: feature:3553987-3554168:-1:exon
so has part: feature:3553401-3553768:-1:exon

position:3560456:-1
position: 3560456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3560219-3560456:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3557552-3557666:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3555629-3555789:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3555187-3555291:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3555018-3555095:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3554755-3554902:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3554597-3554667:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3554253-3554349:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3553987-3554168:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3553401-3553768:-1:exon

LOC120251512
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 55577
gene: LOC120251512
product: DAR GTPase 2, mitochondrial, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_039260053.1
SIO_010081: LOC120251512
subclass of: SO_0000673
so part of: LOC120251512
location: complement(join(3553401..3553768,3553987..3554168,3554253..3554349,3554597..3554667,3554755..3554902,3555018..3555095,3555187..3555291,3555629..3555767,3555853..3555957,3557552..3557666,3560219..3560456))
location: region:3553401-3560456:-1
so has part: feature:3560219-3560456:-1:exon
so has part: feature:3557552-3557666:-1:exon
so has part: feature:3555853-3555957:-1:exon
so has part: feature:3555629-3555767:-1:exon
so has part: feature:3555187-3555291:-1:exon
so has part: feature:3555018-3555095:-1:exon
so has part: feature:3554755-3554902:-1:exon
so has part: feature:3554597-3554667:-1:exon
so has part: feature:3554253-3554349:-1:exon
so has part: feature:3553987-3554168:-1:exon
so has part: feature:3553401-3553768:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3560219-3560456:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3557552-3557666:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3555853-3555957:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3555629-3555767:-1:exon

position:3555767:-1
position: 3555767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3555187-3555291:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3555018-3555095:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3554755-3554902:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3554597-3554667:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3554253-3554349:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3553987-3554168:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3553401-3553768:-1:exon

LOC120251512
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 55577
gene: LOC120251512
product: DAR GTPase 2, mitochondrial, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_039260050.1
SIO_010081: LOC120251512
subclass of: SO_0000673
so part of: LOC120251512
location: complement(join(3553401..3553768,3553987..3554168,3554253..3554349,3554597..3554667,3554755..3554902,3555018..3555095,3555187..3555291,3555629..3555789,3555853..3555957,3557552..3560152))
location: region:3553401-3560152:-1
so has part: feature:3557552-3560152:-1:exon
so has part: feature:3555853-3555957:-1:exon
so has part: feature:3555629-3555789:-1:exon
so has part: feature:3555187-3555291:-1:exon
so has part: feature:3555018-3555095:-1:exon
so has part: feature:3554755-3554902:-1:exon
so has part: feature:3554597-3554667:-1:exon
so has part: feature:3554253-3554349:-1:exon
so has part: feature:3553987-3554168:-1:exon
so has part: feature:3553401-3553768:-1:exon

position:3560152:-1
position: 3560152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3557552-3560152:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3555853-3555957:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3555629-3555789:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3555187-3555291:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3555018-3555095:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3554755-3554902:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3554597-3554667:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3554253-3554349:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3553987-3554168:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3553401-3553768:-1:exon

LOC120251512
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 55577
gene: LOC120251512
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DAR GTPase 2, mitochondrial isoform X1
translation: MLVPMCMLTVNLGLFWEEVTSLFAESVGAIVRELSLKKAADGLYGPCMAAFERAIIERVPLVDLVVEVRDARIPLTSAFEPLRRLACSHKQMIVLNKVDLADRSLTEMWLRHFKMHNFICYGVNSHNKDSINELLRVVRARIKKLKGDDRSYTSTILLVGIPNVGKSAMVNSMHQIGRTGAEVKGKLRHATVSSQPGETKDIISYKIGSHPNIYVLDTPGVLSGEIGVDDLGSKLALSGAIDDSLVGEVDLARYFLSVLNSKEEYKRWENLKADADDAVISTSEFNQGRRRQYPSDHTQDFIVRDVRRTLFRCISSNSVNLENENTMRILIENQLTALHEPLRLPKEPCEDSYKAVASKLLNLFRTGRLGRYTFDILPGITNDPILS
SIO_010081: LOC120251512
subclass of: SO_0000673
so part of: LOC120251512
location: complement(join(3553502..3553768,3553987..3554168,3554253..3554349,3554597..3554667,3554755..3554902,3555018..3555095,3555187..3555291,3555629..3555789,3555853..3555907))
location: region:3553502-3555907:-1
so has part: feature:3555853-3555907:-1:exon
so has part: feature:3555629-3555789:-1:exon
so has part: feature:3555187-3555291:-1:exon
so has part: feature:3555018-3555095:-1:exon
so has part: feature:3554755-3554902:-1:exon
so has part: feature:3554597-3554667:-1:exon
so has part: feature:3554253-3554349:-1:exon
so has part: feature:3553987-3554168:-1:exon
so has part: feature:3553502-3553768:-1:exon

XP_039115983.1
type: Protein
SIO_000068: ncbiprotein

position:3553502:-1
position: 3553502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3555907:-1
position: 3555907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3555853-3555907:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3555629-3555789:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3555187-3555291:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3555018-3555095:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3554755-3554902:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3554597-3554667:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3554253-3554349:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3553987-3554168:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3553502-3553768:-1:exon

LOC120251512
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 55577
gene: LOC120251512
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DAR GTPase 2, mitochondrial isoform X1
translation: MLVPMCMLTVNLGLFWEEVTSLFAESVGAIVRELSLKKAADGLYGPCMAAFERAIIERVPLVDLVVEVRDARIPLTSAFEPLRRLACSHKQMIVLNKVDLADRSLTEMWLRHFKMHNFICYGVNSHNKDSINELLRVVRARIKKLKGDDRSYTSTILLVGIPNVGKSAMVNSMHQIGRTGAEVKGKLRHATVSSQPGETKDIISYKIGSHPNIYVLDTPGVLSGEIGVDDLGSKLALSGAIDDSLVGEVDLARYFLSVLNSKEEYKRWENLKADADDAVISTSEFNQGRRRQYPSDHTQDFIVRDVRRTLFRCISSNSVNLENENTMRILIENQLTALHEPLRLPKEPCEDSYKAVASKLLNLFRTGRLGRYTFDILPGITNDPILS
SIO_010081: LOC120251512
subclass of: SO_0000673
so part of: LOC120251512
location: complement(join(3553502..3553768,3553987..3554168,3554253..3554349,3554597..3554667,3554755..3554902,3555018..3555095,3555187..3555291,3555629..3555789,3555853..3555907))
location: region:3553502-3555907:-1
so has part: feature:3555853-3555907:-1:exon
so has part: feature:3555629-3555789:-1:exon
so has part: feature:3555187-3555291:-1:exon
so has part: feature:3555018-3555095:-1:exon
so has part: feature:3554755-3554902:-1:exon
so has part: feature:3554597-3554667:-1:exon
so has part: feature:3554253-3554349:-1:exon
so has part: feature:3553987-3554168:-1:exon
so has part: feature:3553502-3553768:-1:exon

XP_039115984.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3555853-3555907:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3555629-3555789:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3555187-3555291:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3555018-3555095:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3554755-3554902:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3554597-3554667:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3554253-3554349:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3553987-3554168:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3553502-3553768:-1:exon

LOC120251512
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 55577
gene: LOC120251512
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DAR GTPase 2, mitochondrial isoform X1
translation: MLVPMCMLTVNLGLFWEEVTSLFAESVGAIVRELSLKKAADGLYGPCMAAFERAIIERVPLVDLVVEVRDARIPLTSAFEPLRRLACSHKQMIVLNKVDLADRSLTEMWLRHFKMHNFICYGVNSHNKDSINELLRVVRARIKKLKGDDRSYTSTILLVGIPNVGKSAMVNSMHQIGRTGAEVKGKLRHATVSSQPGETKDIISYKIGSHPNIYVLDTPGVLSGEIGVDDLGSKLALSGAIDDSLVGEVDLARYFLSVLNSKEEYKRWENLKADADDAVISTSEFNQGRRRQYPSDHTQDFIVRDVRRTLFRCISSNSVNLENENTMRILIENQLTALHEPLRLPKEPCEDSYKAVASKLLNLFRTGRLGRYTFDILPGITNDPILS
SIO_010081: LOC120251512
subclass of: SO_0000673
so part of: LOC120251512
location: complement(join(3553502..3553768,3553987..3554168,3554253..3554349,3554597..3554667,3554755..3554902,3555018..3555095,3555187..3555291,3555629..3555789,3555853..3555907))
location: region:3553502-3555907:-1
so has part: feature:3555853-3555907:-1:exon
so has part: feature:3555629-3555789:-1:exon
so has part: feature:3555187-3555291:-1:exon
so has part: feature:3555018-3555095:-1:exon
so has part: feature:3554755-3554902:-1:exon
so has part: feature:3554597-3554667:-1:exon
so has part: feature:3554253-3554349:-1:exon
so has part: feature:3553987-3554168:-1:exon
so has part: feature:3553502-3553768:-1:exon

XP_039115985.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3555853-3555907:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3555629-3555789:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3555187-3555291:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3555018-3555095:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3554755-3554902:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3554597-3554667:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3554253-3554349:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3553987-3554168:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3553502-3553768:-1:exon

LOC120251512
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 55577
gene: LOC120251512
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DAR GTPase 2, mitochondrial isoform X2
translation: MAAMAVTSLFAESVGAIVRELSLKKAADGLYGPCMAAFERAIIERVPLVDLVVEVRDARIPLTSAFEPLRRLACSHKQMIVLNKVDLADRSLTEMWLRHFKMHNFICYGVNSHNKDSINELLRVVRARIKKLKGDDRSYTSTILLVGIPNVGKSAMVNSMHQIGRTGAEVKGKLRHATVSSQPGETKDIISYKIGSHPNIYVLDTPGVLSGEIGVDDLGSKLALSGAIDDSLVGEVDLARYFLSVLNSKEEYKRWENLKADADDAVISTSEFNQGRRRQYPSDHTQDFIVRDVRRTLFRCISSNSVNLENENTMRILIENQLTALHEPLRLPKEPCEDSYKAVASKLLNLFRTGRLGRYTFDILPGITNDPILS
SIO_010081: LOC120251512
subclass of: SO_0000673
so part of: LOC120251512
location: complement(join(3553502..3553768,3553987..3554168,3554253..3554349,3554597..3554667,3554755..3554902,3555018..3555095,3555187..3555291,3555629..3555805))
location: region:3553502-3555805:-1
so has part: feature:3555629-3555805:-1:exon
so has part: feature:3555187-3555291:-1:exon
so has part: feature:3555018-3555095:-1:exon
so has part: feature:3554755-3554902:-1:exon
so has part: feature:3554597-3554667:-1:exon
so has part: feature:3554253-3554349:-1:exon
so has part: feature:3553987-3554168:-1:exon
so has part: feature:3553502-3553768:-1:exon

XP_039115986.1
type: Protein
SIO_000068: ncbiprotein

position:3555805:-1
position: 3555805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3555629-3555805:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3555187-3555291:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3555018-3555095:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3554755-3554902:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3554597-3554667:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3554253-3554349:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3553987-3554168:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3553502-3553768:-1:exon

LOC120251512
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 55577
gene: LOC120251512
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DAR GTPase 2, mitochondrial isoform X3
translation: MAAFERAIIERVPLVDLVVEVRDARIPLTSAFEPLRRLACSHKQMIVLNKVDLADRSLTEMWLRHFKMHNFICYGVNSHNKDSINELLRVVRARIKKLKGDDRSYTSTILLVGIPNVGKSAMVNSMHQIGRTGAEVKGKLRHATVSSQPGETKDIISYKIGSHPNIYVLDTPGVLSGEIGVDDLGSKLALSGAIDDSLVGEVDLARYFLSVLNSKEEYKRWENLKADADDAVISTSEFNQGRRRQYPSDHTQDFIVRDVRRTLFRCISSNSVNLENENTMRILIENQLTALHEPLRLPKEPCEDSYKAVASKLLNLFRTGRLGRYTFDILPGITNDPILS
SIO_010081: LOC120251512
subclass of: SO_0000673
so part of: LOC120251512
location: complement(join(3553502..3553768,3553987..3554168,3554253..3554349,3554597..3554667,3554755..3554902,3555018..3555095,3555187..3555291,3555629..3555703))
location: region:3553502-3555703:-1
so has part: feature:3555629-3555703:-1:exon
so has part: feature:3555187-3555291:-1:exon
so has part: feature:3555018-3555095:-1:exon
so has part: feature:3554755-3554902:-1:exon
so has part: feature:3554597-3554667:-1:exon
so has part: feature:3554253-3554349:-1:exon
so has part: feature:3553987-3554168:-1:exon
so has part: feature:3553502-3553768:-1:exon

XP_039115987.1
type: Protein
SIO_000068: ncbiprotein

position:3555703:-1
position: 3555703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3555629-3555703:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3555187-3555291:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3555018-3555095:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3554755-3554902:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3554597-3554667:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3554253-3554349:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3553987-3554168:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3553502-3553768:-1:exon

LOC120251512
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 55577
gene: LOC120251512
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DAR GTPase 2, mitochondrial isoform X3
translation: MAAFERAIIERVPLVDLVVEVRDARIPLTSAFEPLRRLACSHKQMIVLNKVDLADRSLTEMWLRHFKMHNFICYGVNSHNKDSINELLRVVRARIKKLKGDDRSYTSTILLVGIPNVGKSAMVNSMHQIGRTGAEVKGKLRHATVSSQPGETKDIISYKIGSHPNIYVLDTPGVLSGEIGVDDLGSKLALSGAIDDSLVGEVDLARYFLSVLNSKEEYKRWENLKADADDAVISTSEFNQGRRRQYPSDHTQDFIVRDVRRTLFRCISSNSVNLENENTMRILIENQLTALHEPLRLPKEPCEDSYKAVASKLLNLFRTGRLGRYTFDILPGITNDPILS
SIO_010081: LOC120251512
subclass of: SO_0000673
so part of: LOC120251512
location: complement(join(3553502..3553768,3553987..3554168,3554253..3554349,3554597..3554667,3554755..3554902,3555018..3555095,3555187..3555291,3555629..3555703))
location: region:3553502-3555703:-1
so has part: feature:3555629-3555703:-1:exon
so has part: feature:3555187-3555291:-1:exon
so has part: feature:3555018-3555095:-1:exon
so has part: feature:3554755-3554902:-1:exon
so has part: feature:3554597-3554667:-1:exon
so has part: feature:3554253-3554349:-1:exon
so has part: feature:3553987-3554168:-1:exon
so has part: feature:3553502-3553768:-1:exon

XP_039115988.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3555629-3555703:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3555187-3555291:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3555018-3555095:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3554755-3554902:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3554597-3554667:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3554253-3554349:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3553987-3554168:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3553502-3553768:-1:exon

LOC120251926
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120251926
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3570797..3575089)
location: region:3570797-3575089:-1
so has part: feature:3570797-3575089:-1:exon
subclass of: SO_0000010

120251926
type: Gene
SIO_000068: ncbigene

position:3570797:-1
position: 3570797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3575089:-1
position: 3575089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3570797-3575089:-1:exon

LOC120251926
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 55577
gene: LOC120251926
product: syntaxin-61-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_039260574.1
SIO_010081: LOC120251926
subclass of: SO_0000673
so part of: LOC120251926
location: complement(join(3570797..3571062,3571254..3571319,3571888..3571978,3572815..3573008,3573276..3573389,3573623..3573736,3574599..3574694,3574984..3575089))
location: region:3570797-3575089:-1
so has part: feature:3574984-3575089:-1:exon
so has part: feature:3574599-3574694:-1:exon
so has part: feature:3573623-3573736:-1:exon
so has part: feature:3573276-3573389:-1:exon
so has part: feature:3572815-3573008:-1:exon
so has part: feature:3571888-3571978:-1:exon
so has part: feature:3571254-3571319:-1:exon
so has part: feature:3570797-3571062:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3574984-3575089:-1:exon

position:3574984:-1
position: 3574984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3574599-3574694:-1:exon

position:3574599:-1
position: 3574599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3574694:-1
position: 3574694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3573623-3573736:-1:exon

position:3573623:-1
position: 3573623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3573736:-1
position: 3573736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3573276-3573389:-1:exon

position:3573276:-1
position: 3573276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3573389:-1
position: 3573389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3572815-3573008:-1:exon

position:3572815:-1
position: 3572815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3573008:-1
position: 3573008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3571888-3571978:-1:exon

position:3571888:-1
position: 3571888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3571978:-1
position: 3571978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3571254-3571319:-1:exon

position:3571254:-1
position: 3571254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3571319:-1
position: 3571319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3570797-3571062:-1:exon

position:3571062:-1
position: 3571062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120251926
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 55577
gene: LOC120251926
product: syntaxin-61-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_039260575.1
SIO_010081: LOC120251926
subclass of: SO_0000673
so part of: LOC120251926
location: complement(join(3570797..3571062,3571254..3571319,3571888..3571978,3572815..3573008,3573276..3573389,3573623..3573736,3574599..3574697,3574984..3575084))
location: region:3570797-3575084:-1
so has part: feature:3574984-3575084:-1:exon
so has part: feature:3574599-3574697:-1:exon
so has part: feature:3573623-3573736:-1:exon
so has part: feature:3573276-3573389:-1:exon
so has part: feature:3572815-3573008:-1:exon
so has part: feature:3571888-3571978:-1:exon
so has part: feature:3571254-3571319:-1:exon
so has part: feature:3570797-3571062:-1:exon

position:3575084:-1
position: 3575084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3574984-3575084:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3574599-3574697:-1:exon

position:3574697:-1
position: 3574697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3573623-3573736:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3573276-3573389:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3572815-3573008:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3571888-3571978:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3571254-3571319:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3570797-3571062:-1:exon

LOC120251926
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 55577
gene: LOC120251926
product: syntaxin-61-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_039260576.1
SIO_010081: LOC120251926
subclass of: SO_0000673
so part of: LOC120251926
location: complement(join(3570797..3571062,3571254..3571319,3571888..3571978,3572815..3573008,3573276..3573389,3573623..3573736,3574599..3574694,3574801..3574968))
location: region:3570797-3574968:-1
so has part: feature:3574801-3574968:-1:exon
so has part: feature:3574599-3574694:-1:exon
so has part: feature:3573623-3573736:-1:exon
so has part: feature:3573276-3573389:-1:exon
so has part: feature:3572815-3573008:-1:exon
so has part: feature:3571888-3571978:-1:exon
so has part: feature:3571254-3571319:-1:exon
so has part: feature:3570797-3571062:-1:exon

position:3574968:-1
position: 3574968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3574801-3574968:-1:exon

position:3574801:-1
position: 3574801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3574599-3574694:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3573623-3573736:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3573276-3573389:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3572815-3573008:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3571888-3571978:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3571254-3571319:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3570797-3571062:-1:exon

LOC120251926
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 55577
gene: LOC120251926
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: syntaxin-61-like
translation: MTPAQDPFYIVKEEIQESIDKLQATFHQWGETPSNTGEWVHLSKELVTSCESIEWQVDELDKTVAVAARDPAWYGLDVQELDKRKRWTKTAHTQVDTIRKTLEAGREKSSVIGSSYNGGRRELMRLPNDSASQTGTSHPYHDNEEFITSESDRQMLLIKQQDEELDELSASVQRIGGVGLTIHEELIGQEKILDELSLEMETASNRLDFVQKRVAMVMKKAGAKGQFMMIAFLLVLFIILFVLVFFT
SIO_010081: LOC120251926
subclass of: SO_0000673
so part of: LOC120251926
location: complement(join(3570952..3571062,3571254..3571319,3571888..3571978,3572815..3573008,3573276..3573389,3573623..3573736,3574599..3574652))
location: region:3570952-3574652:-1
so has part: feature:3574599-3574652:-1:exon
so has part: feature:3573623-3573736:-1:exon
so has part: feature:3573276-3573389:-1:exon
so has part: feature:3572815-3573008:-1:exon
so has part: feature:3571888-3571978:-1:exon
so has part: feature:3571254-3571319:-1:exon
so has part: feature:3570952-3571062:-1:exon

XP_039116508.1
type: Protein
SIO_000068: ncbiprotein

position:3570952:-1
position: 3570952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3574652:-1
position: 3574652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3574599-3574652:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3573623-3573736:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3573276-3573389:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3572815-3573008:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3571888-3571978:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3571254-3571319:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3570952-3571062:-1:exon

LOC120251926
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 55577
gene: LOC120251926
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: syntaxin-61-like
translation: MTPAQDPFYIVKEEIQESIDKLQATFHQWGETPSNTGEWVHLSKELVTSCESIEWQVDELDKTVAVAARDPAWYGLDVQELDKRKRWTKTAHTQVDTIRKTLEAGREKSSVIGSSYNGGRRELMRLPNDSASQTGTSHPYHDNEEFITSESDRQMLLIKQQDEELDELSASVQRIGGVGLTIHEELIGQEKILDELSLEMETASNRLDFVQKRVAMVMKKAGAKGQFMMIAFLLVLFIILFVLVFFT
SIO_010081: LOC120251926
subclass of: SO_0000673
so part of: LOC120251926
location: complement(join(3570952..3571062,3571254..3571319,3571888..3571978,3572815..3573008,3573276..3573389,3573623..3573736,3574599..3574652))
location: region:3570952-3574652:-1
so has part: feature:3574599-3574652:-1:exon
so has part: feature:3573623-3573736:-1:exon
so has part: feature:3573276-3573389:-1:exon
so has part: feature:3572815-3573008:-1:exon
so has part: feature:3571888-3571978:-1:exon
so has part: feature:3571254-3571319:-1:exon
so has part: feature:3570952-3571062:-1:exon

XP_039116509.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3574599-3574652:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3573623-3573736:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3573276-3573389:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3572815-3573008:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3571888-3571978:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3571254-3571319:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3570952-3571062:-1:exon

LOC120251926
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 55577
gene: LOC120251926
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: syntaxin-61-like
translation: MTPAQDPFYIVKEEIQESIDKLQATFHQWGETPSNTGEWVHLSKELVTSCESIEWQVDELDKTVAVAARDPAWYGLDVQELDKRKRWTKTAHTQVDTIRKTLEAGREKSSVIGSSYNGGRRELMRLPNDSASQTGTSHPYHDNEEFITSESDRQMLLIKQQDEELDELSASVQRIGGVGLTIHEELIGQEKILDELSLEMETASNRLDFVQKRVAMVMKKAGAKGQFMMIAFLLVLFIILFVLVFFT
SIO_010081: LOC120251926
subclass of: SO_0000673
so part of: LOC120251926
location: complement(join(3570952..3571062,3571254..3571319,3571888..3571978,3572815..3573008,3573276..3573389,3573623..3573736,3574599..3574652))
location: region:3570952-3574652:-1
so has part: feature:3574599-3574652:-1:exon
so has part: feature:3573623-3573736:-1:exon
so has part: feature:3573276-3573389:-1:exon
so has part: feature:3572815-3573008:-1:exon
so has part: feature:3571888-3571978:-1:exon
so has part: feature:3571254-3571319:-1:exon
so has part: feature:3570952-3571062:-1:exon

XP_039116510.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3574599-3574652:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3573623-3573736:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3573276-3573389:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3572815-3573008:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3571888-3571978:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3571254-3571319:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3570952-3571062:-1:exon

LOC120251926
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 55577
gene: LOC120251926
product: syntaxin-61-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XR_005533524.1
SIO_010081: LOC120251926
so part of: LOC120251926
location: complement(join(3571254..3571319,3571432..3571596,3571888..3571978,3572815..3573008,3573276..3573389,3573623..3573736,3574599..3574694,3574984..3575089))
location: region:3571254-3575089:-1
so has part: feature:3574984-3575089:-1:exon
so has part: feature:3574599-3574694:-1:exon
so has part: feature:3573623-3573736:-1:exon
so has part: feature:3573276-3573389:-1:exon
so has part: feature:3572815-3573008:-1:exon
so has part: feature:3571888-3571978:-1:exon
so has part: feature:3571432-3571596:-1:exon
so has part: feature:3571254-3571319:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3574984-3575089:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3574599-3574694:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3573623-3573736:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3573276-3573389:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3572815-3573008:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3571888-3571978:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3571432-3571596:-1:exon

position:3571432:-1
position: 3571432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3571596:-1
position: 3571596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3571254-3571319:-1:exon

LOC120251494
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120251494
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 3588075..3588568
location: region:3588075-3588568:1
so has part: feature:3588075-3588568:1:exon

120251494
type: Gene
SIO_000068: ncbigene

position:3588075:1
position: 3588075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3588568:1
position: 3588568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3588075-3588568:1:exon

LOC120251494
type: Exon
subclass of: SO_0000147
RO_0002162: 55577
gene: LOC120251494
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC120251494
subclass of: SO_0000673
so part of: LOC120251494
location: 3588075..3588568
location: region:3588075-3588568:1
so has part: feature:3588075-3588568:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3588075-3588568:1:exon

LOC120251680
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120251680
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3624007..3631240
location: region:3624007-3631240:1
so has part: feature:3624007-3631240:1:exon
subclass of: SO_0000010

120251680
type: Gene
SIO_000068: ncbigene

position:3624007:1
position: 3624007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3631240:1
position: 3631240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3624007-3631240:1:exon

LOC120251680
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 55577
gene: LOC120251680
product: glutathione reductase, chloroplastic-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XR_005533472.1
SIO_010081: LOC120251680
so part of: LOC120251680
location: join(3624007..3624461,3625447..3625672,3625782..3626060,3626152..3626328,3626422..3626475,3626584..3626732,3629909..3629967,3630044..3630214,3630312..3630449)
location: region:3624007-3630449:1
so has part: feature:3624007-3624461:1:exon
so has part: feature:3625447-3625672:1:exon
so has part: feature:3625782-3626060:1:exon
so has part: feature:3626152-3626328:1:exon
so has part: feature:3626422-3626475:1:exon
so has part: feature:3626584-3626732:1:exon
so has part: feature:3629909-3629967:1:exon
so has part: feature:3630044-3630214:1:exon
so has part: feature:3630312-3630449:1:exon

position:3630449:1
position: 3630449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3624007-3624461:1:exon

position:3624461:1
position: 3624461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3625447-3625672:1:exon

position:3625447:1
position: 3625447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3625672:1
position: 3625672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3625782-3626060:1:exon

position:3625782:1
position: 3625782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3626060:1
position: 3626060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3626152-3626328:1:exon

position:3626152:1
position: 3626152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3626328:1
position: 3626328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3626422-3626475:1:exon

position:3626422:1
position: 3626422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3626475:1
position: 3626475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3626584-3626732:1:exon

position:3626584:1
position: 3626584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3626732:1
position: 3626732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3629909-3629967:1:exon

position:3629909:1
position: 3629909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3629967:1
position: 3629967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3630044-3630214:1:exon

position:3630044:1
position: 3630044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3630214:1
position: 3630214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3630312-3630449:1:exon

position:3630312:1
position: 3630312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120251680
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 55577
gene: LOC120251680
product: glutathione reductase, chloroplastic-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_039260292.1
SIO_010081: LOC120251680
subclass of: SO_0000673
so part of: LOC120251680
location: join(3624008..3624461,3625447..3625672,3625782..3626060,3626152..3626328,3626422..3626475,3626584..3626732,3629904..3629967,3630044..3630214,3630312..3630449,3630663..3630715,3630798..3631240)
location: region:3624008-3631240:1
so has part: feature:3624008-3624461:1:exon
so has part: feature:3625447-3625672:1:exon
so has part: feature:3625782-3626060:1:exon
so has part: feature:3626152-3626328:1:exon
so has part: feature:3626422-3626475:1:exon
so has part: feature:3626584-3626732:1:exon
so has part: feature:3629904-3629967:1:exon
so has part: feature:3630044-3630214:1:exon
so has part: feature:3630312-3630449:1:exon
so has part: feature:3630663-3630715:1:exon
so has part: feature:3630798-3631240:1:exon

position:3624008:1
position: 3624008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3624008-3624461:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3625447-3625672:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3625782-3626060:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3626152-3626328:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3626422-3626475:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3626584-3626732:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3629904-3629967:1:exon

position:3629904:1
position: 3629904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3630044-3630214:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3630312-3630449:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3630663-3630715:1:exon

position:3630663:1
position: 3630663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3630715:1
position: 3630715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3630798-3631240:1:exon

position:3630798:1
position: 3630798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120251680
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 55577
gene: LOC120251680
product: glutathione reductase, chloroplastic-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_039260293.1
SIO_010081: LOC120251680
subclass of: SO_0000673
so part of: LOC120251680
location: join(3624008..3624461,3625447..3625672,3625782..3626060,3626152..3626328,3626422..3626472,3626584..3626732,3629904..3629967,3630044..3630214,3630312..3630449,3630663..3630715,3630798..3631240)
location: region:3624008-3631240:1
so has part: feature:3624008-3624461:1:exon
so has part: feature:3625447-3625672:1:exon
so has part: feature:3625782-3626060:1:exon
so has part: feature:3626152-3626328:1:exon
so has part: feature:3626422-3626472:1:exon
so has part: feature:3626584-3626732:1:exon
so has part: feature:3629904-3629967:1:exon
so has part: feature:3630044-3630214:1:exon
so has part: feature:3630312-3630449:1:exon
so has part: feature:3630663-3630715:1:exon
so has part: feature:3630798-3631240:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3624008-3624461:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3625447-3625672:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3625782-3626060:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3626152-3626328:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3626422-3626472:1:exon

position:3626472:1
position: 3626472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3626584-3626732:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3629904-3629967:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3630044-3630214:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3630312-3630449:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3630663-3630715:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3630798-3631240:1:exon

LOC120251680
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 55577
gene: LOC120251680
product: glutathione reductase, chloroplastic-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XR_005533471.1
SIO_010081: LOC120251680
so part of: LOC120251680
location: join(3624008..3624461,3625447..3625672,3625782..3626060,3626152..3626328,3626422..3626475,3626584..3626732,3629904..3629967,3630044..3630214,3630328..3630449,3630663..3630715)
location: region:3624008-3630715:1
so has part: feature:3624008-3624461:1:exon
so has part: feature:3625447-3625672:1:exon
so has part: feature:3625782-3626060:1:exon
so has part: feature:3626152-3626328:1:exon
so has part: feature:3626422-3626475:1:exon
so has part: feature:3626584-3626732:1:exon
so has part: feature:3629904-3629967:1:exon
so has part: feature:3630044-3630214:1:exon
so has part: feature:3630328-3630449:1:exon
so has part: feature:3630663-3630715:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3624008-3624461:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3625447-3625672:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3625782-3626060:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3626152-3626328:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3626422-3626475:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3626584-3626732:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3629904-3629967:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3630044-3630214:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3630328-3630449:1:exon

position:3630328:1
position: 3630328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3630663-3630715:1:exon

LOC120251680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 55577
gene: LOC120251680
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glutathione reductase, chloroplastic-like isoform X1
translation: MAMAATSLGTSRIPFPPSTLQTLTRGLPSISFLSLPKPFFSTSSVSSSSSSSSSSALRSTVFNHTRRRRLISVRAGTENGPGDSKRFDFDLFTIGAGSGGVRASRFAASYGATVAICELPFSTISSDNSGGVGGTCVLRGCVPKKLLVYSSKYSHEFEESHGFGWNYEVDPEHDWNILMANKNAELQRLTGIYQNILKNSGVTLIEGRGKIIDPHTVDVNGKLYSARHILVSVGSRPFILDIPGKEYAIDSDAALDLPSKPEKIAIVGGGYIALEFAGIFNGLKSDVHVFIRQKKVLRGFDEEIREFVAEQMSLRGIEFHTEESPQAILKASDGSFSLKTNKETVDGFSHVMFATGRRPNTKNLGLEEVGVELAKNGAIVVNEYSQTAVDSIWAVGDATDRINLTPVALMEGMAFAKTVFGGEPTKPNYSAVPSAVFSQPPIGQVGLTEEQAIQEYGDVDIFTANFRPLKATLSGLPDRVLMKLIVCANTKKVLGVHMCGEDSPEIIQGIAIAVKAGLTKADFDATVGIHPTSAEEFVTMRSPTRKIRRSPASEGKTEEIKSAA
SIO_010081: LOC120251680
subclass of: SO_0000673
so part of: LOC120251680
location: join(3624058..3624461,3625447..3625672,3625782..3626060,3626152..3626328,3626422..3626475,3626584..3626732,3629904..3629967,3630044..3630214,3630312..3630449,3630663..3630695)
location: region:3624058-3630695:1
so has part: feature:3624058-3624461:1:exon
so has part: feature:3625447-3625672:1:exon
so has part: feature:3625782-3626060:1:exon
so has part: feature:3626152-3626328:1:exon
so has part: feature:3626422-3626475:1:exon
so has part: feature:3626584-3626732:1:exon
so has part: feature:3629904-3629967:1:exon
so has part: feature:3630044-3630214:1:exon
so has part: feature:3630312-3630449:1:exon
so has part: feature:3630663-3630695:1:exon

XP_039116226.1
type: Protein
SIO_000068: ncbiprotein

position:3624058:1
position: 3624058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3630695:1
position: 3630695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3624058-3624461:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3625447-3625672:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3625782-3626060:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3626152-3626328:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3626422-3626475:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3626584-3626732:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3629904-3629967:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3630044-3630214:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3630312-3630449:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3630663-3630695:1:exon

LOC120251680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 55577
gene: LOC120251680
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glutathione reductase, chloroplastic-like isoform X2
translation: MAMAATSLGTSRIPFPPSTLQTLTRGLPSISFLSLPKPFFSTSSVSSSSSSSSSSALRSTVFNHTRRRRLISVRAGTENGPGDSKRFDFDLFTIGAGSGGVRASRFAASYGATVAICELPFSTISSDNSGGVGGTCVLRGCVPKKLLVYSSKYSHEFEESHGFGWNYEVDPEHDWNILMANKNAELQRLTGIYQNILKNSGVTLIEGRGKIIDPHTVDVNGKLYSARHILVSVGSRPFILDIPGKEYAIDSDAALDLPSKPEKIAIVGGGYIALEFAGIFNGLKSDVHVFIRQKKVLRGFDEEIREFVAEQMSLRGIEFHTEESPQAILKASDGSFSLKTNKETVDGFSHVMFATGRRPNTKNLGLEEVGVELAKNGAIVNEYSQTAVDSIWAVGDATDRINLTPVALMEGMAFAKTVFGGEPTKPNYSAVPSAVFSQPPIGQVGLTEEQAIQEYGDVDIFTANFRPLKATLSGLPDRVLMKLIVCANTKKVLGVHMCGEDSPEIIQGIAIAVKAGLTKADFDATVGIHPTSAEEFVTMRSPTRKIRRSPASEGKTEEIKSAA
SIO_010081: LOC120251680
subclass of: SO_0000673
so part of: LOC120251680
location: join(3624058..3624461,3625447..3625672,3625782..3626060,3626152..3626328,3626422..3626472,3626584..3626732,3629904..3629967,3630044..3630214,3630312..3630449,3630663..3630695)
location: region:3624058-3630695:1
so has part: feature:3624058-3624461:1:exon
so has part: feature:3625447-3625672:1:exon
so has part: feature:3625782-3626060:1:exon
so has part: feature:3626152-3626328:1:exon
so has part: feature:3626422-3626472:1:exon
so has part: feature:3626584-3626732:1:exon
so has part: feature:3629904-3629967:1:exon
so has part: feature:3630044-3630214:1:exon
so has part: feature:3630312-3630449:1:exon
so has part: feature:3630663-3630695:1:exon

XP_039116227.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3624058-3624461:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3625447-3625672:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3625782-3626060:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3626152-3626328:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3626422-3626472:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3626584-3626732:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3629904-3629967:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3630044-3630214:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3630312-3630449:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3630663-3630695:1:exon

LOC120252040
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252040
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 3662329..3662434
location: region:3662329-3662434:1
so has part: feature:3662329-3662434:1:exon
subclass of: SO_0000578

120252040
type: Gene
SIO_000068: ncbigene

position:3662329:1
position: 3662329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3662434:1
position: 3662434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3662329-3662434:1:exon

LOC120252040
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252040
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533593.1
SIO_010081: LOC120252040
subclass of: SO_0000673
so part of: LOC120252040
location: 3662329..3662434
location: region:3662329-3662434:1
so has part: feature:3662329-3662434:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3662329-3662434:1:exon

LOC120251768
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120251768
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3673385..3682208
location: region:3673385-3682208:1
so has part: feature:3673385-3682208:1:exon
subclass of: SO_0000010

120251768
type: Gene
SIO_000068: ncbigene

position:3673385:1
position: 3673385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3682208:1
position: 3682208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3673385-3682208:1:exon

LOC120251768
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 55577
gene: LOC120251768
product: uncharacterized protein At4g18490
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_039260412.1
SIO_010081: LOC120251768
subclass of: SO_0000673
so part of: LOC120251768
location: join(3673385..3673500,3675657..3675728,3676065..3676185,3676331..3676507,3676603..3677421,3677890..3678066,3678886..3679035,3679167..3679344,3680006..3680073,3680153..3680192,3680301..3680447,3681785..3681895,3681984..3682076,3682197..3682208)
location: region:3673385-3682208:1
so has part: feature:3673385-3673500:1:exon
so has part: feature:3675657-3675728:1:exon
so has part: feature:3676065-3676185:1:exon
so has part: feature:3676331-3676507:1:exon
so has part: feature:3676603-3677421:1:exon
so has part: feature:3677890-3678066:1:exon
so has part: feature:3678886-3679035:1:exon
so has part: feature:3679167-3679344:1:exon
so has part: feature:3680006-3680073:1:exon
so has part: feature:3680153-3680192:1:exon
so has part: feature:3680301-3680447:1:exon
so has part: feature:3681785-3681895:1:exon
so has part: feature:3681984-3682076:1:exon
so has part: feature:3682197-3682208:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3673385-3673500:1:exon

position:3673500:1
position: 3673500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3675657-3675728:1:exon

position:3675657:1
position: 3675657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3675728:1
position: 3675728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3676065-3676185:1:exon

position:3676065:1
position: 3676065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3676185:1
position: 3676185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3676331-3676507:1:exon

position:3676331:1
position: 3676331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3676507:1
position: 3676507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3676603-3677421:1:exon

position:3676603:1
position: 3676603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3677421:1
position: 3677421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3677890-3678066:1:exon

position:3677890:1
position: 3677890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3678066:1
position: 3678066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3678886-3679035:1:exon

position:3678886:1
position: 3678886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3679035:1
position: 3679035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3679167-3679344:1:exon

position:3679167:1
position: 3679167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3679344:1
position: 3679344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3680006-3680073:1:exon

position:3680006:1
position: 3680006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3680073:1
position: 3680073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3680153-3680192:1:exon

position:3680153:1
position: 3680153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3680192:1
position: 3680192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3680301-3680447:1:exon

position:3680301:1
position: 3680301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3680447:1
position: 3680447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3681785-3681895:1:exon

position:3681785:1
position: 3681785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3681895:1
position: 3681895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3681984-3682076:1:exon

position:3681984:1
position: 3681984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3682076:1
position: 3682076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3682197-3682208:1:exon

position:3682197:1
position: 3682197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120251768
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 55577
gene: LOC120251768
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein At4g18490
translation: MAESSKGAPSTTGLQNKTSSLDDEFGEDFLTSWKSLKGKNSIDFDVEMIPGNGKKCFNFDKLDALELGGGLDTIPSFKMDMSDLDFSSLCKKDDKTKNPSKDSVNKEMKQDKFSFTFDFNELESFNLDSNLLKGEKNPRKCTDSGDCSSKHDGAQDSRSNSAQSLEAFENKETKKSLTAKNLATSPAEPVIKDDIMNGSGPSTSSDPGHQNMPHEVMASSEKQATIAEGSIGSYQDLHLLDGKYSAKYHADKSAQNISLQSLSGDTSENKTFPESGIGSIPLDCLITRRASKQDISIGSIDSSHSGSSSPANSYNSRGLLKPIITKSSASVGIENQQGNQDEPCGGSILGESNKRRKDKDVSEMGSVLKSPHENKHAGGKQNTSSNFLPSSLNTLISNKLLKAKSTVAPQFSTLNESAKNVSQPTSVGISKQLYSLANKKLEKKILCTLNGKSVQCHPPNMPSEISPSSNNMDKNHSSSFMPIKSPMTSSNEVRDICPKDEKRLTKLNITSANSTLQTETKSDKFYEENLQRLFGTESKVVSTVITRRSALLSPPLKRKALEELKEDTRISNQLKRFKGSTAERKKSLEVSAQSDEKLVPLTESPVGPHKEIVNGGQNLSNNFEVPILIEDDGNVEKAEACAKELDDICAMLKKKHEEAKEILVRAVVNNNTLLMLNHPMFDEKIHELQKFAASLQSKEF
SIO_010081: LOC120251768
subclass of: SO_0000673
so part of: LOC120251768
location: join(3675665..3675728,3676065..3676185,3676331..3676507,3676603..3677421,3677890..3678066,3678886..3679035,3679167..3679344,3680006..3680073,3680153..3680192,3680301..3680447,3681785..3681895,3681984..3682034)
location: region:3675665-3682034:1
so has part: feature:3675665-3675728:1:exon
so has part: feature:3676065-3676185:1:exon
so has part: feature:3676331-3676507:1:exon
so has part: feature:3676603-3677421:1:exon
so has part: feature:3677890-3678066:1:exon
so has part: feature:3678886-3679035:1:exon
so has part: feature:3679167-3679344:1:exon
so has part: feature:3680006-3680073:1:exon
so has part: feature:3680153-3680192:1:exon
so has part: feature:3680301-3680447:1:exon
so has part: feature:3681785-3681895:1:exon
so has part: feature:3681984-3682034:1:exon

XP_039116346.1
type: Protein
SIO_000068: ncbiprotein

position:3675665:1
position: 3675665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3682034:1
position: 3682034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3675665-3675728:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3676065-3676185:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3676331-3676507:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3676603-3677421:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3677890-3678066:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3678886-3679035:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3679167-3679344:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3680006-3680073:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3680153-3680192:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3680301-3680447:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3681785-3681895:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3681984-3682034:1:exon

LOC120251906
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120251906
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3834590..3836490)
location: region:3834590-3836490:-1
so has part: feature:3834590-3836490:-1:exon
subclass of: SO_0000011

120251906
type: Gene
SIO_000068: ncbigene

position:3834590:-1
position: 3834590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3836490:-1
position: 3836490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3834590-3836490:-1:exon

LOC120251906
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: lncRNA
gene: LOC120251906
product: uncharacterized LOC120251906
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XR_005533520.1
SIO_010081: LOC120251906
subclass of: SO_0000673
so part of: LOC120251906
location: complement(join(3834590..3834724,3835276..3835335,3836289..3836490))
location: region:3834590-3836490:-1
so has part: feature:3836289-3836490:-1:exon
so has part: feature:3835276-3835335:-1:exon
so has part: feature:3834590-3834724:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3836289-3836490:-1:exon

position:3836289:-1
position: 3836289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3835276-3835335:-1:exon

position:3835276:-1
position: 3835276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3835335:-1
position: 3835335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3834590-3834724:-1:exon

position:3834724:-1
position: 3834724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120252261
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252261
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(3849398..3849504)
location: region:3849398-3849504:-1
so has part: feature:3849398-3849504:-1:exon
subclass of: SO_0000578

120252261
type: Gene
SIO_000068: ncbigene

position:3849398:-1
position: 3849398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3849504:-1
position: 3849504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3849398-3849504:-1:exon

LOC120252261
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252261
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533806.1
SIO_010081: LOC120252261
subclass of: SO_0000673
so part of: LOC120252261
location: complement(3849398..3849504)
location: region:3849398-3849504:-1
so has part: feature:3849398-3849504:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3849398-3849504:-1:exon

LOC120252106
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252106
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(3909255..3909361)
location: region:3909255-3909361:-1
so has part: feature:3909255-3909361:-1:exon
subclass of: SO_0000578

120252106
type: Gene
SIO_000068: ncbigene

position:3909255:-1
position: 3909255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3909361:-1
position: 3909361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3909255-3909361:-1:exon

LOC120252106
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252106
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533654.1
SIO_010081: LOC120252106
subclass of: SO_0000673
so part of: LOC120252106
location: complement(3909255..3909361)
location: region:3909255-3909361:-1
so has part: feature:3909255-3909361:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3909255-3909361:-1:exon

LOC120252403
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252403
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 3918347..3918453
location: region:3918347-3918453:1
so has part: feature:3918347-3918453:1:exon
subclass of: SO_0000578

120252403
type: Gene
SIO_000068: ncbigene

position:3918347:1
position: 3918347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3918453:1
position: 3918453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3918347-3918453:1:exon

LOC120252403
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252403
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533935.1
SIO_010081: LOC120252403
subclass of: SO_0000673
so part of: LOC120252403
location: 3918347..3918453
location: region:3918347-3918453:1
so has part: feature:3918347-3918453:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3918347-3918453:1:exon

LOC120251897
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120251897
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3924768..3931874)
location: region:3924768-3931874:-1
so has part: feature:3924768-3931874:-1:exon
subclass of: SO_0000011

120251897
type: Gene
SIO_000068: ncbigene

position:3924768:-1
position: 3924768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3931874:-1
position: 3931874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3924768-3931874:-1:exon

LOC120251897
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: lncRNA
gene: LOC120251897
product: uncharacterized LOC120251897, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_005533517.1
SIO_010081: LOC120251897
subclass of: SO_0000673
so part of: LOC120251897
location: complement(join(3924768..3924796,3931333..3931714,3931832..3931874))
location: region:3924768-3931874:-1
so has part: feature:3931832-3931874:-1:exon
so has part: feature:3931333-3931714:-1:exon
so has part: feature:3924768-3924796:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3931832-3931874:-1:exon

position:3931832:-1
position: 3931832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3931333-3931714:-1:exon

position:3931333:-1
position: 3931333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3931714:-1
position: 3931714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3924768-3924796:-1:exon

position:3924796:-1
position: 3924796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120251897
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: lncRNA
gene: LOC120251897
product: uncharacterized LOC120251897, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XR_005533516.1
SIO_010081: LOC120251897
subclass of: SO_0000673
so part of: LOC120251897
location: complement(join(3931173..3931714,3931832..3931874))
location: region:3931173-3931874:-1
so has part: feature:3931832-3931874:-1:exon
so has part: feature:3931173-3931714:-1:exon

position:3931173:-1
position: 3931173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3931832-3931874:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3931173-3931714:-1:exon

LOC120251888
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120251888
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3987092..3988982
location: region:3987092-3988982:1
so has part: feature:3987092-3988982:1:exon
subclass of: SO_0000010

120251888
type: Gene
SIO_000068: ncbigene

position:3987092:1
position: 3987092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3988982:1
position: 3988982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3987092-3988982:1:exon

LOC120251888
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 55577
gene: LOC120251888
product: pentatricopeptide repeat-containing protein At3g51320-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 85% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_039260539.1
SIO_010081: LOC120251888
subclass of: SO_0000673
so part of: LOC120251888
location: join(3987092..3988175,3988269..3988982)
location: region:3987092-3988982:1
so has part: feature:3987092-3988175:1:exon
so has part: feature:3988269-3988982:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3987092-3988175:1:exon

position:3988175:1
position: 3988175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3988269-3988982:1:exon

position:3988269:1
position: 3988269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120251888
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 55577
gene: LOC120251888
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pentatricopeptide repeat-containing protein At3g51320-like
translation: MDSIISIPSRRQVSEPSTTSSSPELLSERPPYLYHPSLLPLRFSSSFRHLLQCQAHLTTSSLLRHPFAASRLLKLSSSLAPLAHTLLLFSHLPFPPYLCSFNILLKSLSLSPSPHLAVSFFSSMLRSGLIPDTFTFPPLAVSCARSASQTDVEVIHAQAIRRGADSVVIVCNSLIHAYAECGLVGHARVLFDEMPLRDLVSWNSLVDGYVKVRDLRSARCLFDRMPERDVVSWNIMISGCLKCRCPESGLELFREMERVGVLADVQTMVSIATACGRLGLIRYGRSVHGYFVRSFREKNNLIFETALVDMYSKCKRVDVARKVFDWIAEKNLVSWNTMILGHCMHACAQDGLALFDEMVQIGEEDSELKPDETTFVGILLGCSRAGLLDEGRRYFDEMTSIHSLKPTFAHYWCMANLHWSLGMVQEAEEVLMGMPEDTESQVWSTLFGSCRFRGDIELGEQIGKRLIELEPYNSSRYALLWNIYSVAERWEDVEKVKEMLKQRAVKTIPGHSLFDLKEIVHSFKAGDRSQPEMKDIYSMMDEIAARLKFRAQAHGHKLPV
SIO_010081: LOC120251888
subclass of: SO_0000673
so part of: LOC120251888
location: join(3987092..3988175,3988269..3988867)
location: region:3987092-3988867:1
so has part: feature:3987092-3988175:1:exon
so has part: feature:3988269-3988867:1:exon

XP_039116473.1
type: Protein
SIO_000068: ncbiprotein

position:3988867:1
position: 3988867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3987092-3988175:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3988269-3988867:1:exon

LOC120252388
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252388
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 3993429..3993535
location: region:3993429-3993535:1
so has part: feature:3993429-3993535:1:exon
subclass of: SO_0000578

120252388
type: Gene
SIO_000068: ncbigene

position:3993429:1
position: 3993429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3993535:1
position: 3993535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3993429-3993535:1:exon

LOC120252388
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252388
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533921.1
SIO_010081: LOC120252388
subclass of: SO_0000673
so part of: LOC120252388
location: 3993429..3993535
location: region:3993429-3993535:1
so has part: feature:3993429-3993535:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3993429-3993535:1:exon

LOC120251889
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120251889
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4041774..4042781)
location: region:4041774-4042781:-1
so has part: feature:4041774-4042781:-1:exon
subclass of: SO_0000010

120251889
type: Gene
SIO_000068: ncbigene

position:4041774:-1
position: 4041774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4042781:-1
position: 4042781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4041774-4042781:-1:exon

LOC120251889
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 55577
gene: LOC120251889
product: pentatricopeptide repeat-containing protein At5g62370-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_039260540.1
SIO_010081: LOC120251889
subclass of: SO_0000673
so part of: LOC120251889
location: complement(join(4041774..4042204,4042307..4042781))
location: region:4041774-4042781:-1
so has part: feature:4042307-4042781:-1:exon
so has part: feature:4041774-4042204:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4042307-4042781:-1:exon

position:4042307:-1
position: 4042307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4041774-4042204:-1:exon

position:4042204:-1
position: 4042204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120251889
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 55577
gene: LOC120251889
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pentatricopeptide repeat-containing protein At5g62370-like
translation: MIQYGFRPPVNVYTSIIRSLCKAERMVEAELTFDRMLQARVMPHKWIYTALINGYLKMRKIVDARYLFDEMVYRDIKPCSHSYGALINGLVKTNMFRMASKFVHMMPEDGFVPNTVLYNMLINHFLKKGDVRFGLDLFALMVRNRVEPNLITFGVVISGKLTQNIRCGTTKEKIELAREYMLLLLDVVLVPNLHIYNGMINVFCQANMRNNVNALIDSMDKVGVVVNQVTCNILMDAYINSGEIDRAIELFNQMNMIGCMANNVNLDTLLKGYSTAQRGIYRSRTPKISQITSTGWQYLLY
SIO_010081: LOC120251889
subclass of: SO_0000673
so part of: LOC120251889
location: complement(join(4041774..4042204,4042307..4042781))
location: region:4041774-4042781:-1
so has part: feature:4042307-4042781:-1:exon
so has part: feature:4041774-4042204:-1:exon

XP_039116474.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4042307-4042781:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4041774-4042204:-1:exon

LOC120251890
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120251890
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 4053590..4076050
location: region:4053590-4076050:1
so has part: feature:4053590-4076050:1:exon

120251890
type: Gene
SIO_000068: ncbigene

position:4053590:1
position: 4053590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4076050:1
position: 4076050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4053590-4076050:1:exon

LOC120251890
type: Exon
subclass of: SO_0000147
RO_0002162: 55577
gene: LOC120251890
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 13% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC120251890
subclass of: SO_0000673
so part of: LOC120251890
location: 4053590..4053716
location: region:4053590-4053716:1
so has part: feature:4053590-4053716:1:exon

position:4053716:1
position: 4053716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4053590-4053716:1:exon

LOC120251890
type: Exon
subclass of: SO_0000147
RO_0002162: 55577
gene: LOC120251890
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 13% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC120251890
subclass of: SO_0000673
so part of: LOC120251890
location: 4060242..4060337
location: region:4060242-4060337:1
so has part: feature:4060242-4060337:1:exon

position:4060242:1
position: 4060242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4060337:1
position: 4060337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4060242-4060337:1:exon

LOC120251890
type: Exon
subclass of: SO_0000147
RO_0002162: 55577
gene: LOC120251890
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 13% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC120251890
subclass of: SO_0000673
so part of: LOC120251890
location: 4060693..4060787
location: region:4060693-4060787:1
so has part: feature:4060693-4060787:1:exon

position:4060693:1
position: 4060693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4060787:1
position: 4060787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4060693-4060787:1:exon

LOC120251890
type: Exon
subclass of: SO_0000147
RO_0002162: 55577
gene: LOC120251890
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 13% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC120251890
subclass of: SO_0000673
so part of: LOC120251890
location: 4067171..4067332
location: region:4067171-4067332:1
so has part: feature:4067171-4067332:1:exon

position:4067171:1
position: 4067171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4067332:1
position: 4067332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4067171-4067332:1:exon

LOC120251890
type: Exon
subclass of: SO_0000147
RO_0002162: 55577
gene: LOC120251890
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 13% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC120251890
subclass of: SO_0000673
so part of: LOC120251890
location: 4068380..4068460
location: region:4068380-4068460:1
so has part: feature:4068380-4068460:1:exon

position:4068380:1
position: 4068380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4068460:1
position: 4068460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4068380-4068460:1:exon

LOC120251890
type: Exon
subclass of: SO_0000147
RO_0002162: 55577
gene: LOC120251890
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 13% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC120251890
subclass of: SO_0000673
so part of: LOC120251890
location: 4068638..4068859
location: region:4068638-4068859:1
so has part: feature:4068638-4068859:1:exon

position:4068638:1
position: 4068638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4068859:1
position: 4068859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4068638-4068859:1:exon

LOC120251890
type: Exon
subclass of: SO_0000147
RO_0002162: 55577
gene: LOC120251890
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 13% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC120251890
subclass of: SO_0000673
so part of: LOC120251890
location: 4069682..4069833
location: region:4069682-4069833:1
so has part: feature:4069682-4069833:1:exon

position:4069682:1
position: 4069682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4069833:1
position: 4069833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4069682-4069833:1:exon

LOC120251890
type: Exon
subclass of: SO_0000147
RO_0002162: 55577
gene: LOC120251890
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 13% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC120251890
subclass of: SO_0000673
so part of: LOC120251890
location: 4074684..4074703
location: region:4074684-4074703:1
so has part: feature:4074684-4074703:1:exon

position:4074684:1
position: 4074684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4074703:1
position: 4074703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4074684-4074703:1:exon

LOC120251890
type: Exon
subclass of: SO_0000147
RO_0002162: 55577
gene: LOC120251890
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 13% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC120251890
subclass of: SO_0000673
so part of: LOC120251890
location: 4074940..4074977
location: region:4074940-4074977:1
so has part: feature:4074940-4074977:1:exon

position:4074940:1
position: 4074940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4074977:1
position: 4074977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4074940-4074977:1:exon

LOC120251890
type: Exon
subclass of: SO_0000147
RO_0002162: 55577
gene: LOC120251890
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 13% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC120251890
subclass of: SO_0000673
so part of: LOC120251890
location: 4075092..4075193
location: region:4075092-4075193:1
so has part: feature:4075092-4075193:1:exon

position:4075092:1
position: 4075092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4075193:1
position: 4075193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4075092-4075193:1:exon

LOC120251890
type: Exon
subclass of: SO_0000147
RO_0002162: 55577
gene: LOC120251890
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 13% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC120251890
subclass of: SO_0000673
so part of: LOC120251890
location: 4075850..4075891
location: region:4075850-4075891:1
so has part: feature:4075850-4075891:1:exon

position:4075850:1
position: 4075850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4075891:1
position: 4075891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4075850-4075891:1:exon

LOC120251890
type: Exon
subclass of: SO_0000147
RO_0002162: 55577
gene: LOC120251890
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 13% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC120251890
subclass of: SO_0000673
so part of: LOC120251890
location: 4076006..4076050
location: region:4076006-4076050:1
so has part: feature:4076006-4076050:1:exon

position:4076006:1
position: 4076006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4076006-4076050:1:exon

LOC120252420
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252420
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 4084281..4084387
location: region:4084281-4084387:1
so has part: feature:4084281-4084387:1:exon
subclass of: SO_0000578

120252420
type: Gene
SIO_000068: ncbigene

position:4084281:1
position: 4084281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4084387:1
position: 4084387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4084281-4084387:1:exon

LOC120252420
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252420
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533950.1
SIO_010081: LOC120252420
subclass of: SO_0000673
so part of: LOC120252420
location: 4084281..4084387
location: region:4084281-4084387:1
so has part: feature:4084281-4084387:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4084281-4084387:1:exon

LOC120252158
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252158
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(4101105..4101211)
location: region:4101105-4101211:-1
so has part: feature:4101105-4101211:-1:exon
subclass of: SO_0000578

120252158
type: Gene
SIO_000068: ncbigene

position:4101105:-1
position: 4101105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4101211:-1
position: 4101211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4101105-4101211:-1:exon

LOC120252158
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252158
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533703.1
SIO_010081: LOC120252158
subclass of: SO_0000673
so part of: LOC120252158
location: complement(4101105..4101211)
location: region:4101105-4101211:-1
so has part: feature:4101105-4101211:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4101105-4101211:-1:exon

LOC120251891
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120251891
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4178857..4180522
location: region:4178857-4180522:1
so has part: feature:4178857-4180522:1:exon
subclass of: SO_0000010

120251891
type: Gene
SIO_000068: ncbigene

position:4178857:1
position: 4178857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4180522:1
position: 4180522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4178857-4180522:1:exon

LOC120251891
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 55577
gene: LOC120251891
product: uncharacterized LOC120251891
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_039260541.1
SIO_010081: LOC120251891
subclass of: SO_0000673
so part of: LOC120251891
location: join(4178857..4179192,4179236..4179635,4179712..4179935,4180043..4180522)
location: region:4178857-4180522:1
so has part: feature:4178857-4179192:1:exon
so has part: feature:4179236-4179635:1:exon
so has part: feature:4179712-4179935:1:exon
so has part: feature:4180043-4180522:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4178857-4179192:1:exon

position:4179192:1
position: 4179192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4179236-4179635:1:exon

position:4179236:1
position: 4179236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4179635:1
position: 4179635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4179712-4179935:1:exon

position:4179712:1
position: 4179712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4179935:1
position: 4179935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4180043-4180522:1:exon

position:4180043:1
position: 4180043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120251891
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 55577
gene: LOC120251891
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC120251891
translation: MAEPRRTLSDYERPQFTGEEFSVHAPTVPANNFEIKASTIGMIQNSVQFDGLADEDPHAHLSRFLQICSTFKINSVSDDAIRLRLFPFSLRGAAYRWLTSLAPGSITTWKEMTRLRQEISAFPARDSETLFEAHKRFKDLLRKCPHHGFSSWMRIQMLCNGLNYATRQLIDAAAGGSLSNKTPEDAEMLIENMASNECHWSTRQKPPKAAGIYEIDDNTALAAKVEALTKRFDPVYVGFKLKFWSIETVDYVGGGPRGPGNPYGNTYNRGGGITQKFSPGSTTQPRPQADLEGLSHQLPQQPEKKFSTEDVLARFMISTESKFERPPGSLPSNTENNPREHLKAVTLRSGKQVEARAKEGSSTEHDGVAVREDPMSSESLVDGGKEKQDEEILQLPTPRVPEYKPTIPYPARLKQDKEEAQFKKFLNVFKQLHINIPLVEALTQMPKYAKFMKDLLTNKRKLEELESVALPRNCSAMIL
SIO_010081: LOC120251891
subclass of: SO_0000673
so part of: LOC120251891
location: join(4178857..4179192,4179236..4179635,4179712..4179935,4180043..4180522)
location: region:4178857-4180522:1
so has part: feature:4178857-4179192:1:exon
so has part: feature:4179236-4179635:1:exon
so has part: feature:4179712-4179935:1:exon
so has part: feature:4180043-4180522:1:exon

XP_039116475.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4178857-4179192:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4179236-4179635:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4179712-4179935:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4180043-4180522:1:exon

LOC120251892
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120251892
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4203420..4205467)
location: region:4203420-4205467:-1
so has part: feature:4203420-4205467:-1:exon
subclass of: SO_0000010

120251892
type: Gene
SIO_000068: ncbigene

position:4203420:-1
position: 4203420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4205467:-1
position: 4205467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4203420-4205467:-1:exon

LOC120251892
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 55577
gene: LOC120251892
product: zinc finger BED domain-containing protein RICESLEEPER 3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 66% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_039260542.1
SIO_010081: LOC120251892
subclass of: SO_0000673
so part of: LOC120251892
location: complement(join(4203420..4203432,4203537..4203933,4204325..4205218,4205352..4205467))
location: region:4203420-4205467:-1
so has part: feature:4205352-4205467:-1:exon
so has part: feature:4204325-4205218:-1:exon
so has part: feature:4203537-4203933:-1:exon
so has part: feature:4203420-4203432:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4205352-4205467:-1:exon

position:4205352:-1
position: 4205352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4204325-4205218:-1:exon

position:4204325:-1
position: 4204325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4205218:-1
position: 4205218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4203537-4203933:-1:exon

position:4203537:-1
position: 4203537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4203933:-1
position: 4203933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4203420-4203432:-1:exon

position:4203432:-1
position: 4203432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120251892
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 55577
gene: LOC120251892
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger BED domain-containing protein RICESLEEPER 3-like
translation: MESQSSTPINLGDENVEPESKRGRSDVWEHFDKLPPIDANSQRAQCKYCKKAYSCKSTGGTSHLRRHLTKCPKRVCRDIRQYTISHQTTTSGTSFSNYKIDVEIIRREIAMMIAIDEQPFIMVENIGFRRVIAAACPEFKMMSRKTIKRDIMLLYKRERQNLKDILIECPSRICLTSDTWKSITEDHYICVTAHFIDHEWLLHKRLIHFKLIPPPYDSFSIEDEINTCVAQWNIQHKLFSITLDNLSTNDCVVSLLKSRLNQRGFLPCDGEFFHIRCCAHILNLVVQSAFNLIMLTIESFLTPMVKEMQRKFDKYWSEYSLILSCAVILDPRYKVKFVEFCYTKVYGMESREYTSNVVATLYKCFEAYKKDRASSSQYTMSSKSNLTINDDDYDEMQELDAFEGHVSRVQMQKSELDLYLEEPCLDRNVEEHI
SIO_010081: LOC120251892
subclass of: SO_0000673
so part of: LOC120251892
location: complement(join(4203420..4203432,4203537..4203933,4204325..4205216))
location: region:4203420-4205216:-1
so has part: feature:4204325-4205216:-1:exon
so has part: feature:4203537-4203933:-1:exon
so has part: feature:4203420-4203432:-1:exon

XP_039116476.1
type: Protein
SIO_000068: ncbiprotein

position:4205216:-1
position: 4205216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4204325-4205216:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4203537-4203933:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4203420-4203432:-1:exon

LOC120252098
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252098
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(4372906..4373012)
location: region:4372906-4373012:-1
so has part: feature:4372906-4373012:-1:exon
subclass of: SO_0000578

120252098
type: Gene
SIO_000068: ncbigene

position:4372906:-1
position: 4372906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4373012:-1
position: 4373012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4372906-4373012:-1:exon

LOC120252098
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252098
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533647.1
SIO_010081: LOC120252098
subclass of: SO_0000673
so part of: LOC120252098
location: complement(4372906..4373012)
location: region:4372906-4373012:-1
so has part: feature:4372906-4373012:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4372906-4373012:-1:exon

LOC120252379
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252379
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 4441319..4441424
location: region:4441319-4441424:1
so has part: feature:4441319-4441424:1:exon
subclass of: SO_0000578

120252379
type: Gene
SIO_000068: ncbigene

position:4441319:1
position: 4441319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4441424:1
position: 4441424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4441319-4441424:1:exon

LOC120252379
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252379
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533913.1
SIO_010081: LOC120252379
subclass of: SO_0000673
so part of: LOC120252379
location: 4441319..4441424
location: region:4441319-4441424:1
so has part: feature:4441319-4441424:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4441319-4441424:1:exon

LOC120252116
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252116
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 4456540..4456646
location: region:4456540-4456646:1
so has part: feature:4456540-4456646:1:exon
subclass of: SO_0000578

120252116
type: Gene
SIO_000068: ncbigene

position:4456540:1
position: 4456540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4456646:1
position: 4456646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4456540-4456646:1:exon

LOC120252116
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252116
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533664.1
SIO_010081: LOC120252116
subclass of: SO_0000673
so part of: LOC120252116
location: 4456540..4456646
location: region:4456540-4456646:1
so has part: feature:4456540-4456646:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4456540-4456646:1:exon

LOC120252446
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252446
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(4531815..4531923)
location: region:4531815-4531923:-1
so has part: feature:4531815-4531923:-1:exon
subclass of: SO_0000578

120252446
type: Gene
SIO_000068: ncbigene

position:4531815:-1
position: 4531815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4531923:-1
position: 4531923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4531815-4531923:-1:exon

LOC120252446
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252446
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533977.1
SIO_010081: LOC120252446
subclass of: SO_0000673
so part of: LOC120252446
location: complement(4531815..4531923)
location: region:4531815-4531923:-1
so has part: feature:4531815-4531923:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4531815-4531923:-1:exon

LOC120252066
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252066
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(4547933..4548039)
location: region:4547933-4548039:-1
so has part: feature:4547933-4548039:-1:exon
subclass of: SO_0000578

120252066
type: Gene
SIO_000068: ncbigene

position:4547933:-1
position: 4547933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4548039:-1
position: 4548039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4547933-4548039:-1:exon

LOC120252066
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252066
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533617.1
SIO_010081: LOC120252066
subclass of: SO_0000673
so part of: LOC120252066
location: complement(4547933..4548039)
location: region:4547933-4548039:-1
so has part: feature:4547933-4548039:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4547933-4548039:-1:exon

LOC120252136
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252136
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 4620039..4620145
location: region:4620039-4620145:1
so has part: feature:4620039-4620145:1:exon
subclass of: SO_0000578

120252136
type: Gene
SIO_000068: ncbigene

position:4620039:1
position: 4620039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4620145:1
position: 4620145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4620039-4620145:1:exon

LOC120252136
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252136
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533682.1
SIO_010081: LOC120252136
subclass of: SO_0000673
so part of: LOC120252136
location: 4620039..4620145
location: region:4620039-4620145:1
so has part: feature:4620039-4620145:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4620039-4620145:1:exon

LOC120252340
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252340
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(4672240..4672346)
location: region:4672240-4672346:-1
so has part: feature:4672240-4672346:-1:exon
subclass of: SO_0000578

120252340
type: Gene
SIO_000068: ncbigene

position:4672240:-1
position: 4672240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4672346:-1
position: 4672346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4672240-4672346:-1:exon

LOC120252340
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252340
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533879.1
SIO_010081: LOC120252340
subclass of: SO_0000673
so part of: LOC120252340
location: complement(4672240..4672346)
location: region:4672240-4672346:-1
so has part: feature:4672240-4672346:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4672240-4672346:-1:exon

LOC120252088
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252088
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 4683819..4683925
location: region:4683819-4683925:1
so has part: feature:4683819-4683925:1:exon
subclass of: SO_0000578

120252088
type: Gene
SIO_000068: ncbigene

position:4683819:1
position: 4683819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4683925:1
position: 4683925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4683819-4683925:1:exon

LOC120252088
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252088
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533637.1
SIO_010081: LOC120252088
subclass of: SO_0000673
so part of: LOC120252088
location: 4683819..4683925
location: region:4683819-4683925:1
so has part: feature:4683819-4683925:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4683819-4683925:1:exon

LOC120252091
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252091
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(4700543..4700649)
location: region:4700543-4700649:-1
so has part: feature:4700543-4700649:-1:exon
subclass of: SO_0000578

120252091
type: Gene
SIO_000068: ncbigene

position:4700543:-1
position: 4700543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4700649:-1
position: 4700649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4700543-4700649:-1:exon

LOC120252091
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252091
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533640.1
SIO_010081: LOC120252091
subclass of: SO_0000673
so part of: LOC120252091
location: complement(4700543..4700649)
location: region:4700543-4700649:-1
so has part: feature:4700543-4700649:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4700543-4700649:-1:exon

LOC120252360
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252360
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 4709748..4709854
location: region:4709748-4709854:1
so has part: feature:4709748-4709854:1:exon
subclass of: SO_0000578

120252360
type: Gene
SIO_000068: ncbigene

position:4709748:1
position: 4709748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4709854:1
position: 4709854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4709748-4709854:1:exon

LOC120252360
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252360
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533896.1
SIO_010081: LOC120252360
subclass of: SO_0000673
so part of: LOC120252360
location: 4709748..4709854
location: region:4709748-4709854:1
so has part: feature:4709748-4709854:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4709748-4709854:1:exon

LOC120252377
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252377
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(4770593..4770693)
location: region:4770593-4770693:-1
so has part: feature:4770593-4770693:-1:exon

120252377
type: Gene
SIO_000068: ncbigene

position:4770593:-1
position: 4770593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4770693:-1
position: 4770693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4770593-4770693:-1:exon

LOC120252377
type: Exon
subclass of: SO_0000147
RO_0002162: 55577
gene: LOC120252377
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC120252377
subclass of: SO_0000673
so part of: LOC120252377
location: complement(4770593..4770693)
location: region:4770593-4770693:-1
so has part: feature:4770593-4770693:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4770593-4770693:-1:exon

LOC120252192
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252192
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(4787718..4787821)
location: region:4787718-4787821:-1
so has part: feature:4787718-4787821:-1:exon
subclass of: SO_0000578

120252192
type: Gene
SIO_000068: ncbigene

position:4787718:-1
position: 4787718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4787821:-1
position: 4787821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4787718-4787821:-1:exon

LOC120252192
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252192
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533734.1
SIO_010081: LOC120252192
subclass of: SO_0000673
so part of: LOC120252192
location: complement(4787718..4787821)
location: region:4787718-4787821:-1
so has part: feature:4787718-4787821:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4787718-4787821:-1:exon

LOC120251791
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120251791
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4870612..4871358
location: region:4870612-4871358:1
so has part: feature:4870612-4871358:1:exon
subclass of: SO_0000010

120251791
type: Gene
SIO_000068: ncbigene

position:4870612:1
position: 4870612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4871358:1
position: 4871358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4870612-4871358:1:exon

LOC120251791
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 55577
gene: LOC120251791
product: uncharacterized LOC120251791
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_039260440.1
SIO_010081: LOC120251791
subclass of: SO_0000673
so part of: LOC120251791
location: 4870612..4871358
location: region:4870612-4871358:1
so has part: feature:4870612-4871358:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4870612-4871358:1:exon

LOC120251791
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 55577
gene: LOC120251791
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC120251791
translation: MELEAFPAKFCKGVRSYWRRRKYIKLESSGSKTAGVRVVRLGDGTHHQSTHRRFWRLKRVIKLKIKAWSPFRLMAKLRDAYIDAMLRLAGKGSGLTISAGPEPLWDRRIPRSRTVKPARTEFEQRLIFEIYRSLVVSGEIAPKPELTD
SIO_010081: LOC120251791
subclass of: SO_0000673
so part of: LOC120251791
location: 4870687..4871133
location: region:4870687-4871133:1
so has part: feature:4870687-4871133:1:exon

XP_039116374.1
type: Protein
SIO_000068: ncbiprotein

position:4870687:1
position: 4870687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4871133:1
position: 4871133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4870687-4871133:1:exon

LOC120252048
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252048
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(4944724..4944830)
location: region:4944724-4944830:-1
so has part: feature:4944724-4944830:-1:exon
subclass of: SO_0000578

120252048
type: Gene
SIO_000068: ncbigene

position:4944724:-1
position: 4944724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4944830:-1
position: 4944830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4944724-4944830:-1:exon

LOC120252048
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252048
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533600.1
SIO_010081: LOC120252048
subclass of: SO_0000673
so part of: LOC120252048
location: complement(4944724..4944830)
location: region:4944724-4944830:-1
so has part: feature:4944724-4944830:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4944724-4944830:-1:exon

LOC120252393
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252393
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(4976042..4976147)
location: region:4976042-4976147:-1
so has part: feature:4976042-4976147:-1:exon
subclass of: SO_0000578

120252393
type: Gene
SIO_000068: ncbigene

position:4976042:-1
position: 4976042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4976147:-1
position: 4976147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4976042-4976147:-1:exon

LOC120252393
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252393
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533926.1
SIO_010081: LOC120252393
subclass of: SO_0000673
so part of: LOC120252393
location: complement(4976042..4976147)
location: region:4976042-4976147:-1
so has part: feature:4976042-4976147:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4976042-4976147:-1:exon

LOC120251978
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120251978
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 5062667..5062773
location: region:5062667-5062773:1
so has part: feature:5062667-5062773:1:exon
subclass of: SO_0000578

120251978
type: Gene
SIO_000068: ncbigene

position:5062667:1
position: 5062667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5062773:1
position: 5062773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5062667-5062773:1:exon

LOC120251978
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120251978
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533537.1
SIO_010081: LOC120251978
subclass of: SO_0000673
so part of: LOC120251978
location: 5062667..5062773
location: region:5062667-5062773:1
so has part: feature:5062667-5062773:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5062667-5062773:1:exon

LOC120252365
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252365
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(5122081..5122187)
location: region:5122081-5122187:-1
so has part: feature:5122081-5122187:-1:exon
subclass of: SO_0000578

120252365
type: Gene
SIO_000068: ncbigene

position:5122081:-1
position: 5122081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5122187:-1
position: 5122187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5122081-5122187:-1:exon

LOC120252365
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252365
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533900.1
SIO_010081: LOC120252365
subclass of: SO_0000673
so part of: LOC120252365
location: complement(5122081..5122187)
location: region:5122081-5122187:-1
so has part: feature:5122081-5122187:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5122081-5122187:-1:exon

LOC120252404
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252404
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(5163145..5163251)
location: region:5163145-5163251:-1
so has part: feature:5163145-5163251:-1:exon
subclass of: SO_0000578

120252404
type: Gene
SIO_000068: ncbigene

position:5163145:-1
position: 5163145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5163251:-1
position: 5163251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5163145-5163251:-1:exon

LOC120252404
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252404
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533936.1
SIO_010081: LOC120252404
subclass of: SO_0000673
so part of: LOC120252404
location: complement(5163145..5163251)
location: region:5163145-5163251:-1
so has part: feature:5163145-5163251:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5163145-5163251:-1:exon

LOC120252438
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252438
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 5174934..5175040
location: region:5174934-5175040:1
so has part: feature:5174934-5175040:1:exon
subclass of: SO_0000578

120252438
type: Gene
SIO_000068: ncbigene

position:5174934:1
position: 5174934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5175040:1
position: 5175040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5174934-5175040:1:exon

LOC120252438
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252438
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533968.1
SIO_010081: LOC120252438
subclass of: SO_0000673
so part of: LOC120252438
location: 5174934..5175040
location: region:5174934-5175040:1
so has part: feature:5174934-5175040:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5174934-5175040:1:exon

LOC120252125
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252125
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(5193966..5194072)
location: region:5193966-5194072:-1
so has part: feature:5193966-5194072:-1:exon
subclass of: SO_0000578

120252125
type: Gene
SIO_000068: ncbigene

position:5193966:-1
position: 5193966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5194072:-1
position: 5194072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5193966-5194072:-1:exon

LOC120252125
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252125
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533672.1
SIO_010081: LOC120252125
subclass of: SO_0000673
so part of: LOC120252125
location: complement(5193966..5194072)
location: region:5193966-5194072:-1
so has part: feature:5193966-5194072:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5193966-5194072:-1:exon

LOC120252299
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252299
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 5277305..5277411
location: region:5277305-5277411:1
so has part: feature:5277305-5277411:1:exon
subclass of: SO_0000578

120252299
type: Gene
SIO_000068: ncbigene

position:5277305:1
position: 5277305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5277411:1
position: 5277411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5277305-5277411:1:exon

LOC120252299
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252299
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533840.1
SIO_010081: LOC120252299
subclass of: SO_0000673
so part of: LOC120252299
location: 5277305..5277411
location: region:5277305-5277411:1
so has part: feature:5277305-5277411:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5277305-5277411:1:exon

LOC120251123
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120251123
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5372474..5384507
location: region:5372474-5384507:1
so has part: feature:5372474-5384507:1:exon
subclass of: SO_0000011

120251123
type: Gene
SIO_000068: ncbigene

position:5372474:1
position: 5372474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5384507:1
position: 5384507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5372474-5384507:1:exon

LOC120251123
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: lncRNA
gene: LOC120251123
product: uncharacterized LOC120251123, transcript variant X14
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XR_005533371.1
SIO_010081: LOC120251123
subclass of: SO_0000673
so part of: LOC120251123
location: join(5372474..5372576,5375565..5375621,5375693..5375921,5376574..5376646,5376945..5377156,5377248..5377340,5377460..5377524,5377637..5378920)
location: region:5372474-5378920:1
so has part: feature:5372474-5372576:1:exon
so has part: feature:5375565-5375621:1:exon
so has part: feature:5375693-5375921:1:exon
so has part: feature:5376574-5376646:1:exon
so has part: feature:5376945-5377156:1:exon
so has part: feature:5377248-5377340:1:exon
so has part: feature:5377460-5377524:1:exon
so has part: feature:5377637-5378920:1:exon

position:5378920:1
position: 5378920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5372474-5372576:1:exon

position:5372576:1
position: 5372576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5375565-5375621:1:exon

position:5375565:1
position: 5375565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5375621:1
position: 5375621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5375693-5375921:1:exon

position:5375693:1
position: 5375693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5375921:1
position: 5375921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5376574-5376646:1:exon

position:5376574:1
position: 5376574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5376646:1
position: 5376646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5376945-5377156:1:exon

position:5376945:1
position: 5376945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5377156:1
position: 5377156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5377248-5377340:1:exon

position:5377248:1
position: 5377248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5377340:1
position: 5377340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5377460-5377524:1:exon

position:5377460:1
position: 5377460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5377524:1
position: 5377524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5377637-5378920:1:exon

position:5377637:1
position: 5377637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120251123
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: lncRNA
gene: LOC120251123
product: uncharacterized LOC120251123, transcript variant X21
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XR_005533378.1
SIO_010081: LOC120251123
subclass of: SO_0000673
so part of: LOC120251123
location: join(5372474..5372576,5375565..5375621,5375697..5375921,5376574..5376646,5376945..5377156,5377248..5377340,5377460..5377524,5377637..5378920)
location: region:5372474-5378920:1
so has part: feature:5372474-5372576:1:exon
so has part: feature:5375565-5375621:1:exon
so has part: feature:5375697-5375921:1:exon
so has part: feature:5376574-5376646:1:exon
so has part: feature:5376945-5377156:1:exon
so has part: feature:5377248-5377340:1:exon
so has part: feature:5377460-5377524:1:exon
so has part: feature:5377637-5378920:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5372474-5372576:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5375565-5375621:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5375697-5375921:1:exon

position:5375697:1
position: 5375697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5376574-5376646:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5376945-5377156:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5377248-5377340:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5377460-5377524:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5377637-5378920:1:exon

LOC120251123
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: lncRNA
gene: LOC120251123
product: uncharacterized LOC120251123, transcript variant X16
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005533373.1
SIO_010081: LOC120251123
subclass of: SO_0000673
so part of: LOC120251123
location: join(5372483..5372576,5373133..5373530,5375565..5375621,5375693..5375921,5376574..5376646,5376945..5377156,5377248..5377340,5377460..5377524,5377637..5378188,5384207..5384507)
location: region:5372483-5384507:1
so has part: feature:5372483-5372576:1:exon
so has part: feature:5373133-5373530:1:exon
so has part: feature:5375565-5375621:1:exon
so has part: feature:5375693-5375921:1:exon
so has part: feature:5376574-5376646:1:exon
so has part: feature:5376945-5377156:1:exon
so has part: feature:5377248-5377340:1:exon
so has part: feature:5377460-5377524:1:exon
so has part: feature:5377637-5378188:1:exon
so has part: feature:5384207-5384507:1:exon

position:5372483:1
position: 5372483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5372483-5372576:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5373133-5373530:1:exon

position:5373133:1
position: 5373133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5373530:1
position: 5373530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5375565-5375621:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5375693-5375921:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5376574-5376646:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5376945-5377156:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5377248-5377340:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5377460-5377524:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5377637-5378188:1:exon

position:5378188:1
position: 5378188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5384207-5384507:1:exon

position:5384207:1
position: 5384207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120251123
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: lncRNA
gene: LOC120251123
product: uncharacterized LOC120251123, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005533359.1
SIO_010081: LOC120251123
subclass of: SO_0000673
so part of: LOC120251123
location: join(5372483..5372576,5373133..5373530,5375565..5375621,5375693..5375946,5376424..5376484,5376574..5376646,5376945..5377156,5377248..5377340,5377460..5377524,5377637..5378920)
location: region:5372483-5378920:1
so has part: feature:5372483-5372576:1:exon
so has part: feature:5373133-5373530:1:exon
so has part: feature:5375565-5375621:1:exon
so has part: feature:5375693-5375946:1:exon
so has part: feature:5376424-5376484:1:exon
so has part: feature:5376574-5376646:1:exon
so has part: feature:5376945-5377156:1:exon
so has part: feature:5377248-5377340:1:exon
so has part: feature:5377460-5377524:1:exon
so has part: feature:5377637-5378920:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5372483-5372576:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5373133-5373530:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5375565-5375621:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5375693-5375946:1:exon

position:5375946:1
position: 5375946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5376424-5376484:1:exon

position:5376424:1
position: 5376424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5376484:1
position: 5376484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5376574-5376646:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5376945-5377156:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5377248-5377340:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5377460-5377524:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5377637-5378920:1:exon

LOC120251123
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: lncRNA
gene: LOC120251123
product: uncharacterized LOC120251123, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005533361.1
SIO_010081: LOC120251123
subclass of: SO_0000673
so part of: LOC120251123
location: join(5372483..5372576,5373133..5373530,5375565..5375621,5375693..5375946,5376424..5376484,5376578..5376646,5376945..5377156,5377248..5377340,5377460..5377524,5377637..5378920)
location: region:5372483-5378920:1
so has part: feature:5372483-5372576:1:exon
so has part: feature:5373133-5373530:1:exon
so has part: feature:5375565-5375621:1:exon
so has part: feature:5375693-5375946:1:exon
so has part: feature:5376424-5376484:1:exon
so has part: feature:5376578-5376646:1:exon
so has part: feature:5376945-5377156:1:exon
so has part: feature:5377248-5377340:1:exon
so has part: feature:5377460-5377524:1:exon
so has part: feature:5377637-5378920:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5372483-5372576:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5373133-5373530:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5375565-5375621:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5375693-5375946:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5376424-5376484:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5376578-5376646:1:exon

position:5376578:1
position: 5376578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5376945-5377156:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5377248-5377340:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5377460-5377524:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5377637-5378920:1:exon

LOC120251123
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: lncRNA
gene: LOC120251123
product: uncharacterized LOC120251123, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_005533360.1
SIO_010081: LOC120251123
subclass of: SO_0000673
so part of: LOC120251123
location: join(5372483..5372576,5373133..5373530,5375565..5375621,5375693..5375946,5376574..5376646,5376945..5377156,5377248..5377340,5377460..5377524,5377637..5378920)
location: region:5372483-5378920:1
so has part: feature:5372483-5372576:1:exon
so has part: feature:5373133-5373530:1:exon
so has part: feature:5375565-5375621:1:exon
so has part: feature:5375693-5375946:1:exon
so has part: feature:5376574-5376646:1:exon
so has part: feature:5376945-5377156:1:exon
so has part: feature:5377248-5377340:1:exon
so has part: feature:5377460-5377524:1:exon
so has part: feature:5377637-5378920:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5372483-5372576:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5373133-5373530:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5375565-5375621:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5375693-5375946:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5376574-5376646:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5376945-5377156:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5377248-5377340:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5377460-5377524:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5377637-5378920:1:exon

LOC120251123
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: lncRNA
gene: LOC120251123
product: uncharacterized LOC120251123, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XR_005533362.1
SIO_010081: LOC120251123
subclass of: SO_0000673
so part of: LOC120251123
location: join(5372483..5372576,5373133..5373530,5375565..5375621,5375693..5375921,5376424..5376484,5376574..5376646,5376945..5377156,5377248..5377340,5377460..5377524,5377637..5378920)
location: region:5372483-5378920:1
so has part: feature:5372483-5372576:1:exon
so has part: feature:5373133-5373530:1:exon
so has part: feature:5375565-5375621:1:exon
so has part: feature:5375693-5375921:1:exon
so has part: feature:5376424-5376484:1:exon
so has part: feature:5376574-5376646:1:exon
so has part: feature:5376945-5377156:1:exon
so has part: feature:5377248-5377340:1:exon
so has part: feature:5377460-5377524:1:exon
so has part: feature:5377637-5378920:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5372483-5372576:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5373133-5373530:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5375565-5375621:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5375693-5375921:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5376424-5376484:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5376574-5376646:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5376945-5377156:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5377248-5377340:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5377460-5377524:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5377637-5378920:1:exon

LOC120251123
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: lncRNA
gene: LOC120251123
product: uncharacterized LOC120251123, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XR_005533364.1
SIO_010081: LOC120251123
subclass of: SO_0000673
so part of: LOC120251123
location: join(5372483..5372576,5373133..5373530,5375565..5375621,5375693..5375921,5376424..5376484,5376578..5376646,5376945..5377156,5377248..5377340,5377460..5377524,5377637..5378920)
location: region:5372483-5378920:1
so has part: feature:5372483-5372576:1:exon
so has part: feature:5373133-5373530:1:exon
so has part: feature:5375565-5375621:1:exon
so has part: feature:5375693-5375921:1:exon
so has part: feature:5376424-5376484:1:exon
so has part: feature:5376578-5376646:1:exon
so has part: feature:5376945-5377156:1:exon
so has part: feature:5377248-5377340:1:exon
so has part: feature:5377460-5377524:1:exon
so has part: feature:5377637-5378920:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5372483-5372576:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5373133-5373530:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5375565-5375621:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5375693-5375921:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5376424-5376484:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5376578-5376646:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5376945-5377156:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5377248-5377340:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5377460-5377524:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5377637-5378920:1:exon

LOC120251123
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: lncRNA
gene: LOC120251123
product: uncharacterized LOC120251123, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_005533363.1
SIO_010081: LOC120251123
subclass of: SO_0000673
so part of: LOC120251123
location: join(5372483..5372576,5373133..5373530,5375565..5375621,5375693..5375921,5376424..5376484,5376587..5376646,5376945..5377156,5377248..5377340,5377460..5377524,5377637..5378920)
location: region:5372483-5378920:1
so has part: feature:5372483-5372576:1:exon
so has part: feature:5373133-5373530:1:exon
so has part: feature:5375565-5375621:1:exon
so has part: feature:5375693-5375921:1:exon
so has part: feature:5376424-5376484:1:exon
so has part: feature:5376587-5376646:1:exon
so has part: feature:5376945-5377156:1:exon
so has part: feature:5377248-5377340:1:exon
so has part: feature:5377460-5377524:1:exon
so has part: feature:5377637-5378920:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5372483-5372576:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5373133-5373530:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5375565-5375621:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5375693-5375921:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5376424-5376484:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5376587-5376646:1:exon

position:5376587:1
position: 5376587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5376945-5377156:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5377248-5377340:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5377460-5377524:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5377637-5378920:1:exon

LOC120251123
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: lncRNA
gene: LOC120251123
product: uncharacterized LOC120251123, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XR_005533358.1
SIO_010081: LOC120251123
subclass of: SO_0000673
so part of: LOC120251123
location: join(5372483..5372576,5373133..5373530,5375565..5375621,5375693..5375921,5376574..5376646,5376945..5377156,5377248..5377340,5377460..5377524,5377637..5378920)
location: region:5372483-5378920:1
so has part: feature:5372483-5372576:1:exon
so has part: feature:5373133-5373530:1:exon
so has part: feature:5375565-5375621:1:exon
so has part: feature:5375693-5375921:1:exon
so has part: feature:5376574-5376646:1:exon
so has part: feature:5376945-5377156:1:exon
so has part: feature:5377248-5377340:1:exon
so has part: feature:5377460-5377524:1:exon
so has part: feature:5377637-5378920:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5372483-5372576:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5373133-5373530:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5375565-5375621:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5375693-5375921:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5376574-5376646:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5376945-5377156:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5377248-5377340:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5377460-5377524:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5377637-5378920:1:exon

LOC120251123
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: lncRNA
gene: LOC120251123
product: uncharacterized LOC120251123, transcript variant X24
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XR_005533381.1
SIO_010081: LOC120251123
subclass of: SO_0000673
so part of: LOC120251123
location: join(5372483..5372576,5373133..5373530,5375565..5375621,5375693..5375921,5376574..5376646,5376945..5377156,5377248..5377340,5377460..5377524,5377637..5377847,5378084..5378920)
location: region:5372483-5378920:1
so has part: feature:5372483-5372576:1:exon
so has part: feature:5373133-5373530:1:exon
so has part: feature:5375565-5375621:1:exon
so has part: feature:5375693-5375921:1:exon
so has part: feature:5376574-5376646:1:exon
so has part: feature:5376945-5377156:1:exon
so has part: feature:5377248-5377340:1:exon
so has part: feature:5377460-5377524:1:exon
so has part: feature:5377637-5377847:1:exon
so has part: feature:5378084-5378920:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5372483-5372576:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5373133-5373530:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5375565-5375621:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5375693-5375921:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5376574-5376646:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5376945-5377156:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5377248-5377340:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5377460-5377524:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5377637-5377847:1:exon

position:5377847:1
position: 5377847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5378084-5378920:1:exon

position:5378084:1
position: 5378084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120251123
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: lncRNA
gene: LOC120251123
product: uncharacterized LOC120251123, transcript variant X26
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XR_005533383.1
SIO_010081: LOC120251123
subclass of: SO_0000673
so part of: LOC120251123
location: join(5372483..5372576,5373133..5373530,5375565..5375621,5375693..5375921,5376574..5376646,5376945..5377156,5377248..5377340,5377460..5377524,5377637..5377816,5378084..5378920)
location: region:5372483-5378920:1
so has part: feature:5372483-5372576:1:exon
so has part: feature:5373133-5373530:1:exon
so has part: feature:5375565-5375621:1:exon
so has part: feature:5375693-5375921:1:exon
so has part: feature:5376574-5376646:1:exon
so has part: feature:5376945-5377156:1:exon
so has part: feature:5377248-5377340:1:exon
so has part: feature:5377460-5377524:1:exon
so has part: feature:5377637-5377816:1:exon
so has part: feature:5378084-5378920:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5372483-5372576:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5373133-5373530:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5375565-5375621:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5375693-5375921:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5376574-5376646:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5376945-5377156:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5377248-5377340:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5377460-5377524:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5377637-5377816:1:exon

position:5377816:1
position: 5377816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5378084-5378920:1:exon

LOC120251123
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: lncRNA
gene: LOC120251123
product: uncharacterized LOC120251123, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XR_005533367.1
SIO_010081: LOC120251123
subclass of: SO_0000673
so part of: LOC120251123
location: join(5372483..5372576,5373133..5373530,5375565..5375621,5375693..5375921,5376574..5376646,5376945..5377156,5377248..5377340,5377460..5377524,5377643..5378920)
location: region:5372483-5378920:1
so has part: feature:5372483-5372576:1:exon
so has part: feature:5373133-5373530:1:exon
so has part: feature:5375565-5375621:1:exon
so has part: feature:5375693-5375921:1:exon
so has part: feature:5376574-5376646:1:exon
so has part: feature:5376945-5377156:1:exon
so has part: feature:5377248-5377340:1:exon
so has part: feature:5377460-5377524:1:exon
so has part: feature:5377643-5378920:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5372483-5372576:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5373133-5373530:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5375565-5375621:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5375693-5375921:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5376574-5376646:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5376945-5377156:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5377248-5377340:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5377460-5377524:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5377643-5378920:1:exon

position:5377643:1
position: 5377643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120251123
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: lncRNA
gene: LOC120251123
product: uncharacterized LOC120251123, transcript variant X23
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_005533380.1
SIO_010081: LOC120251123
subclass of: SO_0000673
so part of: LOC120251123
location: join(5372483..5372576,5373133..5373530,5375565..5375621,5375693..5375921,5376574..5376646,5376945..5377156,5377286..5377340,5377460..5377524,5377637..5378920)
location: region:5372483-5378920:1
so has part: feature:5372483-5372576:1:exon
so has part: feature:5373133-5373530:1:exon
so has part: feature:5375565-5375621:1:exon
so has part: feature:5375693-5375921:1:exon
so has part: feature:5376574-5376646:1:exon
so has part: feature:5376945-5377156:1:exon
so has part: feature:5377286-5377340:1:exon
so has part: feature:5377460-5377524:1:exon
so has part: feature:5377637-5378920:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5372483-5372576:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5373133-5373530:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5375565-5375621:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5375693-5375921:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5376574-5376646:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5376945-5377156:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5377286-5377340:1:exon

position:5377286:1
position: 5377286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5377460-5377524:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5377637-5378920:1:exon

LOC120251123
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: lncRNA
gene: LOC120251123
product: uncharacterized LOC120251123, transcript variant X15
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XR_005533372.1
SIO_010081: LOC120251123
subclass of: SO_0000673
so part of: LOC120251123
location: join(5372483..5372576,5373133..5373530,5375565..5375621,5375693..5375921,5376574..5376646,5376945..5377135,5377248..5377340,5377460..5377524,5377637..5378920)
location: region:5372483-5378920:1
so has part: feature:5372483-5372576:1:exon
so has part: feature:5373133-5373530:1:exon
so has part: feature:5375565-5375621:1:exon
so has part: feature:5375693-5375921:1:exon
so has part: feature:5376574-5376646:1:exon
so has part: feature:5376945-5377135:1:exon
so has part: feature:5377248-5377340:1:exon
so has part: feature:5377460-5377524:1:exon
so has part: feature:5377637-5378920:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5372483-5372576:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5373133-5373530:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5375565-5375621:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5375693-5375921:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5376574-5376646:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5376945-5377135:1:exon

position:5377135:1
position: 5377135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5377248-5377340:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5377460-5377524:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5377637-5378920:1:exon

LOC120251123
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: lncRNA
gene: LOC120251123
product: uncharacterized LOC120251123, transcript variant X13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XR_005533370.1
SIO_010081: LOC120251123
subclass of: SO_0000673
so part of: LOC120251123
location: join(5372483..5372576,5373133..5373530,5375565..5375621,5375693..5375921,5376574..5376646,5376945..5377128,5377248..5377340,5377460..5377524,5377637..5378920)
location: region:5372483-5378920:1
so has part: feature:5372483-5372576:1:exon
so has part: feature:5373133-5373530:1:exon
so has part: feature:5375565-5375621:1:exon
so has part: feature:5375693-5375921:1:exon
so has part: feature:5376574-5376646:1:exon
so has part: feature:5376945-5377128:1:exon
so has part: feature:5377248-5377340:1:exon
so has part: feature:5377460-5377524:1:exon
so has part: feature:5377637-5378920:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5372483-5372576:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5373133-5373530:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5375565-5375621:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5375693-5375921:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5376574-5376646:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5376945-5377128:1:exon

position:5377128:1
position: 5377128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5377248-5377340:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5377460-5377524:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5377637-5378920:1:exon

LOC120251123
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: lncRNA
gene: LOC120251123
product: uncharacterized LOC120251123, transcript variant X27
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XR_005533384.1
SIO_010081: LOC120251123
subclass of: SO_0000673
so part of: LOC120251123
location: join(5372483..5372576,5373133..5373530,5375565..5375621,5375693..5375921,5376574..5376646,5376945..5377128,5377286..5377340,5377460..5377524,5377637..5378920)
location: region:5372483-5378920:1
so has part: feature:5372483-5372576:1:exon
so has part: feature:5373133-5373530:1:exon
so has part: feature:5375565-5375621:1:exon
so has part: feature:5375693-5375921:1:exon
so has part: feature:5376574-5376646:1:exon
so has part: feature:5376945-5377128:1:exon
so has part: feature:5377286-5377340:1:exon
so has part: feature:5377460-5377524:1:exon
so has part: feature:5377637-5378920:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5372483-5372576:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5373133-5373530:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5375565-5375621:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5375693-5375921:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5376574-5376646:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5376945-5377128:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5377286-5377340:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5377460-5377524:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5377637-5378920:1:exon

LOC120251123
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: lncRNA
gene: LOC120251123
product: uncharacterized LOC120251123, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XR_005533365.1
SIO_010081: LOC120251123
subclass of: SO_0000673
so part of: LOC120251123
location: join(5372483..5372576,5373133..5373530,5375565..5375621,5375693..5375921,5376578..5376646,5376945..5377156,5377248..5377340,5377460..5377524,5377637..5378920)
location: region:5372483-5378920:1
so has part: feature:5372483-5372576:1:exon
so has part: feature:5373133-5373530:1:exon
so has part: feature:5375565-5375621:1:exon
so has part: feature:5375693-5375921:1:exon
so has part: feature:5376578-5376646:1:exon
so has part: feature:5376945-5377156:1:exon
so has part: feature:5377248-5377340:1:exon
so has part: feature:5377460-5377524:1:exon
so has part: feature:5377637-5378920:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5372483-5372576:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5373133-5373530:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5375565-5375621:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5375693-5375921:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5376578-5376646:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5376945-5377156:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5377248-5377340:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5377460-5377524:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5377637-5378920:1:exon

LOC120251123
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: lncRNA
gene: LOC120251123
product: uncharacterized LOC120251123, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_005533366.1
SIO_010081: LOC120251123
subclass of: SO_0000673
so part of: LOC120251123
location: join(5372483..5372576,5373133..5373530,5375565..5375621,5375693..5375921,5376587..5376646,5376945..5377156,5377248..5377340,5377460..5377524,5377637..5378920)
location: region:5372483-5378920:1
so has part: feature:5372483-5372576:1:exon
so has part: feature:5373133-5373530:1:exon
so has part: feature:5375565-5375621:1:exon
so has part: feature:5375693-5375921:1:exon
so has part: feature:5376587-5376646:1:exon
so has part: feature:5376945-5377156:1:exon
so has part: feature:5377248-5377340:1:exon
so has part: feature:5377460-5377524:1:exon
so has part: feature:5377637-5378920:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5372483-5372576:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5373133-5373530:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5375565-5375621:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5375693-5375921:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5376587-5376646:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5376945-5377156:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5377248-5377340:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5377460-5377524:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5377637-5378920:1:exon

LOC120251123
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: lncRNA
gene: LOC120251123
product: uncharacterized LOC120251123, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XR_005533368.1
SIO_010081: LOC120251123
subclass of: SO_0000673
so part of: LOC120251123
location: join(5372483..5372576,5373133..5373530,5375565..5375621,5375693..5375921,5376945..5377156,5377248..5377340,5377460..5377524,5377637..5378920)
location: region:5372483-5378920:1
so has part: feature:5372483-5372576:1:exon
so has part: feature:5373133-5373530:1:exon
so has part: feature:5375565-5375621:1:exon
so has part: feature:5375693-5375921:1:exon
so has part: feature:5376945-5377156:1:exon
so has part: feature:5377248-5377340:1:exon
so has part: feature:5377460-5377524:1:exon
so has part: feature:5377637-5378920:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5372483-5372576:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5373133-5373530:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5375565-5375621:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5375693-5375921:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5376945-5377156:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5377248-5377340:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5377460-5377524:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5377637-5378920:1:exon

LOC120251123
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: lncRNA
gene: LOC120251123
product: uncharacterized LOC120251123, transcript variant X12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XR_005533369.1
SIO_010081: LOC120251123
subclass of: SO_0000673
so part of: LOC120251123
location: join(5372483..5372576,5373133..5373530,5375565..5375621,5375697..5375921,5376574..5376646,5376945..5377156,5377248..5377340,5377460..5377524,5377637..5378920)
location: region:5372483-5378920:1
so has part: feature:5372483-5372576:1:exon
so has part: feature:5373133-5373530:1:exon
so has part: feature:5375565-5375621:1:exon
so has part: feature:5375697-5375921:1:exon
so has part: feature:5376574-5376646:1:exon
so has part: feature:5376945-5377156:1:exon
so has part: feature:5377248-5377340:1:exon
so has part: feature:5377460-5377524:1:exon
so has part: feature:5377637-5378920:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5372483-5372576:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5373133-5373530:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5375565-5375621:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5375697-5375921:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5376574-5376646:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5376945-5377156:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5377248-5377340:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5377460-5377524:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5377637-5378920:1:exon

LOC120251123
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: lncRNA
gene: LOC120251123
product: uncharacterized LOC120251123, transcript variant X17
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XR_005533374.1
SIO_010081: LOC120251123
subclass of: SO_0000673
so part of: LOC120251123
location: join(5372483..5372576,5373133..5373530,5375565..5375621,5376574..5376646,5376945..5377156,5377248..5377340,5377460..5377524,5377637..5378920)
location: region:5372483-5378920:1
so has part: feature:5372483-5372576:1:exon
so has part: feature:5373133-5373530:1:exon
so has part: feature:5375565-5375621:1:exon
so has part: feature:5376574-5376646:1:exon
so has part: feature:5376945-5377156:1:exon
so has part: feature:5377248-5377340:1:exon
so has part: feature:5377460-5377524:1:exon
so has part: feature:5377637-5378920:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5372483-5372576:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5373133-5373530:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5375565-5375621:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5376574-5376646:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5376945-5377156:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5377248-5377340:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5377460-5377524:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5377637-5378920:1:exon

LOC120251123
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: lncRNA
gene: LOC120251123
product: uncharacterized LOC120251123, transcript variant X22
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XR_005533379.1
SIO_010081: LOC120251123
subclass of: SO_0000673
so part of: LOC120251123
location: join(5372483..5372576,5373133..5373530,5375565..5375621,5376945..5377156,5377248..5377340,5377460..5377524,5377637..5378920)
location: region:5372483-5378920:1
so has part: feature:5372483-5372576:1:exon
so has part: feature:5373133-5373530:1:exon
so has part: feature:5375565-5375621:1:exon
so has part: feature:5376945-5377156:1:exon
so has part: feature:5377248-5377340:1:exon
so has part: feature:5377460-5377524:1:exon
so has part: feature:5377637-5378920:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5372483-5372576:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5373133-5373530:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5375565-5375621:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5376945-5377156:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5377248-5377340:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5377460-5377524:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5377637-5378920:1:exon

LOC120251123
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: lncRNA
gene: LOC120251123
product: uncharacterized LOC120251123, transcript variant X20
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XR_005533377.1
SIO_010081: LOC120251123
subclass of: SO_0000673
so part of: LOC120251123
location: join(5372491..5372576,5373133..5373139,5375565..5375621,5375693..5375921,5376574..5376646,5376945..5377156,5377248..5377340,5377460..5377524,5377637..5378920)
location: region:5372491-5378920:1
so has part: feature:5372491-5372576:1:exon
so has part: feature:5373133-5373139:1:exon
so has part: feature:5375565-5375621:1:exon
so has part: feature:5375693-5375921:1:exon
so has part: feature:5376574-5376646:1:exon
so has part: feature:5376945-5377156:1:exon
so has part: feature:5377248-5377340:1:exon
so has part: feature:5377460-5377524:1:exon
so has part: feature:5377637-5378920:1:exon

position:5372491:1
position: 5372491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5372491-5372576:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5373133-5373139:1:exon

position:5373139:1
position: 5373139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5375565-5375621:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5375693-5375921:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5376574-5376646:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5376945-5377156:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5377248-5377340:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5377460-5377524:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5377637-5378920:1:exon

LOC120251123
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: lncRNA
gene: LOC120251123
product: uncharacterized LOC120251123, transcript variant X18
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_005533375.1
SIO_010081: LOC120251123
subclass of: SO_0000673
so part of: LOC120251123
location: join(5372491..5372576,5374987..5375013,5375565..5375921,5376574..5376646,5376945..5377156,5377248..5377340,5377460..5377524,5377637..5378920)
location: region:5372491-5378920:1
so has part: feature:5372491-5372576:1:exon
so has part: feature:5374987-5375013:1:exon
so has part: feature:5375565-5375921:1:exon
so has part: feature:5376574-5376646:1:exon
so has part: feature:5376945-5377156:1:exon
so has part: feature:5377248-5377340:1:exon
so has part: feature:5377460-5377524:1:exon
so has part: feature:5377637-5378920:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5372491-5372576:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5374987-5375013:1:exon

position:5374987:1
position: 5374987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5375013:1
position: 5375013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5375565-5375921:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5376574-5376646:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5376945-5377156:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5377248-5377340:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5377460-5377524:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5377637-5378920:1:exon

LOC120251123
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: lncRNA
gene: LOC120251123
product: uncharacterized LOC120251123, transcript variant X19
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XR_005533376.1
SIO_010081: LOC120251123
subclass of: SO_0000673
so part of: LOC120251123
location: join(5375020..5375461,5375565..5375621,5375693..5375921,5376574..5376646,5376945..5377156,5377248..5377340,5377460..5377524,5377637..5378920)
location: region:5375020-5378920:1
so has part: feature:5375020-5375461:1:exon
so has part: feature:5375565-5375621:1:exon
so has part: feature:5375693-5375921:1:exon
so has part: feature:5376574-5376646:1:exon
so has part: feature:5376945-5377156:1:exon
so has part: feature:5377248-5377340:1:exon
so has part: feature:5377460-5377524:1:exon
so has part: feature:5377637-5378920:1:exon

position:5375020:1
position: 5375020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5375020-5375461:1:exon

position:5375461:1
position: 5375461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5375565-5375621:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5375693-5375921:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5376574-5376646:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5376945-5377156:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5377248-5377340:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5377460-5377524:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5377637-5378920:1:exon

LOC120251123
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: lncRNA
gene: LOC120251123
product: uncharacterized LOC120251123, transcript variant X25
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XR_005533382.1
SIO_010081: LOC120251123
subclass of: SO_0000673
so part of: LOC120251123
location: join(5375020..5375461,5375565..5375621,5375697..5375921,5376574..5376646,5376945..5377156,5377248..5377340,5377460..5377524,5377637..5378920)
location: region:5375020-5378920:1
so has part: feature:5375020-5375461:1:exon
so has part: feature:5375565-5375621:1:exon
so has part: feature:5375697-5375921:1:exon
so has part: feature:5376574-5376646:1:exon
so has part: feature:5376945-5377156:1:exon
so has part: feature:5377248-5377340:1:exon
so has part: feature:5377460-5377524:1:exon
so has part: feature:5377637-5378920:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5375020-5375461:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5375565-5375621:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5375697-5375921:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5376574-5376646:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5376945-5377156:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5377248-5377340:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5377460-5377524:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5377637-5378920:1:exon

LOC120251275
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120251275
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5442838..5443341)
location: region:5442838-5443341:-1
so has part: feature:5442838-5443341:-1:exon
subclass of: SO_0000010

120251275
type: Gene
SIO_000068: ncbigene

position:5442838:-1
position: 5442838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5443341:-1
position: 5443341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5442838-5443341:-1:exon

LOC120251275
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 55577
gene: LOC120251275
product: uncharacterized mitochondrial protein AtMg00810-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_039259834.1
SIO_010081: LOC120251275
subclass of: SO_0000673
so part of: LOC120251275
location: complement(5442838..5443341)
location: region:5442838-5443341:-1
so has part: feature:5442838-5443341:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5442838-5443341:-1:exon

LOC120251275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 55577
gene: LOC120251275
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized mitochondrial protein AtMg00810-like
translation: MVGELNYLLGLQIKQCKEGIFISQTKYAQNLVKRFGLEKARYMRTPMSMNQKLTKDEHGKDIDPSLYTSMIGSLLYLTASRPDISFSVGGCARYEATPKESHLKAVKRIIRYVYGTVEYGIWYSKDSNSHLAGNSDADWAVNINDRKSTLGGCFYLGNNLVTWYSKK
SIO_010081: LOC120251275
subclass of: SO_0000673
so part of: LOC120251275
location: complement(5442838..5443341)
location: region:5442838-5443341:-1
so has part: feature:5442838-5443341:-1:exon

XP_039115768.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5442838-5443341:-1:exon

LOC120252199
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252199
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 5470832..5470936
location: region:5470832-5470936:1
so has part: feature:5470832-5470936:1:exon
subclass of: SO_0000578

120252199
type: Gene
SIO_000068: ncbigene

position:5470832:1
position: 5470832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5470936:1
position: 5470936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5470832-5470936:1:exon

LOC120252199
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252199
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533740.1
SIO_010081: LOC120252199
subclass of: SO_0000673
so part of: LOC120252199
location: 5470832..5470936
location: region:5470832-5470936:1
so has part: feature:5470832-5470936:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5470832-5470936:1:exon

LOC120251990
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120251990
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(5515516..5515622)
location: region:5515516-5515622:-1
so has part: feature:5515516-5515622:-1:exon
subclass of: SO_0000578

120251990
type: Gene
SIO_000068: ncbigene

position:5515516:-1
position: 5515516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5515622:-1
position: 5515622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5515516-5515622:-1:exon

LOC120251990
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120251990
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533546.1
SIO_010081: LOC120251990
subclass of: SO_0000673
so part of: LOC120251990
location: complement(5515516..5515622)
location: region:5515516-5515622:-1
so has part: feature:5515516-5515622:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5515516-5515622:-1:exon

LOC120251276
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120251276
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5576189..5579519
location: region:5576189-5579519:1
so has part: feature:5576189-5579519:1:exon
subclass of: SO_0000010

120251276
type: Gene
SIO_000068: ncbigene

position:5576189:1
position: 5576189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5579519:1
position: 5579519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5576189-5579519:1:exon

LOC120251276
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 55577
gene: LOC120251276
product: zinc finger MYM-type protein 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_039259835.1
SIO_010081: LOC120251276
subclass of: SO_0000673
so part of: LOC120251276
location: join(5576189..5577133,5577565..5578164,5579098..5579124,5579211..5579334,5579380..5579519)
location: region:5576189-5579519:1
so has part: feature:5576189-5577133:1:exon
so has part: feature:5577565-5578164:1:exon
so has part: feature:5579098-5579124:1:exon
so has part: feature:5579211-5579334:1:exon
so has part: feature:5579380-5579519:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5576189-5577133:1:exon

position:5577133:1
position: 5577133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5577565-5578164:1:exon

position:5577565:1
position: 5577565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5578164:1
position: 5578164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5579098-5579124:1:exon

position:5579098:1
position: 5579098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5579124:1
position: 5579124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5579211-5579334:1:exon

position:5579211:1
position: 5579211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5579334:1
position: 5579334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5579380-5579519:1:exon

position:5579380:1
position: 5579380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120251276
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 55577
gene: LOC120251276
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger MYM-type protein 1-like
translation: MEVEYHTRLTTILDVTQFLLKQGLAFCGHDESSSSLNKSNFLELLEWYSLRNDKVFRAVNQNAPGNNQMTSLKIQKELANASAVEITCAIVDDIREKHFSLMIDEARDVSVMLQMGVVLRYVDKNGYVIERFLAMVHVLDTSTISLKNAIDCLFSKHGLSLSRLRGQGYDGASNMLGYINGLKALVLKENPYIRYIHYFAHRLQLVIVVVDKDNGIVSDFFQYVIMIVNTVGASRKRKDQLRQHHYDRLVEQLERVEIVSGRGKHQESSLARPGDTHWESHYTTIPQLISMWTSVLDVLQNVHDDGASNDHRSIAVIDLISQEMQNRFTETSTELLLLLSCLDPKDSFSKFNIYKLLHLAELYFEDFTMTERMMLEDQVATFIYDVRHDADFINVRNLRGFARKMVETGKHIIFPLIYHLIELALALPVVTASDERVFSAMNIVKTDLRNKMVNQWMNDSLVVYIEREVFATIDNEAILQRFQKMQTQRMQLSPLSLSHMAHISSINAGIGSSSSESCSTRQAQVPSSFHGKLGLSMNVLSPCIMLLAQLPIFTKVSRKARLKNAYLGLSKDGLARVLRSNFRQSLEVKTKHHHTFWEDQDSVGGTFEKWS
SIO_010081: LOC120251276
subclass of: SO_0000673
so part of: LOC120251276
location: join(5576189..5577133,5577565..5578164,5579098..5579124,5579211..5579334,5579380..5579519)
location: region:5576189-5579519:1
so has part: feature:5576189-5577133:1:exon
so has part: feature:5577565-5578164:1:exon
so has part: feature:5579098-5579124:1:exon
so has part: feature:5579211-5579334:1:exon
so has part: feature:5579380-5579519:1:exon

XP_039115769.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5576189-5577133:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5577565-5578164:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5579098-5579124:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5579211-5579334:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5579380-5579519:1:exon

LOC120251245
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120251245
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5596203..5600156)
location: region:5596203-5600156:-1
so has part: feature:5596203-5600156:-1:exon
subclass of: SO_0000010

120251245
type: Gene
SIO_000068: ncbigene

position:5596203:-1
position: 5596203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5600156:-1
position: 5600156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5596203-5600156:-1:exon

LOC120251245
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 55577
gene: LOC120251245
product: chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_005533406.1
SIO_010081: LOC120251245
so part of: LOC120251245
location: complement(join(5596203..5596239,5599138..5599251,5599454..5599521,5599617..5600156))
location: region:5596203-5600156:-1
so has part: feature:5599617-5600156:-1:exon
so has part: feature:5599454-5599521:-1:exon
so has part: feature:5599138-5599251:-1:exon
so has part: feature:5596203-5596239:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5599617-5600156:-1:exon

position:5599617:-1
position: 5599617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5599454-5599521:-1:exon

position:5599454:-1
position: 5599454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5599521:-1
position: 5599521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5599138-5599251:-1:exon

position:5599138:-1
position: 5599138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5599251:-1
position: 5599251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5596203-5596239:-1:exon

position:5596239:-1
position: 5596239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120251245
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 55577
gene: LOC120251245
product: chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_005533407.1
SIO_010081: LOC120251245
so part of: LOC120251245
location: complement(join(5596357..5596621,5599138..5599251,5599454..5599521,5599617..5600156))
location: region:5596357-5600156:-1
so has part: feature:5599617-5600156:-1:exon
so has part: feature:5599454-5599521:-1:exon
so has part: feature:5599138-5599251:-1:exon
so has part: feature:5596357-5596621:-1:exon

position:5596357:-1
position: 5596357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5599617-5600156:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5599454-5599521:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5599138-5599251:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5596357-5596621:-1:exon

position:5596621:-1
position: 5596621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120251245
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 55577
gene: LOC120251245
product: chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XR_005533405.1
SIO_010081: LOC120251245
so part of: LOC120251245
location: complement(join(5599029..5599251,5599454..5599521,5599617..5600156))
location: region:5599029-5600156:-1
so has part: feature:5599617-5600156:-1:exon
so has part: feature:5599454-5599521:-1:exon
so has part: feature:5599029-5599251:-1:exon

position:5599029:-1
position: 5599029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5599617-5600156:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5599454-5599521:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5599029-5599251:-1:exon

LOC120251245
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 55577
gene: LOC120251245
product: chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic-like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_005533408.1
SIO_010081: LOC120251245
so part of: LOC120251245
location: complement(join(5599029..5599251,5599360..5599521,5599617..5600156))
location: region:5599029-5600156:-1
so has part: feature:5599617-5600156:-1:exon
so has part: feature:5599360-5599521:-1:exon
so has part: feature:5599029-5599251:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5599617-5600156:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5599360-5599521:-1:exon

position:5599360:-1
position: 5599360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5599029-5599251:-1:exon

LOC120251245
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 55577
gene: LOC120251245
product: chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_039259792.1
SIO_010081: LOC120251245
subclass of: SO_0000673
so part of: LOC120251245
location: complement(join(5599029..5599251,5599454..5599526,5599617..5600156))
location: region:5599029-5600156:-1
so has part: feature:5599617-5600156:-1:exon
so has part: feature:5599454-5599526:-1:exon
so has part: feature:5599029-5599251:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5599617-5600156:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5599454-5599526:-1:exon

position:5599526:-1
position: 5599526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5599029-5599251:-1:exon

LOC120251245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 55577
gene: LOC120251245
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic-like
translation: MLALSPLSYHLFVSSPGMKLRIPLNKHLYLIGWRLSRHATSLSIKWLRSTFVVPLPTPPSFKAPPRPYQNPSASSQPQLSPLPKTPSSSHPSLLNPSHAKIAIFTTSQIHFSITNYSKCNDQVITGTPPTTIQGLISNCVGLIGEVTILLVKPQAYMNYNGESMCLREIIFST
SIO_010081: LOC120251245
subclass of: SO_0000673
so part of: LOC120251245
location: complement(join(5599219..5599251,5599454..5599526,5599617..5600032))
location: region:5599219-5600032:-1
so has part: feature:5599617-5600032:-1:exon
so has part: feature:5599454-5599526:-1:exon
so has part: feature:5599219-5599251:-1:exon

XP_039115726.1
type: Protein
SIO_000068: ncbiprotein

position:5599219:-1
position: 5599219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5600032:-1
position: 5600032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5599617-5600032:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5599454-5599526:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5599219-5599251:-1:exon

LOC120251277
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120251277
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5645843..5652427
location: region:5645843-5652427:1
so has part: feature:5645843-5652427:1:exon
subclass of: SO_0000010

120251277
type: Gene
SIO_000068: ncbigene

position:5645843:1
position: 5645843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5652427:1
position: 5652427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5645843-5652427:1:exon

LOC120251277
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 55577
gene: LOC120251277
product: uncharacterized LOC120251277
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 98% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_039259836.1
SIO_010081: LOC120251277
subclass of: SO_0000673
so part of: LOC120251277
location: join(5645843..5645959,5646050..5646348,5648196..5648645,5648924..5648953,5649559..5649658,5650592..5650706,5651026..5652427)
location: region:5645843-5652427:1
so has part: feature:5645843-5645959:1:exon
so has part: feature:5646050-5646348:1:exon
so has part: feature:5648196-5648645:1:exon
so has part: feature:5648924-5648953:1:exon
so has part: feature:5649559-5649658:1:exon
so has part: feature:5650592-5650706:1:exon
so has part: feature:5651026-5652427:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5645843-5645959:1:exon

position:5645959:1
position: 5645959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5646050-5646348:1:exon

position:5646050:1
position: 5646050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5646348:1
position: 5646348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5648196-5648645:1:exon

position:5648196:1
position: 5648196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5648645:1
position: 5648645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5648924-5648953:1:exon

position:5648924:1
position: 5648924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5648953:1
position: 5648953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5649559-5649658:1:exon

position:5649559:1
position: 5649559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5649658:1
position: 5649658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5650592-5650706:1:exon

position:5650592:1
position: 5650592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5650706:1
position: 5650706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5651026-5652427:1:exon

position:5651026:1
position: 5651026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120251277
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 55577
gene: LOC120251277
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC120251277
translation: MNRDRSWMYCRKDGASFINDEFVKGVEEFISFAYSQTTIVSGDSIKCPCHRCENSMFQIADMVRKHLYYNGFMIGYTSWTSHGEHEIGQSSRYGDEHIHTMPQIEARNPYAQMMMDFISPTFNIPRYHDTGSSFMEEEPNPKASTFYSLLNDADEPLYEGCTKYSKLSALSQLLNLKSDFNMSEACFDRLMVMIKYMLPQDECLPNNFYRTKQKMKSLGMGYEKIDVCQNNCMLFYKEAAKLDHCAMCGHPRYKMRQLGKSKKGKQKQIPCKILRYLPLIPRLQRLYMSAKTAENMIWHVTNKSTDGVLRHPVDGEAWQHFDQMYPSFAQESRNVRLGLCADGFSPFGPAAKPYSIWPVMLVVYNLPPWMCMNQSYIFLNMVIPRKKSPGQNIDVFLRPLIDELKQLWNDGILTYDAFKKQNFTMRASLLWTINDFPAYGMLSGLSTHGTLSCPY
SIO_010081: LOC120251277
subclass of: SO_0000673
so part of: LOC120251277
location: 5651060..5652427
location: region:5651060-5652427:1
so has part: feature:5651060-5652427:1:exon

XP_039115770.1
type: Protein
SIO_000068: ncbiprotein

position:5651060:1
position: 5651060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5651060-5652427:1:exon

LOC120251572
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120251572
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5653162..5654317
location: region:5653162-5654317:1
so has part: feature:5653162-5654317:1:exon
subclass of: SO_0000010

120251572
type: Gene
SIO_000068: ncbigene

position:5653162:1
position: 5653162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5654317:1
position: 5654317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5653162-5654317:1:exon

LOC120251572
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 55577
gene: LOC120251572
product: uncharacterized LOC120251572
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_039260137.1
SIO_010081: LOC120251572
subclass of: SO_0000673
so part of: LOC120251572
location: join(5653162..5653361,5653439..5653753,5653842..5653941,5654027..5654317)
location: region:5653162-5654317:1
so has part: feature:5653162-5653361:1:exon
so has part: feature:5653439-5653753:1:exon
so has part: feature:5653842-5653941:1:exon
so has part: feature:5654027-5654317:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5653162-5653361:1:exon

position:5653361:1
position: 5653361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5653439-5653753:1:exon

position:5653439:1
position: 5653439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5653753:1
position: 5653753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5653842-5653941:1:exon

position:5653842:1
position: 5653842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5653941:1
position: 5653941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5654027-5654317:1:exon

position:5654027:1
position: 5654027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120251572
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 55577
gene: LOC120251572
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC120251572
translation: MEHLPIHLPYEAKVGGPVQYRWMYPFERFLHHLKKKVKNQACVEGSICEAYIIQEISSFCSMYFESTVETRLNRVPRNDDGGDVESVGRLSIFSHPGRPFGPMNNARFLEDGEHYAAELYVLMNCEEIYPYVEMFDEMAKKECVNISDKELEKLRDTRFPKWFRQFVAKHKDEIDPRVVEMSYGPGRIAQCYKGCFTNGFKFHTPRLWE
SIO_010081: LOC120251572
subclass of: SO_0000673
so part of: LOC120251572
location: join(5653279..5653361,5653439..5653753,5653842..5653941,5654027..5654158)
location: region:5653279-5654158:1
so has part: feature:5653279-5653361:1:exon
so has part: feature:5653439-5653753:1:exon
so has part: feature:5653842-5653941:1:exon
so has part: feature:5654027-5654158:1:exon

XP_039116071.1
type: Protein
SIO_000068: ncbiprotein

position:5653279:1
position: 5653279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5654158:1
position: 5654158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5653279-5653361:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5653439-5653753:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5653842-5653941:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5654027-5654158:1:exon

LOC120251571
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120251571
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5654356..5657048
location: region:5654356-5657048:1
so has part: feature:5654356-5657048:1:exon
subclass of: SO_0000010

120251571
type: Gene
SIO_000068: ncbigene

position:5654356:1
position: 5654356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5657048:1
position: 5657048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5654356-5657048:1:exon

LOC120251571
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 55577
gene: LOC120251571
product: uncharacterized LOC120251571, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_039260135.1
SIO_010081: LOC120251571
subclass of: SO_0000673
so part of: LOC120251571
location: join(5654356..5655100,5655225..5655351,5655428..5655766,5655882..5655989,5656098..5656506,5656622..5656666,5656780..5657048)
location: region:5654356-5657048:1
so has part: feature:5654356-5655100:1:exon
so has part: feature:5655225-5655351:1:exon
so has part: feature:5655428-5655766:1:exon
so has part: feature:5655882-5655989:1:exon
so has part: feature:5656098-5656506:1:exon
so has part: feature:5656622-5656666:1:exon
so has part: feature:5656780-5657048:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5654356-5655100:1:exon

position:5655100:1
position: 5655100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5655225-5655351:1:exon

position:5655225:1
position: 5655225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5655351:1
position: 5655351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5655428-5655766:1:exon

position:5655428:1
position: 5655428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5655766:1
position: 5655766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5655882-5655989:1:exon

position:5655882:1
position: 5655882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5655989:1
position: 5655989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5656098-5656506:1:exon

position:5656098:1
position: 5656098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5656506:1
position: 5656506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5656622-5656666:1:exon

position:5656622:1
position: 5656622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5656666:1
position: 5656666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5656780-5657048:1:exon

position:5656780:1
position: 5656780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120251571
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 55577
gene: LOC120251571
product: uncharacterized LOC120251571, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_039260136.1
SIO_010081: LOC120251571
subclass of: SO_0000673
so part of: LOC120251571
location: join(5654356..5655100,5655225..5655351,5655428..5655766,5655882..5655989,5656098..5656506,5656622..5656666,5656776..5657047)
location: region:5654356-5657047:1
so has part: feature:5654356-5655100:1:exon
so has part: feature:5655225-5655351:1:exon
so has part: feature:5655428-5655766:1:exon
so has part: feature:5655882-5655989:1:exon
so has part: feature:5656098-5656506:1:exon
so has part: feature:5656622-5656666:1:exon
so has part: feature:5656776-5657047:1:exon

position:5657047:1
position: 5657047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5654356-5655100:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5655225-5655351:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5655428-5655766:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5655882-5655989:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5656098-5656506:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5656622-5656666:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5656776-5657047:1:exon

position:5656776:1
position: 5656776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120251571
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 55577
gene: LOC120251571
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC120251571 isoform X1
translation: MMASSMGNPGNQTSTNNDPPLEVPSNSSIEPIVNETLELGSGGLSTAGEDVARQRRTRGPTLGRIAPEDANKKRTLTILGDSVFAEKGVSSTIVKIIKNYFTGVWPTWRKIPDDVKEAMWKKFGEYFNWPLQEEPNVRRVWEKTCKERLKDTLNGERTKAMKEAGVTNIIDIKKCKGMKRHWMPTEIWDVLIDTVWSTESWQNKSKKALANRLTEKEGSITKHTSGSRSFLATQKLMEEELQRPIHYPELFERTHKRSKGSGDFVDNKSKVVSDKYQSTLSEKYGDNTSDHPEFDPEAWASSIGGKIATRTHVYGFGTMVNSKALFDATSSAAACTTNSVCGPSTSTPHMDVSLNDDRIVSLEQKLESLTDDVSQVKNAVGDISDLKNQFQIMMSFMMEKFGSNIPPPTKEDLGGKKRATKKTQDNGQEEGTKKIKVMFMMTSYFTLFVGDKCIDGLENC
SIO_010081: LOC120251571
subclass of: SO_0000673
so part of: LOC120251571
location: join(5654856..5655100,5655225..5655351,5655428..5655766,5655882..5655989,5656098..5656506,5656622..5656666,5656780..5656889)
location: region:5654856-5656889:1
so has part: feature:5654856-5655100:1:exon
so has part: feature:5655225-5655351:1:exon
so has part: feature:5655428-5655766:1:exon
so has part: feature:5655882-5655989:1:exon
so has part: feature:5656098-5656506:1:exon
so has part: feature:5656622-5656666:1:exon
so has part: feature:5656780-5656889:1:exon

XP_039116069.1
type: Protein
SIO_000068: ncbiprotein

position:5654856:1
position: 5654856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5656889:1
position: 5656889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5654856-5655100:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5655225-5655351:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5655428-5655766:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5655882-5655989:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5656098-5656506:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5656622-5656666:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5656780-5656889:1:exon

LOC120251571
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 55577
gene: LOC120251571
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC120251571 isoform X2
translation: MMASSMGNPGNQTSTNNDPPLEVPSNSSIEPIVNETLELGSGGLSTAGEDVARQRRTRGPTLGRIAPEDANKKRTLTILGDSVFAEKGVSSTIVKIIKNYFTGVWPTWRKIPDDVKEAMWKKFGEYFNWPLQEEPNVRRVWEKTCKERLKDTLNGERTKAMKEAGVTNIIDIKKCKGMKRHWMPTEIWDVLIDTVWSTESWQNKSKKALANRLTEKEGSITKHTSGSRSFLATQKLMEEELQRPIHYPELFERTHKRSKGSGDFVDNKSKVVSDKYQSTLSEKYGDNTSDHPEFDPEAWASSIGGKIATRTHVYGFGTMVNSKALFDATSSAAACTTNSVCGPSTSTPHMDVSLNDDRIVSLEQKLESLTDDVSQVKNAVGDISDLKNQFQIMMSFMMEKFGSNIPPPTKEDLGGKKRATKKTQGRQWPRRGNKENQSNVHDDFLFHFVCW
SIO_010081: LOC120251571
subclass of: SO_0000673
so part of: LOC120251571
location: join(5654856..5655100,5655225..5655351,5655428..5655766,5655882..5655989,5656098..5656506,5656622..5656666,5656776..5656858)
location: region:5654856-5656858:1
so has part: feature:5654856-5655100:1:exon
so has part: feature:5655225-5655351:1:exon
so has part: feature:5655428-5655766:1:exon
so has part: feature:5655882-5655989:1:exon
so has part: feature:5656098-5656506:1:exon
so has part: feature:5656622-5656666:1:exon
so has part: feature:5656776-5656858:1:exon

XP_039116070.1
type: Protein
SIO_000068: ncbiprotein

position:5656858:1
position: 5656858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5654856-5655100:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5655225-5655351:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5655428-5655766:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5655882-5655989:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5656098-5656506:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5656622-5656666:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5656776-5656858:1:exon

LOC120251834
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120251834
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5740258..5742911
location: region:5740258-5742911:1
so has part: feature:5740258-5742911:1:exon
subclass of: SO_0000011

120251834
type: Gene
SIO_000068: ncbigene

position:5740258:1
position: 5740258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5742911:1
position: 5742911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5740258-5742911:1:exon

LOC120251834
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: lncRNA
gene: LOC120251834
product: uncharacterized LOC120251834
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XR_005533503.1
SIO_010081: LOC120251834
subclass of: SO_0000673
so part of: LOC120251834
location: join(5740258..5740549,5742529..5742911)
location: region:5740258-5742911:1
so has part: feature:5740258-5740549:1:exon
so has part: feature:5742529-5742911:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5740258-5740549:1:exon

position:5740549:1
position: 5740549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5742529-5742911:1:exon

position:5742529:1
position: 5742529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120252063
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252063
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 5884680..5884786
location: region:5884680-5884786:1
so has part: feature:5884680-5884786:1:exon
subclass of: SO_0000578

120252063
type: Gene
SIO_000068: ncbigene

position:5884680:1
position: 5884680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5884786:1
position: 5884786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5884680-5884786:1:exon

LOC120252063
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252063
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533614.1
SIO_010081: LOC120252063
subclass of: SO_0000673
so part of: LOC120252063
location: 5884680..5884786
location: region:5884680-5884786:1
so has part: feature:5884680-5884786:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5884680-5884786:1:exon

LOC120252015
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252015
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 5891654..5891760
location: region:5891654-5891760:1
so has part: feature:5891654-5891760:1:exon
subclass of: SO_0000578

120252015
type: Gene
SIO_000068: ncbigene

position:5891654:1
position: 5891654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5891760:1
position: 5891760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5891654-5891760:1:exon

LOC120252015
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252015
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533569.1
SIO_010081: LOC120252015
subclass of: SO_0000673
so part of: LOC120252015
location: 5891654..5891760
location: region:5891654-5891760:1
so has part: feature:5891654-5891760:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5891654-5891760:1:exon

LOC120252019
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252019
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(5895450..5895556)
location: region:5895450-5895556:-1
so has part: feature:5895450-5895556:-1:exon
subclass of: SO_0000578

120252019
type: Gene
SIO_000068: ncbigene

position:5895450:-1
position: 5895450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5895556:-1
position: 5895556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5895450-5895556:-1:exon

LOC120252019
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252019
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533572.1
SIO_010081: LOC120252019
subclass of: SO_0000673
so part of: LOC120252019
location: complement(5895450..5895556)
location: region:5895450-5895556:-1
so has part: feature:5895450-5895556:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5895450-5895556:-1:exon

LOC120251279
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120251279
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(5902344..5904224)
location: region:5902344-5904224:-1
so has part: feature:5902344-5904224:-1:exon

120251279
type: Gene
SIO_000068: ncbigene

position:5902344:-1
position: 5902344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5904224:-1
position: 5904224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5902344-5904224:-1:exon

LOC120251279
type: Exon
subclass of: SO_0000147
RO_0002162: 55577
gene: LOC120251279
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC120251279
subclass of: SO_0000673
so part of: LOC120251279
location: complement(5902344..5902433)
location: region:5902344-5902433:-1
so has part: feature:5902344-5902433:-1:exon

position:5902433:-1
position: 5902433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5902344-5902433:-1:exon

LOC120251279
type: Exon
subclass of: SO_0000147
RO_0002162: 55577
gene: LOC120251279
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC120251279
subclass of: SO_0000673
so part of: LOC120251279
location: complement(5902584..5902682)
location: region:5902584-5902682:-1
so has part: feature:5902584-5902682:-1:exon

position:5902584:-1
position: 5902584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5902682:-1
position: 5902682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5902584-5902682:-1:exon

LOC120251279
type: Exon
subclass of: SO_0000147
RO_0002162: 55577
gene: LOC120251279
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC120251279
subclass of: SO_0000673
so part of: LOC120251279
location: complement(5902852..5902970)
location: region:5902852-5902970:-1
so has part: feature:5902852-5902970:-1:exon

position:5902852:-1
position: 5902852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5902970:-1
position: 5902970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5902852-5902970:-1:exon

LOC120251279
type: Exon
subclass of: SO_0000147
RO_0002162: 55577
gene: LOC120251279
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC120251279
subclass of: SO_0000673
so part of: LOC120251279
location: complement(5903053..5903240)
location: region:5903053-5903240:-1
so has part: feature:5903053-5903240:-1:exon

position:5903053:-1
position: 5903053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5903240:-1
position: 5903240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5903053-5903240:-1:exon

LOC120251279
type: Exon
subclass of: SO_0000147
RO_0002162: 55577
gene: LOC120251279
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC120251279
subclass of: SO_0000673
so part of: LOC120251279
location: complement(5903428..5903554)
location: region:5903428-5903554:-1
so has part: feature:5903428-5903554:-1:exon

position:5903428:-1
position: 5903428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5903554:-1
position: 5903554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5903428-5903554:-1:exon

LOC120251279
type: Exon
subclass of: SO_0000147
RO_0002162: 55577
gene: LOC120251279
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC120251279
subclass of: SO_0000673
so part of: LOC120251279
location: complement(5903975..5904040)
location: region:5903975-5904040:-1
so has part: feature:5903975-5904040:-1:exon

position:5903975:-1
position: 5903975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5904040:-1
position: 5904040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5903975-5904040:-1:exon

LOC120251279
type: Exon
subclass of: SO_0000147
RO_0002162: 55577
gene: LOC120251279
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC120251279
subclass of: SO_0000673
so part of: LOC120251279
location: complement(5904158..5904224)
location: region:5904158-5904224:-1
so has part: feature:5904158-5904224:-1:exon

position:5904158:-1
position: 5904158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5904158-5904224:-1:exon

LOC120252304
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252304
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 5942306..5942413
location: region:5942306-5942413:1
so has part: feature:5942306-5942413:1:exon
subclass of: SO_0000578

120252304
type: Gene
SIO_000068: ncbigene

position:5942306:1
position: 5942306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5942413:1
position: 5942413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5942306-5942413:1:exon

LOC120252304
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252304
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533845.1
SIO_010081: LOC120252304
subclass of: SO_0000673
so part of: LOC120252304
location: 5942306..5942413
location: region:5942306-5942413:1
so has part: feature:5942306-5942413:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5942306-5942413:1:exon

LOC120252087
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252087
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(6064141..6064246)
location: region:6064141-6064246:-1
so has part: feature:6064141-6064246:-1:exon
subclass of: SO_0000578

120252087
type: Gene
SIO_000068: ncbigene

position:6064141:-1
position: 6064141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6064246:-1
position: 6064246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6064141-6064246:-1:exon

LOC120252087
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252087
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533636.1
SIO_010081: LOC120252087
subclass of: SO_0000673
so part of: LOC120252087
location: complement(6064141..6064246)
location: region:6064141-6064246:-1
so has part: feature:6064141-6064246:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6064141-6064246:-1:exon

LOC120252186
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252186
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 6221424..6221530
location: region:6221424-6221530:1
so has part: feature:6221424-6221530:1:exon
subclass of: SO_0000578

120252186
type: Gene
SIO_000068: ncbigene

position:6221424:1
position: 6221424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6221530:1
position: 6221530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6221424-6221530:1:exon

LOC120252186
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252186
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533729.1
SIO_010081: LOC120252186
subclass of: SO_0000673
so part of: LOC120252186
location: 6221424..6221530
location: region:6221424-6221530:1
so has part: feature:6221424-6221530:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6221424-6221530:1:exon

LOC120252429
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252429
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(6261951..6262056)
location: region:6261951-6262056:-1
so has part: feature:6261951-6262056:-1:exon
subclass of: SO_0000578

120252429
type: Gene
SIO_000068: ncbigene

position:6261951:-1
position: 6261951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6262056:-1
position: 6262056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6261951-6262056:-1:exon

LOC120252429
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252429
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533959.1
SIO_010081: LOC120252429
subclass of: SO_0000673
so part of: LOC120252429
location: complement(6261951..6262056)
location: region:6261951-6262056:-1
so has part: feature:6261951-6262056:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6261951-6262056:-1:exon

LOC120252001
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252001
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 6277585..6277691
location: region:6277585-6277691:1
so has part: feature:6277585-6277691:1:exon
subclass of: SO_0000578

120252001
type: Gene
SIO_000068: ncbigene

position:6277585:1
position: 6277585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6277691:1
position: 6277691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6277585-6277691:1:exon

LOC120252001
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252001
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533556.1
SIO_010081: LOC120252001
subclass of: SO_0000673
so part of: LOC120252001
location: 6277585..6277691
location: region:6277585-6277691:1
so has part: feature:6277585-6277691:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6277585-6277691:1:exon

LOC120252335
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252335
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 6350455..6350561
location: region:6350455-6350561:1
so has part: feature:6350455-6350561:1:exon
subclass of: SO_0000578

120252335
type: Gene
SIO_000068: ncbigene

position:6350455:1
position: 6350455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6350561:1
position: 6350561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6350455-6350561:1:exon

LOC120252335
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252335
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533874.1
SIO_010081: LOC120252335
subclass of: SO_0000673
so part of: LOC120252335
location: 6350455..6350561
location: region:6350455-6350561:1
so has part: feature:6350455-6350561:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6350455-6350561:1:exon

LOC120252251
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252251
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(6394847..6394953)
location: region:6394847-6394953:-1
so has part: feature:6394847-6394953:-1:exon
subclass of: SO_0000578

120252251
type: Gene
SIO_000068: ncbigene

position:6394847:-1
position: 6394847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6394953:-1
position: 6394953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6394847-6394953:-1:exon

LOC120252251
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252251
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533796.1
SIO_010081: LOC120252251
subclass of: SO_0000673
so part of: LOC120252251
location: complement(6394847..6394953)
location: region:6394847-6394953:-1
so has part: feature:6394847-6394953:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6394847-6394953:-1:exon

LOC120252426
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252426
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(6430487..6430593)
location: region:6430487-6430593:-1
so has part: feature:6430487-6430593:-1:exon
subclass of: SO_0000578

120252426
type: Gene
SIO_000068: ncbigene

position:6430487:-1
position: 6430487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6430593:-1
position: 6430593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6430487-6430593:-1:exon

LOC120252426
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252426
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533956.1
SIO_010081: LOC120252426
subclass of: SO_0000673
so part of: LOC120252426
location: complement(6430487..6430593)
location: region:6430487-6430593:-1
so has part: feature:6430487-6430593:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6430487-6430593:-1:exon

LOC120252033
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252033
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 6491615..6491721
location: region:6491615-6491721:1
so has part: feature:6491615-6491721:1:exon
subclass of: SO_0000578

120252033
type: Gene
SIO_000068: ncbigene

position:6491615:1
position: 6491615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6491721:1
position: 6491721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6491615-6491721:1:exon

LOC120252033
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252033
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533586.1
SIO_010081: LOC120252033
subclass of: SO_0000673
so part of: LOC120252033
location: 6491615..6491721
location: region:6491615-6491721:1
so has part: feature:6491615-6491721:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6491615-6491721:1:exon

LOC120252421
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252421
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 6516018..6516125
location: region:6516018-6516125:1
so has part: feature:6516018-6516125:1:exon
subclass of: SO_0000578

120252421
type: Gene
SIO_000068: ncbigene

position:6516018:1
position: 6516018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6516125:1
position: 6516125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6516018-6516125:1:exon

LOC120252421
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252421
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533951.1
SIO_010081: LOC120252421
subclass of: SO_0000673
so part of: LOC120252421
location: 6516018..6516125
location: region:6516018-6516125:1
so has part: feature:6516018-6516125:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6516018-6516125:1:exon

LOC120252308
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252308
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(6573948..6574054)
location: region:6573948-6574054:-1
so has part: feature:6573948-6574054:-1:exon
subclass of: SO_0000578

120252308
type: Gene
SIO_000068: ncbigene

position:6573948:-1
position: 6573948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6574054:-1
position: 6574054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6573948-6574054:-1:exon

LOC120252308
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252308
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533849.1
SIO_010081: LOC120252308
subclass of: SO_0000673
so part of: LOC120252308
location: complement(6573948..6574054)
location: region:6573948-6574054:-1
so has part: feature:6573948-6574054:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6573948-6574054:-1:exon

LOC120251280
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120251280
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6574580..6576977
location: region:6574580-6576977:1
so has part: feature:6574580-6576977:1:exon
subclass of: SO_0000010

120251280
type: Gene
SIO_000068: ncbigene

position:6574580:1
position: 6574580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6576977:1
position: 6576977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6574580-6576977:1:exon

LOC120251280
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 55577
gene: LOC120251280
product: uncharacterized LOC120251280
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_039259838.1
SIO_010081: LOC120251280
subclass of: SO_0000673
so part of: LOC120251280
location: join(6574580..6574783,6574889..6575066,6575241..6575437,6576864..6576977)
location: region:6574580-6576977:1
so has part: feature:6574580-6574783:1:exon
so has part: feature:6574889-6575066:1:exon
so has part: feature:6575241-6575437:1:exon
so has part: feature:6576864-6576977:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6574580-6574783:1:exon

position:6574783:1
position: 6574783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6574889-6575066:1:exon

position:6574889:1
position: 6574889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6575066:1
position: 6575066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6575241-6575437:1:exon

position:6575241:1
position: 6575241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6575437:1
position: 6575437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6576864-6576977:1:exon

position:6576864:1
position: 6576864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120251280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 55577
gene: LOC120251280
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC120251280
translation: MANPKESLMGVTLSSGMQLQNSIKKELELEVANPIMTTDMDVTTKDKTSILVYQQKPSFPAKARKDQQELLTHKRKLGNVFSLTPSEECSILLCNKLSKKEKDPGGFILPCTIGGLVDEKALADLGVNIDDKVEVPIILGRPFIATSNALIDVKDGRITLQGGDEETTFRLRDSMRHTIDFDNTCYCVDVVDEKMPRKDIAGGPSKRPRTDASSSGVEYQPTFHTRPHIE
SIO_010081: LOC120251280
subclass of: SO_0000673
so part of: LOC120251280
location: join(6574580..6574783,6574889..6575066,6575241..6575437,6576864..6576977)
location: region:6574580-6576977:1
so has part: feature:6574580-6574783:1:exon
so has part: feature:6574889-6575066:1:exon
so has part: feature:6575241-6575437:1:exon
so has part: feature:6576864-6576977:1:exon

XP_039115772.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6574580-6574783:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6574889-6575066:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6575241-6575437:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6576864-6576977:1:exon

LOC120252354
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252354
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(6619520..6619626)
location: region:6619520-6619626:-1
so has part: feature:6619520-6619626:-1:exon
subclass of: SO_0000578

120252354
type: Gene
SIO_000068: ncbigene

position:6619520:-1
position: 6619520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6619626:-1
position: 6619626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6619520-6619626:-1:exon

LOC120252354
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252354
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533891.1
SIO_010081: LOC120252354
subclass of: SO_0000673
so part of: LOC120252354
location: complement(6619520..6619626)
location: region:6619520-6619626:-1
so has part: feature:6619520-6619626:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6619520-6619626:-1:exon

LOC120251189
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120251189
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6644206..6645323)
location: region:6644206-6645323:-1
so has part: feature:6644206-6645323:-1:exon
subclass of: SO_0000010

120251189
type: Gene
SIO_000068: ncbigene

position:6644206:-1
position: 6644206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6645323:-1
position: 6645323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6644206-6645323:-1:exon

LOC120251189
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 55577
gene: LOC120251189
product: 50S ribosomal protein L7/L12-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_039259727.1
SIO_010081: LOC120251189
subclass of: SO_0000673
so part of: LOC120251189
location: complement(join(6644206..6644469,6644564..6645323))
location: region:6644206-6645323:-1
so has part: feature:6644564-6645323:-1:exon
so has part: feature:6644206-6644469:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6644564-6645323:-1:exon

position:6644564:-1
position: 6644564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6644206-6644469:-1:exon

position:6644469:-1
position: 6644469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120251189
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 55577
gene: LOC120251189
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 50S ribosomal protein L7/L12-like
translation: MNPLFRCGHRLLRPIPSTAAIRISGCFYSQPTAARKEEEHEIFDQRKLPADYDPANFDPTDHRGPPTARVWRLVDEVSSLTLSEVTDLSSILASKLRMKEPPVIAVMNSGTGFAGGISPGGNEAGVTKEDKKQEKTVFELKLESFEVASKIKVIKEVRGFTDLGLKEAKELVEKTPVVIKGGVSKEEGQQIIEKMKAVGAKVVLE
SIO_010081: LOC120251189
subclass of: SO_0000673
so part of: LOC120251189
location: complement(6644626..6645243)
location: region:6644626-6645243:-1
so has part: feature:6644626-6645243:-1:exon

XP_039115661.1
type: Protein
SIO_000068: ncbiprotein

position:6644626:-1
position: 6644626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6645243:-1
position: 6645243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6644626-6645243:-1:exon

LOC120252453
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252453
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(6661631..6661769)
location: region:6661631-6661769:-1
so has part: feature:6661631-6661769:-1:exon
subclass of: SO_0000578

120252453
type: Gene
SIO_000068: ncbigene

position:6661631:-1
position: 6661631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6661769:-1
position: 6661769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6661631-6661769:-1:exon

LOC120252453
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252453
product: small nucleolar RNA Z247
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00321
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533986.1
SIO_010081: LOC120252453
subclass of: SO_0000673
so part of: LOC120252453
location: complement(6661631..6661769)
location: region:6661631-6661769:-1
so has part: feature:6661631-6661769:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6661631-6661769:-1:exon

LOC120251281
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120251281
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 6663382..6668065
location: region:6663382-6668065:1
so has part: feature:6663382-6668065:1:exon

120251281
type: Gene
SIO_000068: ncbigene

position:6663382:1
position: 6663382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6668065:1
position: 6668065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6663382-6668065:1:exon

LOC120251281
type: Exon
subclass of: SO_0000147
RO_0002162: 55577
gene: LOC120251281
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 74% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC120251281
subclass of: SO_0000673
so part of: LOC120251281
location: 6663382..6663515
location: region:6663382-6663515:1
so has part: feature:6663382-6663515:1:exon

position:6663515:1
position: 6663515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6663382-6663515:1:exon

LOC120251281
type: Exon
subclass of: SO_0000147
RO_0002162: 55577
gene: LOC120251281
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 74% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC120251281
subclass of: SO_0000673
so part of: LOC120251281
location: 6666537..6667081
location: region:6666537-6667081:1
so has part: feature:6666537-6667081:1:exon

position:6666537:1
position: 6666537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6667081:1
position: 6667081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6666537-6667081:1:exon

LOC120251281
type: Exon
subclass of: SO_0000147
RO_0002162: 55577
gene: LOC120251281
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 74% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC120251281
subclass of: SO_0000673
so part of: LOC120251281
location: 6667147..6667233
location: region:6667147-6667233:1
so has part: feature:6667147-6667233:1:exon

position:6667147:1
position: 6667147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6667233:1
position: 6667233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6667147-6667233:1:exon

LOC120251281
type: Exon
subclass of: SO_0000147
RO_0002162: 55577
gene: LOC120251281
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 74% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC120251281
subclass of: SO_0000673
so part of: LOC120251281
location: 6667315..6667371
location: region:6667315-6667371:1
so has part: feature:6667315-6667371:1:exon

position:6667315:1
position: 6667315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6667371:1
position: 6667371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6667315-6667371:1:exon

LOC120251281
type: Exon
subclass of: SO_0000147
RO_0002162: 55577
gene: LOC120251281
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 74% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC120251281
subclass of: SO_0000673
so part of: LOC120251281
location: 6667639..6667897
location: region:6667639-6667897:1
so has part: feature:6667639-6667897:1:exon

position:6667639:1
position: 6667639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6667897:1
position: 6667897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6667639-6667897:1:exon

LOC120251281
type: Exon
subclass of: SO_0000147
RO_0002162: 55577
gene: LOC120251281
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 74% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC120251281
subclass of: SO_0000673
so part of: LOC120251281
location: 6667959..6668065
location: region:6667959-6668065:1
so has part: feature:6667959-6668065:1:exon

position:6667959:1
position: 6667959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6667959-6668065:1:exon

LOC120252121
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252121
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(6692465..6692570)
location: region:6692465-6692570:-1
so has part: feature:6692465-6692570:-1:exon
subclass of: SO_0000578

120252121
type: Gene
SIO_000068: ncbigene

position:6692465:-1
position: 6692465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6692570:-1
position: 6692570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6692465-6692570:-1:exon

LOC120252121
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252121
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533668.1
SIO_010081: LOC120252121
subclass of: SO_0000673
so part of: LOC120252121
location: complement(6692465..6692570)
location: region:6692465-6692570:-1
so has part: feature:6692465-6692570:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6692465-6692570:-1:exon

LOC120252161
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252161
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 6734137..6734243
location: region:6734137-6734243:1
so has part: feature:6734137-6734243:1:exon
subclass of: SO_0000578

120252161
type: Gene
SIO_000068: ncbigene

position:6734137:1
position: 6734137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6734243:1
position: 6734243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6734137-6734243:1:exon

LOC120252161
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252161
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533706.1
SIO_010081: LOC120252161
subclass of: SO_0000673
so part of: LOC120252161
location: 6734137..6734243
location: region:6734137-6734243:1
so has part: feature:6734137-6734243:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6734137-6734243:1:exon

LOC120251799
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120251799
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6752855..6759731)
location: region:6752855-6759731:-1
so has part: feature:6752855-6759731:-1:exon
subclass of: SO_0000010

120251799
type: Gene
SIO_000068: ncbigene

position:6752855:-1
position: 6752855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6759731:-1
position: 6759731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6752855-6759731:-1:exon

LOC120251799
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 55577
gene: LOC120251799
product: CBL-interacting protein kinase 24-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 5 bases in 4 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 60 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_039260452.1
SIO_010081: LOC120251799
subclass of: SO_0000673
so part of: LOC120251799
location: complement(join(6752855..6753185,6753404..6753478,6753561..6753617,6754078..6754195,6755680..6755800,6755983..6756107,6757179..6757268,6757702..6757827,6758310..6758363,6758459..6758534,6758732..6758839,6758975..6759046,6759145..6759198,6759463..6759731))
location: region:6752855-6759731:-1
so has part: feature:6759463-6759731:-1:exon
so has part: feature:6759145-6759198:-1:exon
so has part: feature:6758975-6759046:-1:exon
so has part: feature:6758732-6758839:-1:exon
so has part: feature:6758459-6758534:-1:exon
so has part: feature:6758310-6758363:-1:exon
so has part: feature:6757702-6757827:-1:exon
so has part: feature:6757179-6757268:-1:exon
so has part: feature:6755983-6756107:-1:exon
so has part: feature:6755680-6755800:-1:exon
so has part: feature:6754078-6754195:-1:exon
so has part: feature:6753561-6753617:-1:exon
so has part: feature:6753404-6753478:-1:exon
so has part: feature:6752855-6753185:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6759463-6759731:-1:exon

position:6759463:-1
position: 6759463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6759145-6759198:-1:exon

position:6759145:-1
position: 6759145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6759198:-1
position: 6759198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6758975-6759046:-1:exon

position:6758975:-1
position: 6758975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6759046:-1
position: 6759046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6758732-6758839:-1:exon

position:6758732:-1
position: 6758732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6758839:-1
position: 6758839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6758459-6758534:-1:exon

position:6758459:-1
position: 6758459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6758534:-1
position: 6758534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6758310-6758363:-1:exon

position:6758310:-1
position: 6758310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6758363:-1
position: 6758363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6757702-6757827:-1:exon

position:6757702:-1
position: 6757702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6757827:-1
position: 6757827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6757179-6757268:-1:exon

position:6757179:-1
position: 6757179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6757268:-1
position: 6757268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6755983-6756107:-1:exon

position:6755983:-1
position: 6755983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6756107:-1
position: 6756107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6755680-6755800:-1:exon

position:6755680:-1
position: 6755680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6755800:-1
position: 6755800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6754078-6754195:-1:exon

position:6754078:-1
position: 6754078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6754195:-1
position: 6754195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:6753561-6753617:-1:exon

position:6753561:-1
position: 6753561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6753617:-1
position: 6753617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:6753404-6753478:-1:exon

position:6753404:-1
position: 6753404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6753478:-1
position: 6753478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:6752855-6753185:-1:exon

position:6753185:-1
position: 6753185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120251799
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 55577
gene: LOC120251799
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 5 bases in 4 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: CBL-interacting protein kinase 24-like
translation: MKKVGKYEVGRTIGEGTFSKVKFARNMDTGDTVAMKVLARTTILKHRMVNQEISIMKIVRHPNIVRLHEVLAGEMKIYIILEFVTGGELFDKIAQQGKLHENESRKYFQQLIDAVDYCHSKGVYHRDLKPENLLLDSRGNLKVSDFGLSALSQQGVDLLHTTCGTPNYLAPEVLSHQGYDGSAADIWSCGVILYVLMAGFLPFDEIDLPTLYRKINAAEFSYPSWFSADAKSLISRILDPNPKTRIRIEEIKESPLVQKNYVAVEHREEEEVNLDDVNAVFNDIKDQYVSDNEEDNDGRPLLMNAFEMITLSQGLNLSVLFDRRQDYVKRQTRFVSRKPAKSITSTIEMVAKSMGFKVHSRNYKMRLEGVSTNKTGQFVVVLEVFEVAPSLFMVDVRKAAGNTLEYHKFYKNLRSKLEDIIWKPAEATDSPTLTRTPTF
SIO_010081: LOC120251799
subclass of: SO_0000673
so part of: LOC120251799
location: complement(join(6753090..6753185,6753404..6753478,6753561..6753617,6754078..6754195,6755680..6755800,6755983..6756107,6757179..6757268,6757702..6757827,6758310..6758363,6758459..6758534,6758732..6758839,6758975..6759046,6759145..6759198,6759463..6759615))
location: region:6753090-6759615:-1
so has part: feature:6759463-6759615:-1:exon
so has part: feature:6759145-6759198:-1:exon
so has part: feature:6758975-6759046:-1:exon
so has part: feature:6758732-6758839:-1:exon
so has part: feature:6758459-6758534:-1:exon
so has part: feature:6758310-6758363:-1:exon
so has part: feature:6757702-6757827:-1:exon
so has part: feature:6757179-6757268:-1:exon
so has part: feature:6755983-6756107:-1:exon
so has part: feature:6755680-6755800:-1:exon
so has part: feature:6754078-6754195:-1:exon
so has part: feature:6753561-6753617:-1:exon
so has part: feature:6753404-6753478:-1:exon
so has part: feature:6753090-6753185:-1:exon

XP_039116386.1
type: Protein
SIO_000068: ncbiprotein

position:6753090:-1
position: 6753090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6759615:-1
position: 6759615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6759463-6759615:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6759145-6759198:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6758975-6759046:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6758732-6758839:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6758459-6758534:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6758310-6758363:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6757702-6757827:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6757179-6757268:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6755983-6756107:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6755680-6755800:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6754078-6754195:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6753561-6753617:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6753404-6753478:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6753090-6753185:-1:exon

LOC120251101
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120251101
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6790873..6802066
location: region:6790873-6802066:1
so has part: feature:6790873-6802066:1:exon
subclass of: SO_0000010

120251101
type: Gene
SIO_000068: ncbigene

position:6790873:1
position: 6790873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6802066:1
position: 6802066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6790873-6802066:1:exon

LOC120251101
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 55577
gene: LOC120251101
product: elongation factor G, mitochondrial-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_039259640.1
SIO_010081: LOC120251101
subclass of: SO_0000673
so part of: LOC120251101
location: join(6790873..6791313,6791859..6792080,6796372..6796493,6796588..6796738,6799179..6799251,6800005..6800141,6800232..6800320,6800438..6800504,6801469..6801507,6801605..6801665,6801758..6801867,6801957..6802066)
location: region:6790873-6802066:1
so has part: feature:6790873-6791313:1:exon
so has part: feature:6791859-6792080:1:exon
so has part: feature:6796372-6796493:1:exon
so has part: feature:6796588-6796738:1:exon
so has part: feature:6799179-6799251:1:exon
so has part: feature:6800005-6800141:1:exon
so has part: feature:6800232-6800320:1:exon
so has part: feature:6800438-6800504:1:exon
so has part: feature:6801469-6801507:1:exon
so has part: feature:6801605-6801665:1:exon
so has part: feature:6801758-6801867:1:exon
so has part: feature:6801957-6802066:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6790873-6791313:1:exon

position:6791313:1
position: 6791313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6791859-6792080:1:exon

position:6791859:1
position: 6791859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6792080:1
position: 6792080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6796372-6796493:1:exon

position:6796372:1
position: 6796372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6796493:1
position: 6796493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6796588-6796738:1:exon

position:6796588:1
position: 6796588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6796738:1
position: 6796738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6799179-6799251:1:exon

position:6799179:1
position: 6799179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6799251:1
position: 6799251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6800005-6800141:1:exon

position:6800005:1
position: 6800005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6800141:1
position: 6800141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6800232-6800320:1:exon

position:6800232:1
position: 6800232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6800320:1
position: 6800320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6800438-6800504:1:exon

position:6800438:1
position: 6800438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6800504:1
position: 6800504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6801469-6801507:1:exon

position:6801469:1
position: 6801469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6801507:1
position: 6801507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6801605-6801665:1:exon

position:6801605:1
position: 6801605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6801665:1
position: 6801665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6801758-6801867:1:exon

position:6801758:1
position: 6801758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6801867:1
position: 6801867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:6801957-6802066:1:exon

position:6801957:1
position: 6801957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120251101
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 55577
gene: LOC120251101
product: elongation factor G, mitochondrial-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_039259641.1
SIO_010081: LOC120251101
subclass of: SO_0000673
so part of: LOC120251101
location: join(6790873..6791313,6791859..6792080,6796372..6796493,6796588..6796738,6799179..6799251,6800005..6800141,6800232..6800320,6800438..6800504,6801469..6801507,6801605..6801665,6801758..6801886,6801957..6802040)
location: region:6790873-6802040:1
so has part: feature:6790873-6791313:1:exon
so has part: feature:6791859-6792080:1:exon
so has part: feature:6796372-6796493:1:exon
so has part: feature:6796588-6796738:1:exon
so has part: feature:6799179-6799251:1:exon
so has part: feature:6800005-6800141:1:exon
so has part: feature:6800232-6800320:1:exon
so has part: feature:6800438-6800504:1:exon
so has part: feature:6801469-6801507:1:exon
so has part: feature:6801605-6801665:1:exon
so has part: feature:6801758-6801886:1:exon
so has part: feature:6801957-6802040:1:exon

position:6802040:1
position: 6802040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6790873-6791313:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6791859-6792080:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6796372-6796493:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6796588-6796738:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6799179-6799251:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6800005-6800141:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6800232-6800320:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6800438-6800504:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6801469-6801507:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6801605-6801665:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6801758-6801886:1:exon

position:6801886:1
position: 6801886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:6801957-6802040:1:exon

LOC120251101
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 55577
gene: LOC120251101
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: elongation factor G, mitochondrial-like isoform X1
translation: MARSSATRRLLSSIRSKTNTVSLLIFDGGAMPPSAGGRRAMSTAARAKEDNEAWWKESLERMRNIGISAHIDSGKTTLTERVLFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATYCTWNGYQINIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLNQARSKLRHHSAAVQIPIGLEEEFQGLVDLVELKSYYFHGANGENVVASDIPSNLEASAVEKRRELIEVVSEVDDQLAEIFLNDEPMSPRDLKMAIRRATIARKFVPVLYGKRIQKQDVLYMLTAYNLSLQGVQPLLDGVLDYLPCPTEVENHALDQNNSEERVLLSGTPAGSLVALAFKLEEGRFGQLTYLRIYEGVIKKGEYIVNINTGKKIKVPRLVRMHSNEMEDIQEAYAGQIVAVFGVDCASGDTFTNGSVRYTMTSMNVPEPVMSLAVSPVSKDSGGQFSKALNRFTKEDPTFRVGLDAESGQVCYV
SIO_010081: LOC120251101
subclass of: SO_0000673
so part of: LOC120251101
location: join(6790921..6791313,6791859..6792080,6796372..6796493,6796588..6796738,6799179..6799251,6800005..6800141,6800232..6800320,6800438..6800504,6801469..6801507,6801605..6801665,6801758..6801867,6801957..6802046)
location: region:6790921-6802046:1
so has part: feature:6790921-6791313:1:exon
so has part: feature:6791859-6792080:1:exon
so has part: feature:6796372-6796493:1:exon
so has part: feature:6796588-6796738:1:exon
so has part: feature:6799179-6799251:1:exon
so has part: feature:6800005-6800141:1:exon
so has part: feature:6800232-6800320:1:exon
so has part: feature:6800438-6800504:1:exon
so has part: feature:6801469-6801507:1:exon
so has part: feature:6801605-6801665:1:exon
so has part: feature:6801758-6801867:1:exon
so has part: feature:6801957-6802046:1:exon

XP_039115574.1
type: Protein
SIO_000068: ncbiprotein

position:6790921:1
position: 6790921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6802046:1
position: 6802046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6790921-6791313:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6791859-6792080:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6796372-6796493:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6796588-6796738:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6799179-6799251:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6800005-6800141:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6800232-6800320:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6800438-6800504:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6801469-6801507:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6801605-6801665:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6801758-6801867:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6801957-6802046:1:exon

LOC120251101
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 55577
gene: LOC120251101
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: elongation factor G, mitochondrial-like isoform X2
translation: MARSSATRRLLSSIRSKTNTVSLLIFDGGAMPPSAGGRRAMSTAARAKEDNEAWWKESLERMRNIGISAHIDSGKTTLTERVLFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATYCTWNGYQINIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLNQARSKLRHHSAAVQIPIGLEEEFQGLVDLVELKSYYFHGANGENVVASDIPSNLEASAVEKRRELIEVVSEVDDQLAEIFLNDEPMSPRDLKMAIRRATIARKFVPVLYGKRIQKQDVLYMLTAYNLSLQGVQPLLDGVLDYLPCPTEVENHALDQNNSEERVLLSGTPAGSLVALAFKLEEGRFGQLTYLRIYEGVIKKGEYIVNINTGKKIKVPRLVRMHSNEMEDIQEAYAGQIVAVFGVDCASGDTFTNGSVRYTMTSMNVPEPVMSLAVSPVSKDSGGQVNLS
SIO_010081: LOC120251101
subclass of: SO_0000673
so part of: LOC120251101
location: join(6790921..6791313,6791859..6792080,6796372..6796493,6796588..6796738,6799179..6799251,6800005..6800141,6800232..6800320,6800438..6800504,6801469..6801507,6801605..6801665,6801758..6801882)
location: region:6790921-6801882:1
so has part: feature:6790921-6791313:1:exon
so has part: feature:6791859-6792080:1:exon
so has part: feature:6796372-6796493:1:exon
so has part: feature:6796588-6796738:1:exon
so has part: feature:6799179-6799251:1:exon
so has part: feature:6800005-6800141:1:exon
so has part: feature:6800232-6800320:1:exon
so has part: feature:6800438-6800504:1:exon
so has part: feature:6801469-6801507:1:exon
so has part: feature:6801605-6801665:1:exon
so has part: feature:6801758-6801882:1:exon

XP_039115575.1
type: Protein
SIO_000068: ncbiprotein

position:6801882:1
position: 6801882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6790921-6791313:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6791859-6792080:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6796372-6796493:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6796588-6796738:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6799179-6799251:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6800005-6800141:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6800232-6800320:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6800438-6800504:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6801469-6801507:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6801605-6801665:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6801758-6801882:1:exon

LOC120252233
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252233
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 6817813..6817919
location: region:6817813-6817919:1
so has part: feature:6817813-6817919:1:exon
subclass of: SO_0000578

120252233
type: Gene
SIO_000068: ncbigene

position:6817813:1
position: 6817813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6817919:1
position: 6817919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6817813-6817919:1:exon

LOC120252233
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252233
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533777.1
SIO_010081: LOC120252233
subclass of: SO_0000673
so part of: LOC120252233
location: 6817813..6817919
location: region:6817813-6817919:1
so has part: feature:6817813-6817919:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6817813-6817919:1:exon

LOC120252389
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252389
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 6862564..6862670
location: region:6862564-6862670:1
so has part: feature:6862564-6862670:1:exon
subclass of: SO_0000578

120252389
type: Gene
SIO_000068: ncbigene

position:6862564:1
position: 6862564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6862670:1
position: 6862670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6862564-6862670:1:exon

LOC120252389
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252389
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533922.1
SIO_010081: LOC120252389
subclass of: SO_0000673
so part of: LOC120252389
location: 6862564..6862670
location: region:6862564-6862670:1
so has part: feature:6862564-6862670:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6862564-6862670:1:exon

LOC120251509
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120251509
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6897912..6903178
location: region:6897912-6903178:1
so has part: feature:6897912-6903178:1:exon
subclass of: SO_0000010

120251509
type: Gene
SIO_000068: ncbigene

position:6897912:1
position: 6897912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6903178:1
position: 6903178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6897912-6903178:1:exon

LOC120251509
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 55577
gene: LOC120251509
product: protein CHUP1, chloroplastic-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_039260048.1
SIO_010081: LOC120251509
subclass of: SO_0000673
so part of: LOC120251509
location: join(6897912..6898422,6898565..6898635,6898773..6899552,6899766..6900578,6900625..6901168,6901314..6901445,6902077..6902258,6902367..6902478,6902658..6902804,6902892..6903178)
location: region:6897912-6903178:1
so has part: feature:6897912-6898422:1:exon
so has part: feature:6898565-6898635:1:exon
so has part: feature:6898773-6899552:1:exon
so has part: feature:6899766-6900578:1:exon
so has part: feature:6900625-6901168:1:exon
so has part: feature:6901314-6901445:1:exon
so has part: feature:6902077-6902258:1:exon
so has part: feature:6902367-6902478:1:exon
so has part: feature:6902658-6902804:1:exon
so has part: feature:6902892-6903178:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6897912-6898422:1:exon

position:6898422:1
position: 6898422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6898565-6898635:1:exon

position:6898565:1
position: 6898565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6898635:1
position: 6898635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6898773-6899552:1:exon

position:6898773:1
position: 6898773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6899552:1
position: 6899552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6899766-6900578:1:exon

position:6899766:1
position: 6899766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6900578:1
position: 6900578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6900625-6901168:1:exon

position:6900625:1
position: 6900625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6901168:1
position: 6901168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6901314-6901445:1:exon

position:6901314:1
position: 6901314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6901445:1
position: 6901445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6902077-6902258:1:exon

position:6902077:1
position: 6902077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6902258:1
position: 6902258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6902367-6902478:1:exon

position:6902367:1
position: 6902367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6902478:1
position: 6902478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6902658-6902804:1:exon

position:6902658:1
position: 6902658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6902804:1
position: 6902804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6902892-6903178:1:exon

position:6902892:1
position: 6902892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120251509
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 55577
gene: LOC120251509
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: protein CHUP1, chloroplastic-like
translation: MIVRLGFLVAASIGAYAVRQVNCSRRRFKPNDNGESTPKPNWIEESQKEADEVYDWQVEKEEEEEEEKVKTISSVINSAELMKRLCPTSLENDDDDMLPEFENLLSGEVEAPLPSDKFDMKPTSEYDIEMANNAYELERLRNLVNELQEREVKLEGELLEYYGLKEQESDVAELQKQLKIKIVEIDMLNITINSLQAERKKLQEEVAQGIAAKKELDLVRNKLKDLQRQIQLEANQTKGHLLLLKQQVTSLKTKEEEASKRDAEVERKLKALMELEVEVVELRRKNKELQIEKRELTVKLDAAQVRVEQLSEMTETEMVARAREEVSKLRHSNEDLTKQVEGLQMNRFSEVEELVYLRWVNACLRYELRNFQKPSGTISARDLNKSLSPKSRERAKRLMLEYAGSERGQGDTDLESVASMPSSPGSTEDFDNASMDSSSSRFSSLSKKPSLIQKLKKWGKSKDDYYTGASASPTRSLGGASSPMRTSMSYKPSSSSSSAKGPLEALMLRNAGDAMAITTFGTKEQPVSPNTTVEASFNLISKSVEGVAEDKYPVYKDRHKLALEREKAIKERAEKARAQRFGGDAASIILPPKLAQIKERANNVPAATGDNVNQQNSNEGLDHHPEQVMSKIKLGHIEKRAPRVPRPPPKPSGGDNTRSDSKSTTTTASAGDGVPPPPPPPPPPRPPLPTGAPPPPPPPAAGLIIKGQASGDKVQRAPEVVEFYQTLMKREAKKETTLLLPSSASSAADIRSSMLGEIENRSAFLLAVKADVETQGDFVQSLAAEVRAASFTNIEDLVSFVNWLDEELSFLVDERAVLKHFDWPEGKADALREAAFEYQDLIKLEEQVSNFVDDMKLSCEAALKKMYSLLEKVEHSVYALLRTRDMAISRYREYGIPTNWLLDNGVVGKIKLASIQLAKKYMMRVASELDAQSTASEKEPNREFYLLQGVRFAFRVHQFAGGFDAESMQVFEDLRNRVKTQTTEYEKTEA
SIO_010081: LOC120251509
subclass of: SO_0000673
so part of: LOC120251509
location: join(6898329..6898422,6898565..6898635,6898773..6899552,6899766..6900578,6900625..6901168,6901314..6901445,6902077..6902258,6902367..6902478,6902658..6902804,6902892..6902990)
location: region:6898329-6902990:1
so has part: feature:6898329-6898422:1:exon
so has part: feature:6898565-6898635:1:exon
so has part: feature:6898773-6899552:1:exon
so has part: feature:6899766-6900578:1:exon
so has part: feature:6900625-6901168:1:exon
so has part: feature:6901314-6901445:1:exon
so has part: feature:6902077-6902258:1:exon
so has part: feature:6902367-6902478:1:exon
so has part: feature:6902658-6902804:1:exon
so has part: feature:6902892-6902990:1:exon

XP_039115982.1
type: Protein
SIO_000068: ncbiprotein

position:6898329:1
position: 6898329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6902990:1
position: 6902990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6898329-6898422:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6898565-6898635:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6898773-6899552:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6899766-6900578:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6900625-6901168:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6901314-6901445:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6902077-6902258:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6902367-6902478:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6902658-6902804:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6902892-6902990:1:exon

LOC120252123
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252123
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 6911010..6911116
location: region:6911010-6911116:1
so has part: feature:6911010-6911116:1:exon
subclass of: SO_0000578

120252123
type: Gene
SIO_000068: ncbigene

position:6911010:1
position: 6911010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6911116:1
position: 6911116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6911010-6911116:1:exon

LOC120252123
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252123
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533670.1
SIO_010081: LOC120252123
subclass of: SO_0000673
so part of: LOC120252123
location: 6911010..6911116
location: region:6911010-6911116:1
so has part: feature:6911010-6911116:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6911010-6911116:1:exon

LOC120252058
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252058
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(6928972..6929078)
location: region:6928972-6929078:-1
so has part: feature:6928972-6929078:-1:exon
subclass of: SO_0000578

120252058
type: Gene
SIO_000068: ncbigene

position:6928972:-1
position: 6928972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6929078:-1
position: 6929078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6928972-6929078:-1:exon

LOC120252058
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252058
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533610.1
SIO_010081: LOC120252058
subclass of: SO_0000673
so part of: LOC120252058
location: complement(6928972..6929078)
location: region:6928972-6929078:-1
so has part: feature:6928972-6929078:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6928972-6929078:-1:exon

LOC120252069
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252069
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 7161536..7161642
location: region:7161536-7161642:1
so has part: feature:7161536-7161642:1:exon
subclass of: SO_0000578

120252069
type: Gene
SIO_000068: ncbigene

position:7161536:1
position: 7161536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7161642:1
position: 7161642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7161536-7161642:1:exon

LOC120252069
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252069
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533620.1
SIO_010081: LOC120252069
subclass of: SO_0000673
so part of: LOC120252069
location: 7161536..7161642
location: region:7161536-7161642:1
so has part: feature:7161536-7161642:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7161536-7161642:1:exon

LOC120251282
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120251282
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7199497..7201398)
location: region:7199497-7201398:-1
so has part: feature:7199497-7201398:-1:exon
subclass of: SO_0000010

120251282
type: Gene
SIO_000068: ncbigene

position:7199497:-1
position: 7199497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7201398:-1
position: 7201398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7199497-7201398:-1:exon

LOC120251282
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 55577
gene: LOC120251282
product: uncharacterized mitochondrial protein AtMg00860-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_039259839.1
SIO_010081: LOC120251282
subclass of: SO_0000673
so part of: LOC120251282
location: complement(join(7199497..7199574,7199698..7200044,7201299..7201398))
location: region:7199497-7201398:-1
so has part: feature:7201299-7201398:-1:exon
so has part: feature:7199698-7200044:-1:exon
so has part: feature:7199497-7199574:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7201299-7201398:-1:exon

position:7201299:-1
position: 7201299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7199698-7200044:-1:exon

position:7199698:-1
position: 7199698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7200044:-1
position: 7200044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7199497-7199574:-1:exon

position:7199574:-1
position: 7199574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120251282
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 55577
gene: LOC120251282
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized mitochondrial protein AtMg00860-like
translation: MGKRVMQVKEEDNTTDLCPPVFDEDGLNEEKVEGEGIQVEEAKIKVVKQWLTSTNITKVRSFHSLASFYRRLISYFSSIMALFTKYMKGNKFAWTDEVDDTFHLMKERLATAPILALLDFTHMFELYIDASKVEIGAVLSQQVGPIAFHITVLYGIYINKTRYLLTQLVGKLSG
SIO_010081: LOC120251282
subclass of: SO_0000673
so part of: LOC120251282
location: complement(join(7199497..7199574,7199698..7200044,7201299..7201398))
location: region:7199497-7201398:-1
so has part: feature:7201299-7201398:-1:exon
so has part: feature:7199698-7200044:-1:exon
so has part: feature:7199497-7199574:-1:exon

XP_039115773.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7201299-7201398:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7199698-7200044:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7199497-7199574:-1:exon

LOC120251284
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120251284
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7210469..7219333)
location: region:7210469-7219333:-1
so has part: feature:7210469-7219333:-1:exon
subclass of: SO_0000010

120251284
type: Gene
SIO_000068: ncbigene

position:7210469:-1
position: 7210469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7219333:-1
position: 7219333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7210469-7219333:-1:exon

LOC120251284
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 55577
gene: LOC120251284
product: telomerase Cajal body protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 78% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_039259840.1
SIO_010081: LOC120251284
subclass of: SO_0000673
so part of: LOC120251284
location: complement(join(7210469..7210526,7210884..7210964,7211555..7211651,7214645..7214748,7215621..7215703,7215771..7215844,7215941..7216021,7216095..7216141,7216227..7216511,7218259..7218422,7219233..7219333))
location: region:7210469-7219333:-1
so has part: feature:7219233-7219333:-1:exon
so has part: feature:7218259-7218422:-1:exon
so has part: feature:7216227-7216511:-1:exon
so has part: feature:7216095-7216141:-1:exon
so has part: feature:7215941-7216021:-1:exon
so has part: feature:7215771-7215844:-1:exon
so has part: feature:7215621-7215703:-1:exon
so has part: feature:7214645-7214748:-1:exon
so has part: feature:7211555-7211651:-1:exon
so has part: feature:7210884-7210964:-1:exon
so has part: feature:7210469-7210526:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7219233-7219333:-1:exon

position:7219233:-1
position: 7219233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7218259-7218422:-1:exon

position:7218259:-1
position: 7218259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7218422:-1
position: 7218422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7216227-7216511:-1:exon

position:7216227:-1
position: 7216227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7216511:-1
position: 7216511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7216095-7216141:-1:exon

position:7216095:-1
position: 7216095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7216141:-1
position: 7216141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7215941-7216021:-1:exon

position:7215941:-1
position: 7215941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7216021:-1
position: 7216021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7215771-7215844:-1:exon

position:7215771:-1
position: 7215771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7215844:-1
position: 7215844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7215621-7215703:-1:exon

position:7215621:-1
position: 7215621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7215703:-1
position: 7215703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7214645-7214748:-1:exon

position:7214645:-1
position: 7214645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7214748:-1
position: 7214748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7211555-7211651:-1:exon

position:7211555:-1
position: 7211555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7211651:-1
position: 7211651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7210884-7210964:-1:exon

position:7210884:-1
position: 7210884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7210964:-1
position: 7210964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7210469-7210526:-1:exon

position:7210526:-1
position: 7210526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120251284
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 55577
gene: LOC120251284
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: telomerase Cajal body protein 1
translation: MTVDRREEEQDPSQQSTDATAVWPFLRFDSPPRKIYHFFQQFRNGVENPSNYNNFLKGVKWSPDGTCFLTSCDDNTVQLFHLPEEASYIDQLASDYQDSYHSSLVINEAEMVYDYCWYPYMCSSDPTSSVFVATTRDHPIHLWDATSGQLRCTYRAYNEMDEITAALSVSFSSSGTKLFAGYNKMLRVFDVHRPGRDFQQFSLHKGKDGPSAFIKRKCHGLIAISSFILNEKGFLLLRFYDLNLPNVNLYGGRPNITPLPKRHHVLKVESRCGFLLVTFEKGYVALPSR
SIO_010081: LOC120251284
subclass of: SO_0000673
so part of: LOC120251284
location: complement(join(7210469..7210526,7210884..7210964,7211555..7211651,7214645..7214748,7215621..7215703,7215771..7215844,7215941..7216021,7216095..7216141,7216227..7216471))
location: region:7210469-7216471:-1
so has part: feature:7216227-7216471:-1:exon
so has part: feature:7216095-7216141:-1:exon
so has part: feature:7215941-7216021:-1:exon
so has part: feature:7215771-7215844:-1:exon
so has part: feature:7215621-7215703:-1:exon
so has part: feature:7214645-7214748:-1:exon
so has part: feature:7211555-7211651:-1:exon
so has part: feature:7210884-7210964:-1:exon
so has part: feature:7210469-7210526:-1:exon

XP_039115774.1
type: Protein
SIO_000068: ncbiprotein

position:7216471:-1
position: 7216471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7216227-7216471:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7216095-7216141:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7215941-7216021:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7215771-7215844:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7215621-7215703:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7214645-7214748:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7211555-7211651:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7210884-7210964:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7210469-7210526:-1:exon

LOC120252265
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252265
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 7242024..7242130
location: region:7242024-7242130:1
so has part: feature:7242024-7242130:1:exon
subclass of: SO_0000578

120252265
type: Gene
SIO_000068: ncbigene

position:7242024:1
position: 7242024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7242130:1
position: 7242130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7242024-7242130:1:exon

LOC120252265
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252265
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533809.1
SIO_010081: LOC120252265
subclass of: SO_0000673
so part of: LOC120252265
location: 7242024..7242130
location: region:7242024-7242130:1
so has part: feature:7242024-7242130:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7242024-7242130:1:exon

LOC120252272
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252272
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 7271436..7271541
location: region:7271436-7271541:1
so has part: feature:7271436-7271541:1:exon
subclass of: SO_0000578

120252272
type: Gene
SIO_000068: ncbigene

position:7271436:1
position: 7271436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7271541:1
position: 7271541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7271436-7271541:1:exon

LOC120252272
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252272
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533816.1
SIO_010081: LOC120252272
subclass of: SO_0000673
so part of: LOC120252272
location: 7271436..7271541
location: region:7271436-7271541:1
so has part: feature:7271436-7271541:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7271436-7271541:1:exon

LOC120252436
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252436
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(7297302..7297409)
location: region:7297302-7297409:-1
so has part: feature:7297302-7297409:-1:exon
subclass of: SO_0000578

120252436
type: Gene
SIO_000068: ncbigene

position:7297302:-1
position: 7297302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7297409:-1
position: 7297409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7297302-7297409:-1:exon

LOC120252436
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252436
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533965.1
SIO_010081: LOC120252436
subclass of: SO_0000673
so part of: LOC120252436
location: complement(7297302..7297409)
location: region:7297302-7297409:-1
so has part: feature:7297302-7297409:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7297302-7297409:-1:exon

LOC120251804
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120251804
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7343340..7344924)
location: region:7343340-7344924:-1
so has part: feature:7343340-7344924:-1:exon
subclass of: SO_0000010

120251804
type: Gene
SIO_000068: ncbigene

position:7343340:-1
position: 7343340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7344924:-1
position: 7344924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7343340-7344924:-1:exon

LOC120251804
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 55577
gene: LOC120251804
product: uncharacterized LOC120251804
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_039260458.1
SIO_010081: LOC120251804
subclass of: SO_0000673
so part of: LOC120251804
location: complement(join(7343340..7343645,7344526..7344924))
location: region:7343340-7344924:-1
so has part: feature:7344526-7344924:-1:exon
so has part: feature:7343340-7343645:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7344526-7344924:-1:exon

position:7344526:-1
position: 7344526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7343340-7343645:-1:exon

position:7343645:-1
position: 7343645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120251804
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 55577
gene: LOC120251804
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC120251804
translation: MILLSISPFVSIFPQPSPLSPLLALICPSRTPLGGLLFRKPSSCPDSPPLPQSLLSIQAPVWLPALLSVVRRLPDFYLEHSLLCVQEAQTRSENKVMSRFNK
SIO_010081: LOC120251804
subclass of: SO_0000673
so part of: LOC120251804
location: complement(join(7343622..7343645,7344526..7344810))
location: region:7343622-7344810:-1
so has part: feature:7344526-7344810:-1:exon
so has part: feature:7343622-7343645:-1:exon

XP_039116392.1
type: Protein
SIO_000068: ncbiprotein

position:7343622:-1
position: 7343622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7344810:-1
position: 7344810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7344526-7344810:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7343622-7343645:-1:exon

LOC120251285
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120251285
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7361521..7363518)
location: region:7361521-7363518:-1
so has part: feature:7361521-7363518:-1:exon
subclass of: SO_0000010

120251285
type: Gene
SIO_000068: ncbigene

position:7361521:-1
position: 7361521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7363518:-1
position: 7363518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7361521-7363518:-1:exon

LOC120251285
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 55577
gene: LOC120251285
product: probable transmembrane ascorbate ferrireductase 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_039259841.1
SIO_010081: LOC120251285
subclass of: SO_0000673
so part of: LOC120251285
location: complement(join(7361521..7361934,7362870..7363069,7363168..7363219,7363293..7363518))
location: region:7361521-7363518:-1
so has part: feature:7363293-7363518:-1:exon
so has part: feature:7363168-7363219:-1:exon
so has part: feature:7362870-7363069:-1:exon
so has part: feature:7361521-7361934:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7363293-7363518:-1:exon

position:7363293:-1
position: 7363293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7363168-7363219:-1:exon

position:7363168:-1
position: 7363168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7363219:-1
position: 7363219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7362870-7363069:-1:exon

position:7362870:-1
position: 7362870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7363069:-1
position: 7363069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7361521-7361934:-1:exon

position:7361934:-1
position: 7361934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120251285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 55577
gene: LOC120251285
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable transmembrane ascorbate ferrireductase 4
translation: MAASLLTLARLSALAVTILLLIWSIGFRSSFLHLSSTSSSLPTAHLDHLFSVLHPLLMVMGFILLSGEAILAHRWMRRWSRGARKSMHLAMQGAALGFGVLGIWAKFKGNVGIMNNFYSLHSLMGLACLFLFSAQWIAGFMSFWHHSEGRRTRIIVLPWHVFVGLYTYILAVATAETGLLEKLTFLQTKHGMPRRSAEATLVNCLGFGLVLLGSFVVFSAITPKHHLHAQHLASNKNTNSGNLYSFDNKNGYHSSHQSSKVMSFDSDFDNEK
SIO_010081: LOC120251285
subclass of: SO_0000673
so part of: LOC120251285
location: complement(join(7361521..7361934,7362870..7363069,7363168..7363219,7363293..7363445))
location: region:7361521-7363445:-1
so has part: feature:7363293-7363445:-1:exon
so has part: feature:7363168-7363219:-1:exon
so has part: feature:7362870-7363069:-1:exon
so has part: feature:7361521-7361934:-1:exon

XP_039115775.1
type: Protein
SIO_000068: ncbiprotein

position:7363445:-1
position: 7363445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7363293-7363445:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7363168-7363219:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7362870-7363069:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7361521-7361934:-1:exon

LOC120252316
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252316
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 7410235..7410340
location: region:7410235-7410340:1
so has part: feature:7410235-7410340:1:exon
subclass of: SO_0000578

120252316
type: Gene
SIO_000068: ncbigene

position:7410235:1
position: 7410235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7410340:1
position: 7410340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7410235-7410340:1:exon

LOC120252316
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252316
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533857.1
SIO_010081: LOC120252316
subclass of: SO_0000673
so part of: LOC120252316
location: 7410235..7410340
location: region:7410235-7410340:1
so has part: feature:7410235-7410340:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7410235-7410340:1:exon

LOC120252224
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252224
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(7421874..7421980)
location: region:7421874-7421980:-1
so has part: feature:7421874-7421980:-1:exon
subclass of: SO_0000578

120252224
type: Gene
SIO_000068: ncbigene

position:7421874:-1
position: 7421874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7421980:-1
position: 7421980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7421874-7421980:-1:exon

LOC120252224
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252224
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533766.1
SIO_010081: LOC120252224
subclass of: SO_0000673
so part of: LOC120252224
location: complement(7421874..7421980)
location: region:7421874-7421980:-1
so has part: feature:7421874-7421980:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7421874-7421980:-1:exon

LOC120252312
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252312
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(7451170..7451276)
location: region:7451170-7451276:-1
so has part: feature:7451170-7451276:-1:exon
subclass of: SO_0000578

120252312
type: Gene
SIO_000068: ncbigene

position:7451170:-1
position: 7451170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7451276:-1
position: 7451276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7451170-7451276:-1:exon

LOC120252312
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252312
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533853.1
SIO_010081: LOC120252312
subclass of: SO_0000673
so part of: LOC120252312
location: complement(7451170..7451276)
location: region:7451170-7451276:-1
so has part: feature:7451170-7451276:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7451170-7451276:-1:exon

LOC120252460
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252460
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 7478997..7479103
location: region:7478997-7479103:1
so has part: feature:7478997-7479103:1:exon
subclass of: SO_0000578

120252460
type: Gene
SIO_000068: ncbigene

position:7478997:1
position: 7478997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7479103:1
position: 7479103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7478997-7479103:1:exon

LOC120252460
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252460
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533994.1
SIO_010081: LOC120252460
subclass of: SO_0000673
so part of: LOC120252460
location: 7478997..7479103
location: region:7478997-7479103:1
so has part: feature:7478997-7479103:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7478997-7479103:1:exon

LOC120251711
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120251711
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7632473..7636471
location: region:7632473-7636471:1
so has part: feature:7632473-7636471:1:exon
subclass of: SO_0000010

120251711
type: Gene
SIO_000068: ncbigene

position:7632473:1
position: 7632473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7636471:1
position: 7636471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7632473-7636471:1:exon

LOC120251711
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 55577
gene: LOC120251711
product: 5'-deoxynucleotidase hdd1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_039260347.1
SIO_010081: LOC120251711
subclass of: SO_0000673
so part of: LOC120251711
location: join(7632473..7632598,7635688..7635805,7635887..7636011,7636107..7636144,7636254..7636471)
location: region:7632473-7636471:1
so has part: feature:7632473-7632598:1:exon
so has part: feature:7635688-7635805:1:exon
so has part: feature:7635887-7636011:1:exon
so has part: feature:7636107-7636144:1:exon
so has part: feature:7636254-7636471:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7632473-7632598:1:exon

position:7632598:1
position: 7632598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7635688-7635805:1:exon

position:7635688:1
position: 7635688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7635805:1
position: 7635805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7635887-7636011:1:exon

position:7635887:1
position: 7635887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7636011:1
position: 7636011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7636107-7636144:1:exon

position:7636107:1
position: 7636107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7636144:1
position: 7636144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7636254-7636471:1:exon

position:7636254:1
position: 7636254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120251711
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 55577
gene: LOC120251711
product: 5'-deoxynucleotidase hdd1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_039260346.1
SIO_010081: LOC120251711
subclass of: SO_0000673
so part of: LOC120251711
location: join(7632479..7632604,7635688..7635805,7635887..7636011,7636107..7636144,7636254..7636470)
location: region:7632479-7636470:1
so has part: feature:7632479-7632604:1:exon
so has part: feature:7635688-7635805:1:exon
so has part: feature:7635887-7636011:1:exon
so has part: feature:7636107-7636144:1:exon
so has part: feature:7636254-7636470:1:exon

position:7632479:1
position: 7632479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7636470:1
position: 7636470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7632479-7632604:1:exon

position:7632604:1
position: 7632604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7635688-7635805:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7635887-7636011:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7636107-7636144:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7636254-7636470:1:exon

LOC120251711
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 55577
gene: LOC120251711
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 5'-deoxynucleotidase hdd1-like
translation: MFPSSSSGVSPSSVVDFLALCRNLKTTKRTGWVRRGVCGPESVADHMYRMGIMALIAPDIPGINRDRCVKMAIVHDIAEAIVGDITPFDGVSKSEKSRMEKEALDHMCKLLGGESRGEIYRQTCKTID
SIO_010081: LOC120251711
subclass of: SO_0000673
so part of: LOC120251711
location: join(7635731..7635805,7635887..7636011,7636107..7636144,7636254..7636402)
location: region:7635731-7636402:1
so has part: feature:7635731-7635805:1:exon
so has part: feature:7635887-7636011:1:exon
so has part: feature:7636107-7636144:1:exon
so has part: feature:7636254-7636402:1:exon

XP_039116280.1
type: Protein
SIO_000068: ncbiprotein

position:7635731:1
position: 7635731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7636402:1
position: 7636402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7635731-7635805:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7635887-7636011:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7636107-7636144:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7636254-7636402:1:exon

LOC120251711
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 55577
gene: LOC120251711
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 5'-deoxynucleotidase hdd1-like
translation: MFPSSSSGVSPSSVVDFLALCRNLKTTKRTGWVRRGVCGPESVADHMYRMGIMALIAPDIPGINRDRCVKMAIVHDIAEAIVGDITPFDGVSKSEKSRMEKEALDHMCKLLGGESRGEIYRQTCKTID
SIO_010081: LOC120251711
subclass of: SO_0000673
so part of: LOC120251711
location: join(7635731..7635805,7635887..7636011,7636107..7636144,7636254..7636402)
location: region:7635731-7636402:1
so has part: feature:7635731-7635805:1:exon
so has part: feature:7635887-7636011:1:exon
so has part: feature:7636107-7636144:1:exon
so has part: feature:7636254-7636402:1:exon

XP_039116281.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7635731-7635805:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7635887-7636011:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7636107-7636144:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7636254-7636402:1:exon

LOC120252287
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252287
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(7668876..7668982)
location: region:7668876-7668982:-1
so has part: feature:7668876-7668982:-1:exon
subclass of: SO_0000578

120252287
type: Gene
SIO_000068: ncbigene

position:7668876:-1
position: 7668876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7668982:-1
position: 7668982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7668876-7668982:-1:exon

LOC120252287
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252287
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533830.1
SIO_010081: LOC120252287
subclass of: SO_0000673
so part of: LOC120252287
location: complement(7668876..7668982)
location: region:7668876-7668982:-1
so has part: feature:7668876-7668982:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7668876-7668982:-1:exon

LOC120251904
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120251904
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(7674236..7676423)
location: region:7674236-7676423:-1
so has part: feature:7674236-7676423:-1:exon

120251904
type: Gene
SIO_000068: ncbigene

position:7674236:-1
position: 7674236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7676423:-1
position: 7676423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7674236-7676423:-1:exon

LOC120251904
type: Exon
subclass of: SO_0000147
RO_0002162: 55577
gene: LOC120251904
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 48% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC120251904
subclass of: SO_0000673
so part of: LOC120251904
location: complement(7674236..7675373)
location: region:7674236-7675373:-1
so has part: feature:7674236-7675373:-1:exon

position:7675373:-1
position: 7675373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7674236-7675373:-1:exon

LOC120251904
type: Exon
subclass of: SO_0000147
RO_0002162: 55577
gene: LOC120251904
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 48% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC120251904
subclass of: SO_0000673
so part of: LOC120251904
location: complement(7676151..7676423)
location: region:7676151-7676423:-1
so has part: feature:7676151-7676423:-1:exon

position:7676151:-1
position: 7676151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7676151-7676423:-1:exon

LOC120251286
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120251286
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7677636..7678491)
location: region:7677636-7678491:-1
so has part: feature:7677636-7678491:-1:exon
subclass of: SO_0000010

120251286
type: Gene
SIO_000068: ncbigene

position:7677636:-1
position: 7677636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7678491:-1
position: 7678491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7677636-7678491:-1:exon

LOC120251286
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 55577
gene: LOC120251286
product: uncharacterized LOC120251286
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_039259843.1
SIO_010081: LOC120251286
subclass of: SO_0000673
so part of: LOC120251286
location: complement(join(7677636..7677714,7677825..7677991,7678096..7678239,7678363..7678491))
location: region:7677636-7678491:-1
so has part: feature:7678363-7678491:-1:exon
so has part: feature:7678096-7678239:-1:exon
so has part: feature:7677825-7677991:-1:exon
so has part: feature:7677636-7677714:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7678363-7678491:-1:exon

position:7678363:-1
position: 7678363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7678096-7678239:-1:exon

position:7678096:-1
position: 7678096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7678239:-1
position: 7678239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7677825-7677991:-1:exon

position:7677825:-1
position: 7677825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7677991:-1
position: 7677991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7677636-7677714:-1:exon

position:7677714:-1
position: 7677714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120251286
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 55577
gene: LOC120251286
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC120251286
translation: MVMDVVGNVHDEGTNPNQQGVALSLIDRMERFEFVFILFLMNKDELLANVSKFCVENDIEMPNNMEERLLVCGLPRREKQATTYLHYYRVEVLDMIMQDMNSHFSKSTIELLSCISCLDPKLVRIAELYLENFSELDRMALVDQLEIYPLVSRLIELALVLLVSTASVERDF
SIO_010081: LOC120251286
subclass of: SO_0000673
so part of: LOC120251286
location: complement(join(7677636..7677714,7677825..7677991,7678096..7678239,7678363..7678491))
location: region:7677636-7678491:-1
so has part: feature:7678363-7678491:-1:exon
so has part: feature:7678096-7678239:-1:exon
so has part: feature:7677825-7677991:-1:exon
so has part: feature:7677636-7677714:-1:exon

XP_039115777.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7678363-7678491:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7678096-7678239:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7677825-7677991:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7677636-7677714:-1:exon

LOC120251287
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120251287
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7678579..7679523)
location: region:7678579-7679523:-1
so has part: feature:7678579-7679523:-1:exon
subclass of: SO_0000010

120251287
type: Gene
SIO_000068: ncbigene

position:7678579:-1
position: 7678579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7679523:-1
position: 7679523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7678579-7679523:-1:exon

LOC120251287
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 55577
gene: LOC120251287
product: uncharacterized LOC120251287
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_039259844.1
SIO_010081: LOC120251287
subclass of: SO_0000673
so part of: LOC120251287
location: complement(join(7678579..7678705,7678790..7679114,7679256..7679523))
location: region:7678579-7679523:-1
so has part: feature:7679256-7679523:-1:exon
so has part: feature:7678790-7679114:-1:exon
so has part: feature:7678579-7678705:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7679256-7679523:-1:exon

position:7679256:-1
position: 7679256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7678790-7679114:-1:exon

position:7678790:-1
position: 7678790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7679114:-1
position: 7679114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7678579-7678705:-1:exon

position:7678705:-1
position: 7678705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC120251287
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 55577
gene: LOC120251287
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC120251287
translation: MGYNNWKNAISTFRDHEVNVTSIHNFAADKLELFKNPRQHVTLKISQHSSEMEVAYRVRLTAVLDIMQFLLRQGLAFRGHDESSSSKNKVRSLMIEDIGDRIFSLMVDEARYILVKEQMAIVLRYVDSRGQMIERFLCVEHVTDASSYTLKEVIDNLFAKYGLSLSRLRGQGYDGASNMRGEFNDLKSLILKDNPYASYVIKIVNLVGASRKRKDALRQSQHENIVTHIEKGVISTGRG
SIO_010081: LOC120251287
subclass of: SO_0000673
so part of: LOC120251287
location: complement(join(7678579..7678705,7678790..7679114,7679256..7679523))
location: region:7678579-7679523:-1
so has part: feature:7679256-7679523:-1:exon
so has part: feature:7678790-7679114:-1:exon
so has part: feature:7678579-7678705:-1:exon

XP_039115778.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7679256-7679523:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7678790-7679114:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7678579-7678705:-1:exon

LOC120252444
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252444
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(7714076..7714182)
location: region:7714076-7714182:-1
so has part: feature:7714076-7714182:-1:exon
subclass of: SO_0000578

120252444
type: Gene
SIO_000068: ncbigene

position:7714076:-1
position: 7714076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7714182:-1
position: 7714182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7714076-7714182:-1:exon

LOC120252444
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252444
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533975.1
SIO_010081: LOC120252444
subclass of: SO_0000673
so part of: LOC120252444
location: complement(7714076..7714182)
location: region:7714076-7714182:-1
so has part: feature:7714076-7714182:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7714076-7714182:-1:exon

LOC120252094
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252094
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 7736587..7736693
location: region:7736587-7736693:1
so has part: feature:7736587-7736693:1:exon
subclass of: SO_0000578

120252094
type: Gene
SIO_000068: ncbigene

position:7736587:1
position: 7736587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7736693:1
position: 7736693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7736587-7736693:1:exon

LOC120252094
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252094
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533643.1
SIO_010081: LOC120252094
subclass of: SO_0000673
so part of: LOC120252094
location: 7736587..7736693
location: region:7736587-7736693:1
so has part: feature:7736587-7736693:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7736587-7736693:1:exon

LOC120252108
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252108
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 7762692..7762798
location: region:7762692-7762798:1
so has part: feature:7762692-7762798:1:exon
subclass of: SO_0000578

120252108
type: Gene
SIO_000068: ncbigene

position:7762692:1
position: 7762692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7762798:1
position: 7762798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7762692-7762798:1:exon

LOC120252108
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252108
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533656.1
SIO_010081: LOC120252108
subclass of: SO_0000673
so part of: LOC120252108
location: 7762692..7762798
location: region:7762692-7762798:1
so has part: feature:7762692-7762798:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7762692-7762798:1:exon

LOC120252221
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252221
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(7796404..7796510)
location: region:7796404-7796510:-1
so has part: feature:7796404-7796510:-1:exon
subclass of: SO_0000578

120252221
type: Gene
SIO_000068: ncbigene

position:7796404:-1
position: 7796404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7796510:-1
position: 7796510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7796404-7796510:-1:exon

LOC120252221
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252221
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533763.1
SIO_010081: LOC120252221
subclass of: SO_0000673
so part of: LOC120252221
location: complement(7796404..7796510)
location: region:7796404-7796510:-1
so has part: feature:7796404-7796510:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7796404-7796510:-1:exon

LOC120252394
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252394
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(7823050..7823156)
location: region:7823050-7823156:-1
so has part: feature:7823050-7823156:-1:exon
subclass of: SO_0000578

120252394
type: Gene
SIO_000068: ncbigene

position:7823050:-1
position: 7823050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7823156:-1
position: 7823156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7823050-7823156:-1:exon

LOC120252394
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252394
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533927.1
SIO_010081: LOC120252394
subclass of: SO_0000673
so part of: LOC120252394
location: complement(7823050..7823156)
location: region:7823050-7823156:-1
so has part: feature:7823050-7823156:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7823050-7823156:-1:exon

LOC120252173
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252173
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(7908613..7908719)
location: region:7908613-7908719:-1
so has part: feature:7908613-7908719:-1:exon
subclass of: SO_0000578

120252173
type: Gene
SIO_000068: ncbigene

position:7908613:-1
position: 7908613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7908719:-1
position: 7908719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7908613-7908719:-1:exon

LOC120252173
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252173
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533717.1
SIO_010081: LOC120252173
subclass of: SO_0000673
so part of: LOC120252173
location: complement(7908613..7908719)
location: region:7908613-7908719:-1
so has part: feature:7908613-7908719:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7908613-7908719:-1:exon

LOC120252440
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252440
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(7968241..7968348)
location: region:7968241-7968348:-1
so has part: feature:7968241-7968348:-1:exon
subclass of: SO_0000578

120252440
type: Gene
SIO_000068: ncbigene

position:7968241:-1
position: 7968241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7968348:-1
position: 7968348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7968241-7968348:-1:exon

LOC120252440
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252440
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533970.1
SIO_010081: LOC120252440
subclass of: SO_0000673
so part of: LOC120252440
location: complement(7968241..7968348)
location: region:7968241-7968348:-1
so has part: feature:7968241-7968348:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7968241-7968348:-1:exon

TRNAR-ACG
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: TRNAR-ACG
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 8014793..8014871
location: region:8014793-8014871:1
so has part: feature:8014793-8014871:1:exon
subclass of: SO_0000663

120252473
type: Gene
SIO_000068: ncbigene

position:8014793:1
position: 8014793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8014871:1
position: 8014871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8014793-8014871:1:exon

TRNAR-ACG
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 55577
gene: TRNAR-ACG
product: tRNA-Arg
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA arginine (anticodon ACG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:8014832..8014834,aa:Arg,seq:acg)
SIO_010081: TRNAR-ACG
subclass of: SO_0000673
so part of: TRNAR-ACG
location: 8014793..8014871
location: region:8014793-8014871:1
so has part: feature:8014793-8014871:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8014793-8014871:1:exon

LOC120251130
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120251130
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8015290..8017725
location: region:8015290-8017725:1
so has part: feature:8015290-8017725:1:exon
subclass of: SO_0000010

120251130
type: Gene
SIO_000068: ncbigene

position:8015290:1
position: 8015290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8017725:1
position: 8017725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8015290-8017725:1:exon

LOC120251130
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 55577
gene: LOC120251130
product: putative protein TIC 214 N-terminal part
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_039259671.1
SIO_010081: LOC120251130
subclass of: SO_0000673
so part of: LOC120251130
location: 8015290..8017725
location: region:8015290-8017725:1
so has part: feature:8015290-8017725:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8015290-8017725:1:exon

TRNAN-GUU
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: TRNAN-GUU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(8015465..8015536)
location: region:8015465-8015536:-1
so has part: feature:8015465-8015536:-1:exon
subclass of: SO_0000663

120252466
type: Gene
SIO_000068: ncbigene

position:8015465:-1
position: 8015465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8015536:-1
position: 8015536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8015465-8015536:-1:exon

TRNAN-GUU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 55577
gene: TRNAN-GUU
product: tRNA-Asn
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA asparagine (anticodon GUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(8015502..8015504),aa:Asn, seq:gtt)
SIO_010081: TRNAN-GUU
subclass of: SO_0000673
so part of: TRNAN-GUU
location: complement(8015465..8015536)
location: region:8015465-8015536:-1
so has part: feature:8015465-8015536:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8015465-8015536:-1:exon

LOC120251130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 55577
gene: LOC120251130
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:8016267..8016269,aa:OTHER)
product: LOW QUALITY PROTEIN: putative protein TIC 214 N-terminal part
translation: MILKSFLLGNLLFLCIKIRNSVVVVGLYYGFLTTFSIGPSYLFLLRARVMEEGTEKEVSATTGFITGQLMMFISIYYAPLHLALGRPHTITVLVLPYLFFFLISSGTKKNFLDYGSTTRKKMRNLSIQCVFLNNLIXKLFNHFILPSSTLARLVNIYMFRCNNKMLFVTSSFVGWLIGHFLFMKWLGLVFIILDPDKIDETEEIRANGKEKTKDFHFIETC
SIO_010081: LOC120251130
subclass of: SO_0000673
so part of: LOC120251130
location: 8015859..8016524
location: region:8015859-8016524:1
so has part: feature:8015859-8016524:1:exon

XP_039115605.1
type: Protein
SIO_000068: ncbiprotein

position:8015859:1
position: 8015859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8016524:1
position: 8016524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8015859-8016524:1:exon

LOC120252257
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252257
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(8081296..8081402)
location: region:8081296-8081402:-1
so has part: feature:8081296-8081402:-1:exon
subclass of: SO_0000578

120252257
type: Gene
SIO_000068: ncbigene

position:8081296:-1
position: 8081296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8081402:-1
position: 8081402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8081296-8081402:-1:exon

LOC120252257
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252257
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533802.1
SIO_010081: LOC120252257
subclass of: SO_0000673
so part of: LOC120252257
location: complement(8081296..8081402)
location: region:8081296-8081402:-1
so has part: feature:8081296-8081402:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8081296-8081402:-1:exon

LOC120252003
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252003
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 8118644..8118750
location: region:8118644-8118750:1
so has part: feature:8118644-8118750:1:exon
subclass of: SO_0000578

120252003
type: Gene
SIO_000068: ncbigene

position:8118644:1
position: 8118644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8118750:1
position: 8118750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8118644-8118750:1:exon

LOC120252003
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252003
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533558.1
SIO_010081: LOC120252003
subclass of: SO_0000673
so part of: LOC120252003
location: 8118644..8118750
location: region:8118644-8118750:1
so has part: feature:8118644-8118750:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8118644-8118750:1:exon

LOC120252232
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120252232
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(8169370..8169476)
location: region:8169370-8169476:-1
so has part: feature:8169370-8169476:-1:exon
subclass of: SO_0000578

120252232
type: Gene
SIO_000068: ncbigene

position:8169370:-1
position: 8169370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8169476:-1
position: 8169476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8169370-8169476:-1:exon

LOC120252232
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: snoRNA
gene: LOC120252232
product: small nucleolar RNA R71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00097
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005533776.1
SIO_010081: LOC120252232
subclass of: SO_0000673
so part of: LOC120252232
location: complement(8169370..8169476)
location: region:8169370-8169476:-1
so has part: feature:8169370-8169476:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8169370-8169476:-1:exon

LOC120251500
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120251500
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8213240..8224642
location: region:8213240-8224642:1
so has part: feature:8213240-8224642:1:exon
subclass of: SO_0000010

120251500
type: Gene
SIO_000068: ncbigene

position:8213240:1
position: 8213240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8224642:1
position: 8224642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8213240-8224642:1:exon

LOC120251500
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 55577
gene: LOC120251500
product: uncharacterized LOC120251500, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XR_005533421.1
SIO_010081: LOC120251500
so part of: LOC120251500
location: join(8213240..8213380,8213457..8213533,8213650..8213712,8213916..8213999,8215863..8216004,8224247..8224299,8224488..8224642)
location: region:8213240-8224642:1
so has part: feature:8213240-8213380:1:exon
so has part: feature:8213457-8213533:1:exon
so has part: feature:8213650-8213712:1:exon
so has part: feature:8213916-8213999:1:exon
so has part: feature:8215863-8216004:1:exon
so has part: feature:8224247-8224299:1:exon
so has part: feature:8224488-8224642:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8213240-8213380:1:exon

position:8213380:1
position: 8213380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8213457-8213533:1:exon

position:8213457:1
position: 8213457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8213533:1
position: 8213533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8213650-8213712:1:exon

position:8213650:1
position: 8213650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8213712:1
position: 8213712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8213916-8213999:1:exon

position:8213916:1
position: 8213916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8213999:1
position: 8213999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8215863-8216004:1:exon

position:8215863:1
position: 8215863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8216004:1
position: 8216004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8224247-8224299:1:exon

position:8224247:1
position: 8224247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8224299:1
position: 8224299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8224488-8224642:1:exon

position:8224488:1
position: 8224488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120251500
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 55577
gene: LOC120251500
product: uncharacterized LOC120251500, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_039260024.1
SIO_010081: LOC120251500
subclass of: SO_0000673
so part of: LOC120251500
location: join(8213240..8213380,8213457..8213536,8213650..8213712,8213916..8213999,8215863..8216004,8220265..8221612)
location: region:8213240-8221612:1
so has part: feature:8213240-8213380:1:exon
so has part: feature:8213457-8213536:1:exon
so has part: feature:8213650-8213712:1:exon
so has part: feature:8213916-8213999:1:exon
so has part: feature:8215863-8216004:1:exon
so has part: feature:8220265-8221612:1:exon

position:8221612:1
position: 8221612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8213240-8213380:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8213457-8213536:1:exon

position:8213536:1
position: 8213536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8213650-8213712:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8213916-8213999:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8215863-8216004:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8220265-8221612:1:exon

position:8220265:1
position: 8220265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120251500
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 55577
gene: LOC120251500
product: uncharacterized LOC120251500, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_039260025.1
SIO_010081: LOC120251500
subclass of: SO_0000673
so part of: LOC120251500
location: join(8213240..8213380,8213457..8213536,8213650..8213712,8215863..8216004,8220265..8221612)
location: region:8213240-8221612:1
so has part: feature:8213240-8213380:1:exon
so has part: feature:8213457-8213536:1:exon
so has part: feature:8213650-8213712:1:exon
so has part: feature:8215863-8216004:1:exon
so has part: feature:8220265-8221612:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8213240-8213380:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8213457-8213536:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8213650-8213712:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8215863-8216004:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8220265-8221612:1:exon

LOC120251500
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 55577
gene: LOC120251500
product: uncharacterized LOC120251500, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_039260022.1
SIO_010081: LOC120251500
subclass of: SO_0000673
so part of: LOC120251500
location: join(8213240..8213380,8213457..8213533,8213650..8213712,8213916..8213999,8215863..8216004,8220265..8220347,8220413..8221612)
location: region:8213240-8221612:1
so has part: feature:8213240-8213380:1:exon
so has part: feature:8213457-8213533:1:exon
so has part: feature:8213650-8213712:1:exon
so has part: feature:8213916-8213999:1:exon
so has part: feature:8215863-8216004:1:exon
so has part: feature:8220265-8220347:1:exon
so has part: feature:8220413-8221612:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8213240-8213380:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8213457-8213533:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8213650-8213712:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8213916-8213999:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8215863-8216004:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8220265-8220347:1:exon

position:8220347:1
position: 8220347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8220413-8221612:1:exon

position:8220413:1
position: 8220413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120251500
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 55577
gene: LOC120251500
product: uncharacterized LOC120251500, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_039260023.1
SIO_010081: LOC120251500
subclass of: SO_0000673
so part of: LOC120251500
location: join(8213240..8213380,8213457..8213533,8213650..8213712,8215863..8216004,8220265..8221612)
location: region:8213240-8221612:1
so has part: feature:8213240-8213380:1:exon
so has part: feature:8213457-8213533:1:exon
so has part: feature:8213650-8213712:1:exon
so has part: feature:8215863-8216004:1:exon
so has part: feature:8220265-8221612:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8213240-8213380:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8213457-8213533:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8213650-8213712:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8215863-8216004:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8220265-8221612:1:exon

LOC120251500
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 55577
gene: LOC120251500
product: uncharacterized LOC120251500, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_039260026.1
SIO_010081: LOC120251500
subclass of: SO_0000673
so part of: LOC120251500
location: join(8213240..8213380,8213650..8213712,8213916..8213999,8215863..8216004,8220265..8221612)
location: region:8213240-8221612:1
so has part: feature:8213240-8213380:1:exon
so has part: feature:8213650-8213712:1:exon
so has part: feature:8213916-8213999:1:exon
so has part: feature:8215863-8216004:1:exon
so has part: feature:8220265-8221612:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8213240-8213380:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8213650-8213712:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8213916-8213999:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8215863-8216004:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8220265-8221612:1:exon

LOC120251500
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 55577
gene: LOC120251500
product: uncharacterized LOC120251500, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_039260027.1
SIO_010081: LOC120251500
subclass of: SO_0000673
so part of: LOC120251500
location: join(8213240..8213380,8213650..8213712,8215863..8216004,8220265..8221612)
location: region:8213240-8221612:1
so has part: feature:8213240-8213380:1:exon
so has part: feature:8213650-8213712:1:exon
so has part: feature:8215863-8216004:1:exon
so has part: feature:8220265-8221612:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8213240-8213380:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8213650-8213712:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8215863-8216004:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8220265-8221612:1:exon

LOC120251500
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 55577
gene: LOC120251500
product: uncharacterized LOC120251500, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_039260028.1
SIO_010081: LOC120251500
subclass of: SO_0000673
so part of: LOC120251500
location: join(8213242..8213380,8213457..8213533,8213650..8213712,8213916..8213999,8222722..8222880,8223123..8223210,8223287..8223958,8224247..8224299,8224488..8224642)
location: region:8213242-8224642:1
so has part: feature:8213242-8213380:1:exon
so has part: feature:8213457-8213533:1:exon
so has part: feature:8213650-8213712:1:exon
so has part: feature:8213916-8213999:1:exon
so has part: feature:8222722-8222880:1:exon
so has part: feature:8223123-8223210:1:exon
so has part: feature:8223287-8223958:1:exon
so has part: feature:8224247-8224299:1:exon
so has part: feature:8224488-8224642:1:exon

position:8213242:1
position: 8213242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8213242-8213380:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8213457-8213533:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8213650-8213712:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8213916-8213999:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8222722-8222880:1:exon

position:8222722:1
position: 8222722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8222880:1
position: 8222880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8223123-8223210:1:exon

position:8223123:1
position: 8223123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8223210:1
position: 8223210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8223287-8223958:1:exon

position:8223287:1
position: 8223287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8223958:1
position: 8223958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:8224247-8224299:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8224488-8224642:1:exon

LOC120251500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 55577
gene: LOC120251500
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC120251500 isoform X2
translation: MTWDQRMIYDCLRSHVPPMHESHCYDEAGPSVQPPLDELVLGLQSDEISQFSNRFFDILKAADQPLYVGCENHSKLSFVARMLSIKSDANMSEANFNTMVTNIKEVLPSDNTMPNDYYHHRKTMNELGLPVVKIDACKNGCMLYWKSDANEVFCKFCNEPRYKQLKSQRGVPDNRPCKRIAQAILRYLPLTPRLQRLYASNATTAHITWHATHERNDGVICHPSDAEAWKHFDKTYPDFAKEPRNIRLGLCADGFAPHGQFGKTYSCWPVIVTPYNLPLGMCMKSPYMFLSLICPGPKNPKEEHRCFFATFD
SIO_010081: LOC120251500
subclass of: SO_0000673
so part of: LOC120251500
location: 8220606..8221544
location: region:8220606-8221544:1
so has part: feature:8220606-8221544:1:exon

XP_039115956.1
type: Protein
SIO_000068: ncbiprotein

position:8220606:1
position: 8220606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8221544:1
position: 8221544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8220606-8221544:1:exon

LOC120251500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 55577
gene: LOC120251500
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC120251500 isoform X2
translation: MTWDQRMIYDCLRSHVPPMHESHCYDEAGPSVQPPLDELVLGLQSDEISQFSNRFFDILKAADQPLYVGCENHSKLSFVARMLSIKSDANMSEANFNTMVTNIKEVLPSDNTMPNDYYHHRKTMNELGLPVVKIDACKNGCMLYWKSDANEVFCKFCNEPRYKQLKSQRGVPDNRPCKRIAQAILRYLPLTPRLQRLYASNATTAHITWHATHERNDGVICHPSDAEAWKHFDKTYPDFAKEPRNIRLGLCADGFAPHGQFGKTYSCWPVIVTPYNLPLGMCMKSPYMFLSLICPGPKNPKEEHRCFFATFD
SIO_010081: LOC120251500
subclass of: SO_0000673
so part of: LOC120251500
location: 8220606..8221544
location: region:8220606-8221544:1
so has part: feature:8220606-8221544:1:exon

XP_039115957.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8220606-8221544:1:exon

LOC120251500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 55577
gene: LOC120251500
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC120251500 isoform X2
translation: MTWDQRMIYDCLRSHVPPMHESHCYDEAGPSVQPPLDELVLGLQSDEISQFSNRFFDILKAADQPLYVGCENHSKLSFVARMLSIKSDANMSEANFNTMVTNIKEVLPSDNTMPNDYYHHRKTMNELGLPVVKIDACKNGCMLYWKSDANEVFCKFCNEPRYKQLKSQRGVPDNRPCKRIAQAILRYLPLTPRLQRLYASNATTAHITWHATHERNDGVICHPSDAEAWKHFDKTYPDFAKEPRNIRLGLCADGFAPHGQFGKTYSCWPVIVTPYNLPLGMCMKSPYMFLSLICPGPKNPKEEHRCFFATFD
SIO_010081: LOC120251500
subclass of: SO_0000673
so part of: LOC120251500
location: 8220606..8221544
location: region:8220606-8221544:1
so has part: feature:8220606-8221544:1:exon

XP_039115958.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8220606-8221544:1:exon

LOC120251500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 55577
gene: LOC120251500
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC120251500 isoform X2
translation: MTWDQRMIYDCLRSHVPPMHESHCYDEAGPSVQPPLDELVLGLQSDEISQFSNRFFDILKAADQPLYVGCENHSKLSFVARMLSIKSDANMSEANFNTMVTNIKEVLPSDNTMPNDYYHHRKTMNELGLPVVKIDACKNGCMLYWKSDANEVFCKFCNEPRYKQLKSQRGVPDNRPCKRIAQAILRYLPLTPRLQRLYASNATTAHITWHATHERNDGVICHPSDAEAWKHFDKTYPDFAKEPRNIRLGLCADGFAPHGQFGKTYSCWPVIVTPYNLPLGMCMKSPYMFLSLICPGPKNPKEEHRCFFATFD
SIO_010081: LOC120251500
subclass of: SO_0000673
so part of: LOC120251500
location: 8220606..8221544
location: region:8220606-8221544:1
so has part: feature:8220606-8221544:1:exon

XP_039115959.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8220606-8221544:1:exon

LOC120251500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 55577
gene: LOC120251500
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC120251500 isoform X2
translation: MTWDQRMIYDCLRSHVPPMHESHCYDEAGPSVQPPLDELVLGLQSDEISQFSNRFFDILKAADQPLYVGCENHSKLSFVARMLSIKSDANMSEANFNTMVTNIKEVLPSDNTMPNDYYHHRKTMNELGLPVVKIDACKNGCMLYWKSDANEVFCKFCNEPRYKQLKSQRGVPDNRPCKRIAQAILRYLPLTPRLQRLYASNATTAHITWHATHERNDGVICHPSDAEAWKHFDKTYPDFAKEPRNIRLGLCADGFAPHGQFGKTYSCWPVIVTPYNLPLGMCMKSPYMFLSLICPGPKNPKEEHRCFFATFD
SIO_010081: LOC120251500
subclass of: SO_0000673
so part of: LOC120251500
location: 8220606..8221544
location: region:8220606-8221544:1
so has part: feature:8220606-8221544:1:exon

XP_039115960.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8220606-8221544:1:exon

LOC120251500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 55577
gene: LOC120251500
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC120251500 isoform X2
translation: MTWDQRMIYDCLRSHVPPMHESHCYDEAGPSVQPPLDELVLGLQSDEISQFSNRFFDILKAADQPLYVGCENHSKLSFVARMLSIKSDANMSEANFNTMVTNIKEVLPSDNTMPNDYYHHRKTMNELGLPVVKIDACKNGCMLYWKSDANEVFCKFCNEPRYKQLKSQRGVPDNRPCKRIAQAILRYLPLTPRLQRLYASNATTAHITWHATHERNDGVICHPSDAEAWKHFDKTYPDFAKEPRNIRLGLCADGFAPHGQFGKTYSCWPVIVTPYNLPLGMCMKSPYMFLSLICPGPKNPKEEHRCFFATFD
SIO_010081: LOC120251500
subclass of: SO_0000673
so part of: LOC120251500
location: 8220606..8221544
location: region:8220606-8221544:1
so has part: feature:8220606-8221544:1:exon

XP_039115961.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8220606-8221544:1:exon

LOC120251500
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 55577
gene: LOC120251500
product: uncharacterized LOC120251500, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_039260021.1
SIO_010081: LOC120251500
subclass of: SO_0000673
so part of: LOC120251500
location: join(8221738..8222636,8222722..8222880,8223123..8223210,8223287..8223958,8224247..8224299,8224488..8224642)
location: region:8221738-8224642:1
so has part: feature:8221738-8222636:1:exon
so has part: feature:8222722-8222880:1:exon
so has part: feature:8223123-8223210:1:exon
so has part: feature:8223287-8223958:1:exon
so has part: feature:8224247-8224299:1:exon
so has part: feature:8224488-8224642:1:exon

position:8221738:1
position: 8221738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8221738-8222636:1:exon

position:8222636:1
position: 8222636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8222722-8222880:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8223123-8223210:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8223287-8223958:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8224247-8224299:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8224488-8224642:1:exon

LOC120251500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 55577
gene: LOC120251500
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC120251500 isoform X1
translation: MEHLIVHLPYEARIGGPVQYRWMYPFERFLYDLKRTLKNKAHVEGSICQAYIAQEINILQNIILNLMYHVKGGDLHEMMRRIFVNYLQGNPVDAIDKSIDKHFPKWFENFVANEVNQVIDPLLQSLAWGPSMKATTWPGYFINGYNFHTVTHSMEKATMNSGICVQGSNVEDTCTDFYGLLQDVVQLEYYGNRWNRIVLFECTWFDPINGTRVHPIYNLVDVNRKKMYPKYDPFVLAQQAIQVNYIEYPSMKKDKVDWLAVCKTKARRMVEASWPGKDNTAYQMEEITSNPVVSILQEIPSLVDPQGIQQFVDLSEGLQDISESETEEDEEDEEIV
SIO_010081: LOC120251500
subclass of: SO_0000673
so part of: LOC120251500
location: join(8222554..8222636,8222722..8222880,8223123..8223210,8223287..8223958,8224247..8224255)
location: region:8222554-8224255:1
so has part: feature:8222554-8222636:1:exon
so has part: feature:8222722-8222880:1:exon
so has part: feature:8223123-8223210:1:exon
so has part: feature:8223287-8223958:1:exon
so has part: feature:8224247-8224255:1:exon

XP_039115955.1
type: Protein
SIO_000068: ncbiprotein

position:8222554:1
position: 8222554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8224255:1
position: 8224255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8222554-8222636:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8222722-8222880:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8223123-8223210:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8223287-8223958:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8224247-8224255:1:exon

LOC120251500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 55577
gene: LOC120251500
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC120251500 isoform X3
translation: MYHVKGGDLHEMMRRIFVNYLQGNPVDAIDKSIDKHFPKWFENFVANEVNQVIDPLLQSLAWGPSMKATTWPGYFINGYNFHTVTHSMEKATMNSGICVQGSNVEDTCTDFYGLLQDVVQLEYYGNRWNRIVLFECTWFDPINGTRVHPIYNLVDVNRKKMYPKYDPFVLAQQAIQVNYIEYPSMKKDKVDWLAVCKTKARRMVEASWPGKDNTAYQMEEITSNPVVSILQEIPSLVDPQGIQQFVDLSEGLQDISESETEEDEEDEEIV
SIO_010081: LOC120251500
subclass of: SO_0000673
so part of: LOC120251500
location: join(8222837..8222880,8223123..8223210,8223287..8223958,8224247..8224255)
location: region:8222837-8224255:1
so has part: feature:8222837-8222880:1:exon
so has part: feature:8223123-8223210:1:exon
so has part: feature:8223287-8223958:1:exon
so has part: feature:8224247-8224255:1:exon

XP_039115962.1
type: Protein
SIO_000068: ncbiprotein

position:8222837:1
position: 8222837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8222837-8222880:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8223123-8223210:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8223287-8223958:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8224247-8224255:1:exon

LOC120251501
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120251501
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8224815..8225420
location: region:8224815-8225420:1
so has part: feature:8224815-8225420:1:exon
subclass of: SO_0000011

120251501
type: Gene
SIO_000068: ncbigene

position:8224815:1
position: 8224815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8225420:1
position: 8225420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8224815-8225420:1:exon

LOC120251501
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 55577
nc RNA class: lncRNA
gene: LOC120251501
product: uncharacterized LOC120251501
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_005533423.1
SIO_010081: LOC120251501
subclass of: SO_0000673
so part of: LOC120251501
location: join(8224815..8224825,8224941..8225058,8225163..8225420)
location: region:8224815-8225420:1
so has part: feature:8224815-8224825:1:exon
so has part: feature:8224941-8225058:1:exon
so has part: feature:8225163-8225420:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8224815-8224825:1:exon

position:8224825:1
position: 8224825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8224941-8225058:1:exon

position:8224941:1
position: 8224941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8225058:1
position: 8225058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8225163-8225420:1:exon

position:8225163:1
position: 8225163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120251288
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120251288
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8225542..8226500
location: region:8225542-8226500:1
so has part: feature:8225542-8226500:1:exon
subclass of: SO_0000010

120251288
type: Gene
SIO_000068: ncbigene

position:8225542:1
position: 8225542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8226500:1
position: 8226500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8225542-8226500:1:exon

LOC120251288
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 55577
gene: LOC120251288
product: uncharacterized LOC120251288
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 57% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_039259845.1
SIO_010081: LOC120251288
subclass of: SO_0000673
so part of: LOC120251288
location: join(8225542..8225620,8225959..8226238,8226310..8226500)
location: region:8225542-8226500:1
so has part: feature:8225542-8225620:1:exon
so has part: feature:8225959-8226238:1:exon
so has part: feature:8226310-8226500:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8225542-8225620:1:exon

position:8225620:1
position: 8225620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8225959-8226238:1:exon

position:8225959:1
position: 8225959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8226238:1
position: 8226238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8226310-8226500:1:exon

position:8226310:1
position: 8226310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC120251288
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 55577
gene: LOC120251288
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC120251288
translation: MGRRMALSREQFDKALADKRDQGEDENSINQNELWDRIAVGSRNRVLGKGNISRKMSSINYKPRSGPSQSSGQLYDQIKELQAELAKKPKLSIMQCLPSMIRSLRLKGIDLSDMHVATLTRSIPRAPTVEAQSHVDEHSPMRKRPRTTLVADNTLDGLNDEEDIC
SIO_010081: LOC120251288
subclass of: SO_0000673
so part of: LOC120251288
location: join(8225594..8225620,8225959..8226238,8226310..8226500)
location: region:8225594-8226500:1
so has part: feature:8225594-8225620:1:exon
so has part: feature:8225959-8226238:1:exon
so has part: feature:8226310-8226500:1:exon

XP_039115779.1
type: Protein
SIO_000068: ncbiprotein

position:8225594:1
position: 8225594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8225594-8225620:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8225959-8226238:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8226310-8226500:1:exon

LOC120251289
type: Gene
subclass of: SO_0000704
RO_0002162: 55577
gene: LOC120251289
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8226303..8229241
location: region:8226303-8229241:1
so has part: feature:8226303-8229241:1:exon
subclass of: SO_0000010

120251289
type: Gene
SIO_000068: ncbigene

position:8226303:1
position: 8226303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8229241:1
position: 8229241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8226303-8229241:1:exon

LOC120251289
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 55577
gene: LOC120251289
product: UTP--glucose-1-phosphate uridylyltransferase 3, chloroplastic-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 87% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_039259846.1
SIO_010081: LOC120251289
subclass of: SO_0000673
so part of: LOC120251289
location: join(8226303..8226637,8226721..8226816,8227028..8227102,8227182..8227273,8227360..8227522,8227599..8227679,8229155..8229241)
location: region:8226303-8229241:1
so has part: feature:8226303-8226637:1:exon
so has part: feature:8226721-8226816:1:exon
so has part: feature:8227028-8227102:1:exon
so has part: feature:8227182-8227273:1:exon
so has part: feature:8227360-8227522:1:exon
so has part: feature:8227599-8227679:1:exon
so has part: feature:8229155-8229241:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8226303-8226637:1:exon

position:8226637:1
position: 8226637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8226721-8226816:1:exon

position:8226721:1
position: 8226721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8226816:1
position: 8226816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8227028-8227102:1:exon

position:8227028:1
position: 8227028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8227102:1
position: 8227102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8227182-8227273:1:exon

position:8227182:1
position: 8227182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8227273:1
position: 8227273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8227360-8227522:1:exon

position:8227360:1
position: 8227360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8227522:1
position: 8227522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8227599-8227679:1:exon